Query 022567
Match_columns 295
No_of_seqs 203 out of 662
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 07:34:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022567.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022567hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a4f_A SurviVal of motor neuro 99.8 1.2E-19 4E-24 132.9 7.6 57 95-151 4-62 (64)
2 1mhn_A SurviVal motor neuron p 99.8 1.3E-19 4.6E-24 130.4 7.0 55 98-152 2-58 (59)
3 3s6w_A Tudor domain-containing 99.8 1.2E-19 4.3E-24 128.2 6.4 52 99-150 1-54 (54)
4 1g5v_A SurviVal motor neuron p 99.8 2.7E-19 9.1E-24 138.9 7.2 58 96-153 7-66 (88)
5 3pnw_C Tudor domain-containing 99.7 3.1E-18 1.1E-22 129.8 7.0 55 98-152 16-72 (77)
6 2d9t_A Tudor domain-containing 99.7 1E-17 3.4E-22 127.2 7.5 57 96-152 6-64 (78)
7 2equ_A PHD finger protein 20-l 99.7 1.4E-17 4.8E-22 125.2 7.6 55 96-152 6-61 (74)
8 2ldm_A Uncharacterized protein 99.4 1.4E-17 4.8E-22 126.8 0.0 53 98-152 5-58 (81)
9 3p8d_A Medulloblastoma antigen 99.6 2.6E-16 8.9E-21 115.7 6.7 52 99-152 6-58 (67)
10 3qii_A PHD finger protein 20; 99.6 3.1E-16 1.1E-20 120.0 6.6 55 96-152 18-73 (85)
11 3fdr_A Tudor and KH domain-con 99.6 1.5E-15 5.2E-20 118.5 8.2 55 98-152 26-81 (94)
12 2diq_A Tudor and KH domain-con 99.5 8.6E-15 3E-19 117.4 5.7 55 98-152 31-86 (110)
13 2eqk_A Tudor domain-containing 99.5 2.6E-14 8.9E-19 109.3 7.7 58 95-152 17-75 (85)
14 2l8d_A Lamin-B receptor; DNA b 99.5 8.6E-14 2.9E-18 100.3 7.0 55 96-151 6-62 (66)
15 2dig_A Lamin-B receptor; tudor 99.4 3E-13 1E-17 97.7 7.4 56 96-152 9-66 (68)
16 3ntk_A Maternal protein tudor; 99.3 1.5E-12 5.2E-17 111.7 7.6 53 98-152 46-99 (169)
17 4b9w_A TDRD1, tudor domain-con 99.3 1.6E-12 5.5E-17 114.2 7.9 55 98-152 64-119 (201)
18 4b9x_A TDRD1, tudor domain-con 99.3 2.5E-12 8.5E-17 115.1 7.5 55 98-152 64-119 (226)
19 2wac_A CG7008-PA; unknown func 99.3 7.3E-12 2.5E-16 110.2 7.4 55 98-152 50-104 (218)
20 2hqx_A P100 CO-activator tudor 99.2 1.2E-11 4.1E-16 111.4 7.1 54 98-152 64-118 (246)
21 3bdl_A Staphylococcal nuclease 99.0 3.5E-10 1.2E-14 113.7 7.1 54 98-152 410-464 (570)
22 2eqj_A Metal-response element- 98.9 5E-09 1.7E-13 76.1 8.3 52 96-150 10-64 (66)
23 4hcz_A PHD finger protein 1; p 98.7 3.1E-08 1.1E-12 69.9 6.7 50 99-150 3-54 (58)
24 2e5q_A PHD finger protein 19; 98.6 1E-07 3.5E-12 68.0 6.0 51 97-150 5-58 (63)
25 2e5p_A Protein PHF1, PHD finge 98.6 2.4E-07 8.1E-12 67.1 7.7 51 98-151 8-61 (68)
26 2xk0_A Polycomb protein PCL; t 98.5 4.2E-07 1.4E-11 66.2 8.0 52 98-151 14-65 (69)
27 2m0o_A PHD finger protein 1; t 98.4 4.9E-07 1.7E-11 67.1 6.5 52 97-150 24-77 (79)
28 1ssf_A Transformation related 98.3 7.8E-07 2.7E-11 74.6 5.4 48 100-148 9-57 (156)
29 2g3r_A Tumor suppressor P53-bi 98.3 1.2E-06 4.1E-11 70.7 5.9 47 101-148 6-53 (123)
30 2f5k_A MORF-related gene 15 is 98.0 9.8E-06 3.4E-10 64.0 6.2 53 97-151 20-78 (102)
31 1wgs_A MYST histone acetyltran 97.9 1.7E-05 5.7E-10 65.6 6.9 50 98-148 11-68 (133)
32 2eko_A Histone acetyltransfera 97.9 1.3E-05 4.3E-10 61.7 5.6 52 98-149 8-68 (87)
33 2lcc_A AT-rich interactive dom 97.9 1.2E-05 4.2E-10 60.2 5.2 53 98-150 4-64 (76)
34 2eqm_A PHD finger protein 20-l 97.9 3.5E-05 1.2E-09 59.3 7.9 55 96-151 16-76 (88)
35 2ro0_A Histone acetyltransfera 97.9 1.8E-05 6E-10 61.5 6.1 51 97-149 21-77 (92)
36 3h8z_A FragIle X mental retard 97.9 2.7E-05 9.1E-10 64.0 7.0 56 98-153 59-120 (128)
37 2rnz_A Histone acetyltransfera 97.8 3.3E-05 1.1E-09 60.1 5.5 51 97-149 23-79 (94)
38 2lrq_A Protein MRG15, NUA4 com 96.7 1E-05 3.4E-10 62.0 0.0 52 97-150 10-67 (85)
39 3sd4_A PHD finger protein 20; 97.5 0.00037 1.3E-08 50.9 7.7 55 95-150 8-68 (69)
40 3m9q_A Protein MALE-specific l 97.5 0.0002 6.9E-09 56.4 6.2 55 97-151 17-85 (101)
41 2bud_A Males-absent on the fir 97.4 0.0003 1E-08 54.4 5.8 48 102-150 17-73 (92)
42 2qqr_A JMJC domain-containing 97.2 0.00041 1.4E-08 56.0 5.6 51 99-150 5-56 (118)
43 2k3y_A Chromatin modification- 97.2 0.00037 1.3E-08 57.7 5.0 52 98-151 8-103 (136)
44 3m9p_A MALE-specific lethal 3 97.2 0.00045 1.5E-08 55.1 5.1 53 98-151 18-85 (110)
45 3ask_A E3 ubiquitin-protein li 96.9 0.00084 2.9E-08 60.0 5.0 53 99-151 2-67 (226)
46 3oa6_A MALE-specific lethal 3 96.8 0.0022 7.4E-08 51.2 6.3 56 96-151 16-85 (110)
47 3db3_A E3 ubiquitin-protein li 96.7 0.0036 1.2E-07 52.7 6.9 57 95-151 6-84 (161)
48 2xdp_A Lysine-specific demethy 96.6 0.0005 1.7E-08 55.9 1.4 52 98-150 5-57 (123)
49 3h8z_A FragIle X mental retard 96.5 0.0045 1.5E-07 50.6 6.2 50 103-153 5-55 (128)
50 3dlm_A Histone-lysine N-methyl 96.4 0.0042 1.4E-07 54.8 5.6 48 98-147 7-58 (213)
51 3e9g_A Chromatin modification- 96.2 0.032 1.1E-06 45.5 9.5 51 99-151 7-101 (130)
52 1ri0_A Hepatoma-derived growth 95.2 0.041 1.4E-06 43.6 6.4 55 96-151 16-77 (110)
53 3qby_A Hepatoma-derived growth 95.1 0.026 8.9E-07 43.4 4.8 53 98-151 4-63 (94)
54 3mea_A SAGA-associated factor 94.6 0.041 1.4E-06 47.4 5.3 41 97-137 114-157 (180)
55 2xdp_A Lysine-specific demethy 94.6 0.047 1.6E-06 44.3 5.2 51 98-150 63-114 (123)
56 2daq_A WHSC1L1 protein, isofor 94.6 0.065 2.2E-06 42.1 6.0 55 97-152 6-72 (110)
57 1wjq_A KIAA1798 protein; MBT d 94.5 0.074 2.5E-06 42.1 6.2 56 95-150 9-69 (107)
58 3dlm_A Histone-lysine N-methyl 94.3 0.067 2.3E-06 47.1 6.1 56 94-150 63-124 (213)
59 2fhd_A RAD9 homolog, DNA repai 94.3 0.08 2.7E-06 44.1 6.1 48 103-151 9-63 (153)
60 1khc_A DNA cytosine-5 methyltr 94.1 0.093 3.2E-06 43.6 6.2 55 96-151 8-70 (147)
61 4fu6_A PC4 and SFRS1-interacti 93.7 0.057 2E-06 45.0 4.2 55 96-151 19-80 (153)
62 2lcd_A AT-rich interactive dom 92.7 0.012 4.2E-07 47.0 0.0 52 97-150 54-106 (118)
63 2qqr_A JMJC domain-containing 93.4 0.12 4.2E-06 41.5 5.5 50 99-150 63-113 (118)
64 3llr_A DNA (cytosine-5)-methyl 93.1 0.11 3.8E-06 43.6 5.0 57 95-152 12-76 (154)
65 3mp6_A MBP, SGF29, maltose-bin 92.8 0.14 4.8E-06 49.9 6.2 55 96-150 454-512 (522)
66 2biv_A SCML2 protein, sex COMB 92.8 0.26 9E-06 44.2 7.4 55 96-150 168-227 (243)
67 2gfu_A DNA mismatch repair pro 92.7 0.16 5.5E-06 41.3 5.4 57 95-152 18-86 (134)
68 2l89_A PWWP domain-containing 92.6 0.17 5.8E-06 39.7 5.3 53 98-151 4-68 (108)
69 1h3z_A Hypothetical 62.8 kDa p 92.2 0.19 6.6E-06 39.3 5.1 55 97-152 4-72 (109)
70 3pfs_A Bromodomain and PHD fin 87.0 1.2 4.3E-05 37.3 6.3 55 97-152 34-121 (158)
71 2lcd_A AT-rich interactive dom 85.6 0.16 5.6E-06 40.5 0.0 49 98-148 5-54 (118)
72 2biv_A SCML2 protein, sex COMB 85.3 1.3 4.3E-05 39.7 5.8 55 96-150 59-118 (243)
73 2r58_A Polycomb protein SCM; M 84.0 2.2 7.6E-05 38.6 6.9 54 97-150 141-199 (265)
74 1wjr_A KIAA1617 protein; MBT d 82.6 1.5 5E-05 35.5 4.6 55 96-150 8-69 (127)
75 3db3_A E3 ubiquitin-protein li 82.0 1.4 4.7E-05 37.1 4.3 30 96-125 89-123 (161)
76 3l42_A Peregrin; transcription 81.1 2.1 7.2E-05 34.8 5.0 54 98-152 4-90 (130)
77 1fxk_C Protein (prefoldin); ar 80.6 18 0.00063 28.4 10.6 22 9-30 3-24 (133)
78 1oz2_A Lethal(3)malignant brai 80.5 3.1 0.00011 38.8 6.6 55 96-150 145-204 (331)
79 2r58_A Polycomb protein SCM; M 78.9 2.6 8.9E-05 38.2 5.4 55 96-150 31-90 (265)
80 3ask_A E3 ubiquitin-protein li 76.9 2.5 8.4E-05 37.5 4.5 32 96-127 72-108 (226)
81 2e6z_A Transcription elongatio 74.7 6.4 0.00022 27.2 5.3 52 96-148 4-57 (59)
82 1oz2_A Lethal(3)malignant brai 73.3 5.6 0.00019 37.0 6.2 55 96-150 249-308 (331)
83 3d0f_A Penicillin-binding 1 tr 72.5 3.7 0.00013 31.5 4.1 37 113-150 33-69 (106)
84 3pmi_A PWWP domain-containing 71.2 4.5 0.00015 32.7 4.3 53 98-151 3-62 (134)
85 3ut1_A Lethal(3)malignant brai 69.8 5.5 0.00019 37.0 5.3 54 97-150 141-199 (324)
86 3feo_A MBT domain-containing p 68.7 10 0.00034 36.7 7.0 55 96-150 359-418 (437)
87 3h6z_A Polycomb protein SFMBT; 66.0 11 0.00036 36.7 6.6 55 96-150 373-432 (447)
88 2jz2_A SSL0352 protein; SH3-li 65.8 18 0.00062 25.7 6.0 50 100-151 2-56 (66)
89 2zdi_C Prefoldin subunit alpha 65.5 34 0.0012 27.6 8.8 21 102-123 58-78 (151)
90 3f70_A Lethal(3)malignant brai 65.3 13 0.00043 36.2 7.0 55 96-150 363-422 (456)
91 3ut1_A Lethal(3)malignant brai 65.3 14 0.00047 34.3 7.0 55 96-150 244-303 (324)
92 3o48_A Mitochondria fission 1 59.8 10 0.00036 30.8 4.4 38 14-51 89-126 (134)
93 1y8m_A FIS1; mitochondria, unk 58.7 8.1 0.00028 31.9 3.7 37 14-50 88-124 (144)
94 2egv_A UPF0088 protein AQ_165; 57.3 11 0.00038 32.9 4.6 35 99-135 28-62 (229)
95 1i84_S Smooth muscle myosin he 56.6 17 0.00058 39.2 6.8 53 99-152 27-79 (1184)
96 1nzn_A CGI-135 protein, fissio 56.0 9.3 0.00032 30.6 3.5 38 14-51 85-122 (126)
97 3feo_A MBT domain-containing p 55.2 14 0.00049 35.6 5.3 54 97-150 252-314 (437)
98 1vhk_A Hypothetical protein YQ 55.0 19 0.00066 32.2 5.9 37 98-135 35-71 (268)
99 4e8b_A Ribosomal RNA small sub 54.6 20 0.00067 31.8 5.8 36 98-134 32-67 (251)
100 1z85_A Hypothetical protein TM 54.5 19 0.00064 31.7 5.6 36 98-134 39-74 (234)
101 1vhy_A Hypothetical protein HI 54.5 19 0.00064 32.1 5.7 37 98-135 34-70 (257)
102 4emc_A Monopolin complex subun 51.5 99 0.0034 26.4 9.4 18 44-61 65-82 (190)
103 2lw1_A ABC transporter ATP-bin 51.4 57 0.0019 24.0 7.1 48 9-57 24-76 (89)
104 3mea_A SAGA-associated factor 51.2 34 0.0012 29.1 6.5 58 95-152 40-104 (180)
105 3kw2_A Probable R-RNA methyltr 50.7 23 0.00078 31.5 5.6 36 99-135 32-67 (257)
106 1pc2_A Mitochondria fission pr 48.5 13 0.00045 30.7 3.4 37 14-50 82-118 (152)
107 1kk8_A Myosin heavy chain, str 47.8 34 0.0012 35.7 7.1 54 98-152 26-79 (837)
108 1nz9_A Transcription antitermi 47.3 40 0.0014 22.6 5.2 50 98-148 3-56 (58)
109 4fi5_A Nucleoprotein; structur 47.1 62 0.0021 25.4 6.8 56 5-61 20-82 (113)
110 3h6z_A Polycomb protein SFMBT; 46.3 25 0.00085 34.1 5.4 55 96-150 264-328 (447)
111 3f70_A Lethal(3)malignant brai 45.7 22 0.00076 34.5 5.0 51 100-150 259-318 (456)
112 3cgm_A SLYD, peptidyl-prolyl C 45.6 30 0.001 28.4 5.2 36 98-134 83-118 (158)
113 4db1_A Myosin-7; S1DC, cardiac 44.4 37 0.0012 35.2 6.7 53 98-152 29-81 (783)
114 1g2b_A Spectrin alpha chain; c 43.8 39 0.0013 22.5 4.8 27 95-121 35-61 (62)
115 1zme_C Proline utilization tra 43.1 24 0.00081 24.2 3.6 23 9-31 46-68 (70)
116 2bz8_A SH3-domain kinase bindi 42.8 43 0.0015 21.9 4.8 27 95-121 15-41 (58)
117 2kr7_A FKBP-type peptidyl-prol 41.6 42 0.0014 27.1 5.5 37 98-135 92-128 (151)
118 1jo8_A ABP1P, actin binding pr 41.2 47 0.0016 21.7 4.8 28 95-122 14-41 (58)
119 3t98_B Nucleoporin NUP58/NUP45 40.9 69 0.0024 24.2 6.1 24 9-32 14-37 (93)
120 3eg3_A Proto-oncogene tyrosine 40.3 48 0.0017 21.8 4.8 28 95-122 19-47 (63)
121 3p8b_B Transcription antitermi 40.0 40 0.0014 27.2 5.1 55 97-152 89-147 (152)
122 1v6z_A Hypothetical protein TT 39.8 39 0.0013 29.4 5.2 34 98-134 27-60 (228)
123 1tg0_A BBC1 protein, myosin ta 39.3 48 0.0016 22.5 4.8 29 95-123 21-49 (68)
124 2lj0_A Sorbin and SH3 domain-c 38.6 48 0.0016 22.9 4.6 28 95-122 20-47 (65)
125 2oaw_A Spectrin alpha chain, b 38.3 58 0.002 21.6 5.0 29 95-123 15-43 (65)
126 1y0m_A 1-phosphatidylinositol- 37.9 55 0.0019 21.6 4.8 28 95-122 17-44 (61)
127 2a26_A Calcyclin-binding prote 37.5 82 0.0028 21.1 5.4 37 6-47 3-44 (50)
128 2vwf_A Growth factor receptor- 37.4 58 0.002 21.1 4.8 27 95-121 16-42 (58)
129 1sem_A SEM-5; SRC-homology 3 ( 36.8 61 0.0021 21.0 4.8 28 95-122 16-43 (58)
130 1uti_A GRB2-related adaptor pr 36.8 60 0.0021 21.1 4.8 27 95-121 15-41 (58)
131 2ca5_A MXIH; transport protein 36.0 23 0.0008 26.5 2.7 38 11-48 18-56 (85)
132 4dnd_A Syntaxin-10, SYN10; str 35.9 70 0.0024 25.5 5.8 30 33-62 59-88 (130)
133 2eqs_A ATP-dependent RNA helic 35.8 50 0.0017 24.8 4.7 34 114-147 13-48 (103)
134 2ew3_A SH3-containing GRB2-lik 35.7 55 0.0019 22.5 4.6 27 95-121 17-43 (68)
135 1w70_A Neutrophil cytosol fact 35.6 58 0.002 21.4 4.6 28 95-122 18-45 (60)
136 1uj0_A Signal transducing adap 35.4 63 0.0022 21.4 4.8 28 95-122 19-46 (62)
137 3h0h_A Proto-oncogene tyrosine 35.4 61 0.0021 22.1 4.8 28 95-122 29-56 (73)
138 4dt4_A FKBP-type 16 kDa peptid 34.9 75 0.0026 26.4 6.1 35 98-133 111-145 (169)
139 2djq_A SH3 domain containing r 34.8 77 0.0026 21.3 5.2 27 95-121 21-47 (68)
140 3ngp_A Spectrin alpha chain, b 34.6 67 0.0023 21.0 4.8 27 95-121 20-46 (62)
141 1zuy_A Myosin-5 isoform; SH3 d 34.6 66 0.0022 20.8 4.7 28 95-122 15-42 (58)
142 2fpe_A C-JUN-amino-terminal ki 34.5 56 0.0019 21.6 4.4 27 95-121 17-43 (62)
143 2ycu_A Non muscle myosin 2C, a 34.3 50 0.0017 35.1 5.9 53 99-152 4-56 (995)
144 1cka_A C-CRK N-terminal SH3 do 34.3 64 0.0022 20.8 4.6 26 95-120 15-40 (57)
145 3ulr_B SRC substrate cortactin 34.0 68 0.0023 21.3 4.8 28 95-122 23-50 (65)
146 2ic9_A Nucleocapsid protein; h 33.9 1.3E+02 0.0046 22.8 6.7 39 8-46 6-51 (96)
147 3u5e_h 60S ribosomal protein L 33.8 1.7E+02 0.0058 23.1 7.6 51 5-55 10-60 (120)
148 1b07_A Protein (proto-oncogene 33.7 63 0.0022 21.9 4.6 26 95-120 17-42 (65)
149 1zlm_A Osteoclast stimulating 33.5 74 0.0025 20.7 4.8 27 95-121 17-43 (58)
150 2do3_A Transcription elongatio 33.4 94 0.0032 22.3 5.5 50 98-149 16-66 (69)
151 2k48_A Nucleoprotein; viral pr 32.9 1E+02 0.0036 23.9 6.0 52 9-61 37-95 (107)
152 3cqt_A P59-FYN, proto-oncogene 32.8 68 0.0023 22.7 4.8 28 95-122 19-46 (79)
153 1zx6_A YPR154WP; SH3 domain, p 32.7 70 0.0024 20.8 4.6 27 95-121 16-42 (58)
154 2g6f_X RHO guanine nucleotide 32.4 73 0.0025 20.8 4.6 27 95-121 18-44 (59)
155 2drm_A Acanthamoeba myosin IB; 32.2 81 0.0028 20.4 4.8 27 95-121 17-43 (58)
156 2ic6_A Nucleocapsid protein; h 32.2 1.2E+02 0.0042 22.2 6.0 52 9-61 7-65 (78)
157 1ue9_A Intersectin 2; beta bar 32.1 71 0.0024 22.3 4.8 48 95-151 21-68 (80)
158 1luz_A Protein K3, protein K2; 31.9 61 0.0021 23.7 4.5 35 113-148 11-47 (88)
159 2xmf_A Myosin 1E SH3; motor pr 31.9 74 0.0025 20.8 4.6 27 95-121 19-45 (60)
160 2yrv_A AT-rich interactive dom 31.8 48 0.0016 26.2 4.0 54 99-152 10-72 (117)
161 4f14_A Nebulette; SH3 domain, 31.7 72 0.0024 21.0 4.6 28 95-122 20-47 (64)
162 2d8j_A FYN-related kinase; SH3 31.4 67 0.0023 22.2 4.5 29 95-123 21-49 (77)
163 1x69_A Cortactin isoform A; SH 31.4 75 0.0026 22.2 4.8 27 95-121 31-57 (79)
164 1ux5_A BNI1 protein; structura 31.4 1.4E+02 0.0047 28.0 8.0 27 6-32 290-316 (411)
165 2rjz_A PILO protein; structura 31.3 72 0.0025 25.7 5.3 36 8-46 16-51 (147)
166 1gl5_A Tyrosine-protein kinase 31.3 72 0.0025 21.5 4.6 26 95-120 16-41 (67)
167 4esr_A Jouberin; AHI-1, AHI1, 31.1 72 0.0025 21.5 4.6 27 95-121 20-46 (69)
168 1wyx_A CRK-associated substrat 31.0 82 0.0028 21.3 4.9 27 95-121 17-46 (69)
169 4ga2_A E3 SUMO-protein ligase 30.9 24 0.00083 27.2 2.2 20 27-46 124-143 (150)
170 2k8i_A SLYD, peptidyl-prolyl C 30.7 58 0.002 27.0 4.7 34 98-133 88-121 (171)
171 2ak5_A RHO guanine nucleotide 30.7 86 0.0029 20.7 4.8 27 95-121 20-46 (64)
172 1ruw_A Myosin-3 isoform, MYO3; 30.5 79 0.0027 21.3 4.7 28 95-122 17-44 (69)
173 2fpf_A C-JUN-amino-terminal ki 30.5 69 0.0024 21.8 4.4 27 95-121 20-46 (71)
174 3c0c_A Endophilin-A2; endocyto 30.4 74 0.0025 21.9 4.6 27 95-121 27-53 (73)
175 1x2q_A Signal transducing adap 30.3 72 0.0024 22.9 4.6 28 95-122 31-58 (88)
176 1lrz_A FEMA, factor essential 29.8 1.5E+02 0.005 27.7 7.9 51 9-59 249-299 (426)
177 1f45_B Interleukin-12 alpha ch 29.6 82 0.0028 27.0 5.4 48 8-60 101-148 (197)
178 2dl4_A Protein STAC; SH3 domai 29.5 91 0.0031 21.0 4.9 27 95-121 21-47 (68)
179 2j6f_A CD2-associated protein; 29.5 84 0.0029 20.7 4.6 27 95-121 15-42 (62)
180 2ysq_A RHO guanine nucleotide 29.4 75 0.0026 22.3 4.6 28 95-122 24-51 (81)
181 1qp2_A Protein (PSAE protein); 29.3 41 0.0014 24.2 2.9 50 100-150 2-61 (70)
182 3qh9_A Liprin-beta-2; coiled-c 29.1 1E+02 0.0035 22.8 5.1 31 9-48 35-65 (81)
183 2xcb_A PCRH, regulatory protei 29.0 50 0.0017 24.8 3.7 23 16-38 65-87 (142)
184 2pqh_A Spectrin alpha chain, b 28.8 86 0.0029 22.0 4.8 27 95-121 16-42 (80)
185 1oot_A Hypothetical 40.4 kDa p 28.8 99 0.0034 20.1 4.8 27 95-121 17-45 (60)
186 3thk_A Spectrin alpha chain, b 28.8 90 0.0031 21.2 4.8 27 95-121 19-45 (73)
187 4glm_A Dynamin-binding protein 28.7 83 0.0028 21.2 4.6 28 95-122 27-54 (72)
188 2dl3_A Sorbin and SH3 domain-c 28.6 85 0.0029 21.0 4.6 27 95-121 21-47 (68)
189 2ckk_A KIN17; beta barrel, rib 28.5 29 0.001 27.7 2.3 52 99-151 13-70 (127)
190 2o9s_A Ponsin; SH3 domain, sig 28.4 68 0.0023 21.6 4.0 29 95-123 20-48 (67)
191 2dil_A Proline-serine-threonin 28.4 97 0.0033 20.9 4.9 28 95-122 22-49 (69)
192 1zuu_A BZZ1 protein; SH3 domai 28.3 89 0.0031 20.1 4.5 27 95-121 15-42 (58)
193 2ydl_A SH3 domain-containing k 28.1 96 0.0033 21.3 4.8 27 95-121 16-44 (69)
194 1x2k_A OSTF1, osteoclast stimu 28.1 98 0.0034 20.8 4.8 27 95-121 21-47 (68)
195 2jt4_A Cytoskeleton assembly c 27.8 1E+02 0.0035 20.8 4.9 28 95-122 20-48 (71)
196 2nwm_A Vinexin; cell adhesion; 27.8 87 0.003 21.2 4.5 27 95-121 15-41 (65)
197 3a98_A DOCK2, dedicator of cyt 27.7 57 0.002 27.1 4.2 26 95-121 31-56 (184)
198 2ed1_A 130 kDa phosphatidylino 27.7 60 0.0021 22.5 3.7 29 95-123 24-52 (76)
199 3mp6_A MBP, SGF29, maltose-bin 27.5 87 0.003 29.9 6.0 55 97-151 385-450 (522)
200 2jte_A CD2-associated protein; 27.4 1E+02 0.0036 20.3 4.8 27 95-121 20-48 (64)
201 1x2p_A Protein arginine N-meth 27.4 1E+02 0.0035 20.7 4.8 27 95-121 21-47 (68)
202 2yuo_A CIP85, RUN and TBC1 dom 27.4 97 0.0033 21.5 4.8 27 95-121 21-47 (78)
203 2gnc_A SLIT-ROBO RHO GTPase-ac 27.1 69 0.0023 21.1 3.8 28 95-122 20-47 (60)
204 4a17_U RPL35, 60S ribosomal pr 27.0 94 0.0032 24.8 5.0 50 6-55 12-64 (124)
205 3j21_W 50S ribosomal protein L 26.9 1.7E+02 0.0059 20.8 7.2 50 6-55 8-60 (72)
206 4ag1_C Fynomer; hydrolase-de n 26.2 93 0.0032 22.2 4.6 28 95-122 20-47 (84)
207 2zkr_v 60S ribosomal protein L 26.0 1.9E+02 0.0064 23.0 6.6 50 5-54 10-62 (123)
208 2xv5_A Lamin-A/C; structural p 25.9 1.8E+02 0.0063 20.8 6.4 46 12-57 3-56 (74)
