Query 022564
Match_columns 295
No_of_seqs 262 out of 2662
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 07:31:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 1.6E-46 5.4E-51 338.6 21.1 263 24-286 32-295 (490)
2 1rv3_A Serine hydroxymethyltra 100.0 1.7E-39 5.7E-44 304.5 22.6 258 18-275 16-273 (483)
3 2a7v_A Serine hydroxymethyltra 100.0 3.2E-39 1.1E-43 301.4 19.6 252 24-275 32-283 (490)
4 3h7f_A Serine hydroxymethyltra 100.0 2.9E-32 9.9E-37 252.9 21.3 248 21-277 20-267 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 7.2E-32 2.5E-36 247.0 20.6 241 26-276 5-246 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 1E-30 3.5E-35 239.4 19.9 242 21-272 3-246 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 3.2E-30 1.1E-34 236.5 19.7 245 20-273 6-250 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 7.6E-29 2.6E-33 226.1 20.9 242 26-276 3-244 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 1E-28 3.5E-33 225.4 20.7 239 29-276 6-245 (407)
10 3zrp_A Serine-pyruvate aminotr 99.9 1.4E-23 4.6E-28 189.6 16.3 199 49-276 4-208 (384)
11 2dr1_A PH1308 protein, 386AA l 99.9 8.9E-23 3.1E-27 184.4 19.7 198 52-277 25-228 (386)
12 4hvk_A Probable cysteine desul 99.9 8.8E-24 3E-28 190.3 12.6 199 55-274 9-215 (382)
13 2huf_A Alanine glyoxylate amin 99.9 5E-23 1.7E-27 186.8 17.7 204 47-277 19-226 (393)
14 3nnk_A Ureidoglycine-glyoxylat 99.9 6.2E-23 2.1E-27 187.1 18.2 204 48-278 14-221 (411)
15 3isl_A Purine catabolism prote 99.9 8.7E-23 3E-27 186.5 18.9 203 48-278 12-219 (416)
16 3lvm_A Cysteine desulfurase; s 99.9 2.6E-23 9E-28 190.6 15.4 214 44-276 19-243 (423)
17 1vjo_A Alanine--glyoxylate ami 99.9 8.3E-23 2.8E-27 185.4 18.0 202 49-277 36-241 (393)
18 2z9v_A Aspartate aminotransfer 99.9 1.1E-22 3.6E-27 184.6 16.4 200 49-276 10-215 (392)
19 3kgw_A Alanine-glyoxylate amin 99.9 1.6E-22 5.6E-27 183.0 17.5 204 48-278 24-231 (393)
20 1eg5_A Aminotransferase; PLP-d 99.9 1E-22 3.5E-27 183.7 16.1 205 50-274 4-219 (384)
21 1iug_A Putative aspartate amin 99.9 3E-23 1E-27 185.3 12.4 195 49-275 3-203 (352)
22 2ch1_A 3-hydroxykynurenine tra 99.9 2.3E-22 8E-27 182.5 18.0 203 48-277 19-225 (396)
23 1kmj_A Selenocysteine lyase; p 99.9 5.6E-23 1.9E-27 186.9 13.8 212 48-277 24-245 (406)
24 4eb5_A Probable cysteine desul 99.9 5.2E-23 1.8E-27 185.7 13.0 198 56-274 10-215 (382)
25 3f0h_A Aminotransferase; RER07 99.9 1.4E-22 4.9E-27 182.7 15.6 206 47-279 19-228 (376)
26 1t3i_A Probable cysteine desul 99.9 6.5E-23 2.2E-27 187.4 13.2 210 48-277 29-250 (420)
27 2yrr_A Aminotransferase, class 99.9 1.1E-22 3.7E-27 181.4 13.6 199 49-277 2-206 (353)
28 3f9t_A TDC, L-tyrosine decarbo 99.9 8E-22 2.7E-26 178.4 19.3 203 50-274 34-263 (397)
29 3vax_A Putative uncharacterize 99.9 3.7E-23 1.3E-27 188.1 10.5 205 47-272 20-235 (400)
30 3cai_A Possible aminotransfera 99.9 3.8E-23 1.3E-27 188.5 10.4 211 48-276 27-245 (406)
31 1elu_A L-cysteine/L-cystine C- 99.9 3.8E-22 1.3E-26 180.6 16.2 214 47-277 16-240 (390)
32 3hvy_A Cystathionine beta-lyas 99.9 2.8E-22 9.6E-27 184.2 15.2 226 29-277 15-266 (427)
33 2bkw_A Alanine-glyoxylate amin 99.9 7.4E-22 2.5E-26 178.3 17.5 202 47-276 5-220 (385)
34 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.6E-22 5.5E-27 181.9 11.9 209 47-277 8-229 (371)
35 1gd9_A Aspartate aminotransfer 99.9 6.5E-22 2.2E-26 179.4 15.7 229 26-276 6-253 (389)
36 1o4s_A Aspartate aminotransfer 99.9 3.9E-22 1.3E-26 181.3 14.2 234 21-276 12-266 (389)
37 3i16_A Aluminum resistance pro 99.9 4.8E-22 1.6E-26 182.6 14.6 227 33-278 21-267 (427)
38 1m32_A 2-aminoethylphosphonate 99.9 7.9E-22 2.7E-26 176.7 15.7 203 48-277 5-213 (366)
39 1b5p_A Protein (aspartate amin 99.9 1.3E-21 4.4E-26 177.6 16.5 232 23-276 4-254 (385)
40 3a9z_A Selenocysteine lyase; P 99.9 2.6E-22 8.8E-27 184.6 11.9 214 47-274 18-262 (432)
41 3ele_A Amino transferase; RER0 99.9 5.7E-21 1.9E-25 173.7 18.7 211 46-275 35-267 (398)
42 2dgk_A GAD-beta, GADB, glutama 99.9 5.4E-21 1.9E-25 177.3 18.5 197 57-273 53-278 (452)
43 1j32_A Aspartate aminotransfer 99.9 3.5E-21 1.2E-25 174.5 16.7 209 46-276 30-257 (388)
44 3h14_A Aminotransferase, class 99.9 8.9E-21 3.1E-25 172.1 19.2 208 46-277 31-251 (391)
45 3e9k_A Kynureninase; kynurenin 99.9 1.9E-22 6.6E-27 187.6 8.3 174 93-276 112-296 (465)
46 1svv_A Threonine aldolase; str 99.9 7.7E-21 2.6E-25 169.9 17.1 204 47-276 14-234 (359)
47 2o0r_A RV0858C (N-succinyldiam 99.9 4.3E-21 1.5E-25 175.5 15.7 233 24-276 4-253 (411)
48 1yiz_A Kynurenine aminotransfe 99.9 5E-21 1.7E-25 175.9 16.0 250 1-277 1-276 (429)
49 3vp6_A Glutamate decarboxylase 99.9 9.2E-21 3.2E-25 178.4 18.0 177 84-273 127-332 (511)
50 1v2d_A Glutamine aminotransfer 99.9 3.9E-21 1.3E-25 173.9 14.9 225 24-277 4-243 (381)
51 3hbx_A GAD 1, glutamate decarb 99.9 1.4E-20 4.9E-25 176.8 18.8 199 56-273 66-293 (502)
52 3jzl_A Putative cystathionine 99.9 3.2E-21 1.1E-25 176.5 13.8 201 60-278 32-250 (409)
53 2z61_A Probable aspartate amin 99.9 2E-20 6.9E-25 168.5 18.6 201 46-276 29-242 (370)
54 1xi9_A Putative transaminase; 99.9 3.3E-21 1.1E-25 176.0 13.5 206 46-272 38-263 (406)
55 3kki_A CAI-1 autoinducer synth 99.9 2.9E-20 1E-24 169.9 19.8 223 28-277 24-274 (409)
56 3dzz_A Putative pyridoxal 5'-p 99.9 3.4E-21 1.2E-25 174.5 13.3 209 47-276 28-255 (391)
57 1u08_A Hypothetical aminotrans 99.9 1E-20 3.5E-25 171.4 16.4 231 24-276 9-256 (386)
58 2x5d_A Probable aminotransfera 99.9 7.8E-21 2.7E-25 173.9 15.5 233 23-276 10-265 (412)
59 3ffh_A Histidinol-phosphate am 99.9 1.2E-20 4.1E-25 169.5 16.4 226 23-278 6-247 (363)
60 3ju7_A Putative PLP-dependent 99.9 5.6E-21 1.9E-25 173.3 14.1 196 49-273 5-206 (377)
61 3ffr_A Phosphoserine aminotran 99.9 3.9E-21 1.3E-25 172.0 12.6 202 47-276 4-210 (362)
62 2dou_A Probable N-succinyldiam 99.8 5.8E-21 2E-25 172.5 13.3 226 30-276 4-250 (376)
63 3nra_A Aspartate aminotransfer 99.8 2E-20 7E-25 170.3 16.6 211 48-276 41-273 (407)
64 3get_A Histidinol-phosphate am 99.8 4.3E-21 1.5E-25 172.6 11.5 203 46-277 30-248 (365)
65 2o1b_A Aminotransferase, class 99.8 1.7E-21 5.8E-26 178.0 8.9 236 20-276 19-273 (404)
66 2w8t_A SPT, serine palmitoyltr 99.8 5.8E-20 2E-24 169.1 19.1 205 48-279 66-284 (427)
67 3dr4_A Putative perosamine syn 99.8 5.8E-21 2E-25 173.5 11.9 197 47-273 23-221 (391)
68 1b9h_A AHBA synthase, protein 99.8 2.1E-20 7.1E-25 169.5 15.5 186 59-273 16-203 (388)
69 2jis_A Cysteine sulfinic acid 99.8 2.2E-20 7.5E-25 176.0 16.2 175 84-273 140-343 (515)
70 3tqx_A 2-amino-3-ketobutyrate 99.8 1.1E-20 3.6E-25 171.7 13.5 204 48-277 45-264 (399)
71 3jtx_A Aminotransferase; NP_28 99.8 2E-20 6.7E-25 169.9 15.2 230 25-277 4-266 (396)
72 3ly1_A Putative histidinol-pho 99.8 4E-20 1.4E-24 165.4 16.7 203 47-278 17-235 (354)
73 3fvs_A Kynurenine--oxoglutarat 99.8 6.9E-21 2.4E-25 174.4 11.9 238 23-276 6-267 (422)
74 3b46_A Aminotransferase BNA3; 99.8 6.6E-21 2.3E-25 176.4 11.7 226 30-276 33-295 (447)
75 3euc_A Histidinol-phosphate am 99.8 4.1E-20 1.4E-24 166.3 16.5 205 47-278 31-248 (367)
76 2zc0_A Alanine glyoxylate tran 99.8 6.1E-20 2.1E-24 167.4 17.8 233 22-276 6-266 (407)
77 1fc4_A 2-amino-3-ketobutyrate 99.8 2E-20 7E-25 170.2 14.1 205 47-277 46-266 (401)
78 3ht4_A Aluminum resistance pro 99.8 2.4E-20 8.3E-25 171.8 14.3 176 93-277 66-255 (431)
79 2c81_A Glutamine-2-deoxy-scyll 99.8 3.2E-20 1.1E-24 170.2 15.1 196 56-274 12-209 (418)
80 2okj_A Glutamate decarboxylase 99.8 3.5E-20 1.2E-24 174.2 15.6 174 85-273 125-329 (504)
81 2gb3_A Aspartate aminotransfer 99.8 2E-20 6.8E-25 171.1 13.6 207 46-276 43-265 (409)
82 3aow_A Putative uncharacterize 99.8 3.7E-20 1.3E-24 171.6 15.5 239 16-276 47-308 (448)
83 3mc6_A Sphingosine-1-phosphate 99.8 1.2E-20 4.1E-25 176.9 12.1 200 58-275 76-298 (497)
84 4dq6_A Putative pyridoxal phos 99.8 1.7E-20 5.9E-25 169.8 12.7 221 31-276 18-259 (391)
85 1bs0_A Protein (8-amino-7-oxon 99.8 5.5E-20 1.9E-24 166.4 15.9 203 47-276 40-253 (384)
86 3dyd_A Tyrosine aminotransfera 99.8 6E-20 2.1E-24 169.0 16.1 201 47-272 55-279 (427)
87 1o69_A Aminotransferase; struc 99.8 1.1E-19 3.6E-24 165.6 17.4 193 54-276 6-203 (394)
88 3mad_A Sphingosine-1-phosphate 99.8 5E-20 1.7E-24 173.5 15.7 176 86-275 133-330 (514)
89 2fnu_A Aminotransferase; prote 99.8 5.4E-20 1.8E-24 165.6 15.0 184 54-271 7-195 (375)
90 3g0t_A Putative aminotransfera 99.8 1.5E-19 5.3E-24 166.2 17.7 211 46-276 44-280 (437)
91 3kax_A Aminotransferase, class 99.8 2.6E-20 9.1E-25 168.1 12.2 208 47-276 25-251 (383)
92 3a2b_A Serine palmitoyltransfe 99.8 5.7E-20 2E-24 167.2 14.4 204 47-277 44-261 (398)
93 3e2y_A Kynurenine-oxoglutarate 99.8 1E-20 3.5E-25 172.6 9.3 231 26-276 4-260 (410)
94 3p1t_A Putative histidinol-pho 99.8 1.1E-19 3.7E-24 161.4 15.8 200 44-278 14-220 (337)
95 3cq5_A Histidinol-phosphate am 99.8 2.9E-19 1E-23 161.0 18.4 211 48-278 32-253 (369)
96 1wyu_B Glycine dehydrogenase s 99.8 1E-19 3.4E-24 169.9 15.5 206 49-278 69-292 (474)
97 3l8a_A METC, putative aminotra 99.8 4E-20 1.4E-24 169.7 12.6 210 46-276 61-289 (421)
98 4e1o_A HDC, histidine decarbox 99.8 9.9E-20 3.4E-24 170.2 15.4 180 84-274 110-326 (481)
99 1mdo_A ARNB aminotransferase; 99.8 7.8E-20 2.7E-24 165.8 14.2 194 47-276 9-207 (393)
100 1js3_A DDC;, DOPA decarboxylas 99.8 5.9E-20 2E-24 171.8 13.6 196 59-273 87-319 (486)
101 3ezs_A Aminotransferase ASPB; 99.8 7.1E-20 2.4E-24 165.1 13.7 222 31-277 5-252 (376)
102 2qma_A Diaminobutyrate-pyruvat 99.8 1.3E-19 4.3E-24 170.1 15.9 198 57-274 111-342 (497)
103 3b8x_A WBDK, pyridoxamine 5-ph 99.8 3.1E-19 1.1E-23 162.0 17.3 192 49-272 4-204 (390)
104 1c7n_A Cystalysin; transferase 99.8 9.4E-20 3.2E-24 165.7 13.8 208 47-276 32-259 (399)
105 1qz9_A Kynureninase; kynurenin 99.8 5.6E-20 1.9E-24 168.0 12.2 203 48-276 29-247 (416)
106 3frk_A QDTB; aminotransferase, 99.8 1.9E-20 6.4E-25 169.0 8.8 193 49-273 6-202 (373)
107 2z67_A O-phosphoseryl-tRNA(SEC 99.8 1.8E-20 6E-25 174.1 8.5 168 90-272 131-313 (456)
108 3nyt_A Aminotransferase WBPE; 99.8 1.8E-20 6.1E-25 169.0 8.2 193 49-273 5-201 (367)
109 1jg8_A L-ALLO-threonine aldola 99.8 3.9E-20 1.3E-24 165.1 9.8 203 47-275 4-220 (347)
110 1qgn_A Protein (cystathionine 99.8 3E-19 1E-23 165.1 15.7 162 93-276 115-282 (445)
111 1d2f_A MALY protein; aminotran 99.8 3.3E-19 1.1E-23 161.7 15.5 208 47-276 29-254 (390)
112 3if2_A Aminotransferase; YP_26 99.8 1.6E-19 5.4E-24 166.7 13.4 222 46-277 31-296 (444)
113 3k40_A Aromatic-L-amino-acid d 99.8 1.2E-19 3.9E-24 169.5 12.5 178 84-274 105-319 (475)
114 1vp4_A Aminotransferase, putat 99.8 1.3E-20 4.5E-25 173.2 6.0 208 46-276 43-279 (425)
115 3tcm_A Alanine aminotransferas 99.8 5.3E-19 1.8E-23 166.0 16.7 214 46-276 95-341 (500)
116 2oga_A Transaminase; PLP-depen 99.8 9.8E-20 3.4E-24 166.0 11.4 197 47-275 31-232 (399)
117 1v72_A Aldolase; PLP-dependent 99.8 2.9E-19 9.7E-24 159.6 14.1 203 47-276 8-230 (356)
118 3qm2_A Phosphoserine aminotran 99.8 7E-21 2.4E-25 172.8 3.5 204 47-276 27-240 (386)
119 2aeu_A Hypothetical protein MJ 99.8 4.4E-19 1.5E-23 160.6 15.4 190 47-277 29-227 (374)
120 3fdb_A Beta C-S lyase, putativ 99.8 5.9E-19 2E-23 159.0 16.0 204 46-276 23-244 (377)
121 3uwc_A Nucleotide-sugar aminot 99.8 1.2E-19 4.1E-24 163.5 11.3 192 47-273 7-203 (374)
122 2po3_A 4-dehydrase; external a 99.8 4.9E-19 1.7E-23 162.6 15.4 192 50-275 20-218 (424)
123 1iay_A ACC synthase 2, 1-amino 99.8 5.6E-19 1.9E-23 162.3 15.8 217 47-276 37-289 (428)
124 3qgu_A LL-diaminopimelate amin 99.8 7E-19 2.4E-23 162.6 16.1 206 47-276 70-302 (449)
125 1bw0_A TAT, protein (tyrosine 99.8 1E-18 3.6E-23 159.7 17.1 207 47-273 34-270 (416)
126 2c0r_A PSAT, phosphoserine ami 99.8 1.4E-19 4.8E-24 162.5 10.9 205 47-278 4-217 (362)
127 2fq6_A Cystathionine beta-lyas 99.8 1.3E-19 4.6E-24 166.1 11.0 160 95-276 85-251 (415)
128 3ei9_A LL-diaminopimelate amin 99.8 5.3E-19 1.8E-23 162.6 14.5 239 22-274 25-288 (432)
129 2zyj_A Alpha-aminodipate amino 99.8 3.8E-19 1.3E-23 161.8 13.3 229 19-276 6-257 (397)
130 4f4e_A Aromatic-amino-acid ami 99.8 1.2E-18 4.2E-23 159.8 15.3 230 24-270 25-283 (420)
131 2rfv_A Methionine gamma-lyase; 99.8 5.3E-19 1.8E-23 161.2 12.5 163 92-276 64-231 (398)
132 3rq1_A Aminotransferase class 99.8 4.2E-18 1.4E-22 155.9 18.5 229 28-277 15-286 (418)
133 3op7_A Aminotransferase class 99.8 5.1E-19 1.7E-23 159.5 12.1 172 88-278 63-244 (375)
134 3ihj_A Alanine aminotransferas 99.8 1.6E-18 5.6E-23 162.6 15.9 201 59-276 103-340 (498)
135 3ndn_A O-succinylhomoserine su 99.8 8.2E-19 2.8E-23 160.9 13.2 161 93-275 82-247 (414)
136 3ke3_A Putative serine-pyruvat 99.8 3.8E-19 1.3E-23 161.1 10.6 175 88-278 31-220 (379)
137 3m5u_A Phosphoserine aminotran 99.8 2.9E-19 9.8E-24 160.8 9.6 201 47-278 5-214 (361)
138 3e77_A Phosphoserine aminotran 99.8 9.9E-20 3.4E-24 164.5 6.4 198 53-277 19-226 (377)
139 2r2n_A Kynurenine/alpha-aminoa 99.8 6.6E-19 2.2E-23 161.9 11.9 244 19-276 3-282 (425)
140 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 2.5E-18 8.5E-23 158.6 15.8 189 54-274 37-236 (437)
141 1gc0_A Methionine gamma-lyase; 99.8 9.2E-19 3.2E-23 159.6 12.4 161 93-275 66-231 (398)
142 2vyc_A Biodegradative arginine 99.8 1.9E-18 6.5E-23 169.2 14.9 163 96-273 209-402 (755)
143 1pff_A Methionine gamma-lyase; 99.8 3.8E-19 1.3E-23 157.8 9.1 159 97-277 3-168 (331)
144 1cs1_A CGS, protein (cystathio 99.8 2.2E-18 7.5E-23 156.4 14.2 160 95-276 55-220 (386)
145 3ri6_A O-acetylhomoserine sulf 99.8 7.9E-19 2.7E-23 161.7 11.3 157 95-273 85-246 (430)
146 3piu_A 1-aminocyclopropane-1-c 99.8 4.6E-18 1.6E-22 156.6 16.4 214 47-273 39-290 (435)
147 1lc5_A COBD, L-threonine-O-3-p 99.8 4.3E-18 1.5E-22 153.0 15.8 199 47-276 25-237 (364)
148 3cog_A Cystathionine gamma-lya 99.8 1.7E-18 5.8E-23 158.3 13.2 157 96-275 71-234 (403)
149 2x3l_A ORN/Lys/Arg decarboxyla 99.8 2.5E-19 8.5E-24 165.9 7.3 162 95-276 60-230 (446)
150 3ez1_A Aminotransferase MOCR f 99.8 1.5E-18 5.1E-23 159.1 12.3 227 25-277 5-273 (423)
151 2cb1_A O-acetyl homoserine sul 99.8 1E-17 3.5E-22 153.4 17.9 156 94-272 58-218 (412)
152 1w23_A Phosphoserine aminotran 99.8 1.5E-19 5.2E-24 161.9 5.4 199 47-276 3-214 (360)
153 3qhx_A Cystathionine gamma-syn 99.8 3.1E-18 1.1E-22 156.0 14.0 160 94-275 68-233 (392)
154 3t18_A Aminotransferase class 99.8 4.3E-18 1.5E-22 155.6 14.6 227 30-277 16-285 (413)
155 1e5e_A MGL, methionine gamma-l 99.8 1.6E-18 5.5E-23 158.5 11.6 159 96-276 66-230 (404)
156 7aat_A Aspartate aminotransfer 99.8 8.3E-18 2.8E-22 153.0 16.2 223 28-270 8-264 (401)
157 3ftb_A Histidinol-phosphate am 99.8 9E-18 3.1E-22 150.3 16.0 199 46-278 26-238 (361)
158 1c4k_A Protein (ornithine deca 99.8 1.7E-18 5.9E-23 168.3 12.2 165 95-274 176-372 (730)
159 1ibj_A CBL, cystathionine beta 99.8 3.2E-18 1.1E-22 159.1 13.3 201 47-275 90-299 (464)
160 3acz_A Methionine gamma-lyase; 99.8 2.1E-18 7.3E-23 156.8 11.9 160 95-276 62-227 (389)
161 3pj0_A LMO0305 protein; struct 99.8 3.9E-19 1.3E-23 159.3 6.7 202 47-277 14-227 (359)
162 3hdo_A Histidinol-phosphate am 99.8 3.7E-18 1.3E-22 153.2 12.6 197 47-277 27-235 (360)
163 3k7y_A Aspartate aminotransfer 99.8 3E-17 1E-21 150.0 18.5 228 22-270 4-263 (405)
164 2bwn_A 5-aminolevulinate synth 99.8 7.7E-18 2.6E-22 153.2 14.4 202 48-276 48-265 (401)
165 3g7q_A Valine-pyruvate aminotr 99.8 3.6E-18 1.2E-22 156.0 12.2 242 19-277 4-270 (417)
166 1n8p_A Cystathionine gamma-lya 99.8 2.9E-18 9.9E-23 156.2 11.0 159 94-276 57-225 (393)
167 1fg7_A Histidinol phosphate am 99.8 4.6E-18 1.6E-22 152.7 12.0 194 47-277 30-235 (356)
168 2ctz_A O-acetyl-L-homoserine s 99.8 5.9E-18 2E-22 155.5 13.0 155 95-271 61-221 (421)
169 3fsl_A Aromatic-amino-acid ami 99.7 3.5E-17 1.2E-21 148.4 17.3 228 27-271 5-262 (397)
170 3ppl_A Aspartate aminotransfer 99.7 7.8E-18 2.7E-22 154.7 12.9 226 27-277 15-280 (427)
171 3d6k_A Putative aminotransfera 99.7 5.4E-18 1.8E-22 155.6 11.2 230 23-276 10-277 (422)
172 3asa_A LL-diaminopimelate amin 99.7 2.1E-17 7.1E-22 150.5 15.0 202 47-274 34-254 (400)
173 2zy4_A L-aspartate beta-decarb 99.7 5.4E-18 1.8E-22 160.7 10.4 228 25-276 72-336 (546)
174 2x5f_A Aspartate_tyrosine_phen 99.7 4.3E-18 1.5E-22 156.5 8.9 211 46-276 47-294 (430)
175 1wyu_A Glycine dehydrogenase ( 99.7 1.6E-17 5.5E-22 153.3 12.6 169 88-277 104-281 (438)
176 3lws_A Aromatic amino acid bet 99.7 6.6E-18 2.3E-22 151.2 9.8 203 49-277 13-225 (357)
177 1yaa_A Aspartate aminotransfer 99.7 1.4E-17 4.8E-22 152.1 11.7 225 25-269 6-267 (412)
178 2ez2_A Beta-tyrosinase, tyrosi 99.7 6.6E-17 2.3E-21 149.6 16.4 186 58-275 56-275 (456)
179 3f6t_A Aspartate aminotransfer 99.7 1.1E-17 3.6E-22 158.3 11.1 207 48-273 105-330 (533)
180 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 2.6E-18 8.8E-23 157.4 6.5 175 88-273 94-282 (450)
181 3b1d_A Betac-S lyase; HET: PLP 99.6 3E-19 1E-23 162.2 0.0 210 47-277 32-260 (392)
182 1ajs_A Aspartate aminotransfer 99.7 6.5E-17 2.2E-21 147.6 14.8 230 24-273 6-278 (412)
183 3n75_A LDC, lysine decarboxyla 99.7 1.7E-17 6E-22 160.3 10.9 162 96-274 199-384 (715)
184 3meb_A Aspartate aminotransfer 99.7 2.7E-16 9.2E-21 145.5 18.2 229 20-270 22-293 (448)
185 2ay1_A Aroat, aromatic amino a 99.7 8.3E-17 2.8E-21 145.9 13.9 222 27-270 5-257 (394)
186 2q7w_A Aspartate aminotransfer 99.7 8.8E-17 3E-21 145.8 14.0 206 46-270 26-260 (396)
187 4eu1_A Mitochondrial aspartate 99.7 1.2E-16 4E-21 145.9 14.6 229 17-268 10-270 (409)
188 3nmy_A Xometc, cystathionine g 99.7 4.5E-17 1.5E-21 148.7 11.3 155 96-272 71-231 (400)
189 1ax4_A Tryptophanase; tryptoph 99.7 3.2E-17 1.1E-21 152.1 10.3 190 60-275 55-285 (467)
190 2eh6_A Acoat, acetylornithine 99.7 1.7E-16 5.9E-21 142.8 12.7 208 47-278 29-262 (375)
191 1vef_A Acetylornithine/acetyl- 99.7 8.5E-17 2.9E-21 146.0 10.3 202 47-278 46-275 (395)
192 3fkd_A L-threonine-O-3-phospha 99.7 2.1E-16 7.2E-21 141.1 12.3 195 46-279 15-220 (350)
193 1uu1_A Histidinol-phosphate am 99.7 1E-16 3.6E-21 142.4 9.8 194 47-277 20-223 (335)
194 2oqx_A Tryptophanase; lyase, p 99.7 6E-17 2E-21 150.3 8.5 189 60-273 53-281 (467)
195 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.9E-17 6.3E-22 150.4 3.8 172 90-273 114-300 (501)
196 1s0a_A Adenosylmethionine-8-am 99.7 2.1E-15 7.3E-20 138.5 16.8 219 47-280 44-298 (429)
197 2fyf_A PSAT, phosphoserine ami 99.6 3.3E-16 1.1E-20 142.5 9.6 194 47-276 40-241 (398)
198 3ruy_A Ornithine aminotransfer 99.6 1.1E-15 3.7E-20 138.5 12.5 195 58-277 53-272 (392)
199 2eo5_A 419AA long hypothetical 99.6 6.4E-15 2.2E-19 135.0 17.2 211 47-275 43-300 (419)
200 4h51_A Aspartate aminotransfer 99.6 4.5E-15 1.6E-19 136.0 14.9 240 18-276 16-285 (420)
201 4adb_A Succinylornithine trans 99.6 6.4E-15 2.2E-19 133.9 11.5 194 58-278 56-273 (406)
202 3nx3_A Acoat, acetylornithine 99.6 4.4E-14 1.5E-18 128.1 15.3 205 47-278 37-270 (395)
203 1sff_A 4-aminobutyrate aminotr 99.6 2.3E-14 7.9E-19 131.1 13.3 206 57-278 57-289 (426)
204 2ord_A Acoat, acetylornithine 99.6 7.8E-14 2.7E-18 126.6 15.6 195 48-275 42-270 (397)
205 3dxv_A Alpha-amino-epsilon-cap 99.5 4.4E-14 1.5E-18 130.0 13.8 214 47-278 44-291 (439)
206 2oat_A Ornithine aminotransfer 99.5 3.8E-14 1.3E-18 130.7 12.5 195 58-279 93-315 (439)
207 3a8u_X Omega-amino acid--pyruv 99.5 8.6E-14 3E-18 128.5 14.0 205 58-279 67-311 (449)
208 3i4j_A Aminotransferase, class 99.5 9.8E-14 3.4E-18 127.4 14.0 207 58-279 46-284 (430)
209 1z7d_A Ornithine aminotransfer 99.5 1.4E-13 4.9E-18 126.6 15.1 198 58-279 82-304 (433)
210 2pb2_A Acetylornithine/succiny 99.5 1.2E-13 4.1E-18 126.6 13.8 207 47-278 58-291 (420)
211 3gju_A Putative aminotransfera 99.5 4.7E-13 1.6E-17 124.1 16.6 207 58-278 68-312 (460)
212 3l44_A Glutamate-1-semialdehyd 99.5 7.2E-13 2.5E-17 121.7 16.6 202 47-278 56-291 (434)
213 3n5m_A Adenosylmethionine-8-am 99.5 2.2E-12 7.5E-17 119.2 19.8 203 58-278 66-306 (452)
214 4a6r_A Omega transaminase; tra 99.5 2.4E-13 8.1E-18 126.1 13.3 206 58-278 67-310 (459)
215 2epj_A Glutamate-1-semialdehyd 99.5 1.6E-12 5.6E-17 119.4 18.0 205 47-278 57-292 (434)
216 1zod_A DGD, 2,2-dialkylglycine 99.5 9.6E-13 3.3E-17 120.8 16.3 204 58-279 60-294 (433)
217 3fq8_A Glutamate-1-semialdehyd 99.5 1.3E-12 4.6E-17 119.6 17.2 206 47-279 53-289 (427)
218 2cy8_A D-phgat, D-phenylglycin 99.5 7.8E-13 2.7E-17 122.2 15.3 206 47-280 58-292 (453)
219 3tfu_A Adenosylmethionine-8-am 99.5 2.3E-13 8E-18 126.2 10.8 205 58-278 92-325 (457)
220 3i5t_A Aminotransferase; pyrid 99.5 3.7E-12 1.3E-16 118.7 18.9 205 58-279 71-314 (476)
221 3k28_A Glutamate-1-semialdehyd 99.4 2E-12 6.9E-17 118.6 16.5 203 47-278 54-289 (429)
222 4e77_A Glutamate-1-semialdehyd 99.4 2.8E-12 9.7E-17 117.6 17.3 206 47-279 54-290 (429)
223 3bwn_A AT1G70560, L-tryptophan 99.4 1.4E-13 4.8E-18 125.0 7.5 197 47-276 23-238 (391)
224 3dod_A Adenosylmethionine-8-am 99.4 2.4E-12 8.2E-17 118.9 15.8 204 58-279 61-303 (448)
225 2e7u_A Glutamate-1-semialdehyd 99.4 5E-12 1.7E-16 115.8 17.7 205 47-279 53-288 (424)
226 2cjg_A L-lysine-epsilon aminot 99.4 1.5E-12 5.1E-17 120.4 12.7 198 58-276 71-315 (449)
227 3hmu_A Aminotransferase, class 99.4 2.5E-12 8.5E-17 119.7 13.6 204 58-278 72-314 (472)
228 4ffc_A 4-aminobutyrate aminotr 99.4 3.4E-12 1.2E-16 118.1 12.9 205 58-278 81-315 (453)
229 2hox_A ALLIIN lyase 1; cystein 99.4 9.3E-14 3.2E-18 127.7 1.9 194 47-276 57-272 (427)
230 3oks_A 4-aminobutyrate transam 99.3 1.5E-11 5.3E-16 113.6 15.7 205 58-278 78-317 (451)
231 1ohv_A 4-aminobutyrate aminotr 99.1 3.1E-10 1.1E-14 105.5 12.6 202 58-274 80-342 (472)
232 2yky_A Beta-transaminase; tran 98.7 1.2E-11 4E-16 114.7 0.0 204 47-280 101-323 (465)
233 4ao9_A Beta-phenylalanine amin 98.9 9.2E-09 3.2E-13 94.8 13.0 193 58-280 104-310 (454)
234 4atq_A 4-aminobutyrate transam 98.5 1.2E-05 4E-10 74.2 18.7 207 58-278 81-316 (456)
235 4e3q_A Pyruvate transaminase; 97.6 0.0014 4.7E-08 60.6 14.9 204 58-277 84-326 (473)
236 4a0g_A Adenosylmethionine-8-am 97.6 0.00037 1.3E-08 68.8 11.7 92 185-279 577-687 (831)
237 2wqp_A Polysialic acid capsule 61.2 17 0.00057 31.8 6.3 92 180-274 156-257 (349)
238 1vli_A Spore coat polysacchari 60.9 37 0.0013 30.0 8.5 91 180-274 166-269 (385)
239 1zco_A 2-dehydro-3-deoxyphosph 59.5 22 0.00075 29.6 6.6 55 182-236 141-205 (262)
240 1vs1_A 3-deoxy-7-phosphoheptul 57.4 25 0.00084 29.6 6.5 58 179-236 152-220 (276)
241 3nvt_A 3-deoxy-D-arabino-heptu 52.8 22 0.00075 31.5 5.7 57 179-235 256-323 (385)
242 2ab1_A Hypothetical protein; H 52.6 36 0.0012 24.7 6.0 50 181-231 48-97 (122)
243 2yxb_A Coenzyme B12-dependent 52.4 20 0.00069 27.3 4.8 51 181-231 55-108 (161)
244 1vr6_A Phospho-2-dehydro-3-deo 51.0 24 0.00083 30.7 5.6 58 179-236 220-288 (350)
245 3v7e_A Ribosome-associated pro 50.3 18 0.0006 24.2 3.7 44 184-229 16-59 (82)
246 3ghf_A Septum site-determining 49.8 39 0.0013 24.4 5.8 46 182-227 25-78 (120)
247 4gqr_A Pancreatic alpha-amylas 48.5 10 0.00034 34.2 2.9 28 204-231 71-98 (496)
248 1y80_A Predicted cobalamin bin 48.2 35 0.0012 27.0 5.9 52 181-232 125-180 (210)
249 1xrs_B D-lysine 5,6-aminomutas 48.1 58 0.002 27.1 7.3 51 181-231 166-223 (262)
250 3bzy_B ESCU; auto cleavage pro 45.9 11 0.00038 25.4 2.1 20 212-231 29-48 (83)
251 3j21_Z 50S ribosomal protein L 45.5 37 0.0013 23.4 4.9 42 184-227 20-61 (99)
252 2lbw_A H/ACA ribonucleoprotein 44.0 57 0.002 23.4 5.9 52 184-236 25-77 (121)
253 3igs_A N-acetylmannosamine-6-p 43.8 71 0.0024 25.8 7.2 48 183-231 90-137 (232)
254 3q58_A N-acetylmannosamine-6-p 43.2 74 0.0025 25.6 7.2 48 183-231 90-137 (229)
255 1w41_A 50S ribosomal protein L 41.7 44 0.0015 23.1 4.8 50 184-235 21-72 (101)
256 4a18_G RPL30; ribosome, eukary 41.6 46 0.0016 23.2 4.9 43 184-228 27-69 (104)
257 4f6o_A Metacaspase-1; rossmann 40.8 34 0.0012 29.8 4.9 44 96-143 79-135 (350)
258 1lwj_A 4-alpha-glucanotransfer 40.5 16 0.00055 32.7 2.9 27 205-231 65-91 (441)
259 1g94_A Alpha-amylase; beta-alp 40.1 15 0.00052 33.0 2.7 28 204-231 59-86 (448)
260 3bh4_A Alpha-amylase; calcium, 39.9 17 0.00057 33.0 3.0 28 204-231 73-100 (483)
261 1ccw_A Protein (glutamate muta 39.5 27 0.00092 25.7 3.6 50 182-231 41-93 (137)
262 1wpc_A Glucan 1,4-alpha-maltoh 39.4 17 0.00059 32.9 3.0 27 205-231 78-104 (485)
263 1ud2_A Amylase, alpha-amylase; 39.3 17 0.00059 32.9 3.0 28 204-231 75-102 (480)
264 3qvo_A NMRA family protein; st 39.1 1.4E+02 0.0048 23.5 9.0 91 115-224 25-117 (236)
265 1ht6_A AMY1, alpha-amylase iso 39.1 18 0.0006 32.1 2.9 28 204-231 63-90 (405)
266 3t7y_A YOP proteins translocat 39.1 15 0.00052 25.6 2.0 20 212-231 44-63 (97)
267 4e84_A D-beta-D-heptose 7-phos 38.9 74 0.0025 27.3 6.9 37 195-231 186-222 (352)
268 3w01_A Heptaprenylglyceryl pho 38.8 51 0.0018 26.9 5.4 52 175-228 18-69 (235)
269 1hvx_A Alpha-amylase; hydrolas 38.8 18 0.00061 33.2 3.0 28 204-231 76-103 (515)
270 3kts_A Glycerol uptake operon 38.7 42 0.0014 26.5 4.7 42 183-228 18-59 (192)
271 1iv0_A Hypothetical protein; r 38.6 77 0.0026 21.8 5.7 52 180-231 36-94 (98)
272 2vt1_B Surface presentation of 38.3 17 0.00058 25.1 2.1 20 212-231 29-48 (93)
273 1n8f_A DAHP synthetase; (beta/ 37.6 33 0.0011 29.9 4.2 29 208-236 242-272 (350)
274 3c01_E Surface presentation of 37.5 17 0.00057 25.4 2.0 20 212-231 29-48 (98)
275 3cpq_A 50S ribosomal protein L 37.5 54 0.0018 23.1 4.8 42 184-227 26-67 (110)
276 1gcy_A Glucan 1,4-alpha-maltot 37.4 20 0.00069 33.0 3.1 28 204-231 87-114 (527)
277 4aie_A Glucan 1,6-alpha-glucos 37.3 19 0.00065 33.0 2.9 25 207-231 77-101 (549)
278 3u5e_c L32, RP73, YL38, 60S ri 37.2 67 0.0023 22.3 5.2 43 184-228 27-69 (105)
279 1mxg_A Alpha amylase; hyperthe 36.8 21 0.00073 31.9 3.1 28 204-231 81-108 (435)
280 2guy_A Alpha-amylase A; (beta- 36.6 20 0.00069 32.4 3.0 29 203-231 91-119 (478)
281 3on1_A BH2414 protein; structu 36.3 51 0.0017 22.7 4.5 43 184-228 23-65 (101)
282 3ff4_A Uncharacterized protein 35.4 58 0.002 23.4 4.8 37 185-227 73-109 (122)
283 3ezx_A MMCP 1, monomethylamine 35.2 45 0.0015 26.7 4.5 51 181-231 129-185 (215)
284 1wza_A Alpha-amylase A; hydrol 35.2 20 0.00068 32.6 2.7 28 204-231 76-103 (488)
285 2xzm_U Ribosomal protein L7AE 35.0 95 0.0033 22.5 5.9 52 184-236 29-81 (126)
286 3v7q_A Probable ribosomal prot 33.9 54 0.0018 22.7 4.2 43 184-228 24-66 (101)
287 2z1k_A (NEO)pullulanase; hydro 33.2 21 0.00073 32.2 2.5 26 206-231 93-118 (475)
288 2aaa_A Alpha-amylase; glycosid 32.9 23 0.00079 32.1 2.7 29 203-231 91-119 (484)
289 2dh2_A 4F2 cell-surface antige 32.3 24 0.00082 31.5 2.7 26 206-231 78-103 (424)
290 3i4k_A Muconate lactonizing en 32.3 1E+02 0.0035 26.9 6.8 50 181-230 254-303 (383)
291 2rdx_A Mandelate racemase/muco 31.8 77 0.0026 27.6 5.9 51 180-230 245-295 (379)
292 2d59_A Hypothetical protein PH 31.5 97 0.0033 22.7 5.6 42 184-231 91-132 (144)
293 1jae_A Alpha-amylase; glycosid 31.5 19 0.00066 32.6 1.9 26 206-231 71-96 (471)
294 3edf_A FSPCMD, cyclomaltodextr 31.4 27 0.00091 32.8 2.9 25 207-231 196-220 (601)
295 3sz8_A 2-dehydro-3-deoxyphosph 31.3 71 0.0024 26.9 5.2 53 182-234 145-206 (285)
296 1e2b_A Enzyme IIB-cellobiose; 31.2 26 0.00088 24.6 2.2 55 197-257 5-59 (106)
297 3dhu_A Alpha-amylase; structur 30.8 26 0.00089 31.4 2.7 25 207-231 81-105 (449)
298 2ale_A SNU13, NHP2/L7AE family 30.6 70 0.0024 23.5 4.6 51 184-235 37-88 (134)
299 1zja_A Trehalulose synthase; s 30.4 29 0.00098 32.2 2.9 25 207-231 77-101 (557)
300 3noy_A 4-hydroxy-3-methylbut-2 30.3 54 0.0018 28.6 4.3 51 180-231 91-141 (366)
301 1sjd_A N-acylamino acid racema 30.1 84 0.0029 27.1 5.8 49 181-229 242-290 (368)
302 2wc7_A Alpha amylase, catalyti 30.0 21 0.00073 32.4 2.0 26 206-231 99-124 (488)
303 3iz5_f 60S ribosomal protein L 29.6 73 0.0025 22.6 4.4 43 184-228 31-73 (112)
304 1cyg_A Cyclodextrin glucanotra 29.5 30 0.001 33.0 2.9 28 204-231 106-133 (680)
305 1qho_A Alpha-amylase; glycosid 29.4 30 0.001 33.1 2.9 28 204-231 102-129 (686)
306 1nu0_A Hypothetical protein YQ 29.2 1.4E+02 0.0048 21.9 6.1 55 179-233 37-99 (138)
307 2qkf_A 3-deoxy-D-manno-octulos 28.9 60 0.002 27.2 4.4 51 183-233 141-200 (280)
308 1d3c_A Cyclodextrin glycosyltr 28.8 31 0.0011 32.9 2.9 28 204-231 110-137 (686)
309 1m53_A Isomaltulose synthase; 28.7 28 0.00095 32.4 2.5 25 207-231 90-114 (570)
310 1kcz_A Beta-methylaspartase; b 28.6 1.3E+02 0.0045 26.5 6.9 57 171-229 302-358 (413)
311 3vzx_A Heptaprenylglyceryl pho 28.3 57 0.002 26.5 4.0 53 175-229 13-65 (228)
312 3b1s_B Flagellar biosynthetic 34.4 12 0.00042 25.5 0.0 20 212-231 29-48 (87)
313 1r0m_A N-acylamino acid racema 28.3 95 0.0032 26.9 5.9 48 181-228 248-295 (375)
314 1uok_A Oligo-1,6-glucosidase; 28.2 29 0.00098 32.2 2.5 25 207-231 76-100 (558)
315 1o60_A 2-dehydro-3-deoxyphosph 28.1 60 0.0021 27.4 4.3 51 183-233 144-203 (292)
316 3bmv_A Cyclomaltodextrin gluca 28.1 32 0.0011 32.8 2.9 28 204-231 111-138 (683)
317 3bc9_A AMYB, alpha amylase, ca 28.1 32 0.0011 32.3 2.8 25 207-231 206-230 (599)
318 3aj7_A Oligo-1,6-glucosidase; 27.8 34 0.0011 32.0 2.9 25 207-231 85-109 (589)
319 1j0h_A Neopullulanase; beta-al 27.8 34 0.0011 32.0 2.9 24 208-231 221-244 (588)
320 2fym_A Enolase; RNA degradosom 27.7 1.2E+02 0.004 27.1 6.4 50 180-229 319-368 (431)
321 1ua7_A Alpha-amylase; beta-alp 27.7 25 0.00086 31.2 2.0 28 204-231 69-96 (422)
322 3q45_A Mandelate racemase/muco 27.6 99 0.0034 26.8 5.8 50 181-230 244-293 (368)
323 1xbi_A 50S ribosomal protein L 27.5 86 0.003 22.4 4.5 51 184-235 34-85 (120)
324 4aef_A Neopullulanase (alpha-a 27.5 30 0.001 32.7 2.5 49 183-231 237-307 (645)
325 2xw6_A MGS, methylglyoxal synt 27.5 84 0.0029 23.1 4.5 46 186-231 65-113 (134)
326 2ze0_A Alpha-glucosidase; TIM 27.4 30 0.001 32.0 2.5 25 207-231 76-100 (555)
327 3qtp_A Enolase 1; glycolysis, 27.2 96 0.0033 27.9 5.6 46 183-228 333-378 (441)
328 1vmd_A MGS, methylglyoxal synt 26.9 1.3E+02 0.0045 23.3 5.7 47 186-232 89-138 (178)
329 1rlg_A 50S ribosomal protein L 26.8 1.1E+02 0.0037 21.7 5.0 51 184-235 32-83 (119)
330 2ovl_A Putative racemase; stru 26.8 73 0.0025 27.6 4.8 50 181-230 251-300 (371)
331 1tvm_A PTS system, galactitol- 26.5 1.1E+02 0.0037 21.5 4.9 56 196-257 22-78 (113)
332 2zic_A Dextran glucosidase; TI 26.4 30 0.001 31.9 2.3 24 208-231 77-100 (543)
333 1wzl_A Alpha-amylase II; pullu 26.2 35 0.0012 31.9 2.7 24 208-231 218-241 (585)
334 2jli_A YSCU, YOP proteins tran 26.2 33 0.0011 25.0 2.0 20 212-231 73-92 (123)
335 2csu_A 457AA long hypothetical 26.0 92 0.0032 28.0 5.4 52 184-238 78-134 (457)
336 3l21_A DHDPS, dihydrodipicolin 25.9 1.7E+02 0.0057 24.7 6.8 56 174-230 26-91 (304)
337 1kko_A 3-methylaspartate ammon 25.9 1.2E+02 0.004 26.8 6.1 51 180-230 309-359 (413)
338 1y81_A Conserved hypothetical 25.2 1.1E+02 0.0038 22.3 4.9 44 187-238 86-129 (138)
339 2ps2_A Putative mandelate race 25.1 70 0.0024 27.7 4.4 50 181-230 248-297 (371)
340 1chr_A Chloromuconate cycloiso 25.1 1.3E+02 0.0044 26.0 6.1 50 181-230 248-297 (370)
341 2duw_A Putative COA-binding pr 25.1 1.1E+02 0.0037 22.5 4.9 47 184-238 84-130 (145)
342 3cpr_A Dihydrodipicolinate syn 25.0 1.9E+02 0.0064 24.3 7.0 57 174-231 27-93 (304)
343 3bzs_A ESCU; auto cleavage pro 25.0 35 0.0012 25.4 2.0 20 212-231 83-102 (137)
344 4aee_A Alpha amylase, catalyti 25.0 35 0.0012 32.6 2.5 49 183-231 263-333 (696)
345 2aif_A Ribosomal protein L7A; 24.7 93 0.0032 22.8 4.3 43 184-227 46-88 (135)
346 1b93_A Protein (methylglyoxal 24.6 1.1E+02 0.0037 23.1 4.7 47 186-232 73-122 (152)
347 1g5a_A Amylosucrase; glycosylt 24.5 42 0.0014 31.7 2.9 25 207-231 160-184 (628)
348 3e48_A Putative nucleoside-dip 24.4 2.5E+02 0.0087 22.5 7.7 40 183-224 55-98 (289)
349 2ioj_A Hypothetical protein AF 24.4 75 0.0026 23.1 3.8 39 185-228 64-103 (139)
350 2oz8_A MLL7089 protein; struct 24.4 1E+02 0.0036 26.9 5.4 43 183-229 254-296 (389)
351 3pzt_A Endoglucanase; alpha/be 24.3 47 0.0016 28.3 3.0 51 181-231 68-126 (327)
352 1oi7_A Succinyl-COA synthetase 24.2 1.1E+02 0.0039 25.5 5.4 51 184-238 78-128 (288)
353 1wuf_A Hypothetical protein LI 24.2 1.4E+02 0.0047 26.1 6.1 49 181-229 261-309 (393)
354 4had_A Probable oxidoreductase 24.2 83 0.0028 26.7 4.6 48 183-232 99-146 (350)
355 2fc3_A 50S ribosomal protein L 24.1 1.1E+02 0.0037 22.0 4.5 51 184-235 33-84 (124)
356 1ea9_C Cyclomaltodextrinase; h 23.9 38 0.0013 31.6 2.5 49 183-231 170-240 (583)
357 3o85_A Ribosomal protein L7AE; 23.7 1.1E+02 0.0037 22.0 4.5 50 184-235 36-87 (122)
358 3mio_A DHBP synthase, 3,4-dihy 23.7 1.7E+02 0.0057 23.3 5.9 34 195-228 158-194 (206)
359 3czg_A Sucrose hydrolase; (alp 23.6 39 0.0013 32.0 2.5 24 208-231 154-177 (644)
360 3nbm_A PTS system, lactose-spe 23.6 45 0.0015 23.5 2.3 57 195-257 6-62 (108)
361 2jlj_A YSCU, YOP proteins tran 23.6 38 0.0013 25.4 2.0 20 212-231 82-101 (144)
362 2abq_A Fructose 1-phosphate ki 23.5 1.8E+02 0.0061 24.0 6.5 51 181-231 107-163 (306)
363 2qdd_A Mandelate racemase/muco 23.2 83 0.0028 27.3 4.5 50 181-230 246-295 (378)
364 1iuk_A Hypothetical protein TT 23.1 88 0.003 22.9 4.0 39 187-231 87-125 (140)
365 2wkj_A N-acetylneuraminate lya 23.1 2.5E+02 0.0086 23.5 7.4 56 174-230 22-87 (303)
366 2i2x_B MTAC, methyltransferase 23.1 1E+02 0.0035 25.2 4.8 50 182-231 161-212 (258)
367 2yv1_A Succinyl-COA ligase [AD 22.9 1E+02 0.0034 25.9 4.8 52 183-238 83-134 (294)
368 1vq8_F 50S ribosomal protein L 22.8 1.1E+02 0.0039 21.7 4.5 51 184-235 34-85 (120)
369 1w6t_A Enolase; bacterial infe 22.8 95 0.0033 27.8 4.9 49 181-229 332-380 (444)
370 1g57_A DHBP synthase, 3,4-dihy 22.7 1.8E+02 0.0061 23.3 5.9 34 195-228 167-201 (217)
371 2yv2_A Succinyl-COA synthetase 22.7 1E+02 0.0035 25.9 4.8 52 183-238 84-135 (297)
372 3hp4_A GDSL-esterase; psychrot 22.7 1.1E+02 0.0039 22.6 4.8 47 183-230 91-143 (185)
373 2pgw_A Muconate cycloisomerase 22.6 70 0.0024 27.9 3.9 50 181-230 250-299 (384)
374 3fs2_A 2-dehydro-3-deoxyphosph 22.5 73 0.0025 27.0 3.8 51 182-233 166-224 (298)
375 3i6i_A Putative leucoanthocyan 22.5 3.3E+02 0.011 22.6 8.2 102 115-227 12-115 (346)
376 3mwd_B ATP-citrate synthase; A 22.5 93 0.0032 26.8 4.5 52 184-238 93-144 (334)
377 3o63_A Probable thiamine-phosp 22.4 1.4E+02 0.0047 24.3 5.4 46 184-230 46-103 (243)
378 7a3h_A Endoglucanase; hydrolas 22.4 55 0.0019 27.4 3.0 24 210-233 80-103 (303)
379 2okt_A OSB synthetase, O-succi 22.3 1.3E+02 0.0044 25.7 5.5 51 181-231 223-273 (342)
380 3jva_A Dipeptide epimerase; en 22.3 92 0.0031 26.8 4.5 52 180-231 242-293 (354)
381 3vup_A Beta-1,4-mannanase; TIM 22.3 57 0.0019 26.9 3.1 20 211-230 91-110 (351)
382 2p8b_A Mandelate racemase/muco 22.2 92 0.0031 26.9 4.5 50 181-230 246-295 (369)
383 2l2q_A PTS system, cellobiose- 22.0 1E+02 0.0035 21.4 4.0 56 196-257 5-60 (109)
384 1rvk_A Isomerase/lactonizing e 21.8 76 0.0026 27.6 3.9 50 180-229 259-309 (382)
385 3flu_A DHDPS, dihydrodipicolin 21.7 1.8E+02 0.0062 24.3 6.2 54 174-228 18-81 (297)
386 1nu5_A Chloromuconate cycloiso 21.7 89 0.0031 27.0 4.4 50 181-230 248-297 (370)
387 2gm2_A Conserved hypothetical 21.7 96 0.0033 22.7 3.8 49 181-231 51-99 (132)
388 3zss_A Putative glucanohydrola 21.5 54 0.0018 31.4 3.1 24 208-231 319-342 (695)
389 3e2i_A Thymidine kinase; Zn-bi 21.4 1.3E+02 0.0043 24.2 4.8 35 195-230 101-135 (219)
390 3dip_A Enolase; structural gen 21.4 1.5E+02 0.0053 26.0 5.9 50 181-230 274-323 (410)
391 4fb5_A Probable oxidoreductase 21.4 78 0.0027 27.2 3.9 24 208-231 130-153 (393)
392 1f6k_A N-acetylneuraminate lya 21.2 2.1E+02 0.0071 23.8 6.5 56 174-230 14-80 (293)
393 2pa6_A Enolase; glycolysis, ly 21.1 1E+02 0.0034 27.4 4.6 46 183-228 320-365 (427)
394 3b0z_B Flagellar biosynthetic 26.5 20 0.0007 25.7 0.0 20 212-231 29-48 (114)
395 2whl_A Beta-mannanase, baman5; 20.8 60 0.002 26.9 2.9 26 208-233 62-87 (294)
396 3ie7_A LIN2199 protein; phosph 20.7 1.3E+02 0.0043 25.1 5.1 51 181-231 114-171 (320)
397 1tvn_A Cellulase, endoglucanas 20.6 66 0.0023 26.6 3.1 22 211-232 80-101 (293)
398 2f02_A Tagatose-6-phosphate ki 20.5 2.1E+02 0.0074 23.7 6.5 51 181-231 110-167 (323)
399 1tks_A 3,4-dihydroxy-2-butanon 20.5 1.6E+02 0.0054 23.4 5.1 34 195-228 159-194 (204)
400 1xky_A Dihydrodipicolinate syn 20.5 2E+02 0.0068 24.1 6.2 56 174-230 23-88 (301)
401 2hzg_A Mandelate racemase/muco 20.4 1E+02 0.0035 27.0 4.5 50 180-229 255-304 (401)
402 2al1_A Enolase 1, 2-phospho-D- 20.4 1.1E+02 0.0039 27.3 4.8 46 183-228 326-371 (436)
403 3tml_A 2-dehydro-3-deoxyphosph 20.2 74 0.0025 26.8 3.3 38 196-234 166-207 (288)
404 1bqc_A Protein (beta-mannanase 20.2 68 0.0023 26.7 3.1 22 210-231 65-86 (302)
405 3tsm_A IGPS, indole-3-glycerol 20.1 1.9E+02 0.0064 24.0 5.8 52 178-231 126-177 (272)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=338.60 Aligned_cols=263 Identities=65% Similarity=1.090 Sum_probs=211.6
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
+..|+..+|+++..+.+|..+|+..|+|+++||++|+.|++++...+.+.|.+|||+.+||++++.++++|..++++.++
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCC
Q 022564 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (295)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id 183 (295)
+||+++.+|+|+|.+.||+.||++++.++++|||+|+..+..|++|++..+......+.+.|..++.++++++++++.||
T Consensus 112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID 191 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999988654333556778888889999998899999
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCC
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp 263 (295)
+|++++...+.+||+|+++.|.++...|.+++.+||++.|+++++|.||.+|.+..++.++|+.++|++++++||+|.||
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP 271 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEeCCchhhhc-cCCeeEE
Q 022564 264 RGAMIFFRKGVKEINK-QGKEFTC 286 (295)
Q Consensus 264 ~gG~l~~~~~~~~~~~-~~~~~~~ 286 (295)
+||+|+++++...+.. .++.+.|
T Consensus 272 rGG~Il~~~~~~~~~~k~~~~~~~ 295 (490)
T 3ou5_A 272 RSGLIFYRKGVKAVDPKTGREIPY 295 (490)
T ss_dssp SCEEEEEECSEEEECC--CCEEEC
T ss_pred CceEEEeccccccccccccchhHH
Confidence 9999999998654332 2444443
No 2
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=1.7e-39 Score=304.47 Aligned_cols=258 Identities=63% Similarity=1.054 Sum_probs=229.9
Q ss_pred CcchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 18 TWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
+...+++.+++.++++++..+.++..++.+.|+|+++++++|+.|++++.+.+.+.|.+|||+.++|++....+++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 95 (483)
T 1rv3_A 16 SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLC 95 (483)
T ss_dssp THHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHH
T ss_pred hHHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHH
Confidence 34666778899999999999999988888999999999999999999999999888888999988999988999999999
Q ss_pred HHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 98 QKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
++++++++|+++++|.++|++++|+.++.+++.++++|||+|++++++|++++.+++..+..++.+.|..++.+++++++
T Consensus 96 ~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~ 175 (483)
T 1rv3_A 96 QKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP 175 (483)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT
T ss_pred HHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc
Confidence 99999999998765556799999998888779999999999999999999999988877766777888777778877776
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 178 STGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 178 ~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
+++.+|+++|++++++.+||+|+++.+|++...|+++|.++|+++|+++++|++|+.|.+..+..+.++.++|++++|+|
T Consensus 176 ~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~ 255 (483)
T 1rv3_A 176 DTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255 (483)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESS
T ss_pred CCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCc
Confidence 67899999999999844999999977777788899999999999999999999999999888877776557999999999
Q ss_pred CCCCCCceEEEEEeCCch
Q 022564 258 KSLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 258 K~l~gp~gG~l~~~~~~~ 275 (295)
|+|+||+||++++++++.
T Consensus 256 K~l~GprgG~i~~~~~~~ 273 (483)
T 1rv3_A 256 KTLRGCRAGMIFYRRGVR 273 (483)
T ss_dssp GGGCCCSCEEEEEECSBC
T ss_pred ccCCCCCceEEEEcchhh
Confidence 999999999999998743
No 3
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=3.2e-39 Score=301.40 Aligned_cols=252 Identities=67% Similarity=1.113 Sum_probs=188.9
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
+..++.++|+++..+.+|..++++.|+|+++++++++.|+++|.+.+.+.|.+|||++++|++....+++++.+++++++
T Consensus 32 ~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred cchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999988999999999999998888999999999999
Q ss_pred HcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCC
Q 022564 104 AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYID 183 (295)
Q Consensus 104 ~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id 183 (295)
++|+++++|+++|+++||+.++.+++.++++|||+|++.+++|++|+..........+.+.|..+..++++++++++.+|
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD 191 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBC
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcC
Confidence 99999876655666778877999899999999999999999999987654422222334566656667777776678999
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCC
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 263 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp 263 (295)
++++++++++.++|+|+++.+++|...|+++|.++|++||+++++|++|++|.+..+..+.++.++|++++|+||+|+||
T Consensus 192 ~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp 271 (490)
T 2a7v_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSC
T ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccc
Confidence 99999999765899999888888988899999999999999999999999998877776666667999999999999999
Q ss_pred ceEEEEEeCCch
Q 022564 264 RGAMIFFRKGVK 275 (295)
Q Consensus 264 ~gG~l~~~~~~~ 275 (295)
+||++++++++.
T Consensus 272 ~GG~i~~~~~~~ 283 (490)
T 2a7v_A 272 RSGLIFYRKGVK 283 (490)
T ss_dssp SCEEEEEECSEE
T ss_pred cchheeeccchh
Confidence 999999998753
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-32 Score=252.94 Aligned_cols=248 Identities=45% Similarity=0.726 Sum_probs=205.0
Q ss_pred hhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 21 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
..+...+..++++++..+.++..++.+.|+|.+++++++|.|++++.+.+.+.|..++++.++|.+....+.+++.++++
T Consensus 20 ~~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~ 99 (447)
T 3h7f_A 20 GSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDR 99 (447)
T ss_dssp CGGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHH
Confidence 56678889999999999998888888999999999999999999999998777877888888888888887777777799
Q ss_pred HHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC
Q 022564 101 ALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (295)
Q Consensus 101 la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (295)
+++++|++.. .+++++|+.++.+++.+++++||+|+++++.|++++..... +...|..+..++++++++++
T Consensus 100 la~~~g~~~~----~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~ 170 (447)
T 3h7f_A 100 AKALFGAEFA----NVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMR-----LNFSGKLYENGFYGVDPATH 170 (447)
T ss_dssp HHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCT-----TSHHHHSSEEEEECCCTTTC
T ss_pred HHHHcCCCce----EEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhh-----hhhcCCeeEEEEcCcCcccC
Confidence 9999999862 55577777788889999999999999999988886443321 12334445556666665678
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCC
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l 260 (295)
.+|++++++++++.++++|+++.++++...++++|.++|++||+++|+|++|+.|....+....++.++|++++|+||+|
T Consensus 171 ~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l 250 (447)
T 3h7f_A 171 LIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTL 250 (447)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGG
T ss_pred CcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCC
Confidence 89999999999755899999987777766799999999999999999999999887766555545556899999999999
Q ss_pred CCCceEEEEEeCCchhh
Q 022564 261 RGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 261 ~gp~gG~l~~~~~~~~~ 277 (295)
+||+||++++++++.+.
T Consensus 251 ~G~~gG~i~~~~~~~~~ 267 (447)
T 3h7f_A 251 GGGRSGLIVGKQQYAKA 267 (447)
T ss_dssp CCCSCEEEEECGGGHHH
T ss_pred CCCCeEEEEECHHHHHH
Confidence 99999999999876543
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=7.2e-32 Score=247.04 Aligned_cols=241 Identities=49% Similarity=0.822 Sum_probs=194.1
Q ss_pred cccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc
Q 022564 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (295)
.++.++++++..+.++..++.+.++|.++++++++.+++++.+.+.+.+..++++..+|.+....+++++.+++++++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 46778999999998888888889999999999999999999999877677778887888888888899988999999999
Q ss_pred CCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHH
Q 022564 106 RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (295)
Q Consensus 106 g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e 185 (295)
|++++ +|++++|+.++..++.+++++||+|+++.+.|+++....... ...|..+..++++++ +++.+|++
T Consensus 85 g~~~~----~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~-~~~~~d~~ 154 (417)
T 3n0l_A 85 NCKFA----NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKV-----SSSGKMYESCFYGVE-LDGRIDYE 154 (417)
T ss_dssp TCSEE----ECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCHH
T ss_pred CCCCc----ceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhh-----hhhcceeeeEeccCC-CCCCcCHH
Confidence 99874 699999966888888999999999999999998775543322 233444555666666 67889999
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce
Q 022564 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (295)
Q Consensus 186 ~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g 265 (295)
++++++++.++++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+..+..+.++|++++|+||+|+||+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~ 234 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC
T ss_pred HHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe
Confidence 99999984489999988778899999999999999999999999999988876665555545689999999999999999
Q ss_pred EEEEEeC-Cchh
Q 022564 266 AMIFFRK-GVKE 276 (295)
Q Consensus 266 G~l~~~~-~~~~ 276 (295)
|++++++ ++.+
T Consensus 235 G~~~~~~~~~~~ 246 (417)
T 3n0l_A 235 GIIMTNDEELAK 246 (417)
T ss_dssp EEEEESCHHHHH
T ss_pred eEEEECCHHHHH
Confidence 9999984 5543
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1e-30 Score=239.45 Aligned_cols=242 Identities=48% Similarity=0.800 Sum_probs=183.5
Q ss_pred hhccCc--ccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 21 KQLNAP--LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 21 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+++++. ++.++++++..+.++..+..+.+.+.+++++++|.+++++.+.+.+.+..++++..++.+....+.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (420)
T 3gbx_A 3 AMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAI 82 (420)
T ss_dssp CBCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHH
T ss_pred hHHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHH
Confidence 456666 788999999999998777778899999999999999999999986666667887777777777777888888
Q ss_pred HHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 99 KRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 99 ~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
+++++++|++++ .|++++|+.++..++.+++++||+|++..+.|+++....... ...|..+..++++.+ +
T Consensus 83 ~~la~~~~~~~~----~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~-~ 152 (420)
T 3gbx_A 83 DRAKELFGADYA----NVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPV-----NFSGKLYNIVPYGID-E 152 (420)
T ss_dssp HHHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-T
T ss_pred HHHHHHhCCCCc----eeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhh-----hhcccceeEEeccCC-c
Confidence 999999999774 677888866888788999999999999999998865433321 233444555666666 6
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCC
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHK 258 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K 258 (295)
++.+|++++++++++.++++|+++.+|+|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||
T Consensus 153 ~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK 232 (420)
T 3gbx_A 153 SGKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHK 232 (420)
T ss_dssp TCSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSG
T ss_pred cCCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeeccc
Confidence 67899999999998757999999888888889999999999999999999999988877655444444468999999999
Q ss_pred CCCCCceEEEEEeC
Q 022564 259 SLRGPRGAMIFFRK 272 (295)
Q Consensus 259 ~l~gp~gG~l~~~~ 272 (295)
+|+||+||++++++
T Consensus 233 ~~~g~~gg~~~~~~ 246 (420)
T 3gbx_A 233 TLAGPRGGLILAKG 246 (420)
T ss_dssp GGCSCSCEEEEESS
T ss_pred CCCCCCceEEEEcC
Confidence 99999999999998
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=3.2e-30 Score=236.48 Aligned_cols=245 Identities=43% Similarity=0.678 Sum_probs=180.2
Q ss_pred chhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 20 PKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
+.++++.+..++++++..+.++..++.+.++|.+++++.+|.+++++.+.+.+.|..++++.++|.+....+.+++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (425)
T 3ecd_A 6 NPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIE 85 (425)
T ss_dssp SHHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHH
T ss_pred chHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHH
Confidence 35678889999999999998887777789999999999999999999999876676677777777766655566766778
Q ss_pred HHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCC
Q 022564 100 RALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (295)
Q Consensus 100 ~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (295)
.+++++|++.. .|++++|+.++..++.+++++||+|+++.+.|+++..... .....|..+..++++.++++
T Consensus 86 ~~~~~~~~~~~----~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~ 156 (425)
T 3ecd_A 86 RVKRLFNAGHA----NVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDT 156 (425)
T ss_dssp HHHHHHTCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTT
T ss_pred HHHHHhCCCCc----eeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCccc
Confidence 89999998762 4546666658887888899999999999998877432222 11134444555666666566
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCC
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~ 259 (295)
+.+|++++++++++.++++|+++++++|...++++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+
T Consensus 157 ~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~ 236 (425)
T 3ecd_A 157 MLIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKT 236 (425)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGG
T ss_pred CccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcc
Confidence 89999999999975589999998788898999999999999999999999999988776554433333579999999999
Q ss_pred CCCCceEEEEEeCC
Q 022564 260 LRGPRGAMIFFRKG 273 (295)
Q Consensus 260 l~gp~gG~l~~~~~ 273 (295)
|+||+||+++++++
T Consensus 237 l~g~~~g~~~~~~~ 250 (425)
T 3ecd_A 237 LRGPRGGFVLTNDE 250 (425)
T ss_dssp GCCCSCEEEEESCH
T ss_pred cCCCCcEEEEeCCH
Confidence 99999999999853
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=7.6e-29 Score=226.10 Aligned_cols=242 Identities=47% Similarity=0.814 Sum_probs=187.9
Q ss_pred cccccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc
Q 022564 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (295)
.++++++.++..+.++...+.+.+.+.+++++.++.+++++.+.+.+.+..++++..++.+.....++++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~ 82 (405)
T 2vi8_A 3 YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF 82 (405)
T ss_dssp SHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 45678899999998887776677777788888899999999998865454556666556665667788888899999999
Q ss_pred CCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHH
Q 022564 106 RLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYD 185 (295)
Q Consensus 106 g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e 185 (295)
|++++ .+++++|+.++..++.+++++||+|+++.+.|+++...... +...|..+..++++++++++.+|++
T Consensus 83 g~~~~----~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~d~~ 153 (405)
T 2vi8_A 83 GAEHA----NVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSP-----VNFSGVQYNFVAYGVDPETHVIDYD 153 (405)
T ss_dssp TCSEE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCT-----TSHHHHHSEEEEECBCTTTCSBCHH
T ss_pred CCCce----EEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccch-----hhhccceeEEEecccccccCCcCHH
Confidence 99863 56678885588888899999999999999888777542211 1133332344555555456789999
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce
Q 022564 186 QLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 265 (295)
Q Consensus 186 ~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g 265 (295)
++++++++.++++|+++++++|...++++|.++|++||+++|+|++|+.|....+....++..+|++++|+||+|+||.|
T Consensus 154 ~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g 233 (405)
T 2vi8_A 154 DVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG 233 (405)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC
T ss_pred HHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC
Confidence 99999975478999887777787778999999999999999999999987665554443333589999999999988889
Q ss_pred EEEEEeCCchh
Q 022564 266 AMIFFRKGVKE 276 (295)
Q Consensus 266 G~l~~~~~~~~ 276 (295)
|++++++++.+
T Consensus 234 G~~~~~~~~~~ 244 (405)
T 2vi8_A 234 GMILCQEQFAK 244 (405)
T ss_dssp EEEEECHHHHH
T ss_pred eEEEEcHHHHH
Confidence 99999877644
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.96 E-value=1e-28 Score=225.41 Aligned_cols=239 Identities=48% Similarity=0.791 Sum_probs=187.1
Q ss_pred ccCHHHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC
Q 022564 29 VVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD 108 (295)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~ 108 (295)
+.++.++..+.++.....+.++|..++++.++.+.+++.+.+.+.+..+|++..++.+......+++.+++++++++|++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~ 85 (407)
T 2dkj_A 6 KRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAA 85 (407)
T ss_dssp CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 45688999999988777889999999998899999999998865343456655444444444456666778999999998
Q ss_pred CCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHH
Q 022564 109 PEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 109 ~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ +|++++|+.++..++.+++++||+|+++.+.|+++..+.. .+...|..+..++++++++++.+|+++++
T Consensus 86 ~~----~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 156 (407)
T 2dkj_A 86 WA----NVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEVR 156 (407)
T ss_dssp EE----ECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHHH
T ss_pred cc----eEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHHH
Confidence 63 6778888888887888889999999999988877743222 22344544455665555446789999999
Q ss_pred HHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEE
Q 022564 189 KSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 268 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l 268 (295)
+++++.++++|+++.+++|...|+++|.++|++||+++|+|++|+.|....+.....+..+|++++|+||+++||+||++
T Consensus 157 ~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~ 236 (407)
T 2dkj_A 157 RLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLI 236 (407)
T ss_dssp HHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEE
T ss_pred HHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEE
Confidence 99975489999998777788889999999999999999999999987776554333333489999999999999999999
Q ss_pred EEe-CCchh
Q 022564 269 FFR-KGVKE 276 (295)
Q Consensus 269 ~~~-~~~~~ 276 (295)
+++ +++.+
T Consensus 237 ~~~~~~~~~ 245 (407)
T 2dkj_A 237 LSNDPELGK 245 (407)
T ss_dssp EESCHHHHH
T ss_pred EECCHHHHH
Confidence 999 56543
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.91 E-value=1.4e-23 Score=189.56 Aligned_cols=199 Identities=14% Similarity=0.078 Sum_probs=153.1
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC--CCcceeEEeCCChH-HH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~--~~~~~~v~~~sG~~-a~ 125 (295)
+.+.++..++++++++++.+.+...+ ......+.+.+++++++++|+++ + +|++++|++ ++
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~~----~v~~~~g~t~al 67 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT------------SKEFVEALAYSLKGLRYVMGASKNYQ----PLIIPGGGTSAM 67 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT------------SHHHHHHHHHHHHHHHHHHTCCTTSE----EEEEESCHHHHH
T ss_pred eeccCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCCc----EEEEcCCcHHHH
Confidence 46677888889999999987654311 12335666678899999999976 4 799999999 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
. ++.+++++||+|+++++.|.+. +. ...+...|.++..++ .+ .++.+|++++++++++.++++|+++.++
T Consensus 68 ~-~~~~~~~~gd~vi~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 137 (384)
T 3zrp_A 68 E-SVTSLLKPNDKILVVSNGVFGD--RW----EQIFKRYPVNVKVLR--PS-PGDYVKPGEVEEEVRKSEYKLVALTHVE 137 (384)
T ss_dssp H-HGGGGCCTTCEEEEECSSHHHH--HH----HHHHTTSSCEEEEEC--CS-TTCCCCHHHHHHHHHHSCEEEEEEESEE
T ss_pred H-HHHhhcCCCCEEEEecCCcchH--HH----HHHHHHcCCcEEEec--CC-CCCCCCHHHHHHHHHhCCCcEEEEeCCC
Confidence 8 8889999999999999766542 11 112234565554444 55 4578999999999987578999997544
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
| |...|+++|.++|++||+++|+|++|+.+....+....+ +|++++|+||+|+||.| |++++++++.+
T Consensus 138 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~~~~~~g~g~~~~~~~~~~ 208 (384)
T 3zrp_A 138 TSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWN---VDVYLTASQKALGSAAGLGLLLLSPKALS 208 (384)
T ss_dssp TTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTT---CSEEEEETTSTTCCCSSEEEEEECHHHHH
T ss_pred CCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccC---CCEEEecCcccccCCCceEEEEECHHHHH
Confidence 4 478899999999999999999999999887765554444 89999999999988888 99999988644
No 11
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.90 E-value=8.9e-23 Score=184.43 Aligned_cols=198 Identities=12% Similarity=0.045 Sum_probs=150.9
Q ss_pred cCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHH
Q 022564 52 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVY 129 (295)
Q Consensus 52 ~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~ 129 (295)
.++...+++.+.+++.+.+.+.| + ....++++++++++++++|++ ++ ++++++|++ ++..++
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~~~~----~v~~~~g~t~a~~~~~ 88 (386)
T 2dr1_A 25 TAGPVACFPEVLEIMKVQMFSHR----------S--KEYRKVHMDTVERLREFLEVEKGE----VLLVPSSGTGIMEASI 88 (386)
T ss_dssp CSSSCCCCHHHHHHTTSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCSSSE----EEEESSCHHHHHHHHH
T ss_pred cCCCcCCcHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCCCCc----EEEEeCChHHHHHHHH
Confidence 45555678999999887654322 1 123677788889999999997 43 699999999 888888
Q ss_pred HhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEcCCCC--
Q 022564 130 TALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAGASAY-- 206 (295)
Q Consensus 130 ~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~~~n~-- 206 (295)
.+++++||+|+++.+.|.+.. +...+...|.++..++ .+ .++.+|++++++++++ .++++|+++.+++
T Consensus 89 ~~l~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~npt 159 (386)
T 2dr1_A 89 RNGVSKGGKVLVTIIGAFGKR------YKEVVESNGRKAVVLE--YE-PGKAVKPEDLDDALRKNPDVEAVTITYNETST 159 (386)
T ss_dssp HHHSCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHCTTCCEEEEESEETTT
T ss_pred HHhhcCCCeEEEEcCCchhHH------HHHHHHHhCCceEEEe--cC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecCCc
Confidence 889999999999997776631 1112334565554444 55 4578999999999953 3799999975444
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
|...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||+|++|.| |++++++++.+.
T Consensus 160 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~ 228 (386)
T 2dr1_A 160 GVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW---GLDVVFSSSQKAFGVPPGLAIGAFSERFLEI 228 (386)
T ss_dssp TEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEEEETTSTTCCCSSCEEEEECHHHHHH
T ss_pred chhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc---CCcEEEEeccccccCCCceEEEEECHHHHHH
Confidence 47889999999999999999999999988765444333 389999999999998877 999999886543
No 12
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=8.8e-24 Score=190.33 Aligned_cols=199 Identities=16% Similarity=0.188 Sum_probs=152.2
Q ss_pred CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc
Q 022564 55 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL 133 (295)
Q Consensus 55 ~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~ 133 (295)
..++++.+.+++.+.+.+.+ +++... +.......++.+++++++++++|++++ +|++++|++ ++..++.+++
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 9 AKPVDERILEAMLPYMTESF--GNPSSV-HSYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSC--CCTTCS-SHHHHHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhc--CCCccc-chHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHhh
Confidence 34678999999999887644 444331 222234456777788999999999875 799999999 8887888887
Q ss_pred ----CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--C
Q 022564 134 ----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--A 207 (295)
Q Consensus 134 ----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~ 207 (295)
++||+|+++.++|+++....... ...|.++..++ .+ +++.+|++++++++++ ++++|+++.+++ |
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 152 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPAKFL-----QKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIG 152 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHHHHH-----HHTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTC
T ss_pred hhhcCCCCEEEECCCCcHHHHHHHHHH-----HhcCCEEEEec--cC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCce
Confidence 99999999999888876543311 12354454444 55 5678999999999987 889998875554 4
Q ss_pred CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
...|+++|.++|++||+ +|+|++|+.|....+....+ +|++++|+||+ .||.| |+++++++.
T Consensus 153 ~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~-~g~~g~g~~~~~~~~ 215 (382)
T 4hvk_A 153 TIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIG---ADMLTISSNDI-YGPKGVGALWIRKEA 215 (382)
T ss_dssp BBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHT---CSEEEEESGGG-TSCTTCEEEEEETTC
T ss_pred eeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcC---CCEEEEeHHHh-cCCCceEEEEEcCcc
Confidence 78899999999999999 99999999877655433333 89999999996 46777 999998764
No 13
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.90 E-value=5e-23 Score=186.78 Aligned_cols=204 Identities=13% Similarity=0.113 Sum_probs=155.1
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
..++++++...+++.+++++.+.+...+ .........++++++++++|++++. +|++++|++ ++
T Consensus 19 ~~~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~---~i~~~~g~t~a~ 83 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNIA---TFCLSASGHGGM 83 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESSCHHHHH
T ss_pred CeEEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCCc---EEEEcCcHHHHH
Confidence 3567777777789999999987664321 1233456667889999999997642 699999988 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
..++.+++++||+|+++.+.|.++. .. ..+...|..+..++ .+ .++.+|++++++++++.++++|+++.++
T Consensus 84 ~~~~~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 154 (393)
T 2huf_A 84 EATLCNLLEDGDVILIGHTGHWGDR--SA----DMATRYGADVRVVK--SK-VGQSLSLDEIRDALLIHKPSVLFLTQGD 154 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHHhCCCCEEEEECCCcchHH--HH----HHHHHcCCeeEEEe--CC-CCCCCCHHHHHHHHhccCCcEEEEEccC
Confidence 8888888999999999998776641 11 01123454454454 44 4568999999999975479999998555
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
| |...|+++|.++|++||+++|+|++|+.|..+.++... ++|++++|+||+|+||.| |++++++++.+.
T Consensus 155 nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~ 226 (393)
T 2huf_A 155 SSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRW---EIDAMYTGSQKVLGAPPGITPVSFSHRAVER 226 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSSSTTCCCSSCEEEEECHHHHHH
T ss_pred CCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhc---CccEEEECCCcccccCCCeEEEEECHHHHHH
Confidence 4 47788999999999999999999999888765544333 389999999999999988 999999876554
No 14
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.90 E-value=6.2e-23 Score=187.15 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=155.0
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
.+.+.++...+++.+.+++.+.+...+ ......+.+.+++++++++|++.+. .+++++|++ ++.
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~sgt~al~ 78 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIGQY------------DPAMTHYMNEVMALYRGVFRTENRW---TMLVDGTSRAGIE 78 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSE---EEEEESCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCc---EEEECCCcHHHHH
Confidence 456677777789999999876542211 1223456667889999999997652 377777766 888
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
.++.+++++||+|+++.+.|.+.. +...+...|.++..++ .+ +++.+|++++++++++.++++|+++.++|
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 149 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHL------LCEIARRCRAEVHTIE--VP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDT 149 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCchHHH------HHHHHHHcCCeEEEEe--cC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCC
Confidence 788999999999999997665521 1112334565555554 44 56789999999999755899999985444
Q ss_pred --CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 207 --ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 207 --~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
|...|+++|.++|++||+++|+|++|+.+..+.+....+ +|++++|+||+|+||.| |++++++++.+..
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~ 221 (411)
T 3nnk_A 150 STTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWG---LDAVSAGMQKCLGGPSGTSPITLSARMEEAI 221 (411)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTT---CSEEECCSTTTTCCCSSEEEEEECHHHHHHH
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccC---CcEEEecCccccCCCCceEEEEECHHHHHHH
Confidence 478899999999999999999999999887766655444 99999999999888888 9999998876543
No 15
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=8.7e-23 Score=186.46 Aligned_cols=203 Identities=15% Similarity=0.155 Sum_probs=152.8
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEE-eCCChH-HH
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQ-SLSGSP-SN 125 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~-~~sG~~-a~ 125 (295)
.+.+.++...+++.+.+++.+.....+ .....++.+.+++++++++|++++ .++ +++|++ ++
T Consensus 12 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~----~~~~~~~s~t~al 75 (416)
T 3isl_A 12 RTIMTPGPVEVDPRVLRVMSTPVVGQF------------DPAFTGIMNETMEMLRELFQTKNR----WAYPIDGTSRAGI 75 (416)
T ss_dssp CEECSSSSCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHTTCCCS----EEEEEESCHHHHH
T ss_pred ceeecCCCcCcCHHHHHHhcccCCCCc------------cHHHHHHHHHHHHHHHHHhCCCCC----cEEEecCcHHHHH
Confidence 456667776788888888866321111 123356667788999999999875 444 666665 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
..++.+++++||+|+++++.|.+.. +...+...|.++..++ .+ .++.+|++++++++++.++++|+++.++
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~------~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 146 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYL------LTEIAERYGANVHMLE--CE-WGTVFDPEDIIREIKKVKPKIVAMVHGE 146 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHhcCCCCEEEEecCCcccHH------HHHHHHhcCCeeEEEe--cC-CCCCCCHHHHHHHHhhCCCcEEEEEccC
Confidence 8788899999999999997666521 1112334565555554 44 4578999999999984489999998544
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
| |...|+++|.++|++||+++|+|++|+.|..+.+....+ +|++++|+||+++||.| |++++++++.+..
T Consensus 147 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~ 219 (416)
T 3isl_A 147 TSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWK---IDAAIGGTQKCLSVPSGMAPITYNERVADVI 219 (416)
T ss_dssp TTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CSEEECCSSSTTCCCSSEEEEEECHHHHHHH
T ss_pred CCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcC---CCEEEecCccccCCCCCeEEEEECHHHHHHh
Confidence 4 478899999999999999999999999887766655444 99999999999989988 9999998875543
No 16
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.90 E-value=2.6e-23 Score=190.55 Aligned_cols=214 Identities=17% Similarity=0.197 Sum_probs=157.4
Q ss_pred HHHcCceecCCCC-CCCHHHHHHHhhhhh--ccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCC
Q 022564 44 RQWKGLELIPSEN-FTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS 120 (295)
Q Consensus 44 ~~~~~i~L~~~~~-~~~~~v~~al~~~l~--~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~s 120 (295)
...+.+.|+.+.+ ++++.+++++.+.+. +.+ +++....+.......+..+.+++++++++|++++ +|++++
T Consensus 19 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~ 92 (423)
T 3lvm_A 19 AMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADPR----EIVFTS 92 (423)
T ss_dssp -CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEES
T ss_pred ccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC----eEEEeC
Confidence 3346677764444 679999999999887 544 3333211111223455666788999999999876 799999
Q ss_pred ChH-HHHHHHHhhcC----CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcC
Q 022564 121 GSP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR 195 (295)
Q Consensus 121 G~~-a~~~~~~al~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~ 195 (295)
|++ ++.+++.++.+ +||+|+++.+.|+++......+ ...|.++..+ +.+ +++.+|++++++++++ +
T Consensus 93 ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~ 163 (423)
T 3lvm_A 93 GATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-----EREGFEVTYL--APQ-RNGIIDLKELEAAMRD-D 163 (423)
T ss_dssp SHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-----HHTTCEEEEE--CCC-TTSCCCHHHHHHHCCT-T
T ss_pred ChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-----HHcCCEEEEe--ccC-CCCccCHHHHHHhcCC-C
Confidence 988 88878887763 8999999998888775433211 1335445444 455 4678999999999987 8
Q ss_pred CcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 196 PKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 196 tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
+++|+++++++ |...|+++|.++|++||+++|+|++|+.+..+.+....+ +|++++|+||++ ||.| |++++++
T Consensus 164 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~---~di~~~s~sK~~-g~~g~G~~~~~~ 239 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLK---VDLMSFSGHKIY-GPKGIGALYVRR 239 (423)
T ss_dssp EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSC---CSEEEEESTTTT-SCSSCEEEEECB
T ss_pred cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcC---CCEEEechHHhc-CCCCeEEEEEec
Confidence 89998875544 588899999999999999999999999887655544444 899999999954 6776 9999997
Q ss_pred Cchh
Q 022564 273 GVKE 276 (295)
Q Consensus 273 ~~~~ 276 (295)
+..+
T Consensus 240 ~~~~ 243 (423)
T 3lvm_A 240 KPRV 243 (423)
T ss_dssp TTBC
T ss_pred cccC
Confidence 7543
No 17
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.90 E-value=8.3e-23 Score=185.44 Aligned_cols=202 Identities=13% Similarity=0.065 Sum_probs=153.5
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+.+.++...+++++.+++.+.+.+.| + ....++.+++++++++++|++++. ++++++|++ ++..
