Query 022566
Match_columns 295
No_of_seqs 489 out of 2162
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 07:33:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.7E-35 1.3E-39 240.1 21.1 159 130-294 2-160 (169)
2 1awc_B Protein (GA binding pro 100.0 4E-31 1.4E-35 211.5 20.1 152 132-290 2-153 (153)
3 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.4E-30 4.6E-35 211.9 21.0 156 131-292 13-168 (169)
4 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.8E-30 6E-35 209.1 18.1 157 131-294 4-161 (162)
5 3v31_A Ankyrin repeat family A 100.0 7.9E-30 2.7E-34 206.5 19.5 152 134-291 5-156 (167)
6 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.8E-30 3.3E-34 203.6 19.0 152 133-291 3-154 (156)
7 3v30_A DNA-binding protein rfx 100.0 7.7E-30 2.6E-34 207.6 18.4 152 135-291 5-156 (172)
8 3twr_A Tankyrase-2; ankyrin re 100.0 6E-30 2E-34 206.9 16.9 158 130-293 6-163 (165)
9 2rfm_A Putative ankyrin repeat 100.0 8.9E-30 3.1E-34 211.0 18.2 155 132-292 35-189 (192)
10 3f6q_A Integrin-linked protein 100.0 1.6E-29 5.4E-34 207.4 16.2 156 133-294 6-162 (179)
11 4b93_B Ankyrin repeat domain-c 100.0 7.7E-30 2.6E-34 223.5 15.2 154 132-293 86-239 (269)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 1.4E-28 4.8E-33 212.8 19.1 157 132-294 90-247 (253)
13 1d9s_A Cyclin-dependent kinase 100.0 2.5E-29 8.4E-34 197.3 12.3 132 158-294 3-135 (136)
14 2dzn_A Probable 26S proteasome 100.0 4.2E-28 1.4E-32 205.5 20.5 157 133-293 37-198 (228)
15 2rfa_A Transient receptor pote 100.0 2.4E-28 8.3E-33 207.8 19.0 155 133-293 4-181 (232)
16 3aji_A 26S proteasome non-ATPa 100.0 5.2E-28 1.8E-32 205.5 21.0 153 134-292 42-194 (231)
17 1s70_B 130 kDa myosin-binding 100.0 7.3E-28 2.5E-32 212.4 22.4 157 132-294 40-256 (299)
18 1oy3_D Transcription factor in 100.0 2.1E-28 7.1E-33 213.5 18.7 156 133-294 46-249 (282)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 3.3E-28 1.1E-32 210.4 19.2 157 132-294 57-214 (253)
20 4b93_B Ankyrin repeat domain-c 100.0 1.1E-28 3.6E-33 216.3 16.2 155 134-294 54-209 (269)
21 2f8y_A Notch homolog 1, transl 100.0 8.6E-28 2.9E-32 203.1 21.1 156 133-294 59-215 (223)
22 3hra_A Ankyrin repeat family p 100.0 5.9E-28 2E-32 200.8 19.4 154 133-292 40-200 (201)
23 2f8y_A Notch homolog 1, transl 100.0 1.1E-27 3.8E-32 202.4 20.8 157 132-294 25-182 (223)
24 1oy3_D Transcription factor in 100.0 4.4E-28 1.5E-32 211.4 18.2 159 132-294 9-216 (282)
25 3t8k_A Uncharacterized protein 100.0 3E-29 1E-33 208.1 9.9 152 134-292 8-176 (186)
26 2rfa_A Transient receptor pote 100.0 8.1E-28 2.8E-32 204.6 18.5 156 133-292 38-219 (232)
27 2etb_A Transient receptor pote 100.0 1.7E-28 5.9E-33 212.2 14.1 157 132-292 43-243 (256)
28 2jab_A H10-2-G3; HER2, darpin, 100.0 5.2E-28 1.8E-32 189.7 15.5 125 164-292 11-135 (136)
29 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-28 8.1E-33 208.8 14.5 157 132-294 45-208 (236)
30 2xai_A ASB-9, ankyrin repeat a 100.0 1.9E-27 6.4E-32 206.7 20.2 154 132-293 36-189 (261)
31 3hra_A Ankyrin repeat family p 100.0 1.9E-27 6.4E-32 197.8 19.3 160 133-294 6-169 (201)
32 4gpm_A Engineered protein OR26 100.0 9.6E-28 3.3E-32 195.9 17.1 122 169-294 6-127 (169)
33 3jxi_A Vanilloid receptor-rela 100.0 1.6E-28 5.5E-33 212.7 12.8 155 133-291 47-246 (260)
34 3aji_A 26S proteasome non-ATPa 100.0 2.5E-27 8.5E-32 201.3 19.7 157 133-294 7-163 (231)
35 3b7b_A Euchromatic histone-lys 100.0 6.4E-27 2.2E-31 199.5 20.8 145 132-278 77-222 (237)
36 1k1a_A B-cell lymphoma 3-encod 100.0 5.6E-27 1.9E-31 200.0 20.1 151 135-291 49-204 (241)
37 4hbd_A KN motif and ankyrin re 100.0 1.4E-27 4.7E-32 209.7 16.6 155 132-292 111-272 (276)
38 2pnn_A Transient receptor pote 100.0 7.9E-28 2.7E-32 210.1 14.8 158 132-293 54-256 (273)
39 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.3E-28 1.1E-32 209.0 12.0 153 133-292 6-161 (239)
40 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.1E-27 1.1E-31 181.4 16.2 125 166-294 1-125 (126)
41 3d9h_A CDNA FLJ77766, highly s 100.0 6.7E-27 2.3E-31 206.1 20.3 151 134-292 94-244 (285)
42 3b7b_A Euchromatic histone-lys 100.0 1E-26 3.5E-31 198.3 20.8 158 131-294 43-201 (237)
43 2dzn_A Probable 26S proteasome 100.0 8.4E-27 2.9E-31 197.4 20.0 155 134-293 4-163 (228)
44 2xai_A ASB-9, ankyrin repeat a 99.9 8.1E-27 2.8E-31 202.7 19.6 142 132-277 69-210 (261)
45 3c5r_A BARD-1, BRCA1-associate 99.9 3E-28 1E-32 191.1 9.5 125 163-291 6-130 (137)
46 1bi7_B P16INK4A, MTS1, multipl 99.9 8.8E-28 3E-32 192.8 12.1 135 134-271 14-149 (156)
47 1ikn_D Protein (I-kappa-B-alph 99.9 6.1E-28 2.1E-32 206.2 11.7 158 133-294 9-175 (236)
48 1n11_A Ankyrin; clathrin, BAND 99.9 6.4E-27 2.2E-31 217.4 19.3 155 133-293 246-400 (437)
49 3utm_A Tankyrase-1; tankyrase, 99.9 1.6E-26 5.4E-31 207.4 21.1 156 133-294 92-304 (351)
50 2etb_A Transient receptor pote 99.9 4E-27 1.4E-31 203.5 15.6 155 134-292 4-203 (256)
51 1wdy_A 2-5A-dependent ribonucl 99.9 3.6E-26 1.2E-30 199.0 21.5 155 133-292 6-170 (285)
52 3ljn_A Hypothetical protein; a 99.9 2.7E-27 9.2E-32 215.0 14.6 159 131-293 83-267 (364)
53 1k1a_A B-cell lymphoma 3-encod 99.9 3.6E-26 1.2E-30 195.0 20.5 157 132-294 9-174 (241)
54 3ljn_A Hypothetical protein; a 99.9 8.2E-27 2.8E-31 211.8 17.3 156 132-293 20-234 (364)
55 3d9h_A CDNA FLJ77766, highly s 99.9 3.9E-26 1.3E-30 201.1 20.3 153 134-293 61-213 (285)
56 2rfm_A Putative ankyrin repeat 99.9 7.5E-27 2.6E-31 193.3 14.1 129 162-294 30-158 (192)
57 1n11_A Ankyrin; clathrin, BAND 99.9 3.3E-26 1.1E-30 212.6 19.9 157 132-294 212-368 (437)
58 1wdy_A 2-5A-dependent ribonucl 99.9 8.2E-26 2.8E-30 196.7 21.0 159 132-294 105-277 (285)
59 2vge_A RELA-associated inhibit 99.9 4.6E-27 1.6E-31 201.0 12.0 141 148-292 1-145 (229)
60 3aaa_C Myotrophin, protein V-1 99.9 2.6E-26 8.8E-31 176.8 14.7 119 164-289 4-122 (123)
61 3utm_A Tankyrase-1; tankyrase, 99.9 9E-26 3.1E-30 202.4 20.5 155 133-293 59-270 (351)
62 3eu9_A Huntingtin-interacting 99.9 6.1E-26 2.1E-30 192.9 18.4 156 133-294 77-234 (240)
63 3v31_A Ankyrin repeat family A 99.9 3.4E-26 1.2E-30 185.0 15.5 125 166-294 2-126 (167)
64 3jxi_A Vanilloid receptor-rela 99.9 1.2E-26 4.1E-31 200.9 13.4 160 133-292 6-207 (260)
65 3kea_A K1L; tropism, ANK repea 99.9 9.4E-27 3.2E-31 205.2 12.4 155 133-294 63-219 (285)
66 3kea_A K1L; tropism, ANK repea 99.9 1.5E-26 5.1E-31 203.9 13.6 152 132-292 31-183 (285)
67 2pnn_A Transient receptor pote 99.9 5.5E-27 1.9E-31 204.7 10.7 161 131-291 12-214 (273)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.5E-26 2.6E-30 183.8 16.2 127 164-294 11-137 (169)
69 1s70_B 130 kDa myosin-binding 99.9 5.2E-26 1.8E-30 200.4 16.2 144 132-277 73-276 (299)
70 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-26 3.9E-31 186.3 10.7 128 162-294 7-135 (156)
71 2fo1_E LIN-12 protein; beta-ba 99.9 4.5E-26 1.5E-30 208.3 15.7 160 131-294 165-370 (373)
72 2vge_A RELA-associated inhibit 99.9 6.7E-28 2.3E-32 206.2 3.0 156 132-293 21-213 (229)
73 4hbd_A KN motif and ankyrin re 99.9 9.7E-27 3.3E-31 204.3 10.1 151 137-291 81-237 (276)
74 3eu9_A Huntingtin-interacting 99.9 3.3E-25 1.1E-29 188.3 18.8 154 134-292 44-199 (240)
75 2fo1_E LIN-12 protein; beta-ba 99.9 1.4E-25 4.9E-30 205.0 16.2 139 146-290 147-299 (373)
76 1ihb_A P18-INK4C(INK6), cyclin 99.9 1E-25 3.4E-30 181.1 13.2 123 166-293 4-126 (162)
77 1awc_B Protein (GA binding pro 99.9 3.4E-25 1.2E-29 176.9 15.8 122 168-294 3-124 (153)
78 3ehr_A Osteoclast-stimulating 99.9 3.1E-26 1.1E-30 194.0 9.8 125 164-292 70-195 (222)
79 3f6q_A Integrin-linked protein 99.9 4.1E-25 1.4E-29 180.9 16.1 126 165-294 3-129 (179)
80 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-24 3.8E-29 195.7 20.4 155 132-291 25-189 (337)
81 1sw6_A Regulatory protein SWI6 99.9 3.7E-26 1.3E-30 205.3 10.6 153 137-294 102-307 (327)
82 4g8k_A 2-5A-dependent ribonucl 99.9 1E-24 3.5E-29 195.9 19.9 156 134-293 127-296 (337)
83 3twr_A Tankyrase-2; ankyrin re 99.9 2.9E-25 9.9E-30 179.2 14.5 127 164-294 5-132 (165)
84 3deo_A Signal recognition part 99.9 1.6E-25 5.3E-30 184.4 12.7 127 164-291 41-180 (183)
85 3v30_A DNA-binding protein rfx 99.9 3.6E-25 1.2E-29 179.8 14.6 124 167-294 2-126 (172)
86 1sw6_A Regulatory protein SWI6 99.9 5.2E-26 1.8E-30 204.4 9.0 146 130-277 129-327 (327)
87 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-25 6.4E-30 198.7 11.6 141 132-278 151-298 (301)
88 3ui2_A Signal recognition part 99.9 3.9E-25 1.3E-29 190.6 12.2 121 166-291 44-181 (244)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 3.3E-24 1.1E-28 167.9 16.4 125 130-256 12-136 (136)
90 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-24 3.7E-29 174.1 13.7 121 167-292 2-123 (156)
91 1d9s_A Cyclin-dependent kinase 99.9 5.5E-25 1.9E-29 172.4 11.1 124 132-258 12-136 (136)
92 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-24 3.9E-29 186.8 11.2 126 164-294 2-127 (239)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.5E-23 5.2E-28 160.6 16.3 123 134-258 4-126 (126)
94 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8E-24 2.7E-28 154.8 12.4 93 166-258 1-93 (93)
95 3jue_A Arfgap with coiled-coil 99.9 1.9E-23 6.5E-28 190.6 15.4 122 166-291 198-322 (368)
96 2b0o_E UPLC1; arfgap, structur 99.9 4E-23 1.4E-27 183.6 16.4 123 166-292 150-281 (301)
97 1dcq_A PYK2-associated protein 99.9 2.9E-23 1E-27 182.5 15.3 125 133-257 131-262 (278)
98 3lvq_E ARF-GAP with SH3 domain 99.9 3.5E-23 1.2E-27 196.1 16.9 138 133-276 133-277 (497)
99 3lvq_E ARF-GAP with SH3 domain 99.9 2.1E-23 7E-28 197.8 15.2 125 166-294 131-264 (497)
100 2l6b_A NR1C; ankyrin, consensu 99.9 4.3E-24 1.5E-28 162.2 7.3 108 163-270 5-112 (115)
101 1dcq_A PYK2-associated protein 99.9 1E-22 3.4E-27 179.1 16.4 125 164-292 127-260 (278)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-22 4.4E-27 148.3 12.6 92 199-294 1-92 (93)
103 3jue_A Arfgap with coiled-coil 99.9 2.9E-22 9.9E-27 182.8 14.5 145 133-277 200-348 (368)
104 3ehr_A Osteoclast-stimulating 99.9 7.3E-23 2.5E-27 173.2 9.7 134 132-267 73-207 (222)
105 3aaa_C Myotrophin, protein V-1 99.9 2.7E-22 9.2E-27 154.1 10.8 110 132-243 7-116 (123)
106 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-22 5.3E-27 158.3 7.1 125 132-258 10-134 (137)
107 2aja_A Ankyrin repeat family p 99.9 1.8E-23 6.1E-28 191.4 -0.0 147 133-291 93-246 (376)
108 3t8k_A Uncharacterized protein 99.9 2.9E-22 1E-26 165.8 6.3 129 133-263 39-184 (186)
109 3deo_A Signal recognition part 99.9 4.4E-21 1.5E-25 157.7 13.0 129 130-278 42-171 (183)
110 3ui2_A Signal recognition part 99.8 3.3E-21 1.1E-25 165.9 11.4 125 130-257 43-184 (244)
111 2zgd_A 3 repeat synthetic anky 99.8 9.4E-21 3.2E-25 142.9 10.8 90 196-289 20-109 (110)
112 2aja_A Ankyrin repeat family p 99.8 4.6E-22 1.6E-26 182.0 2.3 137 142-292 76-221 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-20 4.8E-25 142.6 9.5 96 195-294 4-99 (115)
114 2zgd_A 3 repeat synthetic anky 99.8 4.3E-20 1.5E-24 139.3 10.8 91 162-252 19-109 (110)
115 3hki_C Proteinase-activated re 36.5 10 0.00034 18.7 0.5 13 4-17 2-14 (21)
116 4g26_A Pentatricopeptide repea 30.3 58 0.002 29.9 5.0 103 181-289 91-201 (501)
117 3zrh_A Ubiquitin thioesterase 29.4 1.3E+02 0.0045 27.0 6.7 62 139-221 29-90 (454)
118 3lu9_C Proteinase-activated re 25.7 21 0.00073 18.3 0.6 14 3-17 10-23 (25)
119 2d46_A Calcium channel, voltag 22.1 30 0.001 21.8 0.9 12 4-15 3-14 (61)
120 3zrh_A Ubiquitin thioesterase 20.4 2.6E+02 0.009 25.1 6.9 61 175-254 30-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.7e-35 Score=240.05 Aligned_cols=159 Identities=30% Similarity=0.474 Sum_probs=151.4
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 209 (295)
+.+.+.|+.|+..|+.+.++.||+.|++++.. |..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+.
