Query 022565
Match_columns 295
No_of_seqs 154 out of 577
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 07:32:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htn_A Putative DNA binding pr 100.0 4.8E-28 1.6E-32 205.5 13.6 112 94-210 16-130 (149)
2 2dt4_A Hypothetical protein PH 100.0 4.4E-28 1.5E-32 203.5 11.7 111 94-210 10-123 (143)
3 2h6l_A Hypothetical protein; N 99.9 3.9E-27 1.3E-31 198.3 11.3 110 94-210 10-122 (146)
4 2p6y_A Hypothetical protein VC 99.9 2.5E-26 8.5E-31 193.4 14.7 108 93-209 2-110 (142)
5 2hx0_A Putative DNA-binding pr 99.9 5.7E-26 1.9E-30 193.7 16.3 113 88-209 13-126 (154)
6 3hwu_A Putative DNA-binding pr 99.9 4.3E-26 1.5E-30 192.9 14.0 112 94-210 13-127 (147)
7 1xv2_A ALDC, hypothetical prot 56.5 28 0.00097 31.4 7.1 94 105-203 98-202 (237)
8 3jsr_A ALL0216 protein; struct 32.0 17 0.00057 30.2 1.4 19 7-25 73-91 (119)
9 1t3g_A X-linked interleukin-1 16.5 86 0.003 25.7 2.9 27 100-126 51-77 (159)
10 3k2v_A Putative D-arabinose 5- 16.1 77 0.0026 24.2 2.3 72 64-135 2-82 (149)
No 1
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=99.95 E-value=4.8e-28 Score=205.51 Aligned_cols=112 Identities=16% Similarity=0.264 Sum_probs=102.9
Q ss_pred eeEEEEecCCCcHHHHHHHHHHhCCccEEEEEeeceeeeEEEeCCCCCC---CceeeeccEEEEEeeeeeeecCCCCCcC
Q 022565 94 TPHVITINAGEDVMMKVISFSQQGPRAICILSANGVISNVTLRQPDSSG---GTLTYEGRFEILSLSGSFMLTESQGTRS 170 (295)
Q Consensus 94 kphVIRL~pGEDVvesI~~farq~~iai~ILSAIGAVSnVTLr~~d~~~---~t~t~eGpfEILSLsGnIs~~dgg~t~~ 170 (295)
+.|++||++||||+++|.+||+++++..|+++++|++++|+|+|++.+. ...+++|+|||+||+|||++.|+ +
T Consensus 16 r~~~lrl~~Gedl~~~l~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EI~sl~Gti~~~dG----~ 91 (149)
T 3htn_A 16 NKYIVSINNHTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMNE----Q 91 (149)
T ss_dssp TEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEECTTTCCEEEEEECSCEEEEEEEEEEEEETT----E
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEEEeeeEEEEccCCCcccceeEEecCceEEEEeEEEEEccCC----C
Confidence 5899999999999999999999999988888999999999999998865 36799999999999999999876 4
Q ss_pred CCCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeCC
Q 022565 171 RSGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFLP 210 (295)
Q Consensus 171 p~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~~ 210 (295)
|+.|+|++|+|+||+++||||.++. +..++||+|.++..