209 2v1q_A SLA1, cytoskeleton asse 25.8 1.2E+02 0.0042 19.5 4.9 27 95-121 16-43 (60)
210 1csk_A C-SRC SH3 domain; phosp 25.8 1E+02 0.0035 20.9 4.6 26 95-120 25-51 (71)
211 1k4u_S Phagocyte NADPH oxidase 25.7 81 0.0028 20.8 3.9 27 95-121 19-45 (62)
212 3oym_A PFV integrase, P42IN; p 25.7 65 0.0022 29.2 4.5 54 98-152 318-377 (395)
213 1ssf_A Transformation related 25.6 69 0.0024 26.6 4.1 49 99-150 61-113 (156)
214 2k9g_A SH3 domain-containing k 25.5 1.1E+02 0.0039 20.8 4.8 27 95-121 23-51 (73)
215 2k52_A Uncharacterized protein 25.4 94 0.0032 21.9 4.4 35 113-148 5-39 (80)
216 1vq8_V 50S ribosomal protein L 25.3 1.8E+02 0.0063 20.6 7.5 48 6-53 11-61 (71)
217 2p4v_A Transcription elongatio 25.0 2.8E+02 0.0094 22.5 10.6 51 9-59 11-71 (158)
218 2ed0_A ABL interactor 2; coile 24.9 1E+02 0.0035 21.5 4.5 27 95-121 31-57 (78)
219 2a19_A EIF-2- alpha, eukaryoti 24.7 84 0.0029 26.1 4.6 36 113-148 15-51 (175)
220 2cre_A HEF-like protein; SH3 d 24.7 1.1E+02 0.0036 20.7 4.5 27 95-121 21-50 (71)
221 2eyx_A V-CRK sarcoma virus CT1 24.6 90 0.0031 21.0 4.1 27 96-122 23-49 (67)
222 2j05_A RAS GTPase-activating p 24.4 1.1E+02 0.0036 20.4 4.4 27 95-121 20-46 (65)
223 2dl8_A SLIT-ROBO RHO GTPase-ac 24.3 79 0.0027 21.7 3.7 27 95-121 23-49 (72)
224 1u5s_A Cytoplasmic protein NCK 24.1 1.1E+02 0.0038 20.6 4.5 26 95-120 20-47 (71)
225 1tuc_A Alpha-spectrin; capping 24.1 1.2E+02 0.004 20.2 4.6 26 96-121 4-29 (63)
226 1y71_A Kinase-associated prote 24.1 1.5E+02 0.005 23.9 5.6 32 99-132 7-38 (130)
227 2bzy_A CRK-like protein, CRKL 24.0 1E+02 0.0035 20.7 4.3 27 95-121 17-43 (67)
228 3uul_A Utrophin; spectrin repe 23.9 2.1E+02 0.0072 20.7 7.9 54 7-60 2-56 (118)
229 4e6r_A Cytoplasmic protein NCK 23.7 1E+02 0.0036 19.7 4.1 27 95-121 15-41 (58)
230 3u23_A CD2-associated protein; 23.6 86 0.0029 20.6 3.8 28 95-122 21-48 (65)
231 1neg_A Spectrin alpha chain, b 23.4 1.2E+02 0.0042 21.7 4.8 27 95-121 31-57 (83)
232 2ct3_A Vinexin; SH3 domian, st 23.4 84 0.0029 21.2 3.7 28 95-122 21-48 (70)
233 2cqo_A Nucleolar protein of 40 23.2 40 0.0014 26.2 2.1 35 113-147 22-56 (119)
234 2ecz_A Sorbin and SH3 domain-c 23.1 69 0.0024 21.7 3.2 29 95-123 21-49 (70)
235 4b3f_X DNA-binding protein smu 23.1 1.1E+02 0.0037 30.3 5.8 40 96-135 77-118 (646)
236 2dnu_A RUH-061, SH3 multiple d 23.0 92 0.0031 21.1 3.9 28 95-122 22-49 (71)
237 2ke9_A Caskin-2; SH3 domain, A 23.0 72 0.0025 22.9 3.4 28 95-122 33-60 (83)
238 2i0n_A Class VII unconventiona 23.0 96 0.0033 21.8 4.1 28 95-122 24-52 (80)
239 2cub_A Cytoplasmic protein NCK 22.8 1.1E+02 0.0036 22.0 4.4 27 95-121 31-57 (88)
240 1use_A VAsp, vasodilator-stimu 22.8 54 0.0019 21.6 2.4 15 37-51 22-36 (45)
241 2a28_A BZZ1 protein; SH3 domai 22.5 1.5E+02 0.0053 18.7 4.8 27 95-121 14-41 (54)
242 2dbm_A SH3-containing GRB2-lik 22.5 79 0.0027 21.7 3.5 27 95-121 21-47 (73)
243 1wx6_A Cytoplasmic protein NCK 22.5 1.3E+02 0.0046 21.4 4.9 26 95-120 31-58 (91)
244 2eqi_A Phospholipase C, gamma 22.4 59 0.002 22.0 2.7 28 95-122 21-48 (69)
245 2er8_A Regulatory protein Leu3 22.4 35 0.0012 23.6 1.5 19 9-27 51-69 (72)
246 2l0a_A STAM-1, signal transduc 22.3 71 0.0024 22.3 3.2 28 95-122 31-58 (72)
247 2lcs_A NAP1-binding protein 2; 22.2 1E+02 0.0034 21.4 4.0 44 95-150 19-62 (73)
248 1gcq_C VAV proto-oncogene; SH3 22.1 1.1E+02 0.0038 20.6 4.2 27 96-122 25-52 (70)
249 2yun_A Nostrin; nitric oxide s 22.1 1.1E+02 0.0037 21.3 4.2 27 95-121 21-47 (79)
250 3zua_A CLD, alpha-hemolysin tr 22.1 46 0.0016 25.9 2.4 45 102-149 75-121 (142)
251 2ct4_A CDC42-interacting prote 21.9 1.3E+02 0.0046 20.2 4.6 28 95-122 21-49 (70)
252 2ebp_A SAM and SH3 domain-cont 21.6 97 0.0033 21.4 3.8 27 95-121 25-51 (73)
253 2cuc_A SH3 domain containing r 21.4 88 0.003 21.1 3.5 26 95-120 21-46 (70)
254 2ega_A SH3 and PX domain-conta 21.3 1.1E+02 0.0036 20.7 3.9 27 95-121 22-48 (70)
255 1kl9_A Eukaryotic translation 21.3 92 0.0031 26.1 4.2 35 113-147 15-50 (182)
256 2jvv_A Transcription antitermi 21.0 2.3E+02 0.0079 23.1 6.7 49 97-148 125-179 (181)
257 3u8p_A Cytochrome B562 integra 21.0 1.9E+02 0.0066 26.8 6.5 56 6-61 63-123 (347)
258 1jwi_B Platelet aggregation in 21.0 1.3E+02 0.0044 22.2 4.7 26 95-120 87-112 (125)
259 2yuq_A Tyrosine-protein kinase 20.9 1.1E+02 0.0038 21.6 4.1 27 95-121 33-59 (85)
260 2vgx_A Chaperone SYCD; alterna 20.8 92 0.0032 23.8 3.9 25 15-39 67-91 (148)
261 2kc7_A BFR218_protein; tetratr 20.7 1.7E+02 0.0057 19.7 5.0 23 16-38 13-35 (99)
262 2yt6_A Adult MALE urinary blad 20.6 1.4E+02 0.0049 21.9 4.9 45 95-151 41-85 (109)
263 1ib8_A Conserved protein SP14. 20.3 2.1E+02 0.0071 23.4 6.1 49 101-149 102-155 (164)
264 3reb_B Tyrosine-protein kinase 20.1 1.5E+02 0.0051 21.1 4.7 26 95-121 17-42 (90)
265 2da9_A SH3-domain kinase bindi 20.1 1.4E+02 0.0047 20.1 4.3 27 95-121 21-49 (70)
266 1x6g_A Megakaryocyte-associate 20.1 1.7E+02 0.0059 20.4 5.0 27 95-121 31-58 (81)
267 2dl7_A KIAA0769 protein; SH3 d 20.1 1.5E+02 0.005 20.2 4.5 27 95-121 22-51 (73)
268 2ekh_A SH3 and PX domain-conta 20.1 1.5E+02 0.0053 20.6 4.7 43 95-151 22-64 (80)
269 3obv_E Protein diaphanous homo 20.0 3.2E+02 0.011 26.0 8.3 28 6-33 280-307 (457)
270 2egc_A SH3 and PX domain-conta 20.0 1E+02 0.0035 21.3 3.6 28 95-122 23-50 (75)
No 1
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=99.79 E-value=1.2e-19 Score=132.86 Aligned_cols=57 Identities=40% Similarity=0.654 Sum_probs=52.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC-Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITP-NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~-~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
++...|++||.|+|+||.||+||||+|++|+. ++ |.|.|++|||+|+|++++|||++
T Consensus 4 ~~~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~~Lrpl~ 62 (64)
T 4a4f_A 4 QPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVE 62 (64)
T ss_dssp CCSSCCCTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGEECCS
T ss_pred CcCCCCCCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHHHcEeCC
Confidence 45567999999999999999999999999996 45 99999999999999999999985
No 2
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=99.79 E-value=1.3e-19 Score=130.42 Aligned_cols=55 Identities=35% Similarity=0.511 Sum_probs=50.9
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeC-Cc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITP-NG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~-~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+||.||.||||+|.++++ ++ |.|.|+||||+|+|++++|||+++
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPIC 58 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGCBCTTC
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHHeeCCCC
Confidence 46999999999999999999999999986 35 999999999999999999999853
No 3
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=99.79 E-value=1.2e-19 Score=128.25 Aligned_cols=52 Identities=33% Similarity=0.529 Sum_probs=47.4
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCcccC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.|++|+.|+|+||.||.||||+|.++..+ + |.|.|+||||+|+|++++|||+
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~lrpi 54 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPI 54 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGGGEECC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHHHEEEC
Confidence 49999999999999999999999999854 4 9999999999999999999996
No 4
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.78 E-value=2.7e-19 Score=138.87 Aligned_cols=58 Identities=33% Similarity=0.468 Sum_probs=51.1
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCcccCCch
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRPVNLL 153 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp~~~~ 153 (295)
+...|++||.|+|+|+.||.||||+|++|..+ + |.|.|+||||+|+|++++|||++..
T Consensus 7 ~~~~~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 7 SLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICE 66 (88)
T ss_dssp --CCCCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGGCBCCC--
T ss_pred ccCCCCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHHcccCChh
Confidence 44579999999999999999999999999963 5 9999999999999999999999653
No 5
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=99.73 E-value=3.1e-18 Score=129.77 Aligned_cols=55 Identities=31% Similarity=0.504 Sum_probs=50.1
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+||.||.||||+|++|..+ + |.|.|+||||+++|++++|||++.
T Consensus 16 ~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 16 KMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQT 72 (77)
T ss_dssp TTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEGGGEECC--
T ss_pred CCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHHHeEECCh
Confidence 469999999999999999999999999854 4 999999999999999999999964
No 6
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=99.72 E-value=1e-17 Score=127.24 Aligned_cols=57 Identities=32% Similarity=0.505 Sum_probs=52.1
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC-Cc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP-NG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~-~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
+...|++|+.|+|+|+.||.||||+|++|.. ++ |.|.|+||||+++|++++|||++.
T Consensus 6 ~~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~~Lr~l~~ 64 (78)
T 2d9t_A 6 SGKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSNIKPVQT 64 (78)
T ss_dssp CCCCCCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred CccCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHHHeEeCCH
Confidence 3457999999999999999999999999986 35 999999999999999999999964
No 7
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=125.15 Aligned_cols=55 Identities=22% Similarity=0.343 Sum_probs=51.1
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
....|++||.|+|+|+ ||.||+|+|++|++++ |.|.|++| |.++|+.++|||++.
T Consensus 6 ~~~~~kvGd~clA~ws-Dg~~Y~A~I~~v~~~~~~~V~f~Dy-n~e~v~~~~lrplp~ 61 (74)
T 2equ_A 6 SGFDFKAGEEVLARWT-DCRYYPAKIEAINKEGTFTVQFYDG-VIRCLKRMHIKAMPE 61 (74)
T ss_dssp SCCCCCTTCEEEEECS-SSSEEEEEEEEESTTSSEEEEETTS-CEEEECGGGEECCCG
T ss_pred CCCCCCCCCEEEEECC-CCCEEEEEEEEECCCCEEEEEEecC-CeEEecHHHCeeCCh
Confidence 3467999999999999 9999999999999767 99999999 999999999999964
No 8
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=99.45 E-value=1.4e-17 Score=126.82 Aligned_cols=53 Identities=25% Similarity=0.495 Sum_probs=49.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++||.|+|+|+ ||.||||+|++|+.++ |.|.|++ ||+|+|++++|+|++.
T Consensus 5 ~~~kvGd~clAkws-Dg~wY~A~I~~v~~~~~y~V~F~D-Gn~E~V~~s~LrPl~~ 58 (81)
T 2ldm_A 5 SEFQINEQVLASWS-DSRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSK 58 (81)
Confidence 46999999999999 9999999999998766 9999999 9999999999999964
No 9
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=99.64 E-value=2.6e-16 Score=115.70 Aligned_cols=52 Identities=23% Similarity=0.481 Sum_probs=49.1
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
.|++||.|||+| .||.||+|+|++|++++ |+|+|.+ |++++|...+|+|++.
T Consensus 6 ~~~vGd~vmArW-~D~~yYpA~I~si~~~~~Y~V~F~d-G~~etvk~~~ikp~~~ 58 (67)
T 3p8d_A 6 EFQINEQVLACW-SDCRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSK 58 (67)
T ss_dssp CCCTTCEEEEEC-TTSCEEEEEEEEECTTSEEEEEETT-SCEEEEEGGGEEECC-
T ss_pred ccccCCEEEEEc-CCCCEeeEEEEEECCCCeEEEEEeC-CceEEEeHHHcccCCc
Confidence 699999999999 79999999999999888 9999999 9999999999999965
No 10
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=99.63 E-value=3.1e-16 Score=119.95 Aligned_cols=55 Identities=22% Similarity=0.460 Sum_probs=49.5
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
....|++||.|||+| .||.||+|+|++|++++ |+|+|.| |++++|...+|+|++.
T Consensus 18 ~~~~f~vGd~VlArW-~D~~yYPAkI~sV~~~~~YtV~F~D-G~~etvk~~~IKp~~~ 73 (85)
T 3qii_A 18 GSSEFQINEQVLACW-SDCRFYPAKVTAVNKDGTYTVKFYD-GVVQTVKHIHVKAFSK 73 (85)
T ss_dssp ---CCCTTCEEEEEC-TTSCEEEEEEEEECTTSEEEEEETT-SCEEEEEGGGEEECC-
T ss_pred CCcccccCCEEEEEe-CCCCEeeEEEEEECCCCeEEEEEeC-CCeEEecHHHcccCCh
Confidence 456799999999999 79999999999999988 9999999 9999999999999965
No 11
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=99.60 E-value=1.5e-15 Score=118.46 Aligned_cols=55 Identities=22% Similarity=0.440 Sum_probs=51.6
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+|+.||.||||+|.++.+++ |.|.|+||||+++|++++||+++.
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~~~~~~~V~fvDyGn~e~v~~~~lr~l~~ 81 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRS 81 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETTTCCEEEECGGGCEECCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEcCCCeEEEEHHHhhhcCH
Confidence 4689999999999999999999999998776 999999999999999999999964
No 12
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.52 E-value=8.6e-15 Score=117.40 Aligned_cols=55 Identities=22% Similarity=0.440 Sum_probs=51.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+|+.||.||||+|.++.+++ |.|.|+||||+++|++++||+++.
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~~~~~~~V~fvDyGn~e~v~~~~Lr~l~~ 86 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRS 86 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCCSSSCEEEEETTTCCEEEECGGGCEECCH
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEeCCCeEEEehHHhhcCcH
Confidence 4589999999999999999999999998756 999999999999999999999964
No 13
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=2.6e-14 Score=109.32 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=53.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
+.+..|++|+.|.|+|+.|+.||||+|.++..++ +.|.|+||||+++|+.+.|||+++
T Consensus 17 ~~~~~~k~g~~vaak~~d~n~WyRakV~~v~~~~~veVl~~DyGn~~~V~~~~LR~L~~ 75 (85)
T 2eqk_A 17 WEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEE 75 (85)
T ss_dssp CCCCCCCSSCEEEEECSSSCCEEEEEEEEECSSSEEEEECTTTCCEEEEETTTEEECCH
T ss_pred CcccCccCCCEEEEEeCCCCeEEEEEEEEecCCCeEEEEEEccCCEEEEEccccccCCH
Confidence 3467899999999999989999999999999877 999999999999999999999964
No 14
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=99.47 E-value=8.6e-14 Score=100.32 Aligned_cols=55 Identities=18% Similarity=0.341 Sum_probs=50.3
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCcccCC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
+...|.+||.|||+|++|+.||+|+|++|+.. . |.|.|.+ |++++|+..||||++
T Consensus 6 p~~~~~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKd-gT~e~L~~kDIkp~~ 62 (66)
T 2l8d_A 6 PNRKYADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKD-GTELALKESDIRLQS 62 (66)
T ss_dssp SSSSSCSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGGGEECSS
T ss_pred CceEeecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecC-CCEEeechhccccch
Confidence 34679999999999999999999999999954 4 9999999 999999999999983
No 15
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=99.43 E-value=3e-13 Score=97.72 Aligned_cols=56 Identities=20% Similarity=0.358 Sum_probs=50.9
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
+...|.+||.|||+|-+|+.||+|+|++|+.. . |.|.|.+ |++++|+..||||++.
T Consensus 9 p~~~f~vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKd-gT~e~L~~kDIKp~~~ 66 (68)
T 2dig_A 9 PSRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKD-GTELELKENDIKSGPS 66 (68)
T ss_dssp CCCSSCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTT-SCEEEEETTTEECCCC
T ss_pred CceEeecCCEEEEEccCCccceEEEEEEeccCCceEEEEecC-CCEEEechhccccCCC
Confidence 34679999999999999999999999999954 4 9999999 9999999999999853
No 16
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=99.34 E-value=1.5e-12 Score=111.69 Aligned_cols=53 Identities=25% Similarity=0.399 Sum_probs=48.7
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+|+.||.||||+|.++.+++ +.|.|+||||++.+ ++||+++.
T Consensus 46 ~~~~~G~~c~A~~~~d~~wyRa~I~~~~~~~~~~V~fvDyGn~~~v--~~lr~l~~ 99 (169)
T 3ntk_A 46 SDLKEGALCVAQFPEDEVFYRAQIRKVLDDGKCEVHFIDFGNNAVT--QQFRQLPE 99 (169)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECSTTCEEEEETTTTEEEEE--SCEECCCH
T ss_pred CCCCCCCEEEEEECCCCcEEEEEEEEECCCCEEEEEEEecCCeEEh--hhhhccCH
Confidence 3689999999999999999999999999877 99999999999884 89999964
No 17
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=99.34 E-value=1.6e-12 Score=114.25 Aligned_cols=55 Identities=33% Similarity=0.598 Sum_probs=51.0
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..+++|+.|+|+|+.||.||||+|.++.+++ +.|.|+||||+++|+.++||+++.
T Consensus 64 ~~~~~G~~c~a~~~~d~~wyRa~V~~~~~~~~~~V~~vDyG~~~~v~~~~l~~l~~ 119 (201)
T 4b9w_A 64 FKAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILP 119 (201)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETTTCCEEEECGGGEEECCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEccCCEEEEEHHHhccChH
Confidence 3478999999999999999999999998777 999999999999999999999964
No 18
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=99.31 E-value=2.5e-12 Score=115.06 Aligned_cols=55 Identities=33% Similarity=0.598 Sum_probs=51.0
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..+++|+.|+|+|+.||.||||+|.++.+++ +.|.|+||||+++|+.++||+++.
T Consensus 64 ~~~~~G~~c~a~~~~d~~WyRa~V~~~~~~~~~~V~~vDyGn~~~v~~~~l~~l~~ 119 (226)
T 4b9x_A 64 FKAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDYGNVEEVTTDQLQAILP 119 (226)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECSSSEEEEECTTTCCEEEEEGGGEECCCG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEecCCEEEEEHHHhccChH
Confidence 3478999999999999999999999998777 999999999999999999999964
No 19
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=99.26 E-value=7.3e-12 Score=110.17 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=51.0
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+|++||.||||+|+++.++.+.|.|+||||+++|+.++||+++.