T Consensus 36 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~--~~~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 36 LLLGPGPSNAHPSVLQAMNVSPVGHL----------D--PAFLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAMEA 100 (393)
T ss_dssp EECSSSCCCCCHHHHHHHSSCCCCTT----------S--HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHhccccccc----------C--HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHHH
Confidence 44455666789999999987664322 1 124567778899999999997632 699999998 8888
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++.+++++||+|+++++.|.+. . +...+...|.++..++ .+ .++.+|++++++++++.++++|+++.+++
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~--~----~~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 171 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGN--R----LVDMAGRYGADVRTIS--KP-WGEVFSLEELRTALETHRPAILALVHAETS 171 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHH--H----HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHhccCCCCEEEEEcCChhHH--H----HHHHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHhhCCceEEEEeccCCC
Confidence 8899999999999999777662 0 1112334565554454 54 45789999999999754789999885544
Q ss_pred -CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 207 -ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
|...|+++|.++|+++|+++|+|++|+.|..+.++... ++|++++|+||+|++|.+ |++++++++.+.
T Consensus 172 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~ 241 (393)
T 1vjo_A 172 TGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW---GVDLAYSCSQKGLGCSPGASPFTMSSRAIEK 241 (393)
T ss_dssp TTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCSCSSCEEEEECHHHHHH
T ss_pred cceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc---CccEEEEcCcccccCCCceEEEEECHHHHHH
Confidence 47789999999999999999999999977655444333 489999999999998888 999999886543
No 18
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.89 E-value=1.1e-22 Score=184.56 Aligned_cols=200 Identities=14% Similarity=0.095 Sum_probs=149.5
Q ss_pred ceec-CCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 49 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 49 i~L~-~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
+.|. ++...+++.+++++.+.+.+.+ + .........+++++++++|++++ +|++|+|++ ++.
T Consensus 10 ~yl~~~~~~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~ 73 (392)
T 2z9v_A 10 VITLTAGPVNAYPEVLRGLGRTVLYDY-----------D-PAFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLE 73 (392)
T ss_dssp SEECSSSCCCCCHHHHHHTTSCCCCTT-----------S-HHHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHH
T ss_pred ceeecCCCcCCCHHHHHHHhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHH
Confidence 4444 3444678999999987664311 0 12234455678999999999865 799999988 888
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEcCCC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAGASA 205 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~~~n 205 (295)
.++.+++++||+|+++.+.|.++. ... .+...|.++..++ .+ +++.+|++++++++++ .++++|+++.++
T Consensus 74 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 144 (392)
T 2z9v_A 74 AAAASLISPDDVVLNLASGVYGKG--FGY----WAKRYSPHLLEIE--VP-YNEAIDPQAVADMLKAHPEITVVSVCHHD 144 (392)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHH--HHH----HHHHHCSCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHHhcCCCCEEEEecCCcccHH--HHH----HHHHcCCceEEee--CC-CCCCCCHHHHHHHHhcCCCCcEEEEeccC
Confidence 788888999999999998777652 111 1123455555554 44 3467999999999953 378999887555
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
| |...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||+++||.| |++++++++.+
T Consensus 145 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~ 215 (392)
T 2z9v_A 145 TPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC---KADIYVTGPNKCLGAPPGLTMMGVSERAWA 215 (392)
T ss_dssp GGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG---TCSEEEECSSSTTCCCSCCEEEEECHHHHH
T ss_pred CCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc---cceEEEecCcccccCCCceeEEEECHHHHH
Confidence 4 57889999999999999999999999987665443332 389999999999999988 99999988654
No 19
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.89 E-value=1.6e-22 Score=183.01 Aligned_cols=204 Identities=14% Similarity=0.128 Sum_probs=153.1
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
.+.+.++...+++.+.+++.+.+...+ .........++++++++++|.+.+. .|++++|++ ++.
T Consensus 24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~al~ 88 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLRMIGHM------------QKEMLQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCAME 88 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTHHH
T ss_pred ceeccCCCCCCCHHHHHHhcccccCcc------------cHHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHHHH
Confidence 456777777889999999977432211 1223456667889999999987542 588888888 888
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
.++.+++++||+|+++.+.|.+.. ....+...|..+..++ .+ .++.+|++++++++++.++++|++++++|
T Consensus 89 ~~~~~~~~~gd~vl~~~~~~~~~~------~~~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 159 (393)
T 3kgw_A 89 TALFNLLEPGDSFLTGTNGIWGMR------AAEIADRIGARVHQMI--KK-PGEHYTLQEVEEGLAQHKPVLLFLVHGES 159 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH------HHHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHhcCCCCCEEEEEeCCchhHH------HHHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCcEEEEeccCC
Confidence 889999999999999875442210 0112334565554454 44 45689999999999866899999985555
Q ss_pred --CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 207 --ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 207 --~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
|...|+++|.++|++||+++|+|++|+.|....+....+ +|++++|+||+|+||.| |++++++++.+..
T Consensus 160 ptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~---~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~ 231 (393)
T 3kgw_A 160 STGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQG---IDIMYSSSQKVLNAPPGISLISFNDKAKYKV 231 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTT---CCEEEEESSSTTCCCSSCEEEEECHHHHHHH
T ss_pred cchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcC---CCEEEecCcccccCCCceeEEEECHHHHHHH
Confidence 478899999999999999999999999886665554444 89999999999988888 9999998865543
No 20
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=1e-22 Score=183.75 Aligned_cols=205 Identities=17% Similarity=0.236 Sum_probs=150.1
Q ss_pred eecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 50 ELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 50 ~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
.|+.+.+ .+++++++++.+.+.+.| +.+...+ ............+++++++++|++++ +|++++|++ ++..
T Consensus 4 yld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~ 76 (384)
T 1eg5_A 4 YFDNNATTRVDDRVLEEMIVFYREKY--GNPNSAH-GMGIEANLHMEKAREKVAKVLGVSPS----EIFFTSCATESINW 76 (384)
T ss_dssp ECBTTTCCCCCHHHHHHHHHHHHTCC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHHTSCGG----GEEEESCHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHhcC--CCCcccc-HHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEECCHHHHHHH
Confidence 4444443 679999999999887644 2222111 00011234455677999999998875 799999988 8887
Q ss_pred HHHhhc----CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 128 VYTALL----KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 128 ~~~al~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++.++. ++||+|+++.+.|+++...... +...|.++ +.++.+ +++.+|++++++++++ ++++|+++.
T Consensus 77 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~-----~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 77 ILKTVAETFEKRKRTIITTPIEHKAVLETMKY-----LSMKGFKV--KYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp HHHHHHHHTTTTCCEEEECTTSCHHHHHHHHH-----HHHTTCEE--EECCBC-TTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHhhhhhccCCCCEEEECCCCchHHHHHHHH-----HHhcCCEE--EEEccC-CCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 888887 8999999999888776443321 12345444 444455 4678999999999987 899999975
Q ss_pred CCC--CCccCHHHHHHHHHHcC--CEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 204 SAY--ARLYDYERIRKVCNKQK--AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~~~--~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
+++ |...|+++|.++|++|| +++|+|++|+.|..+.++... ++|++++|+||+ .||.| |++++++++
T Consensus 148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~-~g~~G~G~~~~~~~~ 219 (384)
T 1eg5_A 148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKF-HGPKGVGITYIRKGV 219 (384)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGG-TSCTTCEEEEECTTS
T ss_pred CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhc---CCCEEEecHHHh-cCCCceEEEEEcCCC
Confidence 554 57889999999999999 999999999877654443332 489999999997 46777 999999876
No 21
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.89 E-value=3e-23 Score=185.26 Aligned_cols=195 Identities=13% Similarity=0.058 Sum_probs=148.7
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+++.++..++++.+++++.+.+...+ + .........+++++++++|++++ ++++++|++ ++..
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~----~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHHR-----------T-EAAREVFLKARGLLREAFRTEGE----VLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCTT-----------S-HHHHHHHHHHHHHHHHHHTCSSE----EEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCcc-----------C-HHHHHHHHHHHHHHHHHhCCCCc----eEEEcCchHHHHHH
Confidence 56778888899999999988764311 0 12234455678999999999865 899999988 8888
Q ss_pred HHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-
Q 022564 128 VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY- 206 (295)
Q Consensus 128 ~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~- 206 (295)
++.+++++||+|+++++.|+++. ... .+...|.++..++ .+ .++.+|++++++ + ++++|+++.++|
T Consensus 67 ~~~~~~~~gd~vl~~~~~~~~~~-~~~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~---~-~~~~v~~~~~~np 133 (352)
T 1iug_A 67 LVKNLFAPGERVLVPVYGKFSER-FYE-----IALEAGLVVERLD--YP-YGDTPRPEDVAK---E-GYAGLLLVHSETS 133 (352)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHH-HHH-----HHHHTTCEEEEEE--CC-TTCCCCTTTSCC---S-SCSEEEEESEETT
T ss_pred HHHhccCCCCeEEEEeCCchhHH-HHH-----HHHHcCCceEEEe--CC-CCCCCCHHHHhc---c-CCcEEEEEEecCC
Confidence 88999999999999998777763 111 1123454454454 44 456789998877 3 899999885555
Q ss_pred -CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 207 -ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 207 -~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
|...|+++|.++|++| |+++|+|++|+.|..+.+.... ++|++++|+|||++||.| |+++++++..
T Consensus 134 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 203 (352)
T 1iug_A 134 TGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM---GVDAAASGSQKGLMCPPGLGFVALSPRAL 203 (352)
T ss_dssp TTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG---TCSEEEEESSSTTCCCSCEEEEEECHHHH
T ss_pred cceecCHHHHHHHHHhhCCCCEEEEECCccccCcceecccc---CeeEEEecCcccccCCCceeEEEECHHHH
Confidence 5788999999999999 9999999999887665443322 389999999999999988 9999988754
No 22
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.89 E-value=2.3e-22 Score=182.54 Aligned_cols=203 Identities=13% Similarity=0.121 Sum_probs=151.9
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
.++++++...+++.+.+++.+.+...| ..........+++.+++++|.+++. +|++++|++ ++.
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~ 83 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGME 83 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHH
Confidence 456666666788999999877553311 1223344556789999999997742 699999988 888
Q ss_pred HHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 127 QVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
.++.+++++||+|+++++.|.++. . ...+...|..+..++ .+ .++.+|++++++++++.++++|+++.+++
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 154 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAER--A----VEMSERYGADVRTIE--GP-PDRPFSLETLARAIELHQPKCLFLTHGDS 154 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--H----HHHHHHTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCeEEEEcCCcccHH--H----HHHHHHcCCceEEec--CC-CCCCCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 888999999999999997777652 1 012234565554454 44 45789999999999754799999985554
Q ss_pred --CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 207 --ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 207 --~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
|...|+++|.++|+++|+++|+|++|+.|..+.+.... ++|++++|+||++++|.| |++++++++.+.
T Consensus 155 ptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~ 225 (396)
T 2ch1_A 155 SSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW---EIDAVYTGAQKVLGAPPGITPISISPKALDV 225 (396)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCCEEECCCC-CCCCCSSCEEEEECHHHHHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc---CcCEEEEcCCccccCCCCeEEEEECHHHHHh
Confidence 47888999999999999999999999987665444333 389999999999999988 999998876543
No 23
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=5.6e-23 Score=186.86 Aligned_cols=212 Identities=15% Similarity=0.141 Sum_probs=154.8
Q ss_pred CceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a 124 (295)
.+.|..+.+ ++++.+.+++.+.+.+.+ +++....+............+++.+++++|. +++ +|++++|++ +
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSAE----ELVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC----eEEEeCChhHH
Confidence 577776655 468999999999887632 2222100000011234455677999999998 554 799999998 8
Q ss_pred HHHHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 125 NFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 125 ~~~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
+..++.++ +++||+|+++.+.|.+....+.. .+...|.++..++ .+ +++.+|++++++++++ ++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~-~~~~v~ 169 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGAELRVIP--LN-PDGTLQLETLPTLFDE-KTRLLA 169 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTCEEEEEC--BC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHH----HHHhCCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence 88888888 89999999999988887543221 1223454454444 44 4578999999999986 899998
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
++++++ |...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||++ ||.| |++++++++.+.
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~~~~~~~~~~~ 245 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKEALLQE 245 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHHHHHH
T ss_pred EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CCCEEEEEchhcc-CCCCcEEEEEeHHHHhh
Confidence 875444 57889999999999999999999999887654332222 3899999999987 7888 999999876554
No 24
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=5.2e-23 Score=185.71 Aligned_cols=198 Identities=16% Similarity=0.185 Sum_probs=147.5
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc-
Q 022564 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL- 133 (295)
Q Consensus 56 ~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~- 133 (295)
.++++.+++++.+.+.+.+ +++.+. |...........++++++++++|++++ ++++++|++ ++..++.++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~~~~~l~~ 82 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESF--GNPSSV-HSYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSC--CCTTCS-SHHHHHHHHHHHHHHHHHHHHHTCTTE----EEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcc--CCCCCC-cHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEcCchHHHHHHHHHHHHh
Confidence 4679999999999887633 333321 221123345666788999999999875 899999988 8887888887
Q ss_pred ---CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CC
Q 022564 134 ---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--AR 208 (295)
Q Consensus 134 ---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~ 208 (295)
++||+|+++++.|+++......+ ...|.++..++ ++ +++.+|++++++++++ ++++|+++.++| |.
T Consensus 83 ~~~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 153 (382)
T 4eb5_A 83 RNARKGKHILVSAVEHMSVINPAKFL-----QKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGT 153 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHHH-----TTTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCB
T ss_pred hccCCCCEEEECCCcchHHHHHHHHH-----HhCCcEEEEec--cC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCccc
Confidence 89999999998888775433211 12354454444 55 4678999999999986 889888875554 57
Q ss_pred ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 209 LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 209 ~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
..|+++|.++|++||++ |+|++|+.|..+.++... ++|++++|+||+ .||.| |+++++++.
T Consensus 154 ~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~ 215 (382)
T 4eb5_A 154 IQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEA 215 (382)
T ss_dssp BCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGG-TCCSSCEEEEEETTC
T ss_pred cCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHh-cCCCceEEEEEcccc
Confidence 88999999999999999 999999977554332212 389999999997 57877 999998873
No 25
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.89 E-value=1.4e-22 Score=182.73 Aligned_cols=206 Identities=17% Similarity=0.093 Sum_probs=152.3
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
...+++++...+++++++++.+.+...+ .....++.+++++++++++|++.+. ..+++++|++ ++
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~g~~~~~--~~i~~~~ggt~al 84 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR------------TTEFSSTMLENEKFMLEYAKAPEGS--KAVFMTCSSTGSM 84 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS------------SHHHHHHHHHHHHHHHHHHTCCTTC--EEEEESSCHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC------------CHHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCChhHHH
Confidence 4578888888899999999987553211 1233466677889999999997532 1355588867 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
..++.+++++||+|+++++.+.++... ..+...|..+..++ .+ .++.+|++++++++++ +++++++++++
T Consensus 85 ~~~~~~~~~~gd~vi~~~~~~~~~~~~------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~ 154 (376)
T 3f0h_A 85 EAVVMNCFTKKDKVLVIDGGSFGHRFV------QLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDE 154 (376)
T ss_dssp HHHHHHHCCTTCCEEEEESSHHHHHHH------HHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESEE
T ss_pred HHHHHhccCCCCeEEEEeCChhhHHHH------HHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEeccc
Confidence 878899999999999998544443210 11223455555554 44 4578999999998866 89999998554
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhhc
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINK 279 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~~ 279 (295)
+ |...|+++|.++|++||+++|+|++|+.+....+.... ++|++++|+||+|+||.| |++++++++.+...
T Consensus 155 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~ 228 (376)
T 3f0h_A 155 TSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC---GADVMITGSQKVLACPPGISVIVLAPRGVERVE 228 (376)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHH
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc---CccEEEecCcccccCCCceEEEEECHHHHHHhh
Confidence 4 47889999999999999999999999887665433322 389999999999987888 99999988765443
No 26
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.89 E-value=6.5e-23 Score=187.39 Aligned_cols=210 Identities=13% Similarity=0.119 Sum_probs=153.0
Q ss_pred CceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCC--cccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH
Q 022564 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGA--RYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~--~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~ 123 (295)
.++|+.+++ .+|+.+.+++.+.+.+.. +++.. ..|+ .........+++.+++++|. +++ ++++++|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~--~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t 100 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLS--VRATDAYEAVRNKVAKFINARSPR----EIVYTRNAT 100 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHH--HHHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHH--HHHHHHHHHHHHHHHHHcCCCCCC----eEEEcCChH
Confidence 678877766 468999999999886622 22221 1111 11123445577999999998 554 789999988
Q ss_pred -HHHHHHHhh----cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 124 -SNFQVYTAL----LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 124 -a~~~~~~al----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
++..++.++ +++||+|+++.+.|++...+... .+...|.++..++ .+ +++.+|++++++++++ ++++
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~ 172 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQM----VAAKTGAVLKFVQ--LD-EQESFDLEHFKTLLSE-KTKL 172 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHCCEEEEEC--BC-TTSSBCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHH----HHHhcCcEEEEec--cC-CCCCcCHHHHHHhhCC-CceE
Confidence 888888998 89999999999888886432211 1223455454444 54 5678999999999987 8999
Q ss_pred EEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 199 IVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 199 i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
|+++.+++ |...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||. .||.| |++++++++.
T Consensus 173 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~-~~~~g~G~~~~~~~~~ 248 (420)
T 1t3i_A 173 VTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKM-CAPTGIGFLYGKEEIL 248 (420)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGT-TSCTTCEEEEECHHHH
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhh-cCCCceEEEEEchHHH
Confidence 98875544 57889999999999999999999999987654332222 389999999995 46766 9999998765
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 249 ~~ 250 (420)
T 1t3i_A 249 EA 250 (420)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 27
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.89 E-value=1.1e-22 Score=181.44 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=149.1
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEeCCChH-HH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~~sG~~-a~ 125 (295)
+++++|..++++.+++++.+.+...+ + ........++++++++++|++ ++ ++++|+|++ ++
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~g~~~~~~----~v~~t~g~t~a~ 65 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGHL---------D---PEVLRVNRAIQERLAALFDPGEGAL----VAALAGSGSLGM 65 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCTT---------C---HHHHHHHHHHHHHHHHHHCCCTTCE----EEEESSCHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccccc---------C---HHHHHHHHHHHHHHHHHhCCCCCCc----eEEEcCCcHHHH
Confidence 46788888899999999987664311 1 223455667889999999986 43 799999988 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
..++.++++ |+|++++++|+++ ... ..+...|.++..++ .+ +++.+|++++++++++.++++|+++.++
T Consensus 66 ~~~~~~~~~--d~vl~~~~~~~~~--~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~ 134 (353)
T 2yrr_A 66 EAGLANLDR--GPVLVLVNGAFSQ--RVA----EMAALHGLDPEVLD--FP-PGEPVDPEAVARALKRRRYRMVALVHGE 134 (353)
T ss_dssp HHHHHTCSC--CCEEEEECSHHHH--HHH----HHHHHTTCCEEEEE--CC-TTSCCCHHHHHHHHHHSCCSEEEEESEE
T ss_pred HHHHHHhcC--CcEEEEcCCCchH--HHH----HHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHHhCCCCEEEEEccC
Confidence 878888876 8999998777765 111 11234455555554 44 4578999999999975478999887555
Q ss_pred C--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 206 Y--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
| |...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||+++||.| |++++++++.+.
T Consensus 135 nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~ 206 (353)
T 2yrr_A 135 TSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLEARKA 206 (353)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHHHHHH
T ss_pred CCcceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHHHHHH
Confidence 4 57889999999999999999999999776543322111 379999999999999888 999999886543
No 28
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.89 E-value=8e-22 Score=178.40 Aligned_cols=203 Identities=14% Similarity=0.070 Sum_probs=150.8
Q ss_pred eecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHH
Q 022564 50 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQV 128 (295)
Q Consensus 50 ~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~ 128 (295)
.+......+++++.+++.+.+.+.+ +++. ......++++++++++++++|++++ +|++++|++ ++..+
T Consensus 34 ~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~----~i~~~~ggt~a~~~~ 102 (397)
T 3f9t_A 34 IFGSMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNKDA----YGHIVSGGTEANLMA 102 (397)
T ss_dssp BCSCSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCTTC----EEEEESCHHHHHHHH
T ss_pred eEEEecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCC----CEEEecCcHHHHHHH
Confidence 3444455678899999998876533 2111 1234577888899999999999876 888999998 88878
Q ss_pred HHhhcCC-------------CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcC
Q 022564 129 YTALLKP-------------HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR 195 (295)
Q Consensus 129 ~~al~~~-------------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~ 195 (295)
+.++..+ ||+|+++.+.|+++.. .+...|.++..++ .+ +++.+|++++++++++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~ 171 (397)
T 3f9t_A 103 LRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYAP--IK-EDYTIDEKFVKDAVEDYD 171 (397)
T ss_dssp HHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEEC--BC-TTSSBCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEEe--eC-CCCcCCHHHHHHHHhhcC
Confidence 8888665 9999999988777543 3335565554454 55 468899999999997647
Q ss_pred CcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC---------CCCCC-cceEEEeCCCCCCCCC
Q 022564 196 PKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI---------PSPFE-YADVVTTTTHKSLRGP 263 (295)
Q Consensus 196 tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~---------~~~~~-~~D~~~~s~~K~l~gp 263 (295)
+++++++.+++ |...|+++|.++|++||+++|+|++|+.+.++.... +..+. ++|++++|+||++++|
T Consensus 172 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~ 251 (397)
T 3f9t_A 172 VDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCP 251 (397)
T ss_dssp CCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCC
T ss_pred CeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCC
Confidence 88888874444 478899999999999999999999998765532211 11111 4899999999999777
Q ss_pred ce-EEEEEeCCc
Q 022564 264 RG-AMIFFRKGV 274 (295)
Q Consensus 264 ~g-G~l~~~~~~ 274 (295)
.+ |+++++++.
T Consensus 252 ~~~g~~~~~~~~ 263 (397)
T 3f9t_A 252 IPSGGILFKDIG 263 (397)
T ss_dssp SSCEEEEESSGG
T ss_pred CCceEEEEeCHH
Confidence 66 888887763
No 29
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.89 E-value=3.7e-23 Score=188.09 Aligned_cols=205 Identities=15% Similarity=0.152 Sum_probs=152.8
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
+.+.|+.+.+ ++++.+++++.+.+.+.+ +++... +.......+..+++++++++++|++++ +|++++|++ +
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSR-HEYGIRAKRGVERAREYLASTVSAEPD----ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCH-HHHHHHHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCccc-chhHHHHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence 3466654444 578999999999887533 333221 111223455667788999999999876 799999998 8
Q ss_pred HHHHHHhhc----CCCC-eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 125 NFQVYTALL----KPHD-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 125 ~~~~~~al~----~~gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
+..++.+++ ++|| +|+++.++|+++......+ ...|.++..++ .+ +++.+|++++++++++ ++++|
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v 163 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-----AGRGFEVDFLT--PG-PSGRISVEGVMERLRP-DTLLV 163 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-----HTTTCEEEEEC--CC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-----HhcCCeEEEEc--cC-CCCCcCHHHHHHhcCC-CceEE
Confidence 887888887 8999 9999998888875544322 12354454444 55 4688999999999987 89999
Q ss_pred EEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEE-EeC
Q 022564 200 VAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRK 272 (295)
Q Consensus 200 ~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~-~~~ 272 (295)
+++.++| |...|+++|.++|++||+++|+|++|+.+....+.... +|++++|+|| +.||.| |+++ +++
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~----~d~~~~s~~K-~~g~~g~g~~~~~~~ 235 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP----IDMISISGHK-IGAPKGVGALVTRRR 235 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC----CSEEEEETGG-GTSCSSCEEEEECBC
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc----CcEEEEeHHH-hCCCCceEEEEEecc
Confidence 8885555 47889999999999999999999999987765443221 7899999999 567877 9999 887
No 30
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.88 E-value=3.8e-23 Score=188.51 Aligned_cols=211 Identities=13% Similarity=0.082 Sum_probs=153.5
Q ss_pred CceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 48 ~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
.+.|+.+.+ .+++.+++++.+.+.+.+ +++... |...........++++++++++|++++ +|++++|++ ++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al 99 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGA-HPSARRSAAVLDAAREAVADLVNADPG----GVVLGADRAVLL 99 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSS-SHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCc-cHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence 466665544 578999999999887532 222221 111112345566688999999999865 799999999 77
Q ss_pred HHHHHhh---cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 126 FQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 126 ~~~~~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
..++.++ +++||+|+++.++|+++..+...+. ...|.++..++ ++++++.+|+++|++++++ ++++|+++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~----~~~g~~v~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAA----HRYGAKVKWAE--VDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHH----HHHBCEEEEEC--CCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHH----HhcCCeEEEEe--cCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 7677777 7899999999998888755433111 11454454444 5445678999999999986 89999987
Q ss_pred CCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceE-EEEEeCCchh
Q 022564 203 ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKE 276 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG-~l~~~~~~~~ 276 (295)
.+++ |...|+++|.++|+++|+++|+|++|+.|..+.+.... ++|++++|+||++ ||.+| ++++++++.+
T Consensus 173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~~~~~~~~~~~ 245 (406)
T 3cai_A 173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET---DADVVTVNAHAWG-GPPIGAMVFRDPSVMN 245 (406)
T ss_dssp SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH---CCSEEEEEGGGGT-SCSCEEEEESCHHHHH
T ss_pred CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc---CCCEEEeehhhhc-CCCcCeEEEEehHHHh
Confidence 5544 58889999999999999999999999887654433222 3899999999976 56677 9999887654
No 31
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.88 E-value=3.8e-22 Score=180.55 Aligned_cols=214 Identities=15% Similarity=0.150 Sum_probs=155.3
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCC-cccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.+.|+.+.. ++++.+++++.+.+.+.. ...+.. ..|. ........+++.+++++|++++ +|++++|++
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~---~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~ 87 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQ---HIQQLIAQLRQALAETFNVDPN----TITITDNVTT 87 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHH---HHHHHHHHHHHHHHHHTTSCGG----GEEEESSHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHH---HHHHHHHHHHHHHHHHcCCCHH----HEEEeCChHH
Confidence 3567765544 457889999998876521 001110 0111 1123455677999999999875 789999988
Q ss_pred HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.++ +++||+|+++.+.|+++....... +...|.++..++++.+ +++.+|++++++++++ ++++|+++
T Consensus 88 a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 88 GCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAI----AARFGITYRFFPVAAT-LNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp HHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHH----HHHHCCEEEEECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred HHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHH----HHHhCcEEEEEcCCCC-CCccchHHHHHHhcCC-CceEEEEe
Confidence 888788888 899999999998888765332111 1234555544543211 3578999999999986 89999998
Q ss_pred CCCC--CCccCHHHHHHHHH----HcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 203 ASAY--ARLYDYERIRKVCN----KQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~----~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
.+++ |...|+++|.++|+ +||+++|+|++|+.|..+.++... +.|++++|+|||+.||.| |++++++++.
T Consensus 162 ~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 238 (390)
T 1elu_A 162 HLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRL---EVDYYAFTGHKWFAGPAGVGGLYIHGDCL 238 (390)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTS---CCSEEEEESSSTTCCCTTCEEEEECTTTG
T ss_pred ccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhc---CCCEEEccccccccCCCceEEEEECHHhH
Confidence 5555 47889999999999 999999999999988765544333 389999999998888888 9999998876
Q ss_pred hh
Q 022564 276 EI 277 (295)
Q Consensus 276 ~~ 277 (295)
+.
T Consensus 239 ~~ 240 (390)
T 1elu_A 239 GE 240 (390)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 32
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=2.8e-22 Score=184.18 Aligned_cols=226 Identities=15% Similarity=0.169 Sum_probs=154.9
Q ss_pred ccCHHHH---HHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhhcc--C--CCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 29 VVDPEIA---DIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNK--Y--SEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 29 ~~~~~~~---~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~~~--~--~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
.+++++. +.+.++..++...+.+.+.+|. +.|++++.+..... + ..+|+ |+. .. .+.+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~----Y~~-~g----~~~Le~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYG----YND-IG----RDSLDRVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTC----TTC-HH----HHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCC----CCc-hh----HHHHHHHH
Confidence 3456555 5555555555566666666654 78889988764321 1 11222 222 12 33455889
Q ss_pred HHHcCCCCCCcceeEE---eCCChHHHHHHHHhhcCCCCeEEEec-CCCCcccCccc---cccccccccceeeeEEEeee
Q 022564 102 LEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY---QTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 102 a~~~g~~~~~~~~~v~---~~sG~~a~~~~~~al~~~gd~Vl~~~-~~~~~~~~~~~---~~~~~~~~~~g~~~~~v~~~ 174 (295)
++++|.+. .++ +++|+.|+.+++.++++|||+|++.+ +.|+++..... ......+...|.++..+ +
T Consensus 84 A~l~g~e~-----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v--~ 156 (427)
T 3hvy_A 84 ANIFNTES-----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV--D 156 (427)
T ss_dssp HHHHTCSE-----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC--C
T ss_pred HHHhCCCc-----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe--c
Confidence 99999876 466 56776688889999999999999998 77776542110 00001122345444444 3
Q ss_pred cCCCCCCCCHHHHHHHHhh-cCCcEEEEcC----CCCC--CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCC
Q 022564 175 LNESTGYIDYDQLEKSATL-FRPKLIVAGA----SAYA--RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~-~~tk~i~l~~----~n~~--~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
. +++.+|++++++++++ .+||+|+++. ++++ ...|+++|.++|++ +|+++++|++|+.+.........
T Consensus 157 ~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~- 233 (427)
T 3hvy_A 157 L--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDV- 233 (427)
T ss_dssp C--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGG-
T ss_pred C--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCccc-
Confidence 4 3678999999999983 3899999975 6664 77899999999999 89999999998776532211112
Q ss_pred CCcceEEEeCCCCCCCC---CceEEEEEeCCchhh
Q 022564 246 FEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEI 277 (295)
Q Consensus 246 ~~~~D~~~~s~~K~l~g---p~gG~l~~~~~~~~~ 277 (295)
++|++++|+||+++| |.||++++++++.+.
T Consensus 234 --gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~ 266 (427)
T 3hvy_A 234 --GADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQ 266 (427)
T ss_dssp --TCSEEEEETTSGGGTTTCCSCEEEEECHHHHHH
T ss_pred --CCeEEEECCcccccccccceEEEEEECHHHHHH
Confidence 499999999999987 788999999876554
No 33
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=7.4e-22 Score=178.34 Aligned_cols=202 Identities=10% Similarity=0.050 Sum_probs=144.7
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC----CCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL----DPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~----~~~~~~~~v~~~sG~ 122 (295)
+.+.+.++...+++++.+++.+.+... ++ .........++++++++++. +++ +|++++|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~----~v~~~~g~ 68 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGH---TS---------PEFVSIFQRVLKNTRAVFKSAAASKSQ----PFVLAGSG 68 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCT---TS---------HHHHHHHHHHHHHHHHHTTCCGGGTCE----EEEEESCT
T ss_pred cceeecCCCcCchHHHHHHHhcccccc---CC---------HHHHHHHHHHHHHHHHHhCCCCCCCCc----eEEEcCch
Confidence 356788888888999999987654331 11 11122333455667776665 344 78888888
Q ss_pred H-HHHHHHHhhc---CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec-CCCCCCCCHHHHHHHHhhcCCc
Q 022564 123 P-SNFQVYTALL---KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-NESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 123 ~-a~~~~~~al~---~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~id~e~l~~~i~~~~tk 197 (295)
+ ++..++.++. ++||+|++++..+.... . ...+...|.++..++ . + +++.+|++++++++++.+++
T Consensus 69 t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~--~----~~~~~~~g~~~~~v~--~~~-~~~~~d~~~l~~~l~~~~~~ 139 (385)
T 2bkw_A 69 TLGWDIFASNFILSKAPNKNVLVVSTGTFSDR--F----ADCLRSYGAQVDVVR--PLK-IGESVPLELITEKLSQNSYG 139 (385)
T ss_dssp THHHHHHHHHHSCTTCSCCEEEEECSSHHHHH--H----HHHHHHTTCEEEEEC--CSS-TTSCCCHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCcchHH--H----HHHHHHcCCceEEEe--cCC-CCCCCCHHHHHHHHhcCCCC
Confidence 8 8887888887 89999988853222111 0 012234565554454 4 4 56789999999999754789
Q ss_pred EEEEcCCCC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 198 LIVAGASAY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 198 ~i~l~~~n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
+|+++.+++ |...|+++|.++|++| |+++|+|++|+.|..+.++... ++|++++|+||+++||.| |++++++
T Consensus 140 ~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~G~G~~~~~~ 216 (385)
T 2bkw_A 140 AVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEW---GVDFALTASQKAIGAPAGLSISLCSS 216 (385)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSCEEEEEECH
T ss_pred EEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccccccc---CceEEEecCccccccCCcceEEEEcH
Confidence 999875544 5788999999999999 9999999999987765444333 389999999999999988 9999988
Q ss_pred Cchh
Q 022564 273 GVKE 276 (295)
Q Consensus 273 ~~~~ 276 (295)
+..+
T Consensus 217 ~~~~ 220 (385)
T 2bkw_A 217 RFMD 220 (385)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 34
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.88 E-value=1.6e-22 Score=181.91 Aligned_cols=209 Identities=15% Similarity=0.075 Sum_probs=146.6
Q ss_pred cCceecCC--CCCCCHHHHHHHhhhhhccCCCCCC--CCcccCCcchHHHHHHHHHHH-HHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPS--ENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKR-ALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~--~~~~~~~v~~al~~~l~~~~~~g~~--~~~~~~~~~~~~~l~~~~~~~-la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+.|+.+ .+++++.+.+++.+.+.......+. ....+....... .++++ +++++|.+ +|++++|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~la~~~~~~------~v~~~~g 77 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIH----DFIHNQLPKFLGCD------VARVTNG 77 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHH----HHHHTHHHHHTTSS------EEEEESS
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHH----HHHHHHHHHHcCCC------EEEEeCC
Confidence 45666543 4567999999999887652110110 111122223333 35588 99999876 5888999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh----cCC
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL----FRP 196 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~----~~t 196 (295)
++ ++..++.+++++||+|+++.+.|.++... +...|.++..++.+.+ +++.+|++++++++++ .++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 148 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVA--------AERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEV 148 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH--------HHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCE
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHH--------HHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCe
Confidence 87 88888899999999999999888777543 2355655544542244 4578999999999973 278
Q ss_pred cEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 197 KLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 197 k~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
++|+++.+++ |...|+++|.++|++||+++|+|++|+.|..+...... ++|++++|+||+|++|.+ |+++++++
T Consensus 149 ~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 149 VLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred EEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhc---CCCEEEecCCcCCCCCCCcEEEEEech
Confidence 9988875544 47889999999999999999999999987654332222 389999999999988777 99999988
Q ss_pred chhh
Q 022564 274 VKEI 277 (295)
Q Consensus 274 ~~~~ 277 (295)
+.+.
T Consensus 226 ~~~~ 229 (371)
T 2e7j_A 226 WAEI 229 (371)
T ss_dssp TTTT
T ss_pred hhhh
Confidence 6543
No 35
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.88 E-value=6.5e-22 Score=179.43 Aligned_cols=229 Identities=14% Similarity=0.092 Sum_probs=162.0
Q ss_pred cccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
++..+++..+..+.+......+.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~ 78 (389)
T 1gd9_A 6 RLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-TH------YGPNIGLLELREAIAEKLKK 78 (389)
T ss_dssp HHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHH
T ss_pred HhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CC------CCCCCCcHHHHHHHHHHHHH
Confidence 44455565555555543332467899888764 57899999998876521 12 33334567888888888888
Q ss_pred HcCC--CCCCccee-EEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-C
Q 022564 104 AFRL--DPEKWGVN-VQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-S 178 (295)
Q Consensus 104 ~~g~--~~~~~~~~-v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~ 178 (295)
.+|. +++ + |++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .+. +
T Consensus 79 ~~g~~~~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~ 144 (389)
T 1gd9_A 79 QNGIEADPK----TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVP--TYEED 144 (389)
T ss_dssp HHCCCCCTT----TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEE--CCGGG
T ss_pred HhCCCCCCC----CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cCCcc
Confidence 7784 555 6 99999988 8887888889999999999988877643 2335565555555 442 2
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccccC----CCCCC-CCc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP-FEY 248 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~-~~~ 248 (295)
++.+|++++++++++ ++++|+++.++| |... ++++|.++|++||+++|+|++|+.+..... +.... ..+
T Consensus 145 ~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 223 (389)
T 1gd9_A 145 EFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFE 223 (389)
T ss_dssp TTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred CCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCC
Confidence 467899999999986 889988875555 3444 599999999999999999999987654321 11111 124
Q ss_pred ceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 249 ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 249 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
.|+++.|+||+++.| +.|++++++++.+
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (389)
T 1gd9_A 224 RTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253 (389)
T ss_dssp GEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred CEEEEecChhhcCCcccceEEEEECHHHHH
Confidence 789999999988433 2499999877644
No 36
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=3.9e-22 Score=181.26 Aligned_cols=234 Identities=13% Similarity=0.087 Sum_probs=161.6
Q ss_pred hhccCcccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHH
Q 022564 21 KQLNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (295)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~ 94 (295)
++.+.++..++++.+..+...... .++.|+|..+++. +++.+.+++.+.+.... .+ |+...+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr 84 (389)
T 1o4s_A 12 HMVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VK------YTDPRGIYELR 84 (389)
T ss_dssp --CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CC------CCCTTCCHHHH
T ss_pred HHHHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHH
Confidence 344555555555444333333222 1367899888763 57899999988875421 12 33334567888
Q ss_pred HHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 95 SLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 95 ~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+++.+++.+.+|+ +++ +|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..+
T Consensus 85 ~~la~~~~~~~g~~~~~~----~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v 152 (389)
T 1o4s_A 85 EGIAKRIGERYKKDISPD----QVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVV 152 (389)
T ss_dssp HHHHHHHHHHHTCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCCHH----HEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEE
Confidence 8888888877786 554 799999998 8887888899999999999987777643 233556555545
Q ss_pred eeecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccC---CC
Q 022564 172 PYRLNE-STGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG---VI 242 (295)
Q Consensus 172 ~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~---~~ 242 (295)
+ .++ +++.+|++++++++++ ++++|+++.++| |...+ +++|.++|++||+++|+|++|+.+..... ..
T Consensus 153 ~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~ 229 (389)
T 1o4s_A 153 E--TFMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSIL 229 (389)
T ss_dssp E--CCGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHH
T ss_pred e--cCCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHh
Confidence 4 442 2568999999999976 889988875555 35544 99999999999999999999986554221 10
Q ss_pred CCC-CCcceEEEeCCCCCCCCCc--eEEEEEeCCchh
Q 022564 243 PSP-FEYADVVTTTTHKSLRGPR--GAMIFFRKGVKE 276 (295)
Q Consensus 243 ~~~-~~~~D~~~~s~~K~l~gp~--gG~l~~~~~~~~ 276 (295)
... ..+.|++++|+||+++.|. .|++++++++.+
T Consensus 230 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~ 266 (389)
T 1o4s_A 230 DVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVAT 266 (389)
T ss_dssp HHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred hcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHH
Confidence 000 1248999999999985333 499999887644
No 37
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.88 E-value=4.8e-22 Score=182.64 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHcCceecCCCCCCCHHHHHHHhhhhh-ccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCC
Q 022564 33 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMT-NKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK 111 (295)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~L~~~~~~~~~~v~~al~~~l~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~ 111 (295)
.+++.+.++..++...+...+.+|. +.|++++.+... .....+ .....|+. .. .+++++.+++++|++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~-~~gy~y~~-~~----~~~Le~~lA~l~g~e~-- 90 (427)
T 3i16_A 21 KLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTN-SSGYGYGD-IG----RDSLDAVYARVFNTES-- 90 (427)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCC-CCTTCTTC-HH----HHHHHHHHHHHHTCSE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCC-CCCCCCCH-HH----HHHHHHHHHHHhCCcc--
Confidence 3444444444444444555444443 678888876532 111111 11111222 22 3345588999999876
Q ss_pred cceeEE---eCCChHHHHHHHHhhcCCCCeEEEec-CCCCcccCccc-cc-c-ccccccceeeeEEEeeecCCCCCCCCH
Q 022564 112 WGVNVQ---SLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGY-QT-D-TKKISAVSIFFETMPYRLNESTGYIDY 184 (295)
Q Consensus 112 ~~~~v~---~~sG~~a~~~~~~al~~~gd~Vl~~~-~~~~~~~~~~~-~~-~-~~~~~~~g~~~~~v~~~~~~~~~~id~ 184 (295)
.++ +++|+.++..++.++++|||+|++.+ +.|+++....- .. . ...+...|.++ +.++.+ +++.+|+
T Consensus 91 ---alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~--~~v~~~-~~g~~D~ 164 (427)
T 3i16_A 91 ---ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINY--KQVDLK-EDGKPNL 164 (427)
T ss_dssp ---EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEE--EECCCC-TTSSCCH
T ss_pred ---eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEE--EEecCc-cCCCcCH
Confidence 466 67776688889999999999999998 88877642210 00 0 01122345444 444454 4578999
Q ss_pred HHHHHHHhh-cCCcEEEEcC----CCCC--CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCCCcceEEEeC
Q 022564 185 DQLEKSATL-FRPKLIVAGA----SAYA--RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (295)
Q Consensus 185 e~l~~~i~~-~~tk~i~l~~----~n~~--~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s 255 (295)
+++++++++ .+||+|+++. ++++ ...|+++|+++|++ +|+++++|++|+.+......... ++|++++|
T Consensus 165 e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~---gaDiv~~S 241 (427)
T 3i16_A 165 EEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDV---GADLIAGS 241 (427)
T ss_dssp HHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGG---TCSEEEEE
T ss_pred HHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcccc---CCeEEEec
Confidence 999999982 3899999975 6664 77899999999999 99999999998766532211112 49999999
Q ss_pred CCCCCCC---CceEEEEEeCCchhhh
Q 022564 256 THKSLRG---PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 256 ~~K~l~g---p~gG~l~~~~~~~~~~ 278 (295)
+||+++| |.||++++++++.+..
T Consensus 242 ~sK~lgg~g~~~gG~i~~~~~li~~l 267 (427)
T 3i16_A 242 LIKNIGGGIAPTGGYLAGTKDCIEKT 267 (427)
T ss_dssp TTSGGGTTTCCSCEEEEECHHHHHHH
T ss_pred CcccCCCCCCceEEEEEECHHHHHHH
Confidence 9999988 7889999998876543
No 38
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.88 E-value=7.9e-22 Score=176.67 Aligned_cols=203 Identities=13% Similarity=0.103 Sum_probs=145.1
Q ss_pred CceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHH
Q 022564 48 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNF 126 (295)
Q Consensus 48 ~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~ 126 (295)
.+++++|...+++++++++.+.+.+ + ++ .........+++++++++|.+.+. .++++++|++ ++.
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~-~---------~~--~~~~~~~~~l~~~la~~~g~~~~~--~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCT-W---------DD--DYNIGVVEQIRQQLTALATASEGY--TSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCT-T---------SH--HHHTTTHHHHHHHHHHHHCSSSSE--EEEEEESCHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcC-C---------CH--HHHHHHHHHHHHHHHHHhCCCCcC--cEEEEecChHHHHH
Confidence 5788888666899999998774321 0 10 000022334668888888842110 1688999988 888
Q ss_pred HHHHhhcCCCCeEEEec-CCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-CCcEEEEcCC
Q 022564 127 QVYTALLKPHDRIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-RPKLIVAGAS 204 (295)
Q Consensus 127 ~~~~al~~~gd~Vl~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-~tk~i~l~~~ 204 (295)
.++.+++++||+|++.+ +.|++.+ ...+...|.++..++ .+ .++.+|++++++++++. ++++|+++.+
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~~-------~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 140 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGARM-------VEMAGLMGIAHHAYD--CG-EVARPDVQAIDAILNADPTISHIAMVHS 140 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHHH-------HHHHHHHTCCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESE
T ss_pred HHHHHhcCCCCeEEEEeCCCccHHH-------HHHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCeEEEEEecc
Confidence 88899999999988776 3343321 112234465555554 44 45779999999999863 5788888754
Q ss_pred CC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 205 AY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 205 n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
++ |...|+++|.++|++||+++|+|++|+.|..+.++... ++|++++|+||+++||.| |++++++++.+.
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~ 213 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAAL---HIDYLISSANKCIQGVPGFAFVIAREQKLAA 213 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSSEEEEEEEHHHHTT
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcccccc---CccEEEecCcccccCCCceEEEEECHHHHHh
Confidence 44 57889999999999999999999999987765544333 389999999999989988 999999886543
No 39
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.87 E-value=1.3e-21 Score=177.60 Aligned_cols=232 Identities=13% Similarity=0.099 Sum_probs=159.5
Q ss_pred ccCcccccCHHHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
+++++..++++.+..+....... .+.|+|..+++. +++.+.+++.+.+.... .+ |+...+..+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TK------YAPPAGIPELREA 76 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHH
Confidence 34444555554444444432221 356899888773 57889999988775422 12 3333455788888
Q ss_pred HHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 97 ~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
+.+++.+.+|+ +++ +|++|+|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++
T Consensus 77 ia~~~~~~~g~~~~~~----~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~- 143 (385)
T 1b5p_A 77 LAEKFRRENGLSVTPE----ETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGGVVVEVE- 143 (385)
T ss_dssp HHHHHHHTTCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEE-
T ss_pred HHHHHHHHhCCCCChH----HEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee-
Confidence 88888887785 454 799999999 8887889999999999999977765533 3335565554554
Q ss_pred ecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCC
Q 022564 174 RLNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF 246 (295)
Q Consensus 174 ~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~ 246 (295)
.++ +++.+|++++++++++ ++++|+++.+||| .. .++++|+++|++||++||+|++++.......... ..+
T Consensus 144 -~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 221 (385)
T 1b5p_A 144 -TLPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV 221 (385)
T ss_dssp -CCGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT
T ss_pred -cCcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHc
Confidence 443 3568999999999976 7899988755554 44 4488999999999999999999875433211000 001
Q ss_pred C-cceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 247 E-YADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 247 ~-~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
. +.++++.|++|+++.| +.|++++++++.+
T Consensus 222 ~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~ 254 (385)
T 1b5p_A 222 APEHTLTVNGAAKAFAMTGWRIGYACGPKEVIK 254 (385)
T ss_dssp CTTTEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred CCCCEEEEEechhhcCCcccceEEEEeCHHHHH
Confidence 1 3678999999988533 3599999876543
No 40
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.87 E-value=2.6e-22 Score=184.64 Aligned_cols=214 Identities=14% Similarity=0.142 Sum_probs=141.4
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
+.+.|+.+.+ .+++.+++++.+.+.+.+ +++... |.......+....+++++++++|++++ +|++++|++ +
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 90 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSS-YVAGRKAKDIINTARASLAKMIGGKPQ----DIIFTSGGTES 90 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCS-SHHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccC-cHHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence 4577776655 578999999999886533 444422 221122345566788999999999775 799999988 8
Q ss_pred HHHHHHhhc--------CCCCeEEEecCCCCcccCccc-----cc----cccccccceeeeEEEeeecCCCCCCCCHHHH
Q 022564 125 NFQVYTALL--------KPHDRIMALDLPHGGHLSHGY-----QT----DTKKISAVSIFFETMPYRLNESTGYIDYDQL 187 (295)
Q Consensus 125 ~~~~~~al~--------~~gd~Vl~~~~~~~~~~~~~~-----~~----~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l 187 (295)
+..++.+++ ++||+|+++.|.|.++..... .. ....+...|.++..++ .+.+++.+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~--~~~~~~~~d~~~l 168 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVP--VSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEEC--CCTTTSSCCHHHH
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEe--cCcccCCcCHHHH
Confidence 877777775 589988888876654310000 00 0001112355554444 5433678999999
Q ss_pred HHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcC----------CEEEEEccccccccccCCCCCCCCcceEEEeC
Q 022564 188 EKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQK----------AIMLADMAHISGLVAAGVIPSPFEYADVVTTT 255 (295)
Q Consensus 188 ~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~----------~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s 255 (295)
++++++ ++++|+++.+++ |...|+++|.++|++++ +++|+|++|+.|..+.+.... ++|++++|
T Consensus 169 ~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~~~~s 244 (432)
T 3a9z_A 169 LAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDFLTIV 244 (432)
T ss_dssp HHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSEEEEE
T ss_pred HHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCCEEEEe
Confidence 999986 899998885555 58899999999999999 999999999877543332212 38999999
Q ss_pred CCCCCCCCceEEEEEeCCc
Q 022564 256 THKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 256 ~~K~l~gp~gG~l~~~~~~ 274 (295)
+||++ ||+.|+++++++.
T Consensus 245 ~~K~~-g~~~G~~~~~~~~ 262 (432)
T 3a9z_A 245 GHKFY-GPRIGALYVRGVG 262 (432)
T ss_dssp GGGTT-CCSCEEEEETTBT
T ss_pred hhHhc-CCcceEEEEcccc
Confidence 99986 6878999999875
No 41
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.87 E-value=5.7e-21 Score=173.73 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=151.9
Q ss_pred HcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCC-CcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCC
Q 022564 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLS 120 (295)
Q Consensus 46 ~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~s 120 (295)
.+.|+|..+.+ .+++.+.+++.+.+.+.. +. ...|+...+..++++++.+++.+.+|. +++ +|++|+
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~----~i~~~~ 106 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD----SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD----NLYMTM 106 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC----HHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEES
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC----ccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH----HEEEcc
Confidence 36789987766 367899999998876510 00 011333345578888888999888885 554 899999
Q ss_pred ChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 121 GSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 121 G~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
|++ ++..++.+++++| |+|+++.+.|.++.. .+...|.++..++ .+.+++.+|++++++++++ ++++
T Consensus 107 g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~ 175 (398)
T 3ele_A 107 GAAASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGARLVEVP--ADTEHFQIDFDALEERINA-HTRG 175 (398)
T ss_dssp SHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--CCTTTSSCCHHHHHHTCCT-TEEE
T ss_pred CHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEe--cCCcCCcCCHHHHHHHhCc-CCCE
Confidence 998 8888899999999 999999977666543 3335565554444 5545679999999999987 8999
Q ss_pred EEEcCCCCC--CccC---HHHHHHHHHH------cCCEEEEEccccccccccCCCCC--CCCcceEEEeCCCCCCC--CC
Q 022564 199 IVAGASAYA--RLYD---YERIRKVCNK------QKAIMLADMAHISGLVAAGVIPS--PFEYADVVTTTTHKSLR--GP 263 (295)
Q Consensus 199 i~l~~~n~~--~~~~---l~~I~~ia~~------~~~~vivD~a~~~g~~~~~~~~~--~~~~~D~~~~s~~K~l~--gp 263 (295)
|+++.++|| ...+ +++|+++|++ ||+++|+|++|+.........+. ...+.++++.|++|+|+ |.
T Consensus 176 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 255 (398)
T 3ele_A 176 VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGE 255 (398)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTT
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccc
Confidence 999755553 5555 7777899999 99999999998764332211111 11236799999999985 33
Q ss_pred ceEEEEEeCCch
Q 022564 264 RGAMIFFRKGVK 275 (295)
Q Consensus 264 ~gG~l~~~~~~~ 275 (295)
+.|++++++++.
T Consensus 256 r~G~~~~~~~~~ 267 (398)
T 3ele_A 256 RIGYVLVPDEVY 267 (398)
T ss_dssp CCEEEECCTTST
T ss_pred eeEEEEEcchhh
Confidence 449999998754
No 42
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.87 E-value=5.4e-21 Score=177.26 Aligned_cols=197 Identities=10% Similarity=0.021 Sum_probs=144.2
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCC--cceeEEeCCChH-HHHHHHHhhc
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEK--WGVNVQSLSGSP-SNFQVYTALL 133 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~--~~~~v~~~sG~~-a~~~~~~al~ 133 (295)
++++.+.+++.+.+.... .. +...+...++++++++++++++|++.+. + ..+++++|++ ++..++.++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~--~~-----~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~-~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNW--ID-----KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQ-AVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSC-CEEEEESSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCC--CC-----hhhChhHHHHHHHHHHHHHHHhCCCcccccC-CceEEeCCHHHHHHHHHHHHH
Confidence 456788888888775422 11 2334567889999999999999997641 0 1388889988 8877777765
Q ss_pred C--------CC-----CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 134 K--------PH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 134 ~--------~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
. +| ++|++++ .|.++.. .+...|.++..++ ++++++.+|+++|++++++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~--------~~~~~G~~v~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWHK--------FARYWDVELREIP--MRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCHHHHH--------HHHHTTCEEEECC--CBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcHHHHH--------HHHHcCceEEEEe--cCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 3 55 5899887 6655533 3345665554454 5533689999999999987 888888
Q ss_pred EcCCCC--CCccCHHHHHHHHHHc------CCEEEEEccccccccc--cCC--CCCCCCcceEEEeCCCCCCCCCce-EE
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQ------KAIMLADMAHISGLVA--AGV--IPSPFEYADVVTTTTHKSLRGPRG-AM 267 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~--~~~--~~~~~~~~D~~~~s~~K~l~gp~g-G~ 267 (295)
++.+++ |...|+++|+++|+++ |+++++|+||+.+..+ ... ....+.++|++++++|||+.+|.+ |+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 875444 5889999999999996 9999999999876542 111 111233699999999999988877 99
Q ss_pred EEEeCC
Q 022564 268 IFFRKG 273 (295)
Q Consensus 268 l~~~~~ 273 (295)
++++++
T Consensus 273 ~~~~~~ 278 (452)
T 2dgk_A 273 VIWRDE 278 (452)
T ss_dssp EEESSG
T ss_pred EEEcCH
Confidence 999865
No 43
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.86 E-value=3.5e-21 Score=174.55 Aligned_cols=209 Identities=13% Similarity=0.068 Sum_probs=151.3
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
++.++|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+.+|+ +++ +|++++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g 98 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TR------YGPAAGEPRLREAIAQKLQRDNGLCYGAD----NILVTNG 98 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHhcCCCCChh----hEEEcCC
Confidence 357899888763 57899999988875421 11 333345678888888898888886 444 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .+. +++.+|++++++++++ ++++|
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v 167 (388)
T 1j32_A 99 GKQSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGTPVILP--TTVETQFKVSPEQIRQAITP-KTKLL 167 (388)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--CCGGGTTCCCHHHHHHHCCT-TEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCEEEEec--CCcccCCCCCHHHHHHhcCc-CceEE
Confidence 88 8888889999999999999987777543 2334565554454 432 2568999999999986 88999
Q ss_pred EEcCCCC--CCc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCC--CCC----CcceEEEeCCCCCCCCC--ceE
Q 022564 200 VAGASAY--ARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPF----EYADVVTTTTHKSLRGP--RGA 266 (295)
Q Consensus 200 ~l~~~n~--~~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~----~~~D~~~~s~~K~l~gp--~gG 266 (295)
+++.++| |.. .++++|.++|++||+++|+|++|+.+........ ..+ .+.|+++.|+||+++.| +.|
T Consensus 168 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G 247 (388)
T 1j32_A 168 VFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVG 247 (388)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCE
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceE
Confidence 8875555 344 4589999999999999999999876543221110 011 13789999999998433 359
Q ss_pred EEEEeCCchh
Q 022564 267 MIFFRKGVKE 276 (295)
Q Consensus 267 ~l~~~~~~~~ 276 (295)
++++++++.+
T Consensus 248 ~~~~~~~~~~ 257 (388)
T 1j32_A 248 FLAGPVPLVK 257 (388)
T ss_dssp EEECCHHHHH
T ss_pred EEEeCHHHHH
Confidence 9999887644
No 44
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.86 E-value=8.9e-21 Score=172.11 Aligned_cols=208 Identities=13% Similarity=0.050 Sum_probs=145.1
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
++.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+.+|. +++ +|++|+|
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~v~~t~g 99 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LG------YTVALGLPALRQRIARLYGEWYGVDLDPG----RVVITPG 99 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCCGG----GEEEESS
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCChHHHHHHHHHHHHHHhCCCCCHH----HEEEecC
Confidence 477999988874 47889999998876521 12 333344578888888888888884 554 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++.+ .++.+|+++++++ ++++|+
T Consensus 100 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~----~~~~v~ 166 (391)
T 3h14_A 100 SSGGFLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGLVPVDLPTAPE-NRLQPVPADFAGL----DLAGLM 166 (391)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECCGG-GTTSCCHHHHTTS----CCSEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeecCcc-cCCCCCHHHHHhc----CCeEEE
Confidence 99 8887889999999999999977666543 33455655555553322 2467899999876 689999
Q ss_pred EcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCCCcceEEEeCCCCCCC--CCceEEEEEeC
Q 022564 201 AGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPFEYADVVTTTTHKSLR--GPRGAMIFFRK 272 (295)
Q Consensus 201 l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~~~~D~~~~s~~K~l~--gp~gG~l~~~~ 272 (295)
++.++|+ ...+ +++|+++|++||+++|+|++|+........ ....+...++++.|++|+++ |.+.|++++++
T Consensus 167 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 246 (391)
T 3h14_A 167 VASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE 246 (391)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG
T ss_pred ECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH
Confidence 8755553 5555 889999999999999999998754332211 10111236688999999884 33449999988
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 247 ~~~~~ 251 (391)
T 3h14_A 247 DQVRV 251 (391)
T ss_dssp GGHHH
T ss_pred HHHHH
Confidence 86553
No 45
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.86 E-value=1.9e-22 Score=187.58 Aligned_cols=174 Identities=11% Similarity=0.072 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCe---EEEecCCCCcccCcccccc-ccccccceee
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDR---IMALDLPHGGHLSHGYQTD-TKKISAVSIF 167 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~---Vl~~~~~~~~~~~~~~~~~-~~~~~~~g~~ 167 (295)
+.+.+++++++++|++++ +|++++|++ ++..++.+++++||. |++..++|++...++.... ..++......
T Consensus 112 ~~~~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~ 187 (465)
T 3e9k_A 112 GDESIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESM 187 (465)
T ss_dssp TTHHHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHE
T ss_pred hHHHHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeee
Confidence 334567999999999876 899999999 777688888877665 9999999987644332111 1122221111
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
+...+ .+ +++.+|++++++++++ .++++|+++.++| |...|+++|.++|++||+++++|++|+.|..+.++..
T Consensus 188 v~~~~--~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~ 264 (465)
T 3e9k_A 188 RMIKP--RE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD 264 (465)
T ss_dssp EEECC--CT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH
T ss_pred EEEec--CC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh
Confidence 11222 23 5678999999999973 2789998885555 5889999999999999999999999999988766554
Q ss_pred CCCCcceEEEeCCCCCCC-CCce-EEEEEeCCchh
Q 022564 244 SPFEYADVVTTTTHKSLR-GPRG-AMIFFRKGVKE 276 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K~l~-gp~g-G~l~~~~~~~~ 276 (295)
.. +|++++|+||+++ ||.| |++++++++.+
T Consensus 265 ~~---~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~ 296 (465)
T 3e9k_A 265 WG---VDFACWCSYKYLNAGAGGIAGAFIHEKHAH 296 (465)
T ss_dssp HT---CCEEEECSSSTTCCCTTCCCEEEECGGGTT
T ss_pred cC---CCEEEECcccccccCCCceEEEEEcHHHHh
Confidence 44 9999999999994 8888 99999988754
No 46
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.86 E-value=7.7e-21 Score=169.90 Aligned_cols=204 Identities=17% Similarity=0.193 Sum_probs=148.6
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
..+.|+.+.+ .+++.+.+++.+.+.+ |..+ .+..++++++++++++++|++++ +|++++|++ +
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~----------~g~~~~~~~~~~~l~~~~g~~~~----~v~~~~g~t~a 78 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARDNMT-QHAG----------YGQDSHCAKAARLIGELLERPDA----DVHFISGGTQT 78 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHHTTC-CCCS----------TTCSHHHHHHHHHHHHHHTCTTS----EEEEESCHHHH
T ss_pred eeEEecCCCcCCCCHHHHHHHHHHHhh-cccc----------ccccHHHHHHHHHHHHHhCCCCc----cEEEeCCchHH
Confidence 3577765544 5689999999988754 3111 12245667788999999998876 899999999 8
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc------CCcE
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF------RPKL 198 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~------~tk~ 198 (295)
+..++.+++++||+|+++.+.|+++... . .+...|.++..++ .+ ++.+|++++++.+++. ++++
T Consensus 79 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~-~-----~~~~~g~~~~~v~--~~--~~~~d~~~l~~~l~~~~~~~~~~~~~ 148 (359)
T 1svv_A 79 NLIACSLALRPWEAVIATQLGHISTHET-G-----AIEATGHKVVTAP--CP--DGKLRVADIESALHENRSEHMVIPKL 148 (359)
T ss_dssp HHHHHHHHCCTTEEEEEETTSHHHHSST-T-----HHHHTTCCEEEEC--CT--TSCCCHHHHHHHHHHSCSTTSCEEEE
T ss_pred HHHHHHHHhCCCCEEEEcccchHHHHHH-H-----HHhcCCCeeEEEe--CC--CCeecHHHHHHHHHHHHhccCCCceE
Confidence 8888899999999999999888877553 1 1224455454444 43 5789999999999873 2889
Q ss_pred EEEcCCCC-CCccC---HHHHHHHHHHcCCEEEEEccc---cccccccCCCCCCC-CcceEEEeCCCCCCCCCce-EEEE
Q 022564 199 IVAGASAY-ARLYD---YERIRKVCNKQKAIMLADMAH---ISGLVAAGVIPSPF-EYADVVTTTTHKSLRGPRG-AMIF 269 (295)
Q Consensus 199 i~l~~~n~-~~~~~---l~~I~~ia~~~~~~vivD~a~---~~g~~~~~~~~~~~-~~~D~~~~s~~K~l~gp~g-G~l~ 269 (295)
|+++++|+ |...+ +++|.++|++||+++|+|++| +.|....+.....+ ..+|++++++||+ ++|.| |+++
T Consensus 149 v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~ 227 (359)
T 1svv_A 149 VYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA-GGMFGEALII 227 (359)
T ss_dssp EEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred EEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence 98875555 56666 889999999999999999998 44433322111000 1479999999996 67888 9999
Q ss_pred EeCCchh
Q 022564 270 FRKGVKE 276 (295)
Q Consensus 270 ~~~~~~~ 276 (295)
+++++.+
T Consensus 228 ~~~~~~~ 234 (359)
T 1svv_A 228 LNDALKP 234 (359)
T ss_dssp CSGGGCT
T ss_pred EcccHHH
Confidence 9887644
No 47
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=4.3e-21 Score=175.51 Aligned_cols=233 Identities=10% Similarity=0.077 Sum_probs=164.0
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
++++..+++..+..+.+. ....+.|+|..+++. +++.+.+++.+.+.+. ..+ |+...+..++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQ------YPPGPGSAPLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHH
Confidence 455667777777777764 334467899877763 5789999999988652 112 333344578888888888
Q ss_pred HHHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 102 LEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 102 a~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
.+.+|++ ++. +|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++++.+..
T Consensus 76 ~~~~g~~~~~~~---~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~~~~~~~ 144 (411)
T 2o0r_A 76 RRHFGVDYDPET---EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHRVTVPLVPDGR 144 (411)
T ss_dssp HHHHCCCCCTTT---SEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETT
T ss_pred HHHcCCCCCCCc---eEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEeecccccc
Confidence 8888853 421 588999988 8887888899999999999988877643 2334565555454321101
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccC----CCCCC-CCc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP-FEY 248 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~-~~~ 248 (295)
++.+|++++++++++ ++++|+++.++| |...+ +++|.++|++||+++|+|++|+.+..... +.... ..+
T Consensus 145 ~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 223 (411)
T 2o0r_A 145 GFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAE 223 (411)
T ss_dssp EEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred CCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCC
Confidence 356999999999976 899999875555 34444 68999999999999999999986543221 11111 124
Q ss_pred ceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 249 ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 249 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
.|+++.|+||+|+.| +.|++++++++.+
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 253 (411)
T 2o0r_A 224 RTITISSAAKMFNCTGWKIGWACGPAELIA 253 (411)
T ss_dssp GEEEEEEHHHHTTCTTTCEEEEECCHHHHH
T ss_pred CEEEEeechhhcCCccceEEEEeeCHHHHH
Confidence 799999999988533 3599999877654
No 48
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.86 E-value=5e-21 Score=175.93 Aligned_cols=250 Identities=14% Similarity=0.096 Sum_probs=165.4
Q ss_pred CCCCCccchhhhcccCCCcchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCC
Q 022564 1 MSSLPNEAVYEKEKNGVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGY 78 (295)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~ 78 (295)
|+++.|..--++ -.+++++..+++.++..+.+.. ...+.|+|..+.+. +++.+.+++.+.+....
T Consensus 1 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---- 67 (429)
T 1yiz_A 1 MSSTSNETMHNK--------FDLPKRYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPD---- 67 (429)
T ss_dssp -----------C--------CCSSSSCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSC----
T ss_pred CCCCccchhccc--------cchhHHhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccc----
Confidence 666666544221 1134566677777777776643 34578899887663 57899999998875410
Q ss_pred CCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccc
Q 022564 79 PGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQ 155 (295)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~ 155 (295)
.....|+...+..++++++.+++.+.+|. +++. +|++++|++ ++..++.+++++||+|+++.+.|.++..
T Consensus 68 ~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~---- 140 (429)
T 1yiz_A 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMT---EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP---- 140 (429)
T ss_dssp GGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTT---SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----
T ss_pred cCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcC---CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----
Confidence 01112333345578888888888887785 4431 588999988 8887889999999999999977776543
Q ss_pred ccccccccceeeeEEEeeecCCC---------CCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc---CHHHHHHHHHH
Q 022564 156 TDTKKISAVSIFFETMPYRLNES---------TGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY---DYERIRKVCNK 221 (295)
Q Consensus 156 ~~~~~~~~~g~~~~~v~~~~~~~---------~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~---~l~~I~~ia~~ 221 (295)
.+...|..+..++ .+.+ ++.+|++++++++++ ++++|+++.++| |... ++++|.++|++
T Consensus 141 ----~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (429)
T 1yiz_A 141 ----MVKAAGGIPRFIP--LKPNKTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKK 213 (429)
T ss_dssp ----HHHHTTCEEEEEE--CBCCCSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred ----HHHHcCCEEEEEe--CCcccccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence 2334565554454 4433 467999999999976 889999875555 3444 48999999999
Q ss_pred cCCEEEEEccccccccccC----CCCCC-CCcceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 222 QKAIMLADMAHISGLVAAG----VIPSP-FEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 222 ~~~~vivD~a~~~g~~~~~----~~~~~-~~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
||+++|+|++|+....... +...+ ..+.|+++.|+||+|+.| +.|++++++++.+.
T Consensus 214 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 276 (429)
T 1yiz_A 214 WNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKN 276 (429)
T ss_dssp HTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHH
T ss_pred cCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHH
Confidence 9999999999875432211 11111 124899999999988533 24999998876543
No 49
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.86 E-value=9.2e-21 Score=178.42 Aligned_cols=177 Identities=18% Similarity=0.132 Sum_probs=134.9
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--------------CCCeEEEecCCCCc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK--------------PHDRIMALDLPHGG 148 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~--------------~gd~Vl~~~~~~~~ 148 (295)
|...+...++|+.+.+|+++++|.+.+. ..+++++|++ ++..++.++.. +++.|+++...|.+
T Consensus 127 ~~~~p~~~~le~~~~~~l~~~~g~~~~~--~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s 204 (511)
T 3vp6_A 127 YEIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 204 (511)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCC--CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence 4455778899999999999999997421 1688888888 77766666543 57889999988877
Q ss_pred ccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHhhcC-----CcEEEEc-CCCC-CCccCHHHHHHH
Q 022564 149 HLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASAY-ARLYDYERIRKV 218 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~~~~-----tk~i~l~-~~n~-~~~~~l~~I~~i 218 (295)
+... +...|. .+..++ .+ +++.+|+++|++++++.+ |++|+++ .+|+ |.+.|+++|+++
T Consensus 205 ~~~~--------~~~~g~g~~~~~~v~--~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~i 273 (511)
T 3vp6_A 205 IKKA--------GAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADI 273 (511)
T ss_dssp HHHH--------HHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHH
T ss_pred HHHH--------HHHcCCCCCcEEEee--cC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHH
Confidence 6543 334444 454454 55 568999999999997621 7888887 4433 688999999999
Q ss_pred HHHcCCEEEEEccccccccccCCCCC---CCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 219 CNKQKAIMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 219 a~~~~~~vivD~a~~~g~~~~~~~~~---~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
|++||+|+++|++|+.+.+....... ++.++|++++++||||++|.| |+++++++
T Consensus 274 a~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 274 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred HHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 99999999999999988875432221 223589999999999999988 99999876
No 50
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.86 E-value=3.9e-21 Score=173.91 Aligned_cols=225 Identities=15% Similarity=0.142 Sum_probs=157.5
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
+++++.++++.+..+.+.. ...+.|+|..+++. +++.+.+++.+.+.+ . .. |+......+++ +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~------y~~~~~~~~l~----~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLA-QRLGAVNLGQGFPSNPPPPFLLEAVRRALGR-Q-DQ------YAPPAGLPALR----EAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHH-HHHTCEECCCCSCSSCCCHHHHHHHHHHTTT-S-CS------CCCTTCCHHHH----HHH
T ss_pred hhhhhhcCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHH-h-cC------CCCCCCCHHHH----HHH
Confidence 4556666777777666643 33567899888763 578999999888754 1 12 22222334444 777
Q ss_pred HHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC--CC
Q 022564 102 LEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN--ES 178 (295)
Q Consensus 102 a~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~ 178 (295)
+++++++++ +|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .+ ++
T Consensus 71 a~~~~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~ 136 (381)
T 1v2d_A 71 AEEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVR--LDLTPE 136 (381)
T ss_dssp HHHHTSCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CEEETT
T ss_pred HHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--CCCCCc
Confidence 788898876 799999998 8887888889999999999988877643 2334565554454 43 23
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccc---cCCCCCCCCcce
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA---AGVIPSPFEYAD 250 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~---~~~~~~~~~~~D 250 (295)
++.+|++++++++++ ++++|+++.++| |... ++++|.++|++||+++|+|++|+.+... ...... ..+.|
T Consensus 137 ~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~~~ 214 (381)
T 1v2d_A 137 GFRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERT 214 (381)
T ss_dssp EEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTE
T ss_pred cCCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCCCE
Confidence 578999999999976 889999875555 3444 4889999999999999999998765431 111100 12489
Q ss_pred EEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 251 VVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 251 ~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
++++|+||+++.| +.|++++++++.+.
T Consensus 215 ~~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 243 (381)
T 1v2d_A 215 FTVGSAGKRLEATGYRVGWIVGPKEFMPR 243 (381)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCTTTHHH
T ss_pred EEEeechhhcCCcccceEEEEeCHHHHHH
Confidence 9999999988533 35999998886553
No 51
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.86 E-value=1.4e-20 Score=176.76 Aligned_cols=199 Identities=10% Similarity=0.014 Sum_probs=145.4
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEeCCChH-HHHHHHHhh
Q 022564 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 56 ~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
..+++.+.+++.+.+...+ .+ +...+...++++.+++++++++|++ ++.. ..-.+++|++ ++..++.++
T Consensus 66 ~~~~~~v~~~l~~~~~~~~--~~-----~~~~p~~~~le~~~~~~la~l~g~~~~~~~~-~~g~~t~ggtea~~~a~~a~ 137 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNAPLEEAET-AVGVGTVGSSEAIMLAGLAF 137 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCCCSSCC-CEEEEESSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC--CC-----hhcChhHHHHHHHHHHHHHHHhCCCcccccC-CcceecCcHHHHHHHHHHHH
Confidence 3468999999998876533 11 1233557889999999999999997 4421 1223467777 777677777
Q ss_pred cCC--------CC-----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 133 LKP--------HD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 133 ~~~--------gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
..+ |+ +|+++.+.|.++.. .+...|.++..++ ++++++.+|++++++++++ +|++|
T Consensus 138 ~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v 206 (502)
T 3hbx_A 138 KRKWQNKRKAEGKPVDKPNIVTGANVQVCWEK--------FARYFEVELKEVK--LSEGYYVMDPQQAVDMVDE-NTICV 206 (502)
T ss_dssp HHHHHHHHHHTTCCCSCCEEEEETTCCHHHHH--------HHHHTTCEEEEEC--CBTTBCSCCHHHHHHHCCT-TEEEE
T ss_pred HHHHhHHHHhcCCCCCCcEEEEcCCchHHHHH--------HHHHcCceeEEEe--cCCCcCcCCHHHHHHHHhh-CCEEE
Confidence 554 76 89999977666533 3446676665555 5544589999999999987 88888
Q ss_pred EEcCCCC--CCccCHHHHHHHHHHc------CCEEEEEccccccccc--cCCCCC--CCCcceEEEeCCCCCCCCCce-E
Q 022564 200 VAGASAY--ARLYDYERIRKVCNKQ------KAIMLADMAHISGLVA--AGVIPS--PFEYADVVTTTTHKSLRGPRG-A 266 (295)
Q Consensus 200 ~l~~~n~--~~~~~l~~I~~ia~~~------~~~vivD~a~~~g~~~--~~~~~~--~~~~~D~~~~s~~K~l~gp~g-G 266 (295)
+++.+++ |...|+++|.++|+++ |+++++|+||+.+..+ .+.... ...++|++++++|||+.+|.| |
T Consensus 207 ~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G 286 (502)
T 3hbx_A 207 AAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIG 286 (502)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCE
T ss_pred EEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeE
Confidence 8874443 5889999999999999 9999999999865432 111111 123699999999999999988 9
Q ss_pred EEEEeCC
Q 022564 267 MIFFRKG 273 (295)
Q Consensus 267 ~l~~~~~ 273 (295)
+++++++
T Consensus 287 ~~~~~~~ 293 (502)
T 3hbx_A 287 WVIWRNK 293 (502)
T ss_dssp EEEESSG
T ss_pred EEEEeCH
Confidence 8888764
No 52
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.86 E-value=3.2e-21 Score=176.46 Aligned_cols=201 Identities=14% Similarity=0.131 Sum_probs=136.8
Q ss_pred HHHHHHHhhhhhc-cCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEE---eCCChHHHHHHHHhhcCC
Q 022564 60 VSVMQAVGSVMTN-KYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQ---SLSGSPSNFQVYTALLKP 135 (295)
Q Consensus 60 ~~v~~al~~~l~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~---~~sG~~a~~~~~~al~~~ 135 (295)
.+|+++|.+.... ... +......|+. .. .+++++.+++++|.+. .++ +++|+.++..++.++++|
T Consensus 32 ~~vl~a~~~~~~~~~~~-~~~~~~~y~~-~~----~~~Le~~lA~l~g~e~-----alv~p~~~sGt~Ai~~al~all~~ 100 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHF-HPSTGYGYDD-EG----RDTLERVYATVFKTEA-----ALVRPQIISGTHAISTVLFGILRP 100 (409)
T ss_dssp HHHHHHHHHTTCCGGGG-CCCCTTCTTC-HH----HHHHHHHHHHHHTCSE-----EEEETTSCSHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHhhhhhhcc-CCCcCCCCCh-hH----HHHHHHHHHHHhCCCc-----EEEECCCccHHHHHHHHHHHhcCC
Confidence 5788888775422 111 1111111222 22 3345588999999875 455 566666888889999999
Q ss_pred CCeEEEec-CCCCcccCcccc--ccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC----CCCC-
Q 022564 136 HDRIMALD-LPHGGHLSHGYQ--TDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA----SAYA- 207 (295)
Q Consensus 136 gd~Vl~~~-~~~~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~----~n~~- 207 (295)
||+|++.. +.|++....... .....+...|.++ ..++.+ +++.+|++++++++++ +||+|+++. ++++
T Consensus 101 GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~--~~v~~~-~~g~~d~e~l~~ai~~-~tklV~i~~s~g~p~npt 176 (409)
T 3jzl_A 101 DDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGY--SSVPLL-ENGDVDFPRIAKKMTP-KTKMIGIQRSRGYADRPS 176 (409)
T ss_dssp TCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEE--EECCCC-TTSCCCHHHHHHHCCT-TEEEEEEECSCTTSSSCC
T ss_pred CCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEE--EEeCCC-CCCCcCHHHHHHhccC-CCeEEEEECCCCCCCCCc
Confidence 99999998 777765421100 0001122345444 444455 4688999999999987 899999975 6663
Q ss_pred -CccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCC---CceEEEEEeCCchhhh
Q 022564 208 -RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 208 -~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~g---p~gG~l~~~~~~~~~~ 278 (295)
...|+++|.++|++ ||+++++|++|+.+......... ++|++++|+||+++| +.||++++++++.+..
T Consensus 177 g~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l 250 (409)
T 3jzl_A 177 FTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEV---GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLC 250 (409)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGG---TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHH
T ss_pred CccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcccc---CCeEEEECccccCCccCCceEEEEEeCHHHHHHH
Confidence 78899999999999 99999999998766532221112 599999999999977 5589999998765543
No 53
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.85 E-value=2e-20 Score=168.54 Aligned_cols=201 Identities=12% Similarity=0.065 Sum_probs=147.4
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
++.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+.+|. +++ +|++++|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~~~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g 97 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-TH------YTDSRGILELREKISELYKDKYKADIIPD----NIIITGG 97 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHSSCCCCGG----GEEEESS
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cC------CCCCCCCHHHHHHHHHHHHHHhCCCCChh----hEEECCC
Confidence 357889888773 57899999988876521 12 333345678888888888887774 444 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.+++++||+|+++++.|+++.. .+...|..+ +.++ +|++++++++++ ++++|+
T Consensus 98 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~--~~v~-------~d~~~l~~~l~~-~~~~v~ 159 (370)
T 2z61_A 98 SSLGLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGAKP--VFCD-------FTVESLEEALSD-KTKAII 159 (370)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEE--EEEC-------SSHHHHHHHCCS-SEEEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEE--EEeC-------CCHHHHHHhccc-CceEEE
Confidence 98 8888888999999999999988777643 233455444 3322 689999999976 889998
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccccccc---CCCCC-CCCcceEEEeCCCCCCCCC--ceEEEEEeC
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA---GVIPS-PFEYADVVTTTTHKSLRGP--RGAMIFFRK 272 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~~~-~~~~~D~~~~s~~K~l~gp--~gG~l~~~~ 272 (295)
++.++| |...+++ |.++|++||+++|+|++|+.+.... ..... ...+.|+++.|+||+++.| +.|++++++
T Consensus 160 ~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 238 (370)
T 2z61_A 160 INSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND 238 (370)
T ss_dssp EESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred EcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH
Confidence 875555 4788899 9999999999999999998655422 11111 0124799999999998433 349999988
Q ss_pred Cchh
Q 022564 273 GVKE 276 (295)
Q Consensus 273 ~~~~ 276 (295)
++.+
T Consensus 239 ~~~~ 242 (370)
T 2z61_A 239 EIIE 242 (370)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 54
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.85 E-value=3.3e-21 Score=176.04 Aligned_cols=206 Identities=15% Similarity=0.084 Sum_probs=146.8
Q ss_pred HcCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEe
Q 022564 46 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQS 118 (295)
Q Consensus 46 ~~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~ 118 (295)
++.|+|..+++ .+++.+.+++.+.+.+.. .+ |+...+..++++++.+++.+.+|+ +++ +|++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l~~~~g~~~~~~----~v~~ 106 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELRKAIVEREKRKNGVDITPD----DVRV 106 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEE
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHhcCCCCCHH----HEEE
Confidence 36788988877 457899999988876521 11 333345578888888888877764 444 7999
Q ss_pred CCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCc
Q 022564 119 LSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 119 ~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk 197 (295)
++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++.+ +++.+|++++++++++ +++
T Consensus 107 t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~ 176 (406)
T 1xi9_A 107 TAAVTEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGKPVEYRTIEE-EDWQPDIDDIRKKITD-RTK 176 (406)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEEEEGG-GTSEECHHHHHHHCCT-TEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeecCCC-cCCcCCHHHHHHhhCc-Cce
Confidence 99988 8887888889999999999977766533 33355655555553321 3567899999999987 889
Q ss_pred EEEEcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCC-Ccc-eEEEeCCCCCCCCC--ceEE
Q 022564 198 LIVAGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPF-EYA-DVVTTTTHKSLRGP--RGAM 267 (295)
Q Consensus 198 ~i~l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~-~~~-D~~~~s~~K~l~gp--~gG~ 267 (295)
+|+++.++| |... ++++|.++|++||+++|+|++|+.+........ ..+ .+. |++++|+||+++.| +.|+
T Consensus 177 ~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (406)
T 1xi9_A 177 AIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGY 256 (406)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEE
T ss_pred EEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEE
Confidence 988875555 3444 499999999999999999999886544111100 001 236 89999999998533 3488
Q ss_pred EE--EeC
Q 022564 268 IF--FRK 272 (295)
Q Consensus 268 l~--~~~ 272 (295)
++ .++
T Consensus 257 ~~~~~~~ 263 (406)
T 1xi9_A 257 MYFVDPE 263 (406)
T ss_dssp EEEECTT
T ss_pred EEEecCc
Confidence 88 777
No 55
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.85 E-value=2.9e-20 Score=169.86 Aligned_cols=223 Identities=13% Similarity=0.118 Sum_probs=155.9
Q ss_pred cccCHHHHHHHHHHHHHHH------c-----------CceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCC-cccCC
Q 022564 28 EVVDPEIADIIEHEKARQW------K-----------GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGA-RYYGG 86 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~------~-----------~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~-~~~~~ 86 (295)
+.++++++..+.+...... . .+++..++. ..+|++.+++.+.+.+ |..++... ..++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~-~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLE-EQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHS-CCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHH-cCCCCCccccccCC
Confidence 5578899998877654421 1 233433321 2579999999998866 43232222 12222
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccccee
Q 022564 87 NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 87 ~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
..... ++++++++++|.+. .+++++|+.++..++.+++++||.|++..+.|+++.. ++...|.
T Consensus 103 ~~~~~----~l~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~ 165 (409)
T 3kki_A 103 DYDKP----MIEKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANA 165 (409)
T ss_dssp TTTSC----HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTC
T ss_pred cHHHH----HHHHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCC
Confidence 22233 35588888889875 6888888778888899999999999999987777643 2334554
Q ss_pred eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC--
Q 022564 167 FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI-- 242 (295)
Q Consensus 167 ~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-- 242 (295)
.+ ++++ .+|++++++++++.++++|+++++++ |...++++|.++|++||+++|+|++|+.|.+...-.
T Consensus 166 ~~--~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~ 237 (409)
T 3kki_A 166 QA--HPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGL 237 (409)
T ss_dssp EE--EEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH
T ss_pred eE--EEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcc
Confidence 33 4332 26899999999865689999985555 578899999999999999999999998765431100
Q ss_pred --CCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 243 --PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 243 --~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
..++ ..+|+++.|++|+++++ ||++++++++.+.
T Consensus 238 ~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~~~~ 274 (409)
T 3kki_A 238 LAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEVNRC 274 (409)
T ss_dssp HHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSGGGT
T ss_pred hhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHHHHH
Confidence 0111 13789999999999766 8999999887654
No 56
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.85 E-value=3.4e-21 Score=174.46 Aligned_cols=209 Identities=13% Similarity=0.111 Sum_probs=149.4
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.|+|..+++ .+++.+.+++.+.+.+.. .+| +.. ..++++++++++++.+| ++++ +|++++|+
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~i~~~~g~ 94 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGY------ESV--PAEYYKAVADWEEIEHRARPKED----WCVFASGV 94 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCC------BCC--CHHHHHHHHHHHHHHHSCCCCGG----GEEEESCH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCC------CCC--CHHHHHHHHHHHHHHhCCCCCHH----HEEECCCH
Confidence 5788887766 368999999999886521 122 221 46788889999999988 4554 89999998
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++.+++.+++++||+|+++.+.|.++.. .+...|.++..++++....++.+|++++++++++.++++|++
T Consensus 95 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i 166 (391)
T 3dzz_A 95 VPAISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVF 166 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEE
Confidence 8 8887889999999999999977776543 333556555445432122345699999999998448999988
Q ss_pred cCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcce--EEEeCCCCCCC--CCceEEE
Q 022564 202 GASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYAD--VVTTTTHKSLR--GPRGAMI 268 (295)
Q Consensus 202 ~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D--~~~~s~~K~l~--gp~gG~l 268 (295)
+.++|+ .. .++++|.++|++||+++|+|++|+.+...... ........| +++.|+||+++ |.+.|++
T Consensus 167 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~ 246 (391)
T 3dzz_A 167 CNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA 246 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEE
Confidence 755553 44 67899999999999999999998754433211 111101145 99999999873 4455999
Q ss_pred EEe-CCchh
Q 022564 269 FFR-KGVKE 276 (295)
Q Consensus 269 ~~~-~~~~~ 276 (295)
+++ +++.+
T Consensus 247 ~~~~~~~~~ 255 (391)
T 3dzz_A 247 IIPNPDLRA 255 (391)
T ss_dssp ECCSHHHHH
T ss_pred EECCHHHHH
Confidence 997 55544
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.85 E-value=1e-20 Score=171.42 Aligned_cols=231 Identities=10% Similarity=0.132 Sum_probs=163.9
Q ss_pred cCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 101 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l 101 (295)
++++..+++.++..+.+.. ...+.|+|..+.+. +++.+.+++.+.+.+.. .+ |+...+..++++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l 80 (386)
T 1u08_A 9 QSKLPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQ------YAPMTGVQALREAIAQKT 80 (386)
T ss_dssp CCSCCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHH
T ss_pred chhhhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhhc-cC------CCCCCCCHHHHHHHHHHH
Confidence 4566777777777776643 33567899887763 57899999998876411 12 333344578888888888
Q ss_pred HHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCC
Q 022564 102 LEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES 178 (295)
Q Consensus 102 a~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 178 (295)
++.+|. +++. +|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .+.+
T Consensus 81 ~~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~ 147 (386)
T 1u08_A 81 ERLYGYQPDADS---DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRMA--LQPP 147 (386)
T ss_dssp HHHHSCCCCTTT---TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCTT
T ss_pred HHHhCCCCCCCC---CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--cCcc
Confidence 888885 3421 589999988 8887888899999999999988776543 2334565554444 5534
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccccCCC-C-CCC---Cc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-P-SPF---EY 248 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~-~~~---~~ 248 (295)
++.+|++++++++++ ++++|+++.++| |... ++++|.++|++||+++|+|++|+......... + ..+ .+
T Consensus 148 ~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 226 (386)
T 1u08_A 148 HFRVDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE 226 (386)
T ss_dssp TCCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT
T ss_pred cCcCCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccC
Confidence 578999999999976 889999975555 3444 47899999999999999999987643321110 1 011 14
Q ss_pred ceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 249 ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 249 ~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
.|+++.|+||+|+.| +.|++++++++.+
T Consensus 227 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 256 (386)
T 1u08_A 227 RAVAVSSFGKTYHMTGWKVGYCVAPAPISA 256 (386)
T ss_dssp TEEEEEEHHHHTTCGGGCCEEEECCHHHHH
T ss_pred cEEEEecchhhcCCcccceEEEEcCHHHHH
Confidence 789999999988533 3499999877654
No 58
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.85 E-value=7.8e-21 Score=173.86 Aligned_cols=233 Identities=15% Similarity=0.162 Sum_probs=150.8
Q ss_pred ccCcccccCHHHHHHHHHHHHH----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKAR----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
+++++..++++.+..+...... .++.|+|..+++. +++.+.+++.+.+.+....+ |+...+..+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ 83 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG------YSTSRGIPRLRRA 83 (412)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHH
Confidence 3455556666656555443321 1256899888764 57899999988775421111 3333455778877
Q ss_pred HHHHHHHHcCC--CC-CCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 97 CQKRALEAFRL--DP-EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 97 ~~~~la~~~g~--~~-~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
+.+++.+.+|+ ++ + +|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++
T Consensus 84 ia~~~~~~~g~~~~~~~----~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~ 151 (412)
T 2x5d_A 84 ISHWYRDRYDVQIDPES----EAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGAQVRSVP 151 (412)
T ss_dssp HHHHHHHHHCCCCCTTT----SEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTCEEEEEE
T ss_pred HHHHHHHHhCCCCCCCc----CEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee
Confidence 77888777785 44 4 799999998 8888888999999999999977776543 2334565554444
Q ss_pred eecCCC-CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccC----CC
Q 022564 173 YRLNES-TGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VI 242 (295)
Q Consensus 173 ~~~~~~-~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~ 242 (295)
.+.+ ++.+|++++++++++ ++++|+++.++|| ... ++++|.++|++||+++|+|++|+.+..... +.