T Consensus 92 p~~HlH~sl~~~~G~v~gGHl~~g~-V~~t~Ei~i~~~~~ 130 (149)
T 3htn_A 92 VYLHLHITVGRSDYSALAGHLLSAI-QNGAGEFVVEDYSE 130 (149)
T ss_dssp EEEEEEEEEECTTSBEEEEEEEEEE-EEEEEEEEEEECCS
T ss_pred ceEEEEEEEECCCCCEEeEEeCCCE-EEEEEEEEEEEcCC
Confidence 8999999999999999999999985 47789999999843
No 2
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=99.95 E-value=4.4e-28 Score=203.50 Aligned_cols=111 Identities=17% Similarity=0.281 Sum_probs=101.9
Q ss_pred eeEEEEecCCCcHHHHHHHHHHhCCccEEEEEeeceeeeEEEeCCCCCC---CceeeeccEEEEEeeeeeeecCCCCCcC
Q 022565 94 TPHVITINAGEDVMMKVISFSQQGPRAICILSANGVISNVTLRQPDSSG---GTLTYEGRFEILSLSGSFMLTESQGTRS 170 (295)
Q Consensus 94 kphVIRL~pGEDVvesI~~farq~~iai~ILSAIGAVSnVTLr~~d~~~---~t~t~eGpfEILSLsGnIs~~dgg~t~~ 170 (295)
++|++||++||||+++|.+||+++++..|+++++|++++|+|+|++.+. ...+++|+|||+||+|||++.|+ +
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~~~~~~~~g~~EIlsl~Gti~~~~g----~ 85 (143)
T 2dt4_A 10 RTYLFRVPEGEELLTYIKNFCKKEGIETAIINGIGTLKNPKIGYFLEEKKEYKVIPLKGSYELISLIGNVSLKDG----E 85 (143)
T ss_dssp EEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEECCSEEEEEEEEEEEEEETT----E
T ss_pred CEEEEEECCCCcHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEEeecCccCcceeEeecCCEEEEEeEEEEECCCC----C
Confidence 7999999999999999999999988888888999999999999998775 36889999999999999999876 4
Q ss_pred CCCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeCC
Q 022565 171 RSGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFLP 210 (295)
Q Consensus 171 p~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~~ 210 (295)
|+.|+|++++|+||+++||||.+++ .. ++||++.+|..
T Consensus 86 p~~HlHi~l~~~~G~v~GGHl~~g~-v~-t~Ev~i~~~~~ 123 (143)
T 2dt4_A 86 PFVHAHVSLGNEEGIVFGGHLVEGE-VF-VAEIFLQELKG 123 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEE-EE-EEEEEEEEEEE
T ss_pred ceeeEEEEEECCCCCEeCCCCCCCc-eE-EEEEEEEEcCC
Confidence 8999999999999999999999888 56 89999999943
No 3
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=99.94 E-value=3.9e-27 Score=198.33 Aligned_cols=110 Identities=23% Similarity=0.272 Sum_probs=101.0
Q ss_pred eeEEEEecCCCcHHHHHHHHHHhCCccEEEEEeeceeeeEEEeCCCCCC---CceeeeccEEEEEeeeeeeecCCCCCcC
Q 022565 94 TPHVITINAGEDVMMKVISFSQQGPRAICILSANGVISNVTLRQPDSSG---GTLTYEGRFEILSLSGSFMLTESQGTRS 170 (295)
Q Consensus 94 kphVIRL~pGEDVvesI~~farq~~iai~ILSAIGAVSnVTLr~~d~~~---~t~t~eGpfEILSLsGnIs~~dgg~t~~ 170 (295)
++|++||++||||+++|.+||+++++..++++++|++++++|++++.+. ..++++|+|||+||+|||++.|+ +
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EIlsl~Gti~~~dg----~ 85 (146)
T 2h6l_A 10 KGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMKDS----K 85 (146)
T ss_dssp EEEEEECCTTSBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEEEEEEEEEETT----E
T ss_pred CEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEECCCCCCcceeEEEecCcEEEEEeEEEEECCCC----C
Confidence 6999999999999999999999988877777999999999999998876 37899999999999999999876 4
Q ss_pred CCCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeCC
Q 022565 171 RSGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFLP 210 (295)
Q Consensus 171 p~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~~ 210 (295)
|+.|+|++++ +||+++||||.+++| .|+||+|.+|..