T Consensus 2 sdlg~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 2 SELGKRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHH
Confidence 45677899999999999999999999998864 8899999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 210 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 210 ~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
.|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+.+|+ .+|+++|
T Consensus 80 ~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~----~~iv~~L 155 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN----EEVVKLL 155 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHH
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC----HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 8999999
Q ss_pred hhcCC
Q 022566 290 KILPV 294 (295)
Q Consensus 290 ~~lp~ 294 (295)
.+..+
T Consensus 156 l~~GA 160 (169)
T 4gpm_A 156 EKQGG 160 (169)
T ss_dssp HTC--
T ss_pred HHCCC
Confidence 88665
No 2
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=4e-31 Score=211.46 Aligned_cols=152 Identities=29% Similarity=0.361 Sum_probs=145.8
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
....|+.|+..++.+.++.|++.|.+.+ .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4568999999999999999999998765 4788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|+
T Consensus 79 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~i~~~L~ 153 (153)
T 1awc_B 79 HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGN----EDLAEILQ 153 (153)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHC
T ss_pred hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC----HHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 89999985
No 3
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.4e-30 Score=211.91 Aligned_cols=156 Identities=36% Similarity=0.552 Sum_probs=149.2
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
.....++.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNA--EDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 345679999999999999999999988775 488899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~ 166 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGN----EDLAEILQ 166 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 99999998
Q ss_pred hc
Q 022566 291 IL 292 (295)
Q Consensus 291 ~l 292 (295)
++
T Consensus 167 ~~ 168 (169)
T 2y1l_E 167 KL 168 (169)
T ss_dssp TC
T ss_pred Hc
Confidence 76
No 4
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.8e-30 Score=209.06 Aligned_cols=157 Identities=24% Similarity=0.363 Sum_probs=147.8
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
....+++.|+..++.+.++.|++.|.+++. .+..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNA--QNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTC--CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccc--cCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 456789999999999999999999888765 48889999999999 999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD-KSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+.+|+ .+++++|
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~----~~~~~~L 156 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR----NEVVSLM 156 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC----HHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC----HHHHHHH
Confidence 999999999999999999999999999999999999999999999998 69999999999999999997 9999999
Q ss_pred hhcCC
Q 022566 290 KILPV 294 (295)
Q Consensus 290 ~~lp~ 294 (295)
.+..+
T Consensus 157 l~~GA 161 (162)
T 1ihb_A 157 QANGA 161 (162)
T ss_dssp HHTC-
T ss_pred HHhCC
Confidence 87654
No 5
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=7.9e-30 Score=206.54 Aligned_cols=152 Identities=25% Similarity=0.303 Sum_probs=145.1
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+++.|+..++.+.++.++..+.+++. .+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQENVINH--TDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred chHHHHHHCCCHHHHHHHHHcCCCcCC--CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 458999999999999999999877665 488999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.+
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~~ 156 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY----RSVQQVIES 156 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999997 899998864
No 6
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=9.8e-30 Score=203.57 Aligned_cols=152 Identities=25% Similarity=0.355 Sum_probs=143.6
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+++.|+..++.+.++.++.. ...+....+..|+||||+ +..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 5679999999999999999998 534455568899999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+ .+++++|.+
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA----QDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC----HHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 9999999999999999999997 899999875
No 7
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=7.7e-30 Score=207.62 Aligned_cols=152 Identities=24% Similarity=0.318 Sum_probs=144.2
Q ss_pred HHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHH
Q 022566 135 DLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQ 214 (295)
Q Consensus 135 ~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~ 214 (295)
+++.|+..++.+.++.++..+... +...+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 5 SIHQLAAQGELDQLKEHLRKGDNL-VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CHHHHHHTTCHHHHHHHHTTCSGG-GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCccc-ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 588999999999999999987652 3445889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 215 SVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 215 ~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~~~~L~~ 156 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY----RKVQQVIEN 156 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999997 899999865
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=6e-30 Score=206.87 Aligned_cols=158 Identities=31% Similarity=0.412 Sum_probs=145.6
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 209 (295)
......++.|+..++.+.++.++..+. .+....+..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+.
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 345678999999999999999998643 4455568889999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 210 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 210 ~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+. |+ .+|+++|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~----~~i~~~L 159 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GD----TDIQDLL 159 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TC----HHHHHHH
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CC----hHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999877 65 7999999
Q ss_pred hhcC
Q 022566 290 KILP 293 (295)
Q Consensus 290 ~~lp 293 (295)
+.-.
T Consensus 160 ~~~g 163 (165)
T 3twr_A 160 RGDA 163 (165)
T ss_dssp HTC-
T ss_pred hhcc
Confidence 8754
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=8.9e-30 Score=211.03 Aligned_cols=155 Identities=23% Similarity=0.260 Sum_probs=147.6
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+|+.|+..+..+.++.|+..+++++. .+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLED--KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccc--ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 34579999999999999999999987765 4888999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~ 188 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR----QEVIKIFTE 188 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC----HHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc----HHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999976
Q ss_pred c
Q 022566 292 L 292 (295)
Q Consensus 292 l 292 (295)
.
T Consensus 189 ~ 189 (192)
T 2rfm_A 189 V 189 (192)
T ss_dssp H
T ss_pred c
Confidence 4
No 10
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.6e-29 Score=207.38 Aligned_cols=156 Identities=24% Similarity=0.280 Sum_probs=145.7
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCC-CCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~-~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
..+++.|+..++.+.++.++..+. +++ ..+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLN--QGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCccccc--ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 456899999999999999999843 344 45889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++ .+++++|.+
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~~~~~L~~ 159 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR----ELLRERAEK 159 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHH----HHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHH----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 899999987
Q ss_pred cCC
Q 022566 292 LPV 294 (295)
Q Consensus 292 lp~ 294 (295)
..+
T Consensus 160 ~g~ 162 (179)
T 3f6q_A 160 MGQ 162 (179)
T ss_dssp TTC
T ss_pred hhc
Confidence 654
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.7e-30 Score=223.50 Aligned_cols=154 Identities=24% Similarity=0.304 Sum_probs=143.0
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+|+.|+..+..+.++.|+..+++++.. +..|.||+|+|+..++.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~--~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGAR--NADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCcc--CCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 345799999999999999999999988764 788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|+++|.++..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.++ +|+++|+.
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~------~i~~lL~~ 237 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNS------KIMELLQV 237 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC------HHHHHTTC
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC------cHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998876 46777766
Q ss_pred cC
Q 022566 292 LP 293 (295)
Q Consensus 292 lp 293 (295)
++
T Consensus 238 l~ 239 (269)
T 4b93_B 238 VP 239 (269)
T ss_dssp --
T ss_pred HH
Confidence 54
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.4e-28 Score=212.77 Aligned_cols=157 Identities=20% Similarity=0.216 Sum_probs=141.3
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCC-CCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~-~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
...+|+.|+..+..+.++.|+..+. +++. .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 90 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 90 GRTPLHAAVSADAQGVFQILIRNRATDLDA--RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHSTTSCTTC--CCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCccc--cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3467888999999999999998876 4443 478899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+|+++|+
T Consensus 168 ~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~----~~i~~~l~ 243 (253)
T 1yyh_A 168 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH----HDIVRLLD 243 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 89999998
Q ss_pred hcCC
Q 022566 291 ILPV 294 (295)
Q Consensus 291 ~lp~ 294 (295)
..++
T Consensus 244 ~~~~ 247 (253)
T 1yyh_A 244 LEHH 247 (253)
T ss_dssp C---
T ss_pred HHhh
Confidence 7654
No 13
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=2.5e-29 Score=197.30 Aligned_cols=132 Identities=23% Similarity=0.273 Sum_probs=125.3
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCC-CChH
Q 022566 158 PNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNE-GWTP 236 (295)
Q Consensus 158 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~-g~Tp 236 (295)
+++...+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+. |+.+++++|+++|++++.+|.. |+||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3445568899999999999999999999999999999999999999999999 9999999999999999999999 9999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 237 LHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+..+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH----RDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC----HHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999997 999999987544
No 14
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=4.2e-28 Score=205.46 Aligned_cols=157 Identities=23% Similarity=0.239 Sum_probs=141.2
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCccc-CCCCCChHHHHHHHcCCHHHHHHHHhCC--CCCCccCCCCChHHHHHHH
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGK-ISTAKWRPLQTLTLSMQIRYMDMLLDGG--LDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~-~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~d~~~~d~~g~tpLh~A~~ 209 (295)
..+++.|+..+..+.++.|+..+++++... .+..|+||||+|+..|+.+++++|+++| ++++..+..|.||||+|+.
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~ 116 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG 116 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHH
Confidence 457888999999999999999997777766 7888999999999999999999999988 8888889999999999999
Q ss_pred hCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHhcCCCCChHHHHHH
Q 022566 210 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING-ADKSRKTKDGKTALDMSLCYGRDFKSYDLAKL 288 (295)
Q Consensus 210 ~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~ 288 (295)
.|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..|+ .+++++
T Consensus 117 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~----~~~v~~ 192 (228)
T 2dzn_A 117 KKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH----GDAAVL 192 (228)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC----HHHHHH
T ss_pred cCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC----HHHHHH
Confidence 99999999999999999999999999999999999999999999999 8999999999999999999997 899998
Q ss_pred hh-hcC
Q 022566 289 LK-ILP 293 (295)
Q Consensus 289 L~-~lp 293 (295)
|. ..+
T Consensus 193 Ll~~~g 198 (228)
T 2dzn_A 193 LVEKYG 198 (228)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 87 544
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=2.4e-28 Score=207.85 Aligned_cols=155 Identities=21% Similarity=0.215 Sum_probs=142.5
Q ss_pred cHHHHHHHHhcChHHHHHHHhc-CCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCC-----CccCCCCChHHHH
Q 022566 133 EEDLLKEVEQLLEPEEREILNQ-NATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI-----DSVDKDGATPLHY 206 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~-g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~-----~~~d~~g~tpLh~ 206 (295)
..+|+.|+..++.+.++.|+.. |.+++. .+..|+||||+|+..|+.+++++|++.|+++ +..+..|.||||+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQ--RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCccc--CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 4578999999999999999998 877765 4889999999999999999999999999887 6677899999999
Q ss_pred HHHhCCHHHHHHHHhCCCCCcccCC-------------CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 022566 207 AVQVGAMQSVKLLIKYNVDVNVADN-------------EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMS 273 (295)
Q Consensus 207 A~~~g~~~~v~~Ll~~ga~in~~d~-------------~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A 273 (295)
|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998765 799999999999999999999999999999999999999999
Q ss_pred HhcCCCCChHHHH----HHhhhcC
Q 022566 274 LCYGRDFKSYDLA----KLLKILP 293 (295)
Q Consensus 274 ~~~g~~~~~~~iv----~~L~~lp 293 (295)
+..|+ .+++ ++|....
T Consensus 162 ~~~~~----~~~~~~i~~~Ll~~g 181 (232)
T 2rfa_A 162 ILQPN----KTFACQMYNLLLSYD 181 (232)
T ss_dssp HTCSC----HHHHHHHHHHHHHTT
T ss_pred HHcCC----hHHHHHHHHHHHhcC
Confidence 99998 6666 8887654
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=5.2e-28 Score=205.47 Aligned_cols=153 Identities=22% Similarity=0.275 Sum_probs=96.0
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 42 t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 119 (231)
T 3aji_A 42 TALHWACSAGHTEIVEFLLQLGVPVND--KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCcHHHHHHHHHhCCCCCC--cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 345666666666666666666555443 355566666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+.
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ 194 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER----VEEAKFLVTQ 194 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC----HHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC----HHHHHHHHHC
Confidence 66666666666666666666666666666666666666666666666666666666666666665 5666666544
No 17
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=7.3e-28 Score=212.35 Aligned_cols=157 Identities=22% Similarity=0.301 Sum_probs=145.0
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
....++.|+..++.+.++.|+..|++++. .+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINY--ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTC--BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 45679999999999999999999988776 4888999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCC------------------------------------------------------------
Q 022566 212 AMQSVKLLIKYNVDVNVADN------------------------------------------------------------ 231 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~------------------------------------------------------------ 231 (295)
+.+++++|+++|++++..+.
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 118 YLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 99999999999998876553
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 232 EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 232 ~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+ .+++++|.+...
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll~~ga 256 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK----EEACRILVENLC 256 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCC----HHHHHHHHHcCC
Confidence 47788999999999999999999999999999999999999999997 899999987653
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=2.1e-28 Score=213.52 Aligned_cols=156 Identities=24% Similarity=0.275 Sum_probs=143.4
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC--------------------
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLD-------------------- 192 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d-------------------- 192 (295)
..+|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++|++
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAGVLVA--ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcch
Confidence 46789999999999999999999888764 78899999999999999999999998765
Q ss_pred ---------------------------CCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCC-CChHHHHHHHcC
Q 022566 193 ---------------------------IDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNE-GWTPLHIAIQSR 244 (295)
Q Consensus 193 ---------------------------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~-g~TpLh~A~~~g 244 (295)
++..+..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 203 (282)
T 1oy3_D 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203 (282)
T ss_dssp --------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred hcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC
Confidence 6677889999999999999999999999999999999864 999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 245 NRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 245 ~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
+.+++++|+++|++++.+|..|.||||+|+..|+ .+|+++|.+..+
T Consensus 204 ~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll~~ga 249 (282)
T 1oy3_D 204 AASVLELLLKAGADPTARMYGGRTPLGSALLRPN----PILARLLRAHGA 249 (282)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC----HHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC----cHHHHHHHHcCC
Confidence 9999999999999999999999999999999997 899999987654
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=3.3e-28 Score=210.40 Aligned_cols=157 Identities=27% Similarity=0.314 Sum_probs=148.9
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-d~~~~d~~g~tpLh~A~~~ 210 (295)
...+|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|++.|. +++..+..|.||||+|+..
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 134 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Confidence 346799999999999999999999988764 8899999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~----~~~v~~Ll 210 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS----YETAKVLL 210 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCC----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 89999998
Q ss_pred hcCC
Q 022566 291 ILPV 294 (295)
Q Consensus 291 ~lp~ 294 (295)
+..+
T Consensus 211 ~~ga 214 (253)
T 1yyh_A 211 DHFA 214 (253)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 7653
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=216.25 Aligned_cols=155 Identities=25% Similarity=0.288 Sum_probs=130.0
Q ss_pred HHHHHHHHhcCh-HHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 134 EDLLKEVEQLLE-PEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 134 ~~l~~ai~~~~~-~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
.+++.++..+.. ..+..|+..|+++|.. +..|+||||+|+..|+.+++++|++.|++++..+..|.||+|+|+..++
T Consensus 54 t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~--d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~ 131 (269)
T 4b93_B 54 HPLCQCPKCAPAQKRLAKVPASGLGVNVT--SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH 131 (269)
T ss_dssp ---------------------CCCCTTCC--CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHhCCHHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccCh
Confidence 345555554443 4677888999988764 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .+++++|.+.