T Consensus 152 --~~~~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 228 (412)
T 2x5d_A 152 --LVPGIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIM 228 (412)
T ss_dssp --CSTTSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred --cCCccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChh
Confidence 5433 345899999999876 8999999755553 444 478999999999999999999987654221 11
Q ss_pred CCC-CCcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 243 PSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 243 ~~~-~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
... ..+.|+++.|+||+|+ |.+.|++++++++.+
T Consensus 229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 265 (412)
T 2x5d_A 229 QVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVS 265 (412)
T ss_dssp GSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHH
T ss_pred hccCccCcEEEEecCccccCCcccceEEEEcCHHHHH
Confidence 110 0247899999999985 334599999877654
No 59
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.85 E-value=1.2e-20 Score=169.51 Aligned_cols=226 Identities=14% Similarity=0.060 Sum_probs=154.3
Q ss_pred ccCcccccCHHHHHHHHHHHHHH---HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~---~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
+++.++.+.++.......+.... .+.|+|..++++ +++.+++++.+.+.... +|+. ....+ +
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~----l 72 (363)
T 3ffh_A 6 WKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETE--IYPD-------GWASS----L 72 (363)
T ss_dssp CCGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC-----------CHH----H
T ss_pred hhHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCCC-------cchHH----H
Confidence 34555666666554433333322 357999988875 58999999988765421 2221 12233 5
Q ss_pred HHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
++.+++++|++++ +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+
T Consensus 73 r~~la~~~~~~~~----~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~ 138 (363)
T 3ffh_A 73 RKEVADFYQLEEE----ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ--------NALIEGAEVREIP--LL 138 (363)
T ss_dssp HHHHHHHHTCCGG----GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHH--------HHHHHTCEEEEEE--CC
T ss_pred HHHHHHHhCCChh----hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CC
Confidence 5888888998876 899999999 8887888999999999999976655432 3345565554454 55
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHc--CCEEEEEccccccccccCCC----CCCCCc
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVI----PSPFEY 248 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~----~~~~~~ 248 (295)
+++.+|++++++++++ ++++|+++.++| |...|+++|.++++.+ |+++|+|++|+.... .... ......
T Consensus 139 -~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 139 -QDGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT-PQPEKHEKLVRTYK 215 (363)
T ss_dssp -TTSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS-SCCCCCGGGGGTCT
T ss_pred -CCCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC-ccccCHHHHhhcCC
Confidence 3688999999999987 899999985555 4788999999999888 999999999984433 1110 000012
Q ss_pred ceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 249 ADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 249 ~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
.++++.|++|+++ |.+.|++++++++.+..
T Consensus 216 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l 247 (363)
T 3ffh_A 216 NLIITRTFSKIYGLASARVGYGIADKEIIRQL 247 (363)
T ss_dssp TEEEEEESSSTTCCSSCCCEEEEECHHHHHHH
T ss_pred CEEEEeechhhhcCchhceeeeecCHHHHHHH
Confidence 5588999999884 33339999988765543
No 60
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.85 E-value=5.6e-21 Score=173.29 Aligned_cols=196 Identities=9% Similarity=0.069 Sum_probs=136.3
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHH-HHHcCCCCCCcceeEEeCCChHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LEAFRLDPEKWGVNVQSLSGSPSNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~l-a~~~g~~~~~~~~~v~~~sG~~a~~~ 127 (295)
|.+..++-.+++++++++.+.+.+.+. ....+...+ +++.+ ++++|.... .+++++|+.++..
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~--------~~~~~~~~~----l~~~~~a~~~g~~~~----~v~~~sgt~al~~ 68 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIY--------TNYGPINQR----FEQTIMSGFFQNRGA----VTTVANATLGLMA 68 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCC--------SSSCHHHHH----HHHHHHHHTSTTCSE----EEEESCHHHHHHH
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCc--------ccCCHHHHH----HHHHHHHHHhCCCCe----EEEeCCHHHHHHH
Confidence 555444445678889999998876331 111233344 44788 999993221 4556566558777
Q ss_pred HHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHH-hhcC--CcEEEEcC
Q 022564 128 VYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA-TLFR--PKLIVAGA 203 (295)
Q Consensus 128 ~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i-~~~~--tk~i~l~~ 203 (295)
++.++ +++||+|+++.+.|.++... +...|.++..+ +++++++.+|++++++++ ++ + ||+|+.++
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~~~~--------~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~~-~~~tk~v~~~~ 137 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPATPLA--------AIWCGLEPYFI--DISIDDWYMDKTVLWDKIEEL-KEEVAIVVPYA 137 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHHHHHHHH-GGGEEEECCBC
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--ecCCccCCcCHHHHHHHHhcC-CCCceEEEEEC
Confidence 88888 89999999999888876543 23556555444 466567899999999998 44 6 88887542
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC-CCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
+ +|...|+++|.++|+ ||++||+|++|+.|....+... ..+..++++++++||+++++.||+++++++
T Consensus 138 ~-~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~ 206 (377)
T 3ju7_A 138 T-FGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE 206 (377)
T ss_dssp G-GGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred C-CCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH
Confidence 2 367889999999999 9999999999998876533221 111224455666789998877788888764
No 61
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.85 E-value=3.9e-21 Score=172.04 Aligned_cols=202 Identities=10% Similarity=-0.005 Sum_probs=146.1
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
+.+++.++...+++++++++.+.+.+... ++. + ......++.+.+++++++++|.+..+ +|++++|++ ++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~----~-~~~~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VIS----H-RSKKFEEVYKTASDNLKTLLELPSNY---EVLFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSC----T-TSHHHHHHHHHHHHHHHHHTTCCTTE---EEEEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcC----C-CCHHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCchHHH
Confidence 45788888888899999888887765221 111 1 12334466777889999999985322 788999888 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
.+++.+++++ .+++....+.++ .. ...+...|.++..++ .+ .++.+|+++++ +++ +|++|+++.++
T Consensus 75 ~~~~~~l~~~--~~i~~~~~~~~~--~~----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~--~~~-~~~~v~~~~~~ 140 (362)
T 3ffr_A 75 ERIIQNCVEK--KSFHCVNGSFSK--RF----YEFAGELGREAYKEE--AA-FGKGFYPADIT--VPA-DAEIICLTHNE 140 (362)
T ss_dssp HHHHHHHCSS--EEEEEECSHHHH--HH----HHHHHHTTCEEEEEE--CC-TTCCCCGGGCC--CCT-TCCEEEEESEE
T ss_pred HHHHHhccCC--cEEEEcCcHHHH--HH----HHHHHHhCCCeEEEe--cC-CCCCCCHHHHh--ccC-CccEEEEEcCC
Confidence 8888999888 555444333331 11 112234465555554 44 45789999998 555 89999998555
Q ss_pred C--CCccCHHHHHHHHHHc-CCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 206 Y--ARLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 206 ~--~~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
| |...|+++|.++|++| |+++|+|++|+.+..+.+.. .+|++++|+||+|+||.| |++++++++.+
T Consensus 141 nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~-----~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~ 210 (362)
T 3ffr_A 141 TSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWT-----KIDSVFFSVQKCFGLPAGLGVWILNDRVIE 210 (362)
T ss_dssp TTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTT-----SCSEEEEETTSTTCCCSCCEEEEEEHHHHH
T ss_pred CCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChh-----HCcEEEEecccccCCCCceEEEEECHHHHH
Confidence 5 4788999999999999 99999999998876554332 289999999999998888 99999987644
No 62
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.85 E-value=5.8e-21 Score=172.47 Aligned_cols=226 Identities=13% Similarity=0.131 Sum_probs=156.4
Q ss_pred cCH-HHHHHHHHHHHHH----HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHH
Q 022564 30 VDP-EIADIIEHEKARQ----WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 102 (295)
Q Consensus 30 ~~~-~~~~~~~~~~~~~----~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la 102 (295)
+++ +.+..+.+..... ++.|+|..+++. +++.+.+++.+.+.+... ..|+......++++++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~ 77 (376)
T 2dou_A 4 VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYE 77 (376)
T ss_dssp CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHH
Confidence 444 5666555543332 357899888774 578999999888754111 113333456778877878887
Q ss_pred HHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCC
Q 022564 103 EAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNEST 179 (295)
Q Consensus 103 ~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 179 (295)
+.+|++ ++. +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ . .++
T Consensus 78 ~~~g~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~-~~~ 143 (376)
T 2dou_A 78 GRYGVGLDPRR---EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASLRTFLIP--L-RED 143 (376)
T ss_dssp HHHSCCCCTTT---SEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTCEEEEEC--B-CTT
T ss_pred HHhCCCCCCCc---cEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCCEEEEee--C-CCC
Confidence 777875 221 689999988 8877889999999999999977666533 3334565554454 4 255
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCC---Ccce
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF---EYAD 250 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~---~~~D 250 (295)
+.+|++++++++++ ++++|+++.++|| ...+ +++|.++|++||+++|+|++|+.+...... ....+ .+.+
T Consensus 144 ~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 144 GLADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp SSBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTE
T ss_pred CCCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcE
Confidence 67899999999976 7899999855553 4444 778999999999999999999865432110 00111 1367
Q ss_pred EEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 251 VVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 251 ~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
+++.|++|+|+ |.+.|++++++++.+
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 250 (376)
T 2dou_A 223 VELFSLSKSYNLAGFRLGFALGSEEALA 250 (376)
T ss_dssp EEEEEHHHHHTCGGGCCEEEEECHHHHH
T ss_pred EEEecchhhcCChhheeEEEecCHHHHH
Confidence 89999999884 334599999887654
No 63
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.85 E-value=2e-20 Score=170.31 Aligned_cols=211 Identities=10% Similarity=0.038 Sum_probs=150.7
Q ss_pred CceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEeCCCh
Q 022564 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGS 122 (295)
Q Consensus 48 ~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~~sG~ 122 (295)
.|+|..+.. ++++.+++++.+.+.+....+ |+...+..++++++++++++++|.+ +++ +|++++|+
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~---~i~~~~g~ 111 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQA------YTEYRGDLGIRDLLAPRLAAFTGAPVDARD---GLIITPGT 111 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHH------SCCTTCCHHHHHHHHHHHHHHHTSCCCTTT---SEEEESHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCC------cCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCCc
Confidence 588876543 368899999998876421101 2333445778888899999999984 211 79999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec---CCCCCCCCHHHHHHHHhhcCCcE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---NESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
+ ++..++.+++++||+|++..+.|.++.. .+...|.++..+++.. +.+++.+|++++++++++ ++++
T Consensus 112 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~ 182 (407)
T 3nra_A 112 QGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARV 182 (407)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcE
Confidence 8 8887888999999999999977776543 3345565555554321 025678999999999987 8999
Q ss_pred EEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCC----CC--CCCcceEEEeCCCCCCC--CCce
Q 022564 199 IVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PS--PFEYADVVTTTTHKSLR--GPRG 265 (295)
Q Consensus 199 i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~--~~~~~D~~~~s~~K~l~--gp~g 265 (295)
|+++.++| |...+ +++|+++|++||+++|+|++|+.+....... .. ...+.++++.|++|+++ |.+.
T Consensus 183 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 262 (407)
T 3nra_A 183 FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRL 262 (407)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCC
T ss_pred EEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeE
Confidence 98875555 35666 8999999999999999999998654332111 11 11236799999999985 3334
Q ss_pred EEEEEeCCchh
Q 022564 266 AMIFFRKGVKE 276 (295)
Q Consensus 266 G~l~~~~~~~~ 276 (295)
|++++++++.+
T Consensus 263 G~~~~~~~~~~ 273 (407)
T 3nra_A 263 GVAFGSRAIIA 273 (407)
T ss_dssp EEEEECHHHHH
T ss_pred EEEEcCHHHHH
Confidence 99999877654
No 64
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.84 E-value=4.3e-21 Score=172.55 Aligned_cols=203 Identities=11% Similarity=0.014 Sum_probs=146.6
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
++.|+|..++++ +++.+++++.+.+.... +|+.. .. .+ +++.+++++|++++ +|++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~----lr~~la~~~~~~~~----~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPDD------SM-IE----LKSTLAQKYKVQNE----NIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCCT------TC-HH----HHHHHHHHHTCCGG----GEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC------Ch-HH----HHHHHHHHhCCCcc----eEEECCCHH
Confidence 467999988875 68999999998876422 33322 22 33 45788888898776 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||+|+++.+.|.++.. .+...|.++..++ ++.+++ +|++++++++++ ++++|+++
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~-~d~~~l~~~l~~-~~~~v~~~ 160 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGAKCYKTQ--SITHNL-DEFKKLYETHKD-EIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTCEEEECS--SSSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEEe--cCCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence 8887888999999999999977665533 3335565554444 423567 999999999986 89999997
Q ss_pred CCCC--CCccCHHHHHHHHH--HcCCEEEEEcccccccc--ccCCCCCCC-----CcceEEEeCCCCCCC--CCceEEEE
Q 022564 203 ASAY--ARLYDYERIRKVCN--KQKAIMLADMAHISGLV--AAGVIPSPF-----EYADVVTTTTHKSLR--GPRGAMIF 269 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~--~~~~~vivD~a~~~g~~--~~~~~~~~~-----~~~D~~~~s~~K~l~--gp~gG~l~ 269 (295)
.++| |...++++|.++++ ++|+++|+|++|+.+.. ........+ .+.++++.|+||+++ |.+.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 5555 47888888888888 77999999999885442 211111000 126799999999974 33459999
Q ss_pred EeCCchhh
Q 022564 270 FRKGVKEI 277 (295)
Q Consensus 270 ~~~~~~~~ 277 (295)
+++++.+.
T Consensus 241 ~~~~~~~~ 248 (365)
T 3get_A 241 ANANIISA 248 (365)
T ss_dssp ECHHHHHH
T ss_pred cCHHHHHH
Confidence 98776543
No 65
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.84 E-value=1.7e-21 Score=178.01 Aligned_cols=236 Identities=12% Similarity=0.041 Sum_probs=156.9
Q ss_pred chhccCcccccCHHHHHHHHHHHHHH--HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHH
Q 022564 20 PKQLNAPLEVVDPEIADIIEHEKARQ--WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (295)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~ 95 (295)
++++++++..++++.+..+.+..... ++.|+|..+++. +++.+.+++.+.+.+....+ |+......++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~ 92 (404)
T 2o1b_A 19 SHMISNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQK------YGAFHGKEAFKQ 92 (404)
T ss_dssp ---CCHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHS------CCCTTCCHHHHH
T ss_pred chhhhhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHH
Confidence 33335555666665555544432211 246889888774 57899999988774310011 222234577888
Q ss_pred HHHHHHHHHcCCC--C-CCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 96 LCQKRALEAFRLD--P-EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 96 ~~~~~la~~~g~~--~-~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
++.+++++.+|++ + + +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..+
T Consensus 93 ~ia~~~~~~~g~~~~~~~----~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v 160 (404)
T 2o1b_A 93 AIVDFYQRQYNVTLDKED----EVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADGKPVPL 160 (404)
T ss_dssp HHHHHHHHHHCCCCCTTT----SEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCCCCcc----cEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEe
Confidence 8888888877975 2 3 799999998 8887889999999999999977776643 233456555444
Q ss_pred eeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccccCC-CCCC
Q 022564 172 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP 245 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~ 245 (295)
+ .+.+++.+|++++++++++ ++++|+++.++| |... ++++|.++|++||+++|+|++|+.+...... ....
T Consensus 161 ~--~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~ 237 (404)
T 2o1b_A 161 N--LEPPHYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILA 237 (404)
T ss_dssp E--CCTTTCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGG
T ss_pred c--cCcccCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhh
Confidence 4 5433557899999999976 789999985555 3444 4789999999999999999999865432110 0011
Q ss_pred CC---cceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 246 FE---YADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 246 ~~---~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
+. +.|+++.|++|+|+ |.+.|++++++++.+
T Consensus 238 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 273 (404)
T 2o1b_A 238 SENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQ 273 (404)
T ss_dssp STTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred cCCCCCCEEEEEecchhccCchhheEeEecCHHHHH
Confidence 11 36799999999985 334499999887654
No 66
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.84 E-value=5.8e-20 Score=169.08 Aligned_cols=205 Identities=16% Similarity=0.144 Sum_probs=146.7
Q ss_pred CceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 48 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
.|+|..+++ .+++.+.+++.+.+.. +..++++.+. ++.. ....++++.+++++|.+. .+++++|+.
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~----~~~~~l~~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTF----HDHMEVEQALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCC----HHHHHHHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCc----HHHHHHHHHHHHHhCCCc-----eEEecCcHH
Confidence 457777764 2679999999988865 2223332211 2222 334446688888888763 788999988
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc---CCcEEE
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLIV 200 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~---~tk~i~ 200 (295)
++..++.+++++||.|++..+.|+++.. ++...|.++ ++++ .+|++++++++++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~~~--~~~~------~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNAEI--VRFR------HNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCSEE--EEEC------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCee--EEeC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 8887888899999999999988877643 333455444 3333 25899999999753 688888
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC----CCC-CcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~----~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
++++++ |...|+++|.++|++||+++|+|++|+.+........ .++ .++|++++|+||+|+ +.||+++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~ 278 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHP 278 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCT
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHH
Confidence 874444 5788999999999999999999999998766411000 111 147999999999985 77899999988
Q ss_pred chhhhc
Q 022564 274 VKEINK 279 (295)
Q Consensus 274 ~~~~~~ 279 (295)
+.+...
T Consensus 279 l~~~l~ 284 (427)
T 2w8t_A 279 KFEAVR 284 (427)
T ss_dssp TGGGGG
T ss_pred HHHHHH
Confidence 766443
No 67
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.84 E-value=5.8e-21 Score=173.45 Aligned_cols=197 Identities=14% Similarity=0.116 Sum_probs=140.2
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccC-CcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~-~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~ 125 (295)
+.++|..+.+..++++.+++.+.+...+ |. ......+ +++.+++++|.+. .+++++|+.++
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~---------~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~gt~al 84 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTW---------ISSVGRFIVE----FEKAFADYCGVKH-----AIACNNGTTAL 84 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTC---------CSSCSHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCC---------ccCCChHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHH
Confidence 5677888888888999999998876532 11 2233444 5588888888763 56666665588
Q ss_pred HHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 126 ~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
..++.++ +++||+|+++.+.|.++.... ...|.++. .++++++++.+|++++++++++ ++++|++++
T Consensus 85 ~~~l~~~~~~~gd~vl~~~~~~~~~~~~~--------~~~g~~~~--~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n- 152 (391)
T 3dr4_A 85 HLALVAMGIGPGDEVIVPSLTYIASANSV--------TYCGATPV--LVDNDPRTFNLDAAKLEALITP-RTKAIMPVH- 152 (391)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTHHHHHH--------HHTTCEEE--EECBCTTTCSBCGGGSGGGCCT-TEEEECCBC-
T ss_pred HHHHHHcCCCCcCEEEECCCchHHHHHHH--------HHCCCEEE--EEecCccccCcCHHHHHHhcCC-CceEEEEEC-
Confidence 8788898 999999999998888775432 34565454 4446656789999999999976 888887542
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
..|...++++|.++|++||+++|+|++|+.|....+.....+..+++.++|.||+++++.||+++++++
T Consensus 153 ~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~ 221 (391)
T 3dr4_A 153 LYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDD 221 (391)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCH
T ss_pred CCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCH
Confidence 226788999999999999999999999998877654322222124444555889998877788888765
No 68
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.84 E-value=2.1e-20 Score=169.53 Aligned_cols=186 Identities=12% Similarity=0.144 Sum_probs=137.3
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cCCCC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LKPHD 137 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~~gd 137 (295)
++++++++.+.+.... .+ |.......+ +++.+++++|.+. .|++++|+.++..++.++ +++||
T Consensus 16 ~~~~~~a~~~~l~~~~-~~------~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~gd 79 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ-WW------RMGGDEVNS----FEREFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPGT 79 (388)
T ss_dssp CHHHHHHHHHHHHTSC-CB------TTTCSHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHHHHcCC-ee------ecCCHHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcC
Confidence 4899999999886521 01 222234444 4488888999863 799999966888788998 89999
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHH
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIR 216 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~ 216 (295)
+|+++.+.|.++... +...|.++. .++++++++.+|++++++++++ ++++|+ ++|+ |...++++|.
T Consensus 80 ~Vi~~~~~~~~~~~~--------~~~~g~~~~--~v~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i~ 146 (388)
T 1b9h_A 80 EVIVPAFTFISSSQA--------AQRLGAVTV--PVDVDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDALA 146 (388)
T ss_dssp EEEEESSSCTHHHHH--------HHHTTCEEE--EECBCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHHH
T ss_pred EEEECCCccHHHHHH--------HHHcCCEEE--EEecCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHHH
Confidence 999999888887542 234565454 4446544678999999999976 788877 2333 6788999999
Q ss_pred HHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEeCC
Q 022564 217 KVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 273 (295)
Q Consensus 217 ~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~~~ 273 (295)
++|++||+++|+|++|+.|....+.....+..+++.++|.||+++|++||+++++++
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999999999998766532211111126677777889998888899999886
No 69
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=2.2e-20 Score=176.04 Aligned_cols=175 Identities=14% Similarity=0.119 Sum_probs=134.5
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc-------C-CCC------eEEEecCCCCc
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-------K-PHD------RIMALDLPHGG 148 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~-------~-~gd------~Vl~~~~~~~~ 148 (295)
|...+...++++++++++++++|++.+ ++++++|++ ++..++.++. + +|| .|+++...|++
T Consensus 140 ~~~s~~~~~le~~~~~~la~l~g~~~~----~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 140 YEIAPVFVLMEEEVLRKLRALVGWSSG----DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhchHHHHHHHHHHHHHHHHhCCCCC----CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 344466778899999999999999864 889999988 8776666652 2 576 78888888887
Q ss_pred ccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCC-CC-CCccCHHHHHHH
Q 022564 149 HLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAGAS-AY-ARLYDYERIRKV 218 (295)
Q Consensus 149 ~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~i~l~~~-n~-~~~~~l~~I~~i 218 (295)
+..... ..|. .+..++ .+ +++.+|+++|++++++. +|++|+++.+ |+ |...|+++|+++
T Consensus 216 ~~~~~~--------~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~l 284 (515)
T 2jis_A 216 IQKGAA--------FLGLGTDSVRVVK--AD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADV 284 (515)
T ss_dssp HHHHHH--------HTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred HHHHHH--------HcCCCCCcEEEEe--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHH
Confidence 754332 2333 354454 55 46899999999999752 4788888743 43 688999999999
Q ss_pred HHHcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 219 CNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 219 a~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
|++||+++|+|++|+.+....+... .++.++|++++++||||++|.| |+++++++
T Consensus 285 a~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 285 CQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred HHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 9999999999999998887654221 1222589999999999999998 99999987
No 70
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.84 E-value=1.1e-20 Score=171.65 Aligned_cols=204 Identities=21% Similarity=0.255 Sum_probs=146.1
Q ss_pred CceecCCCCC---CCHHHHHHHhhhhhccCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 48 GLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
.|++..+.+. +++.+.+++.+.+.+ +..+++..++ ++.. .....+++++++++|.+. .+++++|+.
T Consensus 45 ~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~----~~~~~l~~~la~~~~~~~-----~i~~~sGt~ 114 (399)
T 3tqx_A 45 VLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQ----TIHKELEKDISEFLGTDD-----TILYSSCFD 114 (399)
T ss_dssp EEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCB----HHHHHHHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCc----hHHHHHHHHHHHHHCCCc-----EEEECchHH
Confidence 4777777442 479999999988865 3223332222 2222 333446688888999763 899999977
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcE
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPKL 198 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~ 198 (295)
++..++.+++++||.|++..+.|+++.. .+...|.++ ++++. +|++++++.+++. ++++
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~--~~~~~------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKAQR--YRYKN------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCSEE--EEECT------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCce--eEeCC------CCHHHHHHHHHhhhccCCCceE
Confidence 8777888899999999999987777643 333556444 33332 4778888888753 7889
Q ss_pred EEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCC----CCC-CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 199 IVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 199 i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~----~~~-~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
|+++++++ |...|+++|.++|++||+++|+|++|+.|........ ..+ ...|++++|+||+|+|++||+++++
T Consensus 179 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~ 258 (399)
T 3tqx_A 179 IATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGH 258 (399)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEEC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcC
Confidence 99975555 4788899999999999999999999976654322110 111 2479999999999988999999999
Q ss_pred CCchhh
Q 022564 272 KGVKEI 277 (295)
Q Consensus 272 ~~~~~~ 277 (295)
+++.+.
T Consensus 259 ~~~~~~ 264 (399)
T 3tqx_A 259 KEIIEW 264 (399)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 886554
No 71
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.84 E-value=2e-20 Score=169.94 Aligned_cols=230 Identities=11% Similarity=0.038 Sum_probs=159.3
Q ss_pred CcccccCHHHHHHHHHHHHH-----HHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKAR-----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~-----~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
++++.+.++.+..+.+.... .++.|+|..+++. +++.+.+++.+.+.... +| +...+..++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y------~~~~g~~~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELE--KY------PLTAGLPELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SC------CCTTCCHHHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CC------CCCCCcHHHHHHH
Confidence 34455666666555543322 1357899888774 57899999998775322 22 3334457888888
Q ss_pred HHHHHHHcCCC---CCCcceeEEeCCChH-HHHHHHHhhcCCC-----CeEEEecCCCCcccCccccccccccccceeee
Q 022564 98 QKRALEAFRLD---PEKWGVNVQSLSGSP-SNFQVYTALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFF 168 (295)
Q Consensus 98 ~~~la~~~g~~---~~~~~~~v~~~sG~~-a~~~~~~al~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 168 (295)
.+++.+.+|.+ ++. +|++|+|++ ++..++.+++++| |+|+++.+.|.++.. .+...|.++
T Consensus 76 a~~l~~~~g~~~~~~~~---~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~~~ 144 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADN---EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGGEI 144 (396)
T ss_dssp HHHHHHHTTTCCCCTTT---SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTCEE
T ss_pred HHHHHHhcCCCCCCCCC---eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCCEE
Confidence 89999888854 532 689999999 8887888999997 799999976665533 334566555
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC
Q 022564 169 ETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP 243 (295)
Q Consensus 169 ~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~ 243 (295)
..++ .+.+++.+|++++++++++ ++++|+++.++|| ...+ +++|+++|++||+++|+|++|+....... .+
T Consensus 145 ~~v~--~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~ 220 (396)
T 3jtx_A 145 HFAN--CPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN-KP 220 (396)
T ss_dssp EEEE--CCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC-CC
T ss_pred EEee--cCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CC
Confidence 5555 4545668999999999987 8999999755553 5554 55699999999999999999875433221 11
Q ss_pred CC----------CCcceEEEeCCCCCCCC--CceEEEEEeCCchhh
Q 022564 244 SP----------FEYADVVTTTTHKSLRG--PRGAMIFFRKGVKEI 277 (295)
Q Consensus 244 ~~----------~~~~D~~~~s~~K~l~g--p~gG~l~~~~~~~~~ 277 (295)
.. -.+.++++.|++|.++. .+.|+++.++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 266 (396)
T 3jtx_A 221 LGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKN 266 (396)
T ss_dssp CCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHH
T ss_pred chHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHH
Confidence 11 02377999999997643 334999888776543
No 72
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.84 E-value=4e-20 Score=165.43 Aligned_cols=203 Identities=11% Similarity=0.048 Sum_probs=147.5
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..++++ +++.+++++.+.+.+.. +|+. .. ...+++.+++++|++++ +|++++|++
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~----~~~l~~~la~~~~~~~~----~i~~~~g~~~ 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN--RYAK-------NE----ILMLGNKLAAHHQVEAP----SILLTAGSSE 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCCH-------HH----HHHHHHHHHHHTTSCGG----GEEEESHHHH
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCCC-------Cc----hHHHHHHHHHHhCCChH----HEEEeCChHH
Confidence 56899888875 68999999998876522 2221 22 23466899999999876 899999998
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEc
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~ 202 (295)
++..++.+++++||+|+++.+.|.++.. .+...|.++..+ +.+ +++.+|++++++++++ .++++|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~--~~~-~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGMKVTKV--KML-DNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEE--CCC-TTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCCEEEEe--cCC-CCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 8887888999999999999977766543 333556555444 455 4689999999999983 389999998
Q ss_pred CCCC--CCccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCC-----C-cceEEEeCCCCCCC--CCceEEEEE
Q 022564 203 ASAY--ARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPF-----E-YADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~-----~-~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
.++| |...+++++.++++. ||+++|+|++|+...... .....+ . +.++++.|++|+++ |.+.|++++
T Consensus 149 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 149 NPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDP-RFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCT-TCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhcccc-ccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 5555 477888888888877 999999999987543321 111110 1 35699999999984 333499999
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 228 ~~~~~~~~ 235 (354)
T 3ly1_A 228 HPTVIALM 235 (354)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 88765543
No 73
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.84 E-value=6.9e-21 Score=174.45 Aligned_cols=238 Identities=12% Similarity=0.054 Sum_probs=165.5
Q ss_pred ccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 100 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 100 (295)
+++++..++++.+..+... ....+.|+|..+++. +++.+.+++.+.+.+.. ....|+...+..++++++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-----~~~~y~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF-----MLNQYTKTFGYPPLTKILASF 79 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHH-HHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCG-----GGGSCCCTTCCHHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHH-hhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCC-----ccCCCCCCCCCHHHHHHHHHH
Confidence 4566677777777776654 334578999888774 68999999998886521 001133334557888888899
Q ss_pred HHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec----
Q 022564 101 ALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---- 175 (295)
Q Consensus 101 la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---- 175 (295)
+.+.+|.+.+. ..+|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++.
T Consensus 80 ~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 80 FGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECBCCCCC
T ss_pred HHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCEEEEEeccccccc
Confidence 98888864321 00799999999 8887889999999999999977766543 3334565555555332
Q ss_pred C-----CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccC----C
Q 022564 176 N-----ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----V 241 (295)
Q Consensus 176 ~-----~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~ 241 (295)
+ .+++.+|++++++++++ ++++|+++.++|+ ... ++++|+++|++||+++|+|++|+....... +
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 229 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI 229 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred ccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence 0 02457899999999986 8999998855553 444 689999999999999999999875333221 1
Q ss_pred CCCC-CCcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 242 IPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 242 ~~~~-~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
...+ ..+.++++.|++|+|+ |.+.|++++++++.+
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~ 267 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 267 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEeCHHHHH
Confidence 1111 0135688999999884 334499999887544
No 74
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6.6e-21 Score=176.43 Aligned_cols=226 Identities=12% Similarity=0.144 Sum_probs=161.0
Q ss_pred cCHHHHHHHHHHHH--------HHHcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 30 VDPEIADIIEHEKA--------RQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 30 ~~~~~~~~~~~~~~--------~~~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
++++.+..+.+... ...+.|+|..|.+ .+++.+.+++.+.+.+.. ...|+...+..++++++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPM------VNQYSPTRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGG------GGSCCCTTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcC------CCCCCCCCCCHHHHHHHHH
Confidence 66777877776542 2246789988865 357899999988875411 1123333456788888888
Q ss_pred HHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 100 RALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 100 ~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
++.+.+|. +++ +|++|+|++ ++..++.+++++||+|+++.+.|+++.. .+...|..+..++ .+
T Consensus 107 ~l~~~~g~~~~~~----~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~ 172 (447)
T 3b46_A 107 LYSPIYNTELKAE----NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGKVVYVP--IN 172 (447)
T ss_dssp HHTTTTTSCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--EE
T ss_pred HHHHhcCCCCChh----hEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEe--CC
Confidence 88877775 444 799999988 8888899999999999999977776543 3335565555555 33
Q ss_pred CC-----------CCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccC
Q 022564 177 ES-----------TGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 177 ~~-----------~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (295)
++ ++.+|+++|++++++ ++++|+++.++|| .. .++++|+++|++||+++|+|++|+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~ 251 (447)
T 3b46_A 173 PPKELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS 251 (447)
T ss_dssp CCGGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC
T ss_pred CccccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC
Confidence 22 467999999999976 8999999855553 33 4689999999999999999999875433211
Q ss_pred CCC-CCC----CcceEEEeCCCCCCC--CCceEEEEE-eCCchh
Q 022564 241 VIP-SPF----EYADVVTTTTHKSLR--GPRGAMIFF-RKGVKE 276 (295)
Q Consensus 241 ~~~-~~~----~~~D~~~~s~~K~l~--gp~gG~l~~-~~~~~~ 276 (295)
... ..+ .+.|+++.|++|+|+ |.+.|++++ ++++.+
T Consensus 252 ~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~ 295 (447)
T 3b46_A 252 FTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLS 295 (447)
T ss_dssp CCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHH
T ss_pred CcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHH
Confidence 000 011 147899999999885 444699999 776544
No 75
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.84 E-value=4.1e-20 Score=166.26 Aligned_cols=205 Identities=15% Similarity=0.038 Sum_probs=144.4
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~ 123 (295)
+.|+|..++++ +++.+.+++.+.+.+....+|+. ....+ +++.+++++|+ +++ +|++|+|++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~----l~~~la~~~g~~~~~----~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEA----LRAKLKEVMQVPAGM----EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHH----HHHHHHHHHTCCTTC----EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHH----HHHHHHHHhCCCCcc----eEEEcCCHH
Confidence 56899888875 58999999998876411112222 22333 45788888898 554 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||+|++..+.|.++.. .+...|.++..++ .+ +++.+|++++++++++.++++|+++
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGLEFVGVP--LR-ADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEec--CC-CCCCCCHHHHHHHhhccCCCEEEEc
Confidence 8887888999999999999977766543 2335565554444 55 4678999999999986689999998
Q ss_pred CCCCC--Cc---cCHHHHHHHHHHc--CCEEEEEccccccccccCCC-CCCCCcceEEEeCCCCCC-CCCceEEEEEeCC
Q 022564 203 ASAYA--RL---YDYERIRKVCNKQ--KAIMLADMAHISGLVAAGVI-PSPFEYADVVTTTTHKSL-RGPRGAMIFFRKG 273 (295)
Q Consensus 203 ~~n~~--~~---~~l~~I~~ia~~~--~~~vivD~a~~~g~~~~~~~-~~~~~~~D~~~~s~~K~l-~gp~gG~l~~~~~ 273 (295)
.++|+ .. .++++|.++|++| |+++|+|++|+... ..... .....+.++++.|++|+. +|.+.|+++++++
T Consensus 165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~ 243 (367)
T 3euc_A 165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-QESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQ 243 (367)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-SCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-ccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHH
Confidence 55553 44 4677888889999 99999999987422 11110 001113668899999982 1233499999877
Q ss_pred chhhh
Q 022564 274 VKEIN 278 (295)
Q Consensus 274 ~~~~~ 278 (295)
+.+..
T Consensus 244 ~~~~~ 248 (367)
T 3euc_A 244 WLEQL 248 (367)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 76
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.84 E-value=6.1e-20 Score=167.36 Aligned_cols=233 Identities=15% Similarity=0.100 Sum_probs=157.0
Q ss_pred hccCcccccCHHHHHHHHHHHHH--HH--cCceecCCCC----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHH
Q 022564 22 QLNAPLEVVDPEIADIIEHEKAR--QW--KGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 93 (295)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~i~L~~~~~----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l 93 (295)
++++++..+++..+..+...... .. +.|+|..+.+ ++++.+.+++.+.+.+.. .... |+......++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l 80 (407)
T 2zc0_A 6 YLAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPEL 80 (407)
T ss_dssp GSCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHH
T ss_pred hhhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHH
Confidence 34555556666555554443331 23 5788876654 256889999988876521 0011 3333456788
Q ss_pred HHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEE
Q 022564 94 ESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (295)
Q Consensus 94 ~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (295)
++++.+++.+.+|. +++ +|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..
T Consensus 81 ~~~la~~~~~~~g~~~~~~----~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~ 148 (407)
T 2zc0_A 81 REELAAFLKKYDHLEVSPE----NIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL--------AFEQLGAKIEG 148 (407)
T ss_dssp HHHHHHHHHHHSCCCCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCCcc----eEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEE
Confidence 88888888777784 554 799999988 8888889999999999999977766533 33345655555
Q ss_pred EeeecCCCCCCCCHHHHHHHHh----h-cCCcEEE-EcCCCC--CCccCHH---HHHHHHHHcCCEEEEEcccccccccc
Q 022564 171 MPYRLNESTGYIDYDQLEKSAT----L-FRPKLIV-AGASAY--ARLYDYE---RIRKVCNKQKAIMLADMAHISGLVAA 239 (295)
Q Consensus 171 v~~~~~~~~~~id~e~l~~~i~----~-~~tk~i~-l~~~n~--~~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (295)
++ .+. + .+|+++++++++ + .++++|+ ++.++| |...|.+ +|.++|++||+++|+|++|+.+....
T Consensus 149 v~--~~~-~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 224 (407)
T 2zc0_A 149 VP--VDN-D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG 224 (407)
T ss_dssp EE--EET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC
T ss_pred cc--cCC-C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 54 442 3 389999999997 4 2678875 454444 4666665 99999999999999999988654422
Q ss_pred C----CCCCCCCcceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 240 G----VIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 240 ~----~~~~~~~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
. +......+.++++.|++|+++ | ++|++++++++.+
T Consensus 225 ~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~ 266 (407)
T 2zc0_A 225 GDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILK 266 (407)
T ss_dssp SSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHH
T ss_pred CCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHH
Confidence 1 111110135688999999997 4 4599999877654
No 77
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.84 E-value=2e-20 Score=170.20 Aligned_cols=205 Identities=19% Similarity=0.232 Sum_probs=144.1
Q ss_pred cCceecCCCCC---CCHHHHHHHhhhhhccCCCCCCCCccc-CCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~~~~~~-~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
..|+|..+.+. +++.+.+++.+.+.. +..++...++. +.. .....+++.+++++|++ + .|++++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~----~~~~~l~~~la~~~g~~-~----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQ----DSHKELEQKLAAFLGME-D----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCB----HHHHHHHHHHHHHHTCS-E----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCc----HHHHHHHHHHHHHhCCC-c----EEEeCChH
Confidence 45777776443 489999999988765 32222211111 112 23344668888888987 3 78999997
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCc
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF-----RPK 197 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk 197 (295)
.++..++.+++++||.|+++.+.|+++.. .+...|.++ ++++ .+|++++++++++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKR--YRYA------NNDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCSEE--EEEC------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCCce--EEEC------CCCHHHHHHHHHHhhccCCCce
Confidence 77777888889999999999988776543 233455444 3332 24899999988752 689
Q ss_pred EEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccc-cCCC-C--CCC-CcceEEEeCCCCCCCCCceEEEEE
Q 022564 198 LIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI-P--SPF-EYADVVTTTTHKSLRGPRGAMIFF 270 (295)
Q Consensus 198 ~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~-~--~~~-~~~D~~~~s~~K~l~gp~gG~l~~ 270 (295)
+|+++++++ |...++++|.++|++||+++|+|++|+.|... .+.. . ..+ .+.|+++.|+||+|+|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 998875555 47888999999999999999999999777652 1110 0 111 147999999999996667999999
Q ss_pred eCCchhh
Q 022564 271 RKGVKEI 277 (295)
Q Consensus 271 ~~~~~~~ 277 (295)
++++.+.
T Consensus 260 ~~~~~~~ 266 (401)
T 1fc4_A 260 RKEVVEW 266 (401)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 8876543
No 78
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.84 E-value=2.4e-20 Score=171.80 Aligned_cols=176 Identities=15% Similarity=0.167 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEec-CCCCcccCccccc--cccccccceeeeE
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALD-LPHGGHLSHGYQT--DTKKISAVSIFFE 169 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~-~~~~~~~~~~~~~--~~~~~~~~g~~~~ 169 (295)
.++++++++++++|.+... +++++++|+.|+..++.+++++||+|++++ +.|+++....... +...+...|.++
T Consensus 66 ~~~~l~~~la~~~g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~- 142 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY- 142 (431)
T ss_dssp HHHHHHHHHHHHTTCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE-
T ss_pred hHHHHHHHHHHHhCCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE-
Confidence 3556779999999987631 133477776688888999999999999998 7887764322100 011223456445
Q ss_pred EEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC-----CccCHHHHHHHHHH--cCCEEEEEccccccccccCC
Q 022564 170 TMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA-----RLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGV 241 (295)
Q Consensus 170 ~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~-----~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~ 241 (295)
+.++.+ +++.+|++++++++++ +|++|+++ ++||+ ...++++|.++|++ +|+++++|++|+.+......
T Consensus 143 -~~v~~~-~~~~~d~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~ 219 (431)
T 3ht4_A 143 -NAVPLT-EGGLVDFEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP 219 (431)
T ss_dssp -EECCBC-TTSSBCHHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG
T ss_pred -EEeCCC-CCCCcCHHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc
Confidence 444455 4588999999999987 89999997 45543 67789999999999 99999999998877543222
Q ss_pred CCCCCCcceEEEeCCCCCCCC---CceEEEEEeCCchhh
Q 022564 242 IPSPFEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEI 277 (295)
Q Consensus 242 ~~~~~~~~D~~~~s~~K~l~g---p~gG~l~~~~~~~~~ 277 (295)
... ++|++++|++|+|+| |.||++++++++.+.
T Consensus 220 ~~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~ 255 (431)
T 3ht4_A 220 CHV---GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEA 255 (431)
T ss_dssp GGT---TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHH
T ss_pred ccc---CCeEEEcCccccCCCCCCCceEEEEecHHHHHH
Confidence 222 489999999999876 788999999876554
No 79
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.84 E-value=3.2e-20 Score=170.15 Aligned_cols=196 Identities=14% Similarity=0.106 Sum_probs=137.6
Q ss_pred CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-cC
Q 022564 56 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL-LK 134 (295)
Q Consensus 56 ~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al-~~ 134 (295)
+++++++++++.+.+.+.....++ ...+..++.+++++.+++++|++. .+++++|+.++..++.++ ++
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~------~~~g~~~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISG------YWTGEESMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTS------BCCSSCCHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCCccccC------cccCCHHHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 345899999999988652111121 111223344556688999999873 677777766888788998 89
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHH
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYER 214 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~ 214 (295)
+||+|+++.+.|.++... +...|.++..+ +++++++.+|++++++++++ ++++|+++++ .|...++++
T Consensus 81 ~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~~~~~~ 148 (418)
T 2c81_A 81 EGDEVIVPSLTWIATATA--------VLNVNALPVFV--DVEADTYCIDPQLIKSAITD-KTKAIIPVHL-FGSMANMDE 148 (418)
T ss_dssp TTCEEEEESSSCTHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHGGGCCT-TEEEECCBCC-TTCCCCHHH
T ss_pred CcCEEEECCCccHhHHHH--------HHHcCCEEEEE--ecCCCCCCcCHHHHHHhhCC-CCeEEEEeCC-cCCcccHHH
Confidence 999999999888777543 23456555444 45544689999999999976 8898887642 367889999
Q ss_pred HHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEe-CCc
Q 022564 215 IRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR-KGV 274 (295)
Q Consensus 215 I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~-~~~ 274 (295)
|.++|++||+++|+|++|+.+....+.....+..+++.++|+||++++++||+++++ +++
T Consensus 149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l 209 (418)
T 2c81_A 149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRL 209 (418)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHH
T ss_pred HHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHH
Confidence 999999999999999999988632221111111244555555999976566999885 444
No 80
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.83 E-value=3.5e-20 Score=174.17 Aligned_cols=174 Identities=18% Similarity=0.116 Sum_probs=132.3
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcC--------CC-----C-eEEEecCCCC
Q 022564 85 GGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLK--------PH-----D-RIMALDLPHG 147 (295)
Q Consensus 85 ~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~--------~g-----d-~Vl~~~~~~~ 147 (295)
...+...++++.+++++++++|++ .+ ++++++|++ ++..++.++.. +| + .|+++...|.
T Consensus 125 ~~~~~~~~le~~~~~~la~~~g~~~~~~----~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~ 200 (504)
T 2okj_A 125 EIAPVFVLMEQITLKKMREIVGWSSKDG----DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 200 (504)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCSSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred hhChHHHHHHHHHHHHHHHHhCCCCCCC----CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchH
Confidence 334666788999999999999997 54 789999988 88777776642 56 6 7888888888
Q ss_pred cccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHhhc-----CCcEEEEcCCCC--CCccCHHHHHH
Q 022564 148 GHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLF-----RPKLIVAGASAY--ARLYDYERIRK 217 (295)
Q Consensus 148 ~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~~~-----~tk~i~l~~~n~--~~~~~l~~I~~ 217 (295)
++..... ..|. ++..++ .+ +++.+|+++|++++++. +|++|+++.+++ |...|+++|++
T Consensus 201 s~~~~~~--------~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~ 269 (504)
T 2okj_A 201 SIKKAGA--------ALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD 269 (504)
T ss_dssp HHHHHHH--------HTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHH
T ss_pred HHHHHHH--------HcCCCcccEEEEe--cC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHH
Confidence 7754332 2232 344454 54 56899999999999752 478888874433 58899999999
Q ss_pred HHHHcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 218 VCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 218 ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
+|++||+|+++|++++.+.+...... .++.++|++++++|||+++|.+ |+++++++
T Consensus 270 la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 270 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred HHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 99999999999999988876532111 1123589999999999998988 99999985
No 81
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.83 E-value=2e-20 Score=171.08 Aligned_cols=207 Identities=13% Similarity=0.047 Sum_probs=147.0
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
++.|+|..+++. +++.+.+++ +.+.+.. .+ |+...+..++++++.+++.+.+|. +++ +|++++|
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~v~~~~g 110 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VY------YSHSAGIWELREAFASYYKRRQRVDVKPE----NVLVTNG 110 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CC------CCCTTCCHHHHHHHHHHHHHTSCCCCCGG----GEEEESH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHHhCCCCCHH----HEEEeCC
Confidence 457888888773 578899999 8775421 12 333345578888888888877775 444 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .++ +++.+ +++|++++++ ++++|
T Consensus 111 ~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-~~~l~~~l~~-~~~~v 178 (409)
T 2gb3_A 111 GSEAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVT--RRMEEGFAI-PQNLESFINE-RTKGI 178 (409)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEE--CCGGGTSCC-CTTGGGGCCT-TEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEec--cCCCCCCcc-HHHHHHhhCc-CCeEE
Confidence 88 8888888999999999999987776643 2335565554454 442 23455 8899988876 88999
Q ss_pred EEcCCCC--CCc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCC--CCCCcceEEEeCCCCCCCCCc--eEEEEE
Q 022564 200 VAGASAY--ARL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFEYADVVTTTTHKSLRGPR--GAMIFF 270 (295)
Q Consensus 200 ~l~~~n~--~~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~~~D~~~~s~~K~l~gp~--gG~l~~ 270 (295)
+++.++| |.. .++++|.++|++||+++|+|++|+.+........ ..+.+.|++++|+||+|+.|. .|++++
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 258 (409)
T 2gb3_A 179 VLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLIT 258 (409)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred EECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEE
Confidence 8875555 343 3589999999999999999999987544221111 011247999999999985333 499999
Q ss_pred eC-Cchh
Q 022564 271 RK-GVKE 276 (295)
Q Consensus 271 ~~-~~~~ 276 (295)
++ ++.+
T Consensus 259 ~~~~l~~ 265 (409)
T 2gb3_A 259 RNEELIS 265 (409)
T ss_dssp SCHHHHH
T ss_pred CcHHHHH
Confidence 98 6644
No 82
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.83 E-value=3.7e-20 Score=171.57 Aligned_cols=239 Identities=11% Similarity=0.024 Sum_probs=163.3
Q ss_pred CCCcchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCC----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHH
Q 022564 16 GVTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 91 (295)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~ 91 (295)
...|.++++++.....+..+..+.... ...+.|+|..|.+ ++++.+.+++.+.+.+... ....|+...+..
T Consensus 47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~-~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~----~~~~Y~~~~g~~ 121 (448)
T 3aow_A 47 LGDVERFFSKKALEMRASEVRELLKLV-ETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYAD----KALQYGTTKGFT 121 (448)
T ss_dssp TSCGGGGCCHHHHHCCCCHHHHHHHHH-HTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHH----HHHSCCCTTCCH
T ss_pred ccchHHHhhHHHhcCCCcHHHHHHHhc-cCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhH----HHhCCCCCCCcH
Confidence 345777777777777776666555532 3456789977755 2577888888887754100 001133334567
Q ss_pred HHHHHHHHHHHHHcCC-CCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeE
Q 022564 92 MAESLCQKRALEAFRL-DPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (295)
Q Consensus 92 ~l~~~~~~~la~~~g~-~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (295)
++++++.+++.+.+|+ +++ +|++|+|++ ++..++.+++++||+|++..+.|.++.. .+...|.++.
T Consensus 122 ~lr~~ia~~~~~~~g~~~~~----~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~~~~ 189 (448)
T 3aow_A 122 PLRETLMKWLGKRYGISQDN----DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEPQYI 189 (448)
T ss_dssp HHHHHHHHHHHHHHCCCTTS----EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEE
T ss_pred HHHHHHHHHHHHhcCcCChh----hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEE
Confidence 8887777887777798 554 899999999 8887889999999999999977666543 3334565554
Q ss_pred EEeeecCCCCCCCCHHHHHHHHh----h-cCCcEEEE-cCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccc
Q 022564 170 TMPYRLNESTGYIDYDQLEKSAT----L-FRPKLIVA-GASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 170 ~v~~~~~~~~~~id~e~l~~~i~----~-~~tk~i~l-~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.++ .+. + .+|+++|+++++ + .++++|++ +.++| |...+ +++|.++|++||++||+|++++.+...
T Consensus 190 ~v~--~~~-~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~ 265 (448)
T 3aow_A 190 QIP--LDD-E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS 265 (448)
T ss_dssp EEE--EET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCS
T ss_pred Eec--cCC-C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCC
Confidence 454 442 3 489999999997 3 27888854 55444 34444 679999999999999999998865442
Q ss_pred cCC----CCCCCCcceEEEeCCCCCCCCCc--eEEEEEeCCchh
Q 022564 239 AGV----IPSPFEYADVVTTTTHKSLRGPR--GAMIFFRKGVKE 276 (295)
Q Consensus 239 ~~~----~~~~~~~~D~~~~s~~K~l~gp~--gG~l~~~~~~~~ 276 (295)
... ......+.++.+.|++|+|+ |. .|++++++++.+
T Consensus 266 g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~ 308 (448)
T 3aow_A 266 GNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIR 308 (448)
T ss_dssp SCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHH
T ss_pred CCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHH
Confidence 211 11111136789999999986 43 499999987654
No 83
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.2e-20 Score=176.91 Aligned_cols=200 Identities=18% Similarity=0.137 Sum_probs=148.4
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC--CCCcceeEEeCCChH-HHHHHHHhhcC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD--PEKWGVNVQSLSGSP-SNFQVYTALLK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~--~~~~~~~v~~~sG~~-a~~~~~~al~~ 134 (295)
.++.+.+++.+.+.. +...++. .+...+...++++++++++++++|++ ++ ++++++|++ ++.+++.++.+
T Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~----~~~~~~ggt~a~~~a~~a~~~ 148 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTG----CGTTTSGGTESLLLACLSAKM 148 (497)
T ss_dssp CCHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTC----CEEEESSHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCC----eEEEcCcHHHHHHHHHHHHHH
Confidence 357788888777654 2111111 13444667889999999999999997 43 788888888 88878887754
Q ss_pred -----CC---CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 135 -----PH---DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 135 -----~g---d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
+| |+|+++.+.|+++.. .+...|.++..++ ++.+++.+|+++|++++++ +|++|+++.+++
T Consensus 149 ~~~~~~g~~~~~Vi~~~~~h~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~n 217 (497)
T 3mc6_A 149 YALHHRGITEPEIIAPVTAHAGFDK--------AAYYFGMKLRHVE--LDPTTYQVDLGKVKKFINK-NTVLLVGSAPNF 217 (497)
T ss_dssp HHHHHSCCSSCEEEEETTSCHHHHH--------HHHHSCCEEEEEC--BCTTTCSBCTTTTGGGCCS-SEEEEEEETTCT
T ss_pred HHHhcCCCCCceEEEeCCccHHHHH--------HHHHcCCeEEEEe--cCcccCcCCHHHHHHHHhh-CCEEEEEECCCC
Confidence 56 899999977776543 3445676665555 5533689999999999987 899999986554
Q ss_pred --CCccCHHHHHHHHHHcCCEEEEEcccccccccc----C---C--CCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 207 --ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA----G---V--IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 207 --~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~----~---~--~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|...|+++|.++|++||+++|+|++|+.+..+. + . ......++|++++++||++++|.| |+++++++.
T Consensus 218 ptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~ 297 (497)
T 3mc6_A 218 PHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSD 297 (497)
T ss_dssp TTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHH
T ss_pred CCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHH
Confidence 588999999999999999999999998654431 1 1 111123699999999999888888 999998764
Q ss_pred h
Q 022564 275 K 275 (295)
Q Consensus 275 ~ 275 (295)
.
T Consensus 298 ~ 298 (497)
T 3mc6_A 298 L 298 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.83 E-value=1.7e-20 Score=169.80 Aligned_cols=221 Identities=13% Similarity=0.148 Sum_probs=153.4
Q ss_pred CHHHHHHHHHHHHHHHcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--
Q 022564 31 DPEIADIIEHEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-- 106 (295)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-- 106 (295)
....|+...... ...+.|+|..+++ .+++.+.+++.+.+.+.. .+| + ....++++++++++++++|
T Consensus 18 g~~~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~--~~~~~~~~~l~~~l~~~~g~~ 87 (391)
T 4dq6_A 18 FSSKWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGY------T--TRPDSYNESIVNWLYRRHNWK 87 (391)
T ss_dssp TBHHHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCC------B--CCCHHHHHHHHHHHHHHHCCC
T ss_pred Cceeeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCC------C--CCCHHHHHHHHHHHHHHhCCC
Confidence 344555433321 1246789988877 357999999999886521 111 1 1236788889999999999
Q ss_pred CCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee-cCCCCCCCCH
Q 022564 107 LDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LNESTGYIDY 184 (295)
Q Consensus 107 ~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~id~ 184 (295)
++++ +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++ .+..++.+|+
T Consensus 88 ~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~d~ 155 (391)
T 4dq6_A 88 IKSE----WLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNRELIISPLQKLENGNYIMDY 155 (391)
T ss_dssp CCGG----GEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTCEEEECCCEECTTSCEECCH
T ss_pred CcHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCCeEEeeeeeecCCCceEeeH
Confidence 5665 799999999 8887889999999999999977776543 333556555555543 2223457999
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-------cceEE
Q 022564 185 DQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-------YADVV 252 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-------~~D~~ 252 (295)
+++++++++ +++|+++.++|+ .. .++++|.++|++||+++|+|++|+....... ...++. ...++
T Consensus 156 ~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~~~i~ 232 (391)
T 4dq6_A 156 EDIENKIKD--VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH-KHIPMASISKEFEKNTIT 232 (391)
T ss_dssp HHHHHHCTT--EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSCHHHHHTEEE
T ss_pred HHHHHHhhc--CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC-CccCHHHcCccccCcEEE
Confidence 999999975 888888755553 44 5788999999999999999999876443221 111111 13388
Q ss_pred EeCCCCCCC--CCceEEEEEeC-Cchh
Q 022564 253 TTTTHKSLR--GPRGAMIFFRK-GVKE 276 (295)
Q Consensus 253 ~~s~~K~l~--gp~gG~l~~~~-~~~~ 276 (295)
+.|+||+++ |.+.|++++++ ++.+
T Consensus 233 ~~s~sK~~g~~G~r~G~~~~~~~~~~~ 259 (391)
T 4dq6_A 233 CMAPTKTFNIAGLQSSYVVLPDEKDYK 259 (391)
T ss_dssp EECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred EEechhhccCcccceEEEEeCCHHHHH
Confidence 999999884 33449999887 5543
No 85
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.83 E-value=5.5e-20 Score=166.41 Aligned_cols=203 Identities=17% Similarity=0.161 Sum_probs=142.7
Q ss_pred cCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcc-cCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~-~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
..+++..+++ ++++.+.+++.+.+.+ +..+++..++ ++..... ..+++.+++++|++ + .+++++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~----~~l~~~la~~~g~~-~----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVH----QALEEELAEWLGYS-R----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHH----HHHHHHHHHHHTCS-E----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHH----HHHHHHHHHHhCCC-c----EEEeCCcH
Confidence 5688888775 4689999999998865 2112222211 1222333 34568888888986 3 78999996
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEE
Q 022564 123 PSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIV 200 (295)
Q Consensus 123 ~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~ 200 (295)
.++..++.+++++||.|+++.+.|+++... +...|.++..+ + .+|++++++++++. ++++++
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~--~------~~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLEA--------ASLSPSQLRRF--A------HNDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHH--------HHTSSSEEEEE--C------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHHH--------HHHcCCCEEEe--C------CCCHHHHHHHHHhcCCCCeEEE
Confidence 677778888999999999999877766432 23455444333 3 24899999999753 267777
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccc-cCCC-CCCC-CcceEEEeCCCCCCCCCceEEEEEeCCch
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVA-AGVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 275 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~-~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~ 275 (295)
+++++| |...|+++|.++|++||+++|+|++|+.|... .+.. ...+ .+.|++++|+||+++ |.||++++++++.
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~~~~ 252 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSSTVA 252 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECHHHH
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCHHHH
Confidence 775554 47889999999999999999999999877542 1110 0001 137899999999985 7789999988765
Q ss_pred h
Q 022564 276 E 276 (295)
Q Consensus 276 ~ 276 (295)
+
T Consensus 253 ~ 253 (384)
T 1bs0_A 253 D 253 (384)
T ss_dssp H
T ss_pred H
Confidence 4
No 86
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.83 E-value=6e-20 Score=168.97 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=140.8
Q ss_pred cCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-----CCCCCccee
Q 022564 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-----LDPEKWGVN 115 (295)
Q Consensus 47 ~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-----~~~~~~~~~ 115 (295)
+.|+|..|.+ ++++.+++++.+.+......+ |+...+..+++ +.++++++ ++++ +
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr----~~la~~~~~~~~~~~~~----~ 120 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNG------YAPSIGFLSSR----EEIASYYHCPEAPLEAK----D 120 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSS------CCCTTCCHHHH----HHHHHHHCBTTBCCCGG----G
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCC------CCCCCCcHHHH----HHHHHHHhhcCCCCChH----H
Confidence 4589987764 568999999999886532222 33334445565 55666666 5555 7
Q ss_pred EEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc
Q 022564 116 VQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (295)
Q Consensus 116 v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~ 194 (295)
|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..+++..+ +++.+|++++++++++
T Consensus 121 v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 121 VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGIEVKLYNLLPE-KSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHSSCCT-
T ss_pred EEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEecccc-cCCCCCHHHHHHHhcc-
Confidence 99999998 8887889999999999999976665532 33456666655654322 4578999999999977
Q ss_pred CCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--c---ceEEEeCCCCCCCCC-
Q 022564 195 RPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--Y---ADVVTTTTHKSLRGP- 263 (295)
Q Consensus 195 ~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~---~D~~~~s~~K~l~gp- 263 (295)
++++|+++.++| |...+ +++|+++|++||+++|+|++|......... ..++. + ..+++.|++|.|+.|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~-~~~~~~~~~~~~vi~~~S~sK~~~~~G 269 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK-YEPLATLSTDVPILSCGGLAKRWLVPG 269 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCC-CCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCc-CccHHHhCCCCcEEEEeeccccCCCcC
Confidence 788888875555 36667 999999999999999999998754332211 11111 1 236788999986543
Q ss_pred -ceEEEEEeC
Q 022564 264 -RGAMIFFRK 272 (295)
Q Consensus 264 -~gG~l~~~~ 272 (295)
+.|++++++
T Consensus 270 ~riG~~~~~~ 279 (427)
T 3dyd_A 270 WRLGWILIHD 279 (427)
T ss_dssp GCCEEEEEEC
T ss_pred cceEEEEecC
Confidence 349999885
No 87
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.83 E-value=1.1e-19 Score=165.55 Aligned_cols=193 Identities=15% Similarity=0.153 Sum_probs=139.2
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
+.+..++++.+++.+.+.+.|. . ..+ .....+++.+++++|.+ ++++++|++ ++..++.++
T Consensus 6 ~~p~~~~~v~~a~~~~~~~~~~---------~-~~g--~~~~~l~~~la~~~~~~------~v~~~~ggt~al~~~~~~l 67 (394)
T 1o69_A 6 SPPHMGGNELKYIEEVFKSNYI---------A-PLG--EFVNRFEQSVKDYSKSE------NALALNSATAALHLALRVA 67 (394)
T ss_dssp ------CCHHHHHHHHHHHTTT---------S-CTT--HHHHHHHHHHHHHHCCS------EEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHcCCc---------c-CCC--hHHHHHHHHHHHHhCCC------cEEEeCCHHHHHHHHHHHc
Confidence 3445677888999888865331 1 011 12233558888888872 688888888 888888998
Q ss_pred -cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCCCCc
Q 022564 133 -LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYARL 209 (295)
Q Consensus 133 -~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~~~~ 209 (295)
+++||+|+++.+.|+++.... ...|.++..+ +++ +++.+|++++++++++. ++++|++++ ..|..
T Consensus 68 ~~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~ 135 (394)
T 1o69_A 68 GVKQDDIVLASSFTFIASVAPI--------CYLKAKPVFI--DCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNA 135 (394)
T ss_dssp TCCTTCEEEEESSSCGGGTHHH--------HHTTCEEEEE--CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCC
T ss_pred CCCCCCEEEECCCccHHHHHHH--------HHcCCEEEEE--EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCCh
Confidence 999999999998888875433 2456555444 455 56889999999999753 689998875 34678
Q ss_pred cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCceEEEEEe-CCchh
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR-KGVKE 276 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~gG~l~~~-~~~~~ 276 (295)
.++++|.++|+++|+++|+|++|+.|....+.....+..+|+.++|.||.++++++|+++++ +++.+
T Consensus 136 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~ 203 (394)
T 1o69_A 136 AKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIE 203 (394)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHH
T ss_pred hhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHH
Confidence 99999999999999999999999977665443221223488999999999877667999996 45443
No 88
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.83 E-value=5e-20 Score=173.47 Aligned_cols=176 Identities=15% Similarity=0.080 Sum_probs=134.6
Q ss_pred CcchHHHHHHHHHHHHHHHcCCCC--CCcceeEEeCCChH-HHHHHHHhhcCCC--------CeEEEecCCCCcccCccc
Q 022564 86 GNEYIDMAESLCQKRALEAFRLDP--EKWGVNVQSLSGSP-SNFQVYTALLKPH--------DRIMALDLPHGGHLSHGY 154 (295)
Q Consensus 86 ~~~~~~~l~~~~~~~la~~~g~~~--~~~~~~v~~~sG~~-a~~~~~~al~~~g--------d~Vl~~~~~~~~~~~~~~ 154 (295)
......+++.++++++++++|++. +. +..++++|++ ++..++.++.++| |+|+++.+.|.++..
T Consensus 133 ~~p~~~~le~~l~~~la~~~g~~~~~~~--v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~--- 207 (514)
T 3mad_A 133 LWPSTAKFEAEVVAMTAHMLGGDAAGGT--VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK--- 207 (514)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTGGGGTSC--CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH---
T ss_pred cChHHHHHHHHHHHHHHHHcCCCCccCC--cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH---
Confidence 345667888889999999999873 31 1238888888 8888888887766 999999977777543
Q ss_pred cccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccc
Q 022564 155 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 155 ~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
.+...|.++..++ ++ +++.+|+++|++++++ ++++|+++.+++ |...|+++|.++|++||+++|+|++|
T Consensus 208 -----~~~~~G~~v~~v~--~~-~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~ 278 (514)
T 3mad_A 208 -----AAQYFGIKLVRTP--LD-ADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACL 278 (514)
T ss_dssp -----HHHHHTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred -----HHHHcCCeeEEee--eC-CCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccc
Confidence 3345676555554 55 4789999999999987 899999885555 58899999999999999999999998
Q ss_pred cccccc----cCC----CCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCch
Q 022564 233 ISGLVA----AGV----IPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 233 ~~g~~~----~~~----~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
+.+..+ .+. ......++|++++|+||++++|.| |+++++++..
T Consensus 279 ~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~ 330 (514)
T 3mad_A 279 GGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDL 330 (514)
T ss_dssp TTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHH
T ss_pred ccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHH
Confidence 865442 111 111123699999999999888877 9999988653
No 89
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.83 E-value=5.4e-20 Score=165.63 Aligned_cols=184 Identities=17% Similarity=0.149 Sum_probs=133.1
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al 132 (295)
+.+++++.+++++.+.+.+.+ .++ ... ...+++.+++++|++ ++++++|++ ++..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~----~~~l~~~la~~~~~~------~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKR----SLLFEEALCEFLGVK------HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SHH----HHHHHHHHHHHHTCS------EEEEESCHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------ChH----HHHHHHHHHHHhCCC------eEEEeCCHHHHHHHHHHHh
Confidence 566789999999999886522 111 122 234668888888875 577777777 888889998
Q ss_pred ---cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCc
Q 022564 133 ---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARL 209 (295)
Q Consensus 133 ---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~ 209 (295)
+++||+|+++.+.|+++.... ...|.++ +.+++++ ++.+|++++++++++ ++++|+++.+ .|..
T Consensus 68 ~~~~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~~--~~~~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~ 134 (375)
T 2fnu_A 68 SEFSADRNEIITTPISFVATANML--------LESGYTP--VFAGIKN-DGNIDELALEKLINE-RTKAIVSVDY-AGKS 134 (375)
T ss_dssp SCCCTTSCEEEECSSSCTHHHHHH--------HHTTCEE--EECCBCT-TSSBCGGGSGGGCCT-TEEEEEEECG-GGCC
T ss_pred cccCCCCCEEEECCCccHhHHHHH--------HHCCCEE--EEeccCC-CCCCCHHHHHhhcCc-CceEEEEeCC-cCCc
Confidence 899999999998888775432 2456444 4444553 348999999999876 8888877755 6788
Q ss_pred cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEe
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFR 271 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~ 271 (295)
.|+++|.++|++||+++|+|++|+.|....+.....+..+++.++|+||++ || | |+++++
T Consensus 135 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~ 195 (375)
T 2fnu_A 135 VEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TT-AEGGAVVT 195 (375)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CC-SSCEEEEE
T ss_pred cCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cc-cCceEEEe
Confidence 999999999999999999999999887653311111112555566677988 55 6 777764
No 90
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.83 E-value=1.5e-19 Score=166.20 Aligned_cols=211 Identities=11% Similarity=0.039 Sum_probs=150.6
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
.+.|+|..+++. +++.+++++.+.+.+....+ |+...+..++++++.+++.+.+|. +++ +|++|+|
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~la~~~~~~~g~~~~~~----~i~~t~g 113 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASI------YPNLDGLPELKQEASRFAKLFVNIDIPAR----ACVPTVG 113 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGS------CCCTTCCHHHHHHHHHHHHHHHCCCCCGG----GEEEESH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcC------CCCCCChHHHHHHHHHHHHHhhCCCCCcc----cEEEeCC
Confidence 467999888774 58999999998886422112 233344567887788888777775 444 7999999
Q ss_pred hH-HHHHHHHhhc--CCCC--eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC
Q 022564 122 SP-SNFQVYTALL--KPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRP 196 (295)
Q Consensus 122 ~~-a~~~~~~al~--~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t 196 (295)
++ ++.+++.+++ ++|| +|+++.+.|.++.. .+...|.++..++ ++++++.+|+++++++++..++
T Consensus 114 ~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~~~~ 183 (437)
T 3g0t_A 114 SMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFESFD--LFEYRGEKLREKLESYLQTGQF 183 (437)
T ss_dssp HHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCEEEE--GGGGCTTHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--ecCCCCccCHHHHHHHHhcCCc
Confidence 99 8887888888 9999 99999977666543 3345666665565 4435668999999999943489
Q ss_pred cEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC-------CC---CCcceEEEeCCCCCCC
Q 022564 197 KLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP-------SP---FEYADVVTTTTHKSLR 261 (295)
Q Consensus 197 k~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-------~~---~~~~D~~~~s~~K~l~ 261 (295)
++|+++.++|+ ...+ +++|+++|++||+++|+|++|+.......... .. ..+.++++.|+||+++
T Consensus 184 ~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 263 (437)
T 3g0t_A 184 CSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFS 263 (437)
T ss_dssp CEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTS
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCC
Confidence 99998755553 4444 77889999999999999999975443311100 01 1246799999999875
Q ss_pred --CCceEEEEEeCCchh
Q 022564 262 --GPRGAMIFFRKGVKE 276 (295)
Q Consensus 262 --gp~gG~l~~~~~~~~ 276 (295)
|.+.|++++++++.+
T Consensus 264 ~~G~r~G~~~~~~~~~~ 280 (437)
T 3g0t_A 264 YAGQRIGVLMISGKLYE 280 (437)
T ss_dssp CGGGCCEEEEECHHHHH
T ss_pred CccceeEEEEECHHHhh
Confidence 233499999877654
No 91
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.83 E-value=2.6e-20 Score=168.11 Aligned_cols=208 Identities=13% Similarity=0.180 Sum_probs=144.8
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.|+|..+++. +++.+.+++.+.+.+.. .+|+. . ..++++++++++++.+| ++++ +|++++|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~--~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g~ 91 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTL------P--PENIGDIICNWTKKQYNWDIQKE----WIVFSAGI 91 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCC------C--CTTHHHHHHHHHHHHHCCCCCGG----GEEEESCH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCC------C--CHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 56888877763 58999999999886521 12221 1 34677778899999999 5565 79999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++.+..++.+|++++++++++ ++++|++
T Consensus 92 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i 162 (383)
T 3kax_A 92 VPALSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLMLL 162 (383)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-TCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-CCeEEEE
Confidence 9 8877889999999999999977766543 3335565554454332212356899999999965 8999998
Q ss_pred cCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC----cceEEEeCCCCCCC--CCceEEE
Q 022564 202 GASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE----YADVVTTTTHKSLR--GPRGAMI 268 (295)
Q Consensus 202 ~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~----~~D~~~~s~~K~l~--gp~gG~l 268 (295)
+.++|+ ...+ +++|.++|++||+++|+|++|+........... .+. +.++++.|++|+++ |.+.|++
T Consensus 163 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (383)
T 3kax_A 163 CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASII 242 (383)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEE
Confidence 855553 4444 667777799999999999998764432211110 010 24588999999874 2233998
Q ss_pred EE-eCCchh
Q 022564 269 FF-RKGVKE 276 (295)
Q Consensus 269 ~~-~~~~~~ 276 (295)
++ ++++.+
T Consensus 243 ~~~~~~~~~ 251 (383)
T 3kax_A 243 IIPNEKLRQ 251 (383)
T ss_dssp ECCCHHHHH
T ss_pred EeCCHHHHH
Confidence 88 455543
No 92
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.83 E-value=5.7e-20 Score=167.17 Aligned_cols=204 Identities=15% Similarity=0.124 Sum_probs=146.2
Q ss_pred cCceecCCCC--C-CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~--~-~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
+.++|..+++ . +++.+.+++.+.+.+. ..++.+ |....+..++.+++++++++++|.+ ++++++|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~---~~~~~g~~~~~~~l~~~la~~~g~~------~v~~~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKY-GTGCAG---SRFLNGTLDIHVELEEKLSAYVGKE------AAILFSTGF 113 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHH-CSCCCS---BTTTTCCCHHHHHHHHHHHHHHTCS------EEEEESSHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHc-CCCCCC---cCcccCCcHHHHHHHHHHHHHhCCC------cEEEECCHH
Confidence 4678888865 2 6889999999887652 112211 1111223456677889999999863 678888888
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc---CCcEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF---RPKLI 199 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~---~tk~i 199 (295)
++..++.+++++||.|+++.+.|+++.. .+...|.++..+ +. +|++++++++++. ++++|
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~~~~v--~~------~d~~~l~~~l~~~~~~~~~~v 177 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFSKVIKY--GH------NNMEDLRAKLSRLPEDSAKLI 177 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSEEEEE--CT------TCHHHHHHHHHTSCSSSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCceEEe--CC------CCHHHHHHHHHhhccCCceEE
Confidence 8888899999999999999987777644 233456444333 32 5899999999763 68888
Q ss_pred EEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccccccc-CCC--C-CCCC-cceEEEeCCCCCCCCCceEEEEEeC
Q 022564 200 VAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GVI--P-SPFE-YADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 200 ~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~--~-~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
+++++++ |...++++|.++|++||+++|+|++|+.+.... +.. . .+.. .+|++++|+||+++ |.||++++++
T Consensus 178 ~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~ 256 (398)
T 3a2b_A 178 CTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA 256 (398)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH
Confidence 8875555 478899999999999999999999998775421 110 0 0111 26999999999885 7779999988
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 257 ~~~~~ 261 (398)
T 3a2b_A 257 DVIDF 261 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 93
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.83 E-value=1e-20 Score=172.62 Aligned_cols=231 Identities=13% Similarity=0.066 Sum_probs=158.7
Q ss_pred cccccCHHHHHHHHHHHHHHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHH
Q 022564 26 PLEVVDPEIADIIEHEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE 103 (295)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~ 103 (295)
++..++++.+..+.+. ....+.|+|..+++. +++.+.+++.+.+.+....+ |+...+..++++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~la~~~~~ 76 (410)
T 3e2y_A 4 RIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQ------YTRGFGHPALVKALSCLYGK 76 (410)
T ss_dssp GGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGS------CCCTTCCHHHHHHHHHHHHH
T ss_pred hhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccC------CCCCCChHHHHHHHHHHHHH
Confidence 3445555555554432 223467999888774 68999999998876421112 23333457788888888888
Q ss_pred HcCC--CC-CCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC---
Q 022564 104 AFRL--DP-EKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN--- 176 (295)
Q Consensus 104 ~~g~--~~-~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--- 176 (295)
.+|. ++ + +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|..+..++++..
T Consensus 77 ~~~~~~~~~~----~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~ 144 (410)
T 3e2y_A 77 IYQRQIDPNE----EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTD 144 (410)
T ss_dssp HHTSCCCTTT----SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCC
T ss_pred HhCCCCCCCC----CEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEeccccccc
Confidence 7775 34 3 799999998 8887889999999999999977766543 33355655555554321
Q ss_pred -----CCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCC----C
Q 022564 177 -----ESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGV----I 242 (295)
Q Consensus 177 -----~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~ 242 (295)
..++.+|++++++++++ ++++|+++.++|+ .. .++++|+++|++||+++|+|++|+........ .
T Consensus 145 g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 223 (410)
T 3e2y_A 145 GMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIA 223 (410)
T ss_dssp SSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred cccccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHH
Confidence 12456899999999976 8999999855553 33 47999999999999999999998754332211 1
Q ss_pred CCC-CCcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 243 PSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 243 ~~~-~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
... ..+.++++.|++|+++ |.+.|++++++++.+
T Consensus 224 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~ 260 (410)
T 3e2y_A 224 TLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIK 260 (410)
T ss_dssp GSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHH
T ss_pred HcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHH
Confidence 111 0135588999999885 334499999887654
No 94
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.83 E-value=1.1e-19 Score=161.36 Aligned_cols=200 Identities=14% Similarity=0.113 Sum_probs=141.8
Q ss_pred HHHcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 44 RQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 44 ~~~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..++.|+|+.++++ ++|.+.+++.+.+.... +|+ .....+ +++.+++++|++++ +|++|+|
T Consensus 14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~~~----lr~~la~~~~~~~~----~i~~t~G 76 (337)
T 3p1t_A 14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RYP-------FDAEPR----VMRKLAEHFSCPED----NLMLVRG 76 (337)
T ss_dssp CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SCC-------TTHHHH----HHHHHHHHHTSCGG----GEEEESH
T ss_pred CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cCC-------CCchHH----HHHHHHHHhCcCHH----HEEEeCC
Confidence 33467999999885 68999999988775411 222 123344 45788888899876 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.++ +||+|+++.+.|.++.. .+...|.++..+ +.+ +++.+|+++++++ . ++++++
T Consensus 77 ~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~--~-~~~~v~ 140 (337)
T 3p1t_A 77 IDECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGLRHFEI--GLT-DDLLLDPNDLAQV--S-RDDCVV 140 (337)
T ss_dssp HHHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCCEEEEE--CBC-TTSSBCHHHHTTC--C-TTEEEE
T ss_pred HHHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCCEEEEe--cCC-CCCCCCHHHHHhh--c-CCCEEE
Confidence 99 777566666 99999999977766543 334556555444 455 4678999999876 2 788998
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
++.++| |...|+++|.++|+++++ +++|++|+.. .............++++.|++|+++ |.+.|++++++++.+
T Consensus 141 i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~-~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~ 218 (337)
T 3p1t_A 141 LANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDY-SSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIA 218 (337)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGG-SSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhh-ccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHH
Confidence 885555 488999999999999997 5669998632 1111111122247899999999984 445599999887655
Q ss_pred hh
Q 022564 277 IN 278 (295)
Q Consensus 277 ~~ 278 (295)
..
T Consensus 219 ~l 220 (337)
T 3p1t_A 219 AM 220 (337)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 95
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.82 E-value=2.9e-19 Score=161.04 Aligned_cols=211 Identities=12% Similarity=0.056 Sum_probs=149.7
Q ss_pred CceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH
Q 022564 48 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~ 123 (295)
.|+|..+++. +++.+.+++.+.+.+... . ...|+.... .++++++.+++.+.+|. +++ +|++++|++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~-~---~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~----~v~~~~G~~ 102 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIAT-E---LNRYPERDA-VELRDELAAYITKQTGVAVTRD----NLWAANGSN 102 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGG-G---TTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGG----GEEEESHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhccc-c---cccCCCccH-HHHHHHHHHhhhhcccCCCChH----hEEECCChH
Confidence 3888888874 588999999988754210 0 011222223 57787777777776554 554 799999998
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++||+|+++.+.|+++.. .+...|.++..++ .+ +++.+|++++++++++.++++|+++
T Consensus 103 ~al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 103 EILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTEFIAVS--RG-ADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp HHHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEE--CC-TTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CC-cCCCCCHHHHHHHhhccCCCEEEEe
Confidence 7777888999999999999988776643 2334565554444 44 4568999999999975478999997
Q ss_pred CCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCC-CCCc-ceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 203 ASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEY-ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 203 ~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~-~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
.++| |...|++++.++|+.+++++|+|++|+.+......... .-.+ .++++.|+||+|+.| +.|++++++++.+
T Consensus 172 ~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 251 (369)
T 3cq5_A 172 TPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFID 251 (369)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHH
Confidence 5555 47889999999999999999999999866532111110 1113 569999999998533 3499999987655
Q ss_pred hh
Q 022564 277 IN 278 (295)
Q Consensus 277 ~~ 278 (295)
..
T Consensus 252 ~l 253 (369)
T 3cq5_A 252 AV 253 (369)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 96
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.82 E-value=1e-19 Score=169.85 Aligned_cols=206 Identities=11% Similarity=0.083 Sum_probs=143.2
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ 127 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~ 127 (295)
+.|........|.+.+++.+.+.. | .+... .....+..+++.++++++++++|++. .+++++|++ ++.+
T Consensus 69 ~~lg~~~~~~~p~v~~~~~~~~~~-~---~~~~~-~~~~~g~~~l~~~l~~~la~~~g~~~-----~~~~~~ggt~a~~~ 138 (474)
T 1wyu_B 69 YPLGSCTMKYNPKLHEEAARLFAD-L---HPYQD-PRTAQGALRLMWELGEYLKALTGMDA-----ITLEPAAGAHGELT 138 (474)
T ss_dssp CCBTTTCCCCCCHHHHHHHHTTSS-C---CTTSC-GGGCHHHHHHHHHHHHHHHHHHTCSE-----EECCCSSHHHHHHH
T ss_pred cccccccccCCHHHHHHHHHHHHh-c---CCCCc-hhhChHHHHHHHHHHHHHHHHHCCCc-----eeecChHHHHHHHH
Confidence 455422223346677777665322 2 12110 00235667888889999999999875 566767776 7665
Q ss_pred HHHhh----cCCCC-----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE
Q 022564 128 VYTAL----LKPHD-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL 198 (295)
Q Consensus 128 ~~~al----~~~gd-----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~ 198 (295)
++.++ .++|| +|+++.+.|+++... +...|.++..++ .+ +++.+|+++|++++++ ++++
T Consensus 139 al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~--------~~~~G~~vv~v~--~~-~~~~~d~~~L~~~i~~-~t~~ 206 (474)
T 1wyu_B 139 GILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT--------ASMAGYQVREIP--SG-PEGEVDLEALKRELGP-HVAA 206 (474)
T ss_dssp HHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH--------HHHTTCEEEEEC--BC-TTSSBCHHHHHHHCST-TEEE
T ss_pred HHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH--------HHHCCCEEEEec--CC-CCCCcCHHHHHHhhCC-CceE
Confidence 44443 46888 999999888777542 335665555554 55 4688999999999986 8999
Q ss_pred EEEcCCCC-CCc-cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCc-----e-EEEEE
Q 022564 199 IVAGASAY-ARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-----G-AMIFF 270 (295)
Q Consensus 199 i~l~~~n~-~~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~-----g-G~l~~ 270 (295)
|+++++|+ |.. .++++|+++|++||+++|+|++|+.+... .... .-.++|++++|+||+|++|. + |++++
T Consensus 207 v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g-~~~~-~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 207 LMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMG-WARP-GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp EEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT-TCCH-HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred EEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc-CCCc-ccCCCcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 99986665 555 69999999999999999999999766542 1111 00148999999999998773 4 99999
Q ss_pred eCCchhhh
Q 022564 271 RKGVKEIN 278 (295)
Q Consensus 271 ~~~~~~~~ 278 (295)
++++.+..
T Consensus 285 ~~~l~~~l 292 (474)
T 1wyu_B 285 KAHLAPYL 292 (474)
T ss_dssp CGGGGGGC
T ss_pred cHHHHHhC
Confidence 99875433
No 97
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.82 E-value=4e-20 Score=169.70 Aligned_cols=210 Identities=13% Similarity=0.139 Sum_probs=150.4
Q ss_pred HcCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCC
Q 022564 46 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG 121 (295)
++.|+|..+++ .++|.+.+++.+.+.+.. .+|+ . ...++++++++++++.+| ++++ +|++++|
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~--~~~~l~~~l~~~l~~~~g~~~~~~----~v~~~~g 127 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYN------Y--FNDDLYQAVIDWERKEHDYAVVKE----DILFIDG 127 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCB------C--CCHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCC------C--CCHHHHHHHHHHHHHHhCCCCCHH----HEEEcCC
Confidence 46788877765 358999999999886521 1221 1 126788889999999998 4554 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++.+++.+++++||+|++..+.|.++.. .+...|.++..+++.....++.+|+++|++++++.++++|+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vi 199 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYL 199 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEE
Confidence 99 8888999999999999999977766543 33355655655654322244578999999999844899999
Q ss_pred EcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccC----CCCCC--CCcceEEEeCCCCCCC--CCceEE
Q 022564 201 AGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSP--FEYADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 201 l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~--~~~~D~~~~s~~K~l~--gp~gG~ 267 (295)
+++++++ .. .++++|.++|++||+++|+|++|+....... ..... ..+.++++.|++|+|+ |.+.|+
T Consensus 200 l~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~ 279 (421)
T 3l8a_A 200 LCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279 (421)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEE
T ss_pred ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEe
Confidence 9855553 44 5799999999999999999999875332211 11111 1135588999999885 334499
Q ss_pred EEEe-CCchh
Q 022564 268 IFFR-KGVKE 276 (295)
Q Consensus 268 l~~~-~~~~~ 276 (295)
++++ +++.+
T Consensus 280 ~~~~~~~l~~ 289 (421)
T 3l8a_A 280 AIIQNESLRR 289 (421)
T ss_dssp EECCSHHHHH
T ss_pred EEcCCHHHHH
Confidence 9988 55544
No 98
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.82 E-value=9.9e-20 Score=170.17 Aligned_cols=180 Identities=12% Similarity=0.041 Sum_probs=131.5
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCCcc------eeEEeCCChH-HHHHHHHhhc-------------------CCCC
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEKWG------VNVQSLSGSP-SNFQVYTALL-------------------KPHD 137 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~~~------~~v~~~sG~~-a~~~~~~al~-------------------~~gd 137 (295)
|...+...++|+.+.+++++++|.+.+.+. ...++++|++ +++.++.+.. .+++
T Consensus 110 ~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 189 (481)
T 4e1o_A 110 WASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARL 189 (481)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTE
T ss_pred cCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCe
Confidence 455577889999999999999998753100 0456667766 7776665542 1678
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcC-----CcEEEEc-CCCC-CCcc
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASAY-ARLY 210 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~-----tk~i~l~-~~n~-~~~~ 210 (295)
.|+++...|.++... +.+.|.++..++ ++ +++.+|+++|++++++.+ +.+|+++ .+++ |...
T Consensus 190 ~v~~s~~~H~s~~~~--------~~~~g~~~~~v~--~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id 258 (481)
T 4e1o_A 190 VAYASDQAHSSVEKA--------GLISLVKMKFLP--VD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFD 258 (481)
T ss_dssp EEEEETTSCHHHHHH--------HHHHTCEEEEEC--CC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred EEEEcCcchHHHHHH--------HHhCCCceEEEE--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcC
Confidence 999999888776543 335565555554 55 578999999999997521 5556665 3333 7899
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|+++|+++|++||+++++|+||+.+.+...... .++..+|++++++||||++|.| |+++++++.