T Consensus 86 p~~HlHi~l~-~~G~v~gGHl~~g~V--~t~Evvi~~~~~ 122 (146)
T 2h6l_A 86 PFCHIHVLLG-KDGEVYGGHLFSAEV--FACEVFVLPLSG 122 (146)
T ss_dssp EEEEEEEEEE-EBTEEEEEEEEEEEE--EEEEEEEEECBS
T ss_pred ceeeEEEEEC-CCCcEEeeecCCCEE--EEEEEEEEEcCC
Confidence 8999999999 999999999999985 589999999943
No 4
>2p6y_A Hypothetical protein VCA0587; NESG, Q9KM02_vibch, VCR80, structural genomics, PSI-2, prote structure initiative; 1.63A {Vibrio cholerae}
Probab=99.94 E-value=2.5e-26 Score=193.37 Aligned_cols=108 Identities=26% Similarity=0.385 Sum_probs=97.9
Q ss_pred ceeEEEEecCCCcHHHHHHHHHHhCCc-cEEEEEeeceeeeEEEeCCCCCCCceeeeccEEEEEeeeeeeecCCCCCcCC
Q 022565 93 FTPHVITINAGEDVMMKVISFSQQGPR-AICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMLTESQGTRSR 171 (295)
Q Consensus 93 ~kphVIRL~pGEDVvesI~~farq~~i-ai~ILSAIGAVSnVTLr~~d~~~~t~t~eGpfEILSLsGnIs~~dgg~t~~p 171 (295)
|++|++||++||||+++|.+||+++++ +++|++++|++++++|++|+.+. +.+++|+|||+||+|||.++ +
T Consensus 2 ~r~~~lrL~~Gedl~~~i~~~~~~~~i~~a~v~~~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~-~------ 73 (142)
T 2p6y_A 2 IHLIALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSVS-TLQVSAPFEILSLSGTLTYQ-H------ 73 (142)
T ss_dssp CEEEEEEECTTCBHHHHHHHHHHHTTCSSEEEEEEEEEEEEEEEECTTSSC-EEEECSCEEEEEEEEEECSS-C------
T ss_pred CcEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEEEEEeEEEECCCCCc-cEecCCcEEEEEeEEEEeCC-C------
Confidence 899999999999999999999999666 67777999999999999999875 78899999999999999985 2
Q ss_pred CCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeC
Q 022565 172 SGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFL 209 (295)
Q Consensus 172 ~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~ 209 (295)
.|+|++++|+||+++||||.+++++..|+||+|.+|.
T Consensus 74 -~HlHisl~~~~G~v~GGHl~~g~~V~~t~Ev~i~~~~ 110 (142)
T 2p6y_A 74 -CHLHIAVADAQGRVWGGHLLEGNLINTTAELMIHHYP 110 (142)
T ss_dssp -EEEEEEEECTTSCEEEEEECTTCEECC-EEEEEEECT
T ss_pred -CEEEEEEECCCCCEEccccCCCCeEEEEEEEEEEEcc
Confidence 5999999999999999999986666889999999984
No 5
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=99.94 E-value=5.7e-26 Score=193.67 Aligned_cols=113 Identities=23% Similarity=0.413 Sum_probs=101.9
Q ss_pred cCCCCceeEEEEecCCCcHHHHHHHHHHhCCc-cEEEEEeeceeeeEEEeCCCCCCCceeeeccEEEEEeeeeeeecCCC
Q 022565 88 SVGTNFTPHVITINAGEDVMMKVISFSQQGPR-AICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMLTESQ 166 (295)
Q Consensus 88 s~g~~~kphVIRL~pGEDVvesI~~farq~~i-ai~ILSAIGAVSnVTLr~~d~~~~t~t~eGpfEILSLsGnIs~~dgg 166 (295)
+....+++|++||++||||+++|.+||+++++ +++|++++|++++++|||++.+. +.+++|+|||+||+|||+++ +
T Consensus 13 ~~~~~~r~~vlrL~~Gedl~~~i~~~~~~~gi~~a~v~s~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~-~- 89 (154)
T 2hx0_A 13 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEA-TTSLTGTFEVISLNGTLELT-G- 89 (154)
T ss_dssp CSCCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTCSS-CEEEEEEEEEEEEEEEEETT-E-
T ss_pred CCCCCccEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEeeeEEeEEEccCCCc-cEecCCcEEEEEeeeeEeCC-C-
Confidence 45567999999999999999999999988555 67777999999999999999876 78999999999999999985 2
Q ss_pred CCcCCCCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeC
Q 022565 167 GTRSRSGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFL 209 (295)
Q Consensus 167 ~t~~p~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~ 209 (295)
.|+|++++|+||+++||||.+++++..++||+|.+|.