T Consensus 50 ~~~~~g~~c~a~~~~d~~wyRa~V~~v~~~~~~V~~vDyG~~~~v~~~~l~~l~~ 104 (218)
T 2wac_A 50 YTPKRGDLVAAQFTLDNQWYRAKVERVQGSNATVLYIDYGNKETLPTNRLAALPP 104 (218)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEETTEEEEEETTTCCEEEEEGGGEEECCG
T ss_pred ccCCcCCEEEEEECCCCeEEEEEEEEecCCeEEEEEEecCCeEEEchHHcccCCh
Confidence 4589999999999999999999999998855999999999999999999999864
No 20
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=99.22 E-value=1.2e-11 Score=111.41 Aligned_cols=54 Identities=26% Similarity=0.443 Sum_probs=49.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|++|+.|+|+|+ ||.||||+|+++..++ |.|.|+||||++.|++++||+++.
T Consensus 64 ~~~~~G~~c~a~~~-d~~wyRa~V~~~~~~~~~~V~~vDyGn~~~v~~~~lr~l~~ 118 (246)
T 2hqx_A 64 YAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSP 118 (246)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEETTEEEEEETTTCCEEEECGGGEECCCG
T ss_pred CCCCCCCEEEEEcC-CCCEEEEEEEEEcCCCeEEEEEEeCCCeEEEeHHHhhcCCH
Confidence 46899999999999 9999999999998545 999999999999999999999964
No 21
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=99.00 E-value=3.5e-10 Score=113.70 Aligned_cols=54 Identities=26% Similarity=0.443 Sum_probs=50.4
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..+++|+.|+|+|+ ||.||||+|.++...+ |.|.|+||||+++|++++||+++.
T Consensus 410 ~~~~~G~~c~a~~~-d~~wyRa~I~~v~~~~~~~V~fvDyGn~e~v~~~~Lr~l~~ 464 (570)
T 3bdl_A 410 YAPRRGEFCIAKFV-DGEWYRARVEKVESPAKIHVFYIDYGNREVLPSTRLGTLSP 464 (570)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEETTEEEEEETTTCCEEEECGGGEECCCG
T ss_pred cCCCcCCEEEEEEC-CCCEEEEEEEEEcCCCeEEEEEEeCCCeEEEEHHHCccCCH
Confidence 56899999999999 9999999999998755 999999999999999999999964
No 22
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=98.91 E-value=5e-09 Score=76.11 Aligned_cols=52 Identities=23% Similarity=0.251 Sum_probs=44.1
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCE-EEEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNK-EEVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~-e~V~~~~lrp~ 150 (295)
....|++|+.|+|+|+ ||.+|+|+|.+|+.+ + |.|+| |+++ -.|...+|.+.
T Consensus 10 ~~~~f~vGddVLA~wt-DGl~Y~gtI~~V~~~~gtC~V~F--~D~s~~w~~~kdi~~~ 64 (66)
T 2eqj_A 10 PACKFEEGQDVLARWS-DGLFYLGTIKKINILKQSCFIIF--EDSSKSWVLWKDIQTG 64 (66)
T ss_dssp CCCCSCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEE--TTTEEEEEETTTEECC
T ss_pred ccccccCCCEEEEEEc-cCcEEEeEEEEEccCCcEEEEEE--ccCCEEEEEeeccccc
Confidence 4457999999999996 999999999999975 6 99999 5565 57888888764
No 23
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=98.71 E-value=3.1e-08 Score=69.90 Aligned_cols=50 Identities=24% Similarity=0.345 Sum_probs=42.8
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCc--eEEEEecCCCEEEEcCCCcccC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.+.+|+.|+|+|+ ||.||.++|.+|+..+ |.|.|.| +....|.+.+|.+.
T Consensus 3 ~f~~GedVLarws-DG~fYlGtI~~V~~~~~~clV~F~D-~s~~W~~~kdi~~~ 54 (58)
T 4hcz_A 3 RLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWKDISPA 54 (58)
T ss_dssp SCCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGGGEEEC
T ss_pred ccccCCEEEEEec-CCCEEeEEEEEEecCCCEEEEEEcC-CCeEEEEhHHcccc
Confidence 5889999999998 9999999999999654 9999965 33468999999875
No 24
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=1e-07 Score=68.01 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=43.6
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc--eEEEEecCCCE-EEEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGNK-EEVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn~-e~V~~~~lrp~ 150 (295)
...|.+|+.|+|+|+ ||.||.++|..|+... |.|.|. +|+ -.|.+.+|.++
T Consensus 5 ~~~f~eGqdVLarWs-DGlfYlgtV~kV~~~~~~ClV~Fe--D~s~~wv~~kdi~~~ 58 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWT-DGLYYLGKIKRVSSSKQSCLVTFE--DNSKYWVLWKDIQHA 58 (63)
T ss_dssp CCCCCTTCEEEEECT-TSCEEEEEECCCCSTTSEEEEEET--TSCEEEEEGGGEECC
T ss_pred ccceecCCEEEEEec-CCCEEEEEEEEEecCCCEEEEEEc--cCceeEEEeeccccc
Confidence 456999999999998 9999999999999653 999995 454 58889999876
No 25
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=2.4e-07 Score=67.08 Aligned_cols=51 Identities=24% Similarity=0.283 Sum_probs=44.1
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc--eEEEEecCCCE-EEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGNK-EEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn~-e~V~~~~lrp~~ 151 (295)
..|.+|+.|+|+|+ ||.||.++|..|+... |.|.| ++|+ -.|...+|.++.
T Consensus 8 ~~f~eGqdVLarWs-DGlfYlGtV~kV~~~~~~ClV~F--eD~s~~wv~~kdi~~~~ 61 (68)
T 2e5p_A 8 PRLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQF--EDDSQFLVLWKDISPAA 61 (68)
T ss_dssp CCCCTTCEEEEECT-TSSEEEEEEEEEETTTTEEEEEE--TTTEEEEEETTTEECCC
T ss_pred cccccCCEEEEEec-CCcEEEeEEEEEecCCcEEEEEE--ccCCeeeeeeecccccc
Confidence 46899999999998 9999999999999654 99999 4555 589999999873
No 26
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=98.51 E-value=4.2e-07 Score=66.23 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=44.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
..|..|+.|+|+|+ ||.||-++|.......|.|.|.| .....|.+.+|+-+.
T Consensus 14 ~~~~~geDVL~rw~-DG~fYLGtIVd~~~~~ClV~FeD-~S~~Wv~~kdi~kl~ 65 (69)
T 2xk0_A 14 VTYALQEDVFIKCN-DGRFYLGTIIDQTSDQYLIRFDD-QSEQWCEPDKLRKLG 65 (69)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEECSSCEEEEETT-CCEEEECTTTEECSS
T ss_pred cccccCCeEEEEec-CCCEEEEEEEecCCceEEEEecC-CcceeeeHHHHHhhc
Confidence 78999999999997 99999999977655559999987 334689999999874
No 27
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=98.41 E-value=4.9e-07 Score=67.14 Aligned_cols=52 Identities=23% Similarity=0.338 Sum_probs=43.6
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc--eEEEEecCCCEEEEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
...|..|+.|+|+|+ ||.||.++|..|+..+ |.|.|.| +..-.|.+.+|.+.
T Consensus 24 ~~~f~eGeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D-~S~~W~~~kdi~~~ 77 (79)
T 2m0o_A 24 RPRLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWKDISPA 77 (79)
T ss_dssp CCCCCTTCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETT-SCEEEEETTTBCCC
T ss_pred cceeccCCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcC-CCeEEEEeeccccc
Confidence 367999999999998 9999999999999654 9999965 33468888888763
No 28
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=98.27 E-value=7.8e-07 Score=74.58 Aligned_cols=48 Identities=27% Similarity=0.432 Sum_probs=40.7
Q ss_pred CCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcc
Q 022567 100 LAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVR 148 (295)
Q Consensus 100 ~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lr 148 (295)
-.+|.+|+|+||.|+-||+++|.....++ |.|.|+| |..-+|...+|.
T Consensus 9 ~~iG~rVfArWsd~~yyYpG~V~~~~~~~~Y~V~FdD-G~~k~v~~~div 57 (156)
T 1ssf_A 9 SFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDD-GYECDVLGKDIL 57 (156)
T ss_dssp CSTTCEEEECSSCSSEEEEEEEEECCTTTEEEEECTT-SCEEEEETTTEE
T ss_pred chhccEEEEEcCCCCcccccEEEEeccCCEEEEEEcC-CCeeEeeccceE
Confidence 48999999999988889999999988887 9999987 555677766665
No 29
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=98.26 E-value=1.2e-06 Score=70.69 Aligned_cols=47 Identities=26% Similarity=0.362 Sum_probs=38.6
Q ss_pred CCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcc
Q 022567 101 AVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVR 148 (295)
Q Consensus 101 kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lr 148 (295)
.+|-+|+|+||.|+.||+++|.....++ |.|.|+|-. .-+|...+|-
T Consensus 6 ~~G~rV~AkWsdn~~yYpG~V~~~~~~~ky~V~FdDg~-~~~v~~k~ii 53 (123)
T 2g3r_A 6 FVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDDGY-ECDVLGKDIL 53 (123)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEEEETTEEEEEETTSC-EEEEEGGGEE
T ss_pred ccceEEEEEeccCCcCcccEEEEeccCCeEEEEEcCCC-eeEeecceEE
Confidence 5799999999988899999999877777 999998743 3456667776
No 30
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=97.99 E-value=9.8e-06 Score=64.04 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=45.8
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEe--CCc--eEEEEecCCCE--EEEcCCCcccCC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAIT--PNG--YYVTYDSWGNK--EEVDPANVRPVN 151 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~--~~~--~~V~F~~Ygn~--e~V~~~~lrp~~ 151 (295)
...|.+|+.|++.+ +|.||+|.|.+|. +.. |.|.|.||+.+ |.|+.+.|++.+
T Consensus 20 ~~~f~vGekVl~~~--~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t 78 (102)
T 2f5k_A 20 KPKFQEGERVLCFH--GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYV 78 (102)
T ss_dssp SCSCCTTCEEEEES--SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESS
T ss_pred CcccCCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCC
Confidence 34699999999987 7999999999988 222 99999999987 999999998764
No 31
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=97.94 E-value=1.7e-05 Score=65.59 Aligned_cols=50 Identities=20% Similarity=0.375 Sum_probs=44.0
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeC----Cc--eEEEEecCCCE--EEEcCCCcc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITP----NG--YYVTYDSWGNK--EEVDPANVR 148 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~----~~--~~V~F~~Ygn~--e~V~~~~lr 148 (295)
..|.+|+.|++.|. ||.||+|.|..|.. .. |.|.|.||+.+ |.|+.+.|.
T Consensus 11 ~~~~vGe~v~~~~~-d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~ 68 (133)
T 1wgs_A 11 VTVEIGETYLCRRP-DSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLA 68 (133)
T ss_dssp CCCCTTSEEEEEET-TTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSC
T ss_pred cccCCCCEEEEEeC-CCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhcc
Confidence 45899999999996 99999999999872 22 99999999987 999999996
No 32
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.93 E-value=1.3e-05 Score=61.68 Aligned_cols=52 Identities=19% Similarity=0.367 Sum_probs=45.2
Q ss_pred CCCCCCCeEEEEEc---CCCcEEEEEEeeEeCC---c-eEEEEecCCCE--EEEcCCCccc
Q 022567 98 EKLAVGTKVQAVYS---EDGEWYDATIEAITPN---G-YYVTYDSWGNK--EEVDPANVRP 149 (295)
Q Consensus 98 ~~~kvGd~C~A~~s---~Dg~wY~A~I~~i~~~---~-~~V~F~~Ygn~--e~V~~~~lrp 149 (295)
..+.+|++|+|.+. .++.||+|.|.+|... . |.|.|.+|+.+ |.|+.++|..
T Consensus 8 ~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~ 68 (87)
T 2eko_A 8 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDL 68 (87)
T ss_dssp CSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCG
T ss_pred ccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHccc
Confidence 45899999999984 5899999999999842 2 99999999987 8999999963
No 33
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=97.92 E-value=1.2e-05 Score=60.22 Aligned_cols=53 Identities=28% Similarity=0.438 Sum_probs=44.7
Q ss_pred CCCCCCCeEEEEEc--CCCcEEEEEEeeEeC--Cc--eEEEEecCCCE--EEEcCCCcccC
Q 022567 98 EKLAVGTKVQAVYS--EDGEWYDATIEAITP--NG--YYVTYDSWGNK--EEVDPANVRPV 150 (295)
Q Consensus 98 ~~~kvGd~C~A~~s--~Dg~wY~A~I~~i~~--~~--~~V~F~~Ygn~--e~V~~~~lrp~ 150 (295)
..+.+|++|++.+. .+|.||+|.|.+|.. .. |.|.|.||+.+ |.|+.+.|...
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~ 64 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWP 64 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECS
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhcccc
Confidence 35899999999996 237999999999983 22 99999999987 89999999764
No 34
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=97.92 E-value=3.5e-05 Score=59.28 Aligned_cols=55 Identities=24% Similarity=0.533 Sum_probs=46.7
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCE--EEEcCC--CcccCC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNK--EEVDPA--NVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~--e~V~~~--~lrp~~ 151 (295)
....|++|+++.|+-. .|.||.|+|+.+.-. . |.|.|+||++. +.|+.+ +|+|+.
T Consensus 16 ~~~~F~vGmkLEA~D~-~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g 76 (88)
T 2eqm_A 16 PGITFEIGARLEALDY-LQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLE 76 (88)
T ss_dssp SSCCCCSSCEEEEECT-TSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCC
T ss_pred CcCcCCCCCEEEEEcC-CCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccc
Confidence 4567999999999964 689999999998843 3 99999999986 788887 899873
No 35
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=97.91 E-value=1.8e-05 Score=61.48 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=44.2
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeC--C-c-eEEEEecCCCE--EEEcCCCccc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITP--N-G-YYVTYDSWGNK--EEVDPANVRP 149 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~--~-~-~~V~F~~Ygn~--e~V~~~~lrp 149 (295)
...+.+|++|+|.+ ||.||+|.|.+|.. + . |.|.|.||+.+ |.|+.++|.-
T Consensus 21 ~~~~~vG~kv~v~~--~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l 77 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 77 (92)
T ss_dssp TTSCCTTCEEEEEE--TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEET
T ss_pred cccccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHccc
Confidence 34689999999997 89999999999983 2 2 99999999987 8999999963
No 36
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.87 E-value=2.7e-05 Score=63.96 Aligned_cols=56 Identities=21% Similarity=0.401 Sum_probs=44.6
Q ss_pred CCCCCCCeEEEEEcCCC----cEEEEEEeeEeCCceEEEEecCCCE--EEEcCCCcccCCch
Q 022567 98 EKLAVGTKVQAVYSEDG----EWYDATIEAITPNGYYVTYDSWGNK--EEVDPANVRPVNLL 153 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg----~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V~~~~lrp~~~~ 153 (295)
..+.+||.|.+.+..+. .||.|+|.++.++-|.|.|.+|+++ |.|.+++|||.+.+
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~~~~~EiV~~~rlR~~n~~ 120 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPN 120 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC----CEEECGGGEEECCCC
T ss_pred cCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCCCCcceEEehhheEeCCCC
Confidence 56899999999885444 6999999999866699999999984 99999999998653
No 37
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=97.76 E-value=3.3e-05 Score=60.09 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=44.0
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeC--C-c-eEEEEecCCCE--EEEcCCCccc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITP--N-G-YYVTYDSWGNK--EEVDPANVRP 149 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~--~-~-~~V~F~~Ygn~--e~V~~~~lrp 149 (295)
...+.+|++|+|.+ ||.||+|.|.+|.. + . |.|.|.||+.+ |.|+.++|.-
T Consensus 23 ~~~~~vG~kv~v~~--~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l 79 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 79 (94)
T ss_dssp GGGCCTTEEEEEEC--SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCS
T ss_pred cccccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHccc
Confidence 34589999999996 89999999999983 2 2 99999999987 9999999963
No 38
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=96.73 E-value=1e-05 Score=61.99 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=44.8
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeC---Cc-eEEEEecCCCE--EEEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITP---NG-YYVTYDSWGNK--EEVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~---~~-~~V~F~~Ygn~--e~V~~~~lrp~ 150 (295)
...|.+|+.|++.+ ++.||+|.|.+|.. .. |.|.|.||+.+ |.|+.+.|+..
T Consensus 10 ~~~~~~Gekv~~~~--~~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~ 67 (85)
T 2lrq_A 10 NTLFVDGERVLCFH--GPLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKY 67 (85)
Confidence 45689999999998 57899999999973 23 99999999987 89999999876
No 39
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=97.51 E-value=0.00037 Score=50.93 Aligned_cols=55 Identities=25% Similarity=0.485 Sum_probs=43.0
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEe-CCc-eEEEEecCCCE--EEEcCC--CcccC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAIT-PNG-YYVTYDSWGNK--EEVDPA--NVRPV 150 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~-~~~-~~V~F~~Ygn~--e~V~~~--~lrp~ 150 (295)
+....|++|.++.|+.. .+.||.|+|..|. .++ +.|.|+|+.+. +.+..+ +|+|+
T Consensus 8 ~~~~~F~vGmkLEa~d~-~~p~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 8 RRGISFEVGAQLEARDR-LKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp CTTCCCSTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCCCCcCCCCEEEEEEC-CCCccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 34567999999999964 6778999999995 444 99999999865 666655 46664
No 40
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=97.47 E-value=0.0002 Score=56.36 Aligned_cols=55 Identities=11% Similarity=0.169 Sum_probs=45.7
Q ss_pred CCCCCCCCeEEEEEcC---CCcEEEEEEeeEeC------C--c-eEEEEecCCCE--EEEcCCCcccCC
Q 022567 97 QEKLAVGTKVQAVYSE---DGEWYDATIEAITP------N--G-YYVTYDSWGNK--EEVDPANVRPVN 151 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~---Dg~wY~A~I~~i~~------~--~-~~V~F~~Ygn~--e~V~~~~lrp~~ 151 (295)
...|.+|+.|++.+.+ .+.+|.|.|..|.. . . |.|.|.||+.+ |.|+.+.|+..+
T Consensus 17 ~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ 85 (101)
T 3m9q_A 17 TPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDT 85 (101)
T ss_dssp CCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEEECC
T ss_pred CCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcccCC
Confidence 3469999999998731 38999999999973 1 2 99999999987 999999999874
No 41
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=97.36 E-value=0.0003 Score=54.42 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=42.2
Q ss_pred CCCeEEEEEcCCCcEEEEEEeeEeC-----Cc--eEEEEecCCCE--EEEcCCCcccC
Q 022567 102 VGTKVQAVYSEDGEWYDATIEAITP-----NG--YYVTYDSWGNK--EEVDPANVRPV 150 (295)
Q Consensus 102 vGd~C~A~~s~Dg~wY~A~I~~i~~-----~~--~~V~F~~Ygn~--e~V~~~~lrp~ 150 (295)
.|+.|++.++ ||.||+|.|.++.. .. |.|.|.+|+.+ |.|+.++|...
T Consensus 17 ~~e~vlc~~~-dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~ 73 (92)
T 2bud_A 17 PDKIYFIRRE-DGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDN 73 (92)
T ss_dssp TTSCEEEECT-TSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTTEESC
T ss_pred CCCEEEEEeC-CCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHHhchh
Confidence 4889999986 99999999999872 22 99999999987 99999999987
No 42
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=97.23 E-value=0.00041 Score=56.03 Aligned_cols=51 Identities=20% Similarity=0.426 Sum_probs=44.6
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.+.+|+.|.|+|. +|.||+|+|+++.... |.|.|.|-..+..+..++|--.
T Consensus 5 ~v~vGq~V~akh~-ngryy~~~V~~~~~~~~y~V~F~DgS~s~dl~peDIvs~ 56 (118)
T 2qqr_A 5 SITAGQKVISKHK-NGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQ 56 (118)
T ss_dssp CCCTTCEEEEECT-TSSEEEEEEEEEEEEEEEEEEETTSCEEEEECGGGBCSS
T ss_pred eeccCCEEEEECC-CCCEEeEEEEEEeeEEEEEEEcCCCCccCCCCHhhcccc
Confidence 4799999999986 9999999999998666 9999999887888888888655
No 43
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.00037 Score=57.66 Aligned_cols=52 Identities=27% Similarity=0.486 Sum_probs=44.7
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeC------------------------------C------------ceEEEEec
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITP------------------------------N------------GYYVTYDS 135 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~------------------------------~------------~~~V~F~~ 135 (295)
..|.+|++|+|.+ .+.||+|.|..|.. . .|.|.|.|
T Consensus 8 ~~f~~gekvl~~h--g~llYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~G 85 (136)
T 2k3y_A 8 QEFALGGRVLAFH--GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQG 85 (136)
T ss_dssp GSCCTTSEEEEEC--SSCEEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTT
T ss_pred cccCCCCEEEEEE--CCeeEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCC
Confidence 3589999999998 57899999998762 1 39999999
Q ss_pred CCCE--EEEcCCCcccCC
Q 022567 136 WGNK--EEVDPANVRPVN 151 (295)
Q Consensus 136 Ygn~--e~V~~~~lrp~~ 151 (295)
|..+ |.|+.+.|+..+
T Consensus 86 Wn~rwDEWV~~dRil~~~ 103 (136)
T 2k3y_A 86 WKSSWDEWVGYDRIRAYN 103 (136)
T ss_dssp SCGGGCEEEETTTEEESC
T ss_pred cCCcceeeecHhhhhhCC
Confidence 9987 999999999875
No 44
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=97.16 E-value=0.00045 Score=55.13 Aligned_cols=53 Identities=23% Similarity=0.339 Sum_probs=44.6
Q ss_pred CCCCCCCeEEEEEcCC----CcEEEEEEeeEeC----C----c-eEEEEecCCCE--EEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSED----GEWYDATIEAITP----N----G-YYVTYDSWGNK--EEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~D----g~wY~A~I~~i~~----~----~-~~V~F~~Ygn~--e~V~~~~lrp~~ 151 (295)
..|.+|+.|++.+ +| +.||.|.|..|.. . . |.|.|.||+.+ |.|+.+.|...+
T Consensus 18 ~~F~~GEkVLc~h-gd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~ 85 (110)
T 3m9p_A 18 FKFHSGEKVLCFE-PDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp CCSCTTCEEEEEC-SCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred CcccCCCEEEEEc-CCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCHhhhhcCC
Confidence 4589999999976 46 7999999999962 1 3 99999999976 899999998874
No 45
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.91 E-value=0.00084 Score=59.97 Aligned_cols=53 Identities=25% Similarity=0.477 Sum_probs=45.1
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeC---------Cc--eEEEEecCCCE--EEEcCCCcccCC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITP---------NG--YYVTYDSWGNK--EEVDPANVRPVN 151 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~---------~~--~~V~F~~Ygn~--e~V~~~~lrp~~ 151 (295)
-|+||+.|-|+....|.||.|.|..|+. +. |.|.|++|.+. ..+...+|||..
T Consensus 2 ~yki~~~vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~~~~~~~~~~~~~~irpra 67 (226)
T 3ask_A 2 LYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 67 (226)
T ss_dssp CSCTTCEEEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETTCGGGCEEEEEGGGEEECC
T ss_pred ccccCceEEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeecccCcccCceecccccccccc
Confidence 4799999999998899999999999983 44 99999999654 567778899874
No 46
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=96.83 E-value=0.0022 Score=51.16 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=44.5
Q ss_pred CCCCCCCCCeEEEEEcC---CCcEEEEEEeeEe---C-C----c-eEEEEecCCCE--EEEcCCCcccCC
Q 022567 96 NQEKLAVGTKVQAVYSE---DGEWYDATIEAIT---P-N----G-YYVTYDSWGNK--EEVDPANVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~---Dg~wY~A~I~~i~---~-~----~-~~V~F~~Ygn~--e~V~~~~lrp~~ 151 (295)
....|.+|+.|+|.+.+ ...+|.|.|..|. + . . |.|.|.|++.+ |.|+.+.|++.+
T Consensus 16 ~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~n 85 (110)
T 3oa6_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDT 85 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGGGEEECC
T ss_pred CCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChhhhhcCC
Confidence 34579999999998743 2369999999885 1 1 1 99999999987 999999999874
No 47
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=96.68 E-value=0.0036 Score=52.74 Aligned_cols=57 Identities=23% Similarity=0.420 Sum_probs=47.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC------------------Cc--eEEEEecCCC--EEEEcCCCcccCC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITP------------------NG--YYVTYDSWGN--KEEVDPANVRPVN 151 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~------------------~~--~~V~F~~Ygn--~e~V~~~~lrp~~ 151 (295)
+...-+++|+.+=|+=..-|.|+.|.|..|+. +. |.|+|++|.+ ...+++.+|||..