T Consensus 132 ~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~ 207 (269)
T 4b93_B 132 FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH----VFVVELLLLH 207 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC----HHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC----HHHHHHHHHC
Confidence 999999999999999999999999999999999999999999999999999999999999999997 9999999876
Q ss_pred CC
Q 022566 293 PV 294 (295)
Q Consensus 293 p~ 294 (295)
.+
T Consensus 208 Ga 209 (269)
T 4b93_B 208 GA 209 (269)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 21
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=8.6e-28 Score=203.05 Aligned_cols=156 Identities=20% Similarity=0.228 Sum_probs=143.9
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCC-CCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~-~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
..+++.|+..+..+.++.|+..+. +++. .+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDA--RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence 457889999999999999998876 4443 4788999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+|+++|.+
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~i~~~L~~ 212 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH----HDIVRLLDE 212 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc----hHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999987
Q ss_pred cCC
Q 022566 292 LPV 294 (295)
Q Consensus 292 lp~ 294 (295)
...
T Consensus 213 ~g~ 215 (223)
T 2f8y_A 213 YNL 215 (223)
T ss_dssp TTC
T ss_pred cCC
Confidence 653
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=5.9e-28 Score=200.84 Aligned_cols=154 Identities=25% Similarity=0.347 Sum_probs=144.0
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHH-hCCCCCCccCCCCChHHHHHHHhC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLL-DGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll-~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
..+++.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..|
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 117 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRGADINLQ--NSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG 117 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC
Confidence 34789999999999999999999988764 888999999999999999999999 678899999999999999999999
Q ss_pred CHHHHHHHHhCC-CCCcccCCCCChHHHHHHHcCC-----HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHH
Q 022566 212 AMQSVKLLIKYN-VDVNVADNEGWTPLHIAIQSRN-----RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDL 285 (295)
Q Consensus 212 ~~~~v~~Ll~~g-a~in~~d~~g~TpLh~A~~~g~-----~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~i 285 (295)
+.+++++|+++| ++++.++..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..|+ .++
T Consensus 118 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~ 193 (201)
T 3hra_A 118 HIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY----TEI 193 (201)
T ss_dssp CHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHH
T ss_pred CHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC----HhH
Confidence 999999999998 9999999999999999999998 999999999999999999999999999999997 899
Q ss_pred HHHhhhc
Q 022566 286 AKLLKIL 292 (295)
Q Consensus 286 v~~L~~l 292 (295)
+++|.+.
T Consensus 194 ~~~Ll~~ 200 (201)
T 3hra_A 194 SKILAQY 200 (201)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9999865
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=1.1e-27 Score=202.38 Aligned_cols=157 Identities=27% Similarity=0.312 Sum_probs=148.3
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-d~~~~d~~g~tpLh~A~~~ 210 (295)
...+++.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANI--QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 35679999999999999999999988876 48899999999999999999999999887 8999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll 178 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS----YETAKVLL 178 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC----HHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC----HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 89999998
Q ss_pred hcCC
Q 022566 291 ILPV 294 (295)
Q Consensus 291 ~lp~ 294 (295)
+..+
T Consensus 179 ~~ga 182 (223)
T 2f8y_A 179 DHFA 182 (223)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 7643
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=4.4e-28 Score=211.43 Aligned_cols=159 Identities=21% Similarity=0.265 Sum_probs=146.6
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCC-cccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPN-LGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~-~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
-..+|+.|+..+..+.++.|+..+++++ +...+..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 88 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRV 88 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3457999999999999999999998854 455688999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCC-----------------------------------------------CcccCCCCChHHHHHHHc
Q 022566 211 GAMQSVKLLIKYNVD-----------------------------------------------VNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~-----------------------------------------------in~~d~~g~TpLh~A~~~ 243 (295)
|+.+++++|+++|++ ++.++..|+||||+|+..
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 168 (282)
T 1oy3_D 89 RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIH 168 (282)
T ss_dssp TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHT
T ss_pred CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHc
Confidence 999999999998765 677889999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 244 RNRDIAKVLLINGADKSRKTKD-GKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~-g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
|+.+++++|+++|++++.++.. |.||||+|+..|+ .+++++|....+
T Consensus 169 g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~----~~~v~~Ll~~ga 216 (282)
T 1oy3_D 169 KDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQA----ASVLELLLKAGA 216 (282)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 9999999999999999999865 9999999999997 999999987643
No 25
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=3e-29 Score=208.06 Aligned_cols=152 Identities=16% Similarity=0.087 Sum_probs=136.4
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCH----HHHHHHHhCCCCCCccCCCCChHHHHHHH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQI----RYMDMLLDGGLDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 209 (295)
..++.|+..++.+.++.++..+.+. . .+..|+||||+|+..|+. +++++|+++|++++.+|..|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~--~-~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYED--K-ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSC--H-HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCccc--c-cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 4689999999999999999876432 1 136799999999999975 59999999999999999999999999999
Q ss_pred hCC------HHHHHHHHhCCCCCcccCCCCC-hHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhc
Q 022566 210 VGA------MQSVKLLIKYNVDVNVADNEGW-TPLHIAIQSR-----NRDIAKVLLI-NGADKSRKTKDGKTALDMSLCY 276 (295)
Q Consensus 210 ~g~------~~~v~~Ll~~ga~in~~d~~g~-TpLh~A~~~g-----~~~iv~~Ll~-~gad~~~~d~~g~TpL~~A~~~ 276 (295)
.++ .+++++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|.||||+|+..
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 987 6889999999999999999999 9999999944 4579999999 9999999999999999999999
Q ss_pred CCCCChHHHHHHhhhc
Q 022566 277 GRDFKSYDLAKLLKIL 292 (295)
Q Consensus 277 g~~~~~~~iv~~L~~l 292 (295)
|+ .+++++|..+
T Consensus 165 ~~----~~~v~~L~~~ 176 (186)
T 3t8k_A 165 QK----PIALKMMEDY 176 (186)
T ss_dssp TC----HHHHHHHHHH
T ss_pred CC----HHHHHHHHHH
Confidence 98 8999988653
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=8.1e-28 Score=204.61 Aligned_cols=156 Identities=21% Similarity=0.223 Sum_probs=143.9
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCc---ccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCC-----------
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNL---GKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDK----------- 198 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~---~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~----------- 198 (295)
..+|+.|+..+..+.++.|++.++++.. ...+..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~ 117 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNL 117 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccccc
Confidence 4579999999999999999999987532 34577899999999999999999999999999998765
Q ss_pred --CCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHH----HHHHHcCCCC------CCCCCCC
Q 022566 199 --DGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIA----KVLLINGADK------SRKTKDG 266 (295)
Q Consensus 199 --~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv----~~Ll~~gad~------~~~d~~g 266 (295)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|
T Consensus 118 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g 197 (232)
T 2rfa_A 118 IYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQG 197 (232)
T ss_dssp CCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTS
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCC
Confidence 799999999999999999999999999999999999999999999999988 9999999998 5899999
Q ss_pred CCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 267 KTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 267 ~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.||||+|+..|+ .+++++|.+.
T Consensus 198 ~tpl~~A~~~g~----~~~v~~Ll~~ 219 (232)
T 2rfa_A 198 LTPFKLAGVEGN----IVMFQHLMQK 219 (232)
T ss_dssp CCHHHHHHHHTC----HHHHHHHHHH
T ss_pred CCHHHHHHHcCC----HHHHHHHHhc
Confidence 999999999997 9999999653
No 27
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.7e-28 Score=212.15 Aligned_cols=157 Identities=17% Similarity=0.186 Sum_probs=144.5
Q ss_pred hcHHHHHHHHh---cChHHHHHHHhcCCCCCcc---------cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCC
Q 022566 132 YEEDLLKEVEQ---LLEPEEREILNQNATPNLG---------KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKD 199 (295)
Q Consensus 132 ~~~~l~~ai~~---~~~~~~~~lL~~g~~~~~~---------~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~ 199 (295)
...+|+.|+.. +..+.++.|++.|++++.. ..+..|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 122 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACG 122 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccc
Confidence 34578999998 9999999999998876522 24577999999999999999999999999999999886
Q ss_pred -------------CChHHHHHHHhCCHHHHHHHHh---CCCCCcccCCCCChHHHHHHH--cCCHH-------HHHHHHH
Q 022566 200 -------------GATPLHYAVQVGAMQSVKLLIK---YNVDVNVADNEGWTPLHIAIQ--SRNRD-------IAKVLLI 254 (295)
Q Consensus 200 -------------g~tpLh~A~~~g~~~~v~~Ll~---~ga~in~~d~~g~TpLh~A~~--~g~~~-------iv~~Ll~ 254 (295)
|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|++
T Consensus 123 ~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 123 RFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp GGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999 88888 9999999
Q ss_pred cCCCC-------CCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 255 NGADK-------SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 255 ~gad~-------~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
+|+++ +.+|..|.||||+|+..|+ .+++++|.+.
T Consensus 203 ~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~ 243 (256)
T 2etb_A 203 MGARLCPTVQLEEISNHQGLTPLKLAAKEGK----IEIFRHILQR 243 (256)
T ss_dssp HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC----HHHHHHHHHH
T ss_pred cCCCcccccccccccCCCCCCHHHHHHHhCC----HHHHHHHHhC
Confidence 99999 9999999999999999997 9999999753
No 28
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=5.2e-28 Score=189.71 Aligned_cols=125 Identities=37% Similarity=0.503 Sum_probs=120.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
...+.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 244 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.++
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~----~~~~~~Ll~~ 135 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN----EDLAEILQKL 135 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCC----HHHHHHHHHc
Confidence 99999999999999999999999999999999997 9999999875
No 29
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=2.4e-28 Score=208.77 Aligned_cols=157 Identities=24% Similarity=0.289 Sum_probs=146.5
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCC------CCccCCCCChHHH
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLD------IDSVDKDGATPLH 205 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d------~~~~d~~g~tpLh 205 (295)
...+|+.|+..+..+.++.|+..|++++. .+..|+||||+|+..|+.+++++|++.|++ ++..+..|.||||
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPEL--RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSCC--CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 34679999999999999999999988876 488999999999999999999999999876 5667888999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCCcccCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHH
Q 022566 206 YAVQVGAMQSVKLLIKYNVDVNVADN-EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYD 284 (295)
Q Consensus 206 ~A~~~g~~~~v~~Ll~~ga~in~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~ 284 (295)
+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~ 198 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS----TR 198 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC----HH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc----hH
Confidence 99999999999999999999999998 99999999999999999999999999999999999999999999997 99
Q ss_pred HHHHhhhcCC
Q 022566 285 LAKLLKILPV 294 (295)
Q Consensus 285 iv~~L~~lp~ 294 (295)
++++|.+..+
T Consensus 199 ~~~~Ll~~ga 208 (236)
T 1ikn_D 199 IQQQLGQLTL 208 (236)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHcch
Confidence 9999987654
No 30
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=206.71 Aligned_cols=154 Identities=24% Similarity=0.239 Sum_probs=95.3
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQVNGV--TADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRG 112 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 344566666666666666666666555432 55566666666666666666666666666553 333666666666666
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+ .+++++|.+
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~----~~~v~~Ll~ 187 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTAS----EELACLLMD 187 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTC----HHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCC----HHHHHHHHH
Confidence 66666666666666666666666666666666666666666666666663 5566666666666665 666666655
Q ss_pred cC
Q 022566 292 LP 293 (295)
Q Consensus 292 lp 293 (295)
.+
T Consensus 188 ~g 189 (261)
T 2xai_A 188 FG 189 (261)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=1.9e-27 Score=197.81 Aligned_cols=160 Identities=24% Similarity=0.237 Sum_probs=146.0
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCC-CCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~-~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
..+++.|+..++.+.++.++..+. +++. .+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDE--VDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 457999999999999999998876 5554 5889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-hCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHhcCCC-CChHHHHHH
Q 022566 212 AMQSVKLLI-KYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING-ADKSRKTKDGKTALDMSLCYGRD-FKSYDLAKL 288 (295)
Q Consensus 212 ~~~~v~~Ll-~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~TpL~~A~~~g~~-~~~~~iv~~ 288 (295)
+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..+.. ....+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999 568899999999999999999999999999999999 99999999999999999998852 123799999
Q ss_pred hhhcCC
Q 022566 289 LKILPV 294 (295)
Q Consensus 289 L~~lp~ 294 (295)
|.+..+
T Consensus 164 Ll~~ga 169 (201)
T 3hra_A 164 LMENGA 169 (201)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 987643
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=9.6e-28 Score=195.93 Aligned_cols=122 Identities=34% Similarity=0.513 Sum_probs=118.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHH
Q 022566 169 RPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDI 248 (295)
Q Consensus 169 t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~i 248 (295)
++|+.||..|+.++|++|++.|+++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 249 AKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 249 v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
+++|+++|++++.+|..|+||||+|+..|+ .+++++|.+..+
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~----~~~v~~Ll~~ga 127 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGH----KEVVKLLISKGA 127 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999999999999997 999999987654
No 33
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.6e-28 Score=212.67 Aligned_cols=155 Identities=19% Similarity=0.206 Sum_probs=141.2
Q ss_pred cHHHHHHH---HhcChHHHHHHHhcCCC---------CCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccC---
Q 022566 133 EEDLLKEV---EQLLEPEEREILNQNAT---------PNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD--- 197 (295)
Q Consensus 133 ~~~l~~ai---~~~~~~~~~~lL~~g~~---------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d--- 197 (295)
..+|+.|+ ..+..+.++.|+..|++ .+....+..|+||||+|+..|+.++|++|+++|++++..+
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 126 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc
Confidence 45678887 67889999999998754 3344556689999999999999999999999999999998
Q ss_pred -----------CCCChHHHHHHHhCCHHHHHHHHh---CCCCCcccCCCCChHHHHHHHcCC---------HHHHHHHHH
Q 022566 198 -----------KDGATPLHYAVQVGAMQSVKLLIK---YNVDVNVADNEGWTPLHIAIQSRN---------RDIAKVLLI 254 (295)
Q Consensus 198 -----------~~g~tpLh~A~~~g~~~~v~~Ll~---~ga~in~~d~~g~TpLh~A~~~g~---------~~iv~~Ll~ 254 (295)
..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|++
T Consensus 127 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~ 206 (260)
T 3jxi_A 127 FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI 206 (260)
T ss_dssp CCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence 689999999999999999999999 999999999999999999999888 799999999
Q ss_pred cCCCC-------CCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 255 NGADK-------SRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 255 ~gad~-------~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+|+++ +.+|..|.||||+|+..|+ .+++++|.+
T Consensus 207 ~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~ 246 (260)
T 3jxi_A 207 KCAKLFPDTNLEALLNNDGLSPLMMAAKTGK----IGIFQHIIR 246 (260)
T ss_dssp HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC----HHHHHHHHH
T ss_pred hCcccccccchhhcccCCCCCHHHHHHHcCC----HHHHHHHHH
Confidence 99998 6799999999999999998 999999965
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=2.5e-27 Score=201.29 Aligned_cols=157 Identities=22% Similarity=0.280 Sum_probs=147.1
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+++.|+..++.+.++.++..+... ....+..|+||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 34699999999999999999887653 34568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .+++++|...
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ 161 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN----LKMVHILLFY 161 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC----HHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999997 9999999876
Q ss_pred CC
Q 022566 293 PV 294 (295)
Q Consensus 293 p~ 294 (295)
+.