T Consensus 90 ------~HlHisl~~~~G~v~GGHL~~g~~V~~t~Ev~i~~~~ 126 (154)
T 2hx0_A 90 ------EHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELP 126 (154)
T ss_dssp ------EEEEEEEECTTSCEEEEEECTTCEEEEEEEEEEEECT
T ss_pred ------CEEEEEEECCCCCEEccccCCCCcEEEEEEEEEEEcc
Confidence 5999999999999999999987666789999999984
No 6
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=99.94 E-value=4.3e-26 Score=192.90 Aligned_cols=112 Identities=19% Similarity=0.272 Sum_probs=101.4
Q ss_pred eeEEEEecCCCcHHHHHHHHHHhCCccEEEEEeeceeeeEEEeCCCCCCC---ceeeeccEEEEEeeeeeeecCCCCCcC
Q 022565 94 TPHVITINAGEDVMMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGG---TLTYEGRFEILSLSGSFMLTESQGTRS 170 (295)
Q Consensus 94 kphVIRL~pGEDVvesI~~farq~~iai~ILSAIGAVSnVTLr~~d~~~~---t~t~eGpfEILSLsGnIs~~dgg~t~~ 170 (295)
+.+++||+|||||+++|.+||+++++..++++++|++++++|++++.+.+ ..+++ ++||+||+|||++.|+ +
T Consensus 13 ~~~~~rL~~Gedl~~~l~~~~~~~~i~~a~v~~iGsl~~~~l~~~~~~~~~y~~~~~~-~~Ei~sl~Gtis~~dG----~ 87 (147)
T 3hwu_A 13 TGYLMVLRHGDNVLQNLEQLARDEHIPSASFVGIGFMSEATFGFYDFGRKQFDPKTYR-NVEMANMTGSIAWKEG----K 87 (147)
T ss_dssp TEEEEEEETTCBHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEE-EEEEEEEEEEEEEETT----E
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCCEEEEEEEecccEEEEEeecCCcCccccEEec-CcEEEEEEEEEEcCCC----C
Confidence 46999999999999999999999999999999999999999999998652 56788 8999999999999876 4
Q ss_pred CCCceEEEEeCCCCcEEeeeecCceEEecceEEEEEEeCC
Q 022565 171 RSGGMSVSLASPDGRVVGGAVAGLLVAAGPVQVVVGSFLP 210 (295)
Q Consensus 171 p~~HlHISLAd~dGqV~GGHL~galIAAtTVEVVVgsf~~ 210 (295)
|+.|+|++++|.||+++||||.++.|...|+||+|..+..
T Consensus 88 p~~HlH~~~~d~~g~v~GGHL~~g~V~~~t~Ei~i~~~~~ 127 (147)
T 3hwu_A 88 PSIHAHGTVTDGTFQGAGGHLLGLTVGTGSCEITVTVYPQ 127 (147)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred ceEEEEEEEECCCCcEEeeEecCcEEEeEeEEEEEEEcCC
Confidence 9999999999999999999999996654599999998743
No 7
>1xv2_A ALDC, hypothetical protein, similar to alpha- acetolactate decarboxylase; structural genomics, MCSG; 2.00A {Staphylococcus aureus subsp} SCOP: d.290.1.1
Probab=56.45 E-value=28 Score=31.40 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHhCCccEEEEEeeceeeeEEEeCCCCCCCc-------eeeeccEEEEEeeeeee----ecCCCCCcCCCC
Q 022565 105 DVMMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGT-------LTYEGRFEILSLSGSFM----LTESQGTRSRSG 173 (295)
Q Consensus 105 DVvesI~~farq~~iai~ILSAIGAVSnVTLr~~d~~~~t-------~t~eGpfEILSLsGnIs----~~dgg~t~~p~~ 173 (295)
++-+.|.+.. .....+-+-.-|..++++.|--....++ ..-.-.|+.-...|++. |.--.+..-+-.