T Consensus 259 ~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~ 326 (481)
T 4e1o_A 259 CLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKY 326 (481)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHH
T ss_pred CHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHH
Confidence 999999999999999999999988765432211 1222479999999999999999 999998763
No 99
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.82 E-value=7.8e-20 Score=165.80 Aligned_cols=194 Identities=13% Similarity=0.101 Sum_probs=141.8
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
+.|+|.. +..++++++++.+.+.+.+ +.......+ +++.+++++|.+ ++++++|++ ++
T Consensus 9 ~~i~~~~--p~~~~~~~~a~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~------~~~~~~~gt~al 67 (393)
T 1mdo_A 9 DFLPFSR--PAMGAEELAAVKTVLDSGW---------ITTGPKNQE----LEAAFCRLTGNQ------YAVAVSSATAGM 67 (393)
T ss_dssp CCBCSCC--CCCCHHHHHHHHHHHHHTC---------CSSSHHHHH----HHHHHHHHHCCS------EEEEESCHHHHH
T ss_pred cccccCC--CCCCHHHHHHHHHHHhcCC---------cCCChHHHH----HHHHHHHHhCCC------cEEEecChHHHH
Confidence 3567754 4467888999998886532 111233333 557888888874 456666666 88
Q ss_pred HHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 126 FQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 126 ~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
..++.++ +++||+|+++.+.|+++... +...|.++..+ +++++++.+|++++++++++ ++++|++++
T Consensus 68 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~- 135 (393)
T 1mdo_A 68 HIALMALGIGEGDEVITPSMTWVSTLNM--------IVLLGANPVMV--DVDRDTLMVTPEHIEAAITP-QTKAIIPVH- 135 (393)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEE--CBCTTTCCBCHHHHHHHCCT-TEEEECCBC-
T ss_pred HHHHHHcCCCCCCEEEeCCCccHhHHHH--------HHHCCCEEEEE--eccCCcCCCCHHHHHHhcCC-CceEEEEeC-
Confidence 8888999 89999999999888776432 23456555444 45544578999999999986 889888764
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCCCceEEEEEe-CCchh
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFR-KGVKE 276 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~gp~gG~l~~~-~~~~~ 276 (295)
..|...++++|.++|+++|+++|+|++|+.|....+ .+.+. .|++++|+| |++++++||+++++ +++.+
T Consensus 136 ~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~ 207 (393)
T 1mdo_A 136 YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKG-RHIGA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFAD 207 (393)
T ss_dssp GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETT-EETTS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECC-eecCC--CCeEEEeCCCCCccccccceEEEeCCHHHHH
Confidence 246778999999999999999999999998765432 11111 799999999 99988888999997 45543
No 100
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.82 E-value=5.9e-20 Score=171.81 Aligned_cols=196 Identities=10% Similarity=0.074 Sum_probs=138.4
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCc-----ceeEEeCCChH-HHHHHHHhh
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGSP-SNFQVYTAL 132 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~-----~~~v~~~sG~~-a~~~~~~al 132 (295)
+..+.+++...+.. . ...|.......++++.+++++++++|++.+.. ...+++|+|++ +++.++.++
T Consensus 87 ~~~~~~~~~~~~n~-~------~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAIGC-I------GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHHCC-C------CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-C------ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 34466666666532 1 11234446678899999999999999974200 01577888888 777666655
Q ss_pred cCC---------CC--------e--EEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 133 LKP---------HD--------R--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 133 ~~~---------gd--------~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
..+ || + |+++.+.|.++.. .+...|.++..++ ++ +++.+|+++|++++++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~--------~~~~~G~~v~~v~--~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER--------AGLIGGVKLKAIP--SD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH--------HHHhCCCceEEee--cC-CCCCCCHHHHHHHHHH
Confidence 321 43 4 7788877776543 3446676665554 55 5789999999999976
Q ss_pred cCCc------EEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccC-CCC--CCCCcceEEEeCCCCCCCC
Q 022564 194 FRPK------LIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG-VIP--SPFEYADVVTTTTHKSLRG 262 (295)
Q Consensus 194 ~~tk------~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-~~~--~~~~~~D~~~~s~~K~l~g 262 (295)
+++ +|+++ ++|+ |...|+++|+++|++||+++++|+||+.+.+... ... .++.++|++++++|||+++
T Consensus 229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 453 66666 3333 6889999999999999999999999988766442 211 1233689999999999998
Q ss_pred Cce-EEEEEeCC
Q 022564 263 PRG-AMIFFRKG 273 (295)
Q Consensus 263 p~g-G~l~~~~~ 273 (295)
|.+ |+++++++
T Consensus 308 p~~~G~l~~~~~ 319 (486)
T 1js3_A 308 NFDCSAMWVKRR 319 (486)
T ss_dssp CSSCEEEEESCH
T ss_pred CcceEEEEEeCH
Confidence 888 99999876
No 101
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.82 E-value=7.1e-20 Score=165.11 Aligned_cols=222 Identities=14% Similarity=0.034 Sum_probs=151.0
Q ss_pred CHHHHHHHHHHHHHH---HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc
Q 022564 31 DPEIADIIEHEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF 105 (295)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~ 105 (295)
+++.+..+.+..+.. .+.|+|..+++. +++.+.+++.+.+.... + |+...+..++++++.+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~------y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHSLN--I------YPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGGGG--S------CCCTTCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhhcC--C------CCCCCCCHHHHHHHHHHHHHHh
Confidence 444455555433221 256889888774 57899999988773311 2 2333445788888889998888
Q ss_pred CC--CCCCcceeEEeCCChH-HHHHHHHhhcCC--CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC
Q 022564 106 RL--DPEKWGVNVQSLSGSP-SNFQVYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG 180 (295)
Q Consensus 106 g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 180 (295)
|+ +++ +|++|+|++ ++..++.+++++ ||+|+++.+.|.++.. .+...|.++..++ .+.+ .
T Consensus 77 g~~~~~~----~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~-~ 141 (376)
T 3ezs_A 77 KIELKEN----ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKAKSLLMP--LTKE-N 141 (376)
T ss_dssp SCCCCGG----GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGG-G
T ss_pred CCCCCHH----HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCCEEEEcc--cCCC-C
Confidence 97 554 899999999 888788999999 9999999977766543 3335565555554 4422 2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC-C--------C
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS-P--------F 246 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~--------~ 246 (295)
.+++ ++++++.+ ++++|+++.++|+ ...+ +++|.++|++||+++|+|++|+........... . .
T Consensus 142 ~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (376)
T 3ezs_A 142 DFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEA 219 (376)
T ss_dssp TSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTT
T ss_pred Ccch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccc
Confidence 3444 67777776 8999999855553 4444 777888899999999999998764432211100 0 1
Q ss_pred CcceEEEeCCCCCCC--CCceEEEEEeCCchhh
Q 022564 247 EYADVVTTTTHKSLR--GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 247 ~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~ 277 (295)
.+.++++.|++|+++ |.+.|+++.++++.+.
T Consensus 220 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 252 (376)
T 3ezs_A 220 FKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEK 252 (376)
T ss_dssp CTTEEEEEESTTTTTCGGGCCEEEEECHHHHHH
T ss_pred cCcEEEEecchhccCCccceeEEEeeCHHHHHH
Confidence 237799999999984 3334999988776543
No 102
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.82 E-value=1.3e-19 Score=170.08 Aligned_cols=198 Identities=15% Similarity=0.077 Sum_probs=141.0
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh---
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--- 132 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--- 132 (295)
..++.+.+++.....+. +...|...+...++++.+++++++++|+++.. .+++++|++ ++..++.++
T Consensus 111 ~~~~~v~~~~~~~~~n~------~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQ------SMDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CBHHHHHHHHHHHHHCC------CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEESSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhhcc------cccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcCCchHHHHHHHHHHHHH
Confidence 34677777776554431 11123444567889999999999999996522 788888888 777666652
Q ss_pred -c---------CC------CC-eEEEecCCCCcccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHh
Q 022564 133 -L---------KP------HD-RIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSAT 192 (295)
Q Consensus 133 -~---------~~------gd-~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~ 192 (295)
+ .+ || .|+++...|.++..... ..|. .+..++ .+ +++.+|+++|+++++
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~--------~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~ 250 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS--------WMGLGEKAVMTVD--AN-ADGTMDITKLDEVIA 250 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH--------HTTSCGGGEEEEC--BC-TTSSBCGGGHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH--------HcCCCcccEEEEe--cC-CCCcCCHHHHHHHHH
Confidence 3 13 46 78888888877654332 2332 344454 55 568999999999997
Q ss_pred hc---CCc--EEEEc-CCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCC--CCCCCcceEEEeCCCCCCCCC
Q 022564 193 LF---RPK--LIVAG-ASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVI--PSPFEYADVVTTTTHKSLRGP 263 (295)
Q Consensus 193 ~~---~tk--~i~l~-~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~--~~~~~~~D~~~~s~~K~l~gp 263 (295)
+. .++ +|+++ .+|+ |...|+++|+++|++||+++|+|++|+.+....+.. ...+.++|++++|+|||+++|
T Consensus 251 ~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p 330 (497)
T 2qma_A 251 QAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQT 330 (497)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCC
T ss_pred HHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCC
Confidence 52 244 66665 3443 689999999999999999999999998887765411 112235899999999999999
Q ss_pred ce-EEEEEeCCc
Q 022564 264 RG-AMIFFRKGV 274 (295)
Q Consensus 264 ~g-G~l~~~~~~ 274 (295)
.+ |+++++++.
T Consensus 331 ~~~G~l~~~~~~ 342 (497)
T 2qma_A 331 ISCGALLVNDKS 342 (497)
T ss_dssp SSCEEEEESCGG
T ss_pred cceEEEEEeCHH
Confidence 88 999998764
No 103
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.82 E-value=3.1e-19 Score=162.04 Aligned_cols=192 Identities=18% Similarity=0.178 Sum_probs=137.8
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (295)
+++..+.+..++++++++.+.+.+.+ |.......+ +++.+++++|.+. .+++++|+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sGt~a~~~a 65 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSKM---------FTMGEYVKQ----YETQFAKTFGSKY-----AVMVSSGSTANLLM 65 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHTC---------CSSCHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcCC---------CCCChHHHH----HHHHHHHHHCCCc-----EEEECCHHHHHHHH
Confidence 44555677789999999999886521 122233343 5578888888863 68888887788778
Q ss_pred HHhh-------cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 129 YTAL-------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 129 ~~al-------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+.++ +++||+|+++.++|.++..... ..|.++..+ +++++++.+|++++++++++ +|++|++
T Consensus 66 l~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~--------~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 134 (390)
T 3b8x_A 66 IAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQ--------QYGLRVKFV--DIDINTLNIDIESLKEAVTD-STKAILT 134 (390)
T ss_dssp HHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHH--------HTTCEEEEE--CBCTTTCSBCHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHH--------HcCCEEEEE--ecCccccCcCHHHHHHHhCc-CCeEEEE
Confidence 8888 7899999999988888765332 456445444 45544589999999999987 8999888
Q ss_pred cCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeC--CCCCCCCCceEEEEEeC
Q 022564 202 GASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRGPRGAMIFFRK 272 (295)
Q Consensus 202 ~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s--~~K~l~gp~gG~l~~~~ 272 (295)
++ .+|...++++|.++|++||+++|+|++|+.|.... ....+. ..|+.++| .+|.++++.||++++++
T Consensus 135 ~~-~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~-~~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~ 204 (390)
T 3b8x_A 135 VN-LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFN-NKCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDD 204 (390)
T ss_dssp EC-GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEET-TEETTS-SSSEEEEECCTTSSSCSSSCEEEEESC
T ss_pred EC-CccChhhHHHHHHHHHHcCCEEEEECcCcccCEEC-Cccccc-ccceEEEEccCCCCCccCCceEEEeCC
Confidence 62 23456899999999999999999999999887662 222221 13555433 34447677789999987
No 104
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.82 E-value=9.4e-20 Score=165.71 Aligned_cols=208 Identities=13% Similarity=0.191 Sum_probs=146.3
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.++|..+++ .+++.+.+++.+.+.+.. .+ |+.. ..++++++.+++++.+| ++++ +|++|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LG------YTGP--TEEYKKTVKKWMKDRHQWDIQTD----WIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CS------SBCC--CHHHHHHHHHHHHHHHCCCCCGG----GEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CC------CCCC--cHHHHHHHHHHHHHHhCCCCChh----hEEEcCCH
Confidence 5788887777 358899999998875421 12 2221 56788888888888788 5554 79999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++++.+..++.+|++++++++++.++++|++
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 8 8888889999999999999977776543 233455545444432111124699999999997338899988
Q ss_pred cCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCCC-------CcceEEEeCCCCCCC--CCceEE
Q 022564 202 GASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-------EYADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 202 ~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-------~~~D~~~~s~~K~l~--gp~gG~ 267 (295)
+.++| |...+ +++|+++|++||+++|+|++|+....... ...++ ...++++.|++|+++ |.+.|+
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 249 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY-EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSN 249 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC-CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CcccHHHcCccccCcEEEEEeChhhccccchheEE
Confidence 75555 35666 99999999999999999999886443221 11111 125688999999884 333499
Q ss_pred EEEeC-Cchh
Q 022564 268 IFFRK-GVKE 276 (295)
Q Consensus 268 l~~~~-~~~~ 276 (295)
+++++ ++.+
T Consensus 250 ~~~~~~~~~~ 259 (399)
T 1c7n_A 250 IIIKNPDIRE 259 (399)
T ss_dssp EECCCHHHHH
T ss_pred EEECCHHHHH
Confidence 99875 4543
No 105
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.82 E-value=5.6e-20 Score=167.99 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=138.7
Q ss_pred CceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCc-ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 48 ~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
.+.|+.+.+ ++++.+.+++.+.+.+.+ +++... ++. .........+++++++++|++++ +|++++|++ +
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 100 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNS--AGWRDLSERLGNRLATLIGARDG----EVVVTDTTSIN 100 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHH--TSGGGHHHHHHHHHHTTTTCCTT----SEEECSCHHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccch--hhHHHHHHHHHHHHHHHcCCCcc----cEEEeCChhHH
Confidence 456654443 568889999999886533 222110 111 01123444577999999999875 788899988 6
Q ss_pred HHHHHHhhc------CCCCeEE-EecCCCCcccCccccccccccccc--eeeeEEEeeecCCCCCCCCHHHHHHHHhhcC
Q 022564 125 NFQVYTALL------KPHDRIM-ALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFR 195 (295)
Q Consensus 125 ~~~~~~al~------~~gd~Vl-~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~ 195 (295)
+..++.+++ ++||+|+ +....|+++....... +... |.++..++ . ++++++++++ +
T Consensus 101 l~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~----~~~~~~g~~~~~v~--~--------~~~l~~~i~~-~ 165 (416)
T 1qz9_A 101 LFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGL----ADMLQQGYTLRLVD--S--------PEELPQAIDQ-D 165 (416)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHH----HHHHCSSCEEEEES--S--------GGGHHHHCST-T
T ss_pred HHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHH----HHHhcCCceEEEeC--c--------HHHHHHHhCC-C
Confidence 655777765 8999754 4455777654332211 0112 54443332 1 6788888876 8
Q ss_pred CcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCC-CCCce-EEEEEe
Q 022564 196 PKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL-RGPRG-AMIFFR 271 (295)
Q Consensus 196 tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l-~gp~g-G~l~~~ 271 (295)
+++|+++.+++ |...|+++|.++|++||+++|+|++|+.|..+.+.... ++|++++|+||++ +||++ |+++++
T Consensus 166 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~g~~~~g~l~~~ 242 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA---GADYAIGCTYKYLNGGPGSQAFVWVS 242 (416)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEEECSSSTTCCCTTCCCEEEEC
T ss_pred ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc---CCCEEEecCcccCCCCCCCeEEEEEC
Confidence 99998875554 57889999999999999999999999877654332222 3899999999998 46777 999999
Q ss_pred CCchh
Q 022564 272 KGVKE 276 (295)
Q Consensus 272 ~~~~~ 276 (295)
+++.+
T Consensus 243 ~~~~~ 247 (416)
T 1qz9_A 243 PQLCD 247 (416)
T ss_dssp TTTTT
T ss_pred HHHHh
Confidence 98754
No 106
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.82 E-value=1.9e-20 Score=169.02 Aligned_cols=193 Identities=12% Similarity=0.115 Sum_probs=137.0
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (295)
+++..+.+..++++.+++.+.+...+ |.......+ +++.+++++|.+. .+++++|+.++..+
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sgt~al~~~ 67 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNW---------FILGDEDKK----FEQEFADYCNVNY-----CIGCGNGLDALHLI 67 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSSHHHHH----HHHHHHHHHTSSE-----EEEESCHHHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCC---------ccCCchHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence 34433333456788888888776522 222233444 4588888888762 45555555588888
Q ss_pred HHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC
Q 022564 129 YTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA 207 (295)
Q Consensus 129 ~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~ 207 (295)
+.++ +++||+|+++.+.|.++... +...|.++..+ +.+++++.+|++++++++++ ++++|++++ ..|
T Consensus 68 l~~l~~~~gd~Vi~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n-~~G 135 (373)
T 3frk_A 68 LKGYDIGFGDEVIVPSNTFIATALA--------VSYTGAKPIFV--EPDIRTYNIDPSLIESAITE-KTKAIIAVH-LYG 135 (373)
T ss_dssp HHHTTCCTTCEEEEETTSCTHHHHH--------HHHHSCEEEEE--CEETTTTEECGGGTGGGCCT-TEEEEEEEC-CTT
T ss_pred HHHcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--eccccccCcCHHHHHHhcCC-CCeEEEEEC-CCc
Confidence 8999 99999999999888886543 23556555444 45555788999999999987 888888532 236
Q ss_pred CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeC--CCCCCCC-CceEEEEEeCC
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 273 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s--~~K~l~g-p~gG~l~~~~~ 273 (295)
...|+++|.++|++||+++|+|++|+.|....+. ..+ ...|++++| .||++++ +.||+++++++
T Consensus 136 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~ 202 (373)
T 3frk_A 136 QPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM-KVG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDK 202 (373)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE-ETT-SSSSEEEEECCTTSSSCCSSSCEEEEESCH
T ss_pred CcccHHHHHHHHHHcCCEEEEECCcccCCEECCE-ecc-ccccEEEEeCcCCCccCccceeEEEEeCCH
Confidence 7899999999999999999999999988763221 111 126888888 5699977 56788888764
No 107
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.81 E-value=1.8e-20 Score=174.13 Aligned_cols=168 Identities=13% Similarity=0.118 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH--HHHHHHHhhcC--CCCeEEEecCCCCcccCccccccccccccce
Q 022564 90 IDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP--SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 90 ~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~--a~~~~~~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
..++++++++++++++|+++ .+++++|++ ++.+++.++.. +|+.|+++.++|+++.. .+...|
T Consensus 131 ~~~~~~~~~~~la~~~g~~~-----~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~--------~~~~~G 197 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNV-----HAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIK--------AVSFVG 197 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCC-----EEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH--------HHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCC-----CEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHH--------HHHHcC
Confidence 56788889999999999976 478888877 44435555433 77889999988877543 233456
Q ss_pred eeeEEEeee-cCCCCCCCCHHHHHHHH-hh---cCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccc---
Q 022564 166 IFFETMPYR-LNESTGYIDYDQLEKSA-TL---FRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISG--- 235 (295)
Q Consensus 166 ~~~~~v~~~-~~~~~~~id~e~l~~~i-~~---~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g--- 235 (295)
.++..+++. .+ +++.+|+++|++++ ++ .++.+|+++.+|+ |.+.|+++|+++|+++|+++++|+||+..
T Consensus 198 ~~~~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g 276 (456)
T 2z67_A 198 MNMRLVETVLDG-DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNY 276 (456)
T ss_dssp CEEEEECCEEET-TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred CCceEEEEeccC-CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHH
Confidence 666555532 13 56789999999999 42 3677777776644 58899999999999999999999886633
Q ss_pred ccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeC
Q 022564 236 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRK 272 (295)
Q Consensus 236 ~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~ 272 (295)
..+.+...... ++|++++|+|||+++|.| |++++++
T Consensus 277 ~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~ 313 (456)
T 2z67_A 277 YLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTD 313 (456)
T ss_dssp HHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEESC
T ss_pred hhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcC
Confidence 32322111110 399999999999889988 9999964
No 108
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.81 E-value=1.8e-20 Score=168.96 Aligned_cols=193 Identities=17% Similarity=0.180 Sum_probs=136.3
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (295)
+++..+.+..++++.+++.+.+...+ |.......+ +++.+++++|.+. .+++++|+.++..+
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~-----~~~~~sGt~al~~a 66 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVTE----LEDRLADFVGAKY-----CISCANGTDALQIV 66 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC---------ccCChHHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 44444444567888888888876532 122233444 4588888888762 45555555588878
Q ss_pred HHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC
Q 022564 129 YTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA 207 (295)
Q Consensus 129 ~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~ 207 (295)
+.++ +++||+|+++.+.|.++... +...|.++ +.++++++++.+|++++++++++ ++++|+.++ ..|
T Consensus 67 l~~~~~~~gd~Vi~~~~~~~~~~~~--------~~~~G~~~--~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G 134 (367)
T 3nyt_A 67 QMALGVGPGDEVITPGFTYVATAET--------VALLGAKP--VYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVS-LYG 134 (367)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHHH--------HHHTTCEE--EEECBCTTTCSBCGGGTGGGCCT-TEEEECCBC-GGG
T ss_pred HHHhCCCCcCEEEECCCccHHHHHH--------HHHcCCEE--EEEecCCccCCcCHHHHHHhcCc-CCcEEEeeC-Ccc
Confidence 8888 89999999999888776543 23456545 44456655689999999999976 888887432 126
Q ss_pred CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeC--CCCCCCC-CceEEEEEeCC
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKG 273 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s--~~K~l~g-p~gG~l~~~~~ 273 (295)
...++++|.++|++||+++|+|++|+.|....+.....+ .|++++| +||++++ +.||+++++++
T Consensus 135 ~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~--~di~~~Sf~~~K~l~~~g~gg~~~~~~~ 201 (367)
T 3nyt_A 135 QCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNL--STVACTSFFPSAPLGCYGDGGAIFTNDD 201 (367)
T ss_dssp CCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSS--SSEEEEECCTTSSSCCSSCCEEEEESCH
T ss_pred ChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCC--CCEEEEECCCCCcCCCcCceeEEEeCCH
Confidence 888999999999999999999999998876433211111 2888888 4899977 45688888643
No 109
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.81 E-value=3.9e-20 Score=165.07 Aligned_cols=203 Identities=19% Similarity=0.188 Sum_probs=134.0
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHH
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSN 125 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~ 125 (295)
+.|+|..+.+ ++++.+++++.+..... ..|+......+ +++.+++++|.+. .+++++|+.++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~~--------~~y~~~~~~~~----l~~~la~~~g~~~-----~~~~~~gt~a~ 66 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVGD--------DVYGEDPTINE----LERLAAETFGKEA-----ALFVPSGTMGN 66 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCCC--------GGGTCCHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCCC--------cccCCChHHHH----HHHHHHHHhCCce-----EEEecCcHHHH
Confidence 3577877766 46788888887653210 11333344444 4488888888753 56666666677
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh-----cCCcEEE
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-----FRPKLIV 200 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-----~~tk~i~ 200 (295)
..++.+++++||+|+++++.|.+.+.... .+...|.++ +++ .+ +++.+|++++++++++ .+|++|+
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~--~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 137 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGA-----MAVLSGVMP--HPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIA 137 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTH-----HHHHTCCEE--EEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEE
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccc-----hhhccCeEE--EEe-cC-CCCccCHHHHHHHhccccccccCceEEE
Confidence 77888889999999999977765433210 122345444 333 22 3567899999999974 1588998
Q ss_pred EcCCCC---CCcc---CHHHHHHHHHHcCCEEEEEccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCceEEEEEeC
Q 022564 201 AGASAY---ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 272 (295)
Q Consensus 201 l~~~n~---~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~ 272 (295)
++++|| |... ++++|.++|++||+++++|++|..+... .+....++ .++|.+++|+||++++|.||+++.++
T Consensus 138 ~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 138 IENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred EeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 875554 4444 4678899999999999999998654321 12211111 14788888999999888777777776
Q ss_pred Cch
Q 022564 273 GVK 275 (295)
Q Consensus 273 ~~~ 275 (295)
++.
T Consensus 218 ~~~ 220 (347)
T 1jg8_A 218 DFI 220 (347)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 110
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.81 E-value=3e-19 Score=165.05 Aligned_cols=162 Identities=15% Similarity=0.111 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
..+.+++.+++++|.+ + .+++++|+.++.+++.+++++||+|+++.+.|++....... .+...|.++..+
T Consensus 115 ~~~~l~~~lA~l~g~~-~----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~v~~v- 184 (445)
T 1qgn_A 115 TTVVLEEKISALEGAE-S----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----ILPKMGITATVI- 184 (445)
T ss_dssp HHHHHHHHHHHHHTCS-E----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHH----TGGGGTCEEEEE-
T ss_pred HHHHHHHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH----HHHHcCCEEEEe-
Confidence 3344668899999986 3 79999999888878899999999999999888876432110 122345444433
Q ss_pred eecCCCCCCCCHHHHHHHHhhcCC-cEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcc
Q 022564 173 YRLNESTGYIDYDQLEKSATLFRP-KLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~~t-k~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~ 249 (295)
+.+ |++++++++++ +| ++|+++.++| |.+.|+++|.++|++||+++++|++|+.+..... ... ++
T Consensus 185 -~~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-~~~---g~ 252 (445)
T 1qgn_A 185 -DPA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-LAL---GA 252 (445)
T ss_dssp -CSS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-TTT---TC
T ss_pred -CCC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-ccc---CC
Confidence 322 89999999987 88 9999985555 4888999999999999999999999987653211 112 59
Q ss_pred eEEEeCCCCCCCCCc---eEEEEEeCCchh
Q 022564 250 DVVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 250 D~~~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|++++|+||+++|+. +|++++++++.+
T Consensus 253 Div~~S~sK~~gg~gd~~~G~l~~~~~l~~ 282 (445)
T 1qgn_A 253 DLVLHSATKFLGGHNDVLAGCISGPLKLVS 282 (445)
T ss_dssp SEEEECTTTTTTCSSSCCCEEEEECHHHHH
T ss_pred EEEEECCcccccccccceEEEEEECHHHHH
Confidence 999999999998775 799999887644
No 111
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.81 E-value=3.3e-19 Score=161.68 Aligned_cols=208 Identities=11% Similarity=0.082 Sum_probs=143.8
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHH-HHHHHHHHHHHHcC--CCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM-AESLCQKRALEAFR--LDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~-l~~~~~~~la~~~g--~~~~~~~~~v~~~sG 121 (295)
+.|+|..+++ .+++.+.+++.+.+.+.. .+|+ .. ..+ +++++.+++.+.+| ++++ +|++++|
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~~--~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g 95 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGV-FGYS------RW--KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPS 95 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCC------CS--CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESC
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCC-CCCC------CC--ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCC
Confidence 5688877766 368999999998875421 1222 21 346 88888888888888 5555 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++.+++.+++++||+|+++.+.|.++.. .+...|.++..++++.+..++.+|++++++++++.++++|+
T Consensus 96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 167 (390)
T 1d2f_A 96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIML 167 (390)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEE
Confidence 99 8887889999999999999977766543 33345655555553322113468999999999754789998
Q ss_pred EcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccccCCCC--CCCC-c-ceEEEeCCCCCCC--CCceEEEE
Q 022564 201 AGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPFE-Y-ADVVTTTTHKSLR--GPRGAMIF 269 (295)
Q Consensus 201 l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~~-~-~D~~~~s~~K~l~--gp~gG~l~ 269 (295)
++.++|| ...+ +++|.++|++||+++|+|++|+.+........ ..+. . .|. +.|++|+++ |.+.|+++
T Consensus 168 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~ 246 (390)
T 1d2f_A 168 LCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGI 246 (390)
T ss_dssp EESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEE
Confidence 8755553 4444 88999999999999999999886543221110 0111 1 277 999999884 33349999
Q ss_pred Ee-CCchh
Q 022564 270 FR-KGVKE 276 (295)
Q Consensus 270 ~~-~~~~~ 276 (295)
++ +++.+
T Consensus 247 ~~~~~~~~ 254 (390)
T 1d2f_A 247 IENSSSRD 254 (390)
T ss_dssp ECSHHHHH
T ss_pred ECCHHHHH
Confidence 86 45543
No 112
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.81 E-value=1.6e-19 Score=166.67 Aligned_cols=222 Identities=11% Similarity=0.024 Sum_probs=146.8
Q ss_pred HcCc-eecCCCCCCCHHHHHHHhhhhhccCCC---CC--CC----CcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcc
Q 022564 46 WKGL-ELIPSENFTSVSVMQAVGSVMTNKYSE---GY--PG----ARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWG 113 (295)
Q Consensus 46 ~~~i-~L~~~~~~~~~~v~~al~~~l~~~~~~---g~--~~----~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~ 113 (295)
.+.| +|..+.+..++.+.+++.+++.+.+.. +. +. ...|+...+..++++++.+++.+.+|+ +++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--- 107 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE--- 107 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG---
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH---
Confidence 4678 998888877777666666655442211 00 11 123555566788888888888777765 554
Q ss_pred eeEEeCCChH-HHHHHHHhhcCCCC--------------eEEEe-cCCCCcccCccccccccccccceeeeEEEeeecCC
Q 022564 114 VNVQSLSGSP-SNFQVYTALLKPHD--------------RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE 177 (295)
Q Consensus 114 ~~v~~~sG~~-a~~~~~~al~~~gd--------------~Vl~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 177 (295)
+|++|+|++ ++..++.+++++|| +|+++ .+.|.++........ . +.+....+++++.+.
T Consensus 108 -~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~ 182 (444)
T 3if2_A 108 -NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQ--H--FAAVLPHIDEVTHDG 182 (444)
T ss_dssp -GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSC--C--EEECCCEEEEEEETT
T ss_pred -HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccc--h--hhccCceEEeccccc
Confidence 899999999 88878899999998 78876 777777654321100 1 122224445555553
Q ss_pred C----CCCCCHHHHHHH---HhhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEcccccccccc---CCC
Q 022564 178 S----TGYIDYDQLEKS---ATLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA---GVI 242 (295)
Q Consensus 178 ~----~~~id~e~l~~~---i~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~---~~~ 242 (295)
+ ++.+|+++|+++ +++ ++++|+++.++| |...+ +++|.++|++||+++|+|++|+...... +..
T Consensus 183 ~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 261 (444)
T 3if2_A 183 EEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAH 261 (444)
T ss_dssp EEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC
T ss_pred ccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccccc
Confidence 2 247899999988 454 889999875555 36666 8889999999999999999987432111 111
Q ss_pred CCCCCcceEEEeCCCCCCC-CCceEEEEEeCCchhh
Q 022564 243 PSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 243 ~~~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~ 277 (295)
. ...+.+++++|++|++. |.+.|+++.++++.+.
T Consensus 262 ~-~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~ 296 (444)
T 3if2_A 262 L-NWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEA 296 (444)
T ss_dssp C-CCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHH
T ss_pred c-cCCCCEEEEechhhccCCCCceEEEEECHHHHHH
Confidence 1 11247899999999632 2223999888776543
No 113
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.81 E-value=1.2e-19 Score=169.47 Aligned_cols=178 Identities=12% Similarity=-0.020 Sum_probs=130.2
Q ss_pred cCCcchHHHHHHHHHHHHHHHcCCCCCC------cceeEEeCCChH-HHHHHHHhhc-------------------CCCC
Q 022564 84 YGGNEYIDMAESLCQKRALEAFRLDPEK------WGVNVQSLSGSP-SNFQVYTALL-------------------KPHD 137 (295)
Q Consensus 84 ~~~~~~~~~l~~~~~~~la~~~g~~~~~------~~~~v~~~sG~~-a~~~~~~al~-------------------~~gd 137 (295)
|...+...++|+.+.+++++++|.+.+. + ...++++|++ +++.++.+.. .+++
T Consensus 105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~-~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGK-GGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSS-CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCC-CCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 4555778899999999999999997420 0 0466667777 7776655541 1457
Q ss_pred eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcC-----CcEEEEc-CCC-CCCcc
Q 022564 138 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFR-----PKLIVAG-ASA-YARLY 210 (295)
Q Consensus 138 ~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~-----tk~i~l~-~~n-~~~~~ 210 (295)
.|+++..+|.++... +.+.|.++..++ ++ +++ +|+++|++++++.+ +++|+++ .++ .|...
T Consensus 184 ~vi~s~~~H~s~~~~--------~~~~g~~~~~v~--~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~ 251 (475)
T 3k40_A 184 VGYCSDQAHSSVERA--------GLLGGVKLRSVQ--SE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFD 251 (475)
T ss_dssp EEEEETTSCHHHHHH--------HHHHTCEEEEEC--CB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred EEEECCCchHHHHHH--------HHHcCCceEEEE--CC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcC
Confidence 899999888877543 335665555554 55 467 99999999997521 5566665 333 37899
Q ss_pred CHHHHHHHHHHcCCEEEEEccccccccccCCCC---CCCCcceEEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 211 DYERIRKVCNKQKAIMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~---~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
|+++|+++|++||+++++|+||+.+.+...... .++..+|++++++||||++|.| |+++++++.
T Consensus 252 ~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~ 319 (475)
T 3k40_A 252 YLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPS 319 (475)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGG
T ss_pred CHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHH
Confidence 999999999999999999999988765432111 1222479999999999999999 999998763
No 114
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.81 E-value=1.3e-20 Score=173.16 Aligned_cols=208 Identities=15% Similarity=0.109 Sum_probs=144.0
Q ss_pred HcCceecCCCC----CCCHHHHHHHhhhhhccC--CCCCCCCcccCCcchHHHHHHHHHHHHHHHcC---CCCCCcceeE
Q 022564 46 WKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNV 116 (295)
Q Consensus 46 ~~~i~L~~~~~----~~~~~v~~al~~~l~~~~--~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~~~~~v 116 (295)
.+.|+|..+.+ .+++.+.+++.+.+.... ..+ |+...+..++++++.+++.+.+| ++++ +|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~------y~~~~g~~~lr~~la~~l~~~~g~~~~~~~----~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQ------YSTTEGDPVLKQQILKLLERMYGITGLDED----NL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTS------CCCTTCCHHHHHHHHHHHHHHHCCCSCCGG----GE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcC------CCCCCCCHHHHHHHHHHHHhccCCCCCCcc----cE
Confidence 46788876654 257889999988875410 012 23334557788777788877768 5554 79
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL-- 193 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~-- 193 (295)
++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .++ + .+|++++++++++
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~-~-~~d~~~l~~~l~~~~ 180 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN--------AFRQYLANFVVVP--LED-D-GMDLNVLERKLSEFD 180 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEE--EET-T-EECHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEEec--cCC-C-CCCHHHHHHHHHhhh
Confidence 9999998 8877888999999999999977666533 3334565554454 442 3 3899999999875
Q ss_pred -----cCCcEEE-EcCCCC--CCcc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC-----CcceEEEeCCC
Q 022564 194 -----FRPKLIV-AGASAY--ARLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTH 257 (295)
Q Consensus 194 -----~~tk~i~-l~~~n~--~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-----~~~D~~~~s~~ 257 (295)
.++++|+ ++.++| |... ++++|.++|++||+++|+|++|+.+...... ...+ .+.++++.|++
T Consensus 181 ~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~~i~~~s~s 259 (425)
T 1vp4_A 181 KNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGET-VDPIFKIGGPERVVLLNTFS 259 (425)
T ss_dssp HTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCC-CCCHHHHHCTTTEEEEEEST
T ss_pred hcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC-CcCHHHhCCCCCEEEEeccc
Confidence 3688885 565555 3444 4678999999999999999998765432211 1111 13678999999
Q ss_pred CCCC-CCceEEEEEeCCchh
Q 022564 258 KSLR-GPRGAMIFFRKGVKE 276 (295)
Q Consensus 258 K~l~-gp~gG~l~~~~~~~~ 276 (295)
|+|+ |.+.|++++++++.+
T Consensus 260 K~~~~G~r~G~~~~~~~~~~ 279 (425)
T 1vp4_A 260 KVLAPGLRIGMVAGSKEFIR 279 (425)
T ss_dssp TTTCGGGCEEEEECCHHHHH
T ss_pred cccccccceEEEeeCHHHHH
Confidence 9986 223499999877654
No 115
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.81 E-value=5.3e-19 Score=165.99 Aligned_cols=214 Identities=14% Similarity=0.079 Sum_probs=146.4
Q ss_pred HcCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~ 123 (295)
.+.+++..+....|+.+++++.+.+.... + .+...|+...+..++++++.+++.+.+|. +++ +|++|+|++
T Consensus 95 p~~i~~~~~~~~~p~~~~~~a~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~i~~t~G~~ 167 (500)
T 3tcm_A 95 PDLLQREEIKTLFSADSISRAKQILAMIP--G-RATGAYSHSQGIHGLRDAIASGIASRDGFPANAD----DIFLTDGAS 167 (500)
T ss_dssp GGGGGCTTHHHHSCHHHHHHHHHHHTTST--T-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGG----GEEEESSSH
T ss_pred cccccCCCCcccCCHHHHHHHHHHHHcCC--C-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcc----cEEEcCCHH
Confidence 45566655433457777777777665521 1 01223555667788998888888887774 554 799999999
Q ss_pred -HHHHHHHhhc-CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhc-----C
Q 022564 124 -SNFQVYTALL-KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF-----R 195 (295)
Q Consensus 124 -a~~~~~~al~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~-----~ 195 (295)
++..++.+++ ++||+|+++.+.|+++.. .+...|.++..++ ++. +++.+|+++|++++++. +
T Consensus 168 ~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~ 237 (500)
T 3tcm_A 168 PGVHLMMQLLIRNEKDGILVPIPQYPLYSA--------SIALHGGALVPYY--LNESTGWGLETSDVKKQLEDARSRGIN 237 (500)
T ss_dssp HHHHHHHHHHCCSTTEEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CBTTTTSBCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHHHHHHHhcCCC
Confidence 8877888887 899999999977766543 3445665554454 443 35699999999999753 6
Q ss_pred CcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCC-------C---C-cc-eEEEeCCCC
Q 022564 196 PKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP-------F---E-YA-DVVTTTTHK 258 (295)
Q Consensus 196 tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~-------~---~-~~-D~~~~s~~K 258 (295)
+++|+++.++|| .. .++++|+++|++||+++|+|++|.......+..... + . .. .+++.|++|
T Consensus 238 ~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK 317 (500)
T 3tcm_A 238 VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSK 317 (500)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSS
T ss_pred ceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCc
Confidence 888888755553 44 457788888999999999999987654432211111 0 1 11 366889999
Q ss_pred CCC---CCceEEEEE---eCCchh
Q 022564 259 SLR---GPRGAMIFF---RKGVKE 276 (295)
Q Consensus 259 ~l~---gp~gG~l~~---~~~~~~ 276 (295)
+|. |.++|++.+ ++++.+
T Consensus 318 ~~~g~~G~R~G~~~~~~~~~~~~~ 341 (500)
T 3tcm_A 318 GYYGECGKRGGYFEITGFSAPVRE 341 (500)
T ss_dssp TTTCCGGGCCEEEEEESCCTTHHH
T ss_pred cCCCCCccceEEEEEeCCCHHHHH
Confidence 984 556699988 666544
No 116
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.81 E-value=9.8e-20 Score=165.98 Aligned_cols=197 Identities=16% Similarity=0.103 Sum_probs=141.4
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~ 126 (295)
..++|..+++..++.+++++.+.+... . |....... .+++.+++++|.+. .+++++|+.++.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~---~------y~~~~~~~----~l~~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG---R------YLLGPELE----GFEAEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT---C------CSSSHHHH----HHHHHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC---C------CCCchhHH----HHHHHHHHHHCCCe-----EEEecCHHHHHH
Confidence 567887777766689999999887641 1 22223333 35588889998762 677777755888
Q ss_pred HHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 127 ~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
.++.++ +++||+|+++.+.|+++.. .+...|.++..++ .+++++.+|++++++++++ ++++|+++++
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~n~- 160 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGATPVPVE--PHEDHPTLDPLLVEKAITP-RTRALLPVHL- 160 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCSSSSSBCHHHHHHHCCT-TEEEECCBCG-
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCCEEEEEe--cCCCCCCcCHHHHHHhcCC-CCeEEEEeCC-
Confidence 788998 8999999999987777543 2234565554444 5534678999999999986 7888875422
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCCC-ceEEEEEe-CCch
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGP-RGAMIFFR-KGVK 275 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~gp-~gG~l~~~-~~~~ 275 (295)
.|...++++|.++|+++|+++|+|++|+.|....+ .... ...|++++|+| |++++| +||+++++ +++.
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~ 232 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRG-RRIG-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELA 232 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETT-EETT-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCccCC-eecc-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHH
Confidence 36788999999999999999999999987754322 1111 12699999995 998664 66888886 4543
No 117
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.81 E-value=2.9e-19 Score=159.63 Aligned_cols=203 Identities=16% Similarity=0.177 Sum_probs=139.5
Q ss_pred cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-H
Q 022564 47 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a 124 (295)
..|+|..+.. .+++++++++.+.+.. +. ..|+. ..+.+++++++++++| ... +|++++|++ +
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~~------~~~~~----~~~~~~l~~~la~~~g-~~~----~v~~~~~gt~a 71 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-QA------GPYGT----DELTAQVKRKFCEIFE-RDV----EVFLVPTGTAA 71 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-CC------CSTTC----SHHHHHHHHHHHHHHT-SCC----EEEEESCHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-cc------ccccc----chHHHHHHHHHHHHhC-CCC----cEEEeCCccHH
Confidence 4566765433 4689999999887532 11 11222 2344556789999999 432 688878877 8
Q ss_pred HHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccc--eeeeEEEeeecCCCCCCCCHHHHHH-HHhhc------C
Q 022564 125 NFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEK-SATLF------R 195 (295)
Q Consensus 125 ~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~id~e~l~~-~i~~~------~ 195 (295)
+..++.+++++||+|+++.+.|+++.... .+... |.++..+ +.+ ++.+|++++++ ++++. +
T Consensus 72 ~~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~v--~~~--~~~~d~~~l~~~~i~~~~~~~~~~ 141 (356)
T 1v72_A 72 NALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMTV--DGP--AAKLDIVRLRERTREKVGDVHTTQ 141 (356)
T ss_dssp HHHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEEC--CCG--GGCCCHHHHHHHTTSSTTCTTSCE
T ss_pred HHHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEEe--cCC--CCeEcHHHHHHHhhhcchhhccCC
Confidence 88788888999999999997776654320 02233 5444433 343 46899999999 88641 5
Q ss_pred CcEEEEcCCCC-CC---ccCHHHHHHHHHHcCCEEEEEcccccccc-ccCCCCCCC---CcceEEEeCCCCCCCCCce-E
Q 022564 196 PKLIVAGASAY-AR---LYDYERIRKVCNKQKAIMLADMAHISGLV-AAGVIPSPF---EYADVVTTTTHKSLRGPRG-A 266 (295)
Q Consensus 196 tk~i~l~~~n~-~~---~~~l~~I~~ia~~~~~~vivD~a~~~g~~-~~~~~~~~~---~~~D~~~~s~~K~l~gp~g-G 266 (295)
+++|+++++++ |. ..++++|.++|++||+++|+|++|+.+.. ..+.....+ .++|++++|+||+ ++|.| |
T Consensus 142 ~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g 220 (356)
T 1v72_A 142 PACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEA 220 (356)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEE
T ss_pred ceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccE
Confidence 78998875444 55 66788999999999999999999875432 112211111 1489999999999 67888 8
Q ss_pred EEEEeCCchh
Q 022564 267 MIFFRKGVKE 276 (295)
Q Consensus 267 ~l~~~~~~~~ 276 (295)
++++++++.+
T Consensus 221 ~~~~~~~~~~ 230 (356)
T 1v72_A 221 IVLFNTSLAT 230 (356)
T ss_dssp EEESSGGGHH
T ss_pred EEEECHHHHh
Confidence 9988887654
No 118
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.80 E-value=7e-21 Score=172.78 Aligned_cols=204 Identities=10% Similarity=0.052 Sum_probs=137.7
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCc---ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCCh
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~---~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~ 122 (295)
+...++++..++|++|+++|.+.+.+.+ +++.+. ...+ ....++.+.+|+.+++++|++.+. +|+| |+|+
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~-~~~~~~~~~ar~~la~ll~~~~~~---evif~t~~~ 100 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRG-KEFIQVAEEAEQDFRDLLNIPSNY---KVLFCHGGG 100 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC--------------------------CCHHHHHHHHHHHTCCTTE---EEEEEESCT
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCc
Confidence 4566778888999999999999886633 333221 1111 223345556889999999995422 6888 5677
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC-CCHHHHHHHHhhcCCcEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY-IDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-id~e~l~~~i~~~~tk~i~ 200 (295)
+ ++.+++.+++.+||+|++....+.++ ++.. .+...| .+..++++. .+.+. +|++++++++++ +|++|.
T Consensus 101 T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~----~a~~~G-~v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~ 171 (386)
T 3qm2_A 101 RGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIK----EAKKYC-APQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLH 171 (386)
T ss_dssp THHHHHHHHHHCTTCCEEEEEESSHHHH--HHHH----HHTTTS-EEEEEECEE-EETTEEEECCGGGCCCCT-TCSCEE
T ss_pred hHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHH----HHHHhC-CeEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEE
Confidence 7 87778899999999988766544444 2211 122345 566665431 01243 777888888876 899998
Q ss_pred EcCCCC--CCc-cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 201 AGASAY--ARL-YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~-~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++...+ |.. .|+++|. +|+++++|++|++|.++.++..+ |++++|+|||+ ||.| |++++|+++.+
T Consensus 172 ~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~~ 240 (386)
T 3qm2_A 172 YCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNI-GPAGLTLVIVREDLLG 240 (386)
T ss_dssp ECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTT-CCTTEEEEEEEGGGCS
T ss_pred EECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEeccccc-CCCccEEEEECHHHHh
Confidence 863333 664 7888875 79999999999999999888764 46789999999 7999 99999998754
No 119
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.80 E-value=4.4e-19 Score=160.56 Aligned_cols=190 Identities=16% Similarity=0.190 Sum_probs=134.7
Q ss_pred cCceecCCC--CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH
Q 022564 47 KGLELIPSE--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~--~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~ 123 (295)
+.+++..++ .++++++++++. . + + + ...+++.+++.+++++|++ ++ ++++++|++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~----~-~--~--------~---~~~~~~~~~~~~a~~~g~~~~~----~~~~~~ggt 86 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN----T-Y--I--------G---SSYFAEKVNEYGLKHLGGDEND----KCVGFNRTS 86 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT----S-T--T--------H---HHHHHHHHHHHHHHHHTCCTTE----EEEEESSHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH----H-h--c--------C---chHHHHHHHHHHHHHhCCCCcc----eEEEEcChH
Confidence 467777654 467899999986 1 2 1 1 1234556778888899984 23 667777777
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcE-EEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKL-IVA 201 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~-i~l 201 (295)
++..++.++ +||+|+++.+.|++++.... .+...|.++ +.+ .|+++++++ ++ ++++ |++
T Consensus 87 ~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~~~--~~v--------~d~~~l~~~-~~-~~~~~v~~ 147 (374)
T 2aeu_A 87 SAILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNAKY--FES--------DKVGEILNK-ID-KDTLVIIT 147 (374)
T ss_dssp HHHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTCEE--EEE--------SCHHHHHTT-CC-TTEEEEEE
T ss_pred HHHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCcEE--EEe--------CCHHHHHhc-CC-CccEEEEE
Confidence 888777777 99999999998888754222 222445433 332 388999888 54 8999 888
Q ss_pred cCCCCC---CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-cceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 202 GASAYA---RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 202 ~~~n~~---~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
+++||+ ...++++|.++|++||+++|+|++|+.+.........++. ++|++++|+||+++||++|++++++++.+.
T Consensus 148 ~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~ 227 (374)
T 2aeu_A 148 GSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDK 227 (374)
T ss_dssp CBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHH
T ss_pred ccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHH
Confidence 755553 5789999999999999999999998776420111110111 479999999999999988999999876543
No 120
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.80 E-value=5.9e-19 Score=159.02 Aligned_cols=204 Identities=13% Similarity=0.094 Sum_probs=142.6
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCC--CCCCcceeEEeCCC
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRL--DPEKWGVNVQSLSG 121 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG 121 (295)
++.|+|..+++. +++.+.+++.+.+.+.. .+|+ . .. .++++++.+++.+.+|. +++ +|++++|
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~-~~-~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 89 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQ------P-DG-SLLSQATAEFYADRYGYQARPE----WIFPIPD 89 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSC------C-SS-CCHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCC------C-CC-HHHHHHHHHHHHHHhCCCCCHH----HEEEeCC
Confidence 367899888773 68999999998886521 1222 2 22 45666677777777774 454 7999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+. + +|++++++++++ ++++++
T Consensus 90 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~-~--~d~~~l~~~l~~-~~~~v~ 155 (377)
T 3fdb_A 90 VVRGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFID--ATG-G--INLHDVEKGFQA-GARSIL 155 (377)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEEE--CTT-S--CCHHHHHHHHHT-TCCEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEcc--CCC-C--CCHHHHHHHhcc-CCCEEE
Confidence 99 8887889999999999999977776643 3335565554454 552 2 999999999987 799999
Q ss_pred EcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC-----cceEEEeCCCCCCCCC--ceEEE
Q 022564 201 AGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 201 l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~-----~~D~~~~s~~K~l~gp--~gG~l 268 (295)
++.++|+ ... ++++|.++|++||+++|+|++|+...........++. +.++++.|++|+++.| +.|++
T Consensus 156 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 235 (377)
T 3fdb_A 156 LCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQI 235 (377)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEE
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEE
Confidence 8855553 444 5778888899999999999998764432201111111 2458899999998433 34877
Q ss_pred EE-eCCchh
Q 022564 269 FF-RKGVKE 276 (295)
Q Consensus 269 ~~-~~~~~~ 276 (295)
++ ++++.+
T Consensus 236 ~~~~~~~~~ 244 (377)
T 3fdb_A 236 IFSNPSDAE 244 (377)
T ss_dssp ECCSHHHHH
T ss_pred EeCCHHHHH
Confidence 76 455544
No 121
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.80 E-value=1.2e-19 Score=163.51 Aligned_cols=192 Identities=11% Similarity=0.075 Sum_probs=139.2
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNF 126 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~ 126 (295)
..++|..+.+..++ +.+++.+.+.... |.......+ +++.++++++.+. .+++++|+.++.
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~----l~~~la~~~~~~~-----~~~~~~gt~a~~ 67 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTAD---------FTLGAELEK----FEKRFAALHNAPH-----AIGVGTGTDALA 67 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHTC---------CSSCHHHHH----HHHHHHHHTTCSE-----EEEESCHHHHHH
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcCC---------cccChhHHH----HHHHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 34677777777777 8899888776521 222233444 4588889998762 566666655888
Q ss_pred HHHHhh-cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 127 QVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 127 ~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
.++.++ +++||+|+++.+.|+++... +...|.++..++ .+ +++.+|++++++++++ ++++|+ .+|
T Consensus 68 ~~~~~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~--~~n 133 (374)
T 3uwc_A 68 MSFKMLNIGAGDEVITCANTFIASVGA--------IVQAGATPVLVD--SE-NGYVIDPEKIEAAITD-KTKAIM--PVH 133 (374)
T ss_dssp HHHHHTTCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEEC--BC-TTSSBCGGGTGGGCCT-TEEEEC--CBC
T ss_pred HHHHHcCCCCCCEEEECCCccHHHHHH--------HHHcCCEEEEEe--cC-CCCCcCHHHHHHhCCC-CceEEE--EeC
Confidence 788999 99999999999888776532 335565554444 55 5788999999999987 788887 333
Q ss_pred C-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCC-CceEEEEEeCC
Q 022564 206 Y-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRKG 273 (295)
Q Consensus 206 ~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~g-p~gG~l~~~~~ 273 (295)
+ |...++++|.++|++||+++|+|++|+.|...... ..+ ...|++++|+| |++++ +.||+++++++
T Consensus 134 ~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~-~~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~ 203 (374)
T 3uwc_A 134 YTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDK-FVG-SWGQFACFSLHPLKNLNVWSDAGVIITHSD 203 (374)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT-SSSSEEEEECSSSSSSCCSSCCEEEEESCH
T ss_pred CcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe-ecc-ccccEEEEeCCCCCcCCccceeEEEEeCCH
Confidence 3 57889999999999999999999999987653221 111 12699999977 99977 45688888764
No 122
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.80 E-value=4.9e-19 Score=162.59 Aligned_cols=192 Identities=13% Similarity=0.182 Sum_probs=138.7
Q ss_pred eecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCC-cchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HH
Q 022564 50 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SN 125 (295)
Q Consensus 50 ~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~ 125 (295)
+|..+++. +|+.+.+++.+.+...+ |+. .....++ ++.+++++|.+ ++++++|++ ++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~---------y~~~~~~~~~l----~~~la~~~~~~------~v~~~~ggt~al 80 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQW---------LSNGGPLVREF----EERVAGLAGVR------HAVATCNATAGL 80 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHTC---------CSSSCHHHHHH----HHHHHHHHTSS------EEEEESCHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcCC---------cccCCHHHHHH----HHHHHHHhCCC------eEEEeCCHHHHH
Confidence 46666664 46689999988876421 222 2344444 47788888863 688888888 88
Q ss_pred HHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCC
Q 022564 126 FQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASA 205 (295)
Q Consensus 126 ~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n 205 (295)
..++.++. +||+|+++.+.|.++.. .+...|.++..+ +++++++.+|++++++++++ ++++|++++ .
T Consensus 81 ~~~l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~ 147 (424)
T 2po3_A 81 QLLAHAAG-LTGEVIMPSMTFAATPH--------ALRWIGLTPVFA--DIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-L 147 (424)
T ss_dssp HHHHHHHT-CCSEEEEESSSCTHHHH--------HHHHTTCEEEEE--CBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-G
T ss_pred HHHHHHcC-CCCEEEECCCccHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-C
Confidence 87777764 78999999988877754 223556555444 45544678999999999976 889998864 2
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC--CCCCCCceEEEEEe-CCch
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFR-KGVK 275 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~--K~l~gp~gG~l~~~-~~~~ 275 (295)
.|...++++|.++|+++|+++|+|++|+.|....+. ... ...|++++|+| |+++++++|+++++ +++.
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~~~-~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~ 218 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR-PAG-SLGDAEVFSFHATKAVNAFEGGAVVTDDADLA 218 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT-SSSSEEEEECCTTSSSCCSSCEEEEESCHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe-ecc-cccCEEEEeCCCCCCccCCCCeEEEeCCHHHH
Confidence 467789999999999999999999999977654321 111 12578888877 99988778999998 4543
No 123
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.80 E-value=5.6e-19 Score=162.27 Aligned_cols=217 Identities=12% Similarity=0.080 Sum_probs=142.7
Q ss_pred cCceecCCCCCC-CHHHHHHHhhhhhccC-CCC---CCCCcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeEE
Q 022564 47 KGLELIPSENFT-SVSVMQAVGSVMTNKY-SEG---YPGARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNVQ 117 (295)
Q Consensus 47 ~~i~L~~~~~~~-~~~v~~al~~~l~~~~-~~g---~~~~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v~ 117 (295)
..|+|..++++. ++.+.+++.+...... .++ ......|+...+..++++++.+++.+.+| ++++ +|+
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~----~i~ 112 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE----RVV 112 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT----SCE
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh----hEE
Confidence 457888888864 5567777764321000 000 00001233334457788888888877777 5565 799
Q ss_pred eCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhh--
Q 022564 118 SLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATL-- 193 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~-- 193 (295)
+++|++ ++..++.+++++||+|+++.+.|+++.... ....|..+..++ .+. +++.+|++++++++++
T Consensus 113 ~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~-------~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~ 183 (428)
T 1iay_A 113 MAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDL-------RWRTGVQLIPIH--CESSNNFKITSKAVKEAYENAQ 183 (428)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHT-------TTTTCCEEEEEC--CCTTTTTCCCHHHHHHHHHHHH
T ss_pred EccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHH-------HHhcCCEEEEee--cCCccCCcCCHHHHHHHHHHHH
Confidence 999998 887788999999999999998887764211 113454454444 442 3457899999999864
Q ss_pred ---cCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCC--CCC-c-------ce--EEE
Q 022564 194 ---FRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPS--PFE-Y-------AD--VVT 253 (295)
Q Consensus 194 ---~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~--~~~-~-------~D--~~~ 253 (295)
.++++|+++.+|| |...+ +++|.++|++||+++|+|++|+.+......... .+. . .| +++
T Consensus 184 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~ 263 (428)
T 1iay_A 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263 (428)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEE
T ss_pred hcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEE
Confidence 2688888875555 46677 899999999999999999998764332111100 000 1 56 889
Q ss_pred eCCCCCCC--CCceEEEEE-eCCchh
Q 022564 254 TTTHKSLR--GPRGAMIFF-RKGVKE 276 (295)
Q Consensus 254 ~s~~K~l~--gp~gG~l~~-~~~~~~ 276 (295)
.|+||+|+ |.+.|++++ ++++.+
T Consensus 264 ~s~sK~~g~~Glr~G~~~~~~~~~~~ 289 (428)
T 1iay_A 264 YSLSKDMGLPGFRVGIIYSFNDDVVN 289 (428)
T ss_dssp EESTTTSSCGGGCEEEEEESCHHHHH
T ss_pred ecchhhcCCCCceEEEEEeCCHHHHH
Confidence 99999984 334499998 455543
No 124
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.80 E-value=7e-19 Score=162.61 Aligned_cols=206 Identities=12% Similarity=0.067 Sum_probs=137.5
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.|+|..+++ ++++.+.+++.+.+.+... ..+...|+...+..++++++.+++. +| ++++ +|++++|+
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~t~G~ 141 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLAT--REGYSGYGAEQGQGALREAVASTFY--GHAGRAAD----EIFISDGS 141 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGG--SCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGG----GEEEESCH
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhcc--ccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHH----HEEEccCH
Confidence 5799988877 3689999999988864210 1111234444556777766666654 34 4554 89999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee----------eEEEeeecCCCCCCCCHHHHHHHH
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLNESTGYIDYDQLEKSA 191 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~----------~~~v~~~~~~~~~~id~e~l~~~i 191 (295)
+ ++..+ .+++++||+|+++++.|.++.. .+...|.. +..++++.+ +++..|++++
T Consensus 142 ~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---- 207 (449)
T 3qgu_A 142 KCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPD-NHFFPDLSKA---- 207 (449)
T ss_dssp HHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGG-GTTCCCGGGC----
T ss_pred HHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccc-cCCcCChhHc----
Confidence 9 66644 8889999999999987777653 22344544 444543322 2445565432
Q ss_pred hhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccC----CCCCCC-CcceEEEeCCCCCCC
Q 022564 192 TLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG----VIPSPF-EYADVVTTTTHKSLR 261 (295)
Q Consensus 192 ~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~----~~~~~~-~~~D~~~~s~~K~l~ 261 (295)
.++++|+++.++|| ... ++++|+++|++||+++|+|++|+....... +...+. .+.++++.|++|+|+
T Consensus 208 --~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 285 (449)
T 3qgu_A 208 --KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAG 285 (449)
T ss_dssp --CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred --CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcC
Confidence 37999999855663 343 488899999999999999999886433221 111110 136799999999985
Q ss_pred --CCceEEEEEeCCchh
Q 022564 262 --GPRGAMIFFRKGVKE 276 (295)
Q Consensus 262 --gp~gG~l~~~~~~~~ 276 (295)
|.+.|++++++++.+
T Consensus 286 ~~G~r~G~~~~~~~~~~ 302 (449)
T 3qgu_A 286 FTGVRLGWTVVPKALKY 302 (449)
T ss_dssp CTTCCCEEEECCTTCBC
T ss_pred CccceeEEEecCHHHHh
Confidence 445599999988654
No 125
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.80 E-value=1e-18 Score=159.72 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=142.7
Q ss_pred cCceecCCCC------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH------cC--CCCCCc
Q 022564 47 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA------FR--LDPEKW 112 (295)
Q Consensus 47 ~~i~L~~~~~------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~------~g--~~~~~~ 112 (295)
+.|+|..+.+ ++++.+.+++.+.+.+....+ |+......++++++.+++.+. .| ++++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~-- 105 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNG------YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKD-- 105 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSS------CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCC------cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence 4688877752 468999999998876521112 333344567776666666532 22 4554
Q ss_pred ceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHH
Q 022564 113 GVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (295)
Q Consensus 113 ~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i 191 (295)
+|++++|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++++.+ +++.+|++++++++
T Consensus 106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l 174 (416)
T 1bw0_A 106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYNCRPE-NDWEADLDEIRRLK 174 (416)
T ss_dssp --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHHHC
T ss_pred --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEeecCcc-cCCCCCHHHHHHHh
Confidence 799999999 8887888999999999999987776543 23355655555553321 24679999999999
Q ss_pred hhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCC---CCCCC---C--cceEEEeCCCC
Q 022564 192 TLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGV---IPSPF---E--YADVVTTTTHK 258 (295)
Q Consensus 192 ~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~---~~~~~---~--~~D~~~~s~~K 258 (295)
++ ++++++++.++| |...+ +++|.++|++||+++|+|++|+........ ...++ . ..++++.|++|
T Consensus 175 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (416)
T 1bw0_A 175 DD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 253 (416)
T ss_dssp CT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred cc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchh
Confidence 76 788888875555 46666 899999999999999999998763322110 01111 1 13578899999
Q ss_pred CCCCC--ceEEEEEeCC
Q 022564 259 SLRGP--RGAMIFFRKG 273 (295)
Q Consensus 259 ~l~gp--~gG~l~~~~~ 273 (295)
+|+.| +.|+++++++
T Consensus 254 ~~~~~Glr~G~~~~~~~ 270 (416)
T 1bw0_A 254 NLVVPGWRLGWLLYVDP 270 (416)
T ss_dssp TTSCGGGCCEEEEEECT
T ss_pred hCCCCCceEEEEEeeCc
Confidence 97544 4599998874
No 126
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.80 E-value=1.4e-19 Score=162.54 Aligned_cols=205 Identities=9% Similarity=0.056 Sum_probs=139.5
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCC--CCcccCCcchHHHHHHHHHHHHHHHcCCCCCCccee-EEeCCChH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVN-VQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~--~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~-v~~~sG~~ 123 (295)
+.+++.++..++|+.+++++.+.+.+....+.. ...++ .....++.+++++.+++++|++++. + +++|+|++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~---~~i~~t~g~t 78 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR--GAVYEAVHNEAQARLLALLGNPTGY---KVLFIQGGAS 78 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT--SHHHHHHHHHHHHHHHHHTTCCSSE---EEEEESSHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC--cHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCCch
Confidence 356788888889999999999988652211110 00111 2334567778999999999997531 4 57888888
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
++..++.+++++||+|+++++.+.++. . ...+...| ++..++++.+. .+..+|.++++ +++ +||+|++
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~----~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~ 148 (362)
T 2c0r_A 79 TQFAMIPMNFLKEGQTANYVMTGSWASK--A----LKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHL 148 (362)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHH--H----HHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEecCcHhHH--H----HHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEE
Confidence 888889999999999998864333321 0 01233456 66666644211 12245776664 555 8999998
Q ss_pred cCCCC--CC-ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 202 GASAY--AR-LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 202 ~~~n~--~~-~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
+.++| |. ..|+++| +|+++++|++|+.|..+.++ ...|++++|+||++ ||.| |++++++++.+.
T Consensus 149 ~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~-----~~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~ 216 (362)
T 2c0r_A 149 TSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDL-----NQFGLVYAGAQKNL-GPSGVTVVIVREDLVAE 216 (362)
T ss_dssp ESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCG-----GGCSEEEEETTTTT-CCSSCEEEEEEGGGSSS
T ss_pred eCCcCccceeccccccc------CCCEEEEEChhhccCCccch-----hHCcEEEEeccccc-cCcCcEEEEEcHHHHhh
Confidence 75555 34 3567766 89999999999988665332 22589999999998 6888 999999987643
Q ss_pred h
Q 022564 278 N 278 (295)
Q Consensus 278 ~ 278 (295)
.
T Consensus 217 l 217 (362)
T 2c0r_A 217 S 217 (362)
T ss_dssp C
T ss_pred c
Confidence 3
No 127
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.80 E-value=1.3e-19 Score=166.15 Aligned_cols=160 Identities=13% Similarity=0.054 Sum_probs=120.3
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+++++.+++++|.+. .+++++|+.++.+++.+++++||+|+++.+.|++....+... +...|.++..+ +
T Consensus 85 ~~le~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~----l~~~G~~v~~v--~ 153 (415)
T 2fq6_A 85 FSLQQAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKI----LSKLGVTTSWF--D 153 (415)
T ss_dssp HHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHT----GGGGTCEEEEE--C
T ss_pred HHHHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCcEEEEE--C
Confidence 345588899999863 677777766888788999999999999999888876443211 12345444333 2
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHH--cCCEEEEEccccccccccCCCCCCCCcce
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNK--QKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~--~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (295)
. .|++++++++++ +||+|+++.++| |.+.|+++|+++|++ +|+++++|++|+.+.....+ .. ++|
T Consensus 154 ~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~---g~D 222 (415)
T 2fq6_A 154 P------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DF---GID 222 (415)
T ss_dssp T------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GG---TCS
T ss_pred C------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-cc---CCe
Confidence 2 278999999987 899999975555 488899999999999 99999999999866321111 11 599
Q ss_pred EEEeCCCCCCCCCc---eEEEEEeCCchh
Q 022564 251 VVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 251 ~~~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
++++|+||+++++. ||++++++++.+
T Consensus 223 iv~~S~sK~lg~~g~~~~G~l~~~~~~~~ 251 (415)
T 2fq6_A 223 VSIQAATKYLVGHSDAMIGTAVCNARCWE 251 (415)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECTTTHH
T ss_pred EEEEeCccccCCCCCceEEEEEeCHHHHH
Confidence 99999999998775 699999887644
No 128
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.80 E-value=5.3e-19 Score=162.65 Aligned_cols=239 Identities=11% Similarity=0.049 Sum_probs=149.2
Q ss_pred hccCcccccCH-HHHHHHHHHHHHH------HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHH
Q 022564 22 QLNAPLEVVDP-EIADIIEHEKARQ------WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (295)
Q Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~------~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~ 92 (295)
.+++.+..+++ +.+..+....... ++.|+|..+++. +++.+.+++.+.+.... .+ .+...|+......+
T Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~~~~~y~~~~g~~~ 102 (432)
T 3ei9_A 25 SRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELS-TI-EGYSGYGAEQGAKP 102 (432)
T ss_dssp CCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTT-ST-TTCCCCCCTTCCHH
T ss_pred ccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhccc-cc-CCccCCCCCCCCHH
Confidence 34455566665 3555443322221 156899888763 68999999999886421 10 11122444455678
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccc----cceee
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS----AVSIF 167 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~----~~g~~ 167 (295)
+++++.+++.+.++++++ +|++++|++ ++. ++.+++++||+|+++.+.|+++..........+.. .....
T Consensus 103 l~~~ia~~~~~~~~~~~~----~i~~t~G~~~al~-~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 177 (432)
T 3ei9_A 103 LRAAIAKTFYGGLGIGDD----DVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGN 177 (432)
T ss_dssp HHHHHHHHHHTTTTCCGG----GEEEESCHHHHHH-HHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETT
T ss_pred HHHHHHHHHHccCCCCcc----eEEECCChHHHHH-HHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCc
Confidence 887777777765677765 899999999 555 56888999999999998888775432211100000 00012
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccC--
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAG-- 240 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~-- 240 (295)
+..++++.+ +++..|+++ .+ ++++|+++.++|| ... ++++|+++|++||+++|+|++|+.+.....
T Consensus 178 ~~~~~~~~~-~~~~~~l~~-----~~-~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~ 250 (432)
T 3ei9_A 178 IEYMRCTPE-NGFFPDLST-----VG-RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR 250 (432)
T ss_dssp CEEEECCGG-GTTSCCGGG-----CC-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS
T ss_pred eEEeccCcc-cCCcCChhh-----CC-CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC
Confidence 444443221 234555443 23 7899999855664 443 577888889999999999999985533311
Q ss_pred -CCCCC-CCcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 241 -VIPSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 241 -~~~~~-~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
+.... ..+.++++.|++|+|+ |.+.|++++++++
T Consensus 251 ~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~ 288 (432)
T 3ei9_A 251 SIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKL 288 (432)
T ss_dssp SGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTC
T ss_pred ChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHH
Confidence 11110 1136799999999884 3444999998887
No 129
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.80 E-value=3.8e-19 Score=161.78 Aligned_cols=229 Identities=15% Similarity=0.111 Sum_probs=150.4
Q ss_pred cchhccCcccccCHHHHHHHHHHHHHHHcCceecCCCC----CCCHHHHHHHhhhhhccC--CCCCCCCcccCCcchHHH
Q 022564 19 WPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDM 92 (295)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~----~~~~~v~~al~~~l~~~~--~~g~~~~~~~~~~~~~~~ 92 (295)
++.+++++...+.+..+..+.... ...+.|+|..+.+ .+++.+.+++.+.+.+.. ..+| +......+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y------~~~~~~~~ 78 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQY------SPTEGYAP 78 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSC------CCTTCCHH
T ss_pred HHHHhhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCC------CCCCCCHH
Confidence 334455565566555544444422 2346788876643 257789999988775410 0122 22233345
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
++ +.+++++|++++ +|++++|++ ++..++.+++++||+|++..+.|+++.. .+...|.++..+
T Consensus 79 l~----~~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~ 142 (397)
T 2zyj_A 79 LR----AFVAEWIGVRPE----EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ--------AFRLQGPRFLTV 142 (397)
T ss_dssp HH----HHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEEEE
T ss_pred HH----HHHHHHhCCChh----hEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEec
Confidence 55 666777787765 899999999 8877888899999999999977766543 233456555445
Q ss_pred eeecCCCCCCCCHHHHHHHHhhcCCcEEE-EcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccCCCCCC
Q 022564 172 PYRLNESTGYIDYDQLEKSATLFRPKLIV-AGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSP 245 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~~tk~i~-l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~ 245 (295)
+ .+. + .+|++++++++++.++++|+ ++.++| |...+ +++|.++|++||+++|+|++|+.+...... ...
T Consensus 143 ~--~~~-~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~ 217 (397)
T 2zyj_A 143 P--AGE-E-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEAR-LPS 217 (397)
T ss_dssp E--EET-T-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCC-CCC
T ss_pred C--cCC-C-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCC-CCc
Confidence 4 442 3 38999999999765789885 455444 35555 558999999999999999998865432211 111
Q ss_pred CC--c------ceEEEeCCCCCCCCC--ceEEEEEeCCchh
Q 022564 246 FE--Y------ADVVTTTTHKSLRGP--RGAMIFFRKGVKE 276 (295)
Q Consensus 246 ~~--~------~D~~~~s~~K~l~gp--~gG~l~~~~~~~~ 276 (295)
+. + ..+++.|+||+|+ | +.|++++++++.+
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~ 257 (397)
T 2zyj_A 218 LFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQ 257 (397)
T ss_dssp HHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHH
T ss_pred hhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHH
Confidence 11 1 2388999999987 4 2399999877654
No 130
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.79 E-value=1.2e-18 Score=159.78 Aligned_cols=230 Identities=12% Similarity=0.069 Sum_probs=150.7
Q ss_pred cCcccccCHHHHHHHHHHHHHH--HcCceecCC---CC----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKARQ--WKGLELIPS---EN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 94 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~---~~----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~ 94 (295)
.+++..++++.+..+....... .+.|+|..| ++ ++++.+.+++.+.+.+....+ |+...+..+++
T Consensus 25 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr 98 (420)
T 4f4e_A 25 FSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRG------YLPIDGIAAYD 98 (420)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCC------CCCTTCCHHHH
T ss_pred hhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCC------CCCCCCcHHHH
Confidence 4566777776555555444332 367899888 33 234899999998886522112 33345567788
Q ss_pred HHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHH--HHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeE
Q 022564 95 SLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 169 (295)
Q Consensus 95 ~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~--~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 169 (295)
+++.+++....+. +++. ++|++|+|++ ++..+ +.+++++||+|+++++.|.++.. .+...|.++.
T Consensus 99 ~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~ 168 (420)
T 4f4e_A 99 ASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGFEVV 168 (420)
T ss_dssp HHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTCCEE
T ss_pred HHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCCeEE
Confidence 7777777554442 3431 2689999999 77766 45678999999999966665533 3445666665
Q ss_pred EEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCC
Q 022564 170 TMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVI 242 (295)
Q Consensus 170 ~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~ 242 (295)
.+++. +++++.+|++++++.+++ .++++++++.+||| .. .++++|+++|++||+++|+|+++.......+..
T Consensus 169 ~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~ 247 (420)
T 4f4e_A 169 AYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD 247 (420)
T ss_dssp EEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG
T ss_pred Eeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh
Confidence 55542 235688999999999973 26788888755553 33 457799999999999999999975433221000
Q ss_pred CC------CCCcceEEEeCCCCCCC--CCceEEEEE
Q 022564 243 PS------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 243 ~~------~~~~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
.. .....++++.|++|+|+ |.+-|++++
T Consensus 248 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 248 AAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred hHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 00 01136688999999885 333488865
No 131
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.79 E-value=5.3e-19 Score=161.15 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 92 MAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 92 ~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
...+++++++++++|.+ + .+++++|+.++..++.+++++||+|+++.+.|+++....... +...|.++..+
T Consensus 64 ~~~~~l~~~la~~~g~~-~----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~v 134 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGE-A----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHS----MPKFGINVRFV 134 (398)
T ss_dssp HHHHHHHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTH----HHHTTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCC-c----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHH----HHHcCCEEEEe
Confidence 34445668999999986 3 788888887888788899999999999998888775433110 12345444333
Q ss_pred eeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcc
Q 022564 172 PYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYA 249 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~ 249 (295)
+.+ |++++++++++ ++++|++++++| |...|+++|.++|++||+++|+|++|+.+...... .. ++
T Consensus 135 --~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~ 201 (398)
T 2rfv_A 135 --DAA------KPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPL-QL---GA 201 (398)
T ss_dssp --CTT------SHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TC
T ss_pred --CCC------CHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CC
Confidence 332 89999999987 899999985555 47889999999999999999999999877653211 12 48
Q ss_pred eEEEeCCCCCCCCCc---eEEEEEeCCchh
Q 022564 250 DVVTTTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 250 D~~~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
|+++.|+||+|++|. ||++++++++.+
T Consensus 202 di~~~s~sK~~~~~g~~~~G~~~~~~~~~~ 231 (398)
T 2rfv_A 202 DIVVHSVTKYINGHGDVIGGIIVGKQEFID 231 (398)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred cEEEEeCcccccCCCCceEEEEEECHHHHH
Confidence 999999999998775 499999887643
No 132
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.79 E-value=4.2e-18 Score=155.88 Aligned_cols=229 Identities=11% Similarity=0.073 Sum_probs=147.6
Q ss_pred cccCHHHHHHHHHHHHHH-----HcCceecCCCC-------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHH
Q 022564 28 EVVDPEIADIIEHEKARQ-----WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAES 95 (295)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~-----~~~i~L~~~~~-------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~ 95 (295)
...+..++.......+.. .+.|+|..|++ ++++.+.+++.+...... .+ |+...+..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~ 87 (418)
T 3rq1_A 15 KKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VG------YAPIAGIPDFLC 87 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HS------CCCTTCCHHHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CC------CCCCCChHHHHH
Confidence 445556666655543322 25689988842 468888888876543211 01 333345577887
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++.+++.+..+.+.. .+|++|+|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++
T Consensus 88 ~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~-- 154 (418)
T 3rq1_A 88 AAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGRTLVTYS-- 154 (418)
T ss_dssp HHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--
T ss_pred HHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCCEEEEEe--
Confidence 777877776665432 2799999999 8888899999999999999966655533 3445675554444
Q ss_pred cCCCCCCCCHHHHHHHHhhc---CCc-EEEEcCC-CC--CCccCHH---HHHHHHH------HcCCEEEEEccccccccc
Q 022564 175 LNESTGYIDYDQLEKSATLF---RPK-LIVAGAS-AY--ARLYDYE---RIRKVCN------KQKAIMLADMAHISGLVA 238 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~---~tk-~i~l~~~-n~--~~~~~l~---~I~~ia~------~~~~~vivD~a~~~g~~~ 238 (295)
++.+++.+|++++++++++. +++ +++++++ || |...+.+ +|+++|+ +||+++|+|++|.... .
T Consensus 155 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~-~ 233 (418)
T 3rq1_A 155 LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYS-G 233 (418)
T ss_dssp SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGS-S
T ss_pred eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccc-C
Confidence 54345789999999999752 666 6777755 55 3555554 5556666 8999999999974221 1
Q ss_pred cCC------CCCCCCcc---eEEEeCCCCCCC--CCceEEEEE---eCCchhh
Q 022564 239 AGV------IPSPFEYA---DVVTTTTHKSLR--GPRGAMIFF---RKGVKEI 277 (295)
Q Consensus 239 ~~~------~~~~~~~~---D~~~~s~~K~l~--gp~gG~l~~---~~~~~~~ 277 (295)
.+. ...+-..- .+++.|++|+++ |.+.|++++ ++++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~ 286 (418)
T 3rq1_A 234 EKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADE 286 (418)
T ss_dssp CHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHH
T ss_pred ChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHH
Confidence 110 00000002 277899999885 344499988 6665543
No 133
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.79 E-value=5.1e-19 Score=159.53 Aligned_cols=172 Identities=16% Similarity=0.158 Sum_probs=124.4
Q ss_pred chHHHHHHHHHHHHHHHc-CCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 88 EYIDMAESLCQKRALEAF-RLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~-g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
.+..+++ +.+++++ +++++ +|++++|++ ++..++.+++++||+|+++.+.|.++.. .+...|
T Consensus 63 ~g~~~l~----~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g 126 (375)
T 3op7_A 63 EGSPAFK----KSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLG 126 (375)
T ss_dssp TCCHHHH----HHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTT
T ss_pred CChHHHH----HHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcC
Confidence 4445555 6777776 46665 789999988 8888899999999999999977776543 233556
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccC---HHHHHHHHHHcCCEEEEEccccccccccC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (295)
.++..++++.+ +++.+|++++++++++ ++++|+++++++ |...+ +++|.++|++||+++|+|++|+..... .
T Consensus 127 ~~~~~v~~~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~ 203 (375)
T 3op7_A 127 AEVDLWQIEEE-NGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-D 203 (375)
T ss_dssp CEEEEEEEEGG-GTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-C
T ss_pred CEEEEEecccc-CCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-C
Confidence 55655554322 3567899999999987 899999985555 46777 999999999999999999998754332 1
Q ss_pred CCC-CCCCcceEEEeCCCCCCC--CCceEEEEEeCCchhhh
Q 022564 241 VIP-SPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEIN 278 (295)
Q Consensus 241 ~~~-~~~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~~~ 278 (295)
... ....+.++++.|++|+++ |.+.|++++++++.+..
T Consensus 204 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~ 244 (375)
T 3op7_A 204 VPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDIL 244 (375)
T ss_dssp CCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHH
T ss_pred CCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHH
Confidence 100 001135688999999985 33449999987766544
No 134
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.79 E-value=1.6e-18 Score=162.61 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=135.3
Q ss_pred CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-C--CCCCcceeEEeCCChH-HHHHHHHhhcC
Q 022564 59 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-L--DPEKWGVNVQSLSGSP-SNFQVYTALLK 134 (295)
Q Consensus 59 ~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~--~~~~~~~~v~~~sG~~-a~~~~~~al~~ 134 (295)
|..+.+++.+.+.+.. + .+...|+...+..++++++.+++.+..| + +++ +|++|+|++ ++..++.++++
T Consensus 103 P~~~~~~~~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~----~i~~t~G~~~ai~~~~~~l~~ 175 (498)
T 3ihj_A 103 PEDAKKRARRILQACG--G-NSLGSYSASQGVNCIREDVAAYITRRDGGVPADPD----NIYLTTGASDGISTILKILVS 175 (498)
T ss_dssp CHHHHHHHHHHHHHC-------------CCSCHHHHHHHHHHHHHHTTTCCCCGG----GEEEESSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcc----cEEEcCCHHHHHHHHHHHHcC
Confidence 5556666666665421 0 0112255556778899889999988875 4 554 899999999 88878888999
Q ss_pred CCC----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhc----CCcEEEEcCCC
Q 022564 135 PHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLF----RPKLIVAGASA 205 (295)
Q Consensus 135 ~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~----~tk~i~l~~~n 205 (295)
+|| +|+++.|.|+++.. .+...|..+..++ +++ +++.+|+++|++++++. ++++|+++++|
T Consensus 176 ~gd~~~d~Vlv~~p~y~~~~~--------~~~~~g~~~v~~~--~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~ 245 (498)
T 3ihj_A 176 GGGKSRTGVMIPIPQYPLYSA--------VISELDAIQVNYY--LDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPG 245 (498)
T ss_dssp CCGGGSEEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSC
T ss_pred CCCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--ccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCC
Confidence 875 99999977765543 3445665554444 443 35799999999999763 48899887666
Q ss_pred CC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCc------------c-eEEEeCCCCCCC---CCc
Q 022564 206 YA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEY------------A-DVVTTTTHKSLR---GPR 264 (295)
Q Consensus 206 ~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~------------~-D~~~~s~~K~l~---gp~ 264 (295)
|| .. .++++|+++|++||++||+|++|.......+....++.. . -+++.|++|+|. |.+
T Consensus 246 NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R 325 (498)
T 3ihj_A 246 NPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYR 325 (498)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSC
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccc
Confidence 64 34 457789999999999999999987654432211111110 1 267889999983 667
Q ss_pred eEEEEE---eCCchh
Q 022564 265 GAMIFF---RKGVKE 276 (295)
Q Consensus 265 gG~l~~---~~~~~~ 276 (295)
+|++.+ ++++.+
T Consensus 326 ~G~~~~~~~~~~l~~ 340 (498)
T 3ihj_A 326 GGYMEVINLHPEIKG 340 (498)
T ss_dssp CEEEEEESCCHHHHH
T ss_pred eEEEEEecCCHHHHH
Confidence 799884 444443
No 135
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.78 E-value=8.2e-19 Score=160.92 Aligned_cols=161 Identities=18% Similarity=0.194 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
..+++++++++++|.+. .+++++|+.++.+++.+++++||+|+++++.|+++...... .....|.++..+
T Consensus 82 ~~~~l~~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~~~~v- 151 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSE----ILPRWGVQTVFV- 151 (414)
T ss_dssp HHHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEE-
T ss_pred HHHHHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHH----HHHHcCcEEEEe-
Confidence 34446688999998753 56666665588878999999999999999888876443221 011245444333
Q ss_pred eecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcce
Q 022564 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (295)
+.+ |++++++++++ +|++|++++++| |...|+++|.++|++||+++|+|++|+.+.....+ .. ++|
T Consensus 152 -~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~d 219 (414)
T 3ndn_A 152 -DGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL---GVD 219 (414)
T ss_dssp -CTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG---TCS
T ss_pred -CCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc---CCC
Confidence 332 89999999987 899999985555 47889999999999999999999999876543222 12 489
Q ss_pred EEEeCCCCCCCCCc---eEEEEEeCCch
Q 022564 251 VVTTTTHKSLRGPR---GAMIFFRKGVK 275 (295)
Q Consensus 251 ~~~~s~~K~l~gp~---gG~l~~~~~~~ 275 (295)
+++.|++|+|+++. +|+++++++..
T Consensus 220 iv~~S~sK~l~~~G~~~~G~vv~~~~~~ 247 (414)
T 3ndn_A 220 VVVYSGTKHIDGQGRVLGGAILGDREYI 247 (414)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEECHHHH
T ss_pred eEeccCCccccCCCCceEEEEEECHHHH
Confidence 99999999997744 79999987644
No 136
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.78 E-value=3.8e-19 Score=161.12 Aligned_cols=175 Identities=7% Similarity=-0.001 Sum_probs=125.1
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccccee
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
....++.+++++.+++++|++ + .+++++|++ ++.+++ .++.+||+|+++++.|.+.. ... .+...|.
T Consensus 31 ~~~~~~~~~~~~~l~~~~~~~-~----~v~~~~sgt~a~~~~~-~~~~~gd~vi~~~~~~~~~~--~~~----~~~~~g~ 98 (379)
T 3ke3_A 31 KAFQEVMNDLLSNLKTVYNAE-A----AVIIPGSGTYGMEAVA-RQLTIDEDCLIIRNGWFSYR--WTQ----ILEKGKF 98 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS-E----EEEEESCHHHHHHHHH-HHHCTTCEEEEEECSHHHHH--HHH----HHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhCCC-C----EEEEcCChhHHHHHHH-HhCCCCCeEEEEeCCchhHH--HHH----HHHHhCC
Confidence 344577778899999999987 3 788887777 777555 45689999999997665531 110 1112232
Q ss_pred --eeEEEeeecCC-----CC-CCCCHHHHHHHHhhcCCcEEEEcCC-CC-CCccC---HHHHHHHHHHcCCEEEEEcccc
Q 022564 167 --FFETMPYRLNE-----ST-GYIDYDQLEKSATLFRPKLIVAGAS-AY-ARLYD---YERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 167 --~~~~v~~~~~~-----~~-~~id~e~l~~~i~~~~tk~i~l~~~-n~-~~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (295)
++..++.+... .. ..+|++++++++++.++++|+++.. |+ |...| +++|.++|++||+++|+|++|+
T Consensus 99 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 99 AKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp SSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 33334432110 01 2589999999996448999888633 33 57778 9999999999999999999998
Q ss_pred ccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 234 SGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 234 ~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
|..+.+.... ++|++++|+||+|+||.| |++++++++.+..
T Consensus 179 -g~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l 220 (379)
T 3ke3_A 179 -GCVWLDMKEL---GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKV 220 (379)
T ss_dssp -TTCCCCHHHH---TCSEEEECTTTTTCSCCCEEEEEECHHHHHHH
T ss_pred -CCcccccccc---CCCEEEecchhhcCCCCceEEEEECHHHHHhh
Confidence 7554443333 399999999999999988 9999998875544
No 137
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.78 E-value=2.9e-19 Score=160.77 Aligned_cols=201 Identities=10% Similarity=0.036 Sum_probs=139.1
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCC--cchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChH
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP 123 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~--~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~ 123 (295)
+.++++++..++|++|+++|.+.+.+.+ +++.+.+..+ .....++.+.+|+.+++++|++.+. +|+| |+|++
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~---~v~f~t~~~T 79 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY---EVLFLQGGAS 79 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCcHH
Confidence 5678999999999999999999887633 3333221111 1234567778999999999996432 7888 88888
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC--CCHHHHHHHHhhcCCcEEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY--IDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--id~e~l~~~i~~~~tk~i~ 200 (295)
++.+++.+++ +||++++....+.++ ++. ..+...|.++..++++. ++. +++++ + +++ +|++|.