T Consensus 6 ~~~glYKinelVDarD~~~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~gvv~~~~~~iRpRA 84 (161)
T 3db3_A 6 TELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENGVVQMNSRDVRARA 84 (161)
T ss_dssp BCCCSSCTTCEEEEECTTTCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGCEEEEEGGGEECCC
T ss_pred cccceEEecceeeeeccCCCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCCeEecchhccccce
Confidence 45567999999999987789999999999872 33 9999999964 4678889999974
No 48
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=96.65 E-value=0.0005 Score=55.92 Aligned_cols=52 Identities=19% Similarity=0.349 Sum_probs=44.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
..+.+|+.|.|+|. +|.||+|+|.+++... |.|.|.|-.....+..++|--.
T Consensus 5 ~~v~vGq~V~ak~~-ngryy~~~V~~~~~~~~y~V~F~DgS~s~dl~PedIvs~ 57 (123)
T 2xdp_A 5 KVISVGQTVITKHR-NTRYYSCRVMAVTSQTFYEVMFDDGSFSRDTFPEDIVSR 57 (123)
T ss_dssp CCCCTTCCCCCCCC-CCCCCCCEEEEEEEEEEEEEEETTSCEEEEECGGGBCSS
T ss_pred cccccCCEEEEECC-CCcEEeEEEEEEeeEEEEEEEcCCCCccCCCCHhHcccc
Confidence 35899999999986 8999999999998655 9999998777787877777544
No 49
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=96.50 E-value=0.0045 Score=50.64 Aligned_cols=50 Identities=14% Similarity=0.381 Sum_probs=39.7
Q ss_pred CCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec-CCCEEEEcCCCcccCCch
Q 022567 103 GTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS-WGNKEEVDPANVRPVNLL 153 (295)
Q Consensus 103 Gd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~-Ygn~e~V~~~~lrp~~~~ 153 (295)
+..|..+- .+|.||.|.|..|.++.++|.|.+ +...+.|++++|||.++.
T Consensus 5 ~~~VEV~~-~~G~~y~a~V~~v~~d~~~V~f~n~w~~~~~vp~~~vRlpP~~ 55 (128)
T 3h8z_A 5 GLPVEVRG-SNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPA 55 (128)
T ss_dssp TCEEEEEC-TTSCEEEEEEEEECSSEEEEEETTCTTCCEEEEGGGEECCCCC
T ss_pred ccEEEEec-CCCCEEEEEEEEEeCCcEEEEEccccCcceEechhhEEcCCCc
Confidence 55666664 589999999999977779999964 333589999999998653
No 50
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=96.37 E-value=0.0042 Score=54.80 Aligned_cols=48 Identities=23% Similarity=0.413 Sum_probs=39.3
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeC--Cc--eEEEEecCCCEEEEcCCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITP--NG--YYVTYDSWGNKEEVDPANV 147 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~--~~--~~V~F~~Ygn~e~V~~~~l 147 (295)
..++||..++|+|. ++.||+|+|++|.. ++ |.|+|.+=|. ..|+..+|
T Consensus 7 ~~l~Vg~~vlg~k~-~~~W~rg~v~~I~~~~~g~~YkVkF~~~g~-~ivs~~hi 58 (213)
T 3dlm_A 7 GDLIVSMRILGKKR-TKTWHKGTLIAIQTVGPGKKYKVKFDNKGK-SLLSGNHI 58 (213)
T ss_dssp TTEETTCEEEEECT-TSBEEEEEEEEEEEETTEEEEEEEESSSCE-EEECGGGE
T ss_pred CcEEEccEEEEEec-CCcEEEEEEEEEEECCCCeEEEEEEcCCCC-EEeecceE
Confidence 35789999999996 79999999999884 45 9999997554 46777666
No 51
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=96.19 E-value=0.032 Score=45.48 Aligned_cols=51 Identities=29% Similarity=0.522 Sum_probs=41.6
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeC----------------------------------------Cc--eEEEEecC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITP----------------------------------------NG--YYVTYDSW 136 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~----------------------------------------~~--~~V~F~~Y 136 (295)
.|++|..|+|.+ .+.-|.|+|..|-+ .+ |.|.|.||
T Consensus 7 ~f~~gE~VlcfH--g~~~YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 84 (130)
T 3e9g_A 7 EFALGGRCLAFH--GPLMYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQGW 84 (130)
T ss_dssp CCCTTCEEEEEE--TTEEEEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETTS
T ss_pred cccCCCEEEEEe--CCcceeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCCC
Confidence 589999999998 58899999999931 11 88888888
Q ss_pred CCE--EEEcCCCcccCC
Q 022567 137 GNK--EEVDPANVRPVN 151 (295)
Q Consensus 137 gn~--e~V~~~~lrp~~ 151 (295)
+.+ +.|+.++|+..+
T Consensus 85 n~~WDEWV~e~rvlk~~ 101 (130)
T 3e9g_A 85 KSSWDEWVGYDRIRAYN 101 (130)
T ss_dssp CGGGCEEEETTTEECSS
T ss_pred CCChhhccCHhhhhccC
Confidence 876 888888888763
No 52
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=95.18 E-value=0.041 Score=43.56 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=44.7
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC------Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP------NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~------~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
....|++||.|.|+.. .=-|+||+|..+.. .+ |.|.|.|-++...|+..+|.|+.
T Consensus 16 ~~~~~~~GdlVwaK~k-GyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~ 77 (110)
T 1ri0_A 16 RQKEYKCGDLVFAKMK-GYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYE 77 (110)
T ss_dssp CSSSCCTTCEEEEEET-TEEEEEEEEECCCSSSSCCCSSCEEEEETTTTEEEEECSTTEECHH
T ss_pred ccCCCCCCCEEEEEeC-CCCCCCEEEecccHhhcCCCCCEEEEEEecCCCEEEECHHHccchh
Confidence 4457999999999985 44588999987652 24 99999887777899999999983
No 53
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=95.08 E-value=0.026 Score=43.43 Aligned_cols=53 Identities=17% Similarity=0.211 Sum_probs=44.5
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeC------Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITP------NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~------~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
..|++||.|.|+.. .--|-||+|..+.+ .+ |.|.|.|-++...|...+|.|+.
T Consensus 4 ~~f~~GdlVwaK~~-g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~~awv~~~~l~pf~ 63 (94)
T 3qby_A 4 HAFKPGDLVFAKMK-GYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFPYD 63 (94)
T ss_dssp CCCCTTCEEEECCT-TSCCEEEEECCCCTTSBCCCTTCEEEEETTTCCEEEECGGGEEEHH
T ss_pred CcCccCCEEEEecC-CCCCCCEEEeecccccccCCCCEEEEEEEcCCCcceEchhHeeEHH
Confidence 46999999999986 44577999998853 24 99999988888999999999984
No 54
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=94.61 E-value=0.041 Score=47.42 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=34.6
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeCC--c-eEEEEecCC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITPN--G-YYVTYDSWG 137 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~--~-~~V~F~~Yg 137 (295)
...|..|+.|||+|-+==.||+|+|.+.-.. + |.|.|.|-.
T Consensus 114 ~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 114 EALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp GGSCCTTCEEEEECTTSSEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred cccCCCCCEEEEeCCCCceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 3569999999999976788999999987643 4 999999864
No 55
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=94.58 E-value=0.047 Score=44.27 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=42.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
....+|..+..+|. ||.-|.|+..+..... |+|.|.+- ...++..++|.-+
T Consensus 63 GpP~~G~~V~V~W~-DG~~y~a~f~g~~~~~~YtV~FeDg-s~~~~kR~~iyt~ 114 (123)
T 2xdp_A 63 GPPAEGEVVQVKWP-DGKLYGAKYFGSNIAHMYQVEFEDG-SQIAMKREDIYTL 114 (123)
T ss_dssp CCCCTTCEEEEECT-TSCEEEEEEEEEEEEEEEEEECTTS-CEEEEEGGGCCCS
T ss_pred CCCCCCCEEEEEcC-CCCEEeEEEeeeeeEEEEEEEECCC-CeEEecHHHcccc
Confidence 34678999999996 9999999999998666 99999984 5678888888765
No 56
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=94.57 E-value=0.065 Score=42.07 Aligned_cols=55 Identities=20% Similarity=0.117 Sum_probs=44.7
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEe-----------CCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAIT-----------PNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~-----------~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
...+.+||.|.|+.. .--|+||+|.... ..+ |.|.|.|-++...|+..+|.|+..
T Consensus 6 g~~~~~GdlVwaK~~-g~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~p~~~ 72 (110)
T 2daq_A 6 SGKLHYKQIVWVKLG-NYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVE 72 (110)
T ss_dssp CCSCCSSEEEEEECS-SSCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTTTEEEEECSSSSEECCS
T ss_pred CCCCCCCCEEEEEeC-CCCCCceeeCChhhCCHHHhhccCCCCcEEEEEecCCCEEEEcHHHCcCcch
Confidence 346899999999986 3669999998773 124 999998877778999999999853
No 57
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=94.54 E-value=0.074 Score=42.07 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=44.2
Q ss_pred CCCCCCCCCCeEEEEEcCC-CcEEEEEEeeEeCCceEEEEecCCCE--EE--EcCCCcccC
Q 022567 95 DNQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--EE--VDPANVRPV 150 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--e~--V~~~~lrp~ 150 (295)
.+...|++|.+..|+-..+ ..++.|+|.+|.+..+.|.|++|++. .. +.-.+|.|+
T Consensus 9 ~p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPV 69 (107)
T 1wjq_A 9 KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPV 69 (107)
T ss_dssp CCSSSCCSSCEEEEECTTCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEET
T ss_pred CCcccCCCCCEEEEEcCCCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccC
Confidence 4557899999999997433 46999999999655599999999975 34 455578887
No 58
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=94.34 E-value=0.067 Score=47.11 Aligned_cols=56 Identities=23% Similarity=0.447 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCeEEEEEcCCC--cEEEEEEeeEeC--Cc--eEEEEecCCCEEEEcCCCcccC
Q 022567 94 SDNQEKLAVGTKVQAVYSEDG--EWYDATIEAITP--NG--YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 94 ~~~~~~~kvGd~C~A~~s~Dg--~wY~A~I~~i~~--~~--~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.|....+.||.+|.|.|.+.+ .||.++|-.... |. |.|.|++ |-..-|.+.+|+++
T Consensus 63 ~p~~~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDD-G~~~Yv~~~~V~~V 124 (213)
T 3dlm_A 63 HPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDD-GYASYVTQSELYPI 124 (213)
T ss_dssp CCCGGGCCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETT-SCEEEECGGGEEEB
T ss_pred CCCccEEeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeC-CCcceecCceEEEE
Confidence 355667999999999997433 599999988863 33 9999987 66679999999987
No 59
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=94.32 E-value=0.08 Score=44.05 Aligned_cols=48 Identities=21% Similarity=0.276 Sum_probs=38.9
Q ss_pred CCeEEEEEcC-CCcEEEEEEeeEeC-----Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 103 GTKVQAVYSE-DGEWYDATIEAITP-----NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 103 Gd~C~A~~s~-Dg~wY~A~I~~i~~-----~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
-.+|+|.|.+ ...||||++.+... .. |.|+|+|-... +|+...+|.+.
T Consensus 9 ~NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs~~~-~V~~~~vk~Le 63 (153)
T 2fhd_A 9 KNRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDATMS-TVNSNQIKRFF 63 (153)
T ss_dssp GGEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTSCEE-EEETTSEEESC
T ss_pred cceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCCCCC-ccChhhceeee
Confidence 3579999962 46899999999883 33 99999997776 89999998874
No 60
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=94.09 E-value=0.093 Score=43.65 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=45.2
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC-------Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP-------NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~-------~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
....|.+||.|.|+-. .--|+||+|..... .+ |.|.|.|-++...|...+|.|+.
T Consensus 8 ~~~~~~~GDlVWaKvk-GyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~L~p~~ 70 (147)
T 1khc_A 8 DDKEFGIGDLVWGKIK-GFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLVALG 70 (147)
T ss_dssp SSSSCCTTCEEEEEET-TTEEEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGCEETT
T ss_pred CCccCcCCCEEEEecC-CcCCCCEEeccchhhhcccCCCCeEEEEEecCCCEEEEcHHHCccch
Confidence 4457999999999985 44688999987653 24 99999888888999999999984
No 61
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=93.67 E-value=0.057 Score=44.95 Aligned_cols=55 Identities=9% Similarity=0.143 Sum_probs=44.7
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeC------Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITP------NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~------~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
-...|++||.|.|+.. .--|.||+|..+.. .+ |.|.|.|-.+...|...+|.|+.
T Consensus 19 ~~~~f~~GdlVwaK~~-g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~~awv~~~~l~~f~ 80 (153)
T 4fu6_A 19 MTRDFKPGDLIFAKMK-GYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYS 80 (153)
T ss_dssp SGGGCCTTCEEEECCT-TSCCEEEEECCCC---CCCCTTCEEEEETTTCCEEEECGGGEEEHH
T ss_pred cccCCCCCCEEEEeCC-CCCCCCEEEeEchhhccCCCCCEEEEEecCCCCeEEeCHHHccChH
Confidence 3467999999999985 34588999987642 23 99999888888999999999973
No 62
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=92.74 E-value=0.012 Score=46.95 Aligned_cols=52 Identities=23% Similarity=0.354 Sum_probs=43.8
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
...+++|..+.++. +|+.|-+|+|..|.+.. |+|.|+|-+. -++....|+.-
T Consensus 54 kG~l~vG~~ve~~~-~~~~~~~~~I~~i~D~S~YtVVFdDGD~-ktLrRt~lclK 106 (118)
T 2lcd_A 54 KGPLRVGAIVETRT-SDGSFQEAIISKLTDASWYTVVFDDGDE-RTLRRTSLCLK 106 (118)
Confidence 45789999999998 48999999999999888 9999998554 57787777764
No 63
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=93.41 E-value=0.12 Score=41.47 Aligned_cols=50 Identities=28% Similarity=0.375 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
...+|..+..+|. ||+-|.|+..+..... |+|.|.+- ..-++..++|.-+
T Consensus 63 pP~~G~~V~V~W~-DG~~y~a~f~g~~~~~~Y~V~feDg-s~~~~kR~~iyt~ 113 (118)
T 2qqr_A 63 PPAEGEVVQVRWT-DGQVYGAKFVASHPIQMYQVEFEDG-SQLVVKRDDVYTL 113 (118)
T ss_dssp CCCTTCEEEEECT-TSCEEEEEEEEEEEEEEEEEEETTS-CEEEECGGGEEET
T ss_pred CCCCCCEEEEEcC-CCCEeeeEEeceeEEEEEEEEECCC-CEEEEcHHHeecc
Confidence 4578999999996 9999999999987666 99999984 4567777777654
No 64
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=93.09 E-value=0.11 Score=43.60 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=47.2
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEe-------CCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAIT-------PNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~-------~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
.+...|.+||.|.|+-. .--|.||+|.... ..+ |.|.|-|-++...|...+|.|+..
T Consensus 12 ~dg~~f~~GDLVWaKvk-G~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~~awv~~~~L~pf~e 76 (154)
T 3llr_A 12 EDGRGFGIGELVWGKLR-GFSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSS 76 (154)
T ss_dssp CSSCCCCTTCEEEECCT-TSCCEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred ccCCCCccCCEEEEecC-CCCCCCEEEecccccccccCCCCEEEEEEeCCCCEEEEcHHHCcchhh
Confidence 34567999999999985 4568899999874 234 999998888899999999999854
No 65
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=92.82 E-value=0.14 Score=49.90 Aligned_cols=55 Identities=27% Similarity=0.378 Sum_probs=41.0
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCC---EEEEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGN---KEEVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn---~e~V~~~~lrp~ 150 (295)
+...|++|+.|||+|-+==+||+|+|......+ |.|.|.|=.+ ...|...-+-|+
T Consensus 454 ~~~~~~~~~~v~a~~p~tt~fy~a~v~~~~~~~~~~~~f~~~~~~~~~~~~~~~~v~~~ 512 (522)
T 3mp6_A 454 PTKNYPPGTKVLARYPETTTFYPAIVIGTKRDGTCRLRFDGEEEVDKETEVTRRLVLPS 512 (522)
T ss_dssp CCCCCCTTCEEEEECTTCSEEEEEEEEEECTTSCEEEEETTC----CCEEECGGGEEEC
T ss_pred cccCCCCCCEEEEECCCCcceEeEEEecCCCCCeEEEEecCCCCCCccccccceeEEec
Confidence 346799999999999777889999999987667 9999998431 134454444444
No 66
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=92.78 E-value=0.26 Score=44.21 Aligned_cols=55 Identities=22% Similarity=0.330 Sum_probs=43.1
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EE--EcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EE--VDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~--V~~~~lrp~ 150 (295)
....|++|.+..|.- ..-..++.|+|.+|.+..+.|.|+||.+. .. ..-.+|+|+
T Consensus 168 ~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~rl~v~fDgw~~~~D~W~~~dSp~I~Pv 227 (243)
T 2biv_A 168 PLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPA 227 (243)
T ss_dssp SSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred ccccccCCCEEEEEccCCCCeEEEEEEEEecCCEEEEEECCCCCcCCEEEeCCCCCeecC
Confidence 346899999999997 33367999999999876799999999874 33 444567776
No 67
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=92.70 E-value=0.16 Score=41.29 Aligned_cols=57 Identities=12% Similarity=0.097 Sum_probs=44.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEe---------C-Cc-eEEEEecCC-CEEEEcCCCcccCCc
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAIT---------P-NG-YYVTYDSWG-NKEEVDPANVRPVNL 152 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~---------~-~~-~~V~F~~Yg-n~e~V~~~~lrp~~~ 152 (295)
+....|.+||.|.|+.. .--|+||+|.... . .+ |.|.|.|-. +...|+..+|.|+..
T Consensus 18 ~~~~~~~~GdlVwaK~~-g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~pf~~ 86 (134)
T 2gfu_A 18 PTSSDFSPGDLVWAKME-GYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 86 (134)
T ss_dssp CSSCCCCTTSEEEECCT-TSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEEEEECGGGEEESCC
T ss_pred CcCCCCCCCCEEEEeec-CCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCCceEEECHHHcccCcc
Confidence 34567999999999985 4458899998763 1 24 999997753 458999999999954
No 68
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=92.64 E-value=0.17 Score=39.75 Aligned_cols=53 Identities=21% Similarity=0.251 Sum_probs=42.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEe----------C-Cc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAIT----------P-NG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~----------~-~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
..|++||.|.|+-. .=-|+||+|.... . .+ |.|.|-|=++...|...+|.|+.
T Consensus 4 ~~~~~GdlVwaK~~-gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~ 68 (108)
T 2l89_A 4 DRLNFGDRILVKAP-GYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLL 68 (108)
T ss_dssp CCCCTTEEEEEECS-SSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTTTEEEEECGGGEEECC
T ss_pred CcccCCCEEEEEeC-CcCCCceEecCcccCcHHHhhccCCCCeEEEEECCCCCEEEEchhhceeCC
Confidence 46899999999985 3458899997532 1 24 99999876666899999999995
No 69
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=92.22 E-value=0.19 Score=39.29 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=43.6
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEee---Ee----------CCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEA---IT----------PNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~---i~----------~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
...|.+||.|.|+.. .--|+||+|.. +. ..+ |.|.|.|-++...|...+|.|+..
T Consensus 4 ~~~~~~GdlVwaK~~-gyP~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~ 72 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMS-GFPWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNKEYLWTGSDSLTPLTS 72 (109)
T ss_dssp CCCCCTTCEEEEEET-TEEEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTTCCEEEEGGGEEECCH
T ss_pred cccCCCCCEEEEEeC-CcCCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCCCEEEECHHHeeeCCc
Confidence 356899999999985 34599999984 11 134 999998877778999999999953
No 70
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=87.04 E-value=1.2 Score=37.33 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=43.2
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEe-------------------------------CCc-eEEEEecC-CCEEEEc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAIT-------------------------------PNG-YYVTYDSW-GNKEEVD 143 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~-------------------------------~~~-~~V~F~~Y-gn~e~V~ 143 (295)
...|.+||.|.|+.+ -=-||||.|..-. ... |.|.|.|= .+-..|+
T Consensus 34 ~~~~~pgdlVWAK~~-GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~aWV~ 112 (158)
T 3pfs_A 34 RGDLEPLELVWAKCR-GYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWLP 112 (158)
T ss_dssp CSCCCTTCEEEEECT-TSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCEEEEE
T ss_pred CCCCCCCCEEEEecC-CCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCceEeec
Confidence 356999999999984 4569999997611 234 89999885 4668999
Q ss_pred CCCcccCCc
Q 022567 144 PANVRPVNL 152 (295)
Q Consensus 144 ~~~lrp~~~ 152 (295)
..+|+|+..
T Consensus 113 ~~~L~Pl~~ 121 (158)
T 3pfs_A 113 RDKVLPLGV 121 (158)
T ss_dssp GGGEEECSS
T ss_pred cccEeecCC
Confidence 999999953
No 71
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=85.62 E-value=0.16 Score=40.47 Aligned_cols=49 Identities=27% Similarity=0.331 Sum_probs=39.4
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc-eEEEEecCCCEEEEcCCCcc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNG-YYVTYDSWGNKEEVDPANVR 148 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lr 148 (295)
..+.||..|.|+| -|-|++|+|..+...- |.|.|..-..+.+|.-+.|+
T Consensus 5 p~L~VGTeVSAKy--rGAFCEAkIk~V~r~vKcKV~~k~~~~~~~v~d~~ik 54 (118)
T 2lcd_A 5 AYLTVGTDVSAKY--RGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVK 54 (118)
Confidence 3589999999999 5999999999998665 99999875555556666664
No 72
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=85.29 E-value=1.3 Score=39.70 Aligned_cols=55 Identities=25% Similarity=0.262 Sum_probs=42.6
Q ss_pred CCCCCCCCCeEEEEEcC-CCcEEEEEEeeEeCCceEEEEecCCCE--EE--EcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--EE--VDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~--V~~~~lrp~ 150 (295)
....|++|.++.|.-.. -+.++.|+|.+|.+..+.|.|+||.+. .. +.-.+|.|+
T Consensus 59 ~~~~f~vGmKLEa~D~~~~~~~~vATV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~Pv 118 (243)
T 2biv_A 59 PVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPV 118 (243)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSSCEEEETTCTTEECT
T ss_pred CcccccCCCEEEEecCCCCCcEEEEEEEEEeCCEEEEEECCCCCCCCEeecCCCCccccC
Confidence 45779999999999742 257999999999865599999999865 33 344467776
No 73
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=83.97 E-value=2.2 Score=38.62 Aligned_cols=54 Identities=26% Similarity=0.367 Sum_probs=42.3
Q ss_pred CCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EEE--cCCCcccC
Q 022567 97 QEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EEV--DPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V--~~~~lrp~ 150 (295)
...|++|.+..|.- ..-..++.|+|.+|.+..+.|.|+||.+. ..+ .--+|+|+
T Consensus 141 ~~~F~vGMKLEavD~~np~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~~Sp~I~Pv 199 (265)
T 2r58_A 141 ENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPA 199 (265)
T ss_dssp SCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred ccccccCcEEEeccCCCCCCEEEEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCeecC
Confidence 45799999999996 33467999999999865599999999874 344 44467776
No 74
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=82.63 E-value=1.5 Score=35.49 Aligned_cols=55 Identities=13% Similarity=0.168 Sum_probs=43.5
Q ss_pred CCCCCCCCCeEEEEEcCC-CcEEEEEEeeEeCCceEEEEecCCC--E--E--EEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGN--K--E--EVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~D-g~wY~A~I~~i~~~~~~V~F~~Ygn--~--e--~V~~~~lrp~ 150 (295)
+...|++|.++.|.-..+ ..+..|+|.++.+..+.|.|+||++ . - .+.-.+|.|+
T Consensus 8 p~~~f~~GmKLEa~D~~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~Pv 69 (127)
T 1wjr_A 8 PIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPV 69 (127)
T ss_dssp HHHHCCTTCEEEEECSSCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCT
T ss_pred chhhccCCCEeEEecCCCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCcccc
Confidence 345799999999998544 6899999999987669999999998 2 2 3445577776
No 75
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=82.02 E-value=1.4 Score=37.06 Aligned_cols=30 Identities=40% Similarity=0.639 Sum_probs=25.6
Q ss_pred CCCCCCCCCeEEEEEcCC-----CcEEEEEEeeEe
Q 022567 96 NQEKLAVGTKVQAVYSED-----GEWYDATIEAIT 125 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~D-----g~wY~A~I~~i~ 125 (295)
....+.||+.||+=|..| |-||.|.|+.+.