T Consensus 162 g~ 163 (231)
T 3aji_A 162 KA 163 (231)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=6.4e-27 Score=199.50 Aligned_cols=145 Identities=22% Similarity=0.304 Sum_probs=108.7
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcC-CCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQN-ATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g-~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
...+++.|+..+..+.++.|+..+ .+++. .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 154 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNC--QDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS 154 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCccc--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC
Confidence 345677777777777777777766 44443 366677777777777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 278 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 278 (295)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 155 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 155 GCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777776
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=5.6e-27 Score=200.02 Aligned_cols=151 Identities=24% Similarity=0.314 Sum_probs=75.4
Q ss_pred HHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCC----CCCccCCCCChHHHHHHHh
Q 022566 135 DLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL----DIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 135 ~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----d~~~~d~~g~tpLh~A~~~ 210 (295)
+++.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..
T Consensus 49 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~ 126 (241)
T 1k1a_A 49 PLHLAVITTLPSVVRLLVTAGASPMAL--DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 126 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHc
Confidence 344455555555555555544444332 4444555555555555555555555443 4444444455555555555
Q ss_pred CCHHHHHHHHhCCCCCcccC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 211 GAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d-~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|
T Consensus 127 ~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~L 202 (241)
T 1k1a_A 127 ECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL----LPLVRTL 202 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC----HHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHH
Confidence 55555555555555555444 445555555555555555555555555555555555555555555544 4555544
Q ss_pred hh
Q 022566 290 KI 291 (295)
Q Consensus 290 ~~ 291 (295)
.+
T Consensus 203 l~ 204 (241)
T 1k1a_A 203 VR 204 (241)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 37
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=209.70 Aligned_cols=155 Identities=27% Similarity=0.314 Sum_probs=145.5
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCC-CCCcccCCCCCChHHHHHH-----HcCCHHHHHHHHhCCCCCCccCCCCChHHH
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNA-TPNLGKISTAKWRPLQTLT-----LSMQIRYMDMLLDGGLDIDSVDKDGATPLH 205 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~-~~~~~~~d~~g~t~Lh~A~-----~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh 205 (295)
...+|+.|+..+..+.++.|++.|+ +++. .+..|+||||+|+ ..++.+++++|++.|.+++..+..|+||||
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKVDK--QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALM 188 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCCC--CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 3467999999999999999999997 6655 5889999999999 668899999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcCCCCChHH
Q 022566 206 YAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLI-NGADKSRKTKDGKTALDMSLCYGRDFKSYD 284 (295)
Q Consensus 206 ~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~~~~~ 284 (295)
+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..|+ .+
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~----~~ 264 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ----SE 264 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC----HH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC----HH
Confidence 9999999999999999999999999999999999999999999999999 899999999999999999999997 99
Q ss_pred HHHHhhhc
Q 022566 285 LAKLLKIL 292 (295)
Q Consensus 285 iv~~L~~l 292 (295)
++++|.+-
T Consensus 265 iv~~Ll~~ 272 (276)
T 4hbd_A 265 IASMLYSR 272 (276)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999754
No 38
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=7.9e-28 Score=210.07 Aligned_cols=158 Identities=18% Similarity=0.233 Sum_probs=142.8
Q ss_pred hcHHHHHHHHh---cChHHHHHHHhcCCCC---------CcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCC-
Q 022566 132 YEEDLLKEVEQ---LLEPEEREILNQNATP---------NLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDK- 198 (295)
Q Consensus 132 ~~~~l~~ai~~---~~~~~~~~lL~~g~~~---------~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~- 198 (295)
...+|+.|+.. +..+.++.|+..|+++ .....+..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 54 g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 133 (273)
T 2pnn_A 54 GKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANG 133 (273)
T ss_dssp CCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCS
T ss_pred CCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccc
Confidence 34578888875 8999999999988643 2233567899999999999999999999999999999987
Q ss_pred -------------CCChHHHHHHHhCCHHHHHHHHh---CCCCCcccCCCCChHHHHHHHcCC---------HHHHHHHH
Q 022566 199 -------------DGATPLHYAVQVGAMQSVKLLIK---YNVDVNVADNEGWTPLHIAIQSRN---------RDIAKVLL 253 (295)
Q Consensus 199 -------------~g~tpLh~A~~~g~~~~v~~Ll~---~ga~in~~d~~g~TpLh~A~~~g~---------~~iv~~Ll 253 (295)
.|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+
T Consensus 134 ~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll 213 (273)
T 2pnn_A 134 DFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213 (273)
T ss_dssp GGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH
Confidence 79999999999999999999999 999999999999999999999998 89999999
Q ss_pred HcCCCCC-------CCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 254 INGADKS-------RKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 254 ~~gad~~-------~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
++|++++ .+|..|.||||+|+..|+ .+|+++|.+..
T Consensus 214 ~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~g 256 (273)
T 2pnn_A 214 ILGAKLHPTLKLEEITNRKGLTPLALAASSGK----IGVLAYILQRE 256 (273)
T ss_dssp HHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC----HHHHHHHHHHH
T ss_pred HhhhhcccccccccccCCCCCCHHHHHHHhCh----HHHHHHHHHCC
Confidence 9999997 589999999999999997 99999997653
No 39
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.3e-28 Score=208.98 Aligned_cols=153 Identities=25% Similarity=0.316 Sum_probs=116.7
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+|+.|+..+..+.++.++..|++++. +..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4567888999999999999999999885 4678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHH--HhcCCCCChHHHHHHh
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGK-TALDMS--LCYGRDFKSYDLAKLL 289 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~-TpL~~A--~~~g~~~~~~~iv~~L 289 (295)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+ .+++++|
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~----~~~~~~L 158 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY----TQCSQFL 158 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTC----CCHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhcc----HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998887 999999 67776 7899998
Q ss_pred hhc
Q 022566 290 KIL 292 (295)
Q Consensus 290 ~~l 292 (295)
...
T Consensus 159 l~~ 161 (239)
T 1ycs_B 159 YGV 161 (239)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 40
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=3.1e-27 Score=181.38 Aligned_cols=125 Identities=35% Similarity=0.580 Sum_probs=121.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
+|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 246 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 246 ~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.+..+
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH----LEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCc----HHHHHHHHHcCC
Confidence 999999999999999999999999999999997 999999987654
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=6.7e-27 Score=206.07 Aligned_cols=151 Identities=25% Similarity=0.268 Sum_probs=77.0
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|++.|++++..+ .|.||||+|+..|+.
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQVNG--VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHV 170 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSC--CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCH
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCH
Confidence 444455555555555555554444433 24444555555555555555555555555444322 245555555555555
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+ .+++++|.+.
T Consensus 171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~----~~~v~~Ll~~ 244 (285)
T 3d9h_A 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTAS----EELACLLMDF 244 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTC----HHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCC----HHHHHHHHHC
Confidence 555555555555555555555555555555555555555555555553 4455555555555554 4555555443
No 42
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1e-26 Score=198.25 Aligned_cols=158 Identities=24% Similarity=0.280 Sum_probs=137.6
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCC-CCCCccCCCCChHHHHHHH
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGG-LDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpLh~A~~ 209 (295)
....+++.|+..+..+.++.|+..|++++.. +..|.||||+|+..|+.+++++|++.| .+++..+..|.||||+|+.
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 120 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGALVDPK--DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC--CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Confidence 3456788888888888888888888877653 777889999999999999999999888 7888888889999999999
Q ss_pred hCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 210 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 210 ~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|
T Consensus 121 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~L 196 (237)
T 3b7b_A 121 YKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR----YDCVVLF 196 (237)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC----HhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 8899988
Q ss_pred hhcCC
Q 022566 290 KILPV 294 (295)
Q Consensus 290 ~~lp~ 294 (295)
.+...
T Consensus 197 l~~ga 201 (237)
T 3b7b_A 197 LSRDS 201 (237)
T ss_dssp HTTTC
T ss_pred HHcCC
Confidence 76543
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=8.4e-27 Score=197.44 Aligned_cols=155 Identities=26% Similarity=0.272 Sum_probs=144.2
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCC--CCCCc-cCCCCChHHHHHHHh
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGG--LDIDS-VDKDGATPLHYAVQV 210 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~d~~~-~d~~g~tpLh~A~~~ 210 (295)
.+|+.|+..+..+.++.|+..+..... ..+..|+||||+|+..|+.+++++|++.| .+++. .+..|.||||+|+..
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLL-QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccccc-cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 478999999999999999999877653 25889999999999999999999999999 66666 788999999999999
Q ss_pred CCHHHHHHHHhCC--CCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHH
Q 022566 211 GAMQSVKLLIKYN--VDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKL 288 (295)
Q Consensus 211 g~~~~v~~Ll~~g--a~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~ 288 (295)
|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .+++++
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~ 158 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS----LKLIEL 158 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC----HHHHHH
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC----HHHHHH
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999997 999999
Q ss_pred hhhcC
Q 022566 289 LKILP 293 (295)
Q Consensus 289 L~~lp 293 (295)
|...+
T Consensus 159 Ll~~g 163 (228)
T 2dzn_A 159 LCGLG 163 (228)
T ss_dssp HHTTT
T ss_pred HHhcC
Confidence 98765
No 44
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=8.1e-27 Score=202.68 Aligned_cols=142 Identities=20% Similarity=0.226 Sum_probs=94.4
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+++.|+..+..+.++.|++.|++++. +..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 69 WHTPLFNACVSGSWDCVNLLLQHGASVQP---ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSSC---SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC
Confidence 34556666666666666666666666553 334666666666666666666666666666666666666666666666
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYG 277 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g 277 (295)
+.+++++|+++|++++. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 146 ~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 146 QRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp CHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC
T ss_pred CHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc
Confidence 66666666666666663 566666666666666666666666666666666666666666666544
No 45
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=3e-28 Score=191.08 Aligned_cols=125 Identities=27% Similarity=0.295 Sum_probs=118.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHH
Q 022566 163 ISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 242 (295)
Q Consensus 163 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 242 (295)
.+..|+||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
.|+.+++++|+++|++++.+|..|.|||++|+..+. .+++++|..
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~----~~~l~~l~~ 130 (137)
T 3c5r_A 86 NGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM----KSLLLLPEK 130 (137)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH----HHHHSCC--
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH----HHHHhhccc
Confidence 999999999999999999999999999999998874 777776654
No 46
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=8.8e-28 Score=192.81 Aligned_cols=135 Identities=23% Similarity=0.308 Sum_probs=59.1
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCCh-HHHHHHHhCC
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGAT-PLHYAVQVGA 212 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~t-pLh~A~~~g~ 212 (295)
.+|+.|+..+..+.++.|+..|++++.. +..|+||||+|+ .|+.+++++|+++|++++.++..|+| |||+|+..|+
T Consensus 14 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~ 90 (156)
T 1bi7_B 14 DWLATAAARGRVEEVRALLEAGANPNAP--NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (156)
T ss_dssp THHHHHHHHTCHHHHHHHHTTTCCTTCC--CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC
Confidence 3444455555555555555444443332 444445555442 44555555555555555555544544 5555555555
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALD 271 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~ 271 (295)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||.+
T Consensus 91 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 91 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 55555555555555555555555555555555555555555555555555554544443
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=6.1e-28 Score=206.18 Aligned_cols=158 Identities=25% Similarity=0.290 Sum_probs=141.4
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCC--CcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHh
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATP--NLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~--~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~ 210 (295)
..+|+.|+..+..+.++.|+..+... ++...+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 88 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQ 88 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34688999999999888888876642 4455688999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCC------CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHhcCCCCChH
Q 022566 211 GAMQSVKLLIKYNVD------VNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTK-DGKTALDMSLCYGRDFKSY 283 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~------in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~-~g~TpL~~A~~~g~~~~~~ 283 (295)
|+.+++++|++.|++ ++..+..|+||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+ .
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~----~ 164 (236)
T 1ikn_D 89 GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN----P 164 (236)
T ss_dssp TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC----H
T ss_pred CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC----H
Confidence 999999999999876 577888999999999999999999999999999999998 99999999999997 9
Q ss_pred HHHHHhhhcCC
Q 022566 284 DLAKLLKILPV 294 (295)
Q Consensus 284 ~iv~~L~~lp~ 294 (295)
+++++|....+
T Consensus 165 ~~v~~Ll~~ga 175 (236)
T 1ikn_D 165 DLVSLLLKCGA 175 (236)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHcCC
Confidence 99999987653
No 48
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=6.4e-27 Score=217.39 Aligned_cols=155 Identities=29% Similarity=0.450 Sum_probs=128.8
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+++.|+..+..+.++.|+..+++++.. +..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNLG--NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCc
Confidence 45677788888888888888877776654 7778888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|+.+
T Consensus 324 ~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~----~~~~~~l~~~ 399 (437)
T 1n11_A 324 IKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY----ISVTDVLKVV 399 (437)
T ss_dssp SHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC----HHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc----HHHHHHHHhc
Confidence 888888888888888888888888888888888888888888888888888888888888888887 7888888655
Q ss_pred C
Q 022566 293 P 293 (295)
Q Consensus 293 p 293 (295)
.
T Consensus 400 ~ 400 (437)
T 1n11_A 400 T 400 (437)
T ss_dssp C
T ss_pred c
Confidence 4
No 49
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=1.6e-26 Score=207.35 Aligned_cols=156 Identities=24% Similarity=0.282 Sum_probs=108.4
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccC---------------
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD--------------- 197 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d--------------- 197 (295)
..+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~ 169 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGACVNA--MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPEL 169 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhh
Confidence 3445555555555555555555555443 24455555555555555555555555555544332
Q ss_pred ---------------------------------------CCCChHHHHHHHh---CCHHHHHHHHhCCCCCcccCCCCCh
Q 022566 198 ---------------------------------------KDGATPLHYAVQV---GAMQSVKLLIKYNVDVNVADNEGWT 235 (295)
Q Consensus 198 ---------------------------------------~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~in~~d~~g~T 235 (295)
..|.||||+|+.. +..+++++|++.|++++.++..|+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 249 (351)
T 3utm_A 170 RERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT 249 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCC
Confidence 2344555555555 3355666666667777778889999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 236 PLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 236 pLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+..+
T Consensus 250 ~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 304 (351)
T 3utm_A 250 PLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH----LQTCRLLLSYGS 304 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999997 899999987654
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=4e-27 Score=203.54 Aligned_cols=155 Identities=20% Similarity=0.156 Sum_probs=136.7
Q ss_pred HHHHHHHHhcChHHH----HHHHhcCCCCCcc--cCCCCCChHHHHHHHc---CCHHHHHHHHhCCCCCCcc--------
Q 022566 134 EDLLKEVEQLLEPEE----REILNQNATPNLG--KISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDIDSV-------- 196 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~----~~lL~~g~~~~~~--~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~d~~~~-------- 196 (295)
.+|+.|+..++.+.+ +.++..|.+++.. ..+..|+||||+|+.. |+.+++++|++.|++++..
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 83 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQC 83 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccc
Confidence 578999999999744 5555678887751 1488999999999999 9999999999998877643
Q ss_pred ---CCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCC-------------CChHHHHHHHcCCHHHHHHHHH---cCC
Q 022566 197 ---DKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNE-------------GWTPLHIAIQSRNRDIAKVLLI---NGA 257 (295)
Q Consensus 197 ---d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~-------------g~TpLh~A~~~g~~~iv~~Ll~---~ga 257 (295)
|..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++ +|+
T Consensus 84 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 84 TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 367999999999999999999999999999999886 9999999999999999999999 999
Q ss_pred CCCCCCCCCCCHHHHHHh--cCCCCChHH-------HHHHhhhc
Q 022566 258 DKSRKTKDGKTALDMSLC--YGRDFKSYD-------LAKLLKIL 292 (295)
Q Consensus 258 d~~~~d~~g~TpL~~A~~--~g~~~~~~~-------iv~~L~~l 292 (295)
+++.+|..|+||||+|+. .++ .+ ++++|.+.