T Consensus 80 ~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~----~~a~~~G~~v~~~~~~~---~g~~~~~~~~-~--l~~-~t~lv~ 145 (361)
T 3m5u_A 80 LQFAMIPMNLA-LNGVCEYANTGVWTK--KAI----KEAQILGVNVKTVASSE---ESNFDHIPRV-E--FSD-NADYAY 145 (361)
T ss_dssp HHHHHHHHHHC-CSSCEEEEECSHHHH--HHH----HHHHHTTCCEEEEEECT---TTTSCSCCCC-C--CCT-TSSEEE
T ss_pred HHHHHHHHhcC-CCCeEEEEeCCHHHH--HHH----HHHHHcCCceEEEeccc---CcCCCcCChh-h--cCC-CCCEEE
Confidence 8777888888 888764333222222 111 11223455566666432 232 45665 3 766 899998
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
++...+ |...|. +++ +|+++++|++|++|..+.++.. .|++++|+|||+ ||.| |++++++++.+.
T Consensus 146 ~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~~-----~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~ 213 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFSN-----IALFYGGVQKNA-GISGLSCIFIRKDMLER 213 (361)
T ss_dssp EESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCTT-----EEEEEEETTTTS-SCTTCEEEEEEHHHHHH
T ss_pred EeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCccc-----CCEEEEechhcc-CCCccEEEEEcHHHHhh
Confidence 863333 655451 444 4999999999999999988763 799999999999 7999 999999987654
Q ss_pred h
Q 022564 278 N 278 (295)
Q Consensus 278 ~ 278 (295)
.
T Consensus 214 ~ 214 (361)
T 3m5u_A 214 S 214 (361)
T ss_dssp H
T ss_pred h
Confidence 3
No 138
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.78 E-value=9.9e-20 Score=164.48 Aligned_cols=198 Identities=10% Similarity=-0.021 Sum_probs=139.9
Q ss_pred CCCCCCCHHHHHHHhhhhhccCCCCCCCCc---ccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChH-HHHH
Q 022564 53 PSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-SNFQ 127 (295)
Q Consensus 53 ~~~~~~~~~v~~al~~~l~~~~~~g~~~~~---~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~-a~~~ 127 (295)
++..+.|++|+++|.+.+.+.+ +++.+. +..+ ....++.+.+|+.+++++|++.+. +|+| ++|++ ++.+
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~-~~~~~~~~~ar~~la~ll~~~~~~---evif~t~~~T~a~n~ 92 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRS-SDFAKIINNTENLVRELLAVPDNY---KVIFLQGGGCGQFSA 92 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTS-HHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCC---eEEEEcCchHHHHHH
Confidence 4555789999999999887644 232221 1112 345567778999999999996532 7888 56777 7777
Q ss_pred HHHhhcCC--CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CC
Q 022564 128 VYTALLKP--HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-AS 204 (295)
Q Consensus 128 ~~~al~~~--gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~ 204 (295)
++.+++.+ ||+|++....+.++ ++. ..++..|..+..+ +.+ .++..++++++..+++ +|++|.++ ..
T Consensus 93 a~~~l~~~~~Gd~v~~~~~g~~~~--~~~----~~a~~~G~~~~~~--~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~e 162 (377)
T 3e77_A 93 VPLNLIGLKAGRCADYVVTGAWSA--KAA----EEAKKFGTINIVH--PKL-GSYTKIPDPSTWNLNP-DASYVYYCANE 162 (377)
T ss_dssp HHHHHGGGSTTCEEEECCCSHHHH--HHH----HHHTTTSEEEECS--CCC-SSSCSCCCGGGCCCCT-TCSCEEEESEE
T ss_pred HHHhccCCCCCCeEEEEECCHHHH--HHH----HHHHHhCCceEEe--ccC-CCcCCCCChHHhccCC-CccEEEEeCcc
Confidence 88888765 99998776555443 221 1222345333333 343 3345667777766766 89998886 22
Q ss_pred C-CCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchhh
Q 022564 205 A-YARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 277 (295)
Q Consensus 205 n-~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~~ 277 (295)
| .|...|+ +|+++|+++++|++|++|..+.++..++ ++++|+|||+ ||.| |++++|+++.+.
T Consensus 163 t~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~-----~~~~s~~K~~-gp~G~g~l~~~~~~l~~ 226 (377)
T 3e77_A 163 TVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG-----VIFAGAQKNV-GSAGVTVVIVRDDLLGF 226 (377)
T ss_dssp TTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS-----EEEEEGGGTT-SCTTCEEEEEETTSCSC
T ss_pred CchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC-----EEEEeccccc-CCCccEEEEEcHHHHhh
Confidence 2 3788887 5788999999999999999998877643 6899999999 7999 999999987643
No 139
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.78 E-value=6.6e-19 Score=161.87 Aligned_cols=244 Identities=13% Similarity=0.081 Sum_probs=152.3
Q ss_pred cchhccCcccccCHHHHHHHHHHHHHH-HcCceecCCCCCC--CHHHHHHHhhhhhccC----C-CCCCCCcccCCcchH
Q 022564 19 WPKQLNAPLEVVDPEIADIIEHEKARQ-WKGLELIPSENFT--SVSVMQAVGSVMTNKY----S-EGYPGARYYGGNEYI 90 (295)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~L~~~~~~~--~~~v~~al~~~l~~~~----~-~g~~~~~~~~~~~~~ 90 (295)
+++++++++..+.+..+..+.+..... .+.|+|..|.+.. .|. ..+...+.... . ........|+...+.
T Consensus 3 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~ 80 (425)
T 2r2n_A 3 YARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPF--KTAVITVENGKTIQFGEEMMKRALQYSPSAGI 80 (425)
T ss_dssp GGGGSCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSE--EEEEEEETTSCCEEECHHHHHHHTSCCCTTCC
T ss_pred hhHHHHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCH--HHHHHHHhhcccccccccchhhhcCCCCCCCC
Confidence 445566666667666666666544332 4678998887632 110 00000000000 0 000000013333455
Q ss_pred HHHHHHHHHHHHHHcCCCCCCc-----ceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccc
Q 022564 91 DMAESLCQKRALEAFRLDPEKW-----GVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~~~~~~-----~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
.++++++.+++++.+|.+.+.. ..+|++|+|++ ++..++.+++++||+|+++.+.|.++.. .+...
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~ 152 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ--------SLHPL 152 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHGGG
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHc
Confidence 6888888899998889864100 01899999999 8887899999999999999976665533 34456
Q ss_pred eeeeEEEeeecCCCCCCCCHHHHHHHHhh-----------cCCcEEEE-cCCCC--CCccC---HHHHHHHHHHcCCEEE
Q 022564 165 SIFFETMPYRLNESTGYIDYDQLEKSATL-----------FRPKLIVA-GASAY--ARLYD---YERIRKVCNKQKAIML 227 (295)
Q Consensus 165 g~~~~~v~~~~~~~~~~id~e~l~~~i~~-----------~~tk~i~l-~~~n~--~~~~~---l~~I~~ia~~~~~~vi 227 (295)
|.++..++ .+ + ..+|+++++++++. .++++|++ +.+|| |...+ +++|+++|++||++||
T Consensus 153 g~~~~~v~--~~-~-~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li 228 (425)
T 2r2n_A 153 GCNIINVA--SD-E-SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228 (425)
T ss_dssp TCEEEEEC--EE-T-TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeC--cC-C-CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 65555454 44 2 24899999999872 26888877 44555 35555 4599999999999999
Q ss_pred EEccccccccccC----CCCCCCCcceEEEeCCCCCCC-CCceEEEEEeCCchh
Q 022564 228 ADMAHISGLVAAG----VIPSPFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKE 276 (295)
Q Consensus 228 vD~a~~~g~~~~~----~~~~~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~ 276 (295)
+|++|+....... +......+.++++.|++|+|+ |.+.|++++++++.+
T Consensus 229 ~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~ 282 (425)
T 2r2n_A 229 EDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIE 282 (425)
T ss_dssp EECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHH
T ss_pred EECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHH
Confidence 9999874332211 111111135688999999985 223499999987654
No 140
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.78 E-value=2.5e-18 Score=158.62 Aligned_cols=189 Identities=17% Similarity=0.235 Sum_probs=136.0
Q ss_pred CCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhh-
Q 022564 54 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTAL- 132 (295)
Q Consensus 54 ~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al- 132 (295)
+.+..++++++++.+.+.+.+ ++.+ .... .+++.+++++|.+. .+++++|+.++..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~----~l~~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFND----AFEKKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHH----HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHH----HHHHHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 455678899999998876521 1211 2333 35588888899863 677777776887788887
Q ss_pred --------cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCC
Q 022564 133 --------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGAS 204 (295)
Q Consensus 133 --------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~ 204 (295)
+++||+|+++.++|+++..... ..|.++..+ +++++++.+|++++++++++ +|++|+++.
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~--------~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNPTI--------QNGLIPVFV--DVDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHHHH--------HTTCEEEEC--CEETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHHHH--------HcCCEEEEE--eccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 8899999999988888765332 456545444 45534688999999999986 899998863
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCC--CCCCCCCceEEEEEeCCc
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~--~K~l~gp~gG~l~~~~~~ 274 (295)
+++...++++|.++|+++|+++|+|++|+.|... +....+ ...|++++|+ .|.++|+.||+++++++.
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~ 236 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAG-TFGDIGTVSFYPAKHITMGEGGAVFTQSAE 236 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETT-SSSSEEEEECSTTSSSCCSSCEEEEESCHH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecc-cccCEEEEECcCCcCCCCCCeEEEEeCCHH
Confidence 2334589999999999999999999999988766 222111 1268876664 344677788999998663
No 141
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.78 E-value=9.2e-19 Score=159.64 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 93 AESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 93 l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
..+++++.+++++|.+ + .+++++|+.++..++.+++++||+|+++.+.|+++....... +...|.++..+
T Consensus 66 ~~~~l~~~la~~~g~~-~----~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~- 135 (398)
T 1gc0_A 66 TLNLLEARMASLEGGE-A----GLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHG----IGEFGVKLRHV- 135 (398)
T ss_dssp HHHHHHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHT----GGGGTCEEEEE-
T ss_pred HHHHHHHHHHHHhCCC-c----EEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEE-
Confidence 3344668889999986 3 788999977888788999999999999999998875543211 12345334333
Q ss_pred eecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcce
Q 022564 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (295)
+. .|++++++++++ ++++|+++.++| |...|+++|.++|++||+++|+|++|+.+...... .. ++|
T Consensus 136 -~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~---~~d 203 (398)
T 1gc0_A 136 -DM------ADLQALEAAMTP-ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-EL---GAD 203 (398)
T ss_dssp -CT------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GG---TCS
T ss_pred -CC------CCHHHHHHhcCC-CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---Cce
Confidence 22 389999999987 899999985555 47889999999999999999999999877654322 12 489
Q ss_pred EEEeCCCCCCCCCc---eEEEEEeCCch
Q 022564 251 VVTTTTHKSLRGPR---GAMIFFRKGVK 275 (295)
Q Consensus 251 ~~~~s~~K~l~gp~---gG~l~~~~~~~ 275 (295)
+++.|+||+|++|. ||+++++++..
T Consensus 204 ~~~~S~sK~~~~~~~~~~G~l~~~~~~~ 231 (398)
T 1gc0_A 204 LVVHSATKYLSGHGDITAGIVVGSQALV 231 (398)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECHHHH
T ss_pred EEEECCccccCCCCCCeEEEEEEChHHH
Confidence 99999999998876 59999987643
No 142
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.78 E-value=1.9e-18 Score=169.18 Aligned_cols=163 Identities=19% Similarity=0.139 Sum_probs=123.8
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
..++.+++++|.+. .+++++|++ ++.+++.+++++||+|+++.+.|.++... +...|+.+..++.
T Consensus 209 ~~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~--------~~~~G~~~v~v~~- 274 (755)
T 2vyc_A 209 ESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG--------LMLTGAKPVYMVP- 274 (755)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHHCCEEEEECC-
T ss_pred HHHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--------HHHcCCEEEEEeC-
Confidence 46688999999874 688999987 88889999999999999999888887653 2356766655543
Q ss_pred cCCCC----CCC-----CHHHHHHHHhhc-CCc--------EEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 175 LNEST----GYI-----DYDQLEKSATLF-RPK--------LIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 175 ~~~~~----~~i-----d~e~l~~~i~~~-~tk--------~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
+.++ +.+ |++++++++++. +++ +++++.+|+ |.+.|+++|+++|++||+++++|+||+.+
T Consensus 275 -~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 275 -SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp -CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred -CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 2222 235 999999999752 344 888876666 68899999999999999999999999765
Q ss_pred ccccCC--CCCCCCc--ceE------EEeCCCCCCCCCce-EEEEEeCC
Q 022564 236 LVAAGV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 236 ~~~~~~--~~~~~~~--~D~------~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
...... ...++.+ +|+ +++|+||+++||.+ |+++++++
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~ 402 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECC
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCc
Confidence 332221 1122234 565 99999999999985 89989876
No 143
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.78 E-value=3.8e-19 Score=157.76 Aligned_cols=159 Identities=13% Similarity=0.152 Sum_probs=121.7
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
+++.+++++|.+ + .+++++|+.++..++.+++++||+|+++.+.|+++....... +...|.++..+ +.
T Consensus 3 l~~~la~~~g~~-~----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----~~~~g~~~~~~--~~- 70 (331)
T 1pff_A 3 LEGKIAKLEHAE-A----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQ----LRKFGVEVDFI--DM- 70 (331)
T ss_dssp HHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTCEEEEE--CT-
T ss_pred HHHHHHHHhCCC-e----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHH----HHhcCCEEEEe--CC-
Confidence 568889999987 3 899999966888788888999999999998888875433210 11234334333 22
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHH-cCCEEEEEccccccccccCCCCCCCCcceEEE
Q 022564 177 ESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~-~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~ 253 (295)
.|++++++++++ ++++|+++.++| |...|+++|.++|++ +|+++|+|++|+.|...... .. ++|+++
T Consensus 71 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~~ 140 (331)
T 1pff_A 71 -----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIVV 140 (331)
T ss_dssp -----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred -----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 478899999876 899999975554 578899999999999 99999999999988754322 22 489999
Q ss_pred eCCCCCCCCCc---eEEEEEeC-Cchhh
Q 022564 254 TTTHKSLRGPR---GAMIFFRK-GVKEI 277 (295)
Q Consensus 254 ~s~~K~l~gp~---gG~l~~~~-~~~~~ 277 (295)
+|+||+|++|. +|++++++ ++.+.
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~~~~~~ 168 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRADIIAKV 168 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeCcHHHHHH
Confidence 99999998875 68999988 66543
No 144
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.78 E-value=2.2e-18 Score=156.36 Aligned_cols=160 Identities=19% Similarity=0.172 Sum_probs=121.0
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
..+++.++++++.+ + .|++++|+.++..++.+++++||+|+++.+.|++........ +...|.++..+ +
T Consensus 55 ~~l~~~la~~~~~~-~----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~--~ 123 (386)
T 1cs1_A 55 DVVQRALAELEGGA-G----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSL----AKRGCYRVLFV--D 123 (386)
T ss_dssp HHHHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHH----HTTTSCEEEEE--C
T ss_pred HHHHHHHHHHhCCC-c----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHH----HHhcCCEEEEe--C
Confidence 34568888888887 3 789999955888788888999999999999888754322111 12345434333 2
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
. .|++++++++++ ++++|+++++++ |...|+++|.++|++||+++|+|++|+.+...... .. ++|++
T Consensus 124 ~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~---~~di~ 192 (386)
T 1cs1_A 124 Q------GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL---GADLV 192 (386)
T ss_dssp T------TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG---TCSEE
T ss_pred C------CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc---CceEE
Confidence 2 289999999987 899999985555 47889999999999999999999999877553222 12 48999
Q ss_pred EeCCCCCCCCCce---EEEEEeC-Cchh
Q 022564 253 TTTTHKSLRGPRG---AMIFFRK-GVKE 276 (295)
Q Consensus 253 ~~s~~K~l~gp~g---G~l~~~~-~~~~ 276 (295)
++|+||++++|.+ |++++++ ++.+
T Consensus 193 ~~s~sK~~~~~~~~~~G~~~~~~~~l~~ 220 (386)
T 1cs1_A 193 LHSCTKYLNGHSDVVAGVVIAKDPDVVT 220 (386)
T ss_dssp EEETTTTTTCSSCCCCEEEEESSHHHHH
T ss_pred EEcCcccccCCCCceeEEEEeCcHHHHH
Confidence 9999999987764 9999987 5533
No 145
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.77 E-value=7.9e-19 Score=161.67 Aligned_cols=157 Identities=15% Similarity=0.080 Sum_probs=119.3
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
+++++.+++++|.+. .+++++|+.|+.+++.+++++||+|+++++.|++....... .+...|.++ +.++
T Consensus 85 ~~le~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~~--~~v~ 153 (430)
T 3ri6_A 85 EDLEQRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQK----TLPSFGIEV--RFVD 153 (430)
T ss_dssp HHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHT----HHHHTTCEE--EEEC
T ss_pred HHHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH----HHHHcCCEE--EEeC
Confidence 345588899999865 68888888788878899999999999999888776543211 122345444 3333
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
.+ |++++++++++ +|++|+++.++| |...|+++|+++|+++|+++|+|++++.+... ..... ++|++
T Consensus 154 ~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~~~---g~div 222 (430)
T 3ri6_A 154 VM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAKRL---GVDIE 222 (430)
T ss_dssp TT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGGGG---TCSEE
T ss_pred CC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChHHc---CCEEE
Confidence 32 89999999987 899999975555 47889999999999999999999999876552 11112 48999
Q ss_pred EeCCCCCCCCC---ceEEEEEeCC
Q 022564 253 TTTTHKSLRGP---RGAMIFFRKG 273 (295)
Q Consensus 253 ~~s~~K~l~gp---~gG~l~~~~~ 273 (295)
+.|++|+|+|| .||+++.+.+
T Consensus 223 ~~S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 223 VLSSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp EEECCCEEETTEEECCEEEEECSC
T ss_pred EECCcccccCCCCceEEEEEECCh
Confidence 99999999887 5688886544
No 146
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.77 E-value=4.6e-18 Score=156.59 Aligned_cols=214 Identities=11% Similarity=0.020 Sum_probs=140.3
Q ss_pred cCceecCCCCCC-CHHHHHHHhhhhhccCC--CCCCC---CcccCCcchHHHHHHHHHHHHHHHcC----CCCCCcceeE
Q 022564 47 KGLELIPSENFT-SVSVMQAVGSVMTNKYS--EGYPG---ARYYGGNEYIDMAESLCQKRALEAFR----LDPEKWGVNV 116 (295)
Q Consensus 47 ~~i~L~~~~~~~-~~~v~~al~~~l~~~~~--~g~~~---~~~~~~~~~~~~l~~~~~~~la~~~g----~~~~~~~~~v 116 (295)
..|+|..++++. .+.+.+++.+....... +|..+ -..|+...+..++++++.+++.+..+ ++++ +|
T Consensus 39 ~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~----~v 114 (435)
T 3piu_A 39 GIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN----HL 114 (435)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG----GE
T ss_pred CeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH----HE
Confidence 357888888764 55666666554332110 01000 02344455667888777777776655 4565 79
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccc-cceeeeEEEeeecCCCCCCCCHHHHHHHHhh-
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLNESTGYIDYDQLEKSATL- 193 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~- 193 (295)
++++|++ ++..++.+++++||.|++..+.|.++.. .+. ..|.++..++++.+ .++.+|++++++++++
T Consensus 115 ~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~ 185 (435)
T 3piu_A 115 VLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGVEIVPIHCTSS-NGFQITETALEEAYQEA 185 (435)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCCEEEEEECCGG-GTSCCCHHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCCEEEEeeCCCc-cCCcCCHHHHHHHHHHH
Confidence 9999999 8888899999999999999988776643 222 35655544543321 2467899999999975
Q ss_pred ----cCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC--------------Ccce
Q 022564 194 ----FRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF--------------EYAD 250 (295)
Q Consensus 194 ----~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~--------------~~~D 250 (295)
.++++|+++.++|| ... ++++|.++|++||+++|+|++|+.+........... ...+
T Consensus 186 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 265 (435)
T 3piu_A 186 EKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRV 265 (435)
T ss_dssp HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGE
T ss_pred HhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCE
Confidence 27888888755553 443 468888999999999999999976544322111000 1133
Q ss_pred EEEeCCCCCCC--CCceEEEEEeCC
Q 022564 251 VVTTTTHKSLR--GPRGAMIFFRKG 273 (295)
Q Consensus 251 ~~~~s~~K~l~--gp~gG~l~~~~~ 273 (295)
+++.|++|+|+ |.+.|+++++++
T Consensus 266 i~i~s~sK~~g~~G~r~G~~~~~~~ 290 (435)
T 3piu_A 266 HVVYSLSKDLGLPGFRVGAIYSNDD 290 (435)
T ss_dssp EEEEESSSSSCCGGGCEEEEEESCH
T ss_pred EEEEeeecccCCCceeEEEEEeCCH
Confidence 88999999984 334499998543
No 147
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.77 E-value=4.3e-18 Score=153.03 Aligned_cols=199 Identities=16% Similarity=0.095 Sum_probs=134.9
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|..+++. +++.+.+++.+.+.... +|+. ....++ ++.++++++++++ +|++++|++
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~l----~~~la~~~~~~~~----~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIE--RYPD-------ADYFHL----HQALARHHQVPAS----WILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGG--SCCC-------TTCHHH----HHHHHHHHTSCGG----GEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhh--cCCC-------CCHHHH----HHHHHHHHCcCHH----HEEECCCHHH
Confidence 57899888764 68999999988775411 2221 123344 4777888898775 899999999
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.++ +||+|++..+.|.++.. .+...|.++..++ .+. +++.+ ++++.+.+++ ++++++++
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-l~~~~~~~~~-~~~~v~i~ 153 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGCEIRRWS--LREADGWQL-TDAILEALTP-DLDCLFLC 153 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGGTTCC-CTTHHHHCCT-TCCEEEEE
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCCeEEEEe--CCcccccch-hHHHHHhccC-CCCEEEEe
Confidence 777677777 78999999977766543 2334565554454 432 23333 4656666654 78998887
Q ss_pred CCCC--CCccC---HHHHHHHHHHcCCEEEEEcccccccccc-CCCC-CCCCcceEEEeCCCCCCC--CCceEEEE-EeC
Q 022564 203 ASAY--ARLYD---YERIRKVCNKQKAIMLADMAHISGLVAA-GVIP-SPFEYADVVTTTTHKSLR--GPRGAMIF-FRK 272 (295)
Q Consensus 203 ~~n~--~~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~~-~~~~~~D~~~~s~~K~l~--gp~gG~l~-~~~ 272 (295)
.++| |...+ +++|.++|++||+++|+|++|+.+.... .... ....+.|+++.|+||+++ |.+.|+++ .++
T Consensus 154 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 233 (364)
T 1lc5_A 154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD 233 (364)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH
Confidence 5555 35666 8999999999999999999987554321 1100 011247899999999985 33449999 777
Q ss_pred Cchh
Q 022564 273 GVKE 276 (295)
Q Consensus 273 ~~~~ 276 (295)
++.+
T Consensus 234 ~~~~ 237 (364)
T 1lc5_A 234 AAMA 237 (364)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 148
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.77 E-value=1.7e-18 Score=158.31 Aligned_cols=157 Identities=18% Similarity=0.164 Sum_probs=119.0
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
.+++.+++++|.+ + .|++++|+.++..++. ++++||+|+++.+.|++++..... .+...|.++..+ +.
T Consensus 71 ~l~~~la~~~g~~-~----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~v~~v--~~ 138 (403)
T 3cog_A 71 CLEKAVAALDGAK-Y----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQ----VASEFGLKISFV--DC 138 (403)
T ss_dssp HHHHHHHHHHTCS-E----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHH----TGGGGTCEEEEE--CT
T ss_pred HHHHHHHHHhCCC-c----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHH----HHHHcCCEEEEE--CC
Confidence 3558888888886 3 8999999877777777 899999999999988876443221 112345444333 33
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcC-CEEEEEccccccccccCCCCCCCCcceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
+ |++++++++++ +|++|+++.++| |...|+++|+++|+++| +++++|++|+.+.....+. . ++|++
T Consensus 139 ~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~-~---~~div 207 (403)
T 3cog_A 139 S------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLA-L---GADIS 207 (403)
T ss_dssp T------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTT-T---TCSEE
T ss_pred C------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCccc-c---CCeEE
Confidence 2 89999999987 899999985555 47889999999999999 9999999998765422211 2 59999
Q ss_pred EeCCCCCCCCCc---eEEEEEeC-Cch
Q 022564 253 TTTTHKSLRGPR---GAMIFFRK-GVK 275 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~-~~~ 275 (295)
+.|+||+|+||. +|++++++ ++.
T Consensus 208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~ 234 (403)
T 3cog_A 208 MYSATKYMNGHSDVVMGLVSVNCESLH 234 (403)
T ss_dssp EEETTTTTTCSSCCCCEEEEECCHHHH
T ss_pred EEcChhhccCCCCCeEEEEEECcHHHH
Confidence 999999999886 49999864 543
No 149
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.77 E-value=2.5e-19 Score=165.94 Aligned_cols=162 Identities=16% Similarity=0.149 Sum_probs=117.8
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++++++ +|++ + ++++++|++ ++.+++.+++++||+|+++.+.|.++.... ...|..+..++.
T Consensus 60 ~~~~~~la~-~g~~-~----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~--------~~~G~~~~~v~~ 125 (446)
T 2x3l_A 60 LKSMKQVEK-HSDY-D----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHAL--------DISQQEGHFIET 125 (446)
T ss_dssp HHHHHHHCS-CTTE-E----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHH--------HHHTCCEEECEE
T ss_pred HHHHHHHHh-cCCC-c----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHH--------HHcCCeEEEEeC
Confidence 346689999 9987 3 799999998 888899999999999999998888775533 345655555553
Q ss_pred ecCCCC----CCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC-C
Q 022564 174 RLNEST----GYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF-E 247 (295)
Q Consensus 174 ~~~~~~----~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~-~ 247 (295)
..+ ++ +.+|++++ +.+ ++++|+++++|+ |...|+++|.++|++||+++|+|++|+......+. +... .
T Consensus 126 ~~~-~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~ 199 (446)
T 2x3l_A 126 HQS-PLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLN 199 (446)
T ss_dssp EEC-TTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGG
T ss_pred eec-cccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHH
Confidence 224 22 46788887 444 799999976665 68899999999999999999999999862211111 1111 1
Q ss_pred -cceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 248 -YADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 248 -~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
++|++++|+||+++|+.| |+++++++..+
T Consensus 200 ~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~ 230 (446)
T 2x3l_A 200 YQADYVVQSFHKTLPALTMGSVLYIHKNAPY 230 (446)
T ss_dssp GTCSEEEECHHHHSSSCTTCEEEEEETTCTT
T ss_pred cCCCEEEECCccccccccccEEEEEcCCcCC
Confidence 489999999999988877 99999988643
No 150
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.77 E-value=1.5e-18 Score=159.15 Aligned_cols=227 Identities=15% Similarity=0.062 Sum_probs=152.0
Q ss_pred CcccccCHHHHHHHHHHHHHHHcCceecCCCCC-----CCHHHHHHHh--hhhhccCCCCCCCCccc-CCcchHHHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVG--SVMTNKYSEGYPGARYY-GGNEYIDMAESL 96 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~-----~~~~v~~al~--~~l~~~~~~g~~~~~~~-~~~~~~~~l~~~ 96 (295)
..+.+++++++..+.+. ......|+|..|.+. +++.+.+++. +.+.+.. ....| +...+..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~-----~~~~Yp~~~~g~~~lr-- 76 (423)
T 3ez1_A 5 EASRPALDLARQAYEAF-KARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGL-----DLRNYPGGVAGLPSAR-- 76 (423)
T ss_dssp -CCHHHHHHHHHHHHHH-HHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTE-----ETTSSCSCTTCCHHHH--
T ss_pred HHHHHHHHHHHHHHHHh-hcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcch-----hhhCCCCCCCChHHHH--
Confidence 45667788888888775 344577999888765 4556777775 4433210 01123 3334445555
Q ss_pred HHHHHHHHcCCCCCCcceeEEeCCChH-HHH--HHHHhhcC--C---------CCeEEEecCCCCcccCccccccccccc
Q 022564 97 CQKRALEAFRLDPEKWGVNVQSLSGSP-SNF--QVYTALLK--P---------HDRIMALDLPHGGHLSHGYQTDTKKIS 162 (295)
Q Consensus 97 ~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~--~~~~al~~--~---------gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
+.++++++++++ +|++|+|++ ++. .++.+++. + ||+|+++.+.|.++.. .+.
T Consensus 77 --~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~ 142 (423)
T 3ez1_A 77 --ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQ 142 (423)
T ss_dssp --HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHH
T ss_pred --HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHH
Confidence 778888899886 899999999 765 68888887 8 5999999966655533 344
Q ss_pred cceeeeEEEeeecCCCCCCCCHHHHHHHHh-hcCCcEEEEc-CCCC--CCccCHH---HHHHHH-HHcCCEEEEEccccc
Q 022564 163 AVSIFFETMPYRLNESTGYIDYDQLEKSAT-LFRPKLIVAG-ASAY--ARLYDYE---RIRKVC-NKQKAIMLADMAHIS 234 (295)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~id~e~l~~~i~-~~~tk~i~l~-~~n~--~~~~~l~---~I~~ia-~~~~~~vivD~a~~~ 234 (295)
..|.++..++ .+. + .+|+++++++++ ..++++|++. .+|| |...+.+ +|+++| ++||+++|+|++|..
T Consensus 143 ~~g~~~~~v~--~~~-~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 143 TLGFELLTVD--MQS-D-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHTCEEEEEE--EET-T-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HcCCEEEecc--CCC-C-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 5665555554 442 2 499999999995 2378998764 4455 3555655 888888 899999999999875
Q ss_pred ccccc-CCCCC----------CCCcceEEEeCCCCCC-CCCceEEEEEeCCchhh
Q 022564 235 GLVAA-GVIPS----------PFEYADVVTTTTHKSL-RGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 235 g~~~~-~~~~~----------~~~~~D~~~~s~~K~l-~gp~gG~l~~~~~~~~~ 277 (295)
..+.. +.... ...+.++++.|++|++ +|.+.|+++.++++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~ 273 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRW 273 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHH
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHH
Confidence 43332 11110 0123679999999964 45555999998876543
No 151
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.77 E-value=1e-17 Score=153.38 Aligned_cols=156 Identities=13% Similarity=0.125 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
.+++++++++++|.+ ++++++|++ ++..++.+++++||+|+++.+.|+++..++... +...|.++..+
T Consensus 58 ~~~l~~~la~~~g~~------~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~~- 126 (412)
T 2cb1_A 58 AKALEERLKALEGAL------EAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQV----LSLMGVTVRYV- 126 (412)
T ss_dssp HHHHHHHHHHHHTCS------EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHT----TTTTTCEEEEE-
T ss_pred HHHHHHHHHHHhCCC------cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEE-
Confidence 334568889999875 455556666 888888899999999999999888765433211 12345434333
Q ss_pred eecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcce
Q 022564 173 YRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D 250 (295)
+. |++++++++++ +|++|+++.++| |...|+++|.++|++||+++|+|++|+.+......... ++|
T Consensus 127 -~~-------~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~d 194 (412)
T 2cb1_A 127 -DP-------EPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW---GAH 194 (412)
T ss_dssp -CS-------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG---TCS
T ss_pred -CC-------CHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc---CCe
Confidence 22 48999999987 899999975544 47889999999999999999999999877222111111 489
Q ss_pred EEEeCCCCCCCCCce--EEEEEeC
Q 022564 251 VVTTTTHKSLRGPRG--AMIFFRK 272 (295)
Q Consensus 251 ~~~~s~~K~l~gp~g--G~l~~~~ 272 (295)
++++|+||++++|.+ |++++.+
T Consensus 195 i~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 195 VVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEEC
T ss_pred EEEECCcccccCCCCcEEEEEEec
Confidence 999999999988754 5555444
No 152
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.77 E-value=1.5e-19 Score=161.87 Aligned_cols=199 Identities=10% Similarity=0.090 Sum_probs=137.5
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCC---cchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCCh
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~ 122 (295)
..++++++...+|+.+++++.+.+.+ + .+++...|.. .....++.+++++++++++|++ ++ +|++++|+
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~----~v~~~~g~ 75 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY----QILFLQGG 75 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE----EEEEESSH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc----eEEEECCc
Confidence 35778888888999999999998764 2 1222211211 2344566777889999999996 33 89999998
Q ss_pred -H-HHHHHHHhhcCC---CCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHH-HHhhcCC
Q 022564 123 -P-SNFQVYTALLKP---HDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK-SATLFRP 196 (295)
Q Consensus 123 -~-a~~~~~~al~~~---gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~-~i~~~~t 196 (295)
+ ++.+++.+++.+ ||.|+++.+.|.+. . .+...| ++..++ ++++++.+|++++++ ++++ +|
T Consensus 76 gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~--------~-~~~~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~ 142 (360)
T 1w23_A 76 ASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL--------K-EAKLLG-ETHIAA--STKANSYQSIPDFSEFQLNE-ND 142 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH--------H-HHHTTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TE
T ss_pred chHHHHHHHHHhcCCCCcccEEEecchhHHHH--------H-HHHHhC-CeEEee--cccccCcCCccchHhhccCC-CC
Confidence 7 888788888765 56666655333221 0 123446 665555 442245689999988 8865 89
Q ss_pred cEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 197 KLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 197 k~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
|+|+++.++| |...+ +|+++||+++|+|++|+.+..+.++. ..|++++|+||+++ |.| |+++++++
T Consensus 143 k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~-----~~di~~~s~sK~~~-~~G~G~~~~~~~ 211 (360)
T 1w23_A 143 AYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKVN-----QFGMIYAGAQKNLG-PSGVTVVIVKKD 211 (360)
T ss_dssp EEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCGG-----GCSEEEEETTTTTS-CTTCEEEEEEHH
T ss_pred CEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCcc-----cCCEEEEEcccccC-CCCcEEEEEcHH
Confidence 9999985554 34445 33448999999999998876543321 24899999999885 778 99999987
Q ss_pred chh
Q 022564 274 VKE 276 (295)
Q Consensus 274 ~~~ 276 (295)
+.+
T Consensus 212 ~~~ 214 (360)
T 1w23_A 212 LLN 214 (360)
T ss_dssp HHC
T ss_pred HHh
Confidence 654
No 153
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.77 E-value=3.1e-18 Score=155.99 Aligned_cols=160 Identities=18% Similarity=0.179 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.+.+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|+++....... ....|..+..+
T Consensus 68 ~~~l~~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~----~~~~g~~~~~v-- 136 (392)
T 3qhx_A 68 RTALEAALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKV----FTGWNVEYTPV-- 136 (392)
T ss_dssp HHHHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHT----GGGGTCEEEEE--
T ss_pred HHHHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHH----HHhcCcEEEEe--
Confidence 3446689999999863 566666666888788889999999999999888765433111 12345434333
Q ss_pred ecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceE
Q 022564 174 RLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADV 251 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (295)
+.+ |++++++++++ ++++|+++.++| |...|+++|.++|++||+++|+|++|+.+... ..... ++|+
T Consensus 137 ~~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~~~---~~di 205 (392)
T 3qhx_A 137 ALA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPLSL---GADV 205 (392)
T ss_dssp CTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGGGG---TCSE
T ss_pred CCC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChHHh---CCcE
Confidence 332 89999999987 899999975555 47889999999999999999999998755322 11112 4899
Q ss_pred EEeCCCCCCCCCc---eEEEEEeC-Cch
Q 022564 252 VTTTTHKSLRGPR---GAMIFFRK-GVK 275 (295)
Q Consensus 252 ~~~s~~K~l~gp~---gG~l~~~~-~~~ 275 (295)
++.|+||+++++. +|+++.++ ++.
T Consensus 206 ~~~S~sK~lg~~g~~~~G~v~~~~~~~~ 233 (392)
T 3qhx_A 206 VLHSTTKYIGGHSDVVGGALVTNDEELD 233 (392)
T ss_dssp EEEETTTTTTCSSCCCCEEEEESCHHHH
T ss_pred EEEcCccccCCCCCceEEEEEECcHHHH
Confidence 9999999998754 69999885 443
No 154
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.77 E-value=4.3e-18 Score=155.57 Aligned_cols=227 Identities=12% Similarity=0.048 Sum_probs=144.2
Q ss_pred cCHHHHHHHHHHHHHH-----HcCceecCCCC-------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 30 VDPEIADIIEHEKARQ-----WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 30 ~~~~~~~~~~~~~~~~-----~~~i~L~~~~~-------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
.+..++..+....+.. .+.|+|..|+. .+++.+.+++.+...... .+ |+...+..++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~l 88 (413)
T 3t18_A 16 GPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHI-AS------YAPIEGEKDYRKIV 88 (413)
T ss_dssp CCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHH-HS------CCCTTCCHHHHHHH
T ss_pred CCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccc-cC------cCCCCCCHHHHHHH
Confidence 4445555554432221 25789987753 367888888876432210 01 23334557788777
Q ss_pred HHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC
Q 022564 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN 176 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 176 (295)
.+++.+..+.+.. .+|++|+|++ ++..++.+++++||+|+++.+.|+++.. .+...|.++..++ +.
T Consensus 89 a~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~ 155 (413)
T 3t18_A 89 IDTLFGPYKPEGY---ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGRNFKTFE--FF 155 (413)
T ss_dssp HHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTCEEEEEC--CB
T ss_pred HHHHhcccCcccc---CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCCeEEEee--cc
Confidence 7877766654321 2799999999 8888899999999999999966655532 3446675554454 43
Q ss_pred CCCCCCCHHHHHHHHhhc---CCc-EEEEcCC-CC--CCccCHH---HHHHHHH------HcCCEEEEEccccccccccC
Q 022564 177 ESTGYIDYDQLEKSATLF---RPK-LIVAGAS-AY--ARLYDYE---RIRKVCN------KQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 177 ~~~~~id~e~l~~~i~~~---~tk-~i~l~~~-n~--~~~~~l~---~I~~ia~------~~~~~vivD~a~~~g~~~~~ 240 (295)
.+++.+|++++++++++. +++ +++++++ || |...+.+ +|+++|+ +||+++|+|++|.. ....+
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~-~~~~~ 234 (413)
T 3t18_A 156 TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLE-FAGDG 234 (413)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGG-GSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccccc-ccCCh
Confidence 345789999999999752 677 6777755 45 3556655 5556666 89999999999742 22222
Q ss_pred CCCCCC----Cc--c---eEEEeCCCCCCCCC--ceEEEEE---eCCchhh
Q 022564 241 VIPSPF----EY--A---DVVTTTTHKSLRGP--RGAMIFF---RKGVKEI 277 (295)
Q Consensus 241 ~~~~~~----~~--~---D~~~~s~~K~l~gp--~gG~l~~---~~~~~~~ 277 (295)
....++ .. . .+++.|++|+|+.| +.|++++ ++++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~ 285 (413)
T 3t18_A 235 DQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEE 285 (413)
T ss_dssp STTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHH
T ss_pred hhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHH
Confidence 111110 00 1 27789999988533 3399988 6665543
No 155
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.77 E-value=1.6e-18 Score=158.48 Aligned_cols=159 Identities=16% Similarity=0.158 Sum_probs=120.4
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
++++.+++++|.+ + .+++++|+.++..++.+++++||+|+++.+.|+++..++.. .+...|.++..+ +.
T Consensus 66 ~l~~~ia~~~g~~-~----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~~~~v--~~ 134 (404)
T 1e5e_A 66 NLEGKIAFLEKTE-A----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEH----ALTKFGIQVDFI--NT 134 (404)
T ss_dssp HHHHHHHHHHTCS-E----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCEEEEE--CT
T ss_pred HHHHHHHHHhCCC-c----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCEEEEE--CC
Confidence 3558888888886 2 67777776688878889999999999999888876553221 122455444333 33
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHH-cCCEEEEEccccccccccCCCCCCCCcceEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNK-QKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~-~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
+ |++++++++++ +|++|++++++| |...|+++|+++|++ +|+++|+|++|+.+...... .. ++|++
T Consensus 135 ~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~---~~di~ 203 (404)
T 1e5e_A 135 A------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DF---GVDVV 203 (404)
T ss_dssp T------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GG---TCSEE
T ss_pred C------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-cc---CCEEE
Confidence 2 78999999987 899999985555 478899999999999 99999999999876542111 11 48999
Q ss_pred EeCCCCCCCCCc---eEEEEEeCCchh
Q 022564 253 TTTTHKSLRGPR---GAMIFFRKGVKE 276 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~~~~~ 276 (295)
+.|+||+|++|. +|+++++++..+
T Consensus 204 ~~S~sK~~~~~g~ri~G~~~~~~~~~~ 230 (404)
T 1e5e_A 204 VHSATKYINGHTDVVAGLICGKADLLQ 230 (404)
T ss_dssp EEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred EEcCccccCCCCCCeEEEEEECHHHHH
Confidence 999999998876 499999987654
No 156
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.76 E-value=8.3e-18 Score=153.00 Aligned_cols=223 Identities=14% Similarity=0.077 Sum_probs=141.4
Q ss_pred cccCH-HHHHHHHHHHHHH-HcCceecCCCC--C-----CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHH
Q 022564 28 EVVDP-EIADIIEHEKARQ-WKGLELIPSEN--F-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 98 (295)
Q Consensus 28 ~~~~~-~~~~~~~~~~~~~-~~~i~L~~~~~--~-----~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 98 (295)
+..++ .++.......... .+.|+|..|.. . +.+.+.+++.+.+.+....+ |....+..++++++.
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia 81 (401)
T 7aat_A 8 EMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKE------YLPIAGLADFTRASA 81 (401)
T ss_dssp CCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCC------CCCTTCCHHHHHHHH
T ss_pred CCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccC------CCCCCCCHHHHHHHH
Confidence 33444 3444444432222 24688887763 1 23468888877665311112 333345677887777
Q ss_pred HHHHHHcCC--CCCCcceeEEe--CCChH-HHHHHHHhh---cCCCCeEEEecCCCCcccCccccccccccccceeeeEE
Q 022564 99 KRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQVYTAL---LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 170 (295)
Q Consensus 99 ~~la~~~g~--~~~~~~~~v~~--~sG~~-a~~~~~~al---~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (295)
+++.+.+|. +++ +|++ |+|++ ++..++.++ +++||+|++++|.|.++.. .+...|.++..
T Consensus 82 ~~~~~~~~~~~~~~----~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~~ 149 (401)
T 7aat_A 82 ELALGENSEAFKSG----RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQLQA 149 (401)
T ss_dssp HHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCEEEE
T ss_pred HHhcCCCccccccC----ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCeeEe
Confidence 777766664 355 6766 89998 777565554 4899999999977766643 33355655555
Q ss_pred EeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEccccccccccCC--
Q 022564 171 MPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV-- 241 (295)
Q Consensus 171 v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-- 241 (295)
+++. +.+++.+|++++++.+++ .++++++++.+||| ...++++|+++|++||+++|+|++|...... +.
T Consensus 150 ~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~-~~~~ 227 (401)
T 7aat_A 150 YRYY-DPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASG-DINR 227 (401)
T ss_dssp EECE-ETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTS-CHHH
T ss_pred eeee-ccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCC-Cccc
Confidence 5543 224678999988888763 36788888866664 3456889999999999999999997533221 10
Q ss_pred CCC------CCCcceEEEeCCCCCCC--CCceEEEEE
Q 022564 242 IPS------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 242 ~~~------~~~~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
... ......+++.|++|+|+ |.+-|++++
T Consensus 228 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~ 264 (401)
T 7aat_A 228 DAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV 264 (401)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred cHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence 000 00125588999999874 333488886
No 157
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.76 E-value=9e-18 Score=150.35 Aligned_cols=199 Identities=13% Similarity=0.062 Sum_probs=135.6
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
++.|+|..++++ +++.+.+++.+.+.+.. +|+. ....+ +++.++++++++++ +|++|+|++
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~----l~~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPD-------VNYRR----LNKSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCC-------TTCHH----HHHHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCC-------ccHHH----HHHHHHHHhCCCcc----eEEEcCCHH
Confidence 467999988774 58999999988876522 2322 12233 45788888898876 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.++ |+|+++.+.|.++.. .+...|.++..++ .+ .++.+|++++++++++ +++++++
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEYEI--------NAKKHGVSVVFSY--LD-ENMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CC-TTSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCCeEEEee--cC-cccCCCHHHHHHhccC--CCEEEEe
Confidence 777666666 999999977766543 3335565554454 44 3457888999999975 8999987
Q ss_pred CCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccc--cCCCC-CCCCcceEEEeCCCCCCCCC--ceEEEE-Ee
Q 022564 203 ASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVA--AGVIP-SPFEYADVVTTTTHKSLRGP--RGAMIF-FR 271 (295)
Q Consensus 203 ~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~--~~~~~-~~~~~~D~~~~s~~K~l~gp--~gG~l~-~~ 271 (295)
.++|+ ... ++++|+++|++||+++|+|++|+..... ..... ......++++.|++|+++.| +.|+++ .+
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 55553 444 4777888888999999999998755442 01000 01112558899999988523 338888 66
Q ss_pred CCchhhh
Q 022564 272 KGVKEIN 278 (295)
Q Consensus 272 ~~~~~~~ 278 (295)
+++.+..
T Consensus 232 ~~~~~~~ 238 (361)
T 3ftb_A 232 KEIAAKI 238 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 158
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.76 E-value=1.7e-18 Score=168.31 Aligned_cols=165 Identities=17% Similarity=0.114 Sum_probs=124.6
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.++++.+++++|++. .+++++|++ ++.+++.+++++||+|+++.+.|.++.... +...|+++..++.
T Consensus 176 ~e~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~-------~~l~Ga~~v~v~~ 243 (730)
T 1c4k_A 176 VAAEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSA-------LAMAGGRPVYLQT 243 (730)
T ss_dssp HHHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH-------TTTTCCEEEEECE
T ss_pred HHHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHH-------HHHCCCEEEEEeC
Confidence 346699999999975 688999997 888899999999999999998888876420 3356666555543
Q ss_pred ecCCCC----CCCCHHHH-----HHHHhhcC------C----cEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 174 RLNEST----GYIDYDQL-----EKSATLFR------P----KLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 174 ~~~~~~----~~id~e~l-----~~~i~~~~------t----k~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.. ++ +.+|+++| ++++++ + + |+++++.+|+ |.+.|+++|+++|++||+++++|+||+
T Consensus 244 ~~--~~~~i~g~id~e~L~~~~le~~i~~-~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~ 320 (730)
T 1c4k_A 244 NR--NPYGFIGGIYDSDFDEKKIRELAAK-VDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWV 320 (730)
T ss_dssp EE--CTTCCEEEECGGGSCHHHHHHHTTT-SSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTC
T ss_pred Cc--cccCccCCCCHHHHhhhHHHHHhhc-CCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccc
Confidence 22 22 23688887 888875 3 5 8899986665 688999999999999999999999997
Q ss_pred ccccccC----CCCCCC--Ccce----EEEeCCCCCCCCCce-EEEEEeCCc
Q 022564 234 SGLVAAG----VIPSPF--EYAD----VVTTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 234 ~g~~~~~----~~~~~~--~~~D----~~~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
.+....+ ...... .++| ++++|+||+|+||.+ |+++++++.
T Consensus 321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~ 372 (730)
T 1c4k_A 321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSH 372 (730)
T ss_dssp CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGG
T ss_pred cccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchh
Confidence 6532211 111111 1477 999999999999886 888888764
No 159
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.76 E-value=3.2e-18 Score=159.09 Aligned_cols=201 Identities=16% Similarity=0.139 Sum_probs=135.0
Q ss_pred cCceecCC-C--CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 47 KGLELIPS-E--NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 47 ~~i~L~~~-~--~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
+.++|..+ + ..+++.+.+++...... .... +...|+. ... ...+++++++++++|.+ + .+++++|+.
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~-~~~~--~~~~Y~~-~g~-~~~~~l~~~la~~~g~~-~----~i~~~sGt~ 159 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPS-AIEN--GPYDYTR-SGN-PTRDALESLLAKLDKAD-R----AFCFTSGMA 159 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSS-SSCC--CSCSBTT-TCC-HHHHHHHHHHHHHHTCS-E----EEEESSHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhc-cccc--CCccccC-CCC-HHHHHHHHHHHHHhCCC-e----EEEECCHHH
Confidence 45777664 3 34566776666543111 0000 1111221 111 24566779999999976 2 677777766
Q ss_pred HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 124 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 124 a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
++.+++ .++++||+|+++++.|+++..... ..+...|.++..+ +.+ |++++++++++ +|++|+++.
T Consensus 160 al~~~l-~~~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~v--~~~------d~~~l~~~i~~-~tk~v~l~~ 225 (464)
T 1ibj_A 160 ALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGVVVKRV--NTT------KLDEVAAAIGP-QTKLVWLES 225 (464)
T ss_dssp HHHHHH-TTSCTTCEEEEESSCCHHHHHHHH----HTSGGGTCEEEEE--CTT------SHHHHHHHCCS-SEEEEEECS
T ss_pred HHHHHH-HHhCCCCEEEEECCCchhHHHHHH----HHHHHcCCEEEEe--CCC------CHHHHHHHhcc-CceEEEEeC
Confidence 776555 478999999999988877643211 0123455444333 322 89999999986 899999985
Q ss_pred CCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce---EEEEEeC-Cch
Q 022564 204 SAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG---AMIFFRK-GVK 275 (295)
Q Consensus 204 ~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g---G~l~~~~-~~~ 275 (295)
++| |.+.|+++|+++|++||+++|+|++|+.|....... . ++|+++.|+||+|+||.| |++++++ ++.
T Consensus 226 p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~ 299 (464)
T 1ibj_A 226 PTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGEKLA 299 (464)
T ss_dssp SCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSHHHH
T ss_pred CCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChHHHH
Confidence 555 478899999999999999999999998765421111 2 489999999999988754 9999986 443
No 160
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.76 E-value=2.1e-18 Score=156.83 Aligned_cols=160 Identities=16% Similarity=0.118 Sum_probs=121.1
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
..+++.+++++|.+ + .+++++|+.++..++.+++++||+|+++.+.|+++....... +...|.++..+ +
T Consensus 62 ~~l~~~la~~~g~~-~----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~----~~~~g~~~~~v--~ 130 (389)
T 3acz_A 62 EQFEEMVCSIEGAA-G----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHW----LPRFGIEVDLI--D 130 (389)
T ss_dssp HHHHHHHHHHHTCS-E----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHH----HHHTTCEEEEE--C
T ss_pred HHHHHHHHHHhCCC-e----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCEEEEE--C
Confidence 34558889999987 3 788888877888788888999999999998888765432110 12345444333 2
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVV 252 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~ 252 (295)
. .|++++++++++ ++++|++++++| |...|+++|.++|++||+++|+|++|+.+.....+ .. ++|++
T Consensus 131 ~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~-~~---~~di~ 199 (389)
T 3acz_A 131 T------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPL-EL---GADIA 199 (389)
T ss_dssp T------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGG-GT---TCSEE
T ss_pred C------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcc-cc---CCeEE
Confidence 2 489999999987 899999975555 47889999999999999999999999876532111 12 49999
Q ss_pred EeCCCCCCCCCc---eEEEEEeC-Cchh
Q 022564 253 TTTTHKSLRGPR---GAMIFFRK-GVKE 276 (295)
Q Consensus 253 ~~s~~K~l~gp~---gG~l~~~~-~~~~ 276 (295)
+.|+||+++||. ||++++++ ++.+
T Consensus 200 ~~S~sK~~~~~~~~~~G~v~~~~~~~~~ 227 (389)
T 3acz_A 200 LHSVSKYINGHGDVIGGVSSAKTAEDIA 227 (389)
T ss_dssp EEETTTTTTCSSCCCCEEEEESSHHHHH
T ss_pred EECChhhccCCCCceeEEEEECcHHHHH
Confidence 999999998876 49999998 6543
No 161
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=3.9e-19 Score=159.28 Aligned_cols=202 Identities=12% Similarity=0.070 Sum_probs=131.4
Q ss_pred cCceecCCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHH
Q 022564 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPS 124 (295)
Q Consensus 47 ~~i~L~~~~~~~--~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a 124 (295)
..+.+..++++. +|++.+++.+.+... .|+......+ +++++++++|.+. .+++++|+.+
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---------~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~~g~~a 75 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDNLESD---------IYGNGAVIED----FETKIAKILGKQS-----AVFFPSGTMA 75 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTTCBCC---------BTTBSHHHHH----HHHHHHHHHTCSE-----EEEESCHHHH
T ss_pred chhhcCCCccccCCCHHHHHHHHhhcccC---------cccCCHHHHH----HHHHHHHHhCCCc-----EEEeCCHHHH
Confidence 456667777765 788888887744321 1223233343 5588889999865 5777666668
Q ss_pred HHHHHHhhcCCCCe--EEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 125 NFQVYTALLKPHDR--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 125 ~~~~~~al~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
+..++.+++.+||+ |++..+.|........ .....|..+ ++++. +++.+|+++++++ .+ ++++|+++
T Consensus 76 ~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-----~~~~~g~~~--~~v~~--~~~~~d~~~l~~~-~~-~~~~v~~~ 144 (359)
T 3pj0_A 76 QQIALRIWADRKENRRVAYHPLSHLEIHEQDG-----LKELQQITP--LLLGT--ANQLLTIDDIKSL-RE-PVSSVLIE 144 (359)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHHCCEE--EECSC--TTSCCCHHHHHTC-SS-CCSEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEeccceeeehhcch-----HHHhcCceE--EecCC--cCCCcCHHHHHhc-cC-CceEEEEE
Confidence 78788888888887 4444433222211100 012345444 44333 4578999999988 54 89999998
Q ss_pred CCCC---CCccCHH---HHHHHHHHcCCEEEEEccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCceEEEEEeCCc
Q 022564 203 ASAY---ARLYDYE---RIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 203 ~~n~---~~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
+++| |...+.+ +|.++|++||+++|+|++|..+... .+.....+ .++|+++.|+||+|++|.||+++.++++
T Consensus 145 ~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l 224 (359)
T 3pj0_A 145 LPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDF 224 (359)
T ss_dssp SSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHH
T ss_pred ecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHH
Confidence 5543 3555554 5599999999999999998755431 11111000 2479999999999999977888888876
Q ss_pred hhh
Q 022564 275 KEI 277 (295)
Q Consensus 275 ~~~ 277 (295)
.+.
T Consensus 225 ~~~ 227 (359)
T 3pj0_A 225 VQE 227 (359)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 162
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.76 E-value=3.7e-18 Score=153.23 Aligned_cols=197 Identities=18% Similarity=0.108 Sum_probs=137.3
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccC--CCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~--~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
+.|+|..++++ +++.+++++.+.+.+.. ..+|+.. ...+ +++.+++++|++++ +|++++|+
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-------~~~~----lr~~la~~~g~~~~----~i~~t~g~ 91 (360)
T 3hdo_A 27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-------SSQK----LREVAGELYGFDPS----WIIMANGS 91 (360)
T ss_dssp TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-------SCHH----HHHHHHHHHTCCGG----GEEEESSH
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-------chHH----HHHHHHHHhCcCcc----eEEEcCCH
Confidence 57899888874 58999999998876520 1123221 1233 45788888898776 89999999
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++..++.+++++||+|+++.+.|.++.. .+...|.++..++ .+ +++.+ +++++. .+++++++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~--~~l~~~---~~~~~v~i 155 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGARVRTFG--LT-GDFRI--AGFPER---YEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTCEEEEEC--BC-TTSSB--TTCCSS---BCSSEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCCEEEEee--CC-CCCCH--HHHHhh---cCCCEEEE
Confidence 9 8887889999999999999977766543 3335565554444 44 34444 444332 35788888
Q ss_pred cCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---CcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 202 GASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 202 ~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
+.++| |...|+++|.++|+++|+++|+|++|+.. ... ....+ .+.++++.|++|+++ |.+.|++++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~--~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEF--AES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEV 232 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGG--SSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHH
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhh--CCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHH
Confidence 75555 48999999999999999999999998742 111 11110 125688999999974 4445999998776
Q ss_pred hhh
Q 022564 275 KEI 277 (295)
Q Consensus 275 ~~~ 277 (295)
.+.
T Consensus 233 ~~~ 235 (360)
T 3hdo_A 233 IAA 235 (360)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 163
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.76 E-value=3e-17 Score=150.04 Aligned_cols=228 Identities=14% Similarity=0.106 Sum_probs=147.7
Q ss_pred hccCcccccCHH-HHHHHHHHHHHH-HcCceecCCC-------CCCCHHHHHHHhhhh-hccCCCCCCCCcccCCcchHH
Q 022564 22 QLNAPLEVVDPE-IADIIEHEKARQ-WKGLELIPSE-------NFTSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYID 91 (295)
Q Consensus 22 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~L~~~~-------~~~~~~v~~al~~~l-~~~~~~g~~~~~~~~~~~~~~ 91 (295)
++ ..++.++++ ++.......+.. .+.|+|..|+ .++++.+.+++. .+ ..... ..|+...+..
T Consensus 4 ~~-~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~------~~Y~~~~G~~ 75 (405)
T 3k7y_A 4 LL-SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKE------KPYLLGNGTE 75 (405)
T ss_dssp GG-GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCC------CCCCTTSSCH
T ss_pred hh-hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCC------CCCCCCCCcH
Confidence 44 355666665 444444432211 3679998875 135788888876 43 22111 1245556778
Q ss_pred HHHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcC--CCCeEEEecCCCCcccCcccccccccccccee
Q 022564 92 MAESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSI 166 (295)
Q Consensus 92 ~l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (295)
++++++.+++.+..+. +++. +++++|+|++ ++..++.++++ | |+|++++|.|+.+ ...+...|.
T Consensus 76 ~lr~aia~~~~~~~~~~~~~~~--i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~--------~~~~~~~g~ 144 (405)
T 3k7y_A 76 DFSTLTQNLIFGNNSKYIEDKK--ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINH--------VNMIESRGF 144 (405)
T ss_dssp HHHHHHHHHHHCSSCTTTTTTC--EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHH--------HHHHHTTTC
T ss_pred HHHHHHHHHHcCCCCccccccc--eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhH--------HHHHHHcCC
Confidence 8998888888665543 2331 3468899998 77767778877 8 9999999544444 445557776
Q ss_pred eeEEEeeecCCCCCCCCHHHHHHHHhh-cCCcEEEEc-CCCCC-----CccCHHHHHHHHHHcCCEEEEEcccccccccc
Q 022564 167 FFETMPYRLNESTGYIDYDQLEKSATL-FRPKLIVAG-ASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAA 239 (295)
Q Consensus 167 ~~~~v~~~~~~~~~~id~e~l~~~i~~-~~tk~i~l~-~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~ 239 (295)
++..+++. +++++.+|++++++.+++ .++++++++ ++||| ....+++|+++|++|+++||+|+++.. ....
T Consensus 145 ~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~-l~~~ 222 (405)
T 3k7y_A 145 NLKYINFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQG-FGHT 222 (405)
T ss_dssp EEEEECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTT-TSSS
T ss_pred eEEEEecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCccc-ccCC
Confidence 66555542 334689999999999975 256788887 43554 344577889999999999999999642 2221
Q ss_pred CCCC--C------CCCcceEEEeCCCCCCC--CCceEEEEE
Q 022564 240 GVIP--S------PFEYADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 240 ~~~~--~------~~~~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
+... . .....-+++.|++|+|+ |.+-|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 223 NLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp STTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred CcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 1100 0 00013478999999885 677799865
No 164
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.76 E-value=7.7e-18 Score=153.20 Aligned_cols=202 Identities=15% Similarity=0.076 Sum_probs=136.5
Q ss_pred CceecCCCCC---CCHHHHHHHhhhhhccCCCCCC-CCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 48 GLELIPSENF---TSVSVMQAVGSVMTNKYSEGYP-GARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 48 ~i~L~~~~~~---~~~~v~~al~~~l~~~~~~g~~-~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
.+++..+++. ++|.+.+++.+.+.+.. .+.. +...|+......+ +++.+++++|.+ + +|++++|++
T Consensus 48 ~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~----l~~~la~~~~~~-~----~i~~~sG~~ 117 (401)
T 2bwn_A 48 ITVWCGNDYLGMGQHPVVLAAMHEALEAVG-AGSGGTRNISGTTAYHRR----LEAEIAGLHQKE-A----ALVFSSAYN 117 (401)
T ss_dssp EEECSCSCTTSGGGCHHHHHHHHHHHHHHC-SCCCSBTTTBCCBHHHHH----HHHHHHHHTTCS-E----EEEESCHHH
T ss_pred EEEeeCCCcccCCCCHHHHHHHHHHHHHcC-CCCCCcCcccCChHHHHH----HHHHHHHHhCCC-c----EEEECCcHH
Confidence 3566555542 47789999999886521 1111 1112333333443 558888889874 3 899999998
Q ss_pred HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcE
Q 022564 124 SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 198 (295)
Q Consensus 124 a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~ 198 (295)
++..++.++. .+||+|++..+.|+++.... ...|.++..++ .+ |+++++++++. .++++
T Consensus 118 a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~~~~v~--~~------d~~~le~~l~~~~~~~~~~ 181 (401)
T 2bwn_A 118 ANDATLSTLRVLFPGLIIYSDSLNHASMIEGI--------KRNAGPKRIFR--HN------DVAHLRELIAADDPAAPKL 181 (401)
T ss_dssp HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH--------HHSCCCEEEEC--TT------CHHHHHHHHHHSCTTSCEE
T ss_pred HHHHHHHHHhcCCCCCEEEECchhhHHHHHHH--------HHcCCeEEEEc--CC------CHHHHHHHHHhhccCCceE
Confidence 7775656553 69999999998887775432 24554454443 32 78999998872 27899
Q ss_pred EEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcccccccccc-CCC---CCCC-CcceEEEeCCCCCCCCCceEEEEEe
Q 022564 199 IVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAA-GVI---PSPF-EYADVVTTTTHKSLRGPRGAMIFFR 271 (295)
Q Consensus 199 i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~-~~~---~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~ 271 (295)
|+++++++ |...|+++|.++|++||+++|+|++|+.|.... +.. ...+ ...|+++.|++|+|++ .||+++++
T Consensus 182 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~ 260 (401)
T 2bwn_A 182 IAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAAS 260 (401)
T ss_dssp EEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEEC
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecC
Confidence 98875554 578899999999999999999999999775421 110 0111 1258999999999865 45888887
Q ss_pred CCchh
Q 022564 272 KGVKE 276 (295)
Q Consensus 272 ~~~~~ 276 (295)
+++.+
T Consensus 261 ~~~~~ 265 (401)
T 2bwn_A 261 ARMVD 265 (401)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 165
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.76 E-value=3.6e-18 Score=155.98 Aligned_cols=242 Identities=11% Similarity=0.074 Sum_probs=140.6
Q ss_pred cchhccCcccccCHHHHHHHHHHHHH--HHcCceecCCCCCCCHH----HHHHHhhhhhccCCCCCCCCcccCCcchHHH
Q 022564 19 WPKQLNAPLEVVDPEIADIIEHEKAR--QWKGLELIPSENFTSVS----VMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (295)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~L~~~~~~~~~~----v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~ 92 (295)
++++.++.. .++.+...+.+.... ..+.++|..+.+...+. +.+++.+.+.+... ......|+...+..+
T Consensus 4 ~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~ 79 (417)
T 3g7q_A 4 FSLFGDKFT--RHSGITRLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKA--ADALCNYDGPQGKTA 79 (417)
T ss_dssp --------------CHHHHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHH--HHHHHSTTCTTSHHH
T ss_pred hhhhhhhhh--ccccHHHHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcc--cceeeccCCCCCcHH
Confidence 444544333 133344444443322 24679999888766444 44444444432100 000012455566788
Q ss_pred HHHHHHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHHHHhhcCCCC-----eEEEe-cCCCCcccCcccccccccccc
Q 022564 93 AESLCQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQVYTALLKPHD-----RIMAL-DLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 93 l~~~~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd-----~Vl~~-~~~~~~~~~~~~~~~~~~~~~ 163 (295)
+++++.+++.+.+|. +++ +|++|+|++ ++..++.+++++|| +|+++ .+.|+++........ ..
T Consensus 80 lr~~ia~~~~~~~g~~~~~~----~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~----~~ 151 (417)
T 3g7q_A 80 LLNALAVLLRETLGWDIEPQ----NIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDD----LF 151 (417)
T ss_dssp HHHHHHHHHHHHHCCCCCGG----GEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----C----CE
T ss_pred HHHHHHHHHHHHhCCCCCcc----cEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchh----hh
Confidence 888888888777765 554 899999999 88878899999987 89997 877766643321110 01
Q ss_pred ceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEccccccccc
Q 022564 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.+....+.+++.+..++.+|+++++ +++ ++++++++.+||| ...+ +++|+++|++||+++|+|++|+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~ 228 (417)
T 3g7q_A 152 VSARPNIELLPEGQFKYHVDFEHLH--IGE-ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG 228 (417)
T ss_dssp EECCCEEEEEGGGEEEEECCGGGCC--CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC
T ss_pred ccccCcccccCCcccccccCHHHhc--ccc-CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc
Confidence 1222333443322113568999888 555 7899988755553 5556 889999999999999999998643211
Q ss_pred c---CCCCCCCCcceEEEeCCCCCCCCC--ceEEEEEeCCchhh
Q 022564 239 A---GVIPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 239 ~---~~~~~~~~~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~ 277 (295)
. +..+ ...+.++++.|++|+ ++| +.|+++.++++.+.
T Consensus 229 ~~~~~~~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~ 270 (417)
T 3g7q_A 229 IIFSEARP-LWNPNIILCMSLSKL-GLPGSRCGIIIANDKTITA 270 (417)
T ss_dssp CBCSCCCC-CCCTTEEEEEESGGG-TCTTSCCEEEECCHHHHHH
T ss_pred cccccccc-CCCCCEEEEEechhc-cCCCcceEEEEeCHHHHHH
Confidence 1 1111 112478999999994 333 33999988776543
No 166
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=2.9e-18 Score=156.22 Aligned_cols=159 Identities=14% Similarity=0.110 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee
Q 022564 94 ESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 173 (295)
Q Consensus 94 ~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 173 (295)
.+.+++.+++++|.+. .+++++|+.++..++. ++++||+|+++.+.|++.+..... .+...|.++..++
T Consensus 57 ~~~lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~v~~v~- 125 (393)
T 1n8p_A 57 RENLERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTK----VANAHGVETSFTN- 125 (393)
T ss_dssp HHHHHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHH----TSTTTCSCCEEES-
T ss_pred HHHHHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEeC-
Confidence 3446689999999873 7899999668887888 899999999999888765432210 1223454454443
Q ss_pred ecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHc----CCEEEEEccccccccccCCCCCCCC
Q 022564 174 RLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQ----KAIMLADMAHISGLVAAGVIPSPFE 247 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~----~~~vivD~a~~~g~~~~~~~~~~~~ 247 (295)
.+ | +++++++++ +|++|+++.+|| |...|+++|.++|++| |+++|+|++|+.+... +....
T Consensus 126 -~~------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~--- 192 (393)
T 1n8p_A 126 -DL------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF--- 192 (393)
T ss_dssp -SH------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG---
T ss_pred -CC------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc---
Confidence 22 7 899999976 899999985555 4788999999999999 9999999999887653 22222
Q ss_pred cceEEEeCCCCCCCCCc---eEEEEEe-CCchh
Q 022564 248 YADVVTTTTHKSLRGPR---GAMIFFR-KGVKE 276 (295)
Q Consensus 248 ~~D~~~~s~~K~l~gp~---gG~l~~~-~~~~~ 276 (295)
++|++++|+||+++++. ||+++++ +++.+
T Consensus 193 ~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~ 225 (393)
T 1n8p_A 193 GADIVVHSATKYINGHSDVVLGVLATNNKPLYE 225 (393)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH
T ss_pred CCeEEEEECcccccCCCCceeEEEEeCCHHHHH
Confidence 49999999999887553 4999886 45443
No 167
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.75 E-value=4.6e-18 Score=152.67 Aligned_cols=194 Identities=15% Similarity=0.109 Sum_probs=130.6
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~- 123 (295)
+.|+|+.++|+ +|+.+ + +.. ..+|+. .. ..+ +++.+++++|++++ +|++++|++
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~--~~~Y~~------~~-~~~----lr~~la~~~~~~~~----~v~~~~G~~~ 86 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQT--LNRYPE------CQ-PKA----VIENYAQYAGVKPE----QVLVSRGADE 86 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCC--TTSCCC------SS-CHH----HHHHHHHHHTSCGG----GEEEESHHHH
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhh--hccCCC------cc-HHH----HHHHHHHHhCCChH----HEEEcCCHHH
Confidence 46899999885 34444 2 111 112222 11 233 44778888899876 899999998
Q ss_pred HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc
Q 022564 124 SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 202 (295)
Q Consensus 124 a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~ 202 (295)
++..++.+++++| |+|+++.+.|+++.. .+...|.++..+ +.+ +++.+|+++++++++ ++++|+++
T Consensus 87 ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~--~~~~v~l~ 153 (356)
T 1fg7_A 87 GIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVECRTV--PTL-DNWQLDLQGISDKLD--GVKVVYVC 153 (356)
T ss_dssp HHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTCEEEEC--CCC-TTSCCCHHHHHTSCT--TEEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEe--eCC-CCCCCCHHHHHHHhc--CCCEEEEe
Confidence 8877888999999 999999977766543 333556555444 454 457899999999886 78999998
Q ss_pred CCCCC--CccCHH---HHHHHHHHcCCEEEEEccccccccccCCCCC-CCCcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 203 ASAYA--RLYDYE---RIRKVCNKQKAIMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 203 ~~n~~--~~~~l~---~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~-~~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
.+||| ...+.+ +|+++|+ +|+++|+|++|+........... ...+.++++.|++|+++ |.+.|++++++++
T Consensus 154 ~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 232 (356)
T 1fg7_A 154 SPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232 (356)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence 66663 566655 4555566 99999999998754311111110 11136899999999884 3344999998876
Q ss_pred hhh
Q 022564 275 KEI 277 (295)
Q Consensus 275 ~~~ 277 (295)
.+.
T Consensus 233 ~~~ 235 (356)
T 1fg7_A 233 INL 235 (356)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 168
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.75 E-value=5.9e-18 Score=155.52 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=115.4
Q ss_pred HHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEee-
Q 022564 95 SLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY- 173 (295)
Q Consensus 95 ~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 173 (295)
..+++.+++++|.+. .+++++|+.++..++.+++++||+|+++.+.|+++..++... ....|.++ +.+
T Consensus 61 ~~l~~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~--~~~~ 129 (421)
T 2ctz_A 61 DVLEKRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVT----LKRLGIEV--RFTS 129 (421)
T ss_dssp HHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTH----HHHTTCEE--EECC
T ss_pred HHHHHHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCEE--EEEC
Confidence 345688899999863 688999866888788888999999999999998876544211 12345333 333
Q ss_pred ecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccc-cccccccCCCCCCCCcce
Q 022564 174 RLNESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAH-ISGLVAAGVIPSPFEYAD 250 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~-~~g~~~~~~~~~~~~~~D 250 (295)
+.+ |++++++++++ +|++|+++.++| |...|+++|.++|++||+++|+|++| +.|... ..... ++|
T Consensus 130 ~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-~~~~~---~~D 198 (421)
T 2ctz_A 130 REE------RPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-RPLAW---GAA 198 (421)
T ss_dssp TTC------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-CGGGG---TCS
T ss_pred CCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-Ccccc---CCe
Confidence 222 89999999987 899999974444 58889999999999999999999999 777421 11111 489
Q ss_pred EEEeCCCCCCCCCce--EEEEEe
Q 022564 251 VVTTTTHKSLRGPRG--AMIFFR 271 (295)
Q Consensus 251 ~~~~s~~K~l~gp~g--G~l~~~ 271 (295)
++++|+||+|++|.+ |++++.
T Consensus 199 i~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 199 LVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEe
Confidence 999999999988653 444443
No 169
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.75 E-value=3.5e-17 Score=148.44 Aligned_cols=228 Identities=10% Similarity=0.037 Sum_probs=143.9
Q ss_pred ccccCHHHHHHHHHHHHHH--HcCceecCCC---C--CC--CHHHHHHHhh-hhhccCCCCCCCCcccCCcchHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQ--WKGLELIPSE---N--FT--SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESL 96 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~--~~~i~L~~~~---~--~~--~~~v~~al~~-~l~~~~~~g~~~~~~~~~~~~~~~l~~~ 96 (295)
+...+++....+.+..... .+.|+|..|. + .+ ++.+++++.+ .+.+....+ |+...+..+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr~~ 78 (397)
T 3fsl_A 5 VDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASL------YLPMEGLNCYRHA 78 (397)
T ss_dssp CCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCC------CCCTTCCHHHHHH
T ss_pred CCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCcccccc------CCCCCchHHHHHH
Confidence 3444554444444433322 2568998882 2 23 4899999998 776422112 3333455677766
Q ss_pred HHHHHHHHcCC--CCCCcceeEEeCCChH-HHHHH--HHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEE
Q 022564 97 CQKRALEAFRL--DPEKWGVNVQSLSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 171 (295)
Q Consensus 97 ~~~~la~~~g~--~~~~~~~~v~~~sG~~-a~~~~--~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v 171 (295)
+.+++....+. +++. ++|++|+|++ ++..+ +.+++++||+|+++.+.|.++.. .+...|.++..+
T Consensus 79 la~~~~~~~~~~~~~~~--~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~ 148 (397)
T 3fsl_A 79 IAPLLFGADHPVLKQQR--VATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGFEVSTY 148 (397)
T ss_dssp HHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH--------HHHHTTCCEEEE
T ss_pred HHHHHhcCCcccccccc--eEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH--------HHHHcCCceEEE
Confidence 66666544331 3431 1689999999 77756 35668999999999976665533 334566556555
Q ss_pred eeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEccccccccccCCCCC
Q 022564 172 PYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPS 244 (295)
Q Consensus 172 ~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~ 244 (295)
++. +.+++.+|++++++.+++ .++++++++.+||| .. .++++|+++|++||+++|+|++|+......+....
T Consensus 149 ~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 227 (397)
T 3fsl_A 149 PWY-DEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAY 227 (397)
T ss_dssp CCE-ETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGH
T ss_pred eee-eccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccH
Confidence 542 224678999999999973 26777777766553 44 45679999999999999999998654332100000
Q ss_pred ------CCCcceEEEeCCCCCCC--CCceEEEEEe
Q 022564 245 ------PFEYADVVTTTTHKSLR--GPRGAMIFFR 271 (295)
Q Consensus 245 ------~~~~~D~~~~s~~K~l~--gp~gG~l~~~ 271 (295)
......+++.|++|+++ |.+-|++++.
T Consensus 228 ~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 228 AIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 01125688999999874 3333888763
No 170
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.75 E-value=7.8e-18 Score=154.67 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=141.5
Q ss_pred ccccCHHHHHHHHHHHHHHHcCceecCCCCCC-----CHHHHHHH--hhhhhccCCCCCCCCcccCCcchHHHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQWKGLELIPSENFT-----SVSVMQAV--GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 99 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~~-----~~~v~~al--~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 99 (295)
+....+..++.+.+ .......++|..|.+.. ++.+.+++ .+.+.+ .......|+...+..+++ +
T Consensus 15 ~~~~~~~~~~~~~~-~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~Y~~~~g~~~lr----~ 85 (427)
T 3ppl_A 15 IGLFHEDIKRKFDE-LKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAA----DGTDVRNYGGLDGIVDIR----Q 85 (427)
T ss_dssp HHHHHHHHHHHHHH-HHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCT----TSCBTTSSCCSSCCHHHH----H
T ss_pred HHHhHHHHHHHHHH-hhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhc----cchhhcCCCCCCCcHHHH----H
Confidence 33333444444433 22334568887776532 11244443 333322 111122355555556666 6
Q ss_pred HHHHHcCCCCCCcceeEEeCCChH-HH--HHHHHhhcC--C----------CCeEEEecCCCCcccCccccccccccccc
Q 022564 100 RALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLK--P----------HDRIMALDLPHGGHLSHGYQTDTKKISAV 164 (295)
Q Consensus 100 ~la~~~g~~~~~~~~~v~~~sG~~-a~--~~~~~al~~--~----------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~ 164 (295)
.++++++++++ +|++|+|++ ++ ..++.++++ | ||+|++++|.|.++.. .+...
T Consensus 86 ~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~~~ 153 (427)
T 3ppl_A 86 IWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITERF 153 (427)
T ss_dssp HHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHHT
T ss_pred HHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHHHc
Confidence 67777788886 899999999 66 357778776 6 9999999966665543 34456
Q ss_pred eeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEc-CCCCC--CccCHH---HHHHHH-HHcCCEEEEEcccccccc
Q 022564 165 SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG-ASAYA--RLYDYE---RIRKVC-NKQKAIMLADMAHISGLV 237 (295)
Q Consensus 165 g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~-~~n~~--~~~~l~---~I~~ia-~~~~~~vivD~a~~~g~~ 237 (295)
|.++..++ ++. + .+|+++++++++..++++|+++ .+||| ...+.+ +|+++| ++||++||+|++|+...+
T Consensus 154 g~~~~~v~--~~~-~-g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~ 229 (427)
T 3ppl_A 154 GFEMISVP--MNE-D-GPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTL 229 (427)
T ss_dssp TCEEEEEE--EET-T-EECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBS
T ss_pred CCEEEEeC--CCC-C-CCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCccccc
Confidence 65555555 452 3 3999999999953478998875 45553 566655 888888 999999999999875433
Q ss_pred ccCC-CCC---------CCCcceEEEeCCCCCCC-CCceEEEEEeCCchhh
Q 022564 238 AAGV-IPS---------PFEYADVVTTTTHKSLR-GPRGAMIFFRKGVKEI 277 (295)
Q Consensus 238 ~~~~-~~~---------~~~~~D~~~~s~~K~l~-gp~gG~l~~~~~~~~~ 277 (295)
.... ... ...+.++++.|++|++. |.+.|+++.++++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~ 280 (427)
T 3ppl_A 230 TDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKW 280 (427)
T ss_dssp SSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHH
T ss_pred CCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHH
Confidence 2211 100 01236799999999743 3344999998776543
No 171
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.74 E-value=5.4e-18 Score=155.63 Aligned_cols=230 Identities=15% Similarity=0.034 Sum_probs=142.1
Q ss_pred ccCcccccCHHHHHHHHHHHHHHHcCceecCCCCC-----CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 23 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~~~~-----~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
..+.+...+.+++....+.. .+...|+|..|++. +++.+++++.+.+.... + .....|+...+..+++
T Consensus 10 ~~~~l~~~~~~~~~~~~~l~-~~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~-~~~~~Y~~~~G~~~lr--- 82 (422)
T 3d6k_A 10 DAARLAQVREEVTAKYAELK-AKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--G-VDCRNYGGLLGIADIR--- 82 (422)
T ss_dssp --------CHHHHHHHHHHH-HTTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--C-CBTTSSCCSSCCHHHH---
T ss_pred CHHHHHhhHHHHHHHHHHHh-ccCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--c-hhhhCCCCCCCCHHHH---
Confidence 34566777888888776643 34567899888873 24456666654421000 0 0011244444455555
Q ss_pred HHHHHHHcCCCCCCcceeEEeCCChH-HH--HHHHHhhcCC------------CCeEEEecCCCCcccCccccccccccc
Q 022564 98 QKRALEAFRLDPEKWGVNVQSLSGSP-SN--FQVYTALLKP------------HDRIMALDLPHGGHLSHGYQTDTKKIS 162 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~~sG~~-a~--~~~~~al~~~------------gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
+.++++++++++ +|++|+|++ ++ ..++.++.++ +|+|++++|.|+++.. .+.
T Consensus 83 -~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~--------~~~ 149 (422)
T 3d6k_A 83 -ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT--------ITE 149 (422)
T ss_dssp -HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHH
T ss_pred -HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH--------HHH
Confidence 667777788876 899999999 65 4455666655 3479999966665543 344
Q ss_pred cceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE-cCCCC--CCccCHH---HHHHHHH-HcCCEEEEEcccccc
Q 022564 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA-GASAY--ARLYDYE---RIRKVCN-KQKAIMLADMAHISG 235 (295)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l-~~~n~--~~~~~l~---~I~~ia~-~~~~~vivD~a~~~g 235 (295)
..|.++..++ ++. + .+|++++++++++.++++|++ +.+|| |...+.+ +|.++|+ +||++||+|++|+.+
T Consensus 150 ~~g~~~~~v~--~~~-~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~ 225 (422)
T 3d6k_A 150 HFGFEMINVP--MTD-E-GPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH 225 (422)
T ss_dssp HHTCEEEEEE--EET-T-EECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTC
T ss_pred HcCCEEEecC--CCC-C-CCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccc
Confidence 5665555555 442 3 399999999997547888884 65555 3566655 7778888 999999999998742
Q ss_pred ccc-cCCCCCC---------CCcceEEEeCCCCCC-CCCceEEEEEeCCchh
Q 022564 236 LVA-AGVIPSP---------FEYADVVTTTTHKSL-RGPRGAMIFFRKGVKE 276 (295)
Q Consensus 236 ~~~-~~~~~~~---------~~~~D~~~~s~~K~l-~gp~gG~l~~~~~~~~ 276 (295)
.+. .+....+ ..+.++++.|++|++ +|.+.|++++++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~ 277 (422)
T 3d6k_A 226 TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIE 277 (422)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHH
T ss_pred ccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHH
Confidence 222 1111111 123678999999973 2334599999877654
No 172
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.74 E-value=2.1e-17 Score=150.52 Aligned_cols=202 Identities=13% Similarity=0.156 Sum_probs=127.6
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH--cC-CCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA--FR-LDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~--~g-~~~~~~~~~v~~~sG 121 (295)
+.|+|..+++ ++++.+.+++.+.+..... . .....|+...+..+++ +.++++ +| ++++ +|++++|
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~-~-~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~----~v~~~~G 103 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSS-P-TTCRGYGPDFGLPALR----QKLSEDFYRGFVDAK----EIFISDG 103 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTS-S-SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGG----GEEEESC
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccc-c-ccccCCCCCCCCHHHH----HHHHHHHHcCCCCHH----HEEEccC
Confidence 5688988876 3588999999887754210 0 0111233333445555 566666 57 6665 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceee-eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLNESTGYIDYDQLEKSATLFRPKLI 199 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i 199 (295)
++ ++.. +..++++||+|+++.+.|+++.. .+...|.. +..++++.+ +.+..|+++ + + ++++|
T Consensus 104 ~~~al~~-~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~~~~~-~~~~~~l~~----~-~-~~~~v 167 (400)
T 3asa_A 104 AKVDLFR-LLSFFGPNQTVAIQDPSYPAYLD--------IARLTGAKEIIALPCLQE-NAFFPEFPE----D-T-HIDIL 167 (400)
T ss_dssp HHHHHHH-HHHHHCSSCEEEEEESCCHHHHH--------HHHHTTCSEEEEEECCGG-GTTCCCCCT----T-C-CCSEE
T ss_pred hHHHHHH-HHHHcCCCCEEEECCCCcHHHHH--------HHHHcCCcceEecccchh-cCcccChhh----c-c-CccEE
Confidence 98 6664 45667899999999977766543 22345544 544543211 123444332 1 3 78999
Q ss_pred EEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEcccccccccc----CCCCCCC-CcceEEEeCCCCCCC--CCceEE
Q 022564 200 VAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF-EYADVVTTTTHKSLR--GPRGAM 267 (295)
Q Consensus 200 ~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~~g~~~~----~~~~~~~-~~~D~~~~s~~K~l~--gp~gG~ 267 (295)
+++.++|| ...+ +++|+++|+++|+++|+|++|+...... .+...+- ...++++.|++|+|+ |.+.|+
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~ 247 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGW 247 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEE
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeE
Confidence 99755553 4554 6688999999999999999987322111 1111110 124588999999884 334599
Q ss_pred EEEeCCc
Q 022564 268 IFFRKGV 274 (295)
Q Consensus 268 l~~~~~~ 274 (295)
+++++++
T Consensus 248 ~~~~~~~ 254 (400)
T 3asa_A 248 TVIPQEL 254 (400)
T ss_dssp EECCTTC
T ss_pred EeeChhh
Confidence 9998887
No 173
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.74 E-value=5.4e-18 Score=160.65 Aligned_cols=228 Identities=11% Similarity=0.085 Sum_probs=144.4
Q ss_pred CcccccCH--HHHHHHHHHHHHHH---------cCceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHH
Q 022564 25 APLEVVDP--EIADIIEHEKARQW---------KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 92 (295)
Q Consensus 25 ~~~~~~~~--~~~~~~~~~~~~~~---------~~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~ 92 (295)
..+..+++ +++.++.+..+... ..++|..+++ ++++.+.+++.+.+.. .+|+. ..+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~------~~g~~~ 142 (546)
T 2zy4_A 72 VGVGGLAKIDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGLDPAAFLHEMVDGILG---CNYPV------PPRMLN 142 (546)
T ss_dssp SCEEECCCSTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCS------SSSCCH
T ss_pred hhhccCCccccchhHHHHHHHhcCCCCcchhHHhhhecccCCCCCCChHHHHHHHHhhhc---CCCCC------CcCCHH
Confidence 34555555 77777776654431 2567665655 3566777777766532 12332 222234
Q ss_pred HHHH-HHHHHHHHcCC-----CCCCcceeEEeCCChH-HHHHHHHh-----hcCCCCeEEEecCCCCcccCccccccccc
Q 022564 93 AESL-CQKRALEAFRL-----DPEKWGVNVQSLSGSP-SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (295)
Q Consensus 93 l~~~-~~~~la~~~g~-----~~~~~~~~v~~~sG~~-a~~~~~~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (295)
++++ ++.++.+.++. +++ +|++|+|++ ++..++.+ ++++||+|++++|.|+++.. .