T Consensus 89 ~w~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~ 123 (161)
T 3db3_A 89 KWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKR 123 (161)
T ss_dssp CGGGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEE
T ss_pred cHHHCCcCcEEEEecCCCCccccceeEEEEEeeeh
Confidence 446689999999999645 889999999885
No 76
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=81.13 E-value=2.1 Score=34.82 Aligned_cols=54 Identities=17% Similarity=0.058 Sum_probs=41.6
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEe--C-----------------------------Cc-eEEEEecC-CCEEEEcC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAIT--P-----------------------------NG-YYVTYDSW-GNKEEVDP 144 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~--~-----------------------------~~-~~V~F~~Y-gn~e~V~~ 144 (295)
..+.+||.|-|+-+ -==||+|.|..-. . .. |.|.|.|- .+...|+.
T Consensus 4 ~~~~~~dlVWAK~~-gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~aWv~~ 82 (130)
T 3l42_A 4 SPLDALDLVWAKCR-GYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLPR 82 (130)
T ss_dssp SSSCTTCEEEECCT-TSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCEEEEEG
T ss_pred ccCCCCCEEEEecc-cCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCceEeecc
Confidence 35889999999984 3459999997611 0 33 89999874 45689999
Q ss_pred CCcccCCc
Q 022567 145 ANVRPVNL 152 (295)
Q Consensus 145 ~~lrp~~~ 152 (295)
.+|+|+..
T Consensus 83 ~~i~pl~~ 90 (130)
T 3l42_A 83 TKLVPLGV 90 (130)
T ss_dssp GGEEESSS
T ss_pred cceeecCC
Confidence 99999954
No 77
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=80.58 E-value=18 Score=28.45 Aligned_cols=22 Identities=18% Similarity=0.561 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 022567 9 IEELFSNLSTYKEQLQQVRELL 30 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL 30 (295)
+++|...++.|+.+++.+...+
T Consensus 3 ~~~l~~~~q~l~~~~~~l~~~~ 24 (133)
T 1fxk_C 3 LAEIVAQLNIYQSQVELIQQQM 24 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6788889999999988887765
No 78
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=80.46 E-value=3.1 Score=38.78 Aligned_cols=55 Identities=24% Similarity=0.413 Sum_probs=43.3
Q ss_pred CCCCCCCCCeEEEEEcC-CCcEEEEEEeeEeCCceEEEEecCCCE--EEEcC--CCcccC
Q 022567 96 NQEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--EEVDP--ANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V~~--~~lrp~ 150 (295)
....|++|++..|.-.. -..++.|+|.+|.+..+.|.|+||.+. ..+.. .+|.|+
T Consensus 145 ~~~~F~vGmKLEavD~~np~~icvATV~~v~g~r~~v~~Dg~~~~~D~w~~~~S~~I~PV 204 (331)
T 1oz2_A 145 PPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPV 204 (331)
T ss_dssp CCTTCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECT
T ss_pred CccccccccEEEeccCCCCCcEEEEEEEEeeCCEEEEEeCCCCCccCEEEecCCCCccCC
Confidence 45679999999999732 378999999999977799999999864 34444 466676
No 79
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=78.87 E-value=2.6 Score=38.18 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=42.6
Q ss_pred CCCCCCCCCeEEEEEcCC-CcEEEEEEeeEeCCceEEEEecCCCE--E--EEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVYSED-GEWYDATIEAITPNGYYVTYDSWGNK--E--EVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~D-g~wY~A~I~~i~~~~~~V~F~~Ygn~--e--~V~~~~lrp~ 150 (295)
....|++|.+..|.-..+ ..++.|+|.+|.+..+.|.|+||++. - .+.-.+|.|+
T Consensus 31 ~~~~F~vGMKLEavDp~~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~~~~S~~I~Pv 90 (265)
T 2r58_A 31 PNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAI 90 (265)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSCCEEEETTCTTEECT
T ss_pred CccccccCCEeEEecCCCCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeEeCCCCCeecc
Confidence 457799999999997433 35899999999877799999999754 2 3445577776
No 80
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=76.94 E-value=2.5 Score=37.53 Aligned_cols=32 Identities=38% Similarity=0.582 Sum_probs=26.5
Q ss_pred CCCCCCCCCeEEEEE-----cCCCcEEEEEEeeEeCC
Q 022567 96 NQEKLAVGTKVQAVY-----SEDGEWYDATIEAITPN 127 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-----s~Dg~wY~A~I~~i~~~ 127 (295)
....+.+|..+|+-| ..+|.||.|.|+.+...
T Consensus 72 ~~~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~ 108 (226)
T 3ask_A 72 KWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRET 108 (226)
T ss_dssp CGGGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEEC
T ss_pred CccccccCcEEEEecccCCccccCceeehhhhhhhhc
Confidence 345679999999999 23899999999999843
No 81
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.68 E-value=6.4 Score=27.22 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=38.0
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEe--cCCCEEEEcCCCcc
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD--SWGNKEEVDPANVR 148 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~--~Ygn~e~V~~~~lr 148 (295)
....|.+||.|... +++=.=+.|+|++++.+.+.|... +..+.-+|++.+|+
T Consensus 4 ~~~~f~~GD~V~V~-~Gpf~g~~G~V~evd~e~v~V~v~~fg~~tpvel~~~qv~ 57 (59)
T 2e6z_A 4 GSSGFQPGDNVEVC-EGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELR 57 (59)
T ss_dssp CCSSCCTTSEEEEC-SSTTTTCEEEECCCBTTEEEEEECCSSCCSCEEEETTTEE
T ss_pred ccccCCCCCEEEEe-ecCCCCCEEEEEEEeCCEEEEEEEecCCCceEEEcHHHEE
Confidence 34568999999998 444455899999998766777776 44445677777775
No 82
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=73.34 E-value=5.6 Score=37.04 Aligned_cols=55 Identities=18% Similarity=0.331 Sum_probs=42.5
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EEE--cCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EEV--DPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V--~~~~lrp~ 150 (295)
..+.|++|.++.|.= ..-...+.|+|..|.+..+.|.|+||.+. ..+ .--+|.|+
T Consensus 249 ~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~~~l~v~fDgw~~~~d~w~~~dS~~I~Pv 308 (331)
T 1oz2_A 249 PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDGWSHGYDFWIDADHPDIHPA 308 (331)
T ss_dssp CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETTBCGGGCEEEETTCTTEECT
T ss_pred cccccccCceeEeecccCCCcEEeeEEEEEcCCEEEEEeCCCCCcCCEEEECCCCCcccc
Confidence 346899999999997 33457899999999755599999999875 344 44466776
No 83
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, STR genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=72.51 E-value=3.7 Score=31.45 Aligned_cols=37 Identities=11% Similarity=0.188 Sum_probs=28.9
Q ss_pred CCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccC
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.|.||+|+|++++++++.|.+.+ |...+|+.+.++-.
T Consensus 33 ~~~~~~AvV~~v~~~~~~v~~~~-g~~~~l~~~~~~WA 69 (106)
T 3d0f_A 33 SDDILAAVVLSATPGAVEAFRKN-GETIRITGDGLKAA 69 (106)
T ss_dssp TTTCEEEEEEEEETTEEEEEETT-SCEEEECGGGGSTT
T ss_pred cCCeEEEEEEEeCCCeEEEEEcC-CCeEEEcHHHChhh
Confidence 37899999999998889998865 34556888887643
No 84
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=71.17 E-value=4.5 Score=32.73 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=42.9
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCE-----EEEcCCCcccCC
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNK-----EEVDPANVRPVN 151 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~-----e~V~~~~lrp~~ 151 (295)
..+..|..|-.+|. |--|.||+|.+|.-. . ..|.|++-+-. -.|++..|+|++
T Consensus 3 ~~~e~GmlVW~K~q-~yPfWPAVVKSV~r~ekkA~VL~Ie~~m~~ekrGi~V~LrrLK~fD 62 (134)
T 3pmi_A 3 RSFEVGMLVWHKHK-KYPFWPAVVKSVRQRDKKASVLYIEGHMNPKMKGFTVSLKSLKHFD 62 (134)
T ss_dssp -CCCTTCEEEECCT-TSCCEEEEEEEEEGGGTEEEEEECCSSCCTTSCCEEEEGGGCEETT
T ss_pred cccccceEEEEEec-cCCCcchheeeeeeccceEEEEEEeCCCCcccCceEeEcccCCCCC
Confidence 35788999999996 777889999999843 3 99999985522 489999999995
No 85
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=69.76 E-value=5.5 Score=37.00 Aligned_cols=54 Identities=26% Similarity=0.469 Sum_probs=41.1
Q ss_pred CCCCCCCCeEEEEEcC-CCcEEEEEEeeEeCCceEEEEecCCCE--E--EEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVYSE-DGEWYDATIEAITPNGYYVTYDSWGNK--E--EVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~-Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e--~V~~~~lrp~ 150 (295)
.+.|++|.+..|.--. -...+.|+|..|.+..+.|.|+||.+. - .+...+|.|+
T Consensus 141 ~~~F~vGMKLEavDp~~p~~icvATV~~V~g~~l~v~~Dg~~~~~d~w~~~~Sp~I~PV 199 (324)
T 3ut1_A 141 PSGFRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPV 199 (324)
T ss_dssp CCSCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECT
T ss_pred ccccccCCEEEEecCCCCCcEEEEEEEEEECCEEEEEECCCCCcCCEEEECCCCCcccC
Confidence 4679999999999732 255889999999876699999999864 2 3344566776
No 86
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=68.69 E-value=10 Score=36.71 Aligned_cols=55 Identities=24% Similarity=0.397 Sum_probs=43.0
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--E--EEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--E--EVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e--~V~~~~lrp~ 150 (295)
..+.|++|.+..|.- ..-.....|+|..|.+.-+.|.|+||.+. . .+...+|.|+
T Consensus 359 ~~~~F~~GMKLEAvD~~np~~IcvATV~~v~~~~l~v~fDgw~~~~d~w~~~~S~~I~Pv 418 (437)
T 3feo_A 359 PNHGFRVGMKLEAVDLMEPRLICVATVTRIIHRLLRIHFDGWEEEYDQWVDCESPDLYPV 418 (437)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred ccccCccCCEEEeecCCCCCcEEEEEEeEEcCCEEEEEECCCCCcCCeEEeCCCCCcccC
Confidence 446799999999997 33467899999999865599999999864 2 3455577776
No 87
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=66.00 E-value=11 Score=36.68 Aligned_cols=55 Identities=18% Similarity=0.332 Sum_probs=43.4
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EEE--cCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EEV--DPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V--~~~~lrp~ 150 (295)
....|++|.+..|.= ..-+....|+|..|.+..+.|.|+||++. ..+ ...+|.|+
T Consensus 373 ~~~~F~~gmkLEAvD~~np~~icvATV~~v~~~~~~i~fDgw~~~~d~w~~~~S~dI~Pv 432 (447)
T 3h6z_A 373 PDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPV 432 (447)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEECTTSCGGGCEEEETTCTTEECT
T ss_pred CCCccccCCEEEeecCCCCCcEEEEEEeEecCCEEEEEeCCCCCcCCEEEecCCCCcccc
Confidence 457899999999986 33467899999999876699999999975 344 44477776
No 88
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=65.79 E-value=18 Score=25.66 Aligned_cols=50 Identities=14% Similarity=0.330 Sum_probs=38.2
Q ss_pred CCCCCeEEEEEcCCCcE--EEEEEeeEeCCceEEEEecCCCE---EEEcCCCcccCC
Q 022567 100 LAVGTKVQAVYSEDGEW--YDATIEAITPNGYYVTYDSWGNK---EEVDPANVRPVN 151 (295)
Q Consensus 100 ~kvGd~C~A~~s~Dg~w--Y~A~I~~i~~~~~~V~F~~Ygn~---e~V~~~~lrp~~ 151 (295)
+-+|..|...-. +..| |.+.|..|++..+.|.|.| ||= .+.++++|....
T Consensus 2 ilPG~~V~V~np-~~~Yy~y~G~VQRvsdgkaaVLFEG-GnWDKLVTf~L~eLe~~~ 56 (66)
T 2jz2_A 2 IFPGATVRVTNV-DDTYYRFEGLVQRVSDGKAAVLFEN-GNWDKLVTFRLSELEAVK 56 (66)
T ss_dssp CCTTCEEEECCT-TSTTBTCEEEEEEEETTEEEEEEES-SSCEEEEEEESTTEEECC
T ss_pred ccCCCEEEEeCC-CCcccceeEEEEEecCCcEEEEecC-CCceeEEEEEhhHceecc
Confidence 457888888853 5555 5899999998779999999 553 577888887753
No 89
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=65.52 E-value=34 Score=27.61 Aligned_cols=21 Identities=10% Similarity=0.172 Sum_probs=17.0
Q ss_pred CCCeEEEEEcCCCcEEEEEEee
Q 022567 102 VGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 102 vGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
.|..++.... ++.|-+|+|..
T Consensus 58 ~~~~ilvplg-~~~yv~g~i~~ 78 (151)
T 2zdi_C 58 EKPEILVPIG-AGSFLKGVIVD 78 (151)
T ss_dssp SSCEEEEECS-SSCEEEEECSC
T ss_pred CCceEEEEcC-CCeEEEEEECC
Confidence 4677888874 89999999974
No 90
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=65.31 E-value=13 Score=36.20 Aligned_cols=55 Identities=22% Similarity=0.375 Sum_probs=42.8
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EE--EcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EE--VDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~--V~~~~lrp~ 150 (295)
+...|++|.+..|.= ..-+..+.|+|..|.+..+.|.|+|+... .. +...+|.|+
T Consensus 363 ~~~~F~~GMKLEAvD~~np~~icvATV~~v~~~~l~i~fDgw~~~~d~w~~~~S~~I~Pv 422 (456)
T 3f70_A 363 PNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDCESPDIYPV 422 (456)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred CccccccCCEEEeecCCCCCcEEEEEEEEecCCEEEEEeCCCCCCCCeEeecCCCCcccc
Confidence 346799999999997 33467899999999865599999999964 33 445577877
No 91
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=65.30 E-value=14 Score=34.29 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=42.1
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCceEEEEecCCCE--EEE--cCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNGYYVTYDSWGNK--EEV--DPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~--e~V--~~~~lrp~ 150 (295)
+.+.|++|.++.|.= ..-.....|+|..|.+..+.|.|+|+.+. ..+ ..-+|.|+
T Consensus 244 ~~~~F~~gmkLEAvD~~~p~licvATV~~v~g~~l~v~fDgw~~~~d~w~~~~S~dI~Pv 303 (324)
T 3ut1_A 244 PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPV 303 (324)
T ss_dssp CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETTSCGGGCEEEETTCTTEECT
T ss_pred ccccCCCCCeeeccCCCCCCceeEEEEEEecCCEEEEEeCCCCCCCCEEEeCCCCCeece
Confidence 446899999999996 33356789999999655599999999874 233 44477776
No 92
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=59.76 E-value=10 Score=30.81 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHH
Q 022567 14 SNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIA 51 (295)
Q Consensus 14 ~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI~ 51 (295)
-.|.+|..-+.-|+.+|..+|+|..-+.|+.-++.-|.
T Consensus 89 yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~ 126 (134)
T 3o48_A 89 YKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQ 126 (134)
T ss_dssp HHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 46778999999999999999999999999998888775
No 93
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=58.73 E-value=8.1 Score=31.85 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHH
Q 022567 14 SNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVI 50 (295)
Q Consensus 14 ~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI 50 (295)
-.|.+|..-+.-|+.+|..+|+|..-+.|+.-+++-|
T Consensus 88 ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i 124 (144)
T 1y8m_A 88 YKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKI 124 (144)
T ss_dssp HTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 4577899999999999999999999999998887765
No 94
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=57.27 E-value=11 Score=32.94 Aligned_cols=35 Identities=6% Similarity=0.097 Sum_probs=28.2
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~ 135 (295)
-.++||.+.. -++|.+|.|+|..++.+.+.+....
T Consensus 28 Rl~~Gd~v~l--dg~g~~~~a~i~~~~~~~~~~~i~~ 62 (229)
T 2egv_A 28 RIEKDEEFGV--IHEGKIYVCKVRREDKREISCEIVE 62 (229)
T ss_dssp TCCTTCCEEE--EETTEEEEEEEEEECSSEEEEEEEE
T ss_pred cCCCCCEEEE--eCCCCEEEEEEEEecCCEEEEEEEE
Confidence 4789999988 4699999999999987666555544
No 95
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=56.57 E-value=17 Score=39.18 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=44.9
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCCc
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
.|..|..|-... ++..|-.|.|.+..++.++|...+-|...+|+.++|.|+++
T Consensus 27 ~~~~~~~vw~~~-~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~~~n~ 79 (1184)
T 1i84_S 27 DWSAKKLVWVPS-EKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP 79 (1184)
T ss_dssp HTTCTTEEEECC-TTTSSEEEEEEEEETTEEEEEETTTCCEEEEETTSCEECCC
T ss_pred CcccCCeEEEEC-CCCCeEEEEEEEecCCeEEEEEcCCCcEEEeeHHHccCCCC
Confidence 599999997764 35779999999987655999999989899999999998854
No 96
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=56.02 E-value=9.3 Score=30.64 Aligned_cols=38 Identities=26% Similarity=0.514 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHH
Q 022567 14 SNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIA 51 (295)
Q Consensus 14 ~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI~ 51 (295)
-.|.+|..-+.-|+.+|..+|+|..-+.|+.-+++-|.
T Consensus 85 yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 85 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 122 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 46778999999999999999999999999988877553
No 97
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=55.18 E-value=14 Score=35.62 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=40.7
Q ss_pred CCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCc-eEEEEecCCCEE-------EEcCCCcccC
Q 022567 97 QEKLAVGTKVQAVY-SEDGEWYDATIEAITPNG-YYVTYDSWGNKE-------EVDPANVRPV 150 (295)
Q Consensus 97 ~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e-------~V~~~~lrp~ 150 (295)
.+.|++|.+..|+- ..-.....|+|.+|.+++ ..|.|+|+.+.. .+.-..|.|+
T Consensus 252 ~~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~Dg~~~~~~~d~~~~h~~Sp~I~PV 314 (437)
T 3feo_A 252 GEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAADGSDWFCYHATSPSIFPV 314 (437)
T ss_dssp SSCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEETTCCC-CCTTCEEEETTCTTEECT
T ss_pred ccccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEeCCCCCCCCCCeEEeeCCCCCcccc
Confidence 35599999999997 223678899999998667 679999987653 3455567776
No 98
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=55.04 E-value=19 Score=32.15 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=29.1
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~ 135 (295)
--.++||.+... -++|.+|.|+|..++.+.+.+....
T Consensus 35 LRl~~Gd~i~l~-dg~G~~~~a~I~~~~~~~~~~~i~~ 71 (268)
T 1vhk_A 35 MRMNEGDQIICC-SQDGFEAKCELQSVSKDKVSCLVIE 71 (268)
T ss_dssp TCCCTTCEEEEE-CTTSCEEEEEEEEECSSEEEEEEEE
T ss_pred hcCCCCCEEEEE-eCCCCEEEEEEEEecCCEEEEEEEE
Confidence 357999998876 5789999999999987666655543
No 99
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=54.60 E-value=20 Score=31.78 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=28.6
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEe
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD 134 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~ 134 (295)
--.++||.+... .++|..|.|+|.+++...+.+...
T Consensus 32 LR~~~Gd~v~l~-dg~g~~~~a~I~~i~~~~~~~~i~ 67 (251)
T 4e8b_A 32 LRMGPGQALQLF-DGSNQVFDAEITSASKKSVEVKVL 67 (251)
T ss_dssp SCCCSCCEEEEE-CSSSEEEEEEEEEECSSCEEEEEE
T ss_pred CcCCCCCEEEEE-eCCCcEEEEEEEEeecceEEEEEe
Confidence 357899999876 578999999999998766655553
No 100
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=54.49 E-value=19 Score=31.71 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=28.5
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEe
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD 134 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~ 134 (295)
-..++||.+... -++|.+|.|+|..++.+.+.+...
T Consensus 39 LRl~~Gd~v~l~-dg~G~~~~a~I~~~~~~~~~~~i~ 74 (234)
T 1z85_A 39 VRLKEGDVIEAT-DGNGFSYTCILKSLKKKTAAAKIV 74 (234)
T ss_dssp TTCCTTCEEEEE-CSBSEEEEEEEEEECSSCEEEEEE
T ss_pred hcCCCCCEEEEE-eCCCCEEEEEEEEecCCEEEEEEE
Confidence 357999998776 578999999999998766655554
No 101
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=54.49 E-value=19 Score=32.06 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=29.4
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~ 135 (295)
--.++||.+... -++|.+|.|+|..++.+.+.+....
T Consensus 34 LRl~~Gd~v~l~-dg~g~~~~a~I~~~~~~~~~~~i~~ 70 (257)
T 1vhy_A 34 LRMTEGEQLELF-DGSNHIYPAKIIESNKKSVKVEILG 70 (257)
T ss_dssp SCCCTTCEEEEE-CSSSEEEEEEEEEECSSCEEEEECC
T ss_pred hccCCCCEEEEE-cCCCCEEEEEEEEeeCCeEEEEEEE
Confidence 357999998775 5789999999999987666666543
No 102
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=51.47 E-value=99 Score=26.44 Aligned_cols=18 Identities=11% Similarity=0.078 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 022567 44 KELSEVIALTEELLATAK 61 (295)
Q Consensus 44 ~dL~EvI~Lt~ell~~~~ 61 (295)
..-.|-|.+++|++..+.
T Consensus 65 ~~~~e~i~i~~DL~e~LT 82 (190)
T 4emc_A 65 SQQAENSEVIKDLYEYLC 82 (190)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHcc
Confidence 345688999999998873
No 103
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=51.44 E-value=57 Score=24.02 Aligned_cols=48 Identities=13% Similarity=0.228 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCC-----ChhHHHHHHHHHHHHHHHHHHH
Q 022567 9 IEELFSNLSTYKEQLQQVRELLVHDPG-----NSEYADMEKELSEVIALTEELL 57 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL~~DP~-----N~ELl~Lk~dL~EvI~Lt~ell 57 (295)
++.|+..|.....++..+++.|. ||+ -+.+..|-.+|.++-.-.+.+.
T Consensus 24 le~le~~Ie~LE~~i~~le~~la-dp~~y~~d~~~~~~l~~~l~~~e~eLe~~~ 76 (89)
T 2lw1_A 24 LEQLPQLLEDLEAKLEALQTQVA-DASFFSQPHEQTQKVLADMAAAEQELEQAF 76 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-STTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999884 343 2456777777766655554443
No 104
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=51.16 E-value=34 Score=29.08 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=42.1
Q ss_pred CCCCCCCCCCeEEEEEc---CCCcEEEEEEeeEeCC-c-eEEEEecCCCE--EEEcCCCcccCCc
Q 022567 95 DNQEKLAVGTKVQAVYS---EDGEWYDATIEAITPN-G-YYVTYDSWGNK--EEVDPANVRPVNL 152 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s---~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~--e~V~~~~lrp~~~ 152 (295)
.....+++|+.|.|+-. +++.|--|.|.++..+ . |.|.=.+=+.. -.++..+|-||+.
T Consensus 40 ~~~~~~~~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d~eg~~~~~~s~~~IIPLP~ 104 (180)
T 3mea_A 40 SGDYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRVIPLPQ 104 (180)
T ss_dssp CTTCCCCTTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECCTTCCEEEEEEGGGEEECCS
T ss_pred CCCcccCCCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCCCCCceeEEeCHHHEEECCC
Confidence 34457899999999984 3468999999998854 3 88866553332 4778888888864
No 105
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=50.73 E-value=23 Score=31.55 Aligned_cols=36 Identities=22% Similarity=0.508 Sum_probs=28.6
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~ 135 (295)
-.++||.+... .++|..|.|+|..++.+.+.+....