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~----~~~~~~~~~iv~~Ll~~ 203 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNS----PENSALVIHMYDGLLQM 203 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSC----HHHHHHHHHHHHHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCC----chhhHHHHHHHHHHHHc
Confidence 999999999999999999 554 66 89988653
No 51
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=3.6e-26 Score=198.96 Aligned_cols=155 Identities=26% Similarity=0.305 Sum_probs=146.3
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
...++.|+..++.+.++.|++.|++++.. .+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 46789999999999999999999888754 37789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCCHHHHHHhcCCCCCh
Q 022566 213 MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRK----------TKDGKTALDMSLCYGRDFKS 282 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~----------d~~g~TpL~~A~~~g~~~~~ 282 (295)
.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+
T Consensus 85 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---- 160 (285)
T 1wdy_A 85 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH---- 160 (285)
T ss_dssp HHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC----
T ss_pred HHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCC----
Confidence 99999999999999999999999999999999999999999999999988 7889999999999997
Q ss_pred HHHHHHhhhc
Q 022566 283 YDLAKLLKIL 292 (295)
Q Consensus 283 ~~iv~~L~~l 292 (295)
.+++++|...
T Consensus 161 ~~~v~~Ll~~ 170 (285)
T 1wdy_A 161 VEVLKILLDE 170 (285)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 8999999764
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=2.7e-27 Score=215.00 Aligned_cols=159 Identities=17% Similarity=0.126 Sum_probs=146.4
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhc----CCCCCc---------------ccCCCCCChHHHHHHHcC--CHHHHHHHHhC
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQ----NATPNL---------------GKISTAKWRPLQTLTLSM--QIRYMDMLLDG 189 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~----g~~~~~---------------~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~ 189 (295)
....+|+.|+..+..+.++.|+.. +.+++. ...+..|+||||+|+..| +.+++++|+++
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 345689999999999999999988 665543 114778999999999999 99999999999
Q ss_pred CCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCC-----CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 022566 190 GLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVD-----VNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTK 264 (295)
Q Consensus 190 g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-----in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~ 264 (295)
|++++..|..|.||||+|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 265 DGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 265 ~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
.|.||||+|+..|+ .+++++|.+..
T Consensus 243 ~g~tpL~~A~~~g~----~~~v~~Ll~~~ 267 (364)
T 3ljn_A 243 EHTVPLYLSVRAAM----VLLTKELLQKT 267 (364)
T ss_dssp TSCCHHHHHHHTCC----HHHHHHHHHHS
T ss_pred CCCCHHHHHHHhCh----HHHHHHHHHcC
Confidence 99999999999997 99999997653
No 53
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=3.6e-26 Score=194.96 Aligned_cols=157 Identities=20% Similarity=0.296 Sum_probs=145.8
Q ss_pred hcHHHHHHHHhcChHHHHHHHh----cCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHH
Q 022566 132 YEEDLLKEVEQLLEPEEREILN----QNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYA 207 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~----~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A 207 (295)
-..+|+.|+..++.+.++.|++ .+.+++. .+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI--YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 86 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCc--ccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 3567999999999999999997 5666655 488899999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHhCCC----CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCCCCh
Q 022566 208 VQVGAMQSVKLLIKYNV----DVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKT-KDGKTALDMSLCYGRDFKS 282 (295)
Q Consensus 208 ~~~g~~~~v~~Ll~~ga----~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~TpL~~A~~~g~~~~~ 282 (295)
+..|+.+++++|++.|+ +++..+..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~---- 162 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS---- 162 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC----
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC----
Confidence 99999999999999987 889999999999999999999999999999999999999 889999999999997
Q ss_pred HHHHHHhhhcCC
Q 022566 283 YDLAKLLKILPV 294 (295)
Q Consensus 283 ~~iv~~L~~lp~ 294 (295)
.+++++|.+...
T Consensus 163 ~~~v~~Ll~~g~ 174 (241)
T 1k1a_A 163 LSMVQLLLQHGA 174 (241)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999987543
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=8.2e-27 Score=211.81 Aligned_cols=156 Identities=18% Similarity=0.214 Sum_probs=123.1
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCc----------------
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDS---------------- 195 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~---------------- 195 (295)
-..+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|++.|++++.
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~ 97 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTI--QNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKT 97 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCH
Confidence 34567777777777777777777766654 366677777777777777777777777665544
Q ss_pred ------------------------------------cCCCCChHHHHHHHhC--CHHHHHHHHhCCCCCcccCCCCChHH
Q 022566 196 ------------------------------------VDKDGATPLHYAVQVG--AMQSVKLLIKYNVDVNVADNEGWTPL 237 (295)
Q Consensus 196 ------------------------------------~d~~g~tpLh~A~~~g--~~~~v~~Ll~~ga~in~~d~~g~TpL 237 (295)
.+..|.||||+|+..| +.+++++|+++|++++.+|..|+|||
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 177 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPL 177 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 5667888888888888 88888888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 238 HIAIQSRNRDIAKVLLINGAD-----KSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 238 h~A~~~g~~~iv~~Ll~~gad-----~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+ .+++++|.+..
T Consensus 178 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g 234 (364)
T 3ljn_A 178 MRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW----EDVAMRFVEMG 234 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC----HHHHHHHHTTT
T ss_pred HHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC----HHHHHHHHHcC
Confidence 888888888888888888888 88888888888888888887 88888887654
No 55
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=3.9e-26 Score=201.15 Aligned_cols=153 Identities=20% Similarity=0.241 Sum_probs=114.6
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+|+.|+..+..+.++.|+..|++++. .+..|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~ 138 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAVNI--ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 138 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCE--ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHH
Confidence 457777777777777777777766654 366777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+..
T Consensus 139 ~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~----~~~v~~Ll~~g 213 (285)
T 3d9h_A 139 DCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ----RACVKKLLESG 213 (285)
T ss_dssp HHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHHHCC
Confidence 77777777777776433 47777777777777777777777777777777777777777777776 77777776543
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=7.5e-27 Score=193.35 Aligned_cols=129 Identities=25% Similarity=0.303 Sum_probs=124.0
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHH
Q 022566 162 KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAI 241 (295)
Q Consensus 162 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~ 241 (295)
.+|..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 35888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 242 QSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 242 ~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+...
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 158 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR----SEIVKKLLELGA 158 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC----HHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHCCC
Confidence 9999999999999999999999999999999999997 899999987643
No 57
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=3.3e-26 Score=212.59 Aligned_cols=157 Identities=28% Similarity=0.304 Sum_probs=145.2
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+++.|+..+..+.++.|+..|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 212 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~ 289 (437)
T 1n11_A 212 GYTPLHIAAKQNQVEVARSLLQYGGSANAE--SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEG 289 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 346788899999999999999998887654 778999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+
T Consensus 290 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~----~~iv~~Ll~ 365 (437)
T 1n11_A 290 HVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH----TDIVTLLLK 365 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHH
T ss_pred CHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCCh----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997 899999987
Q ss_pred cCC
Q 022566 292 LPV 294 (295)
Q Consensus 292 lp~ 294 (295)
..+
T Consensus 366 ~ga 368 (437)
T 1n11_A 366 NGA 368 (437)
T ss_dssp TTC
T ss_pred CcC
Confidence 643
No 58
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=8.2e-26 Score=196.72 Aligned_cols=159 Identities=22% Similarity=0.244 Sum_probs=148.6
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccC--------CCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCCh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKI--------STAKWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGAT 202 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~--------d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~t 202 (295)
...+++.|+..+..+.++.|+..|++++.... +..|.||||+|+..|+.+++++|++. |++++..+..|.|
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 184 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 35679999999999999999999998876422 67799999999999999999999997 9999999999999
Q ss_pred HHHHHHHhCC----HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHhcC
Q 022566 203 PLHYAVQVGA----MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLI-NGADKSRKTKDGKTALDMSLCYG 277 (295)
Q Consensus 203 pLh~A~~~g~----~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~TpL~~A~~~g 277 (295)
|||+|+..++ .+++++|+++|++++.++..|+||||+|+..|+.+++++|++ +|++++.+|..|.||||+|+..|
T Consensus 185 ~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 9999999999 999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred CCCChHHHHHHhhhcCC
Q 022566 278 RDFKSYDLAKLLKILPV 294 (295)
Q Consensus 278 ~~~~~~~iv~~L~~lp~ 294 (295)
+ .+++++|.+..+
T Consensus 265 ~----~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 265 L----KKIAELLCKRGA 277 (285)
T ss_dssp C----HHHHHHHHHHSS
T ss_pred c----HHHHHHHHHcCC
Confidence 7 999999987654
No 59
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=4.6e-27 Score=200.98 Aligned_cols=141 Identities=26% Similarity=0.347 Sum_probs=116.5
Q ss_pred HHHHHhcCCCCCcc-cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCC
Q 022566 148 EREILNQNATPNLG-KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDV 226 (295)
Q Consensus 148 ~~~lL~~g~~~~~~-~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~i 226 (295)
++.||..+++++.. ..+..+.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 35677788877643 44667888999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHH--HhcCCCCChHHHHHHhhhc
Q 022566 227 NVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKT-KDGKTALDMS--LCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 227 n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~TpL~~A--~~~g~~~~~~~iv~~L~~l 292 (295)
+.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..|+ .+++++|.+.
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~----~~~v~~Ll~~ 145 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY----ADCATYLADV 145 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH----HHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh----HHHHHHHHHc
Confidence 9999999999999999999999999999999999886 5899999999 77775 8999988653
No 60
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=2.6e-26 Score=176.76 Aligned_cols=119 Identities=26% Similarity=0.358 Sum_probs=110.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 55688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 244 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
|+.+++++|+++|++++.+|..|.||||+|.. .++.++|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~-------~~~~~ll 122 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDN-------QAIKALL 122 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC-------HHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC-------HHHHHHh
Confidence 99999999999999999999999999999943 4555555
No 61
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=9e-26 Score=202.41 Aligned_cols=155 Identities=22% Similarity=0.237 Sum_probs=95.2
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34555555566666666666555554432 5555566666666666666666666666666555556666666666666
Q ss_pred HHHHHHHHhCCCCCcccC------------------------------------------------------CCCChHHH
Q 022566 213 MQSVKLLIKYNVDVNVAD------------------------------------------------------NEGWTPLH 238 (295)
Q Consensus 213 ~~~v~~Ll~~ga~in~~d------------------------------------------------------~~g~TpLh 238 (295)
.+++++|+++|++++..+ ..|.||||
T Consensus 137 ~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~ 216 (351)
T 3utm_A 137 VEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALH 216 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHH
Confidence 666666666655554332 33445555
Q ss_pred HHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 239 IAIQS---RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 239 ~A~~~---g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
+|+.. +..+++++|+++|++++.++..|.||||+|+..|+ .+++++|.+.+
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g 270 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAH----NDVMEVLHKHG 270 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred HHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCC----HHHHHHHHHCC
Confidence 55555 33556666666666777777788888888888886 78888876654
No 62
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=6.1e-26 Score=192.86 Aligned_cols=156 Identities=23% Similarity=0.285 Sum_probs=144.4
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA 212 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~ 212 (295)
..+++.|+..+..+.++.|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLI--DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence 46789999999999999999999888764 7889999999999999999999999999999999999999999997776
Q ss_pred -HHHHHHHHhCCCCCcccCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 213 -MQSVKLLIKYNVDVNVADN-EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 213 -~~~v~~Ll~~ga~in~~d~-~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
..++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+ .+++++|.
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~----~~~v~~L~ 230 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN----VWMINHLQ 230 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC----HHHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc----HHHHHHHH
Confidence 8899999999999999987 89999999999999999999999999999999999999999999997 99999998
Q ss_pred hcCC
Q 022566 291 ILPV 294 (295)
Q Consensus 291 ~lp~ 294 (295)
+...
T Consensus 231 ~~~~ 234 (240)
T 3eu9_A 231 EARQ 234 (240)
T ss_dssp HHC-
T ss_pred Hhhh
Confidence 7653
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=3.4e-26 Score=185.03 Aligned_cols=125 Identities=22% Similarity=0.275 Sum_probs=120.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
.|.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 246 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 246 ~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+.+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~ 126 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNH----VKCVKMLLESGA 126 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999999999999999997 999999987543
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=1.2e-26 Score=200.85 Aligned_cols=160 Identities=21% Similarity=0.180 Sum_probs=137.7
Q ss_pred cHHHHHHHHhcChHHHHHHHh----cCCCCCccc--CCCCCChHHHHHH---HcCCHHHHHHHHhCCCC-----------
Q 022566 133 EEDLLKEVEQLLEPEEREILN----QNATPNLGK--ISTAKWRPLQTLT---LSMQIRYMDMLLDGGLD----------- 192 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~----~g~~~~~~~--~d~~g~t~Lh~A~---~~g~~~~v~~Ll~~g~d----------- 192 (295)
...++.|+..++.+.++.++. .+.+++... .+..|+||||+|+ ..|+.+++++|++.|++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 357999999999997766666 888887653 2477999999999 67999999999998744
Q ss_pred CCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccC--------------CCCChHHHHHHHcCCHHHHHHHHH---c
Q 022566 193 IDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD--------------NEGWTPLHIAIQSRNRDIAKVLLI---N 255 (295)
Q Consensus 193 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d--------------~~g~TpLh~A~~~g~~~iv~~Ll~---~ 255 (295)
++..|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|++ +
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 165 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 44455689999999999999999999999999999998 689999999999999999999999 9
Q ss_pred CCCCCCCCCCCCCHHHHHHhcCCCCC-----hHHHHHHhhhc
Q 022566 256 GADKSRKTKDGKTALDMSLCYGRDFK-----SYDLAKLLKIL 292 (295)
Q Consensus 256 gad~~~~d~~g~TpL~~A~~~g~~~~-----~~~iv~~L~~l 292 (295)
|++++.+|..|.||||+|+..|+... ..+++++|.+.
T Consensus 166 ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 207 (260)
T 3jxi_A 166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK 207 (260)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh
Confidence 99999999999999999998876211 15788887643
No 65
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=9.4e-27 Score=205.20 Aligned_cols=155 Identities=12% Similarity=0.029 Sum_probs=133.5
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCC-ChHHHHHHHhC
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDG-ATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g-~tpLh~A~~~g 211 (295)
..+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQ--FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC
Confidence 5678888888889999999988888776 47788899999999999999999999999999888888 79999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHhcCCCCChHHHHHHhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTA-LDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~Tp-L~~A~~~g~~~~~~~iv~~L~ 290 (295)
+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..|+ .+++++|.
T Consensus 141 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~----~~~v~~Ll 215 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKD----IEMLQALF 215 (285)
T ss_dssp CHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTC----HHHHHHHT
T ss_pred CHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCC----HHHHHHHH
Confidence 999999999988876322 278899999999999999999999999999999999997 999999987 89999987
Q ss_pred hcCC
Q 022566 291 ILPV 294 (295)
Q Consensus 291 ~lp~ 294 (295)
+..+
T Consensus 216 ~~ga 219 (285)
T 3kea_A 216 KYDI 219 (285)
T ss_dssp TSCB
T ss_pred HcCC
Confidence 6543
No 66
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.5e-26 Score=203.91 Aligned_cols=152 Identities=24% Similarity=0.211 Sum_probs=140.5
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+|+.|+..+..+.++.|+..|++++.. +|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g 106 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSG 106 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcC
Confidence 345799999999999999999999888754 4899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCC-ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 212 AMQSVKLLIKYNVDVNVADNEG-WTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g-~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|+++... ..|.||||+|+..|+ .+++++|.