T Consensus 143 lr~~ia~~~~~~~~~~~~~~~~~~----~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~ 210 (546)
T 2zy4_A 143 ISEKIVRQYIIREMGADAIPSESV----NLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------I 210 (546)
T ss_dssp HHHHHHHHHHHHHTTCTTSCGGGE----EEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------H
T ss_pred HHHHHHHHHHHHhccCCCCCCCcc----eEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------H
Confidence 4444 44555665543 233 899999999 77767766 57899999999976666543 2
Q ss_pred cccceeeeEEEeeecCC-CCCCCCHHHHHHHHhhcCCcEEEEcCCCCC--Ccc---CHHHHHHHH--HHcCCEEEEEccc
Q 022564 161 ISAVSIFFETMPYRLNE-STGYIDYDQLEKSATLFRPKLIVAGASAYA--RLY---DYERIRKVC--NKQKAIMLADMAH 232 (295)
Q Consensus 161 ~~~~g~~~~~v~~~~~~-~~~~id~e~l~~~i~~~~tk~i~l~~~n~~--~~~---~l~~I~~ia--~~~~~~vivD~a~ 232 (295)
+.+.+...+.++++.++ +++.+|++++++.++. ++++|+++++||| ... .+++|.++| +++|++||+|+++
T Consensus 211 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y 289 (546)
T 2zy4_A 211 PELAQYALEEVAINADPSLNWQYPDSELDKLKDP-AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289 (546)
T ss_dssp HHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred HHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcc
Confidence 11222123334444443 3467999999988765 8999999866664 444 466788998 7899999999998
Q ss_pred cccccccCCCC-CCC-CcceEEEeCCCCCCC--CCceEEEEEeCC-chh
Q 022564 233 ISGLVAAGVIP-SPF-EYADVVTTTTHKSLR--GPRGAMIFFRKG-VKE 276 (295)
Q Consensus 233 ~~g~~~~~~~~-~~~-~~~D~~~~s~~K~l~--gp~gG~l~~~~~-~~~ 276 (295)
+.... +... ... .+.++++.|++|+++ |.+.|+++++++ +.+
T Consensus 290 ~~~~~--~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~ 336 (546)
T 2zy4_A 290 GTFAD--DFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFD 336 (546)
T ss_dssp GGGST--TCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHH
T ss_pred hhhcc--cCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHH
Confidence 74332 1100 000 136789999999885 445599999886 543
No 174
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.73 E-value=4.3e-18 Score=156.48 Aligned_cols=211 Identities=13% Similarity=0.056 Sum_probs=141.6
Q ss_pred HcCceecCCCC-C--CCHHH--HHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHc-CCCCCCccee---E
Q 022564 46 WKGLELIPSEN-F--TSVSV--MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAF-RLDPEKWGVN---V 116 (295)
Q Consensus 46 ~~~i~L~~~~~-~--~~~~v--~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~-g~~~~~~~~~---v 116 (295)
.+.|+|..+++ . .++.+ .+++.+.+......+ |+...+..++++++.+++.+.. +++++ + |
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~~i 116 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFP------YAPPQGIEELRDLWQQKMLRDNPELSID----NMSRP 116 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSS------CCCTTCCHHHHHHHHHHHHHHCTTCCGG----GBCCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccc------cCCCCCCHHHHHHHHHHHhccCcccCCC----ccceE
Confidence 46789988877 3 24555 677666553301112 3333445677766666665543 56665 7 9
Q ss_pred EeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCcccccccccccc-ceeeeEEEeeecCCCCCCCCHHHHHHHHhhc
Q 022564 117 QSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLNESTGYIDYDQLEKSATLF 194 (295)
Q Consensus 117 ~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~ 194 (295)
++|+|++ ++..++.+++++||+|+++.+.|+++.. .+.. .|.++..+ +.+.+++.+|++++++++++.
T Consensus 117 ~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~~ 186 (430)
T 2x5f_A 117 IVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGANLQTY--PIFDKDGHYTTDSLVEALQSY 186 (430)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCCEEEEE--CCBCTTSCBCSHHHHHHHHHC
T ss_pred EEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCCeEEEE--eccCccCCcCHHHHHHHHHhc
Confidence 9999988 8888889999999999999977776643 2334 56545444 454324689999999999752
Q ss_pred --CCcEEEEcCCCCC--CccC---HHHHHHHHHH-----cCCEEEEEccccccccccCCCCC---C---CCcc---eEEE
Q 022564 195 --RPKLIVAGASAYA--RLYD---YERIRKVCNK-----QKAIMLADMAHISGLVAAGVIPS---P---FEYA---DVVT 253 (295)
Q Consensus 195 --~tk~i~l~~~n~~--~~~~---l~~I~~ia~~-----~~~~vivD~a~~~g~~~~~~~~~---~---~~~~---D~~~ 253 (295)
++++++++.++|| ...+ +++|.++|++ ||+++|+|++|+........... . .... ++++
T Consensus 187 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (430)
T 2x5f_A 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRL 266 (430)
T ss_dssp CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEE
T ss_pred CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEE
Confidence 6788888755653 5566 8899999999 99999999998754332210000 0 1125 7889
Q ss_pred eCCCCCCCCC--ceEEEEE---eCCchh
Q 022564 254 TTTHKSLRGP--RGAMIFF---RKGVKE 276 (295)
Q Consensus 254 ~s~~K~l~gp--~gG~l~~---~~~~~~ 276 (295)
.|++|+|+.| +.|++++ ++++.+
T Consensus 267 ~s~sK~~~~~G~riG~~~~~~~~~~~~~ 294 (430)
T 2x5f_A 267 DGATKEFFAWGFRVGFMTFGTSDQTTKE 294 (430)
T ss_dssp EEHHHHTTCGGGCCEEEEEBCCCHHHHH
T ss_pred EecccCCCCCCCCeEEEEEecCCHHHHH
Confidence 9999988533 3499999 776544
No 175
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=1.6e-17 Score=153.29 Aligned_cols=169 Identities=16% Similarity=0.089 Sum_probs=122.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh-cCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL-LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
.+..++..++++++++++|++++ ++++++|++ +..+++.++ +++||+|+++.+.|+++..++.. .+...|
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~----~a~~~G 175 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRA----YLEAVG 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHH----HHHHTT
T ss_pred hhHHHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHH----HHHHCC
Confidence 45567777899999999999864 788888888 444444443 68999999999888887644321 112356
Q ss_pred eeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEcc-ccccccccCCCC
Q 022564 166 IFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMA-HISGLVAAGVIP 243 (295)
Q Consensus 166 ~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a-~~~g~~~~~~~~ 243 (295)
.++..++ . +++.+|+++ +++ +|++|+++.+|+ |...|+++|+++|+++|+++++|.. ++.|..... ..
T Consensus 176 ~~v~~v~--~--~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~ 245 (438)
T 1wyu_A 176 AKLLTLP--L--EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GA 245 (438)
T ss_dssp CEEEEEC--C--BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HH
T ss_pred CEEEEEc--C--cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-cc
Confidence 5555454 3 246778776 555 899999986655 5788999999999999999998865 555543221 11
Q ss_pred CCCCcceEEEeCCCC-----CCCCCceEEEEEeCCchhh
Q 022564 244 SPFEYADVVTTTTHK-----SLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 244 ~~~~~~D~~~~s~~K-----~l~gp~gG~l~~~~~~~~~ 277 (295)
. ++|++++|+|| |++||+.|++++++++.+.
T Consensus 246 ~---g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~ 281 (438)
T 1wyu_A 246 Y---GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQ 281 (438)
T ss_dssp H---TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGG
T ss_pred C---CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHh
Confidence 1 48999999887 7889955999999886553
No 176
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.73 E-value=6.6e-18 Score=151.21 Aligned_cols=203 Identities=13% Similarity=0.097 Sum_probs=130.5
Q ss_pred ceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChHHHHHH
Q 022564 49 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQV 128 (295)
Q Consensus 49 i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~ 128 (295)
-.|..+.++..+++.+++.+.+.. ..+...|+......+++ +++++++|.+. .+++++|+.++..+
T Consensus 13 ~~l~~~~~p~~~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~a 78 (357)
T 3lws_A 13 TGQISGHGKRNVGVLKTAFAAVAD-----EMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVA 78 (357)
T ss_dssp SEESSBSSCCBHHHHHHHHTTSCT-----TCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHhhc-----ccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHH
Confidence 345667767677666666543211 11122344444555555 78888888854 67777777777778
Q ss_pred HHhhcCCCC--eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC
Q 022564 129 YTALLKPHD--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAY 206 (295)
Q Consensus 129 ~~al~~~gd--~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~ 206 (295)
+.+++.+|| .|++..+.|...+.... .+...|..+ ++++. +++.+|+++++++. ++++|+++++||
T Consensus 79 l~~~~~~gd~~~vi~~~~~~~~~~~~~~-----~~~~~g~~~--~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~n 146 (357)
T 3lws_A 79 LRIWSDETDNRTVAYHPLCHLEIHEQDG-----LKELHPIET--ILVGA--ADRLMTLDEIKALP---DIACLLLELPQR 146 (357)
T ss_dssp HHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHSSCEE--EECSC--TTSCCCHHHHHTCC---SCSEEEEESSBG
T ss_pred HHHHhhcCCCcEEEecccceeeeeccch-----hhhccCcEE--EEecC--CCCCcCHHHHhcCc---CcceEEEEcccc
Confidence 888888888 56666544443322110 112334333 44432 45789999999872 589999986654
Q ss_pred ---CCcc---CHHHHHHHHHHcCCEEEEEccccccccc-cCCCCCCC-CcceEEEeCCCCCCCCCceEEEEEeCCchhh
Q 022564 207 ---ARLY---DYERIRKVCNKQKAIMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 277 (295)
Q Consensus 207 ---~~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~-~~~~~~~~-~~~D~~~~s~~K~l~gp~gG~l~~~~~~~~~ 277 (295)
|... ++++|.++|++||++||+|++|..+... .+.....+ .++|+++.|+||+|+||.||+++.++++.+.
T Consensus 147 p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~~ 225 (357)
T 3lws_A 147 EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQT 225 (357)
T ss_dssp GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHHH
T ss_pred cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHHH
Confidence 3334 5889999999999999999998632211 11110000 2378899999999999999999998876543
No 177
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.73 E-value=1.4e-17 Score=152.11 Aligned_cols=225 Identities=14% Similarity=0.064 Sum_probs=140.5
Q ss_pred CcccccCHHHHHHHHHHHHHH--HcCceecCCCC-------CCCHHHHHHHhh-hhhccCCCCCCCCcccCCcchHHHHH
Q 022564 25 APLEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAE 94 (295)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~--~~~i~L~~~~~-------~~~~~v~~al~~-~l~~~~~~g~~~~~~~~~~~~~~~l~ 94 (295)
+++..++++.+..+.+..... .+.|+|..|.. ++++.+.+++.+ .+......+ |+...+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr 79 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE------YLGITGLPSLT 79 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccC------CCCCCCcHHHH
Confidence 344555555444444433322 35688887763 467999999998 765311111 33334567788
Q ss_pred HHHHHHHHHHcCC--CCCCcceeEEe--CCChH-HHHHH--HHhhcCCCCeEEEecCCCCcccCccccccccccccceee
Q 022564 95 SLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQV--YTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIF 167 (295)
Q Consensus 95 ~~~~~~la~~~g~--~~~~~~~~v~~--~sG~~-a~~~~--~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 167 (295)
+++.+++.+.+|. +++ +|++ |+|++ ++..+ +..++.+||+|+++.+.|.++.. .+...|.+
T Consensus 80 ~~ia~~~~~~~~~~~~~~----~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~ 147 (412)
T 1yaa_A 80 SNAAKIIFGTQSDALQED----RVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGLK 147 (412)
T ss_dssp HHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTCC
T ss_pred HHHHHHHhcCCCCCCCcc----eEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCce
Confidence 7777776554452 455 7888 88888 76655 34556899999999977776543 23345655
Q ss_pred eEEEeeecCCCCCCCCHHHHHHHHhhcC-CcEEEE-cCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEcccccccccc-
Q 022564 168 FETMPYRLNESTGYIDYDQLEKSATLFR-PKLIVA-GASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAA- 239 (295)
Q Consensus 168 ~~~v~~~~~~~~~~id~e~l~~~i~~~~-tk~i~l-~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~- 239 (295)
+..+++. +++++.+|++++++++++.+ .+++++ +.+||| ... ++++|.++|++||+++|+|++|.......
T Consensus 148 ~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 226 (412)
T 1yaa_A 148 TATYPYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDL 226 (412)
T ss_dssp EEEEECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCH
T ss_pred EEEEeee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence 5555531 33467899999999997632 344444 766653 443 57788999999999999999985321110
Q ss_pred --C---CCCC-CCCc---ceEEEeCCCCCCCCCce---EEEE
Q 022564 240 --G---VIPS-PFEY---ADVVTTTTHKSLRGPRG---AMIF 269 (295)
Q Consensus 240 --~---~~~~-~~~~---~D~~~~s~~K~l~gp~g---G~l~ 269 (295)
. +... .... .++++.|++|+++ |.| |+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~GlriG~~~ 267 (412)
T 1yaa_A 227 DKDAYAVRLGVEKLSTVSPVFVCQSFAKNAG-MYGERVGCFH 267 (412)
T ss_dssp HHHTHHHHHHHHHTTTTCCEEEEEECTTTSC-CGGGCEEEEE
T ss_pred cchhHHHHHHHhcCCCCcceEEEeccCCCCC-CcCCcceEEE
Confidence 0 0000 0011 3578999999884 544 8887
No 178
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.73 E-value=6.6e-17 Score=149.62 Aligned_cols=186 Identities=13% Similarity=0.095 Sum_probs=120.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPH 136 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~g 136 (295)
+++.+.+++... .. .|.......+++ +.++++++.+ .+++++|++ ++..++.+++++|
T Consensus 56 ~~~~~~~a~~~~-~~----------~y~~~~~~~~l~----~~la~~~~~~------~~~~~~~gt~a~~~al~~l~~~g 114 (456)
T 2ez2_A 56 MSDKQWAGMMMG-DE----------AYAGSENFYHLE----RTVQELFGFK------HIVPTHQGRGAENLLSQLAIKPG 114 (456)
T ss_dssp CCHHHHHHHTTC-CC----------CSSSCHHHHHHH----HHHHHHHCCS------EEEEESSHHHHHHHHHHHHCCTT
T ss_pred CCHHHHHHhhcc-hh----------hcccChhHHHHH----HHHHHHhCCC------cEEEeCCcHHHHHHHHHHhCCCC
Confidence 467777777521 11 133334444444 7788888864 456666656 8887888889999
Q ss_pred CeEEEecCCC-CcccCccccccccccccceeeeEEEeeecC--CC-----CCCCCHHHHHHHHhhcCC----cEEEEcCC
Q 022564 137 DRIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLN--ES-----TGYIDYDQLEKSATLFRP----KLIVAGAS 204 (295)
Q Consensus 137 d~Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-----~~~id~e~l~~~i~~~~t----k~i~l~~~ 204 (295)
| +++.+.| +++.. .+...|.++..++++.+ ++ ++.+|+++|++++++ ++ ++|+++++
T Consensus 115 d--i~~~~~~~~~~~~--------~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~~~~~~v~l~~p 183 (456)
T 2ez2_A 115 Q--YVAGNMYFTTTRY--------HQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGAENIAYICLAVT 183 (456)
T ss_dssp C--EEEESSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCGGGEEEEEEESS
T ss_pred C--EeccccccchhHH--------HHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccccceeEEEEecc
Confidence 9 6777666 44322 23355655544443211 11 268899999999986 55 88888744
Q ss_pred CC---CCccC---HHHHHHHHHHcCCEEEEEcccccc---------ccccCCCCC-----CCCcceEEEeCCCCCCCCCc
Q 022564 205 AY---ARLYD---YERIRKVCNKQKAIMLADMAHISG---------LVAAGVIPS-----PFEYADVVTTTTHKSLRGPR 264 (295)
Q Consensus 205 n~---~~~~~---l~~I~~ia~~~~~~vivD~a~~~g---------~~~~~~~~~-----~~~~~D~~~~s~~K~l~gp~ 264 (295)
+| |...+ +++|.++|++||+++|+|++|+.| ....+.... .....|++++|+||+++.|.
T Consensus 184 ~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~ 263 (456)
T 2ez2_A 184 VNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNI 263 (456)
T ss_dssp BTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSS
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCc
Confidence 44 34455 999999999999999999999876 222222100 00136888888999876566
Q ss_pred eEEEEEe-CCch
Q 022564 265 GAMIFFR-KGVK 275 (295)
Q Consensus 265 gG~l~~~-~~~~ 275 (295)
||+++++ +++.
T Consensus 264 gG~~~~~~~~~~ 275 (456)
T 2ez2_A 264 GGFLCMNDDEMF 275 (456)
T ss_dssp CEEEEESCHHHH
T ss_pred eeEEEECCHHHH
Confidence 7999984 4543
No 179
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.73 E-value=1.1e-17 Score=158.30 Aligned_cols=207 Identities=12% Similarity=0.088 Sum_probs=138.3
Q ss_pred CceecCCCC-CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHH-cC-CCCCCcceeEEeCCChH-
Q 022564 48 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEA-FR-LDPEKWGVNVQSLSGSP- 123 (295)
Q Consensus 48 ~i~L~~~~~-~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~-~g-~~~~~~~~~v~~~sG~~- 123 (295)
.++|..+++ +.++++++++.+.+... +| +....+..++++++.+++.+. .+ .+.+. ..+|++|+|++
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y-----~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~~i~~t~G~t~ 175 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NY-----PVPDRCLVNTEKIINYFLQELSYKDANLAE-QTDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTC---SC-----CSSSSCCHHHHHHHHHHHHHHHTTTCCCGG-GEEEEEEEHHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHhC---CC-----CCCcccHHHHHHHHHHHHHHhcCCCCCCCC-cceEEEECCHHH
Confidence 466665554 34677777776665431 11 223345678888888888766 23 22210 01899999999
Q ss_pred HHHHHHHh-----hcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecC-CCCCCCCHHHHHHHHhhcCCc
Q 022564 124 SNFQVYTA-----LLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLN-ESTGYIDYDQLEKSATLFRPK 197 (295)
Q Consensus 124 a~~~~~~a-----l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~id~e~l~~~i~~~~tk 197 (295)
++..++.+ ++++||+|+++.+.|.++.. .+...|..+..++++.+ .+++.+|++++++++++ +++
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k 246 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIK 246 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEE
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCe
Confidence 77777777 78999999999977776644 33356666666665431 24678999999999976 899
Q ss_pred EEEEcCCCCC--CccCHH---HHHHHHH-HcCCEEEEEccccccccccCCCCCC-CCcceEEEeCCCCCCC--CCceEEE
Q 022564 198 LIVAGASAYA--RLYDYE---RIRKVCN-KQKAIMLADMAHISGLVAAGVIPSP-FEYADVVTTTTHKSLR--GPRGAMI 268 (295)
Q Consensus 198 ~i~l~~~n~~--~~~~l~---~I~~ia~-~~~~~vivD~a~~~g~~~~~~~~~~-~~~~D~~~~s~~K~l~--gp~gG~l 268 (295)
+|+++.++|| ...+.+ +|+++|+ +||+++|+|++|+... ........ ..+.++++.|++|.++ |.+.|++
T Consensus 247 ~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l 325 (533)
T 3f6t_A 247 ALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFV-PNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVI 325 (533)
T ss_dssp EEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGS-TTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEE
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccc-cCccCHhhcCCCCEEEEecCcccCCCcccceEEE
Confidence 9998755553 555544 8888888 6899999999986322 21100000 0135699999999874 3344999
Q ss_pred EEeCC
Q 022564 269 FFRKG 273 (295)
Q Consensus 269 ~~~~~ 273 (295)
+++++
T Consensus 326 ~~~~~ 330 (533)
T 3f6t_A 326 ALNEK 330 (533)
T ss_dssp EEESS
T ss_pred EECcH
Confidence 99887
No 180
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.73 E-value=2.6e-18 Score=157.39 Aligned_cols=175 Identities=10% Similarity=0.034 Sum_probs=125.3
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC----CCCeEEEecCCCCcccCccccccccccc
Q 022564 88 EYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK----PHDRIMALDLPHGGHLSHGYQTDTKKIS 162 (295)
Q Consensus 88 ~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~----~gd~Vl~~~~~~~~~~~~~~~~~~~~~~ 162 (295)
+....+++.+..++.+++|.+... ..++++|+| +..+++.+.++ +++.|+++...|.++.. ++.
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~---~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k--------Al~ 162 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA---SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMV 162 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc---eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH--------HHH
Confidence 335678888889999999997642 667778887 44434444444 38999999987777765 445
Q ss_pred cceeeeEEEeeecCCCCCCCCHHHHHHHHhhcC--CcEEEE-cCCCCC--CccCHHHHHHHHHHcCCEEEEEcccccccc
Q 022564 163 AVSIFFETMPYRLNESTGYIDYDQLEKSATLFR--PKLIVA-GASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (295)
Q Consensus 163 ~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~--tk~i~l-~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (295)
+.|.....++...+.+.+.+|+++++++|++.. .+++++ ++++++ ...|+++|+++|++||+++++|+||+....
T Consensus 163 l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~ 242 (450)
T 3bc8_A 163 TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS 242 (450)
T ss_dssp HTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred HcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh
Confidence 778776666543333567899999999997633 334444 455555 789999999999999999999999885433
Q ss_pred ccC-CCCCCC--CcceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 238 AAG-VIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 238 ~~~-~~~~~~--~~~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
... +....+ .++|+++.|+|||++.|.+ ++++++++
T Consensus 243 ~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~ 282 (450)
T 3bc8_A 243 KCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE 282 (450)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH
T ss_pred hhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH
Confidence 211 110111 3599999999999999988 77777653
No 181
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.57 E-value=3e-19 Score=162.24 Aligned_cols=210 Identities=14% Similarity=0.114 Sum_probs=143.1
Q ss_pred cCceecCCCC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeEEeCCCh
Q 022564 47 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNVQSLSGS 122 (295)
Q Consensus 47 ~~i~L~~~~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v~~~sG~ 122 (295)
+.++|..+++ .+++.+.+++.+.+.+.. .+| +.. ..++++++.+++++.+| ++++ +|++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLV-YGY------TYA--SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 5678877766 357889999988775411 122 221 45677777788877778 4554 79999998
Q ss_pred H-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 123 P-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 123 ~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+ ++.+++.+++++||+|+++.+.|.++.. .+...|.++..+++..+..++.+|++++++++++.+++++++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLL 170 (392)
Confidence 8 8887888889999999999977766643 333455444444431111135689999999997347899888
Q ss_pred cCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEcccccccccc----CCCCCCC--CcceEEEeCCCCCCC--CCceEEE
Q 022564 202 GASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAA----GVIPSPF--EYADVVTTTTHKSLR--GPRGAMI 268 (295)
Q Consensus 202 ~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~----~~~~~~~--~~~D~~~~s~~K~l~--gp~gG~l 268 (295)
+.++|+ ... ++++|.++|++||+++|+|++|+...... ......- .+.++++.|++|+|+ |.+.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (392)
T 3b1d_A 171 CNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYA 250 (392)
Confidence 755553 333 58899999999999999999987644322 1111100 125588999999984 4455988
Q ss_pred EEeCC-chhh
Q 022564 269 FFRKG-VKEI 277 (295)
Q Consensus 269 ~~~~~-~~~~ 277 (295)
+++++ +.+.
T Consensus 251 ~~~~~~~~~~ 260 (392)
T 3b1d_A 251 IIENPTLCAQ 260 (392)
Confidence 88654 5543
No 182
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.72 E-value=6.5e-17 Score=147.60 Aligned_cols=230 Identities=8% Similarity=-0.031 Sum_probs=145.8
Q ss_pred cCcccccCHHHHHHHHHHHHH--HHcCceecCCCC-------CCCHHHHHHHhhhhhcc-CCCCCCCCcccCCcchHHHH
Q 022564 24 NAPLEVVDPEIADIIEHEKAR--QWKGLELIPSEN-------FTSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMA 93 (295)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~L~~~~~-------~~~~~v~~al~~~l~~~-~~~g~~~~~~~~~~~~~~~l 93 (295)
.+++..++++.+..+.+.... ..+.++|..|.. ++++.+.+++.+.+.+. ...+ |+...+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~l 79 (412)
T 1ajs_A 6 FAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHE------YLPILGLAEF 79 (412)
T ss_dssp TTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHH
T ss_pred hhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccC------CCCCCCCHHH
Confidence 345666777666666554432 135789987762 35689999998876321 1111 3333445667
Q ss_pred HHHHHHHHHHHcCC--CCCCcceeEEe--CCChH-HHHHHH--HhhcCCC-----CeEEEecCCCCcccCcccccccccc
Q 022564 94 ESLCQKRALEAFRL--DPEKWGVNVQS--LSGSP-SNFQVY--TALLKPH-----DRIMALDLPHGGHLSHGYQTDTKKI 161 (295)
Q Consensus 94 ~~~~~~~la~~~g~--~~~~~~~~v~~--~sG~~-a~~~~~--~al~~~g-----d~Vl~~~~~~~~~~~~~~~~~~~~~ 161 (295)
++++.+++...+|. +++ +|++ |+|++ ++..++ .+++++| |+|+++.+.|.++.. .+
T Consensus 80 r~~la~~~~~~~~~~~~~~----~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~ 147 (412)
T 1ajs_A 80 RTCASRLALGDDSPALQEK----RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VF 147 (412)
T ss_dssp HHHHHHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HH
T ss_pred HHHHHHHHhcCCCCccCCC----cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HH
Confidence 75555555433332 455 7888 89888 777564 3457899 999999977776543 33
Q ss_pred ccceee-eEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCCC--Cc---cCHHHHHHHHHHcCCEEEEEcccc
Q 022564 162 SAVSIF-FETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYA--RL---YDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 162 ~~~g~~-~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~~--~~---~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
...|.+ +..+++..+ +++.+|++++++++++. ++++++++.+||| .. .++++|.++|++||+++|+|+++.
T Consensus 148 ~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~ 226 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDT-EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQ 226 (412)
T ss_dssp HHTTCSCEEEEECEET-TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHcCCceeEEEeeecC-CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 355655 555553212 45789999999999752 5667777766664 34 456789999999999999999965
Q ss_pred cccccc------CCCCC-CCCcceEEEeCCCCCCCCCce---EEEEE---eCC
Q 022564 234 SGLVAA------GVIPS-PFEYADVVTTTTHKSLRGPRG---AMIFF---RKG 273 (295)
Q Consensus 234 ~g~~~~------~~~~~-~~~~~D~~~~s~~K~l~gp~g---G~l~~---~~~ 273 (295)
...... ..... .....++++.|++|.++ +.| |++++ +++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~riG~~~~~~~~~~ 278 (412)
T 1ajs_A 227 GFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFG-LYNERVGNLTVVAKEPD 278 (412)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC-CGGGCEEEEEEECSSHH
T ss_pred cccCCcccccchHHHHHhccCCcEEEEEecccccC-CCCcceEEEEEecCCHH
Confidence 322110 01000 00013488999999874 444 99998 554
No 183
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.72 E-value=1.7e-17 Score=160.29 Aligned_cols=162 Identities=17% Similarity=0.093 Sum_probs=121.0
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeee
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 174 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 174 (295)
++++.+++++|++. .+++++|++ ++.+++.++++|||+|+++.+.|.++.. ++.+.|+....++..
T Consensus 199 eaE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 199 EAEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPT 265 (715)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCC
T ss_pred HHHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEecc
Confidence 45689999999976 688899986 8888999999999999999988888765 344677666555432
Q ss_pred cCCCCCC----C-----CHHHHHHHHhhc-CCc---EEEEcCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccccccC
Q 022564 175 LNESTGY----I-----DYDQLEKSATLF-RPK---LIVAGASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 240 (295)
Q Consensus 175 ~~~~~~~----i-----d~e~l~~~i~~~-~tk---~i~l~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~ 240 (295)
.+++. + |++++++++++. ++| +++++.+|+ |...|+++|.++|++++ +++|+||+.+.....
T Consensus 266 --~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 266 --RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp --BCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSG
T ss_pred --ccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCC
Confidence 22333 3 899999999852 344 788875566 68899999999998764 799999997753222
Q ss_pred CC--CCCCC---cceEE---EeCCCCCCCCCce-EEEEEeCCc
Q 022564 241 VI--PSPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKGV 274 (295)
Q Consensus 241 ~~--~~~~~---~~D~~---~~s~~K~l~gp~g-G~l~~~~~~ 274 (295)
.. ...+. ++|++ ++|+||+|+|+.+ |++.+++++
T Consensus 342 ~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i 384 (715)
T 3n75_A 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV 384 (715)
T ss_dssp GGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCC
T ss_pred ccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchh
Confidence 11 12222 25765 9999999999854 999998763
No 184
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.71 E-value=2.7e-16 Score=145.54 Aligned_cols=229 Identities=12% Similarity=0.070 Sum_probs=137.5
Q ss_pred chhccCcccccCH-HHHHHHHHHHHHHH-cCceecCCCC-------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchH
Q 022564 20 PKQLNAPLEVVDP-EIADIIEHEKARQW-KGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90 (295)
Q Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~i~L~~~~~-------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~ 90 (295)
.++++ .++..++ .++....+..+... ..|+|..|.. ++.+.+.+++.+...+.. .+ ...|....+.
T Consensus 22 ~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~-~~---~~~Y~~~~G~ 96 (448)
T 3meb_A 22 MSVFS-GFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLS-KY---NKEYPPVAGF 96 (448)
T ss_dssp CCTTT-TCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTT-TT---CCSCCCTTCC
T ss_pred hhHHh-cCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhccc-CC---CCCCCCCcch
Confidence 44553 3444444 45565555333222 3588876654 245677777555441100 01 1113333455
Q ss_pred HHHHHHHHHHHHHHcCCC-----CCCcceeEEe--CCChH-HHHH--HHHhhcCCCCeEEEecCCCCcccCccccccccc
Q 022564 91 DMAESLCQKRALEAFRLD-----PEKWGVNVQS--LSGSP-SNFQ--VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~~-----~~~~~~~v~~--~sG~~-a~~~--~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (295)
.++++++.+++ +|.+ ++ +|++ |+|++ ++.. .+.+++.+||+|+++++.|+++.. .
T Consensus 97 ~~lr~~ia~~l---~g~~~~~~~~~----~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~ 161 (448)
T 3meb_A 97 PLFLEAAQFLM---FGKDSKAAQEG----RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------I 161 (448)
T ss_dssp HHHHHHHHHHH---HCTTCHHHHTT----CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------H
T ss_pred HHHHHHHHHHh---cCCCccccCcC----cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------H
Confidence 66665544444 3765 44 7888 99988 7654 456778999999999977766643 3
Q ss_pred cc----cceeeeEEEeeecCCC-CCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEE
Q 022564 161 IS----AVSIFFETMPYRLNES-TGYIDYDQLEKSATL--FRPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 161 ~~----~~g~~~~~v~~~~~~~-~~~id~e~l~~~i~~--~~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~viv 228 (295)
+. ..|.++..+++. +.+ ++.+|++++++.+++ .++++++++.+||| ... ++++|+++|++||+++|+
T Consensus 162 ~~~~~~~~G~~v~~~~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~ 240 (448)
T 3meb_A 162 YDKVFNKLKVPYKEYTYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFF 240 (448)
T ss_dssp HHHHHCTTTSCCEEECCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhhHHhCCCeEEEEecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEE
Confidence 33 456555555531 434 589999999999975 25677777755664 444 466799999999999999
Q ss_pred EccccccccccCC--CCCC------CCcceEEEeCCCCCCCCC--ceEEE--EE
Q 022564 229 DMAHISGLVAAGV--IPSP------FEYADVVTTTTHKSLRGP--RGAMI--FF 270 (295)
Q Consensus 229 D~a~~~g~~~~~~--~~~~------~~~~D~~~~s~~K~l~gp--~gG~l--~~ 270 (295)
|+++...... +. ...+ .....+++.|++|.|+.| +-|++ ++
T Consensus 241 Deay~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~ 293 (448)
T 3meb_A 241 DSAYQGFATG-SFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVH 293 (448)
T ss_dssp EESCTTTSSS-CHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEEC
T ss_pred ecccccccCC-CcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeee
Confidence 9996532211 10 0000 011347799999987532 33877 55
No 185
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.71 E-value=8.3e-17 Score=145.93 Aligned_cols=222 Identities=14% Similarity=0.111 Sum_probs=137.8
Q ss_pred ccccCHHHHHHHHHHHHHH--HcCceecCCCC-------CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHH
Q 022564 27 LEVVDPEIADIIEHEKARQ--WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 97 (295)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~--~~~i~L~~~~~-------~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~ 97 (295)
+...++..+..+.+..... .+.|+|..++. ++++.+.+++.+.+.+....+ |+...+..++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~l 78 (394)
T 2ay1_A 5 LKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKT------YAGLSGEPEFQKAM 78 (394)
T ss_dssp CCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCC------CCCSSCCHHHHHHH
T ss_pred CccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCC------CCCCCCcHHHHHHH
Confidence 3444444443333333322 35688887762 357999999988765411112 33334456677555
Q ss_pred HHHHHHHcCCCCCCcceeEEe--CCChH-HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccccccccceeeeEEEe
Q 022564 98 QKRALEAFRLDPEKWGVNVQS--LSGSP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 172 (295)
Q Consensus 98 ~~~la~~~g~~~~~~~~~v~~--~sG~~-a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 172 (295)
.+++... +.+++ +|++ ++|++ ++..++.++. .+||+|+++.+.|.++.. .+...|.++..++
T Consensus 79 a~~~~~~-~~~~~----~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~ 145 (394)
T 2ay1_A 79 GELILGD-GLKSE----TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQTYR 145 (394)
T ss_dssp HHHHHGG-GCCGG----GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEEEEE
T ss_pred HHHHhCC-CCCcc----cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceEEEe
Confidence 5554321 22554 7887 88888 7776776664 499999999977666533 3334565555555
Q ss_pred eecCCCCCCCCHHHHHHHHhhc--CCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEccccccccc-------
Q 022564 173 YRLNESTGYIDYDQLEKSATLF--RPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVA------- 238 (295)
Q Consensus 173 ~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~------- 238 (295)
++.. +++.+|++++++++++. ++++++++.+||| ... ++++|.++|++||+++|+|++|+.....
T Consensus 146 ~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 224 (394)
T 2ay1_A 146 YFDA-ETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAG 224 (394)
T ss_dssp CEET-TTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHH
T ss_pred cccc-cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHH
Confidence 4321 35789999999999752 3566666755553 444 4668899999999999999998753321
Q ss_pred cC-CCCCCCCcceEEEeCCCCCCC--CCceEEEEE
Q 022564 239 AG-VIPSPFEYADVVTTTTHKSLR--GPRGAMIFF 270 (295)
Q Consensus 239 ~~-~~~~~~~~~D~~~~s~~K~l~--gp~gG~l~~ 270 (295)
.. +...+ ..++++.|++|+++ |.+-|++++
T Consensus 225 ~~~~~~~~--~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 225 TRLIASRI--PEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHC--SSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred HHHHhhcC--CCEEEEEeccCCCcCcCCccceEEE
Confidence 10 10001 13477899999884 223399987
No 186
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.71 E-value=8.8e-17 Score=145.79 Aligned_cols=206 Identities=13% Similarity=0.065 Sum_probs=131.3
Q ss_pred HcCceecCCC---C----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC--CCCCCcceeE
Q 022564 46 WKGLELIPSE---N----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR--LDPEKWGVNV 116 (295)
Q Consensus 46 ~~~i~L~~~~---~----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~v 116 (295)
.+.|+|..|. + ++++.+.+++.+.+.+....+ |+...+..++++++.+++.+..+ ++++ +|
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~la~~~~~~~~~~~~~~----~v 95 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKN------YLGIDGIPEFGRCTQELLFGKGSALINDK----RA 95 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCC------CCCTTCCHHHHHHHHHHHHCTTCHHHHTT----CE
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccC------CCCCCCCHHHHHHHHHHHhcCCCCccccc----cE
Confidence 3578898876 2 356999999988765411112 33334556777666666543322 2354 67
Q ss_pred Ee--CCChH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHH
Q 022564 117 QS--LSGSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 191 (295)
Q Consensus 117 ~~--~sG~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i 191 (295)
++ ++|++ ++..++.++ +.+||+|+++.+.|.++.. .+...|.++..+++... +++.+|++++++++
T Consensus 96 ~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l 166 (396)
T 2q7w_A 96 RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGLEVREYAYYDA-ENHTLDFDALINSL 166 (396)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTCEEEEEECEET-TTTEECHHHHHHHH
T ss_pred EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCCceEEEecccC-CCCCcCHHHHHHHH
Confidence 76 88888 777666555 4799999999977766543 33355655555553211 35789999999999
Q ss_pred hhc--CCcEEEEcCCCCC--Ccc---CHHHHHHHHHHcCCEEEEEcccccccccc-----CCCCCC-CCcceEEEeCCCC
Q 022564 192 TLF--RPKLIVAGASAYA--RLY---DYERIRKVCNKQKAIMLADMAHISGLVAA-----GVIPSP-FEYADVVTTTTHK 258 (295)
Q Consensus 192 ~~~--~tk~i~l~~~n~~--~~~---~l~~I~~ia~~~~~~vivD~a~~~g~~~~-----~~~~~~-~~~~D~~~~s~~K 258 (295)
++. ++++++++.+||| ... ++++|.++|++||+++|+|++|....... ...... ....++++.|++|
T Consensus 167 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 246 (396)
T 2q7w_A 167 NEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSX 246 (396)
T ss_dssp TTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTT
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccc
Confidence 752 3667777766654 333 56789999999999999999986432210 010000 0014588999999
Q ss_pred CCC--CCceEEEEE
Q 022564 259 SLR--GPRGAMIFF 270 (295)
Q Consensus 259 ~l~--gp~gG~l~~ 270 (295)
+++ |.+.|++++
T Consensus 247 ~~~~~G~riG~~~~ 260 (396)
T 2q7w_A 247 NFGLYNERVGACTL 260 (396)
T ss_dssp TTTCGGGCCEEEEE
T ss_pred cccccccccceEEE
Confidence 884 222388887
No 187
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.71 E-value=1.2e-16 Score=145.88 Aligned_cols=229 Identities=13% Similarity=0.063 Sum_probs=128.4
Q ss_pred CCcchhccCcccccCHH-HHHHHHHHHHHH-HcCceecCCCC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHH
Q 022564 17 VTWPKQLNAPLEVVDPE-IADIIEHEKARQ-WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 91 (295)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~i~L~~~~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~ 91 (295)
+|+.-.+..+++.++++ ++..+....+.. .+.|+|..+++ ..++.+.+++.+.... .. ..|....+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~-~~------~~y~~~~g~~ 82 (409)
T 4eu1_A 10 GTLEAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLG-TN------MDYAPVTGIA 82 (409)
T ss_dssp -----------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCC-SC------CCCCCTTCCH
T ss_pred cchhhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCcc-cc------ccCCCCCCcH
Confidence 45544555677777777 566665543322 35689987764 2456677777766222 11 1233344556
Q ss_pred HHHHHHHHHHHHHcCCC-----CCCcceeEE--eCCChH-HHHH---HHHhhcCCCCeEEEecCCCCcccCccccccccc
Q 022564 92 MAESLCQKRALEAFRLD-----PEKWGVNVQ--SLSGSP-SNFQ---VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKK 160 (295)
Q Consensus 92 ~l~~~~~~~la~~~g~~-----~~~~~~~v~--~~sG~~-a~~~---~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~ 160 (295)
++++++.+++ .|.+ ++ +|. .++|++ ++.. ++.+++++||+|+++.+.|.++.. .
T Consensus 83 ~lr~~ia~~~---~~~~~~~~~~~----~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~ 147 (409)
T 4eu1_A 83 SFVEEAQKLC---FGPTCAALRDG----RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------I 147 (409)
T ss_dssp HHHHHHHHHH---HCSSCHHHHTT----CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------H
T ss_pred HHHHHHHHHH---cCCCchhhccC----ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------H
Confidence 7776555555 2544 44 453 366666 5443 345567899999999976666543 3
Q ss_pred cccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC--CccC---HHHHHHHHHHcCCEEEEEcccc
Q 022564 161 ISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA--RLYD---YERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 161 ~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~--~~~~---l~~I~~ia~~~~~~vivD~a~~ 233 (295)
+...|.++..+++. +.+++.+|++++++.+++ .++++++++.+||| ...+ +++|+++|++||+++|+|++|.
T Consensus 148 ~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~ 226 (409)
T 4eu1_A 148 FAKAGMELTPYSYY-DPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQ 226 (409)
T ss_dssp HHHTTCEEEEECCE-ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred HHHcCCeEEEEEee-cCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc
Confidence 44567655555532 225678999999999973 24556666766664 4444 6669999999999999999976
Q ss_pred cccccc------CCCCC-CCCcceEEEeCCCCCCCCC--ceEEE
Q 022564 234 SGLVAA------GVIPS-PFEYADVVTTTTHKSLRGP--RGAMI 268 (295)
Q Consensus 234 ~g~~~~------~~~~~-~~~~~D~~~~s~~K~l~gp--~gG~l 268 (295)
...... ..... ......+++.|++|+|+.| +.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~ 270 (409)
T 4eu1_A 227 GFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGAL 270 (409)
T ss_dssp TTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEE
T ss_pred ccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEE
Confidence 433211 00000 0011347889999988533 33886
No 188
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.70 E-value=4.5e-17 Score=148.69 Aligned_cols=155 Identities=16% Similarity=0.153 Sum_probs=112.9
Q ss_pred HHHHHHHHHcCCCCCCcceeEEeCCChHHHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec
Q 022564 96 LCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 175 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v~~~sG~~a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 175 (295)
++++.+++++|.+. .+++++|+.|+.+ +.+++++||+|+++.+.|++.+...... +....|.++ +.++.
T Consensus 71 ~l~~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~---~~~~~g~~~--~~v~~ 139 (400)
T 3nmy_A 71 AYERCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERV---RRRTAGLDF--SFVDL 139 (400)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHT---HHHHHCCEE--EEECT
T ss_pred HHHHHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHh---hHhhcCeEE--EEECC
Confidence 45588888888763 7888888668774 6778999999999998887654332211 011235434 33332
Q ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEE
Q 022564 176 NESTGYIDYDQLEKSATLFRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVT 253 (295)
Q Consensus 176 ~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~ 253 (295)
+ |++++++++++ ++++|++++++| |...|+++|+++|++||+++|+|++|+.+...... .. ++|+++
T Consensus 140 ~------d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~---g~div~ 208 (400)
T 3nmy_A 140 T------DPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPL-SL---GADLVV 208 (400)
T ss_dssp T------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGG-GG---TCSEEE
T ss_pred C------CHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hc---CCcEEE
Confidence 2 89999999987 899999975554 47889999999999999999999999865543211 12 499999
Q ss_pred eCCCCCCCCC---ceE-EEEEeC
Q 022564 254 TTTHKSLRGP---RGA-MIFFRK 272 (295)
Q Consensus 254 ~s~~K~l~gp---~gG-~l~~~~ 272 (295)
.|++|+|+|| .|| ++++++
T Consensus 209 ~S~sK~l~g~g~~~gG~~vv~~~ 231 (400)
T 3nmy_A 209 HSATKYLNGHSDMVGGIAVVGDN 231 (400)
T ss_dssp EETTTTTTCSSSCCCEEEEECSC
T ss_pred ecCccccCCCCCcceeEEEEeCC
Confidence 9999999987 457 555544
No 189
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.70 E-value=3.2e-17 Score=152.11 Aligned_cols=190 Identities=13% Similarity=0.153 Sum_probs=120.8
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC----
Q 022564 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK---- 134 (295)
Q Consensus 60 ~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~---- 134 (295)
+.+.+++.+.+.... ..|+......++ +++++++++.+ ++++|+|++ ++..++.++++
T Consensus 55 ~~v~~a~~~~~~~~~-------~~y~~~~~~~~l----~~~la~~~~~~------~v~~t~ggt~A~~~al~~~~~~~~~ 117 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-------EAYAGSRNYYDL----KDKAKELFNYD------YIIPAHQGRGAENILFPVLLKYKQK 117 (467)
T ss_dssp CCEEHHHHHHHHTCC-------CCSSSCHHHHHH----HHHHHHHHCCC------EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-------cccccCccHHHH----HHHHHHHcCCC------cEEEcCCcHHHHHHHHHHHHHhhcc
Confidence 566666666654311 113333444444 47788888763 688888777 88888888888
Q ss_pred CCCe---EEEecCCC-CcccCccccccccccccceeeeEEEeee--cCC-----CCCCCCHHHHHHHHhh---cCCcEEE
Q 022564 135 PHDR---IMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYR--LNE-----STGYIDYDQLEKSATL---FRPKLIV 200 (295)
Q Consensus 135 ~gd~---Vl~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~-----~~~~id~e~l~~~i~~---~~tk~i~ 200 (295)
+||+ |+++ ..| +.+.. .+...|..+..++.. ++. .++.+|+++|++++++ .++++|+
T Consensus 118 ~Gd~~~~viv~-~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi 188 (467)
T 1ax4_A 118 EGKAKNPVFIS-NFHFDTTAA--------HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV 188 (467)
T ss_dssp TTCCSSCEEEE-SSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEE
T ss_pred CCCccceEEEe-ccccchhhH--------HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEE
Confidence 9999 8887 333 22211 122334333322211 111 1357899999999975 2689999
Q ss_pred EcCCCCC---C---ccCHHHHHHHHHHcCCEEEEEccccc-ccc--------ccCCCCCCC-----CcceEEEeCCCCCC
Q 022564 201 AGASAYA---R---LYDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSL 260 (295)
Q Consensus 201 l~~~n~~---~---~~~l~~I~~ia~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~~~~s~~K~l 260 (295)
+++++|+ . ..++++|.++|++||+++|+|++|.. +.. ..+.....+ ..+|++++|+||++
T Consensus 189 ~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 1ax4_A 189 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP 268 (467)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT
T ss_pred EeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccC
Confidence 8755442 2 34678999999999999999999876 222 111110000 13789999999999
Q ss_pred CCCceEEEEEe-C-Cch
Q 022564 261 RGPRGAMIFFR-K-GVK 275 (295)
Q Consensus 261 ~gp~gG~l~~~-~-~~~ 275 (295)
+.|.||+++++ + ++.
T Consensus 269 g~~~Gg~~~~~d~~~l~ 285 (467)
T 1ax4_A 269 LLNIGGLVAIRDNEEIF 285 (467)
T ss_dssp CCSSCEEEEESSCHHHH
T ss_pred CCCcceEEEeCCHHHHH
Confidence 77768888888 4 443
No 190
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.69 E-value=1.7e-16 Score=142.82 Aligned_cols=208 Identities=11% Similarity=0.076 Sum_probs=130.7
Q ss_pred cCceecCCC---CC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSE---NF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~---~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..+++..+. ++ +++.+.+++.+.+.+ + +.+.. .|. ..... ++++.+++++|++ + ++++++|
T Consensus 29 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~-~--~~~~~-~y~-~~~~~----~l~~~la~~~g~~-~----~v~~~~g 94 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLGHAYPKLTEALKEQVEK-L--LHVSN-LYE-NPWQE----ELAHKLVKHFWTE-G----KVFFANS 94 (375)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHHH-C--SCCCT-TBC-CHHHH----HHHHHHHHTSSSC-E----EEEEESS
T ss_pred EEEEcCCcccccccCCCCHHHHHHHHHHHHh-c--cccCc-ccC-CHHHH----HHHHHHHhhcCCC-C----eEEEeCc
Confidence 346665443 22 689999999998865 2 11111 132 12223 3568899999983 4 7899999
Q ss_pred hH-HHHHHHHh---hc---CCC-CeEEEecCCCCcccCccccccccccccceeee---EEEeeecCCCCCCCCHHHHHHH
Q 022564 122 SP-SNFQVYTA---LL---KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFF---ETMPYRLNESTGYIDYDQLEKS 190 (295)
Q Consensus 122 ~~-a~~~~~~a---l~---~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~id~e~l~~~ 190 (295)
++ ++..++.+ +. ++| |+|+++++.|.++...............+... ....++ .+|+++++++
T Consensus 95 ~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~ 168 (375)
T 2eh6_A 95 GTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC------CchHHHHHHH
Confidence 88 77766654 45 788 99999998877654322111000000001000 011111 1589999999
Q ss_pred HhhcCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccCC--CCCCCCcceEEEeCCCCCCC
Q 022564 191 ATLFRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGV--IPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 191 i~~~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~--~~~~~~~~D~~~~s~~K~l~ 261 (295)
+++ ++++|+++++++ |...+ +++|.++|++||+++|+|++|+ ++...... ...+ ...|++++| |+++
T Consensus 169 l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~d~~s~S--K~~~ 244 (375)
T 2eh6_A 169 LDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFN-LKPDVIALA--KGLG 244 (375)
T ss_dssp CCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEEC--GGGG
T ss_pred hcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcC-CCCCEEEEc--cccc
Confidence 976 899999985555 45657 9999999999999999999998 43222111 1111 127888666 9897
Q ss_pred CCce-EEEEEeCCchhhh
Q 022564 262 GPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 262 gp~g-G~l~~~~~~~~~~ 278 (295)
++.+ |++++++++.+..
T Consensus 245 ~g~~~G~~~~~~~~~~~~ 262 (375)
T 2eh6_A 245 GGVPIGAILAREEVAQSF 262 (375)
T ss_dssp TTSCCEEEEEEHHHHTTC
T ss_pred CCCCeEEEEEcHHHHhhh
Confidence 7666 9999988765433
No 191
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.68 E-value=8.5e-17 Score=146.01 Aligned_cols=202 Identities=12% Similarity=0.070 Sum_probs=131.6
Q ss_pred cCceecCCC-----CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~-----~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..+++..+. +++++.+.+++.+.+.... .+ .. .|. ....+++++.++++++++++ +|++++|
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~--~~-~~~-----~~~~~~l~~~la~~~~~~~~----~v~~~~g 112 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM-AM--PQ-TLP-----TPMRGEFYRTLTAILPPELN----RVFPVNS 112 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC-CC--CT-TSC-----CHHHHHHHHHHHHTSCTTEE----EEEEESS
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCC-CC--cc-ccC-----CHHHHHHHHHHHHhcCCCcC----EEEEcCc
Confidence 346665442 2478999999999886521 11 11 121 23445577899999987665 7889888
Q ss_pred hH-HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccccccccceeee----------EEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFF----------ETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~----------~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++..++.++. .+||+|+++++.|.+...... ...|... ....++ ..|+++++
T Consensus 113 g~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~------~~d~~~l~ 179 (395)
T 1vef_A 113 GTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL-------SVTWEPKYREPFLPLVEPVEFIP------YNDVEALK 179 (395)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-------HTCCCHHHHGGGCSCSSCEEEEC------TTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh-------hhcCCcccccccCCCCCCeeEeC------CCcHHHHH
Confidence 88 8877777663 688999999877655432111 1112110 011111 24899999
Q ss_pred HHHhhcCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC-CCC-CC-cceEEEeCCCCC
Q 022564 189 KSATLFRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSP-FE-YADVVTTTTHKS 259 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~-~~-~~D~~~~s~~K~ 259 (295)
+++++ ++++|+++++++ |...+ +++|.++|++||+++|+|++|+ |....+.. ... .. ..|++ |++|+
T Consensus 180 ~~i~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~ 255 (395)
T 1vef_A 180 RAVDE-ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKA 255 (395)
T ss_dssp HHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGG
T ss_pred HHhcc-CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEccc
Confidence 99986 889888864433 56667 9999999999999999999998 43221110 000 01 36776 55999
Q ss_pred CCCCce-EEEEEeCCchhhh
Q 022564 260 LRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 260 l~gp~g-G~l~~~~~~~~~~ 278 (295)
|+++.+ |++++++++.+..
T Consensus 256 ~~~g~~~G~~~~~~~~~~~l 275 (395)
T 1vef_A 256 LGGGVPLGVAVMREEVARSM 275 (395)
T ss_dssp GGTTSSCEEEEEEHHHHHTS
T ss_pred ccCCCceEEEEehHHHHhhh
Confidence 987655 9999998765543
No 192
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.68 E-value=2.1e-16 Score=141.09 Aligned_cols=195 Identities=11% Similarity=0.042 Sum_probs=132.7
Q ss_pred HcCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH
Q 022564 46 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP 123 (295)
Q Consensus 46 ~~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~ 123 (295)
++.|+|..++++ +++++.+++.+.+.... +|+.. .. .+ +++++++++|++++ +|++|+|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~----lr~~la~~~~~~~~----~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPEP------DA-GT----LRQMLAKRNSVDNN----AILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCCT------TC-HH----HHHHHHHHTTCCGG----GEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCCC------cH-HH----HHHHHHHHhCcCHH----HEEEcCCHH
Confidence 467999888774 58899999988874322 33322 22 33 55889999999876 899999999
Q ss_pred -HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeec-CCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 124 -SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-NESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 124 -a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
++..++.++. ||+|+++.+.|.++.. .+...|.++..++ . + +...+++ + ++++|++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~-~~~~~~~--------~-~~~~v~i 135 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEYED--------ACRMYEHEVCFYP--SNE-DIGEADF--------S-NMDFCWL 135 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHHHH--------HHHHTTCEEEEEE--TTS-CGGGSCC--------T-TCSEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHHHH--------HHHHcCCeEEEEe--cCC-ccccCcc--------C-CCCEEEE
Confidence 7776777777 9999999966665532 3345665554444 4 3 2223333 3 8999999
Q ss_pred cCCCC--CCccCHHHHHHHHHHcC-CEEEEEccccccccccCCCCCC--CCcceEEEeCCCCCCC--CCceEEEEEeCCc
Q 022564 202 GASAY--ARLYDYERIRKVCNKQK-AIMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSLR--GPRGAMIFFRKGV 274 (295)
Q Consensus 202 ~~~n~--~~~~~l~~I~~ia~~~~-~~vivD~a~~~g~~~~~~~~~~--~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~ 274 (295)
+.++| |...++++|.++++.++ .++|+|++|+............ ..+.++++.|++|+++ |.+.|++++++++
T Consensus 136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~ 215 (350)
T 3fkd_A 136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDF 215 (350)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHH
T ss_pred eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHH
Confidence 86655 48889999999998876 7999999986433221111011 1135689999999885 3344999998776
Q ss_pred hhhhc
Q 022564 275 KEINK 279 (295)
Q Consensus 275 ~~~~~ 279 (295)
.+...
T Consensus 216 ~~~~~ 220 (350)
T 3fkd_A 216 MKRVA 220 (350)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 193
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.68 E-value=1e-16 Score=142.39 Aligned_cols=194 Identities=12% Similarity=-0.006 Sum_probs=131.0
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC---CCCCCcceeEEeCCC
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR---LDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g---~~~~~~~~~v~~~sG 121 (295)
+.++|..+++. +++.+.+++.+.+......+|+ . ....+++ +.++++++ ++++ +|++++|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~-~~~~~lr----~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYY------D-SPDEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCC------C-SSCHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCC------C-CchHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence 46899888873 5899999999877321111222 1 1234444 67777777 7765 8999999
Q ss_pred hH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEE
Q 022564 122 SP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIV 200 (295)
Q Consensus 122 ~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~ 200 (295)
++ ++..++.++ ||+|+++ +.|+++.. .+...|.++. .++.+ +++.+|++++ + ++++|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~~--~v~~~-~~~~~d~~~l-----~-~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKFL--EVPLT-KDLRIPEVNV-----G-EGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEEE--ECCCC-TTSCCCCCCC-----C-TTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeEE--EeccC-CCCCCCHHHc-----C-CCCEEE
Confidence 98 777677776 8999998 88877643 2234554443 44454 4567888777 3 789999
Q ss_pred EcCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 201 AGASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 201 l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
++.+|| |...+.++|.++++..| ++|+|++|+......-.......+.++++.|++|+++ |.+.|++++++++.+
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~ 222 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFID 222 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHH
Confidence 875555 47889999999999989 9999999874321100100011136799999999885 223499999877654
Q ss_pred h
Q 022564 277 I 277 (295)
Q Consensus 277 ~ 277 (295)
.
T Consensus 223 ~ 223 (335)
T 1uu1_A 223 A 223 (335)
T ss_dssp H
T ss_pred H
Confidence 3
No 194
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.67 E-value=6e-17 Score=150.29 Aligned_cols=189 Identities=13% Similarity=0.136 Sum_probs=118.2
Q ss_pred HHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC---
Q 022564 60 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP--- 135 (295)
Q Consensus 60 ~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~--- 135 (295)
+++.+++.+.+.... ..|+......+++ ++++++++.+ .+++++|++ |+..++.+++++
T Consensus 53 ~~v~~a~~~~l~~~~-------~~y~~~~~~~~l~----~~la~~~~~~------~v~~t~~gt~A~~~al~~~~~~~~~ 115 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-------EAYSGSRSYYALA----ESVKNIFGYQ------YTIPTHQGRGAEQIYIPVLIKKREQ 115 (467)
T ss_dssp SCCCHHHHHHTTSCC-------CCSSSCHHHHHHH----HHHHHHHCCS------EEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCc-------ceeccCchhHHHH----HHHHHHhCcC------cEEEcCCcHHHHHHHHHHHhccccc
Confidence 777788877764311 1244444445454 7788888763 577777666 888788888888
Q ss_pred --C----CeEEEecCCCCcccCccccccccccccceeeeEEE----eeecC---CCCCCCCHHHHHHHHhh---cCCcEE
Q 022564 136 --H----DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM----PYRLN---ESTGYIDYDQLEKSATL---FRPKLI 199 (295)
Q Consensus 136 --g----d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v----~~~~~---~~~~~id~e~l~~~i~~---~~tk~i 199 (295)
| |+|++. ..|........ ...+...... +++.+ +.++.+|+++|++++++ .++++|
T Consensus 116 ~~G~~~~d~Ii~~-~~h~~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~v 187 (467)
T 2oqx_A 116 EKGLDRSKMVAFS-NYFFDTTQGHS-------QINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_dssp HHCCCTTTCEEEE-SSCCHHHHHHH-------HHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCE
T ss_pred cCCCCccceEEec-ccccccchhhh-------hccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEE
Confidence 8 997765 44432111111 0111111111 11111 12457899999999974 379999
Q ss_pred EEcCCCC---CC---ccCHHHHHHHHHHcCCEEEEEccccc-ccc--------ccCCCCCCC-----CcceEEEeCCCCC
Q 022564 200 VAGASAY---AR---LYDYERIRKVCNKQKAIMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKS 259 (295)
Q Consensus 200 ~l~~~n~---~~---~~~l~~I~~ia~~~~~~vivD~a~~~-g~~--------~~~~~~~~~-----~~~D~~~~s~~K~ 259 (295)
++++++| |. ..++++|.++|++||+++|+|++|+. +.. ..+.....+ ..+|++++|+||+
T Consensus 188 i~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~ 267 (467)
T 2oqx_A 188 VATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_dssp EEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSST
T ss_pred EEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccc
Confidence 9975444 22 34688999999999999999999876 432 112211001 2378889999999
Q ss_pred CCCCceEEEEEeCC
Q 022564 260 LRGPRGAMIFFRKG 273 (295)
Q Consensus 260 l~gp~gG~l~~~~~ 273 (295)
++.|.||+++++++
T Consensus 268 ~g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 268 AMVPMGGLLCMKDD 281 (467)
T ss_dssp TCCSSCEEEEECSG
T ss_pred cCCCCceEEEecCh
Confidence 98787899988876
No 195
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.67 E-value=1.9e-17 Score=150.41 Aligned_cols=172 Identities=12% Similarity=0.055 Sum_probs=123.1
Q ss_pred HHHHHHH-HHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC----CCeEEEecCCCCcccCcccccccccccc
Q 022564 90 IDMAESL-CQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP----HDRIMALDLPHGGHLSHGYQTDTKKISA 163 (295)
Q Consensus 90 ~~~l~~~-~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~----gd~Vl~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
+..|-+. +.+|++.+ |.+... ..++++|+| ++++++.+.+++ +|+|+++...|-+++. ++.+
T Consensus 114 l~~ltn~l~ld~L~~~-G~~~~~---~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k--------AliL 181 (501)
T 3hl2_A 114 LNKITNSLVLDIIKLA-GVHTVA---NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMIT 181 (501)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCCC---cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH--------HHHH
Confidence 4444443 55777665 997642 688899999 666666776663 4999999988888876 4457
Q ss_pred ceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCC--cEEEE-cCCCC-C-CccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 164 VSIFFETMPYRLNESTGYIDYDQLEKSATLFRP--KLIVA-GASAY-A-RLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 164 ~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~t--k~i~l-~~~n~-~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.|++..+++...+.+...+|+++++++|+++.+ .++++ ++++| | ...|+++|+++|++||+++++|+||+.....
T Consensus 182 ~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~ 261 (501)
T 3hl2_A 182 AGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSK 261 (501)
T ss_dssp TTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHH
T ss_pred cCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhh
Confidence 887777776545545578999999999987432 23333 35555 3 6689999999999999999999998865533
Q ss_pred cC-CCCCCCC-c-ceEEEeCCCCCCCCCce-EEEEEeCC
Q 022564 239 AG-VIPSPFE-Y-ADVVTTTTHKSLRGPRG-AMIFFRKG 273 (295)
Q Consensus 239 ~~-~~~~~~~-~-~D~~~~s~~K~l~gp~g-G~l~~~~~ 273 (295)
.. +....+. | +|+++.|+||++..|-| |+++.+++
T Consensus 262 ~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~ 300 (501)
T 3hl2_A 262 CMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 (501)
T ss_dssp HHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH
T ss_pred hhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCH
Confidence 21 1111111 4 99999999999999988 55556654
No 196
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.66 E-value=2.1e-15 Score=138.45 Aligned_cols=219 Identities=11% Similarity=0.006 Sum_probs=133.3
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..+++..+.. ..+|++++++.+.+.+.. .++.. .|. .....++++.++++++++++ +|++++|
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~----~v~~~~g 111 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFG-GIT-----HAPAIELCRKLVAMTPQPLE----CVFLADS 111 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--CCCCS-SEE-----CHHHHHHHHHHHHHSCTTCC----EEEEESS
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--ccccc-ccC-----CHHHHHHHHHHHHhCCCCCC----EEEEeCC
Confidence 3566665552 258999999999886522 11111 111 12333466789999988776 8999999
Q ss_pred hH-HHHHHHHhhc---C----CCCeEEEecCCCCcccCccccc------cccccccceeeeEEEeeecC--CCCC-CCCH
Q 022564 122 SP-SNFQVYTALL---K----PHDRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLN--ESTG-YIDY 184 (295)
Q Consensus 122 ~~-a~~~~~~al~---~----~gd~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~--~~~~-~id~ 184 (295)
++ ++..++.++. + |||+|+++++.|.+........ +..........+..++++.. .+.+ .+|+
T Consensus 112 gtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 191 (429)
T 1s0a_A 112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDM 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHH
Confidence 88 8776766543 2 6999999998776542211100 00000000011334544321 0123 5899
Q ss_pred HHHHHHHhh--cCCcEEEEcCC-CC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEE
Q 022564 185 DQLEKSATL--FRPKLIVAGAS-AY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVV 252 (295)
Q Consensus 185 e~l~~~i~~--~~tk~i~l~~~-n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~ 252 (295)
+++++++++ .++++|++++. |+ |...+ +++|.++|++||+++|+|++|+ +|..... ..... ...|++
T Consensus 192 ~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~-~~~d~~ 270 (429)
T 1s0a_A 192 VGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE-IAPDIL 270 (429)
T ss_dssp HHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEE
T ss_pred HHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcC-CCCCEE
Confidence 999999973 25667766654 44 44566 9999999999999999999996 3322110 11011 136777
Q ss_pred EeCCCCCCCCC-ce-EEEEEeCCchhhhcc
Q 022564 253 TTTTHKSLRGP-RG-AMIFFRKGVKEINKQ 280 (295)
Q Consensus 253 ~~s~~K~l~gp-~g-G~l~~~~~~~~~~~~ 280 (295)
++ +|+|+|+ .+ |++++++++.+....
T Consensus 271 t~--sK~l~~G~~~iG~~~~~~~~~~~l~~ 298 (429)
T 1s0a_A 271 CL--GKALTGGTMTLSATLTTREVAETISN 298 (429)
T ss_dssp EE--CGGGGTSSSCCEEEEECHHHHHHHHT
T ss_pred Ee--cccccCCCccceEEEeCHHHHHHhhc
Confidence 55 4999875 44 999999887554433
No 197
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.64 E-value=3.3e-16 Score=142.48 Aligned_cols=194 Identities=9% Similarity=-0.002 Sum_probs=126.6
Q ss_pred cCceecCCCCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChH-H
Q 022564 47 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSP-S 124 (295)
Q Consensus 47 ~~i~L~~~~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~-a 124 (295)
..+++.++...+|+.+++++.+.... . .+..++ .....++.+++++++++++|++..+ +|++ |+|++ +
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~~~-~----~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~---~i~~~t~g~t~a 109 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTAAA-L----FGTSHR--QAPVKNLVGRVRSGLAELFSLPDGY---EVILGNGGATAF 109 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTTTT-T----TTSCTT--SHHHHHHHHHHHHHHHHHTTCCTTC---EEEEEETCHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcCCC-c----cCcCcC--CHHHHHHHHHHHHHHHHHhCCCCCc---eEEEeCCchhHH
Confidence 46788888888999999999773111 0 000001 1233456677889999999997422 7888 99998 8
Q ss_pred HHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccc--eeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 125 NFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 125 ~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
+.+++.+++++| +.| ...+|+... . . .+... |..+..+++ + .+...+. .+++ +|++|++
T Consensus 110 l~~~~~~l~~~gv~~v--~~~~~~~~~---~---~-~~~~~~~g~~~~~v~~--~-~g~~~~~-----~i~~-~~~~v~~ 171 (398)
T 2fyf_A 110 WDAAAFGLIDKRSLHL--TYGEFSAKF---A---S-AVSKNPFVGEPIIITS--D-PGSAPEP-----QTDP-SVDVIAW 171 (398)
T ss_dssp HHHHHHHTCSSCEEEE--ECSHHHHHH---H---H-HHHHCTTSCCCEEEEC--C-TTCCCCC-----CCCT-TCSEEEE
T ss_pred HHHHHHHhcCCCeEEE--eCCHHHHHH---H---H-HHHHhCCCCceEEEec--C-CCCCCCc-----cccC-CCCEEEE
Confidence 888899999887 433 232221100 0 0 01122 444555553 3 2333332 1444 8999998
Q ss_pred cCCCC--CCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCCce-EEEEEeCCchh
Q 022564 202 GASAY--ARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 276 (295)
Q Consensus 202 ~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l~~~~~~~~ 276 (295)
+.+|| |...|+++|.++ +|+++|+|++|+.+..+.++ ..+|++++|+||+++++.| |++++++++.+
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~-----~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~ 241 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDI-----AETDAYYFAPQKNFASDGGLWLAIMSPAALS 241 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCG-----GGCSEEEECTTSTTCSCSSEEEEEECHHHHH
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCc-----ccCcEEEEecCcccCCCCceEEEEECHHHHH
Confidence 75554 477888887776 89999999999887655432 2389999999999977756 99999987654
No 198
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.64 E-value=1.1e-15 Score=138.54 Aligned_cols=195 Identities=10% Similarity=0.079 Sum_probs=121.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcCC-
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLKP- 135 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~~- 135 (295)
.+|.+.+++.+.+.+ +..+ +. .+ ... ...++++++++++| .+ .+++++|++ ++..++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~--~~-~~-~~~----~~~~l~~~la~~~g--~~----~v~~~~~gt~a~~~al~~~~~~~ 117 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLT--SR-AF-HSD----QLGPWYEKVAKLTN--KE----MVLPMNTGAEAVETAIKTARRWA 117 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCC--CT-TS-EET----THHHHHHHHHHHHT--CS----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccc--cc-cc-CCH----HHHHHHHHHHHhcC--CC----EEEEeCcHHHHHHHHHHHHHHhh
Confidence 579999999988765 2111 11 11 112 23345588888888 33 678888777 877777766533
Q ss_pred ---------CCeEEEecCCCCcccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 136 ---------HDRIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 136 ---------gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
+|+|++..+.|.+................+. ......++. .|++++++++++ ++++|++++
T Consensus 118 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~~~~ 190 (392)
T 3ruy_A 118 YDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY------GDLEALKAAITP-NTAAFILEP 190 (392)
T ss_dssp HHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT------TCHHHHHHHCCT-TEEEEEECS
T ss_pred hhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc------ccHHHHHHHhcc-CeEEEEEeC
Confidence 7899999988876542221110000000000 000111111 289999999986 899999975
Q ss_pred CCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCC-C-cceEEEeCCCCCCCC--CceEEEEEeC
Q 022564 204 SAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF-E-YADVVTTTTHKSLRG--PRGAMIFFRK 272 (295)
Q Consensus 204 ~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~-~-~~D~~~~s~~K~l~g--p~gG~l~~~~ 272 (295)
+++ |...| +++|.++|++||+++|+|++|+ +....+. ..... . ..|++++| |+++| .++|++++++
T Consensus 191 ~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~ 267 (392)
T 3ruy_A 191 IQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAANR 267 (392)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECH
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEECH
Confidence 555 46776 9999999999999999999995 2211111 00000 1 26888765 99977 5679999988
Q ss_pred Cchhh
Q 022564 273 GVKEI 277 (295)
Q Consensus 273 ~~~~~ 277 (295)
++.+.
T Consensus 268 ~~~~~ 272 (392)
T 3ruy_A 268 DILGV 272 (392)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 76543
No 199
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.63 E-value=6.4e-15 Score=135.01 Aligned_cols=211 Identities=13% Similarity=0.045 Sum_probs=129.3
Q ss_pred cCceecCCC--CC---C-CHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeC
Q 022564 47 KGLELIPSE--NF---T-SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSL 119 (295)
Q Consensus 47 ~~i~L~~~~--~~---~-~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~ 119 (295)
..+++..+. ++ . +|++++++.+.+.... . +... .|. .....++++.+++++|++ ++ +|+++
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-~-~~~~-~~~-----~~~~~~l~~~la~~~~~~~~~----~v~~~ 110 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-H-AAAN-DFY-----NIPQLELAKKLVTYSPGNFQK----KVFFS 110 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-C-CSCS-CSC-----CHHHHHHHHHHHHHSSCSSCE----EEEEE
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-c-cccc-ccC-----CHHHHHHHHHHHHhCCCCcCC----EEEEe
Confidence 356776555 22 3 7999999999886521 1 1111 111 233445668899999987 54 89999
Q ss_pred CChH-HHHHHHHhhcC-CCCeEEEecCCCCcccCcccc------ccccccccceeeeEEEeeecCCCCCC----------
Q 022564 120 SGSP-SNFQVYTALLK-PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNESTGY---------- 181 (295)
Q Consensus 120 sG~~-a~~~~~~al~~-~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~~~~~---------- 181 (295)
+|++ ++..++.++.. +||+|+++++.|.+....... .++.+.......+..+++ + +++.
T Consensus 111 ~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~-~~~~~~~g~~~~~~ 187 (419)
T 2eo5_A 111 NSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPY--P-NPYRNPWHINGYEN 187 (419)
T ss_dssp SSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECC--C-CSSSCTTCCCTTTC
T ss_pred CchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECC--C-cccccccccccccc
Confidence 9988 88877776543 499999999877654321110 111111111112444543 2 2222
Q ss_pred ------CCHHHHH-HHHhh----cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--C
Q 022564 182 ------IDYDQLE-KSATL----FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--V 241 (295)
Q Consensus 182 ------id~e~l~-~~i~~----~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~ 241 (295)
+|+++++ +++++ .++++|++++.|+ |...+ +++|.++|++||+++|+|++|. +|..... .
T Consensus 188 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~ 267 (419)
T 2eo5_A 188 PSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAI 267 (419)
T ss_dssp HHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG
T ss_pred chhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhH
Confidence 4789999 88873 2566777665443 44555 9999999999999999999987 3322110 0
Q ss_pred CCCCCCcceEEEeCCCCCCCCC-ce-EEEEEeCCch
Q 022564 242 IPSPFEYADVVTTTTHKSLRGP-RG-AMIFFRKGVK 275 (295)
Q Consensus 242 ~~~~~~~~D~~~~s~~K~l~gp-~g-G~l~~~~~~~ 275 (295)
.... ...|++ +++|+|+++ -. |++++++++.
T Consensus 268 ~~~~-~~~d~~--t~sK~~~~G~~riG~~~~~~~~~ 300 (419)
T 2eo5_A 268 ENFN-TVPDVI--TLAKALGGGIMPIGATIFRKDLD 300 (419)
T ss_dssp GGGT-CCCSEE--EECGGGGTTTSCCEEEEEEGGGC
T ss_pred HhcC-CCCCEE--EecccccCCccceEEEEEchHhh
Confidence 1001 125766 456988764 44 9999998865
No 200
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.62 E-value=4.5e-15 Score=135.98 Aligned_cols=240 Identities=11% Similarity=0.043 Sum_probs=144.1
Q ss_pred CcchhccCcccccCHHHHHHHHHHHHHHHcCceecCC-------CCCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchH
Q 022564 18 TWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 90 (295)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~~-------~~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~ 90 (295)
+.+++|+..-..-+..++.......+.....|||..| .+++.+.|++|....+.+..+.+ |.+..+.
T Consensus 16 ~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~------Y~p~~G~ 89 (420)
T 4h51_A 16 TTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYE------YLPISGY 89 (420)
T ss_dssp CHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCC------CCCTTCC
T ss_pred hhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCC------CCCcCCh
Confidence 3456665443333445666655543333456999877 23456889998877765533222 4555777
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHH----HHHhhcCCCCeEEEecCCCCcccCccccccccccccce
Q 022564 91 DMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQ----VYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVS 165 (295)
Q Consensus 91 ~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~----~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g 165 (295)
.++++++.+++..-. .+.+. +..+.|.|++ +... +..++++|||+|++++|.++.| ...+...|
T Consensus 90 p~lr~aia~~~~g~~-~~~~~--~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y--------~~i~~~aG 158 (420)
T 4h51_A 90 QPFIDEAVKIIYGNT-VELEN--LVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNH--------YGVVKAAG 158 (420)
T ss_dssp HHHHHHHHHHHHC----CGGG--EEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHH--------HHHHHHTT
T ss_pred HHHHHHHHHHhcCCC-ccccc--cceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhH--------HHHHHHcC
Confidence 888877766653211 12211 2333355555 4332 3334568999999999555554 33444666
Q ss_pred ee-eEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEEEcCCCCC-----CccCHHHHHHHHHHcCCEEEEEcccccccc
Q 022564 166 IF-FETMPYRLNESTGYIDYDQLEKSATL--FRPKLIVAGASAYA-----RLYDYERIRKVCNKQKAIMLADMAHISGLV 237 (295)
Q Consensus 166 ~~-~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~l~~~n~~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~ 237 (295)
.+ +...++ .+++++.+|.+.+.+.+.. .++++++++++||| +...+++|+++|+++++++++|+++. +..
T Consensus 159 ~~~V~~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~-~~~ 236 (420)
T 4h51_A 159 WKNICTYAY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQ-GYA 236 (420)
T ss_dssp CCCEEEEEC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TTT
T ss_pred CeEEEeecc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhh-hhc
Confidence 54 333332 3435678899999888863 25566666655553 45568899999999999999999953 333
Q ss_pred ccCCCCCCC--------CcceEEEeCCCCCCC--CCceEEEEEeCCchh
Q 022564 238 AAGVIPSPF--------EYADVVTTTTHKSLR--GPRGAMIFFRKGVKE 276 (295)
Q Consensus 238 ~~~~~~~~~--------~~~D~~~~s~~K~l~--gp~gG~l~~~~~~~~ 276 (295)
..+.....+ ...-+++.|++|+|+ |++-|++.+..+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~ 285 (420)
T 4h51_A 237 SGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKT 285 (420)
T ss_dssp TSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHH
T ss_pred cCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHH
Confidence 222111000 002377899999774 566699988776443
No 201
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.58 E-value=6.4e-15 Score=133.91 Aligned_cols=194 Identities=14% Similarity=0.135 Sum_probs=121.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|++.+++.+.+.+... +. ..+. .....+++++++++++.+ ++++++|++ ++..++.++..
T Consensus 56 ~~p~v~~a~~~~~~~~~~--~~--~~~~-----~~~~~~l~~~la~~~~~~------~v~~~~gg~~a~~~al~~~~~~~ 120 (406)
T 4adb_A 56 AHPELREALNEQASKFWH--TG--NGYT-----NEPVLRLAKKLIDATFAD------RVFFCNSGAEANEAALKLARKFA 120 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC--CC--TTSC-----CHHHHHHHHHHHHHSSCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cc--CCcC-----CHHHHHHHHHHHhhCCCC------eEEEeCcHHHHHHHHHHHHHHHH
Confidence 489999999998865221 11 1111 123445668999998754 678888888 88877777754
Q ss_pred -----CC-CeEEEecCCCCcccCcccccccccc-----ccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 135 -----PH-DRIMALDLPHGGHLSHGYQTDTKKI-----SAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 135 -----~g-d~Vl~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
+| |+|++.++.|.+............. ...+..+ ..++ ..|++++++++++ ++++|++++
T Consensus 121 ~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~d~~~l~~~l~~-~~~~v~~~p 191 (406)
T 4adb_A 121 HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADI--RHAA------YNDINSASALIDD-STCAVIVEP 191 (406)
T ss_dssp HHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSE--EEEC------TTCHHHHHTTCST-TEEEEEECS
T ss_pred HhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCc--eEeC------CCcHHHHHHHhcC-CeEEEEEeC
Confidence 55 9999999888776422211110000 0000111 1111 1489999999986 899999984
Q ss_pred CCC-C-----CccCHHHHHHHHHHcCCEEEEEccccccccccCCCC--CCC-CcceEEEeCCCCCCCC-CceEEEEEeCC
Q 022564 204 SAY-A-----RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP--SPF-EYADVVTTTTHKSLRG-PRGAMIFFRKG 273 (295)
Q Consensus 204 ~n~-~-----~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~--~~~-~~~D~~~~s~~K~l~g-p~gG~l~~~~~ 273 (295)
.|+ + ...++++|.++|++||+++|+|++|+ |....+... ..+ ...|++++ +|+|++ .+.|+++++++
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~ 268 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLATEE 268 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcHH
Confidence 333 2 33479999999999999999999986 332211100 000 02677754 999863 24599999988
Q ss_pred chhhh
Q 022564 274 VKEIN 278 (295)
Q Consensus 274 ~~~~~ 278 (295)
+.+..
T Consensus 269 ~~~~~ 273 (406)
T 4adb_A 269 CARVM 273 (406)
T ss_dssp HHHTC
T ss_pred HHhhh
Confidence 76543
No 202
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.57 E-value=4.4e-14 Score=128.15 Aligned_cols=205 Identities=13% Similarity=0.099 Sum_probs=125.2
Q ss_pred cCceecCC--CC---CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~--~~---~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++.++ .+ ..+|++.+++.+.+.+.. .++ . .+ .....+++++++++++| .+ .+++++|
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~--~-~~-----~~~~~~~l~~~la~~~~--~~----~v~~~~g 101 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL-HTS--N-LY-----YNENIAAAAKNLAKASA--LE----RVFFTNS 101 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS-CCC--T-TS-----BCHHHHHHHHHHHHHHT--CS----EEEEESS
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc-ccc--c-cc-----CCHHHHHHHHHHHHhcC--CC----eEEEeCC
Confidence 34666544 22 247999999999886521 111 1 11 12344556688888887 33 7888888
Q ss_pred hH-HHHHHHHhhc-------CCCCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTALL-------KPHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al~-------~~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++..++.++. .++|+|+++++.|.+........ +.......+..+..+ +. .|+++++
T Consensus 102 g~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~l~ 173 (395)
T 3nx3_A 102 GTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA--KY------NDISSVE 173 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE--CT------TCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe--CC------CCHHHHH
Confidence 88 8887776664 56899999998887653211111 000000111112222 11 2799999
Q ss_pred HHHhhcCCcEEEEcC-CCC-CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCC
Q 022564 189 KSATLFRPKLIVAGA-SAY-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 189 ~~i~~~~tk~i~l~~-~n~-~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~ 259 (295)
+++++ ++++|++.+ +|+ |...+ +++|.++|++||+++|+|++|+ +|..... ....+ ...|++++ +|+
T Consensus 174 ~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~d~~t~--sK~ 249 (395)
T 3nx3_A 174 KLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQ-ILPDIMTS--AKA 249 (395)
T ss_dssp TTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT-CCCSEEEE--CGG
T ss_pred HhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcC-CCCCEEEe--ccc
Confidence 99976 788888853 333 45555 9999999999999999999986 3221110 01111 02577765 488
Q ss_pred CCCC-ceEEEEEeCCc-hhhh
Q 022564 260 LRGP-RGAMIFFRKGV-KEIN 278 (295)
Q Consensus 260 l~gp-~gG~l~~~~~~-~~~~ 278 (295)
++++ +.|++++++++ .+..
T Consensus 250 ~~~G~~~G~~~~~~~~~~~~~ 270 (395)
T 3nx3_A 250 LGCGLSVGAFVINQKVASNSL 270 (395)
T ss_dssp GTTTSCCEEEEECHHHHHHHS
T ss_pred ccCCCceEEEEEchhhhhhhc
Confidence 8654 34999999887 5544
No 203
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.56 E-value=2.3e-14 Score=131.10 Aligned_cols=206 Identities=14% Similarity=0.012 Sum_probs=124.1
Q ss_pred CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC-CCcceeEEeCCChH-HHHHHHH---h
Q 022564 57 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGVNVQSLSGSP-SNFQVYT---A 131 (295)
Q Consensus 57 ~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~~~~~v~~~sG~~-a~~~~~~---a 131 (295)
++++.+.+++.+.+.. +. .... .|....... .+++.++++++.+. + +|++++|++ ++..++. +
T Consensus 57 ~~~~~v~~a~~~~~~~-~~--~~~~-~~~~~~~~~----~l~~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~a~~ 124 (426)
T 1sff_A 57 HLHPKVVAAVEAQLKK-LS--HTCF-QVLAYEPYL----ELCEIMNQKVPGDFAK----KTLLVTTGSEAVENAVKIARA 124 (426)
T ss_dssp BTCHHHHHHHHHHTTT-CS--CCCT-TTEECHHHH----HHHHHHHHHSSCSSCE----EEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-CC--Cccc-cccCCHHHH----HHHHHHHHhCCccccc----EEEEeCchHHHHHHHHHHHHH
Confidence 3689999999998865 21 1111 122223333 35578888883222 3 899999999 8777766 6
Q ss_pred hcCCCCeEEEecCCCCcccCcccccc------ccccccceeeeEEEeeecCC--CCCCCCHHHHHHHHhh----cCCcEE
Q 022564 132 LLKPHDRIMALDLPHGGHLSHGYQTD------TKKISAVSIFFETMPYRLNE--STGYIDYDQLEKSATL----FRPKLI 199 (295)
Q Consensus 132 l~~~gd~Vl~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~v~~~~~~--~~~~id~e~l~~~i~~----~~tk~i 199 (295)
+.++| +|++.++.|.+......... +.........+..++++.+. .++.+|++++++++++ .++++|
T Consensus 125 ~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v 203 (426)
T 1sff_A 125 ATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAI 203 (426)
T ss_dssp HHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred hhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEE
Confidence 67777 89999987766532111100 00000000013335443210 1235799999999973 367888
Q ss_pred EEc-C-CCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCC-C-cceEEEeCCCCCCCC-CceEEEE
Q 022564 200 VAG-A-SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF-E-YADVVTTTTHKSLRG-PRGAMIF 269 (295)
Q Consensus 200 ~l~-~-~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~-~-~~D~~~~s~~K~l~g-p~gG~l~ 269 (295)
+++ . +|.|...+ +++|.++|++||+++|+|++|+ |....+. ..... . ..|++ |++|+|++ .+-|+++
T Consensus 204 ~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~GlriG~~~ 280 (426)
T 1sff_A 204 VIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFPLAGVT 280 (426)
T ss_dssp EECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSCCEEEE
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCCceEEEE
Confidence 875 3 34354677 9999999999999999999998 4322211 00000 1 26766 56699864 1229999
Q ss_pred EeCCchhhh
Q 022564 270 FRKGVKEIN 278 (295)
Q Consensus 270 ~~~~~~~~~ 278 (295)
+++++.+..
T Consensus 281 ~~~~~~~~l 289 (426)
T 1sff_A 281 GRAEVMDAV 289 (426)
T ss_dssp EEHHHHTTS
T ss_pred EcHHHHhhh
Confidence 998765543
No 204
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.55 E-value=7.8e-14 Score=126.56 Aligned_cols=195 Identities=13% Similarity=0.103 Sum_probs=124.5
Q ss_pred CceecCC---CC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCCh
Q 022564 48 GLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGS 122 (295)
Q Consensus 48 ~i~L~~~---~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~ 122 (295)
.+++..+ .+ +.+|++.+++.+.+.. +. ..+. .| ......++++.+++++|. + ++++++|+
T Consensus 42 ~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~-~~--~~~~-~~-----~~~~~~~l~~~la~~~g~--~----~v~~~~gg 106 (397)
T 2ord_A 42 YLDFTSGIAVNVLGHSHPRLVEAIKDQAEK-LI--HCSN-LF-----WNRPQMELAELLSKNTFG--G----KVFFANTG 106 (397)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHH-CS--CCCT-TS-----EEHHHHHHHHHHHHTTTS--C----EEEEESSH
T ss_pred EEECCccccccccCCCCHHHHHHHHHHHHh-cc--cCcc-cc-----CCHHHHHHHHHHHHhcCC--C----eEEEeCCH
Confidence 4566543 22 3589999999998865 21 1111 12 123445566888998883 3 68888887
Q ss_pred H-HHHHHHHhhcC------C-CCeEEEecCCCCcccCccccccccccccceee-----e-----EEEeeecCCCCCCCCH
Q 022564 123 P-SNFQVYTALLK------P-HDRIMALDLPHGGHLSHGYQTDTKKISAVSIF-----F-----ETMPYRLNESTGYIDY 184 (295)
Q Consensus 123 ~-a~~~~~~al~~------~-gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~-----~~v~~~~~~~~~~id~ 184 (295)
+ ++..++.++.. + +++|+++++.|.+...... ...|.. + ..+.++. .|+
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~~------~d~ 173 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSL-------TATGQPKYQKPFEPLVPGFEYFEF------NNV 173 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHH-------HHSBCHHHHGGGCSCCTTEEEECT------TCH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhh-------hccCChhhccccCCCCCCeeEecC------CCH
Confidence 7 88777777653 5 5789998877655432111 112211 0 0122222 389
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCC--C----ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCC---C-cceEEEe
Q 022564 185 DQLEKSATLFRPKLIVAGASAYA--R----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPF---E-YADVVTT 254 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~--~----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~---~-~~D~~~~ 254 (295)
+++++++++ ++++|++++++|+ . ..++++|.++|++||+++|+|++|+ |....+. ...+ . ..|+++
T Consensus 174 ~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~-~~~~~~~~~~~d~~s- 249 (397)
T 2ord_A 174 EDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGK-LFAYQKYGVVPDVLT- 249 (397)
T ss_dssp HHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSS-SSHHHHHTCCCSEEE-
T ss_pred HHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCcc-chhhhhhCCCCCeee-
Confidence 999999986 8999999855553 4 3688999999999999999999996 4332221 1110 1 268764
Q ss_pred CCCCCCCCCce-EEEEEeCCch
Q 022564 255 TTHKSLRGPRG-AMIFFRKGVK 275 (295)
Q Consensus 255 s~~K~l~gp~g-G~l~~~~~~~ 275 (295)
++|+|+++-. |++++++++.