T Consensus 32 Rl~~Gd~v~l~-dg~g~~~~a~I~~i~~~~~~~~i~~ 67 (257)
T 3kw2_A 32 RMQAGDRLRLT-DGRGSFFDAVIETADRKSCYVSVCG 67 (257)
T ss_dssp CCCTTCEEEEE-CSBSEEEEEEEEEECSSCEEEEEEE
T ss_pred cCCCCCEEEEE-ECCCCEEEEEEEEeeCCEEEEEEEE
Confidence 47899999887 4689999999999987666665543
No 106
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=48.49 E-value=13 Score=30.67 Aligned_cols=37 Identities=27% Similarity=0.531 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHH
Q 022567 14 SNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVI 50 (295)
Q Consensus 14 ~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI 50 (295)
-.+.+|..-+.-++.+|+.+|+|..=+.|+.-++..|
T Consensus 82 ~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 82 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4567888899999999999999999999888777766
No 107
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=47.77 E-value=34 Score=35.68 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=45.5
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|..|..|-... ++..|-.|.|.+..++.++|...+-|...+|+.++|.|.++
T Consensus 26 ~~~~~~~~vWv~~-~~~~~~~~~v~~~~~~~~~v~~~~~g~~~~v~~~~~~~~np 79 (837)
T 1kk8_A 26 AAFDGKKNCWVPD-EKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNP 79 (837)
T ss_dssp CCCCTTTEEEEEE-TTTEEEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred cccccCCEEEEEC-CCCCeeEEEEEeecCCeEEEEEcCCCceEEeeHHHccccCc
Confidence 4699999998875 46779999999986655999998888888999999988754
No 108
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=47.26 E-value=40 Score=22.64 Aligned_cols=50 Identities=26% Similarity=0.351 Sum_probs=34.9
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEE--EEcCCCcc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKE--EVDPANVR 148 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e--~V~~~~lr 148 (295)
..+.+||.|... ++.=.=+.|+|.+++.. + +.|...-+|... .+++++|.
T Consensus 3 ~~~~~Gd~V~V~-~Gpf~g~~g~v~~v~~~k~~v~V~v~~~Gr~t~v~l~~~~ve 56 (58)
T 1nz9_A 3 VAFREGDQVRVV-SGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVV 56 (58)
T ss_dssp CSCCTTCEEEEC-SGGGTTCEEEEEEEETTTTEEEEEEESSSSEEEEEECGGGEE
T ss_pred cccCCCCEEEEe-ecCCCCcEEEEEEEcCCCCEEEEEEEeCCCEEEEEECHHHEE
Confidence 357899999998 33333479999999865 4 878888788653 45555543
No 109
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=47.10 E-value=62 Score=25.39 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=37.0
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHh-------ccCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 022567 5 EELSIEELFSNLSTYKEQLQQVRELL-------VHDPGNSEYADMEKELSEVIALTEELLATAK 61 (295)
Q Consensus 5 e~~s~e~Le~~L~~Yk~QL~qVe~aL-------~~DP~N~ELl~Lk~dL~EvI~Lt~ell~~~~ 61 (295)
..++|++|+.+|...+.||-.-..=| ..|||.-.+..|..-=. +++..++=|..++
T Consensus 20 ~~~~ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~-~Vs~lq~KiaeLK 82 (113)
T 4fi5_A 20 GSMTMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREG-VAVSIQAKIDELK 82 (113)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 57889999999999998886654444 56999877777765433 3333344444444
No 110
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=46.28 E-value=25 Score=34.05 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=42.3
Q ss_pred CCCCCCCCCeEEEEE-cCCCcEEEEEEeeEeCCc-eEEEEecCCCE--------EEEcCCCcccC
Q 022567 96 NQEKLAVGTKVQAVY-SEDGEWYDATIEAITPNG-YYVTYDSWGNK--------EEVDPANVRPV 150 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~--------e~V~~~~lrp~ 150 (295)
..+.|++|.+..|+- ..-.....|+|.+|..++ ..|.|+||... ..+..-+|.|+
T Consensus 264 ~~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~~~~~~d~f~~~~~S~~I~Pv 328 (447)
T 3h6z_A 264 KTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPA 328 (447)
T ss_dssp CCCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCTTCTTTTCEEEETTCTTEECT
T ss_pred cccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCcccCCCccEEEeCCCCCcCcc
Confidence 346799999999997 334678999999998777 89999998631 13455567776
No 111
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=45.67 E-value=22 Score=34.45 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=36.4
Q ss_pred CCCCCeEEEEE-cCCCcEEEEEEeeEeCCc-eEEEEecCCCEE-------EEcCCCcccC
Q 022567 100 LAVGTKVQAVY-SEDGEWYDATIEAITPNG-YYVTYDSWGNKE-------EVDPANVRPV 150 (295)
Q Consensus 100 ~kvGd~C~A~~-s~Dg~wY~A~I~~i~~~~-~~V~F~~Ygn~e-------~V~~~~lrp~ 150 (295)
|++|.+..|+- ..-.....|+|.+|..++ ..|.|+||...+ .+.-.+|.|+
T Consensus 259 Fk~GMKLEavDP~~~~~icvATV~~V~~~~~l~l~~Dg~~~~~~~d~f~~h~~Sp~I~PV 318 (456)
T 3f70_A 259 FEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPA 318 (456)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEEC--------CCEEEETTCTTEECT
T ss_pred ccCCCEEEEEcCCCCCcEEEEEEEEEecCCEEEEEecCCCccCCCCcEEEeCCCCCcccc
Confidence 99999999997 334679999999998677 889999986532 3455677776
No 112
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=45.62 E-value=30 Score=28.42 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=29.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEe
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD 134 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~ 134 (295)
..|.+|+.+.+. ..+|.-++++|.+|+++.++|-|-
T Consensus 83 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~v~vD~N 118 (158)
T 3cgm_A 83 AEVVPGAQFYAQ-DMEGNPMPLTVVAVEGEEVTVDFN 118 (158)
T ss_dssp SCCCTTCEEEEE-ETTTEEEEEEEEEEETTEEEEECS
T ss_pred CCCccCCEEEEE-CCCCCEEEEEEEEECCCEEEEeCC
Confidence 579999999877 468999999999998776666553
No 113
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=44.37 E-value=37 Score=35.22 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=43.6
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..|-.|..|-... ++..|-.|+|.+..++.++|. .+.|.+.+|+.++|.|+++
T Consensus 29 ~~~~~~~~vWv~d-~~~~~~~~~v~~~~~~~~~v~-~~~g~~~~v~~~~v~~~np 81 (783)
T 4db1_A 29 RPFDLKKDVFVPD-DKQEFVKAKIVSREGGKVTAE-TEYGKTVTVKEDQVMQQNP 81 (783)
T ss_dssp SCCCTTTEEEEEC-SSSSEEEEEEEEECSSEEEEE-ETTTEEEEEEGGGCEECCC
T ss_pred cCCcCCCEEEEEC-CCCCEEEEEEEEecCCEEEEE-ECCCCEEeCCHHHcccCCC
Confidence 4599999998885 467799999999765558888 6778888999999998854
No 114
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=43.81 E-value=39 Score=22.54 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.....-..|+.|+.+++
T Consensus 35 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 35 PREVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEe
Confidence 445678999999888877888999876
No 115
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=43.10 E-value=24 Score=24.23 Aligned_cols=23 Identities=22% Similarity=0.459 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 022567 9 IEELFSNLSTYKEQLQQVRELLV 31 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL~ 31 (295)
+++|+..+..++.+|.+++..|.
T Consensus 46 ~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 46 LQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999888775
No 116
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=42.80 E-value=43 Score=21.89 Aligned_cols=27 Identities=30% Similarity=0.758 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|+.|+.++.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 2bz8_A 15 DDELTISVGEIITNIRKEDGGWWEGQI 41 (58)
T ss_dssp TTBCCBCTTCEEEEEECCTTTEEEEEE
T ss_pred cCEeeECCCCEEEEEEeCCCCEEEEEE
Confidence 345678999999888866788999986
No 117
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=41.61 E-value=42 Score=27.13 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=29.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEec
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~ 135 (295)
..+.+|+.+.+. ..||.-++++|.+|+++.++|=|-+
T Consensus 92 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~v~vD~NH 128 (151)
T 2kr7_A 92 IELEKGMSVFGQ-TEDNQTIQAIIKDFSATHVMVDYNH 128 (151)
T ss_dssp SCCCTTCEEEEE-ETTTEEEEEEEEEECSSEEEEEECC
T ss_pred CCCccCCEEEEE-CCCCCEEEEEEEEECCCEEEEECCC
Confidence 468999999987 4689889999999987667766643
No 118
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=41.19 E-value=47 Score=21.72 Aligned_cols=28 Identities=21% Similarity=0.436 Sum_probs=22.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+..-.++.||.+...-..|+.|+.++..
T Consensus 14 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 41 (58)
T 1jo8_A 14 DNELTFVENDKIINIEFVDDDWWLGELE 41 (58)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCCcccCCCCEEEEEEecCCCcEEEEEC
Confidence 3456789999998887667889999876
No 119
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=40.92 E-value=69 Score=24.18 Aligned_cols=24 Identities=17% Similarity=0.481 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Q 022567 9 IEELFSNLSTYKEQLQQVRELLVH 32 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL~~ 32 (295)
+.+++..|..|+.|++++|..|..
T Consensus 14 v~~fe~rL~~Yr~~IeelE~~L~s 37 (93)
T 3t98_B 14 VQQFEVQLQQYRQQIEELENHLAT 37 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999999999999976
No 120
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=40.28 E-value=48 Score=21.83 Aligned_cols=28 Identities=29% Similarity=0.614 Sum_probs=22.3
Q ss_pred CCCCCCCCCCeEEEEE-cCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVY-SEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~-s~Dg~wY~A~I~ 122 (295)
+....++.||.+...- ..|+.|+.++..
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~ 47 (63)
T 3eg3_A 19 DNTLSITKGEKLRVLGYNHNGEWCEAQTK 47 (63)
T ss_dssp SSBCCBCTTCEEEEEEECTTSSEEEEEET
T ss_pred CCccCCCCCCEEEEEEeCCCCCeEEEEEC
Confidence 4456799999998887 557889999873
No 121
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=39.96 E-value=40 Score=27.15 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=42.8
Q ss_pred CCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCc--eEEEEecCCC--EEEEcCCCcccCCc
Q 022567 97 QEKLAVGTKVQAVYSEDGEWYDATIEAITPNG--YYVTYDSWGN--KEEVDPANVRPVNL 152 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~--~~V~F~~Ygn--~e~V~~~~lrp~~~ 152 (295)
...+.+||.+... ++.=.=+.|+|..++.+. +.|.+..+|. ..+|++++|+++..
T Consensus 89 ~~~~~~Gd~VrI~-~Gpf~g~~g~V~~vd~~k~~v~V~v~~~gr~tpvel~~~~v~~i~~ 147 (152)
T 3p8b_B 89 VSGLEPGDLVEVI-AGPFKGQKAKVVKIDESKDEVVVQFIDAIVPIPVTIKGDYVRLISK 147 (152)
T ss_dssp TTTCCTTCEEEEC-SSTTTTCEEEEEEEETTTTEEEEEESSCSSCCEEEEEGGGEEEEEC
T ss_pred cccCCCCCEEEEe-eecCCCCEEEEEEEeCCCCEEEEEEEecceeEEEEECHHHEEEecc
Confidence 4578999999988 233334689999999664 8888888885 47899999998743
No 122
>1v6z_A Hypothetical protein TTHA0657; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.00A {Thermus thermophilus HB8} SCOP: b.122.1.2 c.116.1.5 PDB: 2cx8_A* 2z0y_A*
Probab=39.76 E-value=39 Score=29.36 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=26.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEe
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYD 134 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~ 134 (295)
.-.++||.+... .++| +|.|+|..++. .+.+...
T Consensus 27 lRl~~Gd~v~l~-dg~g-~~~a~i~~~~~-~~~~~i~ 60 (228)
T 1v6z_A 27 LRARVGDRFTVF-DGER-EALAEVVDLGP-PLRYRVL 60 (228)
T ss_dssp SCCCTTCEEEEE-CSSC-EEEEEEEECCS-SCEEEEE
T ss_pred ccCCCCCEEEEE-eCCc-EEEEEEEECCC-eEEEEEE
Confidence 357899998876 5789 99999999988 7555443
No 123
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=39.34 E-value=48 Score=22.49 Aligned_cols=29 Identities=17% Similarity=0.401 Sum_probs=22.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+..-.++.||.+...-..|..|+.+++..
T Consensus 21 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (68)
T 1tg0_A 21 EDDLNFEKDQEIIVTSVEDAEWYFGEYQD 49 (68)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEEEC
T ss_pred cCCCCCCCCCEEEEEEecCCCeEEEEECC
Confidence 45567899999888775677899998864
No 124
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=38.57 E-value=48 Score=22.87 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+..-.++.||.+...-..|..|+.+++.
T Consensus 20 ~~ELs~~~Gd~i~v~~~~~~gWw~g~~~ 47 (65)
T 2lj0_A 20 DDELELRDGDIVDVMEKCDDGWFVGTSR 47 (65)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred cCCcCCCCCCEEEEeEeCCCCEEEEEEC
Confidence 4556799999998877557779988864
No 125
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=38.27 E-value=58 Score=21.58 Aligned_cols=29 Identities=10% Similarity=0.391 Sum_probs=23.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+....++.||.+...-..|+.|+.++...
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 43 (65)
T 2oaw_A 15 PREVTMKKGDILTLLNSTNKDWWKVEVKI 43 (65)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEEEE
T ss_pred CCCCCCCCCCEEEEEEcCCCCEEEEEEcc
Confidence 34567899999998887678899998874
No 126
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=37.89 E-value=55 Score=21.58 Aligned_cols=28 Identities=18% Similarity=0.468 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.++..
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (61)
T 1y0m_A 17 EDELTFTKSAIIQNVEKQDGGWWRGDYG 44 (61)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCCcCCcCCCEEEEEEecCCCEEEEEEC
Confidence 4456789999998887667789999763
No 127
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=37.48 E-value=82 Score=21.08 Aligned_cols=37 Identities=32% Similarity=0.490 Sum_probs=23.7
Q ss_pred ccCHHHHHHHHHHHHHHHHH-----HHHHhccCCCChhHHHHHHHHH
Q 022567 6 ELSIEELFSNLSTYKEQLQQ-----VRELLVHDPGNSEYADMEKELS 47 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~q-----Ve~aL~~DP~N~ELl~Lk~dL~ 47 (295)
-+++++|+.+|++.+.=|++ |...| +.|...|..++.
T Consensus 3 ~m~~eeL~~DL~El~~Ll~~AkR~rVk~~L-----~~ei~~lE~ei~ 44 (50)
T 2a26_A 3 HMASEELQKDLEEVKVLLEKATRKRVRDAL-----TAEKSKIETEIK 44 (50)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCSHHHHHHH-----HHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhccHHHHHHH-----HHHHHHHHHHHH
Confidence 36788999999888876665 55555 234555544444
No 128
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=37.39 E-value=58 Score=21.11 Aligned_cols=27 Identities=15% Similarity=0.405 Sum_probs=22.0
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|..|+.++.
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 2vwf_A 16 DGELGFRRGDFIHVMDNSDPNWWKGAC 42 (58)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 345678999999988866778999987
No 129
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=36.85 E-value=61 Score=20.99 Aligned_cols=28 Identities=11% Similarity=0.471 Sum_probs=22.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+..-.++.||.+...-..|..|+.++..
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 43 (58)
T 1sem_A 16 SGELAFKRGDVITLINKDDPNWWEGQLN 43 (58)
T ss_dssp TTBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred CCCcCCCCCCEEEEEEecCCCEEEEEEC
Confidence 3456789999999888667789999873
No 130
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=36.85 E-value=60 Score=21.10 Aligned_cols=27 Identities=15% Similarity=0.454 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|+.|+.++.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 1uti_A 15 EDELGFRSGEVVEVLDSSNPSWWTGRL 41 (58)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cCCCCCCCCCEEEEEEECCCCEEEEEE
Confidence 345678999999888766788999986
No 131
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=36.00 E-value=23 Score=26.49 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCChhHH-HHHHHHHH
Q 022567 11 ELFSNLSTYKEQLQQVRELLVHDPGNSEYA-DMEKELSE 48 (295)
Q Consensus 11 ~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl-~Lk~dL~E 48 (295)
.|+....++..+|..-..+|+.||+|+-|| .++.-|.|
T Consensus 18 ~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 18 TFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 466677788999999999999999998764 44444444
No 132
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=35.95 E-value=70 Score=25.51 Aligned_cols=30 Identities=20% Similarity=0.099 Sum_probs=23.1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 022567 33 DPGNSEYADMEKELSEVIALTEELLATAKQ 62 (295)
Q Consensus 33 DP~N~ELl~Lk~dL~EvI~Lt~ell~~~~~ 62 (295)
.|.++||..+..||...|.-.+.-|..+..
T Consensus 59 ~~s~~E~~~~~~EL~~~l~sie~dLeDLe~ 88 (130)
T 4dnd_A 59 AVGREELDWTTNELRNGLRSIEWDLEDLEE 88 (130)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999988887753
No 133
>2eqs_A ATP-dependent RNA helicase DHX8; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.83 E-value=50 Score=24.79 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=27.3
Q ss_pred CcEEEEEEeeEeCCceEEEEecC--CCEEEEcCCCc
Q 022567 114 GEWYDATIEAITPNGYYVTYDSW--GNKEEVDPANV 147 (295)
Q Consensus 114 g~wY~A~I~~i~~~~~~V~F~~Y--gn~e~V~~~~l 147 (295)
|..|.|+|..|.+.|+-|.+.+| +-.-.|..++|
T Consensus 13 G~i~~G~V~~v~~fG~FV~l~~~~~~~~Glvhisel 48 (103)
T 2eqs_A 13 GDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL 48 (103)
T ss_dssp TCEEEEEEEEECSSCEEEEECSSSSCCEEEECGGGT
T ss_pred CCEEEEEEEEEeccEEEEEEcCCCCCeEEEEEHHHC
Confidence 66799999999988888888876 55567777777
No 134
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=35.70 E-value=55 Score=22.46 Aligned_cols=27 Identities=19% Similarity=0.430 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|+.|+.+++
T Consensus 17 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (68)
T 2ew3_A 17 QGELGFKEGDIITLTNQIDENWYEGMI 43 (68)
T ss_dssp TTBCCBCTTCEEEEEEESSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEE
Confidence 345678999999888766788999986
No 135
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=35.64 E-value=58 Score=21.44 Aligned_cols=28 Identities=11% Similarity=0.327 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+..-.++.||.+...-..|+.|+.+++.
T Consensus 18 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 45 (60)
T 1w70_A 18 KLELNFKAGDVIFLLSRINKDWLEGTVR 45 (60)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred CCCccCCCCCEEEEEEeCCCCeEEEEEC
Confidence 3456789999988887667889999853
No 136
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=35.42 E-value=63 Score=21.39 Aligned_cols=28 Identities=18% Similarity=0.450 Sum_probs=22.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.++..
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 46 (62)
T 1uj0_A 19 DNELTFKHGELITVLDDSDANWWQGENH 46 (62)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred cCCcCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 3456789999998888667889999864
No 137
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=35.39 E-value=61 Score=22.11 Aligned_cols=28 Identities=25% Similarity=0.569 Sum_probs=22.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.++..
T Consensus 29 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 56 (73)
T 3h0h_A 29 EDDLSFHKGEKFQILNSSEGDWWEARSL 56 (73)
T ss_dssp TTBCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred CCcceEeCCCEEEEEEecCCCeEEEEEC
Confidence 4556799999999888667889999874
No 138
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=34.88 E-value=75 Score=26.37 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=28.2
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEE
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTY 133 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F 133 (295)
..+.+|+.+.+. ..||.-++++|.+|+++.++|=|
T Consensus 111 ~~~~~G~~~~~~-~~~G~~~~~~V~~v~~~~V~vD~ 145 (169)
T 4dt4_A 111 GEPEIGAIMLFT-AMDGSEMPGVIREINGDSITVDF 145 (169)
T ss_dssp CCCCTTCEEEEE-CTTSCEEEEEEEEEETTEEEEEC
T ss_pred CCCCCCcEEEEE-CCCCCEEEEEEEEEcCCEEEEeC
Confidence 458999999887 46899999999999876566544
No 139
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=34.75 E-value=77 Score=21.34 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..||.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2djq_A 21 PGDLKFNKGDVILLRRQLDENWYQGEI 47 (68)
T ss_dssp TTCCCCCTTCEEEEEECCCSSEEEEEE
T ss_pred cCCccCCCCCEEEEEEecCCCEEEEEE
Confidence 455679999999888766788999984
No 140
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=34.64 E-value=67 Score=21.01 Aligned_cols=27 Identities=11% Similarity=0.380 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 46 (62)
T 3ngp_A 20 PRELTVKKGDILTLLNSTNKDWWKIEV 46 (62)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCccCCCCCEEEEeEecCCCeEEEEE
Confidence 445679999999998876788999975
No 141
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=34.63 E-value=66 Score=20.78 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..+..|+.++..
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 42 (58)
T 1zuy_A 15 PSELPLKKGDVIYITREEPSGWSLGKLL 42 (58)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEES
T ss_pred CCcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 3456789999988887656779999876
No 142
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=34.52 E-value=56 Score=21.61 Aligned_cols=27 Identities=19% Similarity=0.409 Sum_probs=21.0
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (62)
T 2fpe_A 17 EDELELEVDDPLLVELQAEDYWYEAYN 43 (62)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCcCcCCCCCEEEEEEecCCCEEEEEE
Confidence 445678999998887766778998874
No 143
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=34.31 E-value=50 Score=35.07 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=43.0
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCCc
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
.|..|..|-... ++..|-.|+|.+..++.++|...+-|...+|+.++|.|+++
T Consensus 4 ~~~~~~~vwv~~-~~~~~~~~~v~~~~~~~~~v~~~~~~~~~~v~~~~~~~~np 56 (995)
T 2ycu_A 4 EWTARRLVWVPS-ELHGFEAAALRDEGEEEAEVELAESGRRLRLPRDQIQRMNP 56 (995)
T ss_dssp CCGGGCEEEEEE-TTTEEEEEEEEEECSSEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred cccCCCeEEEEC-CCCceEEEEEEEecCCeEEEEECCCCeEEEeeHHHcccCCC
Confidence 488899988775 36789999999975545999998877778899999988754
No 144
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=34.31 E-value=64 Score=20.85 Aligned_cols=26 Identities=12% Similarity=0.376 Sum_probs=20.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~ 120 (295)
+..-.++.||.+...-..|+.|+.++
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~ 40 (57)
T 1cka_A 15 EEDLPFKKGDILRIRDKPEEQWWNAE 40 (57)
T ss_dssp TTBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCCCCCCCCCEEEEEEecCCCcEEEE
Confidence 34567899999988876678899887
No 145
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=34.04 E-value=68 Score=21.26 Aligned_cols=28 Identities=11% Similarity=0.306 Sum_probs=22.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.+++.