T Consensus 107 ~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~----~~~v~~Ll 181 (285)
T 3kea_A 107 NMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGH----VDMMILLL 181 (285)
T ss_dssp CHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTC----HHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcCh----HHHHHHHH
Confidence 9999999999999999999999 79999999999999999999999987333 289999999999997 99999996
Q ss_pred hc
Q 022566 291 IL 292 (295)
Q Consensus 291 ~l 292 (295)
+.
T Consensus 182 ~~ 183 (285)
T 3kea_A 182 DY 183 (285)
T ss_dssp HH
T ss_pred Hc
Confidence 53
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=5.5e-27 Score=204.69 Aligned_cols=161 Identities=24% Similarity=0.197 Sum_probs=137.5
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhc----CCCCCcc--cCCCCCChHHHHHHHc---CCHHHHHHHHhCCCCC-------C
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQ----NATPNLG--KISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDI-------D 194 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~----g~~~~~~--~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~d~-------~ 194 (295)
....+|+.|+..++.+.++.|++. +.+.+-. ..+..|+||||+|+.. |+.+++++|++.|+++ +
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 345789999999999999988874 4333211 3478999999999987 9999999999988653 2
Q ss_pred c----cCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCC--------------CCChHHHHHHHcCCHHHHHHHHH--
Q 022566 195 S----VDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADN--------------EGWTPLHIAIQSRNRDIAKVLLI-- 254 (295)
Q Consensus 195 ~----~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~--------------~g~TpLh~A~~~g~~~iv~~Ll~-- 254 (295)
. .|..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2 567899999999999999999999999999999987 79999999999999999999999
Q ss_pred -cCCCCCCCCCCCCCHHHHHHhcCCCCC-----hHHHHHHhhh
Q 022566 255 -NGADKSRKTKDGKTALDMSLCYGRDFK-----SYDLAKLLKI 291 (295)
Q Consensus 255 -~gad~~~~d~~g~TpL~~A~~~g~~~~-----~~~iv~~L~~ 291 (295)
+|++++.+|..|+||||+|+..|+... ..+++++|..
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI 214 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH
Confidence 999999999999999999999886211 1578888764
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=7.5e-26 Score=183.75 Aligned_cols=127 Identities=29% Similarity=0.443 Sum_probs=120.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
...+.++||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 244 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+...
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH----LEIVEVLLKNGA 137 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 99999999999999999999999999999999997 999999987643
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=5.2e-26 Score=200.45 Aligned_cols=144 Identities=26% Similarity=0.353 Sum_probs=133.3
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCC-------------
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDK------------- 198 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~------------- 198 (295)
...+|+.|+..+..+.++.|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGANINQP--DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc
Confidence 346799999999999999999999888764 88899999999999999999999999999876653
Q ss_pred -----------------------------------------------CCChHHHHHHHhCCHHHHHHHHhCCCCCcccCC
Q 022566 199 -----------------------------------------------DGATPLHYAVQVGAMQSVKLLIKYNVDVNVADN 231 (295)
Q Consensus 199 -----------------------------------------------~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~ 231 (295)
.|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 477889999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q 022566 232 EGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYG 277 (295)
Q Consensus 232 ~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g 277 (295)
.|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+...
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 276 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997654
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1.1e-26 Score=186.29 Aligned_cols=128 Identities=22% Similarity=0.267 Sum_probs=119.9
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCCh-HHHHH
Q 022566 162 KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWT-PLHIA 240 (295)
Q Consensus 162 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~T-pLh~A 240 (295)
..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 34677899999999999999999999999999999999999999996 99999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 241 IQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 241 ~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+..+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----~~~v~~Ll~~ga 135 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH----RDVARYLRAAAG 135 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTC----HHHHHHHSSCC-
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCH----HHHHHHHHHcCC
Confidence 99999999999999999999999999999999999997 899999977643
No 71
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=4.5e-26 Score=208.30 Aligned_cols=160 Identities=20% Similarity=0.273 Sum_probs=114.5
Q ss_pred hhcHHHHHHHHhcChHHHHHHHhcCCCCCcc----------------------------------cCCCCCChHHHHHHH
Q 022566 131 KYEEDLLKEVEQLLEPEEREILNQNATPNLG----------------------------------KISTAKWRPLQTLTL 176 (295)
Q Consensus 131 ~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~----------------------------------~~d~~g~t~Lh~A~~ 176 (295)
....+|+.|+..+..+.++.|+..|++++.. ..+..|+||||+|+.
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHH
Confidence 3455677777777777888887777766542 124445555555555
Q ss_pred cC---CHHHHHHHHhCCCCCCc--------cCCCCChHHHHHHHhCCHHHHHHHHhCC-CCCcccCCCCChHHHHHHHcC
Q 022566 177 SM---QIRYMDMLLDGGLDIDS--------VDKDGATPLHYAVQVGAMQSVKLLIKYN-VDVNVADNEGWTPLHIAIQSR 244 (295)
Q Consensus 177 ~g---~~~~v~~Ll~~g~d~~~--------~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~in~~d~~g~TpLh~A~~~g 244 (295)
.+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcC
Confidence 55 55666666666666654 4556777777777777778888888664 778888888888888888888
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 245 NRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 245 ~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
+.+++++|+++|++++.+|..|.|||++|+.+|+ .+|+++|.+..+
T Consensus 325 ~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~----~~iv~~Ll~~~a 370 (373)
T 2fo1_E 325 RIEVVMYLIQQGASVEAVDATDHTARQLAQANNH----HNIVDIFDRCRP 370 (373)
T ss_dssp CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTC----HHHHHHHHTTC-
T ss_pred CHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCc
Confidence 8888888888888888888888888888888886 788888876544
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=6.7e-28 Score=206.19 Aligned_cols=156 Identities=16% Similarity=0.150 Sum_probs=138.5
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
....|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQ--PNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 34578999999999999999999998876 4889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccC-CCCChHHHHH--HHcCCHHHHHHHHHcCCCC-----------------------------
Q 022566 212 AMQSVKLLIKYNVDVNVAD-NEGWTPLHIA--IQSRNRDIAKVLLINGADK----------------------------- 259 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d-~~g~TpLh~A--~~~g~~~iv~~Ll~~gad~----------------------------- 259 (295)
+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|+++|+++
T Consensus 99 ~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~ 178 (229)
T 2vge_A 99 DTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGES 178 (229)
T ss_dssp CHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCE
T ss_pred CHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCcccccc
Confidence 9999999999999999987 6999999999 9999999999999876554
Q ss_pred ---CCCCCCCCCHHHHHHhcCCCCChHHHHH--HhhhcC
Q 022566 260 ---SRKTKDGKTALDMSLCYGRDFKSYDLAK--LLKILP 293 (295)
Q Consensus 260 ---~~~d~~g~TpL~~A~~~g~~~~~~~iv~--~L~~lp 293 (295)
+.+|..|.||||+|+..|+ .++++ +|..+|
T Consensus 179 ~~~~~~d~~G~TpL~~A~~~g~----~~~v~~~~l~~~p 213 (229)
T 2vge_A 179 VTVLRRDGPEETDWWWAALHGQ----EGYVPRNYFGLFP 213 (229)
T ss_dssp EEEEESSCTTCSSEEEEEETTE----EEEEEGGGEESSC
T ss_pred ccccccCCCcccHHHHHHHcCC----cceeehhhhhhCC
Confidence 3456778899999999887 56665 344444
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=9.7e-27 Score=204.26 Aligned_cols=151 Identities=21% Similarity=0.225 Sum_probs=137.3
Q ss_pred HHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCC-CCCccCCCCChHHHHHH-----Hh
Q 022566 137 LKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGL-DIDSVDKDGATPLHYAV-----QV 210 (295)
Q Consensus 137 ~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-d~~~~d~~g~tpLh~A~-----~~ 210 (295)
+.++..+....++.++..+.+..++..|..|+||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~ 160 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQ 160 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSH
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhh
Confidence 4556666677777777666554445568999999999999999999999999998 99999999999999999 67
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
++.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.
T Consensus 161 ~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~----~~iv~~Ll 236 (276)
T 4hbd_A 161 DDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH----KEIAGLLL 236 (276)
T ss_dssp HHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC----HHHHHHHH
T ss_pred hhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC----HHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999997 99999998
Q ss_pred h
Q 022566 291 I 291 (295)
Q Consensus 291 ~ 291 (295)
.
T Consensus 237 ~ 237 (276)
T 4hbd_A 237 A 237 (276)
T ss_dssp T
T ss_pred h
Confidence 7
No 74
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=3.3e-25 Score=188.31 Aligned_cols=154 Identities=23% Similarity=0.193 Sum_probs=87.6
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+++.|+..+..+.++.|++.+.+++.. .+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 122 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKGAIVDQL-GGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHT 122 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC-BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCcchhh-cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHH
Confidence 3455555555555555555555544422 233355555555555555555555555555555555555666666655555
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCC-HHHHHHHHHcCCCCCCCCC-CCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN-RDIAKVLLINGADKSRKTK-DGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~-~~iv~~Ll~~gad~~~~d~-~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
+++++|+++|++++.++..|.||||+|+..++ .+++++|+++|++++..+. .|.||||+|+..|+ .+++++|.+
T Consensus 123 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~ 198 (240)
T 3eu9_A 123 SIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGN----TTVISLLLE 198 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTC----HHHHHHHHH
T ss_pred HHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCC----HHHHHHHHH
Confidence 66666655555555555555566666554444 5555555555666555554 55666666666654 566666654
Q ss_pred c
Q 022566 292 L 292 (295)
Q Consensus 292 l 292 (295)
.
T Consensus 199 ~ 199 (240)
T 3eu9_A 199 A 199 (240)
T ss_dssp H
T ss_pred c
Confidence 3
No 75
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=1.4e-25 Score=204.97 Aligned_cols=139 Identities=23% Similarity=0.279 Sum_probs=102.7
Q ss_pred HHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCC--
Q 022566 146 PEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYN-- 223 (295)
Q Consensus 146 ~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-- 223 (295)
..++.++..|++++.. |..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus 147 ~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 224 (373)
T 2fo1_E 147 HEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKL 224 (373)
T ss_dssp HHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHH
T ss_pred HHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcc
Confidence 3456788899988764 889999999999999999999999999999999888888888888888888888777776
Q ss_pred -CCCcccCCCCChHHHHHHHcC---CHHHHHHHHHcCCCCCC--------CCCCCCCHHHHHHhcCCCCChHHHHHHhh
Q 022566 224 -VDVNVADNEGWTPLHIAIQSR---NRDIAKVLLINGADKSR--------KTKDGKTALDMSLCYGRDFKSYDLAKLLK 290 (295)
Q Consensus 224 -a~in~~d~~g~TpLh~A~~~g---~~~iv~~Ll~~gad~~~--------~d~~g~TpL~~A~~~g~~~~~~~iv~~L~ 290 (295)
++++..+..|+||||+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+ .+++++|.
T Consensus 225 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll 299 (373)
T 2fo1_E 225 KGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN----MPIVKYLV 299 (373)
T ss_dssp HHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC----HHHHHHHH
T ss_pred ccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCC----HHHHHHHH
Confidence 566666666666666666655 55556666655555554 34455555555555554 55555554
No 76
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1e-25 Score=181.10 Aligned_cols=123 Identities=17% Similarity=0.223 Sum_probs=117.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
...||||.|+..|+.+++++|++.|++++..+..|+||||+|+. |+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35689999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcC
Q 022566 246 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILP 293 (295)
Q Consensus 246 ~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp 293 (295)
.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+.+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g 126 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH----LRVVEFLVKHT 126 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHHcc
Confidence 999999999999999999999999999999997 99999997654
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=3.4e-25 Score=176.85 Aligned_cols=122 Identities=26% Similarity=0.318 Sum_probs=116.5
Q ss_pred ChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHH
Q 022566 168 WRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRD 247 (295)
Q Consensus 168 ~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~ 247 (295)
.++||.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 489999999999999999999999887 5888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 248 IAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 248 iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+...
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 124 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNH----QEVVELLIKYGA 124 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 9999999999999999999999999999997 899999987653
No 78
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=3.1e-26 Score=194.05 Aligned_cols=125 Identities=26% Similarity=0.327 Sum_probs=115.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhC-CCCCcccCCCCChHHHHHHH
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKY-NVDVNVADNEGWTPLHIAIQ 242 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~ 242 (295)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.|+.+++++|+++|++++.+|..|.|||++|+..|+ .++++.|...
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~----~~~l~~l~~~ 195 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC----ASLLKKKQGT 195 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH----HHHHC-----
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH----HHHHHHHhcc
Confidence 999999999999999999999999999999999885 8888877654
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=4.1e-25 Score=180.92 Aligned_cols=126 Identities=26% Similarity=0.331 Sum_probs=117.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 165 TAKWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 165 ~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
..+.++||.|+..|+.+++++|++. +.+++..+..|+||||+|+..|+.+++++|++.|++++.++..|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4577899999999999999999997 778999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 244 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.....
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 129 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQ----DQVAEDLVANGA 129 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHCCC
Confidence 99999999999999999999999999999999997 899999987653
No 80
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=1.1e-24 Score=195.67 Aligned_cols=155 Identities=26% Similarity=0.305 Sum_probs=144.0
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
-...|+.|+..++.+.++.||+.|+++|.. .+..|+||||+|+..|+.++|++|+++|++++.++..+.++++.++..+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~-~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCcc-CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 456799999999999999999999999865 2456999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCCHHHHHHhcCCCCC
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRK----------TKDGKTALDMSLCYGRDFK 281 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~----------d~~g~TpL~~A~~~g~~~~ 281 (295)
...++..++..+++++..|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~--- 180 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH--- 180 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC---
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC---
Confidence 999999999999999999999999999999999999999999999998764 4468999999999997
Q ss_pred hHHHHHHhhh
Q 022566 282 SYDLAKLLKI 291 (295)
Q Consensus 282 ~~~iv~~L~~ 291 (295)
.+++++|..
T Consensus 181 -~~~v~~LL~ 189 (337)
T 4g8k_A 181 -VEVLKILLD 189 (337)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHh
Confidence 999999863
No 81
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=3.7e-26 Score=205.35 Aligned_cols=153 Identities=20% Similarity=0.155 Sum_probs=128.5
Q ss_pred HHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCC---H
Q 022566 137 LKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGA---M 213 (295)
Q Consensus 137 ~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~---~ 213 (295)
+.++.......++.++..|++++.. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+ .