T Consensus 98 ~l~~~i~~~~--s~N~f~airi~G~F~~v~~R~vp~Q~~Py~~l~e~~~~Q~~f~~~~v~GTivGF~tP~~~~Gi~v~G~ 175 (237)
T 1xv2_A 98 VFAQIKNEML--SENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGF 175 (237)
T ss_dssp HHHHHHHHSS--CTTSCEEEEEEEEEEEEEEECCCCCCSSCCCTHHHHTTCCEEEEEEEEEEEEEEEECGGGBTTBCSEE
T ss_pred HHHHHHHhhh--ccccEEEEEEEEEeCeEEEEecCCCCCCCCCHHHHhcCCceEEEeccEEEEEEEecchhhcccCCcee
Confidence 3444444433 4456777888999999999986433211 11122266666666664 443222222333
Q ss_pred ceEEEEeCCCCcEEeeeecCceEEecceEE
Q 022565 174 GMSVSLASPDGRVVGGAVAGLLVAAGPVQV 203 (295)
Q Consensus 174 HlHISLAd~dGqV~GGHL~galIAAtTVEV 203 (295)
|+|.. +.| +.+||||.+-.+-..++++
T Consensus 176 HlHFi--sdD-r~~GGHVldf~~~~~~~~~ 202 (237)
T 1xv2_A 176 HIHFA--DDE-RAYGGHVLDFEVDDVVVEI 202 (237)
T ss_dssp EEEEE--ETT-SSCEEEEEEEEEEEEEEEE
T ss_pred EEEEE--cCC-CCCCcceEEEEecceEEEE
Confidence 55554 433 5599999987665555554
No 8
>3jsr_A ALL0216 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, NSR236, unknown funct; 1.80A {Nostoc SP} PDB: 3hze_A
Probab=31.99 E-value=17 Score=30.18 Aligned_cols=19 Identities=26% Similarity=0.651 Sum_probs=15.6
Q ss_pred CCchhhhhhhhhhhhcccc
Q 022565 7 SDSSWIAWMKIVISSVDRS 25 (295)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~ 25 (295)
.|..||.|||+-+.-|..+
T Consensus 73 Td~~fItwlKLRLe~V~~G 91 (119)
T 3jsr_A 73 TNSQFITWLKLRLEYVVTG 91 (119)
T ss_dssp SCHHHHHHHHHHHCSCEEE
T ss_pred cChHHHHHHHHhhhheEEE
Confidence 6899999999988766544
No 9
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=16.54 E-value=86 Score=25.74 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=24.1
Q ss_pred ecCCCcHHHHHHHHHHhCCccEEEEEe
Q 022565 100 INAGEDVMMKVISFSQQGPRAICILSA 126 (295)
Q Consensus 100 L~pGEDVvesI~~farq~~iai~ILSA 126 (295)
+.+|+++.+.|.+..++-.+.++|||-
T Consensus 51 ~~~G~~i~~~i~~~I~~Sr~~IvVlS~ 77 (159)
T 1t3g_A 51 LIPTGTYIEDVARCVDQSKRLIIVMTP 77 (159)
T ss_dssp CCCCTTHHHHHHHHHHTBSEEEEEECH
T ss_pred ccCccchHHHHHHHHHHcCEEEEEEcc
Confidence 679999999999999888888999875
No 10
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=16.14 E-value=77 Score=24.20 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=40.0
Q ss_pred eeecCCCCCCeeeeec---cCCccccccCCCCcee--EEEEecCCCcHHHHHHHHHHhCCccEEEEEe----eceeeeEE
Q 022565 64 YVKSSALDLPIFLNCH---FVGELHACSVGTNFTP--HVITINAGEDVMMKVISFSQQGPRAICILSA----NGVISNVT 134 (295)
Q Consensus 64 ~~~~~~~~~~~~~~~~---~~g~~~~~s~g~~~kp--hVIRL~pGEDVvesI~~farq~~iai~ILSA----IGAVSnVT 134 (295)
|.+.+++++.-...+. .+|....-.++.=|++ -++.+.+++.+.+.+..+.+.+...+.|+.. +|.|+.-.
T Consensus 2 ~~~~~~f~~~~~~~~~~~~~l~~~l~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~d 81 (149)
T 3k2v_A 2 NAEARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGD 81 (149)
T ss_dssp ------------------CHHHHHTTSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHH
T ss_pred cccccCCCHHHhhhcCCCchhchhcccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHH
Confidence 3445555544333222 3333333466777888 7889999999999998888887777888763 56555544
Q ss_pred E
Q 022565 135 L 135 (295)
Q Consensus 135 L 135 (295)
|
T Consensus 82 l 82 (149)
T 3k2v_A 82 L 82 (149)
T ss_dssp H
T ss_pred H
Confidence 4
Done!