T Consensus 23 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 50 (65)
T 3ulr_B 23 DDEISFDPDDIITNIEMIDDGWWRGVCK 50 (65)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred cCEeeEecCCEEEEEEecCCCEEEEEEC
Confidence 4456799999999887667789999853
No 146
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=33.93 E-value=1.3e+02 Score=22.84 Aligned_cols=39 Identities=18% Similarity=0.353 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHh-------ccCCCChhHHHHHHHH
Q 022567 8 SIEELFSNLSTYKEQLQQVRELL-------VHDPGNSEYADMEKEL 46 (295)
Q Consensus 8 s~e~Le~~L~~Yk~QL~qVe~aL-------~~DP~N~ELl~Lk~dL 46 (295)
+|++|+.+|...+.||-.-..=| ..|||.-....|..-=
T Consensus 6 ~i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~ 51 (96)
T 2ic9_A 6 TLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRR 51 (96)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 38899999988888886554444 5699987777776543
No 147
>3u5e_h 60S ribosomal protein L35-A, 60S ribosomal protein L33-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 1s1i_X 2wwa_N 2ww9_N 3izc_c 3izs_c 2wwb_N 3o5h_c 3o58_c 3u5i_h 4b6a_h
Probab=33.81 E-value=1.7e+02 Score=23.10 Aligned_cols=51 Identities=22% Similarity=0.311 Sum_probs=41.7
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHH
Q 022567 5 EELSIEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIALTEE 55 (295)
Q Consensus 5 e~~s~e~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI~Lt~e 55 (295)
-++|.+||..+|.+.+..|-++.-.....+-...+..++.|+--|..+..+
T Consensus 10 R~~s~eEL~~~L~eLK~ELf~LRfq~atgql~~~Ir~vRR~IARi~Tvl~e 60 (120)
T 3u5e_h 10 RTKSKEQLASQLVDLKKELAELKVQKLSRPSLPKIKTVRKSIACVLTVINE 60 (120)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHTTSSCCTHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999887776555478899999999887766554
No 148
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=33.67 E-value=63 Score=21.86 Aligned_cols=26 Identities=12% Similarity=0.376 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~ 120 (295)
+....++.||.+...-..|+.|+.++
T Consensus 17 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~ 42 (65)
T 1b07_A 17 EEDLPFKKGDILRIRDKPEEQWWNAE 42 (65)
T ss_dssp TTBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCccCCcCCCEEEEEEecCCCeEEEE
Confidence 34567899999988887678899987
No 149
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=33.49 E-value=74 Score=20.67 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 43 (58)
T 1zlm_A 17 PDELYFEEGDIIYITDMSDTNWWKGTS 43 (58)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 445678999999988766778999986
No 150
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=33.39 E-value=94 Score=22.27 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=35.6
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEE-EEcCCCccc
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKE-EVDPANVRP 149 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e-~V~~~~lrp 149 (295)
..|++||.|...- +.-.=--+.|..|.++ +.+.|.+-.+.| .|...+|+-
T Consensus 16 K~F~~GDHVkVi~-G~~~getGlVV~v~~d-~v~v~SD~t~~Ei~V~~~dL~~ 66 (69)
T 2do3_A 16 KYFKMGDHVKVIA-GRFEGDTGLIVRVEEN-FVILFSDLTMHELKVLPRDLQL 66 (69)
T ss_dssp SSCCTTCEEEESS-STTTTCEEEEEEECSS-CEEEEESSSCSEEEECTTSEEE
T ss_pred eeccCCCeEEEec-cEEcCceEEEEEEeCC-EEEEEeCCCCCEEEEEhHHhhh
Confidence 5799999999983 2222236788888644 777788877765 777777763
No 151
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=32.95 E-value=1e+02 Score=23.85 Aligned_cols=52 Identities=21% Similarity=0.348 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------hccCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 022567 9 IEELFSNLSTYKEQLQQVREL-------LVHDPGNSEYADMEKELSEVIALTEELLATAK 61 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~a-------L~~DP~N~ELl~Lk~dL~EvI~Lt~ell~~~~ 61 (295)
|++|+.+|...+.||-.-..= ...|||.-....|+.-=.+ ++..++=|+.++
T Consensus 37 ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~-Vsalq~KiaeLK 95 (107)
T 2k48_A 37 LQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAA-VSTLETKLGELK 95 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 678888888888887654444 4569998887777665433 333344444443
No 152
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=32.78 E-value=68 Score=22.66 Aligned_cols=28 Identities=25% Similarity=0.569 Sum_probs=22.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.||.++..
T Consensus 19 ~~eLs~~~Gd~i~vl~~~~~~Ww~g~~~ 46 (79)
T 3cqt_A 19 EDDLSFHKGEKFQILNSSEGDWWEARSL 46 (79)
T ss_dssp TTBCCBCTTCEEEEEECTTSSEEEEEET
T ss_pred cCcCCCCCCCEEEEEEecCCCeEEEEEC
Confidence 4456789999999887667889999874
No 153
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=32.65 E-value=70 Score=20.81 Aligned_cols=27 Identities=33% Similarity=0.506 Sum_probs=21.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|..|+.++.
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (58)
T 1zx6_A 16 DGDLGLKPGDKVQLLEKLSPEWYKGSC 42 (58)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCCccCCCCCEEEEEEecCCCEEEEEE
Confidence 445678999998888765777999986
No 154
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=32.43 E-value=73 Score=20.80 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|..|+.++.
T Consensus 18 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 44 (59)
T 2g6f_X 18 EDELSFSKGDVIHVTRVEEGGWWEGTH 44 (59)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 445678999998887766778999975
No 155
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=32.21 E-value=81 Score=20.36 Aligned_cols=27 Identities=7% Similarity=0.388 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 43 (58)
T 2drm_A 17 GDELTFKEGDTIIVHQKDPAGWWEGEL 43 (58)
T ss_dssp TTBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred cCCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 345678999998888766788999886
No 156
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=32.20 E-value=1.2e+02 Score=22.23 Aligned_cols=52 Identities=19% Similarity=0.323 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-------ccCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 022567 9 IEELFSNLSTYKEQLQQVRELL-------VHDPGNSEYADMEKELSEVIALTEELLATAK 61 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL-------~~DP~N~ELl~Lk~dL~EvI~Lt~ell~~~~ 61 (295)
|++|+.+|...+.||-.-..=| ..|||.-....|..-=.+ ++..++=|..++
T Consensus 7 l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~~~~~R~~~-V~~lq~Ki~elk 65 (78)
T 2ic6_A 7 LKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAA-VSALETKLGELK 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 7889998888888876554444 569998777777654333 333344444443
No 157
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=32.14 E-value=71 Score=22.29 Aligned_cols=48 Identities=17% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
+....++.||.+...-..|..||.+++..-.. -+..-.++...|.++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~---------~~~~G~fP~~yv~~~~ 68 (80)
T 1ue9_A 21 SEQLSLAPGQLILILKKNTSGWWQGELQARGK---------KRQKGWFPASHVKLLG 68 (80)
T ss_dssp TTBCCCCTTCEEEEEEECSSSEEEEEECSCCS---------SCCEEEEETTSEEECC
T ss_pred CCCCCCCCCCEEEEEEecCCCcEEEEECCCCC---------CCcEEEEchHHeEECC
Confidence 45567999999888875577799998763110 0123456666666663
No 158
>1luz_A Protein K3, protein K2; stranded anti-parallel beta barrel, viral protein; 1.80A {Vaccinia virus} SCOP: b.40.4.5
Probab=31.95 E-value=61 Score=23.71 Aligned_cols=35 Identities=6% Similarity=0.106 Sum_probs=28.1
Q ss_pred CCcEEEEEEeeEeCCceEEEEecC-CCEEEEcCC-Ccc
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSW-GNKEEVDPA-NVR 148 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Y-gn~e~V~~~-~lr 148 (295)
=|.-|.++|. |++-|+-|.+.+| |-.-.|..+ +|.
T Consensus 11 vG~~~~G~V~-v~~fG~FVel~~~~~~eGLvhis~el~ 47 (88)
T 1luz_A 11 AGDVIKGRVY-EKDYALYIYLFDYPHFEAILAESVKMH 47 (88)
T ss_dssp TTCEEEEEEE-EETTEEEEEETTCTTSEEEEGGGSSCC
T ss_pred CCCEEEEEEE-EEccEEEEEECCCCCeEEEEEeeHHhC
Confidence 4788999999 9999988999887 455677777 663
No 159
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=31.92 E-value=74 Score=20.82 Aligned_cols=27 Identities=4% Similarity=0.356 Sum_probs=21.7
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|..|+.++.
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (60)
T 2xmf_A 19 TDELSFNANDIIDIIKEDPSGWWTGRL 45 (60)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCCcCCCCCCEEEEEEecCCCEEEEEE
Confidence 455678999998888766777999987
No 160
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=31.83 E-value=48 Score=26.25 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=36.0
Q ss_pred CCCCCCeEEEEEc-CCCcEEEEEEeeEeCCc--------eEEEEecCCCEEEEcCCCcccCCc
Q 022567 99 KLAVGTKVQAVYS-EDGEWYDATIEAITPNG--------YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 99 ~~kvGd~C~A~~s-~Dg~wY~A~I~~i~~~~--------~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
.+-+|-.|+.-.. .-+.||||.|.+-+.+. |.|+=--=|---+|+..+|+-+..
T Consensus 10 de~lGkVV~V~~~~kk~~WfPALVVsPs~~d~v~vkKd~~LVRSFkDgKf~sV~rkdv~e~~~ 72 (117)
T 2yrv_A 10 DELLGKVVSVVSATERTEWYPALVISPSCNDDITVKKDQCLVRSFIDSKFYSIARKDIKEVDI 72 (117)
T ss_dssp CSSTTSEEEEECSSCSSCEEEEEEECCSSCSSCCCCTTCEEEEESSSCCEEEECTTTEECCCS
T ss_pred HHHcCcEEEEecCCCCCceeeeEEECCCCCCCeeeccceEEEEeeccCeEEEEEhHhhhhccc
Confidence 3568888877663 23689999998655332 444322224457899999998854
No 161
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=31.73 E-value=72 Score=20.96 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.++..
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 47 (64)
T 4f14_A 20 EDEVSFRDGDYIVNVQPIDDGWMYGTVQ 47 (64)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEET
T ss_pred CCcCCCCCCCEEEEEEeCCCCeEEEEEC
Confidence 3456799999988887657789999874
No 162
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.44 E-value=67 Score=22.17 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=23.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+....++.||.+...-..|..|+.++...
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (77)
T 2d8j_A 21 AEDLSFRAGDKLQVLDTSHEGWWLARHLE 49 (77)
T ss_dssp SSBCCBCTTCCEEEEECCSSSEEEEEECS
T ss_pred CCccCCCCCCEEEEEECCCCCeEEEEECC
Confidence 34567899999999886678899998873
No 163
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.42 E-value=75 Score=22.19 Aligned_cols=27 Identities=11% Similarity=0.303 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.+++
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 57 (79)
T 1x69_A 31 DDEISFDPDDIITNIEMIDDGWWRGVC 57 (79)
T ss_dssp SSBCCCCTTCEEEEEEECSSSEEEEEE
T ss_pred CCCcCcCCCCEEEEeEecCCCeEEEEE
Confidence 455679999998888765778999885
No 164
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=31.36 E-value=1.4e+02 Score=27.97 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=24.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcc
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLVH 32 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~~ 32 (295)
..++++|..++.++...|..|+..|..
T Consensus 290 kv~~~~l~~d~~~L~~~l~~v~~~l~~ 316 (411)
T 1ux5_A 290 KVSIEQLVNDCKDFSQSIVNVERSVEI 316 (411)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999998863
No 165
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=31.35 E-value=72 Score=25.74 Aligned_cols=36 Identities=14% Similarity=0.352 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHH
Q 022567 8 SIEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKEL 46 (295)
Q Consensus 8 s~e~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL 46 (295)
+++.|++++++.+.+|.+....| |+..|+-.|=.+|
T Consensus 16 ~L~~l~~ql~~l~~~l~~l~~~L---P~~~em~~LL~~i 51 (147)
T 2rjz_A 16 NLEAYKAQMKEMEESFGALLRQL---PSDTEVPGLLEDI 51 (147)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTT---TGGGHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHH
Confidence 34555555555555555554444 5555555444443
No 166
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=31.32 E-value=72 Score=21.46 Aligned_cols=26 Identities=19% Similarity=0.369 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~ 120 (295)
+....++.||.+...-..|+.|+.++
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~ 41 (67)
T 1gl5_A 16 AHDLRLERGQEYIILEKNDLHWWRAR 41 (67)
T ss_dssp SSBCCBCTTCEEEEEECSSSSEEEEE
T ss_pred CCeecCCcCCEEEEEEccCCCcEEEE
Confidence 34567899999998886678899987
No 167
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=31.12 E-value=72 Score=21.52 Aligned_cols=27 Identities=11% Similarity=0.550 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (69)
T 4esr_A 20 SDELTIHRGDIIRVFFKDNEDWWYGSI 46 (69)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred cCcCCCCCCCEEEEEEecCCCeEEEEe
Confidence 445679999998888765777999976
No 168
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=31.03 E-value=82 Score=21.26 Aligned_cols=27 Identities=7% Similarity=0.283 Sum_probs=21.4
Q ss_pred CCCCCCCCCCeEEEEEcC---CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE---DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~---Dg~wY~A~I 121 (295)
+....++.||.+...-.. |..|+.+++
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 46 (69)
T 1wyx_A 17 PDELSFRKGDIMTVLEQDTQGLDGWWLCSL 46 (69)
T ss_dssp TTBCCBCTTCEEEEEETTGGGCTTEEEEEE
T ss_pred CCccCCcCCCEEEEeECCCCCCCCcEEEEE
Confidence 445678999999988765 577999985
No 169
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=30.85 E-value=24 Score=27.20 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=10.2
Q ss_pred HHHhccCCCChhHHHHHHHH
Q 022567 27 RELLVHDPGNSEYADMEKEL 46 (295)
Q Consensus 27 e~aL~~DP~N~ELl~Lk~dL 46 (295)
+.+|..||+|++...|+..|
T Consensus 124 ~~al~l~P~~~~~~~l~~~l 143 (150)
T 4ga2_A 124 ERAAKLFPGSPAVYKLKEQL 143 (150)
T ss_dssp HHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHhCcCCHHHHHHHHHH
Confidence 44555555555555554443
No 170
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=30.71 E-value=58 Score=27.01 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=26.8
Q ss_pred CCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEE
Q 022567 98 EKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTY 133 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F 133 (295)
..+.+|+.+.+. ..+|. ++++|.+|+++.++|=|
T Consensus 88 ~~~~~G~~~~~~-~~~G~-~~~~V~~v~~~~V~vD~ 121 (171)
T 2k8i_A 88 DELQVGMRFLAE-TDQGP-VPVEITAVEDDHVVVDG 121 (171)
T ss_dssp SCCCTTCEEEEE-ETTEE-EEEEEEEECSSEEEEES
T ss_pred cCccCCcEEEEE-CCCCc-EEEEEEEEcCCEEEEeC
Confidence 468999999987 45887 89999999876565544
No 171
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=30.68 E-value=86 Score=20.75 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 46 (64)
T 2ak5_A 20 EDELSFSKGDVIHVTRVEEGGWWEGTH 46 (64)
T ss_dssp TTBCCBCTTCEEEEEECCTTSEEEEEE
T ss_pred cCcccCCCCCEEEEeEecCCCEEEEEE
Confidence 445678999999888766788999975
No 172
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=30.50 E-value=79 Score=21.35 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.++..
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (69)
T 1ruw_A 17 SSELPLKKGDIVFISRDEPSGWSLAKLL 44 (69)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred CCcccCCCCCEEEEEEecCCCeEEEEEC
Confidence 4456789999988887557779998876
No 173
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=30.45 E-value=69 Score=21.85 Aligned_cols=27 Identities=19% Similarity=0.409 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (71)
T 2fpf_A 20 EDELELEVDDPLLVELQAEDYWYEAYN 46 (71)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcccCcCCcEEEEeEecCCCEEEEEE
Confidence 445678999998887766778998874
No 174
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=30.38 E-value=74 Score=21.86 Aligned_cols=27 Identities=19% Similarity=0.459 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|+.|+.+++
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 53 (73)
T 3c0c_A 27 DGELGFREGDLITLTNQIDENWYEGML 53 (73)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCCccCcCCCEEEEEEecCCCEEEEEE
Confidence 455678999998888766788999986
No 175
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.27 E-value=72 Score=22.87 Aligned_cols=28 Identities=18% Similarity=0.423 Sum_probs=22.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....|+.||.+..+-..|..||.++..
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~ 58 (88)
T 1x2q_A 31 DNELTFKHGEIIIVLDDSDANWWKGENH 58 (88)
T ss_dssp SSCCCCCSSCEEEEEECSCSSSEEEEET
T ss_pred cCccCCCCCCEEEEEEeCCCCEEEEEEC
Confidence 4556799999999888667889999764
No 176
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=29.85 E-value=1.5e+02 Score=27.71 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 022567 9 IEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIALTEELLAT 59 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI~Lt~ell~~ 59 (295)
++.|+++|++...+++.++..|...|++.=...-..+|++-|.-.+..|..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 299 (426)
T 1lrz_A 249 IKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEE 299 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999999999864544444555444444444433
No 177
>1f45_B Interleukin-12 alpha chain; cytokine, cytokine-cytokine complex; HET: NAG MAN; 2.80A {Homo sapiens} SCOP: a.26.1.1 PDB: 3hmx_B*
Probab=29.60 E-value=82 Score=27.04 Aligned_cols=48 Identities=19% Similarity=0.508 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 022567 8 SIEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSEVIALTEELLATA 60 (295)
Q Consensus 8 s~e~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~EvI~Lt~ell~~~ 60 (295)
.+...-++|.-|+..|+.+.+.|..||+.+=++. ..|+.-.+|++..+
T Consensus 101 CL~sIyEDLk~Y~~ef~A~~~~l~~dp~~Qi~Ld-----~~mL~aIdeLMQal 148 (197)
T 1f45_B 101 CLSSIYEDLKMYQVEFKTMNAKLLMDPKRQIFLD-----QNMLAVIDELMQAL 148 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCSHH-----HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhcc-----hhHHHHHHHHHHHh
Confidence 3455679999999999999999999999864432 34555556666655
No 178
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.52 E-value=91 Score=21.03 Aligned_cols=27 Identities=11% Similarity=0.452 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 2dl4_A 21 NEDLEMRPGDIITLLEDSNEDWWKGKI 47 (68)
T ss_dssp TTBCCCCTTCEEEEEECCCSSEEEEEC
T ss_pred cCCcCCCCCCEEEEEEeCCCCEEEEEE
Confidence 445679999999988866788999884
No 179
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=29.50 E-value=84 Score=20.73 Aligned_cols=27 Identities=19% Similarity=0.550 Sum_probs=21.0
Q ss_pred CCCCCCCCCCeEEEEEc-CCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYS-EDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s-~Dg~wY~A~I 121 (295)
+..-.++.||.+...-. .|+.|+.+++
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 42 (62)
T 2j6f_A 15 DDELTIRVGEIIRNVKKLQEEGWLEGEL 42 (62)
T ss_dssp TTBCCBCTTCEEEEEEECSSTTEEEEEE
T ss_pred cCCcCCcCCCEEEEEEecCCCCEEEEEE
Confidence 34567899999888765 5778999985
No 180
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.38 E-value=75 Score=22.31 Aligned_cols=28 Identities=11% Similarity=0.438 Sum_probs=22.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.+++.
T Consensus 24 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 51 (81)
T 2ysq_A 24 NRELAFKAGDVIKVLDASNKDWWWGQID 51 (81)
T ss_dssp SSSCCCCTTCEEEEEECCSSSEEEEECS
T ss_pred CCcCCCCCCCEEEEEEEcCcCEEEEEEC
Confidence 4456799999999988668889999853
No 181
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=29.29 E-value=41 Score=24.22 Aligned_cols=50 Identities=16% Similarity=0.477 Sum_probs=36.0
Q ss_pred CCCCCeEEEEEcCCCcEEE--EEEeeEeCCc----eEEEEec--CCC--EEEEcCCCcccC
Q 022567 100 LAVGTKVQAVYSEDGEWYD--ATIEAITPNG----YYVTYDS--WGN--KEEVDPANVRPV 150 (295)
Q Consensus 100 ~kvGd~C~A~~s~Dg~wY~--A~I~~i~~~~----~~V~F~~--Ygn--~e~V~~~~lrp~ 150 (295)
++.|+.|..+- .+--||. +.|.+|+..+ +.|+|.. |++ +-...+++|..+
T Consensus 2 i~rGs~VrIlr-~eSywy~~vG~V~~Vd~~~~~ypV~VrFekvNy~g~~TnnFal~ELe~v 61 (70)
T 1qp2_A 2 VQRGSKVRILR-PESYWFQDVGTVASVDQSGIKYPVIVRFEKVNYSGINTNNFAEDELVEV 61 (70)
T ss_dssp CCTTCEEEECC-TTSTTTTCEEEEEEECCSSCSCSEEEECSSCCSSCCSEEEECGGGEEEC
T ss_pred cCCCCEEEEcC-ccceeecceeEEEEEeCCCcEeeEEEEecccccccccccccChhHeeEe
Confidence 57899999985 4677875 7888998766 8999987 443 333666666654
No 182
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=29.12 E-value=1e+02 Score=22.78 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHH
Q 022567 9 IEELFSNLSTYKEQLQQVRELLVHDPGNSEYADMEKELSE 48 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe~aL~~DP~N~ELl~Lk~dL~E 48 (295)
+++|+++..+|+-.|..-- +||..|+..|.+
T Consensus 35 v~elEnErlQyEkKLKsTK---------~El~~Lq~qLe~ 65 (81)
T 3qh9_A 35 VEELENERNQYEWKLKATK---------AEVAQLQEQVAL 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhH---------HHHHHHHHHHHh
Confidence 4566777777766665443 566666666553
No 183
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=29.04 E-value=50 Score=24.76 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHhccCCCChh
Q 022567 16 LSTYKEQLQQVRELLVHDPGNSE 38 (295)
Q Consensus 16 L~~Yk~QL~qVe~aL~~DP~N~E 38 (295)
+..|..=+...+.+|..+|+|.+
T Consensus 65 ~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 65 LGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HhhHHHHHHHHHHHHhcCCCCcH
Confidence 33444444445555555555544
No 184
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=28.85 E-value=86 Score=21.98 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
.....++.||.+...-..|+.|+.++.
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 42 (80)
T 2pqh_A 16 PREVTMKKGDILTLLNSTNKDWWKVEV 42 (80)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEE
Confidence 345678999999988866777999877
No 185
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=28.80 E-value=99 Score=20.12 Aligned_cols=27 Identities=7% Similarity=0.384 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcC--CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE--DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~--Dg~wY~A~I 121 (295)
+..-.++.||.+...-.. +..|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~ 45 (60)
T 1oot_A 17 SGDLPFRKGDVITILKKSDSQNDWWTGRV 45 (60)
T ss_dssp TTBCCBCTTCEEEEEECCSCTTSEEEEEE
T ss_pred cCEeeEcCCCEEEEEEeCCCCCCeEEEEE
Confidence 445678999999888754 577999987
No 186
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=28.77 E-value=90 Score=21.20 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=21.7
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..||.+++
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (73)
T 3thk_A 19 PREVTMKKGDILTLLNSTNKDWWKVEV 45 (73)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccCCCCCCEEEEEECCCCCeEEEEE
Confidence 445679999999998866777999974
No 187
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=28.71 E-value=83 Score=21.22 Aligned_cols=28 Identities=18% Similarity=0.533 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..||.+++.
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 54 (72)
T 4glm_A 27 PNELDFEVGDKIRILATLEDGWLEGSLK 54 (72)
T ss_dssp TTBCCBCTTCEEEEEEECSTTEEEEEET
T ss_pred CCcCCCCCCCEEEEEEccCCCEEEEEEC
Confidence 4556799999988887557779999853
No 188
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=28.58 E-value=85 Score=21.04 Aligned_cols=27 Identities=22% Similarity=0.303 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 47 (68)
T 2dl3_A 21 LKELPLQKGDIVYIYKQIDQNWYEGEH 47 (68)
T ss_dssp TTBCCBCTTCEEEEEECCSTTEEEEEC
T ss_pred cCCccCCCCCEEEEeEecCCCEEEEEE
Confidence 445678999999988766788999983
No 189
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens}
Probab=28.55 E-value=29 Score=27.66 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=38.4
Q ss_pred CC-CCCCeEEEEEc--CCCcEEE--EEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCC
Q 022567 99 KL-AVGTKVQAVYS--EDGEWYD--ATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 99 ~~-kvGd~C~A~~s--~Dg~wY~--A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
.| .+|=.|..+.. .|| ||. |+|.+|.+.+ |.|.+.+-|....|.-++|-+..
T Consensus 13 ~Wl~~~I~Vrii~k~~~~g-~y~~KgvV~~V~~~~~c~V~l~~~g~~v~v~q~~LETVi 70 (127)
T 2ckk_A 13 YWLQPEIIVKIITKKLGEK-YHKKKAIVKEVIDKYTAVVKMIDSGDKLKLDQTHLETVI 70 (127)
T ss_dssp CCCCTTBEEEECCSTTCGG-GTTCEEEEEEEETTTEEEEEETTTCCEEEEEGGGEEECC
T ss_pred CcccCCeEEEEEEccCCCc-ccCceEEEEEecCCCeEEEEECCCCCEEEEchHHcEEec
Confidence 35 66666766652 234 887 8999997666 99999888877778888887763
No 190
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=28.40 E-value=68 Score=21.56 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=22.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+..-.++.||.+...-..|+.|+.++...
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 48 (67)
T 2o9s_A 20 QVEMSFRKGERITLLRQVDENWYEGRIPG 48 (67)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEECTT
T ss_pred cCccCCCCCCEEEEEEecCCCEEEEEECC
Confidence 44567899999888876677899998765
No 191
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=28.37 E-value=97 Score=20.85 Aligned_cols=28 Identities=11% Similarity=0.424 Sum_probs=22.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.++..