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~-~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIP-VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSC-CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 3455566667777777788887762 48889999999999999999999999999999999999999999999988 6
Q ss_pred HHHHHHHhCC-CCCcccCCCCChHHHHHHH----cCCHHHHHHHHHcCC-------------------------------
Q 022566 214 QSVKLLIKYN-VDVNVADNEGWTPLHIAIQ----SRNRDIAKVLLINGA------------------------------- 257 (295)
Q Consensus 214 ~~v~~Ll~~g-a~in~~d~~g~TpLh~A~~----~g~~~iv~~Ll~~ga------------------------------- 257 (295)
++++.|++.+ ++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------C
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCC
Confidence 7778888875 7799999999999999998 899999999987743
Q ss_pred --------------CCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 258 --------------DKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 258 --------------d~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
+++.+|..|+||||+|+.+|+ .+++++|.+..+
T Consensus 261 ~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~----~~~v~~Ll~~Ga 307 (327)
T 1sw6_A 261 SILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN----ISIVDALLDYGA 307 (327)
T ss_dssp HHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCC----HHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 578888899999999999997 899999987654
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=1e-24 Score=195.92 Aligned_cols=156 Identities=22% Similarity=0.270 Sum_probs=105.9
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCccc--------CCCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCChHH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGK--------ISTAKWRPLQTLTLSMQIRYMDMLLD-GGLDIDSVDKDGATPL 204 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~--------~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL 204 (295)
.+++.|+..+..+.++.++..|++++... .+..|.||||+|+..|+.++|++|++ .|++++.++..|.|+|
T Consensus 127 t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l 206 (337)
T 4g8k_A 127 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 206 (337)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHH
Confidence 45677777777777777777777665432 24456777777777777777777774 5777777777777777
Q ss_pred HHHHHhCC----HHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHhcCCC
Q 022566 205 HYAVQVGA----MQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLIN-GADKSRKTKDGKTALDMSLCYGRD 279 (295)
Q Consensus 205 h~A~~~g~----~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~TpL~~A~~~g~~ 279 (295)
|+++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.. |++++.+|..|+||||+|+.+|+
T Consensus 207 ~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~- 285 (337)
T 4g8k_A 207 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL- 285 (337)
T ss_dssp HHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC-
T ss_pred HHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC-
Confidence 66665443 3466677777777777777777777777777777777776654 66777777777777777777775
Q ss_pred CChHHHHHHhhhcC
Q 022566 280 FKSYDLAKLLKILP 293 (295)
Q Consensus 280 ~~~~~iv~~L~~lp 293 (295)
.+|+++|.+..
T Consensus 286 ---~~iv~~Ll~~G 296 (337)
T 4g8k_A 286 ---KKIAELLCKRG 296 (337)
T ss_dssp ---HHHHHHHHTTS
T ss_pred ---HHHHHHHHHCC
Confidence 67777766543
No 83
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.9e-25 Score=179.21 Aligned_cols=127 Identities=23% Similarity=0.313 Sum_probs=119.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHh-CCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHH
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLD-GGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 242 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 242 (295)
+..+.|+||.|+..|+.++++.|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 6678899999999999999999998 567788888899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
.|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+...
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 132 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK----YEICKLLLQHGA 132 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999999999999999999997 999999987643
No 84
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.6e-25 Score=184.45 Aligned_cols=127 Identities=24% Similarity=0.325 Sum_probs=100.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccC-CCCChHHHHHHH
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQ 242 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d-~~g~TpLh~A~~ 242 (295)
+..|.||||+|+..|+.++++.|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3456788888888888888888888 88888888888888888888888888888888888888777 778888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCC------------hHHHHHHhhh
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFK------------SYDLAKLLKI 291 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~------------~~~iv~~L~~ 291 (295)
.|+.+++++|+++|++++.+|..|.||||+|+..++... ..+++++|.+
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHH
Confidence 888888888888888888888888888888876533211 3677777754
No 85
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=3.6e-25 Score=179.84 Aligned_cols=124 Identities=20% Similarity=0.266 Sum_probs=117.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCC-CCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 167 KWRPLQTLTLSMQIRYMDMLLDGGLD-IDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 167 g~t~Lh~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
+.+|||.|+..|+.++++.|++.+.+ ++..+..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 46899999999999999999999887 88889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 246 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 246 ~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+...
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ga 126 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNH----VKCVEALLARGA 126 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 999999999999999999999999999999997 999999987643
No 86
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=5.2e-26 Score=204.35 Aligned_cols=146 Identities=20% Similarity=0.094 Sum_probs=132.3
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCC---HHHHHHHHhCC-CCCCccCCCCChHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQ---IRYMDMLLDGG-LDIDSVDKDGATPLH 205 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-~d~~~~d~~g~tpLh 205 (295)
.....+|+.|+..+..+.++.||+.|++++. .+..|+||||+|+..|+ .++++.|++.+ ++++.++..|+||||
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~--~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLY--GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH 206 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTB--CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHH
Confidence 4456789999999999999999999999885 48899999999999998 68888888876 789999999999999
Q ss_pred HHHH----hCCHHHHHHHHhCCC---------------------------------------------CCcccCCCCChH
Q 022566 206 YAVQ----VGAMQSVKLLIKYNV---------------------------------------------DVNVADNEGWTP 236 (295)
Q Consensus 206 ~A~~----~g~~~~v~~Ll~~ga---------------------------------------------~in~~d~~g~Tp 236 (295)
+|+. .|+.+++++|++.++ +++.+|..|+||
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~Tp 286 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCH
Confidence 9999 899999999998743 578889999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q 022566 237 LHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYG 277 (295)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g 277 (295)
||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 287 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 287 LNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 99999999999999999999999999999999999998765
No 87
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=198.74 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=125.0
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCccc----CCCCCChHHHHHHHc---CCHHHHHHHHhCCCCCCccCCCCChHH
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGK----ISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDIDSVDKDGATPL 204 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~----~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL 204 (295)
....|+.|+..++...++.++..|++++... .+..|+||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 3467999999999999999999999887521 478899999999997 899999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q 022566 205 HYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 278 (295)
Q Consensus 205 h~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 278 (295)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+.+|+
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999987 58999999999987
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=3.9e-25 Score=190.63 Aligned_cols=121 Identities=26% Similarity=0.372 Sum_probs=73.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccC-CCCChHHHHHHHcC
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVAD-NEGWTPLHIAIQSR 244 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d-~~g~TpLh~A~~~g 244 (295)
.|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 34555666666666666655555 55555555555666666666666666666666665555555 45556666666666
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHH----------------hcCCCCChHHHHHHhhh
Q 022566 245 NRDIAKVLLINGADKSRKTKDGKTALDMSL----------------CYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 245 ~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~----------------~~g~~~~~~~iv~~L~~ 291 (295)
+.+++++|+++|++++.+|..|.||||+|+ ..|+ .+++++|..
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~----~~iv~~L~~ 181 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL----EKVINVLEG 181 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHH----HHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcCh----HHHHHHHHH
Confidence 666666666556665555555555555555 6664 788988865
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=3.3e-24 Score=167.93 Aligned_cols=125 Identities=30% Similarity=0.411 Sum_probs=118.0
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQ 209 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~ 209 (295)
.....+++.|+..++.+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNA--KDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3456789999999999999999999988775 48889999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 022566 210 VGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLING 256 (295)
Q Consensus 210 ~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~g 256 (295)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999886
No 90
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.1e-24 Score=174.09 Aligned_cols=121 Identities=22% Similarity=0.262 Sum_probs=115.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 167 KWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 167 g~t~Lh~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
+.|+||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46899999999999999999998 45899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 246 RDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 246 ~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|...
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~ 123 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGH----TAVVSFLAAE 123 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC----HHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhCh----HHHHHHHHhc
Confidence 999999999999999999999999999999997 9999999754
No 91
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=5.5e-25 Score=172.36 Aligned_cols=124 Identities=23% Similarity=0.356 Sum_probs=118.1
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCC-CChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKD-GATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~-g~tpLh~A~~~ 210 (295)
...+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+. |+.+++++|+++|++++.++.. |.||||+|+..
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 88 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAGADPNA--LNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCcCC--cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHc
Confidence 34579999999999999999999988775 48899999999999 9999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 258 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 258 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+|
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 89 GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999986
No 92
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=1.1e-24 Score=186.84 Aligned_cols=126 Identities=18% Similarity=0.139 Sum_probs=87.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
+..|.||||.|+..++.++++.|+++|++++.. ..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 346899999999999999999999999999864 6789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 244 RNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 244 g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+..+
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll~~ga 127 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN----VQVCKFLVESGA 127 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCC
Confidence 99999999999999999999999999999999997 999999987653
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.5e-23 Score=160.63 Aligned_cols=123 Identities=31% Similarity=0.456 Sum_probs=117.6
Q ss_pred HHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCH
Q 022566 134 EDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAM 213 (295)
Q Consensus 134 ~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~ 213 (295)
.+++.|+..+..+.++.|+..+.+++. .+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 4 t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 4 TPLHLAARNGHLEVVKLLLEAGADVNA--KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 468899999999999999999988765 488899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 022566 214 QSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 258 (295)
Q Consensus 214 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 258 (295)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++||+
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999986
No 94
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=8e-24 Score=154.82 Aligned_cols=93 Identities=37% Similarity=0.614 Sum_probs=78.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCC
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRN 245 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 245 (295)
+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 36788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcCCC
Q 022566 246 RDIAKVLLINGAD 258 (295)
Q Consensus 246 ~~iv~~Ll~~gad 258 (295)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 8888888888874
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=1.9e-23 Score=190.59 Aligned_cols=122 Identities=26% Similarity=0.371 Sum_probs=87.7
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHhCCCCCCccC--CCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHH
Q 022566 166 AKWRPLQTLTLS-MQIRYMDMLLDGGLDIDSVD--KDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 242 (295)
Q Consensus 166 ~g~t~Lh~A~~~-g~~~~v~~Ll~~g~d~~~~d--~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 242 (295)
.+.|+||.|+.. |+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 344677777777 77777777777777777666 667777777777777777777777777777777777777777777
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhh
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKI 291 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~ 291 (295)
.|+.+++++|+++|++++.+|..|.||||+|+..|+ .+|+++|+.
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~----~~iv~lLl~ 322 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN----ADIVTLLRL 322 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHH
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC----HHHHHHHHH
Confidence 777777777777777777777777777777777775 677777653
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=4e-23 Score=183.64 Aligned_cols=123 Identities=23% Similarity=0.232 Sum_probs=116.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCc------cCCCCChHHHHHHHh---CCHHHHHHHHhCCCCCcccCCCCChH
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDS------VDKDGATPLHYAVQV---GAMQSVKLLIKYNVDVNVADNEGWTP 236 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~------~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~in~~d~~g~Tp 236 (295)
...++||.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 345789999999999999999999999998 688999999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 237 LHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+|+++|...
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~----~~iv~~Ll~~ 281 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH----KECEELLEQA 281 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC----HHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHHh
Confidence 999999999999999999999999999999999999999997 8999999753
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=2.9e-23 Score=182.49 Aligned_cols=125 Identities=19% Similarity=0.242 Sum_probs=75.7
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCC----cccCCCCCChHHHHHHHc---CCHHHHHHHHhCCCCCCccCCCCChHHH
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPN----LGKISTAKWRPLQTLTLS---MQIRYMDMLLDGGLDIDSVDKDGATPLH 205 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~----~~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpLh 205 (295)
...++.|+..++...+..++..|.+++ +...+..|+||||+|+.. |+.+++++|+++|++++.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 345566666666666666666665544 223355566666666665 5566666666666666666666666666
Q ss_pred HHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q 022566 206 YAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGA 257 (295)
Q Consensus 206 ~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ga 257 (295)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 6666666666666666666666666666666666666666666666666655
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=3.5e-23 Score=196.15 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=114.8
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCcc----cCCCCCChHHHHHHH---cCCHHHHHHHHhCCCCCCccCCCCChHHH
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNLG----KISTAKWRPLQTLTL---SMQIRYMDMLLDGGLDIDSVDKDGATPLH 205 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~~----~~d~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh 205 (295)
...|+.|+..++.+.++.||..|++++.. ..+..|+||||+||. .|+.+++++|+++|+++|.+|..|+||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 46799999999999999999999888754 237789999999976 89999999999999999999999999999
Q ss_pred HHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q 022566 206 YAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCY 276 (295)
Q Consensus 206 ~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~ 276 (295)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. ||+|+++..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeeccc
Confidence 99999999999999999999999999999999999999999999999999999876 566666543
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2.1e-23 Score=197.78 Aligned_cols=125 Identities=22% Similarity=0.210 Sum_probs=118.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCCCcc------CCCCChHHHHHHH---hCCHHHHHHHHhCCCCCcccCCCCChH
Q 022566 166 AKWRPLQTLTLSMQIRYMDMLLDGGLDIDSV------DKDGATPLHYAVQ---VGAMQSVKLLIKYNVDVNVADNEGWTP 236 (295)
Q Consensus 166 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~------d~~g~tpLh~A~~---~g~~~~v~~Ll~~ga~in~~d~~g~Tp 236 (295)
...+.||.|+..|+.++++.|++.|++++.. +..|.||||+||. .|+.+++++|+++|+++|.+|..|+||
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 3448999999999999999999999999987 8899999999977 899999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhcCC
Q 022566 237 LHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 237 Lh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~lp~ 294 (295)
||+|+..|+.+++++|+++||+++.+|..|.||||+|+..|+ .+++++|.+..+
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----~~~~~~Ll~~ga 264 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH----KECEELLEQAQA 264 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTC----HHHHHHHHHTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999998 999999987654
No 100
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=4.3e-24 Score=162.17 Aligned_cols=108 Identities=31% Similarity=0.429 Sum_probs=103.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHH
Q 022566 163 ISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQ 242 (295)
Q Consensus 163 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 242 (295)
.|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHH
Q 022566 243 SRNRDIAKVLLINGADKSRKTKDGKTAL 270 (295)
Q Consensus 243 ~g~~~iv~~Ll~~gad~~~~d~~g~TpL 270 (295)
.|+.+++++|+++|++++.++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999884
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1e-22 Score=179.08 Aligned_cols=125 Identities=22% Similarity=0.272 Sum_probs=117.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCCC------ccCCCCChHHHHHHHh---CCHHHHHHHHhCCCCCcccCCCCC
Q 022566 164 STAKWRPLQTLTLSMQIRYMDMLLDGGLDID------SVDKDGATPLHYAVQV---GAMQSVKLLIKYNVDVNVADNEGW 234 (295)
Q Consensus 164 d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~------~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~in~~d~~g~ 234 (295)
.....++|+.|+..|+.+.+..++..|++++ ..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+
T Consensus 127 ~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~ 206 (278)
T 1dcq_A 127 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCC
T ss_pred cchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCC
Confidence 4455689999999999999999999999954 4478899999999999 899999999999999999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHhhhc
Q 022566 235 TPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 235 TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L~~l 292 (295)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+++++|.+.
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~----~~~v~~Ll~~ 260 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH----EHCEELLTQA 260 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC----HHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCC----HHHHHHHHHc
Confidence 99999999999999999999999999999999999999999997 8999999764
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.3e-22 Score=148.34 Aligned_cols=92 Identities=39% Similarity=0.624 Sum_probs=87.5
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q 022566 199 DGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 278 (295)
Q Consensus 199 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 278 (295)
+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCChHHHHHHhhhcCC
Q 022566 279 DFKSYDLAKLLKILPV 294 (295)
Q Consensus 279 ~~~~~~iv~~L~~lp~ 294 (295)
.+++++|.+..+
T Consensus 81 ----~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 ----LEVVKLLLEAGA 92 (93)
T ss_dssp ----HHHHHHHHHTTC
T ss_pred ----HHHHHHHHHcCC
Confidence 999999987765
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=2.9e-22 Score=182.75 Aligned_cols=145 Identities=24% Similarity=0.337 Sum_probs=118.0
Q ss_pred cHHHHHHHHh-cChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 133 EEDLLKEVEQ-LLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 133 ~~~l~~ai~~-~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...|+.|+.. ++.+.++.||..|++++....+..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 279 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3478889998 999999999999999987654588999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHhcC
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGA---DKSRKTKDGKTALDMSLCYG 277 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~ga---d~~~~d~~g~TpL~~A~~~g 277 (295)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+.++. +....+..+.|+++++..+.