T Consensus 250 -~sK~~~~G~r~G~~~~~~~~~ 270 (397)
T 2ord_A 250 -TAKGLGGGVPIGAVIVNERAN 270 (397)
T ss_dssp -ECGGGGTTSCCEEEEECSTTC
T ss_pred -eccccCCCcCeEEEEEchHhc
Confidence 4799975434 9999988764
No 205
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.55 E-value=4.4e-14 Score=130.05 Aligned_cols=214 Identities=11% Similarity=0.095 Sum_probs=127.4
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCC-CCcceeEEeCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDP-EKWGVNVQSLS 120 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~-~~~~~~v~~~s 120 (295)
+.+++..+.+ ..+|.+.+++.+.+.+.. .+. ...+..++..+++++++++++... + ++++++
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~------~~~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~ 111 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--GAT------ILSASNAPAVTLAERLLASFPGEGTH----KIWFGH 111 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--CSC------SSSSEEHHHHHHHHHHHHTTTCTTTE----EEEEES
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--Ccc------ccccCCHHHHHHHHHHHHhCCCCCCC----EEEEeC
Confidence 3567766654 258999999999886521 111 112223455667799999986654 3 788888
Q ss_pred ChH-HHHHHHHhh--cCCCCeEEEecCCCCcccCcccccccccc-------ccceeeeEEEeeecCCCCCCC-----CHH
Q 022564 121 GSP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI-------SAVSIFFETMPYRLNESTGYI-----DYD 185 (295)
Q Consensus 121 G~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~v~~~~~~~~~~i-----d~e 185 (295)
|++ ++..++.++ ..++++|++.++.|.+............. ......+..++ .. ..+.. |++
T Consensus 112 ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~d~~ 188 (439)
T 3dxv_A 112 SGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDP--YR-PYRNDPTGDAILT 188 (439)
T ss_dssp SHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCS--SS-CBTTBTTSHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcC--CC-cccccccHHHHHH
Confidence 888 888777765 34677888888766554321111100000 00000011122 11 11112 799
Q ss_pred HHHHHHh---hcCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCCC-C-cceEEE
Q 022564 186 QLEKSAT---LFRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSPF-E-YADVVT 253 (295)
Q Consensus 186 ~l~~~i~---~~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~~-~-~~D~~~ 253 (295)
+|+++++ ..++++|+++++++ |...+ +++|.++|++||+++|+|++|+ |....+. ..... . ..|++
T Consensus 189 ~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~- 266 (439)
T 3dxv_A 189 LLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDIL- 266 (439)
T ss_dssp HHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEE-
T ss_pred HHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEE-
Confidence 9999994 33677787764333 46666 9999999999999999999986 3212111 00000 1 26776
Q ss_pred eCCCCCCCC-CceEEEEEeCCchhhh
Q 022564 254 TTTHKSLRG-PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 254 ~s~~K~l~g-p~gG~l~~~~~~~~~~ 278 (295)
|++|+|++ .+.|++++++++.+..
T Consensus 267 -s~sK~~~~G~riG~~~~~~~~~~~~ 291 (439)
T 3dxv_A 267 -VLGKGLGGGLPLSAVIAPAEILDCA 291 (439)
T ss_dssp -EECGGGGTTSCCEEEEEEHHHHTSC
T ss_pred -EEcchhcCCcceEEEEECHHHHhhh
Confidence 56698864 3449999998876543
No 206
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.54 E-value=3.8e-14 Score=130.74 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=118.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|++.+++.+.+.+.. ..+. .| ..+...+ +++.+++++|. + .+++++|++ |+..++.++.
T Consensus 93 ~~p~v~~Ai~~~~~~~~---~~~~-~~-~~~~~~~----l~~~la~~~g~--~----~v~~~~sGseA~~~al~~~~~~~ 157 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLT---LTSR-AF-YNNVLGE----YEEYITKLFNY--H----KVLPMNTGVEAGETACKLARKWG 157 (439)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-TS-EESSHHH----HHHHHHHHHTC--S----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---cccC-cc-CCHHHHH----HHHHHHHhcCC--C----EEEEeCCHHHHHHHHHHHHHHHh
Confidence 68999999999886521 1111 12 1122333 45777777773 3 677877777 8887777653
Q ss_pred ------CCC-CeEEEecCCCCcccCccccccc-----cccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEE
Q 022564 134 ------KPH-DRIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVA 201 (295)
Q Consensus 134 ------~~g-d~Vl~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l 201 (295)
.+| |+|+++++.|.+.......... .+..-....+..++ . .|+++++++++..++++|++
T Consensus 158 ~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~le~~l~~~~~~~vi~ 229 (439)
T 2oat_A 158 YTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP--Y------NDLPALERALQDPNVAAFMV 229 (439)
T ss_dssp HHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEEC--S------SCHHHHHHHTTSTTEEEEEE
T ss_pred hhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeC--C------CCHHHHHHHhCCCCEEEEEE
Confidence 467 8999999777655321111100 00000001122222 2 28999999995337777777
Q ss_pred cCCCC--CCcc----CHHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCCC--ceEEEE
Q 022564 202 GASAY--ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRGP--RGAMIF 269 (295)
Q Consensus 202 ~~~n~--~~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~gp--~gG~l~ 269 (295)
.+.++ |... ++++|.++|++||+++|+|++|. |....+. ...+ ...|++ +++|+|++. ++|+++
T Consensus 230 ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~g~~g~~~~~~~~~-~~~Di~--t~sK~l~~G~~~~G~v~ 305 (439)
T 2oat_A 230 EPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYEN-VRPDIV--LLGKALSGGLYPVSAVL 305 (439)
T ss_dssp CSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGT-CCCSEE--EECGGGGTTSSCCEEEE
T ss_pred ECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCCcchhHHHhC-CCCcEE--EecccccCCCCCeEEEE
Confidence 64332 4344 79999999999999999999994 4322121 0111 036876 566999764 579999
Q ss_pred EeCCchhhhc
Q 022564 270 FRKGVKEINK 279 (295)
Q Consensus 270 ~~~~~~~~~~ 279 (295)
+++++.+...
T Consensus 306 ~~~~~~~~l~ 315 (439)
T 2oat_A 306 CDDDIMLTIK 315 (439)
T ss_dssp ECHHHHTTSC
T ss_pred ECHHHHhccC
Confidence 9988665443
No 207
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.53 E-value=8.6e-14 Score=128.49 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=125.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|++.+++.+.+.+.. + ..+.. +..++..++++.++++++.+.+ +|++++|++ ++.+++.++..
T Consensus 67 ~~~~v~~a~~~~~~~~~---~--~~~~~---~~~~~~~~l~~~la~~~~~~~~----~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTLD---Y--SPGFQ---YGHPLSFQLAEKITDLTPGNLN----HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTTCS---C--CCSSS---CCCHHHHHHHHHHHTTSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---C--ccccc---cCCHHHHHHHHHHHHhCCCCCC----EEEEcCcHHHHHHHHHHHHHHHH
Confidence 48999999999886521 1 11101 1123344566888998887665 789999888 88877777653
Q ss_pred ------CCCeEEEecCCCCcccCccccccc-----c--ccccceeeeEEEeeecCC-CC-CCCC--------HHHHHHHH
Q 022564 135 ------PHDRIMALDLPHGGHLSHGYQTDT-----K--KISAVSIFFETMPYRLNE-ST-GYID--------YDQLEKSA 191 (295)
Q Consensus 135 ------~gd~Vl~~~~~~~~~~~~~~~~~~-----~--~~~~~g~~~~~v~~~~~~-~~-~~id--------~e~l~~~i 191 (295)
+||+|++.++.|.+.......... . +....+ +..++++... .. ..+| +++|++++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l 212 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKLI 212 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHHH
Confidence 789999999877765321111100 0 000112 3334433210 01 1246 99999999
Q ss_pred hh---cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCCCCCcceEEEeCCCCC
Q 022564 192 TL---FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPSPFEYADVVTTTTHKS 259 (295)
Q Consensus 192 ~~---~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~~~~~~D~~~~s~~K~ 259 (295)
++ .++++|++++.++ |...+ +++|.++|++||+++|+|++|+ +|.... ...... ...|++ +++|+
T Consensus 213 ~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~-~~~di~--s~sK~ 289 (449)
T 3a8u_X 213 ELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFG-VTPDLM--CIAKQ 289 (449)
T ss_dssp HHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEE--EECGG
T ss_pred HhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcC-CCCCEE--EEccc
Confidence 73 2567777664332 45677 9999999999999999999994 543211 000001 025777 44599
Q ss_pred CCC--CceEEEEEeCCchhhhc
Q 022564 260 LRG--PRGAMIFFRKGVKEINK 279 (295)
Q Consensus 260 l~g--p~gG~l~~~~~~~~~~~ 279 (295)
|++ .+.|++++++++.+...
T Consensus 290 l~~G~~~~G~~~~~~~~~~~l~ 311 (449)
T 3a8u_X 290 VTNGAIPMGAVIASTEIYQTFM 311 (449)
T ss_dssp GGTTSSCCEEEEEEHHHHHHHH
T ss_pred ccCCCCceEEEEECHHHHHHhh
Confidence 976 34688888887665443
No 208
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.52 E-value=9.8e-14 Score=127.35 Aligned_cols=207 Identities=14% Similarity=0.053 Sum_probs=118.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|++.+++.+.+.+ ....++ ..+......+++++++++++.+.+ +|++++|++ ++..++.++.
T Consensus 46 ~~p~v~~a~~~~~~~-~~~~~~-------~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~al~~~~~~~ 113 (430)
T 3i4j_A 46 GRAEVGERMAAQAAR-LPFVHG-------SQFSSDVLEEYAGRLARFVGLPTF----RFWAVSGGSEATESAVKLARQYH 113 (430)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCT-------TTCEEHHHHHHHHHHHHHTTCTTC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccc-------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 489999999988765 211111 112234555677899999998776 899999888 8887777775
Q ss_pred -----CCCCeEEEecCCCCcccCcccccccccc-c--c--cee--eeEEEeeecCCCCCCCCHHHHHHHHhh---cCCcE
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQTDTKKI-S--A--VSI--FFETMPYRLNESTGYIDYDQLEKSATL---FRPKL 198 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-~--~--~g~--~~~~v~~~~~~~~~~id~e~l~~~i~~---~~tk~ 198 (295)
.++|+|++.++.|.++............ . . ... .+..++.+.....+..|+++|++++++ .++++
T Consensus 114 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~ 193 (430)
T 3i4j_A 114 VERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAA 193 (430)
T ss_dssp HHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEE
T ss_pred HhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEE
Confidence 4578999999877765432211100000 0 0 000 111122110000023467899998873 35566
Q ss_pred EEEcCCCC---CCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc--CCCCC-CCCcceEEEeCCCCCCCC--Cce
Q 022564 199 IVAGASAY---ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVIPS-PFEYADVVTTTTHKSLRG--PRG 265 (295)
Q Consensus 199 i~l~~~n~---~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~~~-~~~~~D~~~~s~~K~l~g--p~g 265 (295)
|+++++|+ |...+ +++|.++|++||+++|+|++|. +|.... ..... + ...|++++ .|+|++ .+.
T Consensus 194 vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~-~~~di~t~--sK~l~~G~~r~ 270 (430)
T 3i4j_A 194 FMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSG-VTPDIAVL--GKGLAAGYAPL 270 (430)
T ss_dssp EEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTT-CCCSEEEE--CGGGTTTSSCC
T ss_pred EEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcC-CCCcEEEE--cccccCCcccc
Confidence 66654432 23444 9999999999999999999986 321110 00111 1 12567765 598865 334
Q ss_pred EEEEEeCCchhhhc
Q 022564 266 AMIFFRKGVKEINK 279 (295)
Q Consensus 266 G~l~~~~~~~~~~~ 279 (295)
|++++++++.+...
T Consensus 271 G~~~~~~~i~~~~~ 284 (430)
T 3i4j_A 271 AGLLAAPQVYETVM 284 (430)
T ss_dssp EEEEECHHHHHHHH
T ss_pred EEEEECHHHHHHHh
Confidence 89999888765443
No 209
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.52 E-value=1.4e-13 Score=126.65 Aligned_cols=198 Identities=13% Similarity=0.148 Sum_probs=114.8
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|.+.+++.+.+.+.. ..+. .+ ..+...++++.+++++|. + .|++++|++ |+..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~~~---~~~~-~~-----~~~~~~~l~~~la~~~g~--~----~v~~~~sGseA~~~al~~a~~~~ 146 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLT---ICSR-AF-----FSVPLGICERYLTNLLGY--D----KVLMMNTGAEANETAYKLCRKWG 146 (433)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCT-TS-----EEHHHHHHHHHHHHHHTC--S----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCC---CccC-Cc-----CCHHHHHHHHHHHhhcCC--C----eEEEeCCHHHHHHHHHHHHHHHh
Confidence 68999999999886521 1111 11 123344466788888873 3 678878777 8887776642
Q ss_pred ------CCC-CeEEEecCCCCcccCccccccccccccceee---eEEEeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcC
Q 022564 134 ------KPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIF---FETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGA 203 (295)
Q Consensus 134 ------~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~ 203 (295)
.+| |+|+++++.|.+................+.. ..+..++. .|+++++++++..++++|++.+
T Consensus 147 ~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~------~d~~~le~~l~~~~~~~vi~ep 220 (433)
T 1z7d_A 147 YEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY------DDLEALEEELKDPNVCAFIVEP 220 (433)
T ss_dssp HHTSCCCTTCCEEEEETTC--------------------------CEEEECT------TCHHHHHHHHTSTTEEEEEECS
T ss_pred hhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC------CCHHHHHHHhCCCCEEEEEEEC
Confidence 477 9999999877665322111100000000000 01122221 3899999999433788887764
Q ss_pred CCC--CCcc----CHHHHHHHHHHcCCEEEEEccccccccccCCC-CCC-CC-cceEEEeCCCCCCCCC--ceEEEEEeC
Q 022564 204 SAY--ARLY----DYERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSP-FE-YADVVTTTTHKSLRGP--RGAMIFFRK 272 (295)
Q Consensus 204 ~n~--~~~~----~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~-~~-~~D~~~~s~~K~l~gp--~gG~l~~~~ 272 (295)
.++ |... ++++|.++|++||+++|+|++|. |....+.. ... +. ..|++ +++|++++. ++|++++++
T Consensus 221 ~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G~v~~~~ 297 (433)
T 1z7d_A 221 IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPISAVLAND 297 (433)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEEEECH
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeEEEEECH
Confidence 332 4333 79999999999999999999995 43222210 000 01 36877 556999754 579999998
Q ss_pred Cchhhhc
Q 022564 273 GVKEINK 279 (295)
Q Consensus 273 ~~~~~~~ 279 (295)
++.+...
T Consensus 298 ~~~~~l~ 304 (433)
T 1z7d_A 298 DIMLVIK 304 (433)
T ss_dssp HHHTTCC
T ss_pred HHHhhhc
Confidence 8665443
No 210
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.52 E-value=1.2e-13 Score=126.61 Aligned_cols=207 Identities=11% Similarity=0.131 Sum_probs=126.3
Q ss_pred cCceecCC---CC--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~---~~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..+++..+ .+ ..+|++.+++.+.+.+ +. ..+. .| ..+...++++.+++++|. + +|++++|
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~-~~--~~~~-~~-----~~~~~~~l~~~la~~~g~--~----~v~~~~g 122 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGET-LW--HTSN-VF-----TNEPALRLGRKLIDATFA--E----RVLFMNS 122 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTT-CC--CCCT-TS-----CCHHHHHHHHHHHHHSSC--S----EEEEESS
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHh-cc--cccC-cc-----CCHHHHHHHHHHHhhCCC--C----eEEEeCC
Confidence 34566544 22 3589999999998865 21 1111 12 123445567888888873 3 7888888
Q ss_pred hH-HHHHHHHhhcC-------CC-CeEEEecCCCCcccCcccccccccccccee---eeEEEeeecCCCCCCCCHHHHHH
Q 022564 122 SP-SNFQVYTALLK-------PH-DRIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLNESTGYIDYDQLEK 189 (295)
Q Consensus 122 ~~-a~~~~~~al~~-------~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~id~e~l~~ 189 (295)
++ ++..++.++.. +| ++|+++++.|.+................+. ......++. .|+++|++
T Consensus 123 gteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~le~ 196 (420)
T 2pb2_A 123 GTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF------NDLHAVKA 196 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT------TCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC------CCHHHHHH
Confidence 88 88878877754 67 589999977766532211110000000000 000122111 38999999
Q ss_pred HHhhcCCcEEEEcCCCC-CC-----ccCHHHHHHHHHHcCCEEEEEccccccccccCCCC-C-CCC-cceEEEeCCCCCC
Q 022564 190 SATLFRPKLIVAGASAY-AR-----LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIP-S-PFE-YADVVTTTTHKSL 260 (295)
Q Consensus 190 ~i~~~~tk~i~l~~~n~-~~-----~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~-~-~~~-~~D~~~~s~~K~l 260 (295)
++++ ++++|+++++++ +. ..++++|.++|++||+++|+|++|. |....+... . .+. ..|+++ ++|+|
T Consensus 197 ~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~diit--~sK~l 272 (420)
T 2pb2_A 197 VMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDILT--SAKAL 272 (420)
T ss_dssp HCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGG
T ss_pred Hhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeEE--ecccc
Confidence 9986 899999875444 22 4578999999999999999999984 433222100 0 001 268774 57999
Q ss_pred CCC-ceEEEEEeCCchhhh
Q 022564 261 RGP-RGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~gp-~gG~l~~~~~~~~~~ 278 (295)
+++ +.|++++++++.+..
T Consensus 273 ~~G~~iG~~~~~~~l~~~l 291 (420)
T 2pb2_A 273 GGGFPVSAMLTTQEIASAF 291 (420)
T ss_dssp GTTSCCEEEEECHHHHTTC
T ss_pred cCCCceEEEEEhHHHHHhh
Confidence 753 348999988765543
No 211
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.50 E-value=4.7e-13 Score=124.12 Aligned_cols=207 Identities=11% Similarity=-0.046 Sum_probs=124.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|.+++++.+.+.+.. ..+.. ..+..+...+++++++++++.+.+ .|++++|++ |+.+++.++.
T Consensus 68 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~gGseA~~~al~~~~~~~ 136 (460)
T 3gju_A 68 GRQKIADAIATQAKNLA-YYHAY------VGHGTEASITLAKMIIDRAPKGMS----RVYFGLSGSDANETNIKLIWYYN 136 (460)
T ss_dssp CCHHHHHHHHHHHHHHS-CCCCC------TTCCCHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHhhCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998876521 11111 011223455567888888877665 788888888 8887887775
Q ss_pred -----CCCCeEEEecCCCCcccCcccc-----ccccccccceeeeEEEeeec--CCCCCCCC--------HHHHHHHHhh
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~--~~~~~~id--------~e~l~~~i~~ 193 (295)
.++++|++.++.|.+....... .++.........+..++++. ..++...+ +++|+++++.
T Consensus 137 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~ 216 (460)
T 3gju_A 137 NVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILA 216 (460)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHh
Confidence 3579999999888665321110 01101011111133344332 11112233 6889988863
Q ss_pred ---cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCCC
Q 022564 194 ---FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 194 ---~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~ 261 (295)
.++++|++.+.++ |...+ +++|.++|++||+++|+|++|+ +|-.... ....+ ...|++++ .|+++
T Consensus 217 ~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~-~~pdi~t~--sK~l~ 293 (460)
T 3gju_A 217 EGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYG-IKPDLITI--AKGLT 293 (460)
T ss_dssp HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHT-CCCSEEEE--CGGGT
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcC-CCCCeeee--ehhhc
Confidence 3567777764444 23344 9999999999999999999987 3211100 00000 02577765 49997
Q ss_pred C--CceEEEEEeCCchhhh
Q 022564 262 G--PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 262 g--p~gG~l~~~~~~~~~~ 278 (295)
| .+.|++++++++.+..
T Consensus 294 gG~~~lg~v~~~~~i~~~~ 312 (460)
T 3gju_A 294 SAYAPLSGVIVADRVWQVL 312 (460)
T ss_dssp TTSSCCEEEEEEHHHHHHH
T ss_pred CCCCCeEEEEECHHHHHHH
Confidence 7 4558999998876544
No 212
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.49 E-value=7.2e-13 Score=121.70 Aligned_cols=202 Identities=13% Similarity=0.060 Sum_probs=121.7
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++.++.. ..+|++.+++.+.+.+....+++ .....++++.++++++ +.+ .|++++|
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~-~~~----~v~~~~s 119 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTP-----------TALEVKFAKMLKEAMP-ALD----KVRFVNS 119 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSC-----------CHHHHHHHHHHHHHCT-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCC-----------CHHHHHHHHHHHHhCC-CCC----EEEEeCc
Confidence 4466554432 25899999999988662211111 1233345678888887 454 7888888
Q ss_pred hH-HHHHHHHhhcC--CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCC-------------CCHH
Q 022564 122 SP-SNFQVYTALLK--PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGY-------------IDYD 185 (295)
Q Consensus 122 ~~-a~~~~~~al~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-------------id~e 185 (295)
++ ++..++..+.. ++++|+++++.|.+....... ..|........+.. .+. .|++
T Consensus 120 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~-------~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 190 (434)
T 3l44_A 120 GTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLV-------AAGSGPSTLGTPDS--AGVPQSIAQEVITVPFNNVE 190 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGB-------C-------CCCBSS--TTCCHHHHTTEEEECTTCHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHh-------hcCCcccccCCCCc--CCCCCcCCCceEecCcccHH
Confidence 77 88877776643 789999999877665322111 11100000000000 000 1899
Q ss_pred HHHHHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCCC----CCCCcceEEE
Q 022564 186 QLEKSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIP----SPFEYADVVT 253 (295)
Q Consensus 186 ~l~~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~----~~~~~~D~~~ 253 (295)
++++++++ .++++|++++.|+ |...+ +++|.++|++||+++|+|++|. |. ..+... .+ ...|+++
T Consensus 191 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~-~~~di~t 267 (434)
T 3l44_A 191 TLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLG-VTPDLTA 267 (434)
T ss_dssp HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHT-CCCSEEE
T ss_pred HHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcC-CCCCeee
Confidence 99999873 2566777764444 34565 9999999999999999999985 22 211100 00 0256665
Q ss_pred eCCCCCCCCCce-EEEEEeCCchhhh
Q 022564 254 TTTHKSLRGPRG-AMIFFRKGVKEIN 278 (295)
Q Consensus 254 ~s~~K~l~gp~g-G~l~~~~~~~~~~ 278 (295)
+ +|.++++-. |++++++++.+..
T Consensus 268 ~--sK~~~~G~~iG~~~~~~~i~~~~ 291 (434)
T 3l44_A 268 L--GKVIGGGLPIGAYGGKKEIMEQV 291 (434)
T ss_dssp E--EGGGGTTSSCEEEEECHHHHTTB
T ss_pred h--hhhhcCCcCeeeEEEcHHHHHhh
Confidence 4 598865433 8889988876544
No 213
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.48 E-value=2.2e-12 Score=119.18 Aligned_cols=203 Identities=10% Similarity=0.022 Sum_probs=122.2
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|++.+++.+.+.+.. + ... .+..+...+++++++++++.+. .|++++|++ ++..++..+.
T Consensus 66 ~~p~v~~A~~~~~~~~~---~-~~~-----~~~~~~~~~la~~l~~~~~~~~-----~v~~~~ggseA~~~al~~~~~~~ 131 (452)
T 3n5m_A 66 GRKELAEAAYKQLQTLS---Y-FPM-----SQSHEPAIKLAEKLNEWLGGEY-----VIFFSNSGSEANETAFKIARQYY 131 (452)
T ss_dssp CCHHHHHHHHHHHTTCC---C-CCT-----TSEEHHHHHHHHHHHHHHTSCE-----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC---C-ccc-----ccCCHHHHHHHHHHHHhCCCCc-----eEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999999886521 1 110 1123445557788988888654 588888888 8887777776
Q ss_pred --C---CCCeEEEecCCCCcccCccccc-----cccccccceeeeEEEeeecCCCCCC-CC---------HHHHHHHHh-
Q 022564 134 --K---PHDRIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRLNESTGY-ID---------YDQLEKSAT- 192 (295)
Q Consensus 134 --~---~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~v~~~~~~~~~~-id---------~e~l~~~i~- 192 (295)
. ++|+|++.++.|.+........ +.....-.......++.+.. -... -| +++|+++++
T Consensus 132 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (452)
T 3n5m_A 132 AQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC-YRMPGIERENIYDVECVKEVDRVMTW 210 (452)
T ss_dssp HTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT-TTSTTTTTSCGGGCHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc-ccCccCCchhhHHHHHHHHHHHHHHh
Confidence 5 7899999998887653111100 00000000001222322111 0000 12 899999997
Q ss_pred --hcCCcEEEEcCC--CCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCCC
Q 022564 193 --LFRPKLIVAGAS--AYARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 193 --~~~tk~i~l~~~--n~~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~ 261 (295)
..++++|+++++ |.|...+ +++|.++|++||+++|+|++|. +|..... ..... ...|++++ +|.++
T Consensus 211 ~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~-~~~di~t~--sK~l~ 287 (452)
T 3n5m_A 211 ELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYD-VKPDIITM--AKGIT 287 (452)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTT-CCCSEEEE--CGGGG
T ss_pred cCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcC-CCCCEEee--ccccc
Confidence 236778888744 5334555 9999999999999999999986 3211100 11111 02677765 59886
Q ss_pred CC--ceEEEEEeCCchhhh
Q 022564 262 GP--RGAMIFFRKGVKEIN 278 (295)
Q Consensus 262 gp--~gG~l~~~~~~~~~~ 278 (295)
+. +.|++++++++.+..
T Consensus 288 ~G~~~ig~~~~~~~i~~~~ 306 (452)
T 3n5m_A 288 SAYLPLSATAVKREIYEAF 306 (452)
T ss_dssp TTSSCCEEEEEEHHHHGGG
T ss_pred CCCcceEEEEECHHHHHHH
Confidence 43 339999999876654
No 214
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.48 E-value=2.4e-13 Score=126.08 Aligned_cols=206 Identities=12% Similarity=-0.030 Sum_probs=124.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|++++++.+.+.+.. ..+.. ..+..+...+++++++++++.+.+ .|++++|++ ++..++..+..
T Consensus 67 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~ggseA~~~al~~~~~~~ 135 (459)
T 4a6r_A 67 GRKDFAEAARRQMEELP-FYNTF------FKTTHPAVVELSSLLAEVTPAGFD----RVFYTNSGSESVDTMIRMVRRYW 135 (459)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCTT------SSSCCHHHHHHHHHHHHHSCTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999999886521 11111 111234455577899999988776 789988888 88878877764
Q ss_pred ------CCCeEEEecCCCCcccCcccc-----ccccccccceeeeEEEeeec--CCCCCCCC--------HHHHHHHHhh
Q 022564 135 ------PHDRIMALDLPHGGHLSHGYQ-----TDTKKISAVSIFFETMPYRL--NESTGYID--------YDQLEKSATL 193 (295)
Q Consensus 135 ------~gd~Vl~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~v~~~~--~~~~~~id--------~e~l~~~i~~ 193 (295)
++++|++.++.|.+....... .++.........+..++++. ...++ .| +++|+++++.
T Consensus 136 ~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~ 214 (459)
T 4a6r_A 136 DVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILE 214 (459)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHH
Confidence 679999999888765311110 00000000111133343222 10112 45 7889998863
Q ss_pred ---cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCCC
Q 022564 194 ---FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLR 261 (295)
Q Consensus 194 ---~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l~ 261 (295)
.++++|++.+.++ |...+ +++|.++|++||+++|+|++|. +|-.... ....+ ...|++++| |+++
T Consensus 215 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~-~~pdi~t~s--K~l~ 291 (459)
T 4a6r_A 215 IGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFG-FQPDLFTAA--KGLS 291 (459)
T ss_dssp HCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHT-CCCSEEEEC--GGGG
T ss_pred cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcC-CCCCeeehh--hhhc
Confidence 2566677654333 34455 9999999999999999999986 2211100 00000 026777664 9886
Q ss_pred C--CceEEEEEeCCchhhh
Q 022564 262 G--PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 262 g--p~gG~l~~~~~~~~~~ 278 (295)
| .+-|++++++++.+..
T Consensus 292 gg~~~lg~v~~~~~i~~~~ 310 (459)
T 4a6r_A 292 SGYLPIGAVFVGKRVAEGL 310 (459)
T ss_dssp TTSSCCEEEEECHHHHHHH
T ss_pred CCCCCccceeeCHHHHHHh
Confidence 6 3458999988876543
No 215
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.47 E-value=1.6e-12 Score=119.38 Aligned_cols=205 Identities=13% Similarity=0.093 Sum_probs=124.8
Q ss_pred cCceecCCC---C--CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSE---N--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~---~--~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..|++..+. + ..+|++.+++.+.+.+....+ + ..++..+++++++++++ ..+ .|++++|
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~------~-----~~~~~~~l~~~la~~~~-~~~----~v~~~~s 120 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYG------A-----PGEAEVLLAEKILGYVK-RGG----MIRFVNS 120 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCS------S-----CCHHHHHHHHHHHHHHC-TTC----EEEEESS
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCC------C-----CCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 456776553 1 268999999999886621111 1 12344456688888875 344 7888888
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccc------cccceee----eEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++.+++.+. +.++++|+++++.|.+............ ....|.. ...++++. .|+++++
T Consensus 121 gseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le 194 (434)
T 2epj_A 121 GTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALE 194 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHH
Confidence 88 888777662 3456788888877766533221100000 0001110 01122222 3899999
Q ss_pred HHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCC
Q 022564 189 KSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTT 256 (295)
Q Consensus 189 ~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~ 256 (295)
+++++ .++++|++.+.++ |...+ +++|.++|++||+++|+|++|+ |. ..+.. ..+ ...|++ ++
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~--s~ 269 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFN-IEGDII--VL 269 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHT-CCCSEE--EE
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhC-CCCCee--ee
Confidence 99974 2677777764332 56677 9999999999999999999997 44 21110 000 026776 44
Q ss_pred CCCCCC-CceEEEEEeCCchhhh
Q 022564 257 HKSLRG-PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~ 278 (295)
+|+|++ .+.|++++++++.+..
T Consensus 270 sK~l~~G~~~G~v~~~~~~~~~l 292 (434)
T 2epj_A 270 GKIIGGGFPVGAVAGSREVMSLL 292 (434)
T ss_dssp EGGGGTTSSCEEEEECHHHHTTB
T ss_pred cchhcCCcceeeeeecHHHHHhh
Confidence 699865 3569999998766543
No 216
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.47 E-value=9.6e-13 Score=120.78 Aligned_cols=204 Identities=12% Similarity=0.030 Sum_probs=123.0
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc--C
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--K 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--~ 134 (295)
.+|++.+++.+.+.+.. +... .|. .....++++.++++++++.+ +|++++|++ ++..++..+. .
T Consensus 60 ~~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~a~~~~~~~~ 126 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKLD---HLFS-EML-----SRPVVDLATRLANITPPGLD----RALLLSTGAESNEAAIRMAKLVT 126 (433)
T ss_dssp TCHHHHHHHHHHHHHCC---CCCT-TCC-----CHHHHHHHHHHHHHSCTTCC----EEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCc---cccc-ccC-----CHHHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 48999999999886521 1111 111 13344566888999988765 899998888 8887776543 3
Q ss_pred CCCeEEEecCCCCcccCccccc----ccc--ccccceeeeEEEeeecCCC-CC--------CCCHHHHHHHHhh---cCC
Q 022564 135 PHDRIMALDLPHGGHLSHGYQT----DTK--KISAVSIFFETMPYRLNES-TG--------YIDYDQLEKSATL---FRP 196 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~----~~~--~~~~~g~~~~~v~~~~~~~-~~--------~id~e~l~~~i~~---~~t 196 (295)
.+|+|++.++.|.+........ +.. .....+ +..++++.... .+ .+|++++++++++ .++
T Consensus 127 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (433)
T 1zod_A 127 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL 204 (433)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCe
Confidence 4689999998776543211000 000 011123 33344321100 11 2469999999974 356
Q ss_pred cEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccCCCCCCC--CcceEEEeCCCCCCCCC-ceE
Q 022564 197 KLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAGVIPSPF--EYADVVTTTTHKSLRGP-RGA 266 (295)
Q Consensus 197 k~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~~~~~~~--~~~D~~~~s~~K~l~gp-~gG 266 (295)
++|++++.++ |...+ +++|.++|++||+++|+|++|+ +|.... ...... ...|++ ++.|+|+++ +.|
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~-~~~~~~~~~~~di~--s~sK~~~~G~~ig 281 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT-MFACQRDGVTPDIL--TLSKTLGAGLPLA 281 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHTCCCSEE--EECHHHHTTSSCE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch-HhHHhhcCCCCCEE--EecccccCCCCee
Confidence 7777664433 44555 9999999999999999999987 332111 000000 025665 455988653 339
Q ss_pred EEEEeCCchhhhc
Q 022564 267 MIFFRKGVKEINK 279 (295)
Q Consensus 267 ~l~~~~~~~~~~~ 279 (295)
++++++++.+...
T Consensus 282 ~~~~~~~~~~~~~ 294 (433)
T 1zod_A 282 AIVTSAAIEERAH 294 (433)
T ss_dssp EEEECHHHHHHHH
T ss_pred EEEEhHHHHHhhc
Confidence 9999988765443
No 217
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.47 E-value=1.3e-12 Score=119.64 Aligned_cols=206 Identities=12% Similarity=0.096 Sum_probs=124.4
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+.. ..+|.+.+++.+.+.... . |+. ......+++++++++++ +++ .|++++|
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~------~~~---~~~~~~~la~~l~~~~~-~~~----~v~~~~g 116 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--S------FGA---PCALENVLAEMVNDAVP-SIE----MVRFVNS 116 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--C------CSS---CCHHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--C------cCC---CCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 4566655532 258999999999886521 1 111 12445556788999887 554 7888888
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCcccccccccccc------ceee----eEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISA------VSIF----FETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~------~g~~----~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++..++... ...+++|++.++.|.+............... .+.. ...+.++. -|+++++
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le 190 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------NDLEAVK 190 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC------CCHHHHH
Confidence 88 877666332 2345789998877766432211110000000 0000 00111111 1899999
Q ss_pred HHHhhc--CCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCC
Q 022564 189 KSATLF--RPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTT 256 (295)
Q Consensus 189 ~~i~~~--~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~ 256 (295)
+++++. ++++|++++.++ |...+ +++|.++|++||+++|+|++|+ |. ..+. .... ...|++++|
T Consensus 191 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~-~~~di~t~s- 266 (427)
T 3fq8_A 191 ALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFG-VTPDLTTLG- 266 (427)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTT-CCCSEEEEC-
T ss_pred HHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcC-CCCChhhhh-
Confidence 999753 567777764333 45666 9999999999999999999986 43 2111 0011 025776655
Q ss_pred CCCCCC-CceEEEEEeCCchhhhc
Q 022564 257 HKSLRG-PRGAMIFFRKGVKEINK 279 (295)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~ 279 (295)
|+|++ .+.|++++++++.+...
T Consensus 267 -K~~~~G~~~G~~~~~~~~~~~~~ 289 (427)
T 3fq8_A 267 -KIIGGGLPVGAYGGKREIMQLVA 289 (427)
T ss_dssp -GGGGTTSSCEEEEECHHHHTTBT
T ss_pred -hhhhCCcceEEEEEcHHHHHhhc
Confidence 99864 34599999888765543
No 218
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.47 E-value=7.8e-13 Score=122.24 Aligned_cols=206 Identities=12% Similarity=0.082 Sum_probs=122.7
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
..|++..+.. ..+|.+.+++.+.+.+.. . ++ +..+++.+++++++++++ +.+ .|++++|
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~------~~---~~~~~~~~la~~l~~~~~-~~~----~v~~~~g 121 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--Q------YA---ASHPLEVRWAERIVAAFP-SIR----KLRFTGS 121 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--S------SC---SSCHHHHHHHHHHHHHCT-TCS----EEEEESC
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--C------CC---CCCHHHHHHHHHHHhhCC-CCC----EEEEeCC
Confidence 3567765632 368999999999886521 1 11 124567778899998886 554 7888888
Q ss_pred hH-HHHHHHHh---hcCCCCeEEEecCCCCcccCcccccccc--c-cccceeee----EEEeeecCCCCCCCCHHHHHHH
Q 022564 122 SP-SNFQVYTA---LLKPHDRIMALDLPHGGHLSHGYQTDTK--K-ISAVSIFF----ETMPYRLNESTGYIDYDQLEKS 190 (295)
Q Consensus 122 ~~-a~~~~~~a---l~~~gd~Vl~~~~~~~~~~~~~~~~~~~--~-~~~~g~~~----~~v~~~~~~~~~~id~e~l~~~ 190 (295)
++ |+.+++.+ +.+ +++|++.++.|.+........... . ....|... ..+.++. .|+++++++
T Consensus 122 g~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~d~~~le~~ 194 (453)
T 2cy8_A 122 GTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------DDIEGMREV 194 (453)
T ss_dssp HHHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------CCHHHHHHH
Confidence 88 88877776 555 467888887776543321110000 0 00012100 0122111 389999999
Q ss_pred Hhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCCCC
Q 022564 191 ATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHK 258 (295)
Q Consensus 191 i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~~K 258 (295)
+++ .++++|++++.++ |...+ +++|.++|++||+++|+|++|+ |. ..+.. ..+ ...|++ +++|
T Consensus 195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~--s~sK 269 (453)
T 2cy8_A 195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLD-VQPDLT--CLAK 269 (453)
T ss_dssp HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHT-CCCSEE--EEEG
T ss_pred HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhC-CCCcEE--EECh
Confidence 974 2677777764333 45666 9999999999999999999997 54 22210 001 025766 4559
Q ss_pred CCCC-CceEEEEEeCCchhhhcc
Q 022564 259 SLRG-PRGAMIFFRKGVKEINKQ 280 (295)
Q Consensus 259 ~l~g-p~gG~l~~~~~~~~~~~~ 280 (295)
+|++ .+.|++++++++.+....
T Consensus 270 ~l~~G~~~G~v~~~~~~~~~l~~ 292 (453)
T 2cy8_A 270 ASAGGLPGGILGGREDVMGVLSR 292 (453)
T ss_dssp GGGTTSSCEEEEECHHHHTTSSS
T ss_pred hhhCCcceEEEechHHHHHHhcc
Confidence 9975 456999999887654433
No 219
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.45 E-value=2.3e-13 Score=126.16 Aligned_cols=205 Identities=13% Similarity=0.048 Sum_probs=123.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|++.+++.+.+.+.. ..... .+..+...+++++++++++.+.+ .|++++|++ |+..++..+..
T Consensus 92 ~~p~v~~A~~~~~~~~~-~~~~~-------~~~~~~~~~L~e~la~~~~~~~~----~v~~~~sGseA~~~Alk~a~~~~ 159 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMN-HVMFG-------GLTHEPAARLAKLLVDITPAGLD----TVFFSDSGSVSVEVAAKMALQYW 159 (457)
T ss_dssp TCHHHHHHHHHHHHHCS-CCCSS-------SEECHHHHHHHHHHHHHSSTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-Ccccc-------ccCCHHHHHHHHHHHHhCCCCcC----EEEEeCcHHHHHHHHHHHHHHHH
Confidence 58999999999886521 11100 11123444577999999987665 788888888 88877777653
Q ss_pred -----CC-CeEEEecCCCCcccCccccc------cccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCCcEEE
Q 022564 135 -----PH-DRIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRPKLIV 200 (295)
Q Consensus 135 -----~g-d~Vl~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~tk~i~ 200 (295)
+| ++|++.++.|.+........ +.............++++.+ .....|+++|++++++ .++++|+
T Consensus 160 ~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi 238 (457)
T 3tfu_A 160 RGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVV 238 (457)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEE
T ss_pred HhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEE
Confidence 55 58888887776543111100 00000000111333443322 1123589999999973 2677888
Q ss_pred EcC-CCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CCCC-C-CcceEEEeCCCCCCCC--CceEEE
Q 022564 201 AGA-SAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IPSP-F-EYADVVTTTTHKSLRG--PRGAMI 268 (295)
Q Consensus 201 l~~-~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~~~-~-~~~D~~~~s~~K~l~g--p~gG~l 268 (295)
+.+ .++ |...+ +++|.++|++||+++|+|+++. |....+. .... + ...|++ ++.|.++| ++.|++
T Consensus 239 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~gr~G~~~a~~~~~~~pdii--t~sK~l~gG~~~lG~v 315 (457)
T 3tfu_A 239 VEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIAT-GFGRTGALFAADHAGVSPDIM--CVGKALTGGYLSLAAT 315 (457)
T ss_dssp ECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred EeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCcc-CCccccchhHhHhcCCCceEE--EEChhhhCCCcceEEE
Confidence 765 444 34443 9999999999999999999975 2211111 0000 0 026777 55699977 466999
Q ss_pred EEeCCchhhh
Q 022564 269 FFRKGVKEIN 278 (295)
Q Consensus 269 ~~~~~~~~~~ 278 (295)
++++++.+..
T Consensus 316 ~~~~~i~~~~ 325 (457)
T 3tfu_A 316 LCTADVAHTI 325 (457)
T ss_dssp EEEHHHHHHH
T ss_pred EEcHHHHHHh
Confidence 9998876654
No 220
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.45 E-value=3.7e-12 Score=118.68 Aligned_cols=205 Identities=10% Similarity=0.013 Sum_probs=123.7
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
.+|++.+++.+.+.+ ...++.. .+..+...+++++++++++.+.+ .|++++|++ |+..++..+.
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~-------~~~~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~Aik~a~~~~ 138 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW-------YMATSPAARLAEKIATLTPGDLN----RIFFTTGGSTAVDSALRFSEFYN 138 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT-------TCBCHHHHHHHHHHHTTSSTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC-------ccCCHHHHHHHHHHHhcCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 589999999998865 2111111 11234445577899998876665 788888877 8887777764
Q ss_pred -----CCCCeEEEecCCCCcccCccc-----cccccc--cccceeeeEEEeeecCCCCCCCC--------HHHHHHHHhh
Q 022564 134 -----KPHDRIMALDLPHGGHLSHGY-----QTDTKK--ISAVSIFFETMPYRLNESTGYID--------YDQLEKSATL 193 (295)
Q Consensus 134 -----~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~--~~~~g~~~~~v~~~~~~~~~~id--------~e~l~~~i~~ 193 (295)
..+++|++.++.|.+...... ..++.. ....+ +..++++.....+..| +++|+++++.
T Consensus 139 ~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~ 216 (476)
T 3i5t_A 139 NVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDR--ISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES 216 (476)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTT--EEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCC--cEEeCCCcccccCCCchHHHHHHHHHHHHHHHHh
Confidence 346799999988876542111 011100 00112 2233332211111222 7899998863
Q ss_pred ---cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc--CCC-CCCCCcceEEEeCCCCCC
Q 022564 194 ---FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA--GVI-PSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 194 ---~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~--~~~-~~~~~~~D~~~~s~~K~l 260 (295)
.++++|++.+.++ |...+ +++|.++|++||+++|+|++|+ +|-... ... ..++ ..|++++| |++
T Consensus 217 ~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l 293 (476)
T 3i5t_A 217 LGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGV 293 (476)
T ss_dssp HCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGG
T ss_pred cCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhh
Confidence 3567787764433 33344 9999999999999999999986 221110 001 1111 26787655 998
Q ss_pred CC--CceEEEEEeCCchhhhc
Q 022564 261 RG--PRGAMIFFRKGVKEINK 279 (295)
Q Consensus 261 ~g--p~gG~l~~~~~~~~~~~ 279 (295)
+| .+-|++++++++.+...
T Consensus 294 ~~G~~plg~v~~~~~i~~~~~ 314 (476)
T 3i5t_A 294 TSGYVPLGGLAISEAVLARIS 314 (476)
T ss_dssp GTTSSCCEEEEECHHHHHTTS
T ss_pred cCCCcCeEEEEECHHHHHHHh
Confidence 76 34489999988766543
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.45 E-value=2e-12 Score=118.64 Aligned_cols=203 Identities=14% Similarity=0.061 Sum_probs=121.2
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++.++.. ..+|++.+++.+.+.+....+++ . ....++++.++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~----~~~~~l~~~la~~~~-~~~----~v~~~~~ 117 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAP-------T----EIENKLAKLVIERVP-SIE----IVRMVNS 117 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSC-------C----HHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCC-------C----HHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 4566655432 25899999999988762211111 1 222335578888886 444 7888888
Q ss_pred hH-HHHHHHHhhc--CCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCC------------CCCHHH
Q 022564 122 SP-SNFQVYTALL--KPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTG------------YIDYDQ 186 (295)
Q Consensus 122 ~~-a~~~~~~al~--~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~------------~id~e~ 186 (295)
++ ++..++..+. .++++|++.++.|.+....... ..|.......++.. ... .-|+++
T Consensus 118 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~-------~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 118 GTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLI-------KAGSGVATLGLPDS-PGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCS-------SCCTTC-----CCC-TTCCHHHHTTEEEEETTCHHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHH-------hcCCcccccCCCCc-CCCCCcccCceeecCCCCHHH
Confidence 77 8887776664 3678999988777655322111 01100000110000 000 018999
Q ss_pred HHHHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEe
Q 022564 187 LEKSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTT 254 (295)
Q Consensus 187 l~~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~ 254 (295)
+++++++ .++++|++.+.++ |...+ +++|.++|++||+++|+|++|. |. ..+.. ..+ ...|+++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~-~~~di~t- 265 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYG-VTPDLTC- 265 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHT-CCCSEEE-
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhC-CCCceeh-
Confidence 9999873 2566777754333 45666 9999999999999999999984 33 22110 000 0256665
Q ss_pred CCCCCCCC-CceEEEEEeCCchhhh
Q 022564 255 TTHKSLRG-PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 255 s~~K~l~g-p~gG~l~~~~~~~~~~ 278 (295)
++|+|++ .+.|++++++++.+..
T Consensus 266 -~sK~~~~G~~iG~~~~~~~~~~~~ 289 (429)
T 3k28_A 266 -LGKVIGGGLPVGAYGGKAEIMRQV 289 (429)
T ss_dssp -ECGGGGTTSCCEEEEECHHHHTTB
T ss_pred -hhhhhcCCCCeEEEEEcHHHHhhh
Confidence 4598865 3449999998876544
No 222
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.44 E-value=2.8e-12 Score=117.60 Aligned_cols=206 Identities=14% Similarity=0.117 Sum_probs=119.6
Q ss_pred cCceecCCCC-----CCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~~-----~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.+++.++.. ..+|++.+++.+.+.+....+++ .....+++++++++++ ..+ .+++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-----------~~~~~~la~~l~~~~~-~~~----~v~~~~s 117 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAP-----------TEMEVKMAQLVTDLVP-TMD----MVRMVNS 117 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSC-----------CHHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCC-----------CHHHHHHHHHHHhhCC-CCC----EEEEeCc
Confidence 4466654432 25899999999988663211111 1333446688888887 444 7888888
Q ss_pred hH-HHHHHHHhh--cCCCCeEEEecCCCCcccCcccccccccc------cccee----eeEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKI------SAVSI----FFETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~------~~~g~----~~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++..++... ..+++.|++.+..|.+...........+. ...+. ......++ ..|+++++
T Consensus 118 Gsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le 191 (429)
T 4e77_A 118 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVR 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEEC------TTCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHH
Confidence 88 877676643 24677898888777655321100000000 00000 00001111 12899999
Q ss_pred HHHhhc--CCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-C---CCCCCcceEEEeCC
Q 022564 189 KSATLF--RPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-I---PSPFEYADVVTTTT 256 (295)
Q Consensus 189 ~~i~~~--~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~---~~~~~~~D~~~~s~ 256 (295)
+++++. ++++|++.+.++ |...+ +++|.++|++||+++|+|++|+ |. ..+. . ..+ ...|++++
T Consensus 192 ~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~-~~pdi~t~-- 266 (429)
T 4e77_A 192 QAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYH-VIPDLTCL-- 266 (429)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTT-CCCSEEEE--
T ss_pred HHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcC-CCCCeeee--
Confidence 999742 456666654333 45555 9999999999999999999987 33 2111 0 011 02577644
Q ss_pred CCCCCC-CceEEEEEeCCchhhhc
Q 022564 257 HKSLRG-PRGAMIFFRKGVKEINK 279 (295)
Q Consensus 257 ~K~l~g-p~gG~l~~~~~~~~~~~ 279 (295)
+|+|++ .+.|++++++++.+...
T Consensus 267 sK~~~~G~~~G~~~~~~~~~~~l~ 290 (429)
T 4e77_A 267 GKIIGGGMPVGAFGGRREVMNALA 290 (429)
T ss_dssp EGGGGTTSCCEEEEECHHHHTTBT
T ss_pred cccccCCCCeEEEEECHHHHHHhc
Confidence 598864 34599999988766543
No 223
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.43 E-value=1.4e-13 Score=125.05 Aligned_cols=197 Identities=11% Similarity=-0.010 Sum_probs=117.3
Q ss_pred cCceecCCCCCC--CHHHHHHHhhhhhccCCCCCCCCcccCCcchH-----HHHHHHHHHHHHHHcCC--CCCCcceeEE
Q 022564 47 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-----DMAESLCQKRALEAFRL--DPEKWGVNVQ 117 (295)
Q Consensus 47 ~~i~L~~~~~~~--~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~-----~~l~~~~~~~la~~~g~--~~~~~~~~v~ 117 (295)
+.|+|..+++.. ++.+.+++.+..... .......|+...+. .++++++.+++. ..|. ++++ +|+
T Consensus 23 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~---~i~ 95 (391)
T 3bwn_A 23 FVVNLDHGDPTAYEEYWRKMGDRCTVTIR---GCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDR---YIV 95 (391)
T ss_dssp SCEECSSCCCGGGHHHHHHTGGGSCEEEC---TTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSS---EEE
T ss_pred CeeEcCCCCCCCCCCHHHHHhHHHHhhcC---ccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCC---eEE
Confidence 468898887642 334555443322110 11112234444555 788877777765 3454 3322 899
Q ss_pred eCCChH-HHHHHHHhhcCCCC----eEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHh
Q 022564 118 SLSGSP-SNFQVYTALLKPHD----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (295)
Q Consensus 118 ~~sG~~-a~~~~~~al~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~ 192 (295)
+|+|++ ++..++.+++++|| +|++++|.|+++.. .+...|.++..++ .+.++.. .
T Consensus 96 ~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~--~d~~~l~----------~ 155 (391)
T 3bwn_A 96 VGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVRSGMYKWE--GDAWGFD----------K 155 (391)
T ss_dssp EEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTCBTTEEEE--EESTTCC----------C
T ss_pred EeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcCCeEEEec--CCHHHcC----------C
Confidence 999999 88878899999999 99999977766543 3335565554454 4422221 1
Q ss_pred hcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCC--CCceEEE
Q 022564 193 LFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR--GPRGAMI 268 (295)
Q Consensus 193 ~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~--gp~gG~l 268 (295)
+ ++|+|+++++||| ...+ +|++.++.++++||+|++|+.+... .+.. ..+.++++.|++|+|+ |.+-|++
T Consensus 156 ~-~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~-~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~ 229 (391)
T 3bwn_A 156 K-GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYT-PITR--RQDHDIMLFTFSKITGHAGSRIGWA 229 (391)
T ss_dssp C-SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTS-CCCC--CBCCSEEEEEHHHHHSCGGGCEEEE
T ss_pred C-CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCC-cccc--CCCCeEEEEechhhcCCCccceEEE
Confidence 3 7899988866664 4443 4444222233999999998742111 1110 1247799999999874 3344999
Q ss_pred EE-eCCchh
Q 022564 269 FF-RKGVKE 276 (295)
Q Consensus 269 ~~-~~~~~~ 276 (295)
++ ++++.+
T Consensus 230 ~~~~~~l~~ 238 (391)
T 3bwn_A 230 LVKDKEVAK 238 (391)
T ss_dssp EECCHHHHH
T ss_pred EecCHHHHH
Confidence 97 655543
No 224
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.43 E-value=2.4e-12 Score=118.88 Aligned_cols=204 Identities=8% Similarity=0.015 Sum_probs=115.9
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|++.+++.+.+.+. ..... ..+..+...+++++++++++.+.+ .|++++|++ |+..++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~-~~~~~-------~~~~~~~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~al~~~~~~~ 128 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI-AHSTL-------LGMTNVPATQLAETLIDISPKKLT----RVFYSDSGAEAMEIALKMAFQYW 128 (448)
T ss_dssp SCHHHHHHHHHHHTTC-SCCCC-------SSSEEHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCccc-------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 4799999999988652 11111 111223445577899999876654 788888888 88877777754
Q ss_pred --C----CCeEEEecCCCCcccCcccccccc-----ccccceeeeEEEeeecCCCCCCC-----------CHHHHHHHHh
Q 022564 135 --P----HDRIMALDLPHGGHLSHGYQTDTK-----KISAVSIFFETMPYRLNESTGYI-----------DYDQLEKSAT 192 (295)
Q Consensus 135 --~----gd~Vl~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~~~v~~~~~~~~~~i-----------d~e~l~~~i~ 192 (295)
+ +|+|+++++.|.+........... ........+..++.+ ..+.. |+++|+++++
T Consensus 129 ~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~le~~l~ 205 (448)
T 3dod_A 129 KNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRELAQLLE 205 (448)
T ss_dssp HHTTCTTCCEEEEEC-----------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHHHHHHHH
Confidence 4 499999998876653211111000 000000012223221 12222 4899999987
Q ss_pred --hcCCcEEEEcCC--CC-CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCC
Q 022564 193 --LFRPKLIVAGAS--AY-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 --~~~tk~i~l~~~--n~-~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l 260 (295)
..++++|++.+. ++ |...+ +++|.++|++||+++|+|++|+ +|..... ....++ ..|++++ .|++
T Consensus 206 ~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~--sK~l 282 (448)
T 3dod_A 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAA--GKGI 282 (448)
T ss_dssp HHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGG
T ss_pred hCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEe--cccc
Confidence 225677777643 33 44444 9999999999999999999986 3211110 000110 2677765 4998
Q ss_pred CCC--ceEEEEEeCCchhhhc
Q 022564 261 RGP--RGAMIFFRKGVKEINK 279 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~~~ 279 (295)
++. +.|++++++++.+...
T Consensus 283 ~~G~~~ig~v~~~~~~~~~~~ 303 (448)
T 3dod_A 283 TGGYLPIAVTFATEDIYKAFY 303 (448)
T ss_dssp GTTSSCCEEEEEEHHHHHTTC
T ss_pred cCCcCceEEEEECHHHHHHhh
Confidence 653 4489999988766543
No 225
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.43 E-value=5e-12 Score=115.77 Aligned_cols=205 Identities=15% Similarity=0.069 Sum_probs=124.5
Q ss_pred cCceecCCC-----CCCCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCC
Q 022564 47 KGLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSG 121 (295)
Q Consensus 47 ~~i~L~~~~-----~~~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG 121 (295)
+.|++..+. +..+|++.+++.+.+.+.. . ++. ..++..+++++++++++ +.+ .|++++|
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~------~~~---~~~~~~~l~~~l~~~~~-~~~----~v~~~~~ 116 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL--T------FGA---PSPLEVALAKKVKRAYP-FVD----LVRFVNS 116 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--C------CSS---CCHHHHHHHHHHHHHCT-TCC----EEEEESS
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--C------CCC---CCHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 356776553 2368999999999886521 1 111 12344556688888886 454 7888888
Q ss_pred hH-HHHHHHHh--hcCCCCeEEEecCCCCcccCccccccccc------cccceee----eEEEeeecCCCCCCCCHHHHH
Q 022564 122 SP-SNFQVYTA--LLKPHDRIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLNESTGYIDYDQLE 188 (295)
Q Consensus 122 ~~-a~~~~~~a--l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~------~~~~g~~----~~~v~~~~~~~~~~id~e~l~ 188 (295)
++ ++.+++.. .+.+++.|++.++.|.++........... ....|.. ...++++. .|+++++
T Consensus 117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le 190 (424)
T 2e7u_A 117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY------NDPEGLR 190 (424)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC------CCHHHHH
Confidence 77 88767765 23345788899887776533211100000 0011110 01122221 3899999
Q ss_pred HHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC----CCCCCcceEEEeCC
Q 022564 189 KSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI----PSPFEYADVVTTTT 256 (295)
Q Consensus 189 ~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~----~~~~~~~D~~~~s~ 256 (295)
+++++ .++++|++++.++ |...+ +++|.++ ++||+++|+|++|+ |. ..+.. ..+ ...|++ ++
T Consensus 191 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~-~~~di~--s~ 264 (424)
T 2e7u_A 191 EVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLG-LKPDLV--TL 264 (424)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHT-CCCSEE--EE
T ss_pred HHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhC-CCcchh--hh
Confidence 99873 2567777754332 55666 9999999 99999999999997 44 22210 000 025766 66
Q ss_pred CCCCCCC-ceEEEEEeCCchhhhc
Q 022564 257 HKSLRGP-RGAMIFFRKGVKEINK 279 (295)
Q Consensus 257 ~K~l~gp-~gG~l~~~~~~~~~~~ 279 (295)
+|+|++. +.|++++++++.+...
T Consensus 265 sK~l~~G~~~G~~~~~~~~~~~~~ 288 (424)
T 2e7u_A 265 GKILGGGLPAAAYAGRREIMEKVA 288 (424)
T ss_dssp CGGGGTTSSCEEEEECHHHHTTBT
T ss_pred hhhhhCCcceEEEEEcHHHHhhhc
Confidence 7999753 5599999988665433
No 226
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.41 E-value=1.5e-12 Score=120.38 Aligned_cols=198 Identities=10% Similarity=0.037 Sum_probs=116.5
Q ss_pred CCHHHH-H-HHhh---hhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcC-CCCCCcceeEEeCCChH-HHHHHHH
Q 022564 58 TSVSVM-Q-AVGS---VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFR-LDPEKWGVNVQSLSGSP-SNFQVYT 130 (295)
Q Consensus 58 ~~~~v~-~-al~~---~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g-~~~~~~~~~v~~~sG~~-a~~~~~~ 130 (295)
.+|++. + ++.+ .+.... .+. . .| ..+...++++.++++++ .+.+ +|++++|++ ++..++.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~~--~~~-~-~~-----~~~~~~~la~~la~~~~~~~~~----~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALNK--PSN-S-DV-----YSVAMARFVETFARVLGDPALP----HLFFVEGGALAVENALK 137 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTCC--CCT-T-TC-----CCHHHHHHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcC--CCC-c-cc-----CCHHHHHHHHHHHHhcCCCCCC----EEEEeCchHHHHHHHHH
Confidence 489999 8 9988 654421 111 1 11 12333446677888886 4454 788888888 8876665
Q ss_pred hhc---C-----------CCCeEEEecCCCCcccCccccccc------cccccceeeeEEEeeecCCC-CC--------C
Q 022564 131 ALL---K-----------PHDRIMALDLPHGGHLSHGYQTDT------KKISAVSIFFETMPYRLNES-TG--------Y 181 (295)
Q Consensus 131 al~---~-----------~gd~Vl~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~v~~~~~~~-~~--------~ 181 (295)
.+. . +||+|+++++.|.+.......... .+..-....+ ..++.+.. .. .
T Consensus 138 ~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~ 215 (449)
T 2cjg_A 138 AAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPR--IDAPYMRPGLDEPAMAALEA 215 (449)
T ss_dssp HHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCE--ECCCCCCTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCc--EEEcCCCchhhccccchhhH
Confidence 432 2 289999999888776443221111 0110000112 22223210 01 2
Q ss_pred CCHHHHHHHHhh--cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCCC-CCC-C-Ccce
Q 022564 182 IDYDQLEKSATL--FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVI-PSP-F-EYAD 250 (295)
Q Consensus 182 id~e~l~~~i~~--~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~-~~~-~-~~~D 250 (295)
.|+++|++++++ .++++|++++.++ |...+ +++|.++|++||+++|+|++|+ |....+.. ... + ...|
T Consensus 216 ~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~~d 294 (449)
T 2cjg_A 216 EALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTAWAYQQLDVAPD 294 (449)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSTHHHHTCCCS
T ss_pred HHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcceeecccCCCce
Confidence 466779998862 3678887765433 44566 9999999999999999999997 22111110 000 0 0267
Q ss_pred EEEeCCCCCCCCCceEEEEEeCCchh
Q 022564 251 VVTTTTHKSLRGPRGAMIFFRKGVKE 276 (295)
Q Consensus 251 ~~~~s~~K~l~gp~gG~l~~~~~~~~ 276 (295)
++++ .|+| | -|++++++++.+
T Consensus 295 i~t~--sK~l--~-iG~~~~~~~~~~ 315 (449)
T 2cjg_A 295 IVAF--GKKT--Q-VCGVMAGRRVDE 315 (449)
T ss_dssp EEEE--CGGG--S-SEEEEECGGGGG
T ss_pred EEEe--cCcc--c-EEEEEECHHHhh
Confidence 7755 5998 4 467778887765
No 227
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.40 E-value=2.5e-12 Score=119.71 Aligned_cols=204 Identities=12% Similarity=0.028 Sum_probs=123.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhcC--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALLK-- 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~~-- 134 (295)
.+|.+++++.+.+.+.. ..+.. ..+..+...++++.++++++.+.+ .|++++|++ |+..++..+..
T Consensus 72 ~~p~v~~A~~~~~~~~~-~~~~~------~~~~~~~~~~lae~l~~~~~~~~~----~v~~~~sGseA~~~aik~a~~~~ 140 (472)
T 3hmu_A 72 GRDELAEVAARQMRELP-YYNTF------FKTTHVPAIALAQKLAELAPGDLN----HVFFAGGGSEANDTNIRMVRTYW 140 (472)
T ss_dssp CCHHHHHHHHHHHHHCS-CCCSS------SSEECHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc-ccccc------cccCCHHHHHHHHHHHHhCCCCCC----EEEEeCCHHHHHHHHHHHHHHHH
Confidence 48999999999886521 11111 112234444567888888877664 788888888 88877777653
Q ss_pred ------CCCeEEEecCCCCcccCccccc-----ccccc-ccceeeeEEEeeec--CCCCCCCC--------HHHHHHHHh
Q 022564 135 ------PHDRIMALDLPHGGHLSHGYQT-----DTKKI-SAVSIFFETMPYRL--NESTGYID--------YDQLEKSAT 192 (295)
Q Consensus 135 ------~gd~Vl~~~~~~~~~~~~~~~~-----~~~~~-~~~g~~~~~v~~~~--~~~~~~id--------~e~l~~~i~ 192 (295)
++++|+++++.|.+........ ++... ...+ +..++++. ...++ .| +++|+++++
T Consensus 141 ~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~--~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~ 217 (472)
T 3hmu_A 141 QNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPD--VHHINQPNWWAEGGD-MDPEEFGLARARELEEAIL 217 (472)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSS--EEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCC--cEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHH
Confidence 5789999998776653211100 00000 0112 33344322 10111 34 788988886
Q ss_pred h---cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCCcceEEEeCCCCCC
Q 022564 193 L---FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~---~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~~~D~~~~s~~K~l 260 (295)
+ .++++|++.+.++ |...+ +++|.++|++||+++|+|++|. +|-.... ....+ ...|++++| |++
T Consensus 218 ~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~-v~pdi~t~s--K~l 294 (472)
T 3hmu_A 218 ELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMG-IRPHIMTIA--KGL 294 (472)
T ss_dssp HHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHT-CCCSEEEEC--GGG
T ss_pred hcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhC-CCCceeeec--hhh
Confidence 3 2567777764333 34555 9999999999999999999986 3211100 00000 026788765 998
Q ss_pred CC--CceEEEEEeCCchhhh
Q 022564 261 RG--PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 261 ~g--p~gG~l~~~~~~~~~~ 278 (295)
+| .+.|++++++++.+..
T Consensus 295 ~gg~~plG~v~~~~~i~~~~ 314 (472)
T 3hmu_A 295 SSGYAPIGGSIVCDEVAHVI 314 (472)
T ss_dssp TTTSSCCEEEEEEHHHHHHH
T ss_pred hcCCcceEEEEECHHHHHhc
Confidence 76 4558889998876654
No 228
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.37 E-value=3.4e-12 Score=118.10 Aligned_cols=205 Identities=10% Similarity=0.010 Sum_probs=117.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHHHhhc--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALL-- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~~al~-- 133 (295)
.+|.+.+++.+.+.... .+.. ..+..+...+++++++++++.+ .+ .|++++|++ |+..++..+.
T Consensus 81 ~~p~v~~A~~~~~~~~~--~~~~------~~~~~~~~~~la~~l~~~~~~~~~~----~v~~~~sGseA~~~alk~a~~~ 148 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFT--HTCF------MVTPYEQYVQVAELLNALTPGDHDK----RTALFNSGAEAVENAIKVARLA 148 (453)
T ss_dssp TCHHHHHHHHHHHHHCS--CCTT------TTSCCHHHHHHHHHHHHHSSCSSCE----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cccc------CcCCCHHHHHHHHHHHHhCCCCCCc----EEEEeCcHHHHHHHHHHHHHHh
Confidence 48999999999886521 1111 1122344455778899998754 33 788888888 8887776553
Q ss_pred CCCCeEEEecCCCCcccCcccc------ccccccccceeeeEEEeeecCC-CCCCCC--------HHHHHHHHhhcCCcE
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLNE-STGYID--------YDQLEKSATLFRPKL 198 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~~~-~~~~id--------~e~l~~~i~~~~tk~ 198 (295)
..+++|+++++.|.+....... .++.........+..++++... +.+..+ ++++++.+...++++
T Consensus 149 ~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aa 228 (453)
T 4ffc_A 149 TGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAA 228 (453)
T ss_dssp HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred cCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEE
Confidence 3568999999888765321110 0111111111123344443211 111222 456666664424455
Q ss_pred EEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC-CC---CCCCcceEEEeCCCCCCCC-CceEE
Q 022564 199 IVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV-IP---SPFEYADVVTTTTHKSLRG-PRGAM 267 (295)
Q Consensus 199 i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~-~~---~~~~~~D~~~~s~~K~l~g-p~gG~ 267 (295)
|++.+.++ |...+ +++|.++|++||+++|+|++|. |....+. .. .+ ...|++++ .|++++ .+.|+
T Consensus 229 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~a~~~~~-~~pdi~t~--sK~~~~G~~~G~ 304 (453)
T 4ffc_A 229 IIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQT-GFARTGAWFASEHEG-IVPDIVTM--AKGIAGGMPLSA 304 (453)
T ss_dssp EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHT-CCCSEEEE--CGGGGTTSSCEE
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcccccchhhhcC-CCcchHhh--hhhhcCCcCeEE
Confidence 55543333 34444 9999999999999999999985 2211111 00 00 02567665 498854 34489
Q ss_pred EEEeCCchhhh
Q 022564 268 IFFRKGVKEIN 278 (295)
Q Consensus 268 l~~~~~~~~~~ 278 (295)
+++++++.+..
T Consensus 305 ~~~~~~i~~~~ 315 (453)
T 4ffc_A 305 VTGRAELMDAV 315 (453)
T ss_dssp EEEEHHHHTTS
T ss_pred EEECHHHHhhh
Confidence 99998876543
No 229
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.37 E-value=9.3e-14 Score=127.74 Aligned_cols=194 Identities=9% Similarity=-0.101 Sum_probs=124.3
Q ss_pred cCceecCCCCC--CCHHHHHHHhhhhhccCCCCCCCCcccCCcc-h---HHHHHHHHHHHHHHHcC--CCCCCcceeEEe
Q 022564 47 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNE-Y---IDMAESLCQKRALEAFR--LDPEKWGVNVQS 118 (295)
Q Consensus 47 ~~i~L~~~~~~--~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~-~---~~~l~~~~~~~la~~~g--~~~~~~~~~v~~ 118 (295)
..|+|..+++. +++.+.+++.+.+....... ..|+... + ..++++++.+++.+..+ ++++ +|++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~----~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~----~iv~ 128 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHR----MSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR----YIVF 128 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTT----CSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC----EEEE
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCccc----ccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC----EEEE
Confidence 45788888874 34566777776663211111 0122223 3 57888888888776554 4565 8999
Q ss_pred CCChH-HHHHHHHhh--------cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHH
Q 022564 119 LSGSP-SNFQVYTAL--------LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEK 189 (295)
Q Consensus 119 ~sG~~-a~~~~~~al--------~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~ 189 (295)
|+|++ ++..++.++ +++||+|+++.|.|+++.. .+...|.++. . +.+|+++|++
T Consensus 129 t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~~~~--~-------~~~d~~~l~~ 191 (427)
T 2hox_A 129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE--------QTKYFDKKGY--V-------WAGNAANYVN 191 (427)
T ss_dssp ESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------HHHHSCBTTE--E-------EEEEGGGGTT
T ss_pred eCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------HHHHcCCeee--e-------ecCCHHHHHH
Confidence 99999 888889999 8999999999976655433 3334454332 1 3356778888
Q ss_pred HHhhcCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCCCCCCCC--ce
Q 022564 190 SATLFRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP--RG 265 (295)
Q Consensus 190 ~i~~~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~K~l~gp--~g 265 (295)
++++ ++|+|+++++||| ...+ + +++ ++..+.|+++...... ..... .+.+++++|++|.++.| +.
T Consensus 192 ~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s--~~~~~-~~~~i~~~S~SK~~g~~G~Ri 260 (427)
T 2hox_A 192 VSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYT--PIKYK-ADEDILLFTMSKFTGHSGSRF 260 (427)
T ss_dssp CSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTS--CCCSC-BCCSEEEEEHHHHTSCGGGCC
T ss_pred hhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCC--ccccC-CCceEEEEeChhcCCCCCceE
Confidence 7766 7899998866664 5566 3 333 5688999886421111 11111 24789999999987433 34
Q ss_pred EEEEEe-CCchh
Q 022564 266 AMIFFR-KGVKE 276 (295)
Q Consensus 266 G~l~~~-~~~~~ 276 (295)
|+++++ +++.+
T Consensus 261 G~~~~~~~~l~~ 272 (427)
T 2hox_A 261 GWALIKDESVYN 272 (427)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEEECCHHHHH
Confidence 999995 55543
No 230
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.35 E-value=1.5e-11 Score=113.63 Aligned_cols=205 Identities=11% Similarity=0.028 Sum_probs=116.5
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCC-CCCcceeEEeCCChH-HHHHHHHhhc--
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLD-PEKWGVNVQSLSGSP-SNFQVYTALL-- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~-~~~~~~~v~~~sG~~-a~~~~~~al~-- 133 (295)
.+|.+.+++.+.+.... .+. ...+..+...+++++++++++.+ .+ .|++++|++ |+.+++..+.
T Consensus 78 ~~p~v~~A~~~~~~~~~--~~~------~~~~~~~~~~~la~~l~~~~~~~~~~----~v~~~~sGseA~~~Alk~a~~~ 145 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDFT--HTC------FMVTPYEGYVAVCEQLNRLTPVRGDK----RSALFNSGSEAVENAVKIARSH 145 (451)
T ss_dssp TCHHHHHHHHHHHTTCS--CCT------TTTSCCHHHHHHHHHHHHHSSCCSSE----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--ccc------CCccCCHHHHHHHHHHHHhCCcCCCC----EEEEeCcHHHHHHHHHHHHHHh
Confidence 48999999999886521 111 11112244455778899888754 33 788888888 8887776654
Q ss_pred CCCCeEEEecCCCCcccCcccc------ccccccccceeeeEEEeeec---------CCCC-CCCCHHHHHHHHh----h
Q 022564 134 KPHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL---------NEST-GYIDYDQLEKSAT----L 193 (295)
Q Consensus 134 ~~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~---------~~~~-~~id~e~l~~~i~----~ 193 (295)
..+++|++.++.|.+....... .++.........+..++++. +.+. ...+++.+++.++ .
T Consensus 146 ~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~ 225 (451)
T 3oks_A 146 THKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGA 225 (451)
T ss_dssp HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCG
T ss_pred cCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCC
Confidence 3558899999887765421110 11111111111233444331 1000 0113555555554 2
Q ss_pred cCCcEEEEcCCCC--CCccC----HHHHHHHHHHcCCEEEEEccccccccccCC----CCCCCCcceEEEeCCCCCCCC-
Q 022564 194 FRPKLIVAGASAY--ARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGV----IPSPFEYADVVTTTTHKSLRG- 262 (295)
Q Consensus 194 ~~tk~i~l~~~n~--~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~----~~~~~~~~D~~~~s~~K~l~g- 262 (295)
.++++|++.+.++ |...+ +++|.++|++||+++|+|++|. |....+. ...+ ...|++++ .|+|++
T Consensus 226 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~-~~pdi~t~--sK~l~~G 301 (451)
T 3oks_A 226 DNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEG-IDPDLIVT--AKGIAGG 301 (451)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGT-CCCSEEEE--CGGGGTT
T ss_pred CCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcC-CCCCeeee--hhhhhCC
Confidence 2455666653333 34444 9999999999999999999986 2211111 0011 02677754 599865
Q ss_pred CceEEEEEeCCchhhh
Q 022564 263 PRGAMIFFRKGVKEIN 278 (295)
Q Consensus 263 p~gG~l~~~~~~~~~~ 278 (295)
.+.|++++++++.+..
T Consensus 302 ~~iG~v~~~~~~~~~~ 317 (451)
T 3oks_A 302 LPLSAVTGRAEIMDSP 317 (451)
T ss_dssp SSCEEEEEEHHHHTCS
T ss_pred cceEEEEECHHHHhhh
Confidence 3448899998876544
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.14 E-value=3.1e-10 Score=105.54 Aligned_cols=202 Identities=12% Similarity=0.140 Sum_probs=113.3
Q ss_pred CCHHHHHHHhhhhhcc-CCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc--
Q 022564 58 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL-- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~-- 133 (295)
.+|++.+++.+.+... +..+ . .++. ....++++++.+.++++++...+ .|++++|++ |+.+++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~--~--~~~~-~~~~~l~~~la~~l~~~~~~~~~----~v~f~~sGseA~~~Aik~a~~~ 150 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR--P--ALGI-LPPENFVEKLRESLLSVAPKGMS----QLITMACGSCSNENAFKTIFMW 150 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC--C--CTTT-SCBTTHHHHHHHTGGGGCCTTCC----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc--c--cccc-ccHHHHHHHHHHHHHHhCCCCcC----EEEEeCCchhHHHHHHHHHHHH
Confidence 4899999998876421 1111 0 1221 12235665566667666655554 677777777 8887776652
Q ss_pred -----C------------------CC---CeEEEecCCCCcccCcccccccc-ccccceee---eEEEeeecC--C--CC
Q 022564 134 -----K------------------PH---DRIMALDLPHGGHLSHGYQTDTK-KISAVSIF---FETMPYRLN--E--ST 179 (295)
Q Consensus 134 -----~------------------~g---d~Vl~~~~~~~~~~~~~~~~~~~-~~~~~g~~---~~~v~~~~~--~--~~ 179 (295)
+ || ++|++++..|.+.......+... .....+.. +..++++.. + ..
T Consensus 151 ~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 230 (472)
T 1ohv_A 151 YRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEF 230 (472)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGC
T ss_pred hhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccc
Confidence 1 46 89999998776653222111000 00000000 011222210 0 00
Q ss_pred --C-----CCCHHHHHHHHhhc-----CCcEEEEcC-CCC-CCccC----HHHHHHHHHHcCCEEEEEcccc-cccccc-
Q 022564 180 --G-----YIDYDQLEKSATLF-----RPKLIVAGA-SAY-ARLYD----YERIRKVCNKQKAIMLADMAHI-SGLVAA- 239 (295)
Q Consensus 180 --~-----~id~e~l~~~i~~~-----~tk~i~l~~-~n~-~~~~~----l~~I~~ia~~~~~~vivD~a~~-~g~~~~- 239 (295)
. ..|+++|++++++. ++++|++.+ +|+ |...+ +++|.++|++||+++|+|++|. +|....
T Consensus 231 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~ 310 (472)
T 1ohv_A 231 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKF 310 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCc
Confidence 0 23689999998752 678888863 333 55666 9999999999999999999997 332211
Q ss_pred -CCCCCCCC-cceEEEeCCCCC-CCCCceEEEEEeCCc
Q 022564 240 -GVIPSPFE-YADVVTTTTHKS-LRGPRGAMIFFRKGV 274 (295)
Q Consensus 240 -~~~~~~~~-~~D~~~~s~~K~-l~gp~gG~l~~~~~~ 274 (295)
.....++. ..|++++| |+ ++ ||+++ ++++
T Consensus 311 ~~~~~~gv~~~~Di~t~s--K~~l~---GG~~~-~~~~ 342 (472)
T 1ohv_A 311 WAHEHWGLDDPADVMTFS--KKMMT---GGFFH-KEEF 342 (472)
T ss_dssp SGGGGGCCSSCCSEEEEC--GGGSS---EEEEE-CGGG
T ss_pred hhccccCCCCCCCEEEEc--ccccc---CCccC-chhh
Confidence 11111111 16877655 98 44 57766 5554
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.67 E-value=1.2e-11 Score=114.72 Aligned_cols=204 Identities=13% Similarity=0.065 Sum_probs=120.6
Q ss_pred cCceecCCCCC-----CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCC-
Q 022564 47 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLS- 120 (295)
Q Consensus 47 ~~i~L~~~~~~-----~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~s- 120 (295)
+.|++..+... .+|.|.+++.+.+.+....++ ..+...++.+.++++++ ..+ .+++++
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-----------~~~~~~~Lae~L~~~~p-~~~----~v~~~nS 164 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-----------QTENEALFAEAVCDRFP-SID----LVRFTNS 164 (465)
Confidence 45777665542 378899999887765211111 12233345577888774 233 455555
Q ss_pred ChHHHHHHHHhh--cCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh--cCC
Q 022564 121 GSPSNFQVYTAL--LKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL--FRP 196 (295)
Q Consensus 121 G~~a~~~~~~al--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~--~~t 196 (295)
|+.|+.+++..+ ...+++|++++..|.+...... . +....|.....++++. .|++++++++++ .++
T Consensus 165 GseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~-s---g~~~~g~~~~~~~~~~------~d~~~l~~~l~~~~~~~ 234 (465)
T 2yky_A 165 GTEANLMALATATAITGRKTVLAFDGGYHGGLLNFA-S---GHAPTNAPYHVVLGVY------NDVEGTADLLKRHGHDC 234 (465)
Confidence 544888776654 3456899999877765432111 0 0001121001122221 378999998873 378
Q ss_pred cEEEEcC--CCCCCccC----HHHHHHHHHHcCCEEEEEccccccccccCCCCCCCC--cceEEEeCCCCCCCCC-ceEE
Q 022564 197 KLIVAGA--SAYARLYD----YERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSLRGP-RGAM 267 (295)
Q Consensus 197 k~i~l~~--~n~~~~~~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~--~~D~~~~s~~K~l~gp-~gG~ 267 (295)
++|++.+ +|.|...+ +++|.++|++||+++|+|++|+ +-. ......... ..|++ ++.|++++. +.|+
T Consensus 235 aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~ 310 (465)
T 2yky_A 235 AAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGGGAQEMLGISADLT--TLGKYIGGGMSFGA 310 (465)
Confidence 8888863 23354444 9999999999999999999998 421 111000001 25655 567999763 3489
Q ss_pred EEEeCCchhhhcc
Q 022564 268 IFFRKGVKEINKQ 280 (295)
Q Consensus 268 l~~~~~~~~~~~~ 280 (295)
+++++++.+....
T Consensus 311 v~~~~~i~~~l~~ 323 (465)
T 2yky_A 311 FGGRRDLMERFDP 323 (465)
Confidence 9999987665433
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.93 E-value=9.2e-09 Score=94.78 Aligned_cols=193 Identities=13% Similarity=0.056 Sum_probs=112.1
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al--~~ 134 (295)
-.|+|.+|+.+.+......+. .+.. +.++.+.+++.+.. .+ .++|+++.+ |+..++... ..
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~-------~~~~----~~~lae~l~~~~p~-~~----~v~f~~SGsEA~e~AiklAr~~t 167 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTG-------HNLL----EGRLARLICERFPQ-IE----QLRFTNSGTEANLMALTAALHFT 167 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCS-------EESS----HHHHHHHHHHHSTT-CS----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCccC-------CcHH----HHHHHHHHHHhCCC-CC----EEEEeCchHHHHHHHHHHHHhcc
Confidence 379999999998876321111 1112 22345777777753 22 566655444 888766554 23
Q ss_pred CCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhhc--CCcEEEEc--CCCCCCcc
Q 022564 135 PHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLF--RPKLIVAG--ASAYARLY 210 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~~--~tk~i~l~--~~n~~~~~ 210 (295)
..++|+...-.|.+....... .... .........++. -|++.+++.+++. ++.+|++- ..+.|...
T Consensus 168 gr~~ii~~~~~yHG~t~~~~~--~~~~--~~~~~~~~~~p~------nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 168 GRRKIVVFSGGYHGGVLGFGA--RPSP--TTVPFDFLVLPY------NDAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp TCCEEEEETTCBCSTTCBBSS--SBCT--TSCCSEEEEECT------TCHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred cCCeEEEEeCCcCCccccccc--cccC--ccCCCCcccCCC------chHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 457788887666654321111 0010 011112222222 2789999988742 46677774 34445444
Q ss_pred C----HHHHHHHHHHcCCEEEEEccccccccccCC--CCCCCCcceEEEeCCCCCCCCCc-eEEEEEeCCchhhhcc
Q 022564 211 D----YERIRKVCNKQKAIMLADMAHISGLVAAGV--IPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKGVKEINKQ 280 (295)
Q Consensus 211 ~----l~~I~~ia~~~~~~vivD~a~~~g~~~~~~--~~~~~~~~D~~~~s~~K~l~gp~-gG~l~~~~~~~~~~~~ 280 (295)
+ +++|.++|++||+++|+|++|. |-..... ...++ ..|++++ .|.++|.- .|.+.+++++.+....
T Consensus 238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv-~PDi~t~--gK~lggG~Piga~~~~~ei~~~~~~ 310 (454)
T 4ao9_A 238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGI-RSDLTTL--GKYIGGGMSFGAFGGRADVMALFDP 310 (454)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECHHHHGGGCT
T ss_pred CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCC-CCcEEEe--ccccCCCCcceeeeeHHHHHHHHhh
Confidence 4 9999999999999999999987 4221110 00110 2688765 47775543 3888899887765543
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.46 E-value=1.2e-05 Score=74.19 Aligned_cols=207 Identities=13% Similarity=0.063 Sum_probs=106.6
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEe-CCChHHHHHHHHhh--cC
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQS-LSGSPSNFQVYTAL--LK 134 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~-~sG~~a~~~~~~al--~~ 134 (295)
-.|++.+|+.+.+.. .... ..++..++ ...++.+.+.++...+..+ .++| .||+.|+..++... ..
T Consensus 81 ~~p~v~~Ai~~q~~~-~~~~---~~~~~~~~----~~~~lae~L~~~~p~~~~~---~v~f~~sGsEA~e~AlklAr~~t 149 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-FTHT---CFMVTPYE----GYVAVTEQLNRLTPGDHAK---RTVLFNSGAEAVENAVKVARLAT 149 (456)
T ss_dssp TCHHHHHHHHHHHHH-CSCC---TTTTSCCH----HHHHHHHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh-ccCc---ccCccCcH----HHHHHHHHHHHhCCCCCCc---EEEEeCChHHHHHHHHHHHhhhh
Confidence 379999999887765 2111 10111111 1222457777777543221 4555 45555887666543 34
Q ss_pred CCCeEEEecCCCCcccCcccc------ccccccccceeeeEEEeeec--CCCC-CCCCHHHHHHHHh-------hcCCcE
Q 022564 135 PHDRIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL--NEST-GYIDYDQLEKSAT-------LFRPKL 198 (295)
Q Consensus 135 ~gd~Vl~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~v~~~~--~~~~-~~id~e~l~~~i~-------~~~tk~ 198 (295)
...+|+.....|.+....... .++.........+..+|++. .... ...+.+.+++.++ ..++.+
T Consensus 150 ~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAA 229 (456)
T 4atq_A 150 GRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAA 229 (456)
T ss_dssp CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred cCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEE
Confidence 567888888777654311100 01100000011122233321 1111 1223444433332 235677
Q ss_pred EEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccc-ccccc--CCCCCCCCcceEEEeCCCCCCCCCce-EEE
Q 022564 199 IVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHIS-GLVAA--GVIPSPFEYADVVTTTTHKSLRGPRG-AMI 268 (295)
Q Consensus 199 i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~-g~~~~--~~~~~~~~~~D~~~~s~~K~l~gp~g-G~l 268 (295)
|++- ..+.| ...-+++|.++|++||+++|+|+.+.. |-... .....++ ..|+++++ |.++|.-- |.+
T Consensus 230 vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av 306 (456)
T 4atq_A 230 IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAI 306 (456)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceee
Confidence 8774 22223 333489999999999999999999863 21111 0111111 27998876 77755333 788
Q ss_pred EEeCCchhhh
Q 022564 269 FFRKGVKEIN 278 (295)
Q Consensus 269 ~~~~~~~~~~ 278 (295)
.+++++.+..
T Consensus 307 ~~~~~i~~~~ 316 (456)
T 4atq_A 307 TGRADLLDAV 316 (456)
T ss_dssp EEEHHHHTTS
T ss_pred EecHHHHhcc
Confidence 8888765543
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.61 E-value=0.0014 Score=60.63 Aligned_cols=204 Identities=12% Similarity=0.085 Sum_probs=104.3
Q ss_pred CCHHHHHHHhhhhhccCCCCCCCCcccCCcchHHHHHHHHHHHHHHHcCCCCCCcceeEEeCCChH-HHHHHHHhhc---
Q 022564 58 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSP-SNFQVYTALL--- 133 (295)
Q Consensus 58 ~~~~v~~al~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~v~~~sG~~-a~~~~~~al~--- 133 (295)
-.|++.+++.+.+.+....+ .+++. .. +...++.+.+.++...+-+ .|+|+++.+ |+..++....