T Consensus 280 ~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred cHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998764 44566677899998887664
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=7.3e-23 Score=173.22 Aligned_cols=134 Identities=17% Similarity=0.138 Sum_probs=111.8
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCCCccCCCCChHHHHHHHh
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDG-GLDIDSVDKDGATPLHYAVQV 210 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpLh~A~~~ 210 (295)
....|+.|+..+..+.++.|+..|++++. .+..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNG--LDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHHhCCCCccc--cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 35689999999999999999999988775 488999999999999999999999998 999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 022566 211 GAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGK 267 (295)
Q Consensus 211 g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 267 (295)
|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|+.+|+.....+..|.
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999999999999999999999999999999888776653
No 105
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=2.7e-22 Score=154.11 Aligned_cols=110 Identities=24% Similarity=0.301 Sum_probs=103.3
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+++.|+..++.+.++.|+..+.+++. .+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVNR--TLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTS--CCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcCc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 45789999999999999999999988765 4889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHc
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQS 243 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 243 (295)
+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 99999999999999999999999999999433
No 106
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=1.6e-22 Score=158.30 Aligned_cols=125 Identities=21% Similarity=0.286 Sum_probs=112.8
Q ss_pred hcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhC
Q 022566 132 YEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVG 211 (295)
Q Consensus 132 ~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g 211 (295)
...+|+.|+..+..+.++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQNGSDPNV--KDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG 87 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCc--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcC
Confidence 35679999999999999999999988775 4889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 022566 212 AMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGAD 258 (295)
Q Consensus 212 ~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad 258 (295)
+.+++++|+++|++++.+|..|.||||+|+..+..+++++|.+.+..
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 99999999999999999999999999999999999998888766543
No 107
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=1.8e-23 Score=191.37 Aligned_cols=147 Identities=9% Similarity=0.030 Sum_probs=124.6
Q ss_pred cHHHHHHHHhcChHHHHHHHhcCCCCCc-ccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCC---CccCCCCChHHHHHH
Q 022566 133 EEDLLKEVEQLLEPEEREILNQNATPNL-GKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI---DSVDKDGATPLHYAV 208 (295)
Q Consensus 133 ~~~l~~ai~~~~~~~~~~lL~~g~~~~~-~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~---~~~d~~g~tpLh~A~ 208 (295)
..+|+.|+..|..+.++.|+..|+.... ...+..|.||||+|+..|+.++|++|+++|+++ +..+.. .||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 4789999999999999999999874321 234567889999999999999999999999763 222222 89999999
Q ss_pred HhCCHHHHHHHHhCCCCCcc--cCCCCChHHHHHH-HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHH
Q 022566 209 QVGAMQSVKLLIKYNVDVNV--ADNEGWTPLHIAI-QSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGRDFKSYDL 285 (295)
Q Consensus 209 ~~g~~~~v~~Ll~~ga~in~--~d~~g~TpLh~A~-~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~i 285 (295)
..|+.+++++|+++|++++. .|..|+||||+|+ ..|+.++|++|+++|++ |.|||++|+.+|+ .++
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~----~ev 240 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGE----KYV 240 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTT----TTH
T ss_pred HCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCC----HHH
Confidence 99999999999999999887 8889999999999 99999999999998753 8999999999998 789
Q ss_pred HHHhhh
Q 022566 286 AKLLKI 291 (295)
Q Consensus 286 v~~L~~ 291 (295)
+++|.+
T Consensus 241 v~lL~~ 246 (376)
T 2aja_A 241 NPFIAR 246 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999865
No 108
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=2.9e-22 Score=165.83 Aligned_cols=129 Identities=13% Similarity=0.060 Sum_probs=114.2
Q ss_pred cHHHHHHHHhcCh----HHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCC------HHHHHHHHhCCCCCCccCCCCC-
Q 022566 133 EEDLLKEVEQLLE----PEEREILNQNATPNLGKISTAKWRPLQTLTLSMQ------IRYMDMLLDGGLDIDSVDKDGA- 201 (295)
Q Consensus 133 ~~~l~~ai~~~~~----~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~------~~~v~~Ll~~g~d~~~~d~~g~- 201 (295)
..+|+.|+..+.. +.++.||..|++++.. +..|+||||+|+..++ .+++++|+++|++++.+|..|+
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~--d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADIKSR--TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCC--CTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 4578888888764 4788999999998875 7899999999999987 6889999999999999999999
Q ss_pred hHHHHHHHhC-----CHHHHHHHHh-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 022566 202 TPLHYAVQVG-----AMQSVKLLIK-YNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKT 263 (295)
Q Consensus 202 tpLh~A~~~g-----~~~~v~~Ll~-~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d 263 (295)
||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|+++....+.++
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 9999999844 4679999999 999999999999999999999999999999998766655554
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=4.4e-21 Score=157.67 Aligned_cols=129 Identities=20% Similarity=0.274 Sum_probs=115.8
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD-KDGATPLHYAV 208 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A~ 208 (295)
.....+++.|+..+..+.++.|+. +.+++. .+..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~--~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDA--VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 355678999999999999999998 777665 58899999999999999999999999999999998 88999999999
Q ss_pred HhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q 022566 209 QVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLCYGR 278 (295)
Q Consensus 209 ~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 278 (295)
..|+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+||++|+..|+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGL 171 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCH
Confidence 99999999999999999999999999999999975432 346789999887765
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=3.3e-21 Score=165.91 Aligned_cols=125 Identities=22% Similarity=0.265 Sum_probs=114.4
Q ss_pred chhcHHHHHHHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccC-CCCChHHHHHH
Q 022566 130 SKYEEDLLKEVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVD-KDGATPLHYAV 208 (295)
Q Consensus 130 ~~~~~~l~~ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d-~~g~tpLh~A~ 208 (295)
.....+|+.|+..+..+.++.|+. +++++. .+..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDA--VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC--BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC--cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 345678999999999999999998 777765 58899999999999999999999999999999998 78999999999
Q ss_pred HhCCHHHHHHHHhCCCCCcccCCCCChHHHHHH----------------HcCCHHHHHHHHHcCC
Q 022566 209 QVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAI----------------QSRNRDIAKVLLINGA 257 (295)
Q Consensus 209 ~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~----------------~~g~~~iv~~Ll~~ga 257 (295)
..|+.+++++|+++|++++.+|..|+||||+|+ ..|+.+++++|++++.
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 999999999999999999999999999999888 6688999999998643
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=9.4e-21 Score=142.94 Aligned_cols=90 Identities=37% Similarity=0.527 Sum_probs=54.1
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q 022566 196 VDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSLC 275 (295)
Q Consensus 196 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~~ 275 (295)
.+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34455566666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCCCChHHHHHHh
Q 022566 276 YGRDFKSYDLAKLL 289 (295)
Q Consensus 276 ~g~~~~~~~iv~~L 289 (295)
.|+ .+++++|
T Consensus 100 ~~~----~~~~~~L 109 (110)
T 2zgd_A 100 NGN----EDLAEIL 109 (110)
T ss_dssp HTC----HHHHHHH
T ss_pred cCC----HHHHHHh
Confidence 664 5666555
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.83 E-value=4.6e-22 Score=181.97 Aligned_cols=137 Identities=7% Similarity=0.006 Sum_probs=112.4
Q ss_pred hcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCC---CccCCCCChHHHHHHHhCCHHHHHH
Q 022566 142 QLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDI---DSVDKDGATPLHYAVQVGAMQSVKL 218 (295)
Q Consensus 142 ~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~---~~~d~~g~tpLh~A~~~g~~~~v~~ 218 (295)
.+..+..+.++..|. .++||||+|+..|+.++|++|++.|+.. +..+..|.||||+|+..|+.++|++
T Consensus 76 ~~~~~~~~~l~~~g~---------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~ 146 (376)
T 2aja_A 76 RNAKQLWSDAHKKGI---------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 146 (376)
T ss_dssp TTCTTHHHHHHHHTC---------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHcCC---------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHH
Confidence 345566666666554 3459999999999999999999999832 2334568899999999999999999
Q ss_pred HHhCCCCC---cccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHH-hcCCCCChHHHHHHhhhc
Q 022566 219 LIKYNVDV---NVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSR--KTKDGKTALDMSL-CYGRDFKSYDLAKLLKIL 292 (295)
Q Consensus 219 Ll~~ga~i---n~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~--~d~~g~TpL~~A~-~~g~~~~~~~iv~~L~~l 292 (295)
|+++|+++ +..+.. +||||+|+..|+.++|++|+++|++++. .|..|.||||+|+ ..|+ .+|+++|.+.
T Consensus 147 Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~----~eiv~~Ll~~ 221 (376)
T 2aja_A 147 LCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH----HNVINFLLDC 221 (376)
T ss_dssp HHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC----HHHHHHHTTS
T ss_pred HHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC----HHHHHHHHhC
Confidence 99999762 333333 8999999999999999999999999887 8889999999999 9998 9999999763
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=1.4e-20 Score=142.62 Aligned_cols=96 Identities=38% Similarity=0.549 Sum_probs=91.7
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 022566 195 SVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLINGADKSRKTKDGKTALDMSL 274 (295)
Q Consensus 195 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~~gad~~~~d~~g~TpL~~A~ 274 (295)
.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCChHHHHHHhhhcCC
Q 022566 275 CYGRDFKSYDLAKLLKILPV 294 (295)
Q Consensus 275 ~~g~~~~~~~iv~~L~~lp~ 294 (295)
..|+ .+++++|.+..+
T Consensus 84 ~~~~----~~~~~~Ll~~ga 99 (115)
T 2l6b_A 84 KNGH----HEIVKLLDAKGA 99 (115)
T ss_dssp TTTC----HHHHHHHHTTSS
T ss_pred HCCC----HHHHHHHHHcCC
Confidence 9997 999999987654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=4.3e-20 Score=139.28 Aligned_cols=91 Identities=32% Similarity=0.486 Sum_probs=86.5
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHH
Q 022566 162 KISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAI 241 (295)
Q Consensus 162 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~ 241 (295)
..+..|.|+||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHH
Q 022566 242 QSRNRDIAKVL 252 (295)
Q Consensus 242 ~~g~~~iv~~L 252 (295)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 115
>3hki_C Proteinase-activated receptor 1; serine protease, acute phase, blood coagulation, cleavage on basic residues, disulfide bond; HET: NAG; 2.20A {Homo sapiens} PDB: 3hkj_C*
Probab=36.54 E-value=10 Score=18.75 Aligned_cols=13 Identities=31% Similarity=0.728 Sum_probs=9.8
Q ss_pred cccccccccccccc
Q 022566 4 FVLKNSYLHGFSTF 17 (295)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (295)
|.|+|+ -+||-+|
T Consensus 2 F~lrn~-~~~fEp~ 14 (21)
T 3hki_C 2 FLLRNP-NDKYEPF 14 (26)
T ss_pred eeeccC-ccccccc
Confidence 678887 7788766
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=30.34 E-value=58 Score=29.91 Aligned_cols=103 Identities=10% Similarity=0.016 Sum_probs=58.0
Q ss_pred HHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHH----HHHhCCCCCcccCCCCChHHHHHHHcCCHHHHH----HH
Q 022566 181 RYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVK----LLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAK----VL 252 (295)
Q Consensus 181 ~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~----~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~----~L 252 (295)
++.+.+...|..++.... .+.+...+..|..+-+. .+...|..++.... .+.|...++.|..+-+. .+
T Consensus 91 ~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHH
Confidence 566667778887765332 24455667788876544 44456776654322 24455566788866544 34
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHhcCCCCChHHHHHHh
Q 022566 253 LINGADKSRKTKDGKTALDMSLCYGRDFKSYDLAKLL 289 (295)
Q Consensus 253 l~~gad~~~~d~~g~TpL~~A~~~g~~~~~~~iv~~L 289 (295)
.+.|..++.... .+-+...+..|+....+++++-|
T Consensus 167 ~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 167 VESEVVPEEPEL--AALLKVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHHHHHH
Confidence 466777665432 23455556677743344444444
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=29.38 E-value=1.3e+02 Score=27.02 Aligned_cols=62 Identities=13% Similarity=0.022 Sum_probs=35.2
Q ss_pred HHHhcChHHHHHHHhcCCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHH
Q 022566 139 EVEQLLEPEEREILNQNATPNLGKISTAKWRPLQTLTLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKL 218 (295)
Q Consensus 139 ai~~~~~~~~~~lL~~g~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~ 218 (295)
.+.+++...+...+..|.+++-.. |.--. .|| ++.+ . -..|.|.+|+|++..+.+++..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~l------t~~e~-----------~ll-n~~~--a-f~~g~tlvhlair~~r~~~l~~ 87 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQL------TADEV-----------RLL-NRPS--A-FDVGYTLVHLAIRFQRQDMLAI 87 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCC------CHHHH-----------HHH-CCTT--T-CCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhccc------CHHHH-----------HHh-CCCc--c-cccCchhhhhhhhhhhhhHHHH
Confidence 446677788888888877775321 11111 111 1111 1 2346777777777777777776
Q ss_pred HHh
Q 022566 219 LIK 221 (295)
Q Consensus 219 Ll~ 221 (295)
|+.
T Consensus 88 ll~ 90 (454)
T 3zrh_A 88 LLT 90 (454)
T ss_dssp HHH
T ss_pred hhh
Confidence 665
No 118
>3lu9_C Proteinase-activated receptor 1; serine protease, acute phase, blood coagulation, calcium, CL PAIR of basic residues, disease mutation; HET: NAG; 1.80A {Homo sapiens}
Probab=25.73 E-value=21 Score=18.34 Aligned_cols=14 Identities=29% Similarity=0.698 Sum_probs=10.3
Q ss_pred ccccccccccccccc
Q 022566 3 NFVLKNSYLHGFSTF 17 (295)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (295)
.|.|+|+ -++|.+|
T Consensus 10 sF~lrn~-~d~FEp~ 23 (25)
T 3lu9_C 10 SFLLRNP-NDKYEPF 23 (26)
T ss_dssp CCCCCTT-TTCCCCC
T ss_pred eeEeeCC-ccccccc
Confidence 4778887 7888765
No 119
>2d46_A Calcium channel, voltage-dependent, beta 4 subunit isoform A; Ca2+ channel, BETA4A subunit, nuclear magnetic resonance, alternative spliving; NMR {Homo sapiens}
Probab=22.06 E-value=30 Score=21.79 Aligned_cols=12 Identities=42% Similarity=0.814 Sum_probs=8.6
Q ss_pred cccccccccccc
Q 022566 4 FVLKNSYLHGFS 15 (295)
Q Consensus 4 ~~~~~~~~~~~~ 15 (295)
+...|+|+|||.
T Consensus 3 ~m~~~~y~~g~~ 14 (61)
T 2d46_A 3 HMYDNLYLHGIE 14 (61)
T ss_dssp CGGGGGGCSSCC
T ss_pred ccccchhccccc
Confidence 345688888875
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.39 E-value=2.6e+02 Score=25.10 Aligned_cols=61 Identities=20% Similarity=0.262 Sum_probs=42.1
Q ss_pred HHcCCHHHHHHHHhCCCCCCccCCCCChHHHHHHHhCCHHHHHHHHhCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH
Q 022566 175 TLSMQIRYMDMLLDGGLDIDSVDKDGATPLHYAVQVGAMQSVKLLIKYNVDVNVADNEGWTPLHIAIQSRNRDIAKVLLI 254 (295)
Q Consensus 175 ~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~iv~~Ll~ 254 (295)
+..|+...|+..+..|.+++.+ -|+--.+.. .. .+ . -.-|.|-+|+|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~----lt~~e~~ll-----------n~-~~--a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQ----LTADEVRLL-----------NR-PS--A-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCC----CCHHHHHHH-----------CC-TT--T-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcc----cCHHHHHHh-----------CC-Cc--c-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 4578888888888888877643 233333222 21 11 1 3358999999999999999999986
Done!