T Consensus 84 ~~p~v~~Ai~~q~~~l~~~~----~~~~~-~~--~~~~~lAe~L~~~~p~~~~----~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPGYH----AFFGR-MS--DQTVMLSEKLVEVSPFDSG----RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCCCCC----CCTTE-EE--HHHHHHHHHHHHHSSCSSC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccc----ccccc-cC--HHHHHHHHHHHhhCCCCcc----EEEEeCchHHHHHHHHHHHHHHH
Confidence 47999999998876521101 11111 11 1222355778888765554 566665555 8876665431
Q ss_pred ----CC-CCeEEEecCCCCcccCcccc----cccc--ccccceeeeEEEeeec--C-CCCCCC-------CHHHHHHHHh
Q 022564 134 ----KP-HDRIMALDLPHGGHLSHGYQ----TDTK--KISAVSIFFETMPYRL--N-ESTGYI-------DYDQLEKSAT 192 (295)
Q Consensus 134 ----~~-gd~Vl~~~~~~~~~~~~~~~----~~~~--~~~~~g~~~~~v~~~~--~-~~~~~i-------d~e~l~~~i~ 192 (295)
.+ ..+|+.....|.+....... .+.. ..-+.+ ...++.+. . ...... ..+++++.+.
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 230 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETEEQFVARLARELEETIQ 230 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCc--ccccCCCcccccccccchhhHHHHHHHHHHHHHHH
Confidence 23 35688777666553211100 0000 011112 12222221 0 011111 1344555554
Q ss_pred h---cCCcEEEEc--CCCCC----CccCHHHHHHHHHHcCCEEEEEccccc-cccccC--CCCCCCCcceEEEeCCCCCC
Q 022564 193 L---FRPKLIVAG--ASAYA----RLYDYERIRKVCNKQKAIMLADMAHIS-GLVAAG--VIPSPFEYADVVTTTTHKSL 260 (295)
Q Consensus 193 ~---~~tk~i~l~--~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~-g~~~~~--~~~~~~~~~D~~~~s~~K~l 260 (295)
. .++.+|++- ..+.| ...-+++|.++|++||+++|.|+.+.. |-.... ....++ ..|++++ .|.+
T Consensus 231 ~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~--~K~l 307 (473)
T 4e3q_A 231 REGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIIS--SKNL 307 (473)
T ss_dssp HHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEE--CGGG
T ss_pred hhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHh--cccc
Confidence 2 245667763 22223 333489999999999999999999752 111100 000110 2788876 4877
Q ss_pred CCC--ceEEEEEeCCchhh
Q 022564 261 RGP--RGAMIFFRKGVKEI 277 (295)
Q Consensus 261 ~gp--~gG~l~~~~~~~~~ 277 (295)
+|. +-|.+++++++.+.
T Consensus 308 ~gG~~Pl~av~~~~~i~~~ 326 (473)
T 4e3q_A 308 TAGFFPMGAVILGPELSKR 326 (473)
T ss_dssp GTTSSCCEEEEECHHHHHH
T ss_pred cCCCCCcccccccHHHHHH
Confidence 543 44888888886553
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.60 E-value=0.00037 Score=68.85 Aligned_cols=92 Identities=12% Similarity=-0.008 Sum_probs=56.2
Q ss_pred HHHHHHHhh-------cCCcEEEEcC--CCCC-Ccc----CHHHHHHHHHHcCCEEEEEcccc-ccccccC--CCCCCCC
Q 022564 185 DQLEKSATL-------FRPKLIVAGA--SAYA-RLY----DYERIRKVCNKQKAIMLADMAHI-SGLVAAG--VIPSPFE 247 (295)
Q Consensus 185 e~l~~~i~~-------~~tk~i~l~~--~n~~-~~~----~l~~I~~ia~~~~~~vivD~a~~-~g~~~~~--~~~~~~~ 247 (295)
+++++.+++ .++.+|++-+ .+.+ ... -+++|.++|++||+++|+|++|. +|-.... ....++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 567777652 2456777643 3443 333 28999999999999999999875 2221110 000110
Q ss_pred cceEEEeCCCCCCCCC--ceEEEEEeCCchhhhc
Q 022564 248 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINK 279 (295)
Q Consensus 248 ~~D~~~~s~~K~l~gp--~gG~l~~~~~~~~~~~ 279 (295)
..|+++ ..|.++|. +-|++++++++.+...
T Consensus 656 ~PDiit--lsK~L~gG~~Plgav~~~~~i~~~~~ 687 (831)
T 4a0g_A 656 KPDIAC--FAKLLTGGMVPLAVTLATDAVFDSFS 687 (831)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEECHHHHHTTC
T ss_pred CCcEEE--EecccccCccCcEEEEECHHHHHHHh
Confidence 257764 67988763 3388888888765443
No 237
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=61.20 E-value=17 Score=31.76 Aligned_cols=92 Identities=12% Similarity=0.037 Sum_probs=59.5
Q ss_pred CCCCHHHHHHHHh---hcCCcEEEE-cCCCCC---CccCHHHHHHHHHHc-CCEEEEEccccccccccCCCCCCCCcceE
Q 022564 180 GYIDYDQLEKSAT---LFRPKLIVA-GASAYA---RLYDYERIRKVCNKQ-KAIMLADMAHISGLVAAGVIPSPFEYADV 251 (295)
Q Consensus 180 ~~id~e~l~~~i~---~~~tk~i~l-~~~n~~---~~~~l~~I~~ia~~~-~~~vivD~a~~~g~~~~~~~~~~~~~~D~ 251 (295)
+.-++++++.+++ .....++++ |.++|| ...+|..|..+.+.+ +++| .|..|+.|.... +.. -..|||+
T Consensus 156 Gmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~-~AA-vAlGA~i 232 (349)
T 2wqp_A 156 GMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC-LGA-VALGGSI 232 (349)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH-HHH-HHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH-HHH-HHhCCCE
Confidence 4448888877663 223366666 566665 566899999999998 8887 588998872211 000 0015887
Q ss_pred E--EeCCCCCCCCCceEEEEEeCCc
Q 022564 252 V--TTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 252 ~--~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
+ -+++.|.+.||.+..-+..+++
T Consensus 233 IEkH~tld~a~~G~D~~~SL~p~ef 257 (349)
T 2wqp_A 233 LERHFTDRMDRPGPDIVCSMNPDTF 257 (349)
T ss_dssp EEEEBCSCTTCCSTTGGGCBCHHHH
T ss_pred EEeCCCccccCCCCChhhhCCHHHH
Confidence 6 6788999988877444444443
No 238
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=60.93 E-value=37 Score=30.00 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHh---hc-CCcEEEE-cCCCCC---CccCHHHHHHHHHHc-CCEEEEEccccccc-cccC-CCCCCCCc
Q 022564 180 GYIDYDQLEKSAT---LF-RPKLIVA-GASAYA---RLYDYERIRKVCNKQ-KAIMLADMAHISGL-VAAG-VIPSPFEY 248 (295)
Q Consensus 180 ~~id~e~l~~~i~---~~-~tk~i~l-~~~n~~---~~~~l~~I~~ia~~~-~~~vivD~a~~~g~-~~~~-~~~~~~~~ 248 (295)
+.-++++++.+++ .. +..++++ |.++|| ...+|..|..+.+.+ ++.| .|..|+.|- ...- --.. |
T Consensus 166 GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~~AAvAl---G 241 (385)
T 1vli_A 166 AGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAPCAAVRL---G 241 (385)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHHHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHHHHHHHc---C
Confidence 4448888887764 21 2466666 566665 566888999999998 8887 688888872 2110 0011 4
Q ss_pred ceEE--EeCCCCCCCCCceEEEEEeCCc
Q 022564 249 ADVV--TTTTHKSLRGPRGAMIFFRKGV 274 (295)
Q Consensus 249 ~D~~--~~s~~K~l~gp~gG~l~~~~~~ 274 (295)
||++ -+++.|.+.||.+..-+..+++
T Consensus 242 A~iIEkHftldra~~G~D~~~SL~P~ef 269 (385)
T 1vli_A 242 AKLIEKHFTIDKNLPGADHSFALNPDEL 269 (385)
T ss_dssp CSEEEEEBCSCTTSSCSSCTTSBCHHHH
T ss_pred CCEEEeCCCccccCCCCchhhhCCHHHH
Confidence 8876 6888999988877444433333
No 239
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=59.50 E-value=22 Score=29.59 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=39.5
Q ss_pred CCHHHHHHHHhh----cCCcEEEE-----cCCCCC-CccCHHHHHHHHHHcCCEEEEEccccccc
Q 022564 182 IDYDQLEKSATL----FRPKLIVA-----GASAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (295)
Q Consensus 182 id~e~l~~~i~~----~~tk~i~l-----~~~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (295)
.+++++..++.- -+..++++ |.++++ ...++..+..+.+..++.||.|..|+.|.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 488888887741 13455554 234665 55678888888888799999999999775
No 240
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=57.38 E-value=25 Score=29.57 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=40.7
Q ss_pred CCC-CCHHHHHHHHhh----cCCcEEEE--cC---CCCC-CccCHHHHHHHHHHcCCEEEEEccccccc
Q 022564 179 TGY-IDYDQLEKSATL----FRPKLIVA--GA---SAYA-RLYDYERIRKVCNKQKAIMLADMAHISGL 236 (295)
Q Consensus 179 ~~~-id~e~l~~~i~~----~~tk~i~l--~~---~n~~-~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (295)
++. .++++++.+++. -+..++++ |. ++++ ...++..|..+.+..++.|+.|..|+.|.
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 344 488888877642 14566665 33 3433 56688888888777899999999999773
No 241
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=52.84 E-value=22 Score=31.47 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=40.5
Q ss_pred CCC-CCHHHHHHHHhh----cCCcEEEE-c-CCCCC----CccCHHHHHHHHHHcCCEEEEEcccccc
Q 022564 179 TGY-IDYDQLEKSATL----FRPKLIVA-G-ASAYA----RLYDYERIRKVCNKQKAIMLADMAHISG 235 (295)
Q Consensus 179 ~~~-id~e~l~~~i~~----~~tk~i~l-~-~~n~~----~~~~l~~I~~ia~~~~~~vivD~a~~~g 235 (295)
++. .++++++.+++. .+.+++++ | .++++ ...++..|..+.+..+++|++|.+|+.|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 344 688888777642 14566666 3 44443 3567888888888889999999999876
No 242
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=52.55 E-value=36 Score=24.66 Aligned_cols=50 Identities=8% Similarity=-0.057 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.++++..+++ ++.+|+++.-.......-.++.+..+++|+-+-+-.+
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 5888999999886 8999999744444433457888899999987665544
No 243
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.42 E-value=20 Score=27.28 Aligned_cols=51 Identities=12% Similarity=-0.063 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC---CEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK---AIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~---~~vivD~a 231 (295)
...++++.+++.+.++.+|.++..+.+....++++.+.+++.+ +.|++=++
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3578888888887799999998666666777888888888764 66776554
No 244
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=50.96 E-value=24 Score=30.75 Aligned_cols=58 Identities=17% Similarity=0.201 Sum_probs=40.5
Q ss_pred CCC-CCHHHHHHHHh----hcCCcEEEE-----cCCCC-CCccCHHHHHHHHHHcCCEEEEEccccccc
Q 022564 179 TGY-IDYDQLEKSAT----LFRPKLIVA-----GASAY-ARLYDYERIRKVCNKQKAIMLADMAHISGL 236 (295)
Q Consensus 179 ~~~-id~e~l~~~i~----~~~tk~i~l-----~~~n~-~~~~~l~~I~~ia~~~~~~vivD~a~~~g~ 236 (295)
++. .++++++.+++ .-+..++++ +++++ ....++..|..+.+..++.|+.|..|+.|.
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 344 48888877764 124566665 13444 356688888888888899999999999873
No 245
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=50.32 E-value=18 Score=24.19 Aligned_cols=44 Identities=14% Similarity=-0.053 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..+..++++..+.+++++...-.+ .-...|..+|++++++++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 456777787657788888522222 34668889999999976643
No 246
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=49.79 E-value=39 Score=24.36 Aligned_cols=46 Identities=7% Similarity=0.174 Sum_probs=29.8
Q ss_pred CCHHHHHHHHhh--------cCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 182 IDYDQLEKSATL--------FRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 182 id~e~l~~~i~~--------~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
.|++++.+.+.+ .+-.-|++..+......++.+|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 467777666643 1233555542222234689999999999999875
No 247
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=48.47 E-value=10 Score=34.20 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=25.1
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4457788999999999999999999998
No 248
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=48.15 E-value=35 Score=27.00 Aligned_cols=52 Identities=8% Similarity=0.099 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC----CEEEEEccc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK----AIMLADMAH 232 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~----~~vivD~a~ 232 (295)
.+..+++.+.+.+.++.+|.++....+....++++.+.+++.+ +.|++=++.
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~ 180 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAP 180 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTT
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCC
Confidence 4678999888877799999998655556667888888888764 788876653
No 249
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=48.11 E-value=58 Score=27.06 Aligned_cols=51 Identities=6% Similarity=0.179 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCC---CccCHHHHHHHHHHcC----CEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYA---RLYDYERIRKVCNKQK----AIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~---~~~~l~~I~~ia~~~~----~~vivD~a 231 (295)
.+.++++.+++.+.++.+|.++....+ ....+.++.+.+++.+ +.|++=++
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 568899988887779999999755554 5666778888888765 78887766
No 250
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=45.86 E-value=11 Score=25.43 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999976
No 251
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.53 E-value=37 Score=23.37 Aligned_cols=42 Identities=14% Similarity=0.009 Sum_probs=29.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
.++..++++..+.++|++.... + ..-.+.|..+|++++++++
T Consensus 20 ~~~v~kai~~gka~lViiA~D~-~-~~~~~~i~~~c~~~~ip~~ 61 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKNA-P-KEIKDDIYYYAKLSDIPVY 61 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECCC-C-HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCccEEEEeCCC-C-HHHHHHHHHHHHHcCCCEE
Confidence 4667778876678888885322 2 3336688889999999864
No 252
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=43.97 E-value=57 Score=23.42 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=32.9
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEE-EEEccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM-LADMAHISGL 236 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~v-ivD~a~~~g~ 236 (295)
..+..++++..+.++|++...-.+ ..-...|..+|+++++++ +++.-.-+|.
T Consensus 25 ~~~v~kai~~gkakLViiA~D~~~-~~~~~~l~~lc~~~~VP~~~v~sk~eLG~ 77 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIAGDIWP-ADVISHIPVLCEDHSVPYIFIPSKQDLGA 77 (121)
T ss_dssp HHHHHHHHHHSCCCEEEECTTCSC-TTHHHHHHHHHHHTCCCEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHhcCCcEEEECCHHHHHH
Confidence 456677777667889988522212 111667889999999986 4554444454
No 253
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=43.83 E-value=71 Score=25.80 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=35.7
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+++++++.. ....|++....-.....++++.+.++++|+.+++|..
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 46778777765 7888877644322236789999999999999999865
No 254
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=43.25 E-value=74 Score=25.65 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=35.7
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+++++++.. ....|++....-.....++++.+.++++|+.+++|..
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 45678777765 7888877644322235789999999999999999865
No 255
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=41.66 E-value=44 Score=23.06 Aligned_cols=50 Identities=16% Similarity=0.003 Sum_probs=32.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE--Ecccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA--DMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv--D~a~~~g 235 (295)
.++..++++..+.++|++.... + ..-...|..+|++++++++. +...-+|
T Consensus 21 ~~~v~kai~~gka~lViiA~D~-~-~~~~~~l~~~c~~~~vp~~~~~~s~~eLG 72 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVARNA-R-PDIKEDIEYYARLSGIPVYEFEGTSVELG 72 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEETTS-C-HHHHHHHHHHHHHHTCCEEEESSCHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEeCCC-C-HHHHHHHHHHHHhcCCCEEEecCCHHHHH
Confidence 4567777776578888885322 2 23366888899999998553 4443344
No 256
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=41.57 E-value=46 Score=23.18 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.++..++++..+.++|++.....+ .-.++|..+|++++++++.
T Consensus 27 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~ip~~~ 69 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISNNCPT--VRKSEIEYYASLAQISIHH 69 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECTTSCH--HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHcCCcEEE
Confidence 466777787657888888522212 2267888899999999873
No 257
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=40.77 E-value=34 Score=29.80 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCCCCCcceeE-EeCCC-------hH--HHHHHHHhh---cCCCCeEEEec
Q 022564 96 LCQKRALEAFRLDPEKWGVNV-QSLSG-------SP--SNFQVYTAL---LKPHDRIMALD 143 (295)
Q Consensus 96 ~~~~~la~~~g~~~~~~~~~v-~~~sG-------~~--a~~~~~~al---~~~gd~Vl~~~ 143 (295)
.+++.|.+.+|.+.+ +| +++.. .+ .+..++..+ +++||.+++.=
T Consensus 79 ~m~~~L~~~~Gf~~~----~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYF 135 (350)
T 4f6o_A 79 NIFNFLTNGYGYSSD----DIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHY 135 (350)
T ss_dssp HHHHHHHHHSCCCGG----GEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHhcCCCcc----ceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 366788777888764 33 33332 23 344456665 45899887544
No 258
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=40.48 E-value=16 Score=32.69 Aligned_cols=27 Identities=7% Similarity=0.266 Sum_probs=23.1
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+|+..+++++++-||++|+-||.|..
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 335677899999999999999999987
No 259
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=40.07 E-value=15 Score=32.95 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=24.8
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4456788999999999999999999987
No 260
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=39.95 E-value=17 Score=33.01 Aligned_cols=28 Identities=7% Similarity=0.154 Sum_probs=24.6
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3446788899999999999999999987
No 261
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=39.51 E-value=27 Score=25.69 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=35.3
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHc---CCEEEEEcc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQ---KAIMLADMA 231 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~---~~~vivD~a 231 (295)
..++++.+++.+.++.+|.++.........++++.+..++. ++.|++=++
T Consensus 41 ~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 41 SPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp ECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56888888887669999999865555455566777777665 466776554
No 262
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=39.39 E-value=17 Score=32.94 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=23.9
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 205 AYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 205 n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+|+..+++++++-||++|+-||.|..
T Consensus 78 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 78 KYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346778899999999999999999987
No 263
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=39.33 E-value=17 Score=32.88 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=24.3
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3346778899999999999999999987
No 264
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=39.15 E-value=1.4e+02 Score=23.47 Aligned_cols=91 Identities=8% Similarity=-0.016 Sum_probs=48.3
Q ss_pred eEEeCCChH-HHHHHHHhhcCCC-CeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHh
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPH-DRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAT 192 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~ 192 (295)
.|++|.|+. .-..+...|+..| -+|.+..-..... . ......+..+..+ .-|.++++++++
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-------~----~~~~~~~~~~~~D------l~d~~~~~~~~~ 87 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-------H----KPYPTNSQIIMGD------VLNHAALKQAMQ 87 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-------C----SSCCTTEEEEECC------TTCHHHHHHHHT
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-------c----ccccCCcEEEEec------CCCHHHHHHHhc
Confidence 455544444 3344778888888 5666654211000 0 0111113334322 237899999886
Q ss_pred hcCCcEEEEcCCCCCCccCHHHHHHHHHHcCC
Q 022564 193 LFRPKLIVAGASAYARLYDYERIRKVCNKQKA 224 (295)
Q Consensus 193 ~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~ 224 (295)
+..+|+.+..........+.+.+.+++.++
T Consensus 88 --~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~ 117 (236)
T 3qvo_A 88 --GQDIVYANLTGEDLDIQANSVIAAMKACDV 117 (236)
T ss_dssp --TCSEEEEECCSTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCEEEEcCCCCchhHHHHHHHHHHHHcCC
Confidence 467776553322222335678888888764
No 265
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=39.11 E-value=18 Score=32.07 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=24.1
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4446677899999999999999999987
No 266
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=39.08 E-value=15 Score=25.56 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-++|.++|+++|++++.|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 55899999999999999976
No 267
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=38.88 E-value=74 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=28.7
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 195 ~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.++++++.-..+....+.++.+.|+++|+.+++|..
T Consensus 186 ~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 222 (352)
T 4e84_A 186 QHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPK 222 (352)
T ss_dssp GCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECC
T ss_pred cCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 5788888632334445589999999999999999986
No 268
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=38.81 E-value=51 Score=26.90 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=39.9
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.| .+...+.+.+++..+. .+.+|.++.+..-+...+.++.+.+++++++++.
T Consensus 18 ~D-Pdk~~~~~~l~~~~~~-GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil 69 (235)
T 3w01_A 18 LD-PAKHISDDDLDAICMS-QTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVL 69 (235)
T ss_dssp EC-TTSCCCHHHHHHHHTS-SCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEE
T ss_pred EC-CCCcCCHHHHHHHHHc-CCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEE
Confidence 45 3456678888887655 8999999876655677788888888888888776
No 269
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=38.76 E-value=18 Score=33.22 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4457788999999999999999999987
No 270
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=38.67 E-value=42 Score=26.51 Aligned_cols=42 Identities=14% Similarity=0.129 Sum_probs=32.3
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
|.++|+++++. ....+++-..+ ...++++.+.+++++-.+++
T Consensus 18 ~~~~l~~al~s-~~~~ifll~g~---i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILEL-DLTYMVMLETH---VAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTS-SCCEEEECSEE---TTTHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcC-CCCEEEEecCc---HHHHHHHHHHHHHcCCeEEE
Confidence 56889999876 67778775433 46799999999999866555
No 271
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=38.62 E-value=77 Score=21.82 Aligned_cols=52 Identities=12% Similarity=-0.114 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCC-CC-C----CccCHHHHHHHHHHcCCE-EEEEcc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGAS-AY-A----RLYDYERIRKVCNKQKAI-MLADMA 231 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~-n~-~----~~~~l~~I~~ia~~~~~~-vivD~a 231 (295)
...+++.|++.+++.++..|+++.| |. | ...-..+.++..++.++. .++|+-
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DER 94 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4567899999998888999999733 22 3 333445555443333765 558875
No 272
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=38.26 E-value=17 Score=25.11 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|++|+.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 55899999999999999976
No 273
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=37.64 E-value=33 Score=29.87 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=22.0
Q ss_pred CccCHHHHHHHHHHcCCE--EEEEccccccc
Q 022564 208 RLYDYERIRKVCNKQKAI--MLADMAHISGL 236 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~--vivD~a~~~g~ 236 (295)
...++..+.++.++.++. |++|++|+.+.
T Consensus 242 ~~~di~~~~~~l~~~~lp~~VivD~SH~ns~ 272 (350)
T 1n8f_A 242 SAKHVAEVKEGLNKAGLPAQVMIDFSHANSS 272 (350)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEECSGGGTT
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEECCCcccC
Confidence 445666777666777999 99999998654
No 274
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=37.51 E-value=17 Score=25.41 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|++|+.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 55899999999999999975
No 275
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=37.50 E-value=54 Score=23.06 Aligned_cols=42 Identities=12% Similarity=-0.037 Sum_probs=28.8
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
.++..++++..+.++|++.... + ..-...|..+|++++++++
T Consensus 26 ~~~v~kai~~gka~lViiA~D~-~-~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNI-P-KDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTC-B-HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCceEEEEeCCC-C-HHHHHHHHHHHHHcCCCEE
Confidence 4567777776578888885222 2 2336688889999999854
No 276
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=37.38 E-value=20 Score=33.00 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.0
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5557788999999999999999999987
No 277
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=37.29 E-value=19 Score=33.02 Aligned_cols=25 Identities=8% Similarity=0.267 Sum_probs=22.4
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|.+
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4667899999999999999999987
No 278
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=37.17 E-value=67 Score=22.35 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=30.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.++..+.++..+.++|++..... ..-.++|..+|+++++.++.
T Consensus 27 ~~~v~kai~~gkaklVilA~D~~--~~~~~~i~~~c~~~~ip~~~ 69 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIAANTP--VLRKSELEYYAMLSKTKVYY 69 (105)
T ss_dssp HHHHHHHHHTTCCSEEEECTTSC--HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCceEEEEeCCCC--HHHHHHHHHHHHHcCCCEEE
Confidence 46677788765788888852221 22357888999999999983
No 279
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=36.78 E-value=21 Score=31.90 Aligned_cols=28 Identities=11% Similarity=0.212 Sum_probs=24.2
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..|+..+++++++-||++|+-||.|..
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3446778899999999999999999987
No 280
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=36.57 E-value=20 Score=32.40 Aligned_cols=29 Identities=10% Similarity=0.275 Sum_probs=25.5
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 203 ASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 203 ~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+.+|+..+++++++-||++|+-||.|..
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 35567788999999999999999999987
No 281
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=36.28 E-value=51 Score=22.73 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=29.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.++..++++..+.++|++.....+ .-.+.|..+|++++++++.
T Consensus 23 ~~~v~kai~~gka~lViiA~D~~~--~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 23 EEQVVKAVQNGQVTLVILSSDAGI--HTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETTSCH--HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCcEEEEeCCCCH--HHHHHHHHHHHHcCCCEEE
Confidence 466777887657888888422212 1366888899999997654
No 282
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=35.36 E-value=58 Score=23.44 Aligned_cols=37 Identities=11% Similarity=0.210 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 185 DQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 185 e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
+.++++.+. .+|.++++. |.. -+++.++|+++|+-++
T Consensus 73 ~~v~e~~~~-g~k~v~~~~---G~~--~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 73 SEYNYILSL-KPKRVIFNP---GTE--NEELEEILSENGIEPV 109 (122)
T ss_dssp GGHHHHHHH-CCSEEEECT---TCC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhc-CCCEEEECC---CCC--hHHHHHHHHHcCCeEE
Confidence 345555555 788888752 211 2699999999999888
No 283
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.20 E-value=45 Score=26.67 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHhhcCCcEEEE--cCCCCCCccCHHHHHHHHHHcC----CEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVA--GASAYARLYDYERIRKVCNKQK----AIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l--~~~n~~~~~~l~~I~~ia~~~~----~~vivD~a 231 (295)
.+.++++.+++.+.++.+|.+ +....+....++++.+.+++.+ +.|++=++
T Consensus 129 ~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 129 DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 467899988887779999999 6444456666888888888774 57777665
No 284
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=35.18 E-value=20 Score=32.58 Aligned_cols=28 Identities=14% Similarity=0.437 Sum_probs=23.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3345677899999999999999999987
No 285
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=34.98 E-value=95 Score=22.48 Aligned_cols=52 Identities=6% Similarity=0.075 Sum_probs=32.6
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE-EEccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISGL 236 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi-vD~a~~~g~ 236 (295)
..+..++++..+.+++++...-.+ ..-...|..+|++++++++ ++.-.-+|.
T Consensus 29 ~~~v~Kai~~gka~LViiA~D~~p-~~~~~~i~~lc~~~~Ip~~~v~sk~~LG~ 81 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVAEDCDQ-GNYVKLVKALCAKNEIKYVSVPKRASLGE 81 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEESSCCS-TTHHHHHHHHHHHTTCCEEEESCSHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCh-HHHHHHHHHHHHHhCCCEEEECCHHHHHH
Confidence 345666777657889888521111 1224678899999999765 555444443
No 286
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=33.89 E-value=54 Score=22.65 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.++..++++..+.++|++.....+ .-...|..+|++++++++.
T Consensus 24 ~~~v~kai~~gka~lViiA~D~~~--~~~~~i~~~c~~~~vp~~~ 66 (101)
T 3v7q_A 24 EDLVIKEIRNARAKLVLLTEDASS--NTAKKVTDKCNYYKVPYKK 66 (101)
T ss_dssp HHHHHHHHHTTCCSEEEEETTSCH--HHHHHHHHHHHHTTCCEEE
T ss_pred hhhhHHHHhcCceeEEEEeccccc--cchhhhcccccccCCCeee
Confidence 466778887667888888422211 1366788899999997654
No 287
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=33.19 E-value=21 Score=32.17 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.6
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+|+..+++++++-||++|+-||.|..
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 35677899999999999999999987
No 288
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=32.94 E-value=23 Score=32.09 Aligned_cols=29 Identities=7% Similarity=0.229 Sum_probs=25.3
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 203 ASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 203 ~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+.+|+..+++++++-||++|+-||.|..
T Consensus 91 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 91 NSNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp CTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 35567788999999999999999999987
No 289
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=32.33 E-value=24 Score=31.49 Aligned_cols=26 Identities=12% Similarity=0.363 Sum_probs=22.1
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+|+..+++++++-||++|+-||.|..
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 35677888999999999999999986
No 290
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=32.29 E-value=1e+02 Score=26.88 Aligned_cols=50 Identities=6% Similarity=-0.013 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+|+++|+++|+.++.=+
T Consensus 254 ~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 254 VWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp CSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 45788999888764577888877777888889999999999999987643
No 291
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=31.77 E-value=77 Score=27.56 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
...+++++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 245 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 245 CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee
Confidence 345889999998874678888877777888889999999999999777653
No 292
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=31.48 E-value=97 Score=22.73 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=29.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.+.++++++. .++.+++.... .-+++.++|+++|+.++-+.+
T Consensus 91 ~~vv~~~~~~-gi~~i~~~~g~-----~~~~l~~~a~~~Gi~vvGpnc 132 (144)
T 2d59_A 91 MEYVEQAIKK-GAKVVWFQYNT-----YNREASKKADEAGLIIVANRC 132 (144)
T ss_dssp HHHHHHHHHH-TCSEEEECTTC-----CCHHHHHHHHHTTCEEEESCC
T ss_pred HHHHHHHHHc-CCCEEEECCCc-----hHHHHHHHHHHcCCEEEcCCc
Confidence 3444555554 77888765221 257999999999999887777
No 293
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=31.48 E-value=19 Score=32.56 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=23.2
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+|+..+++++++-||++|+-||.|..
T Consensus 71 ~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 71 SGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp TEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 45677899999999999999999987
No 294
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=31.35 E-value=27 Score=32.78 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=22.0
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 196 Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 196 GSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 3556789999999999999999988
No 295
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=31.26 E-value=71 Score=26.89 Aligned_cols=53 Identities=13% Similarity=0.258 Sum_probs=34.7
Q ss_pred CCHHHHHHHHh----hcCCcEEEE-cCCCCCC---ccCHHHHHHHHHHc-CCEEEEEccccc
Q 022564 182 IDYDQLEKSAT----LFRPKLIVA-GASAYAR---LYDYERIRKVCNKQ-KAIMLADMAHIS 234 (295)
Q Consensus 182 id~e~l~~~i~----~~~tk~i~l-~~~n~~~---~~~l~~I~~ia~~~-~~~vivD~a~~~ 234 (295)
.++++++.+++ .-+.+++++ +.++++. ..|+..|..+.+.. +++|+.|..|+.
T Consensus 145 ~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~ 206 (285)
T 3sz8_A 145 MSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSL 206 (285)
T ss_dssp SCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTC
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCcc
Confidence 35555544432 224566666 3555552 35888988888777 799999999983
No 296
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=31.25 E-value=26 Score=24.64 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=35.3
Q ss_pred cEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 197 KLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 197 k~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
|++++|.+..++-.=++.+.+.++++|+-+-++++.. +.+.. .+..+|+++.+++
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~-~~~~~-----~~~~~Dvil~~pq 59 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPE-TLAGE-----KGQNADVVLLGPQ 59 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECS-SSTTH-----HHHHCSEEEECTT
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecH-HHHHh-----hccCCCEEEEccc
Confidence 5777787666644557799999999999776665521 11111 0113788887776
No 297
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=30.78 E-value=26 Score=31.36 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=22.0
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||+|..
T Consensus 81 Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 81 GTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3556789999999999999999987
No 298
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=30.56 E-value=70 Score=23.51 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=31.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEE-EEEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIM-LADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~v-ivD~a~~~g 235 (295)
..+..++++..+.++|++...-.+ ..-...|..+|+++|+++ +++.-.-+|
T Consensus 37 ~~~v~kai~~gkakLViiA~D~~p-~~~~~~l~~lc~~~~VP~~~v~sk~eLG 88 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMAADCEP-IEILLHLPLLCEDKNVPYVFVPSRVALG 88 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEETTCSS-GGGGTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred chHHHHHHHhCCCeEEEEeCCCCH-HHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 456677777657788888522212 122557779999999975 454443344
No 299
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=30.38 E-value=29 Score=32.19 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=21.9
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 77 Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 77 GTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566789999999999999999987
No 300
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=30.28 E-value=54 Score=28.61 Aligned_cols=51 Identities=6% Similarity=-0.160 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
..+|+....++++. ....+-+++.|.+...-++++.+.|+++|+.+-+-.-
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN 141 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVN 141 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecC
Confidence 56788878777765 5777888888888777789999999999999888644
No 301
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=30.09 E-value=84 Score=27.13 Aligned_cols=49 Identities=8% Similarity=0.140 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..+.+++++.++.....+|.+-....|.+.+..+++++|+++|+.+++=
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 290 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCG 290 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeC
Confidence 3578888888876456777777666688888999999999999985443
No 302
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=30.04 E-value=21 Score=32.37 Aligned_cols=26 Identities=4% Similarity=0.098 Sum_probs=22.3
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 206 YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 206 ~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+|+..+++++++-||++|+-||.|..
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34567899999999999999999986
No 303
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=29.62 E-value=73 Score=22.58 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=30.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.++..+.++..+.++|++.....+ .-.++|..+|+.+++.++.
T Consensus 31 ~~~t~kai~~gkakLVilA~D~~~--~~~~~i~~~c~~~~ipv~~ 73 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILANNCPP--LRKSEIETYAMLAKISVHH 73 (112)
T ss_dssp HHHHHHHHHTTCCSEEEECSCCCH--HHHHHHHHHHHHTTCCEEC
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHcCCcEEE
Confidence 456677777657899988522222 2367888999999998774
No 304
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=29.46 E-value=30 Score=33.01 Aligned_cols=28 Identities=18% Similarity=0.409 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4556788999999999999999999987
No 305
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=29.44 E-value=30 Score=33.05 Aligned_cols=28 Identities=4% Similarity=0.237 Sum_probs=24.6
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4456778899999999999999999987
No 306
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=29.22 E-value=1.4e+02 Score=21.92 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHHhhcCCcEEEEcCC-C-CCCccC----HHHHH-HHHHHcCC-EEEEEcccc
Q 022564 179 TGYIDYDQLEKSATLFRPKLIVAGAS-A-YARLYD----YERIR-KVCNKQKA-IMLADMAHI 233 (295)
Q Consensus 179 ~~~id~e~l~~~i~~~~tk~i~l~~~-n-~~~~~~----l~~I~-~ia~~~~~-~vivD~a~~ 233 (295)
++..+++.|++.+++.++..|+++.| | +|+..+ .++.+ .+.++.++ +.++|+-.+
T Consensus 37 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 37 DGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp TTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred CcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 35668999999999888999999733 2 243333 22333 23344576 567999743
No 307
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=28.92 E-value=60 Score=27.23 Aligned_cols=51 Identities=16% Similarity=0.153 Sum_probs=34.4
Q ss_pred CHHHHHHHHh----hcCCcEEEE-cCCCCCC---ccCHHHHHHHHHHc-CCEEEEEcccc
Q 022564 183 DYDQLEKSAT----LFRPKLIVA-GASAYAR---LYDYERIRKVCNKQ-KAIMLADMAHI 233 (295)
Q Consensus 183 d~e~l~~~i~----~~~tk~i~l-~~~n~~~---~~~l~~I~~ia~~~-~~~vivD~a~~ 233 (295)
+++++..++. .-+..++++ +.++++. ..++..|..+.+.. ++.|++|..|+
T Consensus 141 t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 200 (280)
T 2qkf_A 141 SPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHS 200 (280)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCC
Confidence 5566665543 224566665 4444442 25888888887777 89999999998
No 308
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=28.77 E-value=31 Score=32.92 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4556788999999999999999999987
No 309
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=28.71 E-value=28 Score=32.40 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=21.7
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 90 Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 90 GTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3566788999999999999999987
No 310
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=28.56 E-value=1.3e+02 Score=26.51 Aligned_cols=57 Identities=2% Similarity=-0.070 Sum_probs=43.3
Q ss_pred EeeecCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 171 MPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 171 v~~~~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
+|+-.+ + ...+.+++++.++.....++.+-.+..|.+.+..+++++|+++|+.+++=
T Consensus 302 ipIa~d-E-~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 302 AELVAD-E-WCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCG 358 (413)
T ss_dssp EEEEEC-T-TCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEEC
T ss_pred CcEEeC-C-CcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 444355 2 35688999999876456777776666678888999999999999988873
No 311
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=28.33 E-value=57 Score=26.45 Aligned_cols=53 Identities=13% Similarity=0.079 Sum_probs=37.5
Q ss_pred cCCCCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 175 LNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 175 ~~~~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
.|| +.....+.+++..+. .|.+|+++.+..-+...+.++.+.+++++++++.=
T Consensus 13 iDP-dk~~~~~~~~~~~~~-GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlf 65 (228)
T 3vzx_A 13 LDP-NKDLPDEQLEILCES-GTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLE 65 (228)
T ss_dssp ECT-TSCCCTTHHHHHHTS-SCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEE
T ss_pred ECC-CCCCCHHHHHHHHHc-CCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEe
Confidence 453 233445677776654 79999998766555677888888888889888873
No 312
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=34.40 E-value=12 Score=25.48 Aligned_cols=20 Identities=5% Similarity=0.112 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|++++.|-.
T Consensus 29 A~~I~e~A~e~~VPi~e~~~ 48 (87)
T 3b1s_B 29 AQKIVEIAENYSIPVVRKPE 48 (87)
Confidence 45889999999999999976
No 313
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=28.29 E-value=95 Score=26.91 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
..+.+++++.++.....++.+-....|.+.+..+|+++|+++|+.+++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~ 295 (375)
T 1r0m_A 248 VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWC 295 (375)
T ss_dssp CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEe
Confidence 357888888887645777877776678888899999999999998544
No 314
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=28.23 E-value=29 Score=32.18 Aligned_cols=25 Identities=8% Similarity=0.336 Sum_probs=21.9
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 76 Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 76 GTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3566789999999999999999987
No 315
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=28.14 E-value=60 Score=27.39 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=34.2
Q ss_pred CHHHHHHHHh----hcCCcEEEE-cCCCCCC---ccCHHHHHHHHHHc-CCEEEEEcccc
Q 022564 183 DYDQLEKSAT----LFRPKLIVA-GASAYAR---LYDYERIRKVCNKQ-KAIMLADMAHI 233 (295)
Q Consensus 183 d~e~l~~~i~----~~~tk~i~l-~~~n~~~---~~~l~~I~~ia~~~-~~~vivD~a~~ 233 (295)
++++++.+++ .-+..++++ +.++++. ..++..|..+.+.. ++.|++|..|+
T Consensus 144 t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~ 203 (292)
T 1o60_A 144 SPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHS 203 (292)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCc
Confidence 5566655543 224566665 4444442 36888998877777 89999999998
No 316
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=28.09 E-value=32 Score=32.77 Aligned_cols=28 Identities=11% Similarity=0.351 Sum_probs=24.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+.+|+..+++++++-||++|+-||.|..
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4556788999999999999999999987
No 317
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=28.06 E-value=32 Score=32.31 Aligned_cols=25 Identities=8% Similarity=0.008 Sum_probs=22.1
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 206 Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 206 GTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566789999999999999999987
No 318
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=27.83 E-value=34 Score=32.03 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.9
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 85 Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 85 GTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3566789999999999999999987
No 319
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=27.81 E-value=34 Score=31.98 Aligned_cols=24 Identities=8% Similarity=0.185 Sum_probs=21.7
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+++++++-||++|+-||.|..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEC
Confidence 566799999999999999999987
No 320
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=27.74 E-value=1.2e+02 Score=27.07 Aligned_cols=50 Identities=8% Similarity=-0.073 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
...+.+++++.++..-..+|.+.....|.+.+..+++++|+++|+.+++-
T Consensus 319 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~ 368 (431)
T 2fym_A 319 FVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVIS 368 (431)
T ss_dssp TTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 44578888888876346677776666688888999999999999988764
No 321
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=27.70 E-value=25 Score=31.22 Aligned_cols=28 Identities=4% Similarity=0.101 Sum_probs=22.4
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 204 SAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 204 ~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..|+..+++++++-||++|+-||.|..
T Consensus 69 ~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 69 RYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4446677888888888888888888876
No 322
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=27.62 E-value=99 Score=26.79 Aligned_cols=50 Identities=8% Similarity=-0.064 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....++.+.....|.+.+..+|+++|+++|+.++.-+
T Consensus 244 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 244 CCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45789999988764577887777777888889999999999999887744
No 323
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=27.52 E-value=86 Score=22.39 Aligned_cols=51 Identities=10% Similarity=0.101 Sum_probs=30.3
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE-EEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (295)
..+..++++..+.+++++...-.+. .-...|..+|++++++++ ++...-+|
T Consensus 34 ~~~v~kai~~gka~lViiA~D~~p~-~~~~~l~~lc~~~~VP~~~v~sk~eLG 85 (120)
T 1xbi_A 34 ANEVTKAVERGIAKLVIIAEDVKPE-EVVAHLPYLCEEKGIPYAYVASKQDLG 85 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCSSG-GGTTTHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEcCCCChH-HHHHHHHHHHHhcCCCEEEeCCHHHHH
Confidence 4566777776578888885221111 114566788999998654 44433344
No 324
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=27.49 E-value=30 Score=32.74 Aligned_cols=49 Identities=6% Similarity=-0.038 Sum_probs=35.2
Q ss_pred CHHHHHHHH---hhcCCcEEEEcC-----CCC--------------CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSA---TLFRPKLIVAGA-----SAY--------------ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i---~~~~tk~i~l~~-----~n~--------------~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+.-|.+.| ++....+|.|++ ++. |+..+++++++-||++|+-||.|..
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 566666554 334677888741 111 3566799999999999999999987
No 325
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=27.45 E-value=84 Score=23.14 Aligned_cols=46 Identities=11% Similarity=0.074 Sum_probs=33.5
Q ss_pred HHHHHHhhcCCcEEEEcCC--CC-CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 186 QLEKSATLFRPKLIVAGAS--AY-ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 186 ~l~~~i~~~~tk~i~l~~~--n~-~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++.+.|.+.+..+|+.... +. +...|...|.+.|-+|+++++..-+
T Consensus 65 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 113 (134)
T 2xw6_A 65 QMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPM 113 (134)
T ss_dssp HHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHH
T ss_pred hHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHH
Confidence 5677777656777766533 32 2367899999999999999987655
No 326
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=27.36 E-value=30 Score=32.00 Aligned_cols=25 Identities=8% Similarity=0.324 Sum_probs=22.1
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 76 Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 76 GTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3566789999999999999999987
No 327
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=27.19 E-value=96 Score=27.87 Aligned_cols=46 Identities=7% Similarity=0.010 Sum_probs=35.3
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+++.+++.++..-..+|.+-....|.+.+.-+++++|+++|+.+++
T Consensus 333 n~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 333 NPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp CHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 5777777776634566666666667888888999999999998776
No 328
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=26.86 E-value=1.3e+02 Score=23.27 Aligned_cols=47 Identities=4% Similarity=-0.086 Sum_probs=34.9
Q ss_pred HHHHHHhhcCCcEEEEcCC--CCCC-ccCHHHHHHHHHHcCCEEEEEccc
Q 022564 186 QLEKSATLFRPKLIVAGAS--AYAR-LYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 186 ~l~~~i~~~~tk~i~l~~~--n~~~-~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
++.++|.+.+..+|+.... +... ..|...|.+.|-.|+++++.--+-
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnlat 138 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRST 138 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHHH
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 5677777657888877533 3223 678999999999999999976553
No 329
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=26.78 E-value=1.1e+02 Score=21.72 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE-EEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (295)
..+..++++..+.+++++...-.+. .-...|..+|++++++++ ++...-.|
T Consensus 32 ~~~v~kal~~gka~lViiA~D~~~~-~~~~~l~~lc~~~~Vp~~~~~sk~eLG 83 (119)
T 1rlg_A 32 TNETTKAVERGLAKLVYIAEDVDPP-EIVAHLPLLCEEKNVPYIYVKSKNDLG 83 (119)
T ss_dssp HHHHHHHHTTTCCSEEEEESCCSCS-TTTTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEeCCCChH-HHHHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 4566777776578888884211111 114677789999998754 44333344
No 330
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=26.75 E-value=73 Score=27.63 Aligned_cols=50 Identities=4% Similarity=0.044 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+++++|+++|+.++.=+
T Consensus 251 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 251 LHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp CCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred CCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 45789999988764567776666666788889999999999999877743
No 331
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=26.48 E-value=1.1e+02 Score=21.49 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=35.3
Q ss_pred CcEEEEcCCCCCC-ccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 196 PKLIVAGASAYAR-LYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 196 tk~i~l~~~n~~~-~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
.+++++|.+..++ ..=..+|.+.+++.|+-+-++... ...+... +..+|+++.+..
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~-~~~~~~~-----~~~~DlIist~~ 78 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCR-VNEIETY-----MDGVHLICTTAR 78 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEEC-TTTTTTS-----TTSCSEEEESSC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEec-HHHHhhc-----cCCCCEEEECCc
Confidence 3678889888873 334678889999999876555542 1112111 124898877665
No 332
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=26.36 E-value=30 Score=31.92 Aligned_cols=24 Identities=8% Similarity=0.241 Sum_probs=21.1
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+++++++-||++|+-||.|..
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 77 NMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 556788999999999999999987
No 333
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=26.24 E-value=35 Score=31.86 Aligned_cols=24 Identities=13% Similarity=0.283 Sum_probs=21.6
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+++++++-||++|+-||.|..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc
Confidence 566799999999999999999987
No 334
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=26.17 E-value=33 Score=25.01 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|++++.|-.
T Consensus 73 A~~I~~~A~e~~VPi~e~~~ 92 (123)
T 2jli_A 73 VQTVRKIAEEEGVPILQRIP 92 (123)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 45899999999999999976
No 335
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=26.00 E-value=92 Score=28.02 Aligned_cols=52 Identities=12% Similarity=0.148 Sum_probs=36.5
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccC-----HHHHHHHHHHcCCEEEEEccccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYD-----YERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~-----l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
++.++++++. .++.+++-..+.+...+ -+++.++|+++|+.++=+.+ .|.+.
T Consensus 78 ~~~v~e~~~~-Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc--~Gv~~ 134 (457)
T 2csu_A 78 KDTLIQCGEK-GVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNC--VGIMN 134 (457)
T ss_dssp HHHHHHHHHH-TCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSC--CEEEE
T ss_pred HHHHHHHHHc-CCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCc--ceEEc
Confidence 5666777766 88988775555543222 56899999999999997777 34443
No 336
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=25.95 E-value=1.7e+02 Score=24.67 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=36.2
Q ss_pred ecCCCCCCCCHHHHHHHHh---hcCCcEEEEc-CCCCC---CccCHHHHHHHHHHc---CCEEEEEc
Q 022564 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASAYA---RLYDYERIRKVCNKQ---KAIMLADM 230 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~~~tk~i~l~-~~n~~---~~~~l~~I~~ia~~~---~~~vivD~ 230 (295)
+.+ +++.+|.+.+++.++ +..+..|+++ .+.-. +..+-.++.+.+.+. .+.|++=.
T Consensus 26 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv 91 (304)
T 3l21_A 26 PFS-GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA 91 (304)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 455 578999999999875 2367888886 33333 444555666666553 57787743
No 337
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=25.90 E-value=1.2e+02 Score=26.85 Aligned_cols=51 Identities=8% Similarity=0.002 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
...+.+++++.++.....+|.+-.+..|.+.+..+++++|+++|+.+++=+
T Consensus 309 ~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 309 WCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 456789999988763467777766666888889999999999999887743
No 338
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=25.18 E-value=1.1e+02 Score=22.27 Aligned_cols=44 Identities=14% Similarity=0.017 Sum_probs=29.1
Q ss_pred HHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 187 l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
++++++. .++.+++..+. .-+++.++|+++|+.++-+.+ .|.+.
T Consensus 86 ~~~~~~~-g~~~i~~~~~~-----~~~~l~~~a~~~Gi~~igpnc--~g~~~ 129 (138)
T 1y81_A 86 AKEAVEA-GFKKLWFQPGA-----ESEEIRRFLEKAGVEYSFGRC--IMVET 129 (138)
T ss_dssp HHHHHHT-TCCEEEECTTS-----CCHHHHHHHHHHTCEEECSCC--HHHHC
T ss_pred HHHHHHc-CCCEEEEcCcc-----HHHHHHHHHHHCCCEEEcCCc--ceEEc
Confidence 3444443 67777775432 158999999999999876666 44443
No 339
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=25.14 E-value=70 Score=27.72 Aligned_cols=50 Identities=14% Similarity=-0.055 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+++++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 248 ATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp CCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 45788999988764567777765556778888999999999999887643
No 340
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=25.07 E-value=1.3e+02 Score=26.02 Aligned_cols=50 Identities=6% Similarity=-0.078 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....++.+.....|.+.+..+|+++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1chr_A 248 LSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGT 297 (370)
T ss_dssp CCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 45788888888753567777777777888889999999999999887643
No 341
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=25.05 E-value=1.1e+02 Score=22.52 Aligned_cols=47 Identities=6% Similarity=0.103 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.+-++++++. .++.+++..+ .. -+++.++|+++|+.++-+.+ .|...
T Consensus 84 ~~v~~~~~~~-g~~~i~i~~~---~~--~~~l~~~a~~~Gi~~igpnc--~g~~~ 130 (145)
T 2duw_A 84 WGVAQEAIAI-GAKTLWLQLG---VI--NEQAAVLAREAGLSVVMDRC--PAIEL 130 (145)
T ss_dssp HHHHHHHHHH-TCCEEECCTT---CC--CHHHHHHHHTTTCEEECSCC--HHHHS
T ss_pred HHHHHHHHHc-CCCEEEEcCC---hH--HHHHHHHHHHcCCEEEcCCe--eeEEc
Confidence 3444455554 7788776532 11 67999999999999998877 45443
No 342
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=25.04 E-value=1.9e+02 Score=24.29 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=35.8
Q ss_pred ecCCCCCCCCHHHHHHHHh---hcCCcEEEEcCC-CCC---CccCHHHHHHHHHHc---CCEEEEEcc
Q 022564 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGAS-AYA---RLYDYERIRKVCNKQ---KAIMLADMA 231 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~~~tk~i~l~~~-n~~---~~~~l~~I~~ia~~~---~~~vivD~a 231 (295)
+.+ +++.+|.+.+++.++ +..+..|+++.+ .-. +..+-.++.+.+.+. .+.||+=..
T Consensus 27 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 93 (304)
T 3cpr_A 27 PFT-ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG 93 (304)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC
Confidence 444 568999999998875 236788888633 222 344455666666553 477775443
No 343
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=25.00 E-value=35 Score=25.37 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-..|.++|+++|++|+.|-.
T Consensus 83 A~~I~e~A~e~gVPi~e~~~ 102 (137)
T 3bzs_A 83 ALQIIKLAELYDIPVIEDIP 102 (137)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 45899999999999999976
No 344
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=24.97 E-value=35 Score=32.63 Aligned_cols=49 Identities=18% Similarity=0.254 Sum_probs=35.2
Q ss_pred CHHHHHHHHh---hcCCcEEEEcC-----CC--------------CCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSAT---LFRPKLIVAGA-----SA--------------YARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i~---~~~tk~i~l~~-----~n--------------~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..|.+.|. +....+|+|++ ++ +|+..+++++++-||++|+-||.|..
T Consensus 263 dl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 263 DLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 5666655543 33677888741 11 13566789999999999999999987
No 345
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=24.75 E-value=93 Score=22.80 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=27.4
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML 227 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi 227 (295)
..+..++++..+.++|++.....+ ..-+..|..+|++++++++
T Consensus 46 ~~~v~kal~~gkaklViiA~D~~~-~~~~~~l~~lc~~~~IP~~ 88 (135)
T 2aif_A 46 ANEATKALNRGIAEIVLLAADAEP-LEILLHLPLVCEDKNTPYV 88 (135)
T ss_dssp HHHHHHHHHTTCEEEEEEETTCSC-HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCeEEEEecCCCh-HHHHhHHHHHHHhcCCcEE
Confidence 456677777646777777421111 1113788899999998765
No 346
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.58 E-value=1.1e+02 Score=23.08 Aligned_cols=47 Identities=6% Similarity=-0.048 Sum_probs=34.4
Q ss_pred HHHHHHhhcCCcEEEEcCC--CCC-CccCHHHHHHHHHHcCCEEEEEccc
Q 022564 186 QLEKSATLFRPKLIVAGAS--AYA-RLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 186 ~l~~~i~~~~tk~i~l~~~--n~~-~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
++.+.+.+.+..+|+.... +.. ...|...|.+.|-+|+++++.--+-
T Consensus 73 ~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~lat 122 (152)
T 1b93_A 73 QVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVAT 122 (152)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHHH
T ss_pred hHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 5677777657888877533 322 2668889999999999999976553
No 347
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=24.49 E-value=42 Score=31.69 Aligned_cols=25 Identities=8% Similarity=0.118 Sum_probs=22.1
Q ss_pred CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 207 ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 207 ~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+++++++-||++|+-||.|..
T Consensus 160 Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 160 GTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4667799999999999999999987
No 348
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=24.44 E-value=2.5e+02 Score=22.52 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=26.0
Q ss_pred CHHHHHHHHhhcCCcEEEEcCC-CCC---CccCHHHHHHHHHHcCC
Q 022564 183 DYDQLEKSATLFRPKLIVAGAS-AYA---RLYDYERIRKVCNKQKA 224 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~-n~~---~~~~l~~I~~ia~~~~~ 224 (295)
|.+.++++++ +...|+.+.. ..+ .......+.+.|++.++
T Consensus 55 d~~~l~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 55 NQESMVEAFK--GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CHHHHHHHTT--TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHh--CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 7888888886 4677776522 222 22345678888888875
No 349
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.43 E-value=75 Score=23.11 Aligned_cols=39 Identities=5% Similarity=0.032 Sum_probs=25.8
Q ss_pred HHHHHHHh-hcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 185 DQLEKSAT-LFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 185 e~l~~~i~-~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+.+..++. . ++.+|+++... .+-+++.++|+++|++|+.
T Consensus 64 ~~~l~a~~~~-~~~~iIlt~g~----~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 64 DLLLTALEMP-NVRCLILTGNL----EPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp HHHHHHTTCT-TEEEEEEETTC----CCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhCC-CCcEEEEcCCC----CCCHHHHHHHHHCCCeEEE
Confidence 33445554 4 67788886332 2456777899999998775
No 350
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=24.42 E-value=1e+02 Score=26.86 Aligned_cols=43 Identities=9% Similarity=0.025 Sum_probs=36.2
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
+.+++++.++.....+|.+. |.+.+..+|+++|+++|+.+++=
T Consensus 254 ~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 254 DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeec
Confidence 89999999976456777776 87888899999999999977766
No 351
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.30 E-value=47 Score=28.32 Aligned_cols=51 Identities=10% Similarity=0.048 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEE--cCCCCC------CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVA--GASAYA------RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l--~~~n~~------~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.++++.+.++.....|=+ .....+ ....++++.++|+++|++||+|--
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 355666766544324444433 211112 234578999999999999999964
No 352
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=24.24 E-value=1.1e+02 Score=25.47 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=34.9
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.+.++++++. +.+.+++..+..+ ..+.++|.++|+++++.++-.++ .|.+.
T Consensus 78 ~~~~~ea~~~-Gi~~vVi~t~G~~-~~~~~~l~~~a~~~gi~vigPNc--~Gii~ 128 (288)
T 1oi7_A 78 ADAALEAAHA-GIPLIVLITEGIP-TLDMVRAVEEIKALGSRLIGGNC--PGIIS 128 (288)
T ss_dssp HHHHHHHHHT-TCSEEEECCSCCC-HHHHHHHHHHHHHHTCEEEESSS--CEEEE
T ss_pred HHHHHHHHHC-CCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEEeCCC--CeEEc
Confidence 5666666665 7886665433333 34477999999999998887776 55554
No 353
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=24.20 E-value=1.4e+02 Score=26.14 Aligned_cols=49 Identities=8% Similarity=0.114 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..+.+++++.++.....++.+-....|.+.+..+|+++|+++|+.+++=
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~ 309 (393)
T 1wuf_A 261 IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEec
Confidence 3578888888876346777776666678888999999999999988764
No 354
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.17 E-value=83 Score=26.74 Aligned_cols=48 Identities=13% Similarity=0.088 Sum_probs=30.3
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~ 232 (295)
..+...++++. -|-|++--|--....+.++|.++|+++|+.+.+.-..
T Consensus 99 H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~ 146 (350)
T 4had_A 99 HIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMI 146 (350)
T ss_dssp HHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGG
T ss_pred hHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeee
Confidence 34444555542 2444443333335667889999999999988887653
No 355
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=24.10 E-value=1.1e+02 Score=21.98 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=29.8
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE-EEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (295)
..+..++++..+.++|++...-.+. .-...|..+|++++++++ ++...-+|
T Consensus 33 ~~~v~kal~~gka~lViiA~D~~~~-~~~~~l~~lc~~~~Vp~~~v~sk~eLG 84 (124)
T 2fc3_A 33 TNETTKAVERGLAKLVVIAEDVDPP-EIVMHLPLLCDEKKIPYVYVPSKKRLG 84 (124)
T ss_dssp HHHHHHHHHTTCCSEEEEETTCSSG-GGTTTHHHHHHHTTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEcCCCChH-HHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 4566777776578888885211110 113566678999998654 44433343
No 356
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=23.91 E-value=38 Score=31.56 Aligned_cols=49 Identities=8% Similarity=0.144 Sum_probs=34.3
Q ss_pred CHHHHHHHH---hhcCCcEEEEcC-----CCC--------------CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 183 DYDQLEKSA---TLFRPKLIVAGA-----SAY--------------ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 183 d~e~l~~~i---~~~~tk~i~l~~-----~n~--------------~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
|+..+.+.| ++.....|.+++ ++. |+..+++++++-||++|+-||.|..
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V 240 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAV 240 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 666665544 233677887741 111 2456788999999999999999987
No 357
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=23.73 E-value=1.1e+02 Score=21.95 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=30.8
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccC-HHHHHHHHHHcCCEEE-EEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYD-YERIRKVCNKQKAIML-ADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~-l~~I~~ia~~~~~~vi-vD~a~~~g 235 (295)
..+..++++..+.++|++.....+ .. ...|..+|++++++++ ++...-+|
T Consensus 36 ~~~v~kai~~gka~lViiA~D~~p--~~~~~~l~~lc~~~~VP~~~v~sk~eLG 87 (122)
T 3o85_A 36 ANEALKQVNRGKAELVIIAADADP--IEIVLHLPLACEDKGVPYVFIGSKNALG 87 (122)
T ss_dssp HHHHHHHHHTTCCSEEEEETTCSS--GGGGTTHHHHHHTTTCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCh--HHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 466777887667888888522211 11 3566778999999654 44433344
No 358
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=23.69 E-value=1.7e+02 Score=23.28 Aligned_cols=34 Identities=6% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCcEEEEcC--CCC-CCccCHHHHHHHHHHcCCEEEE
Q 022564 195 RPKLIVAGA--SAY-ARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 195 ~tk~i~l~~--~n~-~~~~~l~~I~~ia~~~~~~viv 228 (295)
.+..++.-- -|. |......++.++|++||+.++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 566666533 333 6888999999999999998874
No 359
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=23.64 E-value=39 Score=32.01 Aligned_cols=24 Identities=13% Similarity=0.045 Sum_probs=21.3
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+++++++-||++|+-||.|..
T Consensus 154 t~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 154 SNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 456788999999999999999987
No 360
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=23.56 E-value=45 Score=23.50 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=35.9
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 195 ~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
+.|++++|....++-.=.+++.+.|+++|+-+-+.+. +.+.+. ..+...|++..+++
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~-~~~~~~-----~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG-AYGAHY-----DIMGVYDLIILAPQ 62 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE-ETTSCT-----TTGGGCSEEEECGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc-chHHHH-----hhccCCCEEEEChH
Confidence 4577778865555444578999999999986655542 122211 11123789888776
No 361
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=23.56 E-value=38 Score=25.38 Aligned_cols=20 Identities=15% Similarity=0.401 Sum_probs=18.0
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-..|.++|+++|++|+.|-.
T Consensus 82 A~~I~e~A~e~gVPi~e~~~ 101 (144)
T 2jlj_A 82 VQTVRKIAEEEGVPILQRIP 101 (144)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 55899999999999999976
No 362
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=23.50 E-value=1.8e+02 Score=23.98 Aligned_cols=51 Identities=12% Similarity=0.179 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHhh----cCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATL----FRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~----~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+++...... .+.++++++.... ....-+.++.+.|+++|+.+++|-.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 163 (306)
T 2abq_A 107 LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTS 163 (306)
T ss_dssp CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 4677776654321 2567887753222 1234467888999999999999975
No 363
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=23.21 E-value=83 Score=27.34 Aligned_cols=50 Identities=8% Similarity=-0.097 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 246 LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred cCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 44788888888764567777765555778888999999999999887764
No 364
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=23.15 E-value=88 Score=22.90 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=27.3
Q ss_pred HHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 187 LEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 187 l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
++++++. .++.+++..+.. -+++.++|+++|+-++-+.+
T Consensus 87 ~~~~~~~-gi~~i~~~~g~~-----~~~~~~~a~~~Gir~vgpnc 125 (140)
T 1iuk_A 87 LPEVLAL-RPGLVWLQSGIR-----HPEFEKALKEAGIPVVADRC 125 (140)
T ss_dssp HHHHHHH-CCSCEEECTTCC-----CHHHHHHHHHTTCCEEESCC
T ss_pred HHHHHHc-CCCEEEEcCCcC-----HHHHHHHHHHcCCEEEcCCc
Confidence 3444444 677777652221 38999999999999998887
No 365
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=23.10 E-value=2.5e+02 Score=23.49 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=35.7
Q ss_pred ecCCCCCCCCHHHHHHHHh---hcCCcEEEEcCC-CCC---CccCHHHHHHHHHHc---CCEEEEEc
Q 022564 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGAS-AYA---RLYDYERIRKVCNKQ---KAIMLADM 230 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~~~tk~i~l~~~-n~~---~~~~l~~I~~ia~~~---~~~vivD~ 230 (295)
+.+ +++.+|.+.+++.++ +..+..|+++.+ .-. +..+-.++.+.+.+. .+.||+=.
T Consensus 22 PF~-~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv 87 (303)
T 2wkj_A 22 PFD-QQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV 87 (303)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec
Confidence 344 568999999998775 236788888633 222 344455666666553 57777743
No 366
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.09 E-value=1e+02 Score=25.22 Aligned_cols=50 Identities=6% Similarity=0.156 Sum_probs=37.3
Q ss_pred CCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcC--CEEEEEcc
Q 022564 182 IDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQK--AIMLADMA 231 (295)
Q Consensus 182 id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~--~~vivD~a 231 (295)
+.++++.+.+.+.++.+|.++....+....+.++.+..++.+ +.|++=++
T Consensus 161 vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 161 VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 467888777776699999998665566667888888887764 67777665
No 367
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=22.91 E-value=1e+02 Score=25.90 Aligned_cols=52 Identities=12% Similarity=0.104 Sum_probs=35.2
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
-.+.++++++. ..+.+++.....+ ..+.++|.++|+++++.++-.++ .|.+.
T Consensus 83 ~~~~v~ea~~~-Gi~~vVi~t~G~~-~~~~~~l~~~A~~~gi~viGPNc--~Gii~ 134 (294)
T 2yv1_A 83 AKDAVFEAIDA-GIELIVVITEHIP-VHDTMEFVNYAEDVGVKIIGPNT--PGIAS 134 (294)
T ss_dssp HHHHHHHHHHT-TCSEEEECCSCCC-HHHHHHHHHHHHHHTCEEECSSC--CEEEE
T ss_pred HHHHHHHHHHC-CCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEEcCCC--ceeec
Confidence 35666777765 7886665433332 34578999999999998887775 55554
No 368
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=22.85 E-value=1.1e+02 Score=21.66 Aligned_cols=51 Identities=10% Similarity=0.083 Sum_probs=30.1
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEE-EEcccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIML-ADMAHISG 235 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vi-vD~a~~~g 235 (295)
..+..++++..+.+++++.....+. .-...|..+|++++++++ ++...-+|
T Consensus 34 ~~~v~kal~~gka~lViiA~D~~~~-~~~~~l~~lc~~~~Vp~~~~~sk~eLG 85 (120)
T 1vq8_F 34 TNETTKSIERGSAELVFVAEDVQPE-EIVMHIPELADEKGVPFIFVEQQDDLG 85 (120)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCSSG-GGTTTHHHHHHTTCCCEEEESCHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCChH-HHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 4566777776578888885221110 113466678999998754 44433344
No 369
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=22.83 E-value=95 Score=27.80 Aligned_cols=49 Identities=8% Similarity=0.014 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
..+.+++++.++..-..+|.+.....|.+.+..+++++|+++|+.+++-
T Consensus 332 ~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~ 380 (444)
T 1w6t_A 332 VTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVS 380 (444)
T ss_dssp TTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEec
Confidence 4567777777765345666665555577788889999999999998873
No 370
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=22.71 E-value=1.8e+02 Score=23.34 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=26.1
Q ss_pred CCcEEEEcCCC-CCCccCHHHHHHHHHHcCCEEEE
Q 022564 195 RPKLIVAGASA-YARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 195 ~tk~i~l~~~n-~~~~~~l~~I~~ia~~~~~~viv 228 (295)
.+.+++.--.+ .|......++.++|++||+.++.
T Consensus 167 ~Pa~vicEi~~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELTNDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEEeCCCCCccCHHHHHHHHHHcCCCEEE
Confidence 57777654333 37888999999999999998774
No 371
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=22.69 E-value=1e+02 Score=25.92 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=36.1
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
-++.++++++. ..+.+++.....+ ..+.++|.++|+++++.++-.++ .|.+.
T Consensus 84 ~~~~v~ea~~~-Gi~~vVi~t~G~~-~~~~~~l~~~A~~~gi~viGPNc--~Gii~ 135 (297)
T 2yv2_A 84 APDAVYEAVDA-GIRLVVVITEGIP-VHDTMRFVNYARQKGATIIGPNC--PGAIT 135 (297)
T ss_dssp HHHHHHHHHHT-TCSEEEECCCCCC-HHHHHHHHHHHHHHTCEEECSSS--CEEEE
T ss_pred HHHHHHHHHHC-CCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEEcCCC--CeeEc
Confidence 46777777776 7886665433332 34577999999999998887765 55554
No 372
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=22.68 E-value=1.1e+02 Score=22.62 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=26.7
Q ss_pred CHHHHHHHHhhcCCcEEEEc---CCCCCC--ccC-HHHHHHHHHHcCCEEEEEc
Q 022564 183 DYDQLEKSATLFRPKLIVAG---ASAYAR--LYD-YERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~---~~n~~~--~~~-l~~I~~ia~~~~~~vivD~ 230 (295)
+++++.+.++..++++++++ +++.+. ... -+.+.++|+++++.++ |.
T Consensus 91 ~~~~~i~~~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~v-d~ 143 (185)
T 3hp4_A 91 NLTALVKKSQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHLM-NF 143 (185)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEEE-CC
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEEE-cc
Confidence 34445555555467777776 333331 112 2366788999987754 54
No 373
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=22.62 E-value=70 Score=27.89 Aligned_cols=50 Identities=6% Similarity=0.007 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+++++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 250 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 250 AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 44789999988764577887766556778888999999999999776654
No 374
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=22.52 E-value=73 Score=26.99 Aligned_cols=51 Identities=10% Similarity=0.147 Sum_probs=33.9
Q ss_pred CCHHHHHHHHh---h-cCCcEEEE-cCCCCCC---ccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 182 IDYDQLEKSAT---L-FRPKLIVA-GASAYAR---LYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 182 id~e~l~~~i~---~-~~tk~i~l-~~~n~~~---~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.++++++.+++ . -+.+++++ +.++++. ..|+..|..+.+ .+++|+.|..|+
T Consensus 166 ~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHs 224 (298)
T 3fs2_A 166 LAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHS 224 (298)
T ss_dssp CCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCc
Confidence 46655555443 2 24566666 3555542 257888887766 899999999998
No 375
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=22.50 E-value=3.3e+02 Score=22.62 Aligned_cols=102 Identities=13% Similarity=-0.022 Sum_probs=51.7
Q ss_pred eEEeCCChH-HHHHHHHhhcCCCCeEEEecCCCCcccCccccccccccccceeeeEEEeeecCCCCCCCCHHHHHHHHhh
Q 022564 115 NVQSLSGSP-SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATL 193 (295)
Q Consensus 115 ~v~~~sG~~-a~~~~~~al~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~id~e~l~~~i~~ 193 (295)
.|++|.++. .-..++..+++.|.+|.+..-.-.+. +..... ...+....+..+..++ -|.+.+.+++++
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~~--~~~l~~~~v~~~~~Dl------~d~~~l~~~~~~ 81 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS--PSKAKI--FKALEDKGAIIVYGLI------NEQEAMEKILKE 81 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC--HHHHHH--HHHHHHTTCEEEECCT------TCHHHHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC--hhHHHH--HHHHHhCCcEEEEeec------CCHHHHHHHHhh
Confidence 355544333 33337777777777777654211110 000000 0001111234444222 378999999985
Q ss_pred cCCcEEEEcCCCCCCccCHHHHHHHHHHcC-CEEE
Q 022564 194 FRPKLIVAGASAYARLYDYERIRKVCNKQK-AIML 227 (295)
Q Consensus 194 ~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~-~~vi 227 (295)
.++..|+.+... ........|.+.|++.+ +-.+
T Consensus 82 ~~~d~Vi~~a~~-~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 82 HEIDIVVSTVGG-ESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TTCCEEEECCCG-GGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCCEEEECCch-hhHHHHHHHHHHHHHcCCceEE
Confidence 457777665211 12334568889999988 6433
No 376
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=22.48 E-value=93 Score=26.79 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=34.7
Q ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccc
Q 022564 184 YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 238 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~ 238 (295)
.+.+.+++.....+.+++-....+. .+.++|.++|+++|+.++==++ .|.+.
T Consensus 93 ~~ai~ea~~~~Gv~~vViiT~G~~e-~~~~~l~~~a~~~g~rliGPNc--~Gii~ 144 (334)
T 3mwd_B 93 YDSTMETMNYAQIRTIAIIAEGIPE-ALTRKLIKKADQKGVTIIGPAT--VGGIK 144 (334)
T ss_dssp HHHHHHHTTSTTCCEEEECCSCCCH-HHHHHHHHHHHHHTCEEECSSC--CCEEE
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCH-HHHHHHHHHHHHcCCEEEccCC--ccccC
Confidence 4666677763378877764444443 4678999999999998774443 55544
No 377
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=22.38 E-value=1.4e+02 Score=24.31 Aligned_cols=46 Identities=11% Similarity=0.053 Sum_probs=30.9
Q ss_pred HHHHHHHHhhcCCcEEEEcCCC---------CC---CccCHHHHHHHHHHcCCEEEEEc
Q 022564 184 YDQLEKSATLFRPKLIVAGASA---------YA---RLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 184 ~e~l~~~i~~~~tk~i~l~~~n---------~~---~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
++.+++++.. ..++|.+=..+ .+ ...-.+++.++|+++++.+|++.
T Consensus 46 ~~~~~~al~~-Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALAG-GVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHT-TCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHC-CCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 5677777776 78888884222 11 12234678899999999888743
No 378
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=22.36 E-value=55 Score=27.43 Aligned_cols=24 Identities=4% Similarity=-0.004 Sum_probs=20.0
Q ss_pred cCHHHHHHHHHHcCCEEEEEcccc
Q 022564 210 YDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
.-++++.+.|.++|++||+|--+.
T Consensus 80 ~~ld~~v~~a~~~Gi~Vild~H~~ 103 (303)
T 7a3h_A 80 EKVKEAVEAAIDLDIYVIIDWHIL 103 (303)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEeccc
Confidence 447788999999999999997543
No 379
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=22.32 E-value=1.3e+02 Score=25.70 Aligned_cols=51 Identities=8% Similarity=0.017 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
..+.+++++.++.....++.+.....|.+.+..+|+++|+++|+.++.=+.
T Consensus 223 ~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~ 273 (342)
T 2okt_A 223 ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGM 273 (342)
T ss_dssp CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBCS
T ss_pred CCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcCC
Confidence 457888988887645677776665567788899999999999998777643
No 380
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=22.32 E-value=92 Score=26.83 Aligned_cols=52 Identities=8% Similarity=0.045 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
...+.+++++.++.....+|.+.....|.+.+..+|+++|+++|+.+++-+.
T Consensus 242 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 293 (354)
T 3jva_A 242 SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCM 293 (354)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 3567889988887645778877766667788899999999999999987554
No 381
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=22.26 E-value=57 Score=26.94 Aligned_cols=20 Identities=10% Similarity=0.262 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCEEEEEc
Q 022564 211 DYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~ 230 (295)
.++++.++|+++|++||.|.
T Consensus 91 ~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 91 DMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEe
Confidence 46889999999999999885
No 382
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=22.16 E-value=92 Score=26.90 Aligned_cols=50 Identities=4% Similarity=-0.033 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS 295 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45788899888764567777765555778888999999999999887643
No 383
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=22.05 E-value=1e+02 Score=21.37 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=35.2
Q ss_pred CcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEccccccccccCCCCCCCCcceEEEeCCC
Q 022564 196 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 257 (295)
Q Consensus 196 tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a~~~g~~~~~~~~~~~~~~D~~~~s~~ 257 (295)
-|++++|.+..++-.=.++|.+.++++|+-+-++...... +... +..+|+++.+.+
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~-~~~~-----~~~~D~Ii~t~~ 60 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETR-LSEV-----VDRFDVVLLAPQ 60 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTT-HHHH-----TTTCSEEEECSC
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHH-HHhh-----cCCCCEEEECCc
Confidence 3567778777764365779999999999865555442222 2111 123888877765
No 384
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=21.75 E-value=76 Score=27.61 Aligned_cols=50 Identities=2% Similarity=-0.162 Sum_probs=39.4
Q ss_pred CCCC-HHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 180 GYID-YDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 180 ~~id-~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
...+ .+++++.++.....+|.+.....|.+.+..+|+++|+++|+.++.=
T Consensus 259 ~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 259 SAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 3457 8999999876456778776666677888999999999999876665
No 385
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.72 E-value=1.8e+02 Score=24.29 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=34.6
Q ss_pred ecCCCCCCCCHHHHHHHHh---hcCCcEEEEc-CCCCC---CccCHHHHHHHHHHc---CCEEEE
Q 022564 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAG-ASAYA---RLYDYERIRKVCNKQ---KAIMLA 228 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~~~tk~i~l~-~~n~~---~~~~l~~I~~ia~~~---~~~viv 228 (295)
+.+ +++.+|.+.+++.++ +.....++++ .+.-. +..+-.++.+.+.+. .+.|++
T Consensus 18 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMN-QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455 568999999998775 2367888886 33332 444455666666553 467776
No 386
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=21.72 E-value=89 Score=27.00 Aligned_cols=50 Identities=4% Similarity=-0.090 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+++++|+++|+.+++=+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 248 LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 45788999988764567777765556778889999999999999877543
No 387
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=21.67 E-value=96 Score=22.68 Aligned_cols=49 Identities=12% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.++++..+.. ++.+|+++.-.... ..-.++.+..+++|+-+-+-.+
T Consensus 51 ~l~~e~l~~ll~~-~pevliiGTG~~~~-~l~p~~~~~l~~~GI~vE~m~T 99 (132)
T 2gm2_A 51 QLQPAHMDAVLAL-NPAVILLGTGERQQ-FPSTDVLAACLTRGIGLEAMTN 99 (132)
T ss_dssp GCCTTTSHHHHHH-CCSEEEEECTTSCC-CCCHHHHHHHHHHTCEEEEECH
T ss_pred cCCHHHHHHHHhc-CCCEEEECCCCCCC-cCCHHHHHHHHHcCCEEEEeCH
Confidence 5677788877776 79999997444444 3446788899999987665544
No 388
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=21.54 E-value=54 Score=31.44 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=21.3
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
+..+++++++-||++|+-||.|.+
T Consensus 319 t~edfk~LV~~aH~~GI~VilD~V 342 (695)
T 3zss_A 319 TLDDFDHFVTEAGKLGLEIALDFA 342 (695)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEee
Confidence 456788999999999999999987
No 389
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=21.43 E-value=1.3e+02 Score=24.24 Aligned_cols=35 Identities=6% Similarity=-0.056 Sum_probs=22.6
Q ss_pred CCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 195 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 195 ~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
+...|++....+-...-++.+.+++ ..|+.|++=+
T Consensus 101 ~~dvV~IDEaQFf~~~~v~~l~~la-~~gi~Vi~~G 135 (219)
T 3e2i_A 101 NVDVIGIDEVQFFDDEIVSIVEKLS-ADGHRVIVAG 135 (219)
T ss_dssp TCSEEEECCGGGSCTHHHHHHHHHH-HTTCEEEEEE
T ss_pred CCCEEEEechhcCCHHHHHHHHHHH-HCCCEEEEee
Confidence 6778888744443223356667777 5799988743
No 390
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=21.40 E-value=1.5e+02 Score=26.05 Aligned_cols=50 Identities=4% Similarity=0.001 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEc
Q 022564 181 YIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADM 230 (295)
Q Consensus 181 ~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~ 230 (295)
..+.+++++.++.....+|.+.....|.+.+..+|+++|+++|+.+..=+
T Consensus 274 ~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 323 (410)
T 3dip_A 274 LAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAPHX 323 (410)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEECS
T ss_pred cCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHcCCEEeeeC
Confidence 45789999998764567777777777888889999999999999886543
No 391
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=21.35 E-value=78 Score=27.17 Aligned_cols=24 Identities=13% Similarity=0.145 Sum_probs=18.9
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
...+.++|.+.|+++|+.+.+---
T Consensus 130 ~~~ea~~l~~~a~~~g~~l~vg~~ 153 (393)
T 4fb5_A 130 AYADAERMLATAERSGKVAALGYN 153 (393)
T ss_dssp SHHHHHHHHHHHHHSSSCEEECCG
T ss_pred cHHHHHHhhhhHHhcCCccccccc
Confidence 455677899999999988877654
No 392
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=21.18 E-value=2.1e+02 Score=23.81 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=35.1
Q ss_pred ecCCCCCCCCHHHHHHHHh---h-cCCcEEEEcCC-CCC---CccCHHHHHHHHHHc---CCEEEEEc
Q 022564 174 RLNESTGYIDYDQLEKSAT---L-FRPKLIVAGAS-AYA---RLYDYERIRKVCNKQ---KAIMLADM 230 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~-~~tk~i~l~~~-n~~---~~~~l~~I~~ia~~~---~~~vivD~ 230 (295)
+.+ +++.+|.+.+++.++ + ..+..|+++.+ .-. +..+-.++.+.+.+. .+.||+=.
T Consensus 14 Pf~-~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 80 (293)
T 1f6k_A 14 SFN-EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV 80 (293)
T ss_dssp CBC-TTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC
T ss_pred CCC-CCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec
Confidence 344 568999999988764 3 36788888632 222 444455666666543 47777543
No 393
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=21.15 E-value=1e+02 Score=27.42 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=34.2
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+..++++.++..-..+|.+.....|.+.+..+|+++|+++|+.+++
T Consensus 320 ~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 320 NVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp CHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4777777776534566666555556777888999999999998876
No 394
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=26.50 E-value=20 Score=25.72 Aligned_cols=20 Identities=20% Similarity=0.235 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCEEEEEcc
Q 022564 212 YERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 212 l~~I~~ia~~~~~~vivD~a 231 (295)
-.+|.++|+++|+.|+.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (114)
T 3b0z_B 29 ALRIREIGAEHRVPTLEAPP 48 (114)
Confidence 45889999999999999976
No 395
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.78 E-value=60 Score=26.95 Aligned_cols=26 Identities=4% Similarity=0.220 Sum_probs=21.1
Q ss_pred CccCHHHHHHHHHHcCCEEEEEcccc
Q 022564 208 RLYDYERIRKVCNKQKAIMLADMAHI 233 (295)
Q Consensus 208 ~~~~l~~I~~ia~~~~~~vivD~a~~ 233 (295)
....++++.+.|+++|++||+|--+.
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H~~ 87 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVHDA 87 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 34457899999999999999996543
No 396
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=20.68 E-value=1.3e+02 Score=25.11 Aligned_cols=51 Identities=12% Similarity=0.183 Sum_probs=33.2
Q ss_pred CCCHHHHHHHH---hh--cCCcEEEEcCCCCC--CccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSA---TL--FRPKLIVAGASAYA--RLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i---~~--~~tk~i~l~~~n~~--~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+++.+.+ .+ .+.++++++....+ ...-+.++.+.|+++|+.+++|-.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 171 (320)
T 3ie7_A 114 TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNS 171 (320)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 56666665432 11 25788888532222 233467888889999999999986
No 397
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=20.55 E-value=66 Score=26.63 Aligned_cols=22 Identities=5% Similarity=0.172 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHcCCEEEEEccc
Q 022564 211 DYERIRKVCNKQKAIMLADMAH 232 (295)
Q Consensus 211 ~l~~I~~ia~~~~~~vivD~a~ 232 (295)
-++++.+.|.++|+.||+|--+
T Consensus 80 ~ld~~v~~a~~~Gi~vild~h~ 101 (293)
T 1tvn_A 80 RLDTVVNAAIAEDMYVIIDFHS 101 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEcCC
Confidence 3568899999999999999754
No 398
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=20.52 E-value=2.1e+02 Score=23.73 Aligned_cols=51 Identities=10% Similarity=0.116 Sum_probs=32.7
Q ss_pred CCCHHHHHHHHh---h--cCCcEEEEcCCCC--CCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 181 YIDYDQLEKSAT---L--FRPKLIVAGASAY--ARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 181 ~id~e~l~~~i~---~--~~tk~i~l~~~n~--~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+++++... + .+.++++++.... ....-+.++.+.|+++++.+++|-.
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 167 (323)
T 2f02_A 110 TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTS 167 (323)
T ss_dssp BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECC
Confidence 466666554321 0 2578888753222 1234467888999999999999975
No 399
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=20.49 E-value=1.6e+02 Score=23.38 Aligned_cols=34 Identities=6% Similarity=0.103 Sum_probs=26.3
Q ss_pred CCcEEEEcCC-CC-CCccCHHHHHHHHHHcCCEEEE
Q 022564 195 RPKLIVAGAS-AY-ARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 195 ~tk~i~l~~~-n~-~~~~~l~~I~~ia~~~~~~viv 228 (295)
.+.+++.--- |. |....+.++.++|++||+.++.
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 6777765433 33 7889999999999999997764
No 400
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=20.46 E-value=2e+02 Score=24.08 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=34.8
Q ss_pred ecCCCCCCCCHHHHHHHHh---hcCCcEEEEcCC-CCC---CccCHHHHHHHHHHc---CCEEEEEc
Q 022564 174 RLNESTGYIDYDQLEKSAT---LFRPKLIVAGAS-AYA---RLYDYERIRKVCNKQ---KAIMLADM 230 (295)
Q Consensus 174 ~~~~~~~~id~e~l~~~i~---~~~tk~i~l~~~-n~~---~~~~l~~I~~ia~~~---~~~vivD~ 230 (295)
+.+ +++.+|.+.+++.++ +..+..|+++.+ .-. +..+-.++.+.+.+. .+.||+=.
T Consensus 23 Pf~-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv 88 (301)
T 1xky_A 23 PFD-INGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT 88 (301)
T ss_dssp CBC-TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred cCC-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC
Confidence 344 568999999998875 236788888633 222 344455666666543 46676543
No 401
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=20.41 E-value=1e+02 Score=27.01 Aligned_cols=50 Identities=8% Similarity=0.052 Sum_probs=39.0
Q ss_pred CCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEE
Q 022564 180 GYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLAD 229 (295)
Q Consensus 180 ~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD 229 (295)
...+.+++++.++.....+|.+.....|.+.+..+++++|+++|+.++.=
T Consensus 255 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 255 AAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp TCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 34578999998876457778776555577778889999999999987754
No 402
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=20.37 E-value=1.1e+02 Score=27.32 Aligned_cols=46 Identities=2% Similarity=-0.053 Sum_probs=33.2
Q ss_pred CHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEE
Q 022564 183 DYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLA 228 (295)
Q Consensus 183 d~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~viv 228 (295)
+++++++.++..-..+|.+-....|.+.+..+++++|+++|+.+++
T Consensus 326 ~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 326 NPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp CHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 5777777776523455655554557777888999999999997765
No 403
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=20.18 E-value=74 Score=26.82 Aligned_cols=38 Identities=11% Similarity=0.221 Sum_probs=27.7
Q ss_pred CcEEEE-cCCCCCC---ccCHHHHHHHHHHcCCEEEEEccccc
Q 022564 196 PKLIVA-GASAYAR---LYDYERIRKVCNKQKAIMLADMAHIS 234 (295)
Q Consensus 196 tk~i~l-~~~n~~~---~~~l~~I~~ia~~~~~~vivD~a~~~ 234 (295)
.+++++ +.++++. ..++..|..+.+ .+++|++|..|+.
T Consensus 166 ~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~D~sHs~ 207 (288)
T 3tml_A 166 DRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVFDATHSV 207 (288)
T ss_dssp CCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEEEHHHHT
T ss_pred CcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEEcCCccc
Confidence 456666 3555652 248999888765 8999999999983
No 404
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=20.17 E-value=68 Score=26.70 Aligned_cols=22 Identities=14% Similarity=0.437 Sum_probs=19.1
Q ss_pred cCHHHHHHHHHHcCCEEEEEcc
Q 022564 210 YDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 210 ~~l~~I~~ia~~~~~~vivD~a 231 (295)
..++++.+.|+++|++||+|--
T Consensus 65 ~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 65 SDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHHHHHHCCCEEEEEec
Confidence 4578999999999999999954
No 405
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=20.06 E-value=1.9e+02 Score=24.02 Aligned_cols=52 Identities=8% Similarity=-0.087 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEEcc
Q 022564 178 STGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMA 231 (295)
Q Consensus 178 ~~~~id~e~l~~~i~~~~tk~i~l~~~n~~~~~~l~~I~~ia~~~~~~vivD~a 231 (295)
.++.+|..++.++..- ...+|++...-. ....++++.+.|++.|.-++++..
T Consensus 126 Kdfi~d~~qi~ea~~~-GAD~VlLi~a~L-~~~~l~~l~~~a~~lGl~~lvevh 177 (272)
T 3tsm_A 126 KDFLFDPYQVYEARSW-GADCILIIMASV-DDDLAKELEDTAFALGMDALIEVH 177 (272)
T ss_dssp ESCCCSTHHHHHHHHT-TCSEEEEETTTS-CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCccCCHHHHHHHHHc-CCCEEEEccccc-CHHHHHHHHHHHHHcCCeEEEEeC
Confidence 3577888888887654 778877753332 234588899999999999988864
Done!