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (69)
T 2dil_A 22 PDELDLSAGDILEVILEGEDGWWTVERN 49 (69)
T ss_dssp SSSCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred cCccCCCCCCEEEEEECCCCCEEEEEEC
Confidence 4556789999999988667779998863
No 192
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=28.28 E-value=89 Score=20.14 Aligned_cols=27 Identities=19% Similarity=0.403 Sum_probs=20.9
Q ss_pred CCCCCCCCCCeEEEEEcCC-CcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSED-GEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~D-g~wY~A~I 121 (295)
+....++.||.+...-..| ..|+.++.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 42 (58)
T 1zuu_A 15 DDEITITPGDKISLVARDTGSGWTKINN 42 (58)
T ss_dssp TTBCCBCTTCCEEEEECCSSSSEEEEEE
T ss_pred CCcccCCCCCEEEEeEcCCCCCCEEEEE
Confidence 4456789999998887555 47999987
No 193
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=28.06 E-value=96 Score=21.26 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=21.0
Q ss_pred CCCCCCCCCCeEEEEEcC--CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE--DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~--Dg~wY~A~I 121 (295)
+....++.||.+...-.. |+.|+.++.
T Consensus 16 ~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~ 44 (69)
T 2ydl_A 16 DDELTIKEGDIVTLINKDCIDVGWWEGEL 44 (69)
T ss_dssp TTBCCBCTTCEEEEEESCCSSTTEEEEEE
T ss_pred CCccccCCCCEEEEEEcCCCCCCEEEEEE
Confidence 345678999999988753 677999985
No 194
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.05 E-value=98 Score=20.82 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2k_A 21 PDELYFEEGDIIYITDMSDTNWWKGTS 47 (68)
T ss_dssp TTBCCCCSSCEEEEEECSCSSEEEEES
T ss_pred CCcccCCCCCEEEEEEcCCCCEEEEEE
Confidence 445678999999988766788999975
No 195
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=27.83 E-value=1e+02 Score=20.79 Aligned_cols=28 Identities=14% Similarity=0.402 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEEcC-CCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSE-DGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~-Dg~wY~A~I~ 122 (295)
+....++.||.+...-.. +..|+.++..
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~ 48 (71)
T 2jt4_A 20 QDELTIKSGDKVYILDDKKSKDWWMCQLV 48 (71)
T ss_dssp TTBCCBCTTCEEEEEESSSCSSEEEEEET
T ss_pred CCcccCCCCCEEEEEECCCCCCCEEEEEC
Confidence 445678999999888754 6779998873
No 196
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=27.80 E-value=87 Score=21.18 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.++.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (65)
T 2nwm_A 15 PKELTLQKGDIVYIHKEVDKNWLEGEH 41 (65)
T ss_dssp TTBCCBCTTCEEEEEECCTTTCEEEEE
T ss_pred cCccCCcCCCEEEEEEecCCCEEEEEE
Confidence 345678999998887766777999884
No 197
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=27.72 E-value=57 Score=27.12 Aligned_cols=26 Identities=23% Similarity=0.415 Sum_probs=21.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.+++||.+...-..|| ||+|.+
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~-W~~g~~ 56 (184)
T 3a98_A 31 APQLSLQIGDVVRIQETCGD-WYRGYL 56 (184)
T ss_dssp TTBCCBCTTCEEEEEEEETT-EEEEEE
T ss_pred CCCCCcCCCCEEEEEecCCC-EEEEEE
Confidence 45677999999888776577 999998
No 198
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=27.71 E-value=60 Score=22.53 Aligned_cols=29 Identities=28% Similarity=0.475 Sum_probs=22.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+....|+.||.+...-..|..|+.+++..
T Consensus 24 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~ 52 (76)
T 2ed1_A 24 DDELTFIEGEVIIVTGEEDQEWWIGHIEG 52 (76)
T ss_dssp SSBCCCCSSCEEEESSCCSSSEEEEEETT
T ss_pred cCCcCcCCCCEEEEEEecCCCEEEEEECC
Confidence 45567999999888765677899998643
No 199
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=27.48 E-value=87 Score=29.87 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=40.3
Q ss_pred CCCCCCCCeEEEE---EcCCCcEEEEEEeeEeCCc--eEEEEe--cCC----CEEEEcCCCcccCC
Q 022567 97 QEKLAVGTKVQAV---YSEDGEWYDATIEAITPNG--YYVTYD--SWG----NKEEVDPANVRPVN 151 (295)
Q Consensus 97 ~~~~kvGd~C~A~---~s~Dg~wY~A~I~~i~~~~--~~V~F~--~Yg----n~e~V~~~~lrp~~ 151 (295)
....++|+.|.|+ -.+++.|--|+|.++...+ |.|.=+ +=. ..-.|+..+|.|++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~y~v~d~~~~~~~~~~~~~~~~~~~~~~~p 450 (522)
T 3mp6_A 385 NAPILVGSEVAYKPRRGSADGEWIQCEVLKVVADGTRFEVRDPEPDELGNSGKVYKCNRKELLLIP 450 (522)
T ss_dssp CCCBCTTCEEEECCC-----CCEEEEEEEEEETTTTEEEEEECSCBTTBTTCEEEEECGGGEEEEC
T ss_pred ccccCCCCEEEEecCCCCCCCCEEEEEEEEEeCCCCEEEEeCCCCCCCCCCCeeEEccHHHEEECC
Confidence 3457999999997 3567899999999998554 999777 332 24578888888886
No 200
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=27.42 E-value=1e+02 Score=20.29 Aligned_cols=27 Identities=11% Similarity=0.497 Sum_probs=20.7
Q ss_pred CCCCCCCCCCeEEEEEcC--CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE--DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~--Dg~wY~A~I 121 (295)
+..-.++.||.+...-.. |..|+.+++
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 48 (64)
T 2jte_A 20 EDELTFREGEIIHLISKETGEAGWWKGEL 48 (64)
T ss_dssp SSBCCBCTTCEEEEEESCSSSTTEEEEEE
T ss_pred CCccCCCCCCEEEEEECCCCCCCEEEEEE
Confidence 445678999999888642 567999985
No 201
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.38 E-value=1e+02 Score=20.66 Aligned_cols=27 Identities=15% Similarity=0.332 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (68)
T 1x2p_A 21 ETQLSFLRGEKILILRQTTADWWWGER 47 (68)
T ss_dssp TTBCCCCTTCEEEEEECCSSSEEEEEC
T ss_pred cCCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 445678999999888766778999974
No 202
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.36 E-value=97 Score=21.48 Aligned_cols=27 Identities=7% Similarity=0.191 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (78)
T 2yuo_A 21 DDELGFRKNDIITIISQKDEHCWVGEL 47 (78)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCccCCCCCEEEEEEecCCCEEEEEE
Confidence 445678999999988866788988874
No 203
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=27.10 E-value=69 Score=21.06 Aligned_cols=28 Identities=7% Similarity=0.289 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.+++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 47 (60)
T 2gnc_A 20 ARELSFKKGASLLLYHRASEDWWEGRHN 47 (60)
T ss_dssp TTBCCBCTTCEEEEEEEEETTEEEEEET
T ss_pred cCCcCCCCCCEEEEEEecCCCEEEEEEC
Confidence 4456789999988877556779999873
No 204
>4a17_U RPL35, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_U 4a1c_U 4a1e_U
Probab=27.01 E-value=94 Score=24.77 Aligned_cols=50 Identities=16% Similarity=0.287 Sum_probs=39.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhccC--CCC-hhHHHHHHHHHHHHHHHHH
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLVHD--PGN-SEYADMEKELSEVIALTEE 55 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~~D--P~N-~ELl~Lk~dL~EvI~Lt~e 55 (295)
++|.+||..+|.+.+..|-++.-..... .+| ..+..++.|+--|..+..+
T Consensus 12 ~~s~eEL~~~L~eLK~ELf~LRfq~atggqlen~~rIr~vRRdIARi~Tvl~e 64 (124)
T 4a17_U 12 TQTEEQLVGELGKLQTELSQLRIAKIAGGTANKLGRIGIVRKAIAKYLTIINE 64 (124)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999987666554 344 6788899998887665554
No 205
>3j21_W 50S ribosomal protein L29P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.91 E-value=1.7e+02 Score=20.79 Aligned_cols=50 Identities=24% Similarity=0.439 Sum_probs=37.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhccCC--CC-hhHHHHHHHHHHHHHHHHH
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLVHDP--GN-SEYADMEKELSEVIALTEE 55 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~~DP--~N-~ELl~Lk~dL~EvI~Lt~e 55 (295)
++|.++|..+|.+.+..|-++.-.....+ +| ..+..++.++--|-....+
T Consensus 8 ~~s~~EL~~~L~elk~ELf~LR~q~atgq~l~n~~~ir~vRr~IARi~Tvl~e 60 (72)
T 3j21_W 8 EMSIEEIDAKIRELRLQLAKERGLLTMGTSLENPMVIRNLRRDIARLLTIKKE 60 (72)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999776665433 44 5678888888877655443
No 206
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=26.19 E-value=93 Score=22.19 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=22.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.++..
T Consensus 20 ~~eLsf~~Gd~i~vl~~~~~~Ww~g~~~ 47 (84)
T 4ag1_C 20 WTDLSFHKGEKFQILEFGPGDWWEARSL 47 (84)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCcccccCCCEEEEEEecCCCeEEEEEC
Confidence 4456799999998888667789999874
No 207
>2zkr_v 60S ribosomal protein L35; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.98 E-value=1.9e+02 Score=22.96 Aligned_cols=50 Identities=24% Similarity=0.319 Sum_probs=37.5
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhccC--CCC-hhHHHHHHHHHHHHHHHH
Q 022567 5 EELSIEELFSNLSTYKEQLQQVRELLVHD--PGN-SEYADMEKELSEVIALTE 54 (295)
Q Consensus 5 e~~s~e~Le~~L~~Yk~QL~qVe~aL~~D--P~N-~ELl~Lk~dL~EvI~Lt~ 54 (295)
-++|.+||..+|.+.+..|-++.-..... ++| ..+..++.|+--|.....
T Consensus 10 R~~s~eEL~~~L~eLK~ELf~LRfq~atgq~len~~rir~vRrdIARI~Tvl~ 62 (123)
T 2zkr_v 10 RGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 62 (123)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999976555443 344 567889999877665443
No 208
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=25.93 E-value=1.8e+02 Score=20.81 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--------CCCChhHHHHHHHHHHHHHHHHHHH
Q 022567 12 LFSNLSTYKEQLQQVRELLVH--------DPGNSEYADMEKELSEVIALTEELL 57 (295)
Q Consensus 12 Le~~L~~Yk~QL~qVe~aL~~--------DP~N~ELl~Lk~dL~EvI~Lt~ell 57 (295)
|+.+++.|+.+|..+++.|.. -.+..+|+.+|--|+-=|..=.-+|
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLL 56 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 56 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566666555554421 1223445555555544444433333
No 209
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=25.81 E-value=1.2e+02 Score=19.53 Aligned_cols=27 Identities=15% Similarity=0.441 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEEc-CCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYS-EDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s-~Dg~wY~A~I 121 (295)
+..-.++.||.+...-. .+..|+.++.
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 43 (60)
T 2v1q_A 16 QDELTIKSGDKVYILDDKKSKDWWMCQL 43 (60)
T ss_dssp TTBCCBCTTCEEEEEESSSCSSEEEEEE
T ss_pred CCCccCCCCCEEEEEeCCCCCCCEEEEE
Confidence 44567899999988875 4777999887
No 210
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=25.77 E-value=1e+02 Score=20.87 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=20.8
Q ss_pred CCCCCCCCCCeEEEEE-cCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVY-SEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~-s~Dg~wY~A~ 120 (295)
+....++.||.+...- ..|+.|+.++
T Consensus 25 ~~eLs~~~Gd~i~v~~~~~~~~Ww~g~ 51 (71)
T 1csk_A 25 EQDLPFCKGDVLTIVAVTKDPNWYKAK 51 (71)
T ss_dssp TTBCCBCTTCEEEEEEECSSTTEEEEE
T ss_pred CCcCCCCCCCEEEEeECCCCCCCEEEE
Confidence 4556789999988876 5677899988
No 211
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.70 E-value=81 Score=20.79 Aligned_cols=27 Identities=11% Similarity=0.299 Sum_probs=21.0
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+..-.++.||.+...-..|+.|+.++.
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 45 (62)
T 1k4u_S 19 PEDLEFQEGDIILVLSKVNEEWLEGES 45 (62)
T ss_dssp SSBCCBCSSCEEEEEEESSSSCEEEEC
T ss_pred CCCccCCCCCEEEEEEeCCCCEEEEEE
Confidence 345678999998888765777998884
No 212
>3oym_A PFV integrase, P42IN; protein-DNA complex; HET: DNA; 2.02A {Human spumaretrovirus} PDB: 3oyn_A* 3s3o_A* 4be2_A* 3l2q_A 3l2s_A 3l2r_A* 3l2u_A* 3l2v_A* 3l2w_A* 3l2t_A* 3os1_A* 3os2_A* 3os0_A* 3oya_A* 3oy9_A* 3oyc_A* 3oyd_A* 3oye_A* 3oyb_A* 3oyg_A* ...
Probab=25.65 E-value=65 Score=29.19 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=36.7
Q ss_pred CCCCCCCeEEEEEcCCCc----EE-EEEEeeEeCCc-eEEEEecCCCEEEEcCCCcccCCc
Q 022567 98 EKLAVGTKVQAVYSEDGE----WY-DATIEAITPNG-YYVTYDSWGNKEEVDPANVRPVNL 152 (295)
Q Consensus 98 ~~~kvGd~C~A~~s~Dg~----wY-~A~I~~i~~~~-~~V~F~~Ygn~e~V~~~~lrp~~~ 152 (295)
..+++||.|+.+-...|+ |. |-+|..+..++ |.|.=. -|+..++..++|+|...
T Consensus 318 ~~~~~Gd~V~~~~~~~~Kl~~~w~GPy~V~~~~~~~~~~l~~~-~g~~~~~~v~~Lkp~~~ 377 (395)
T 3oym_A 318 WSPVVGQLVQERVARPASLRPRWHKPSTVLKVLNPRTVVILDH-LGNNRTVSIDNLKPTSH 377 (395)
T ss_dssp ECCCTTCEEEEBCSSCCTTSCSBCCCEEEEEEEETTEEEEECT-TCCEEEEEGGGEEECSC
T ss_pred ccCCCCcEEEEecCCCccCCcCCCCCeEEEEEcCCCeEEEecC-CCCcccEehhhccccCC
Confidence 468999999987321111 21 55788887666 666333 36778999999999854
No 213
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=25.56 E-value=69 Score=26.57 Aligned_cols=49 Identities=18% Similarity=0.189 Sum_probs=36.1
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeC---Cc-eEEEEecCCCEEEEcCCCcccC
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITP---NG-YYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~---~~-~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
.+.+|..|+|. .+|.-|=+++|..... +. |.|.+ =|.+..++..+|..-
T Consensus 61 ~LP~~~~V~A~-~~ddy~s~giI~~h~~~~~e~~Y~Ve~--~G~t~~~~~~dI~LS 113 (156)
T 1ssf_A 61 PIPLDTEVTAL-SEDEYFSAGVVKGHRKESGELYYSIEK--EGQRKWYKRMAVILS 113 (156)
T ss_dssp CSCSSEEEEES-SCTTTCEEEEEEEEEEETTEEEEEEEE--TTEEEEECGGGEEEE
T ss_pred ccCCCcEEEEc-cCCccccccEEEeecCCCCcEEEEEEe--CCcEEEEEeeeEEEC
Confidence 57789999999 7677676777776552 33 99998 456677888888753
No 214
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=25.50 E-value=1.1e+02 Score=20.76 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEEcC--CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE--DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~--Dg~wY~A~I 121 (295)
+....++.||.+...-.. |..|+.+++
T Consensus 23 ~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 51 (73)
T 2k9g_A 23 DDELTIKEGDIVTLINKDCIDVGWWEGEL 51 (73)
T ss_dssp TTBCCBCTTCEEEEEECCSSSTTEEEEEE
T ss_pred CCeeeECCCCEEEEEECCCCCCCEEEEEE
Confidence 455679999999888753 677999985
No 215
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=25.35 E-value=94 Score=21.91 Aligned_cols=35 Identities=14% Similarity=0.431 Sum_probs=25.1
Q ss_pred CCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcc
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVR 148 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lr 148 (295)
=|..|.|+|.++++.|+-|.+.+ +-.-.|..++|.
T Consensus 5 ~G~iv~G~V~~v~~~G~fV~l~~-~~~Gllh~sel~ 39 (80)
T 2k52_A 5 PGKFYKGVVTRIEKYGAFINLNE-QVRGLLRPRDMI 39 (80)
T ss_dssp TTCEEEEEEEEEETTEEEEEEET-TEEEEECGGGCS
T ss_pred CCCEEEEEEEEEeCCEEEEEECC-CCEEEEEHHHCC
Confidence 37789999999998886677653 334566666653
No 216
>1vq8_V 50S ribosomal protein L29P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.2.2.1 PDB: 1vq4_V* 1vq5_V* 1vq6_V* 1vq7_V* 1s72_V* 1vq9_V* 1vqk_V* 1vql_V* 1vqm_V* 1vqn_V* 1vqo_V* 1vqp_V* 1yhq_V* 1yi2_V* 1yij_V* 1yit_V* 1yj9_V* 1yjn_V* 1yjw_V* 2otj_V* ...
Probab=25.29 E-value=1.8e+02 Score=20.55 Aligned_cols=48 Identities=17% Similarity=0.338 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcc--CCCCh-hHHHHHHHHHHHHHHH
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLVH--DPGNS-EYADMEKELSEVIALT 53 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~~--DP~N~-ELl~Lk~dL~EvI~Lt 53 (295)
++|.++|..+|.+.+..|-.+.-.... -++|. .+..++.++--|-...
T Consensus 11 ~~s~~EL~~~l~elk~ELf~LR~q~atggql~n~~~ir~vRr~IARi~Tvl 61 (71)
T 1vq8_V 11 DMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQ 61 (71)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccChHHHHHHHHHHHHHHHHH
Confidence 568899999999999999998755554 34555 6788888877765543
No 217
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=25.00 E-value=2.8e+02 Score=22.48 Aligned_cols=51 Identities=18% Similarity=0.243 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHh------ccCCCChhHHHHHHHHHHH---HHHHHHHHHH
Q 022567 9 IEELFSNLSTYKE-QLQQVRELL------VHDPGNSEYADMEKELSEV---IALTEELLAT 59 (295)
Q Consensus 9 ~e~Le~~L~~Yk~-QL~qVe~aL------~~DP~N~ELl~Lk~dL~Ev---I~Lt~ell~~ 59 (295)
++.|+++|+..+. ....|-.++ -+-.+|+|+..-|.++.++ |...+..|..
T Consensus 11 ~~~L~~EL~~L~~~~R~~i~~~i~~Ar~~GDlsENaeY~aak~~q~~~e~rI~~L~~~L~~ 71 (158)
T 2p4v_A 11 YEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCMEN 71 (158)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4578888887743 444444433 3467999999988887665 4444554543
No 218
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.92 E-value=1e+02 Score=21.47 Aligned_cols=27 Identities=15% Similarity=0.545 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+++
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~gWw~g~~ 57 (78)
T 2ed0_A 31 EDELSFQEGAIIYVIKKNDDGWYEGVM 57 (78)
T ss_dssp TTBCCBCSSCEEEEEEECSSSEEEEEE
T ss_pred cCcccccCCCEEEEEEeCCCCEEEEEE
Confidence 455678999998888766777999984
No 219
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Saccharomyces cerevisiae} PDB: 2a1a_A* 1q46_A
Probab=24.70 E-value=84 Score=26.14 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=26.1
Q ss_pred CCcEEEEEEeeEeCCceEEEEecCCCE-EEEcCCCcc
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSWGNK-EEVDPANVR 148 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~-e~V~~~~lr 148 (295)
-|..|.++|.+|++-|+-|.+.+|++. -.|..++|.
T Consensus 15 ~G~iv~G~V~~i~~fGaFV~L~e~~gveGLvhiSels 51 (175)
T 2a19_A 15 IDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELS 51 (175)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTTTTCEEEEECC---
T ss_pred CCCEEEEEEEEEecceEEEEEcCCCCcEEEEEHHHcC
Confidence 477899999999988988988766554 467777663
No 220
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.70 E-value=1.1e+02 Score=20.69 Aligned_cols=27 Identities=7% Similarity=0.337 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeEEEEEcC---CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE---DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~---Dg~wY~A~I 121 (295)
+....++.||.+...-.. +..|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~ 50 (71)
T 2cre_A 21 SDELAFSRGDILTILEQHVPESEGWWKCLL 50 (71)
T ss_dssp SSBCCCCSSCCEEEEESCCTTSTTEEEEES
T ss_pred CCCCCCCCCCEEEEeEcCCCCCCCcEEEEE
Confidence 455679999999988764 677999873
No 221
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=24.63 E-value=90 Score=21.03 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=21.0
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
..-.++.||.+...-..|..|+.+.+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~gWw~g~~~ 49 (67)
T 2eyx_A 23 TALALEVGELVKVTKINVSGQWEGECN 49 (67)
T ss_dssp SBCCBCSSEEEEEEEECTTSEEEEEET
T ss_pred CccccCCCCEEEEEEecCCCEEEEEEC
Confidence 456789999988877667779999653
No 222
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=24.38 E-value=1.1e+02 Score=20.42 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=20.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.++.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~gW~~g~~ 46 (65)
T 2j05_A 20 TDEISFLKGDMFIVHNELEDGWMWVTN 46 (65)
T ss_dssp SSBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCcCcCCCCCEEEEeEecCCCEEEEEE
Confidence 345678999998887755777999874
No 223
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.26 E-value=79 Score=21.65 Aligned_cols=27 Identities=7% Similarity=0.305 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.++.
T Consensus 23 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 49 (72)
T 2dl8_A 23 ARELSFKKGASLLLYQRASDDWWEGRH 49 (72)
T ss_dssp SSBCCBCTTCEEEEEEEEETTEEEEEE
T ss_pred CCEeccCCCCEEEEEeecCCCEEEEEE
Confidence 445678999998887755677999987
No 224
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=24.14 E-value=1.1e+02 Score=20.65 Aligned_cols=26 Identities=15% Similarity=0.528 Sum_probs=20.5
Q ss_pred CCCCCCCCCCeEEEEEc--CCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYS--EDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s--~Dg~wY~A~ 120 (295)
+....++.||.+...-. .|..|+.++
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~ 47 (71)
T 1u5s_A 20 EEELNFEKGETMEVIEKPENDPEWWKCK 47 (71)
T ss_dssp SSBCCCCSSCCEEEEECCCTTTCEEEEE
T ss_pred CCcccCCCCCEEEEEECCCCCCCCEEEE
Confidence 44567899999888875 467799887
No 225
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=24.13 E-value=1.2e+02 Score=20.21 Aligned_cols=26 Identities=12% Similarity=0.440 Sum_probs=20.5
Q ss_pred CCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 96 NQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
....++.||.+...-..|+.|+.++.
T Consensus 4 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 29 (63)
T 1tuc_A 4 REVTMKKGDILTLLNSTNKDWWKVEV 29 (63)
T ss_dssp CCCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred cccCCCCCCEEEEEEecCCCEEEEEE
Confidence 34568999999988866778999964
No 226
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=24.13 E-value=1.5e+02 Score=23.85 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=24.5
Q ss_pred CCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEE
Q 022567 99 KLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVT 132 (295)
Q Consensus 99 ~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~ 132 (295)
.|.+|+.|.+.|. -| -|=+.|..+.++.|.|.
T Consensus 7 ~~~~g~~v~~~yK-TG-~YigeI~e~~~~~~lVk 38 (130)
T 1y71_A 7 TFEIGEIVTGIYK-TG-KYIGEVTNSRPGSYVVK 38 (130)
T ss_dssp CCCTTCEEEEEET-TE-EEEEEEEEEETTEEEEE
T ss_pred cCCccceeEEEEe-cc-eeEEEEEeecCCeEEEE
Confidence 5899999999995 45 56788888777665554
No 227
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=23.96 E-value=1e+02 Score=20.71 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=20.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+.+
T Consensus 17 ~~eLsf~~Gd~i~v~~~~~~~Ww~g~~ 43 (67)
T 2bzy_A 17 KTALALEVGDIVKVTRMNINGQWEGEV 43 (67)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEEEEE
T ss_pred CCccccCCCCEEEEEEecCCCeEEEEe
Confidence 345678999998887756777998865
No 228
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=23.89 E-value=2.1e+02 Score=20.74 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=37.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcc-CCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 022567 7 LSIEELFSNLSTYKEQLQQVRELLVH-DPGNSEYADMEKELSEVIALTEELLATA 60 (295)
Q Consensus 7 ~s~e~Le~~L~~Yk~QL~qVe~aL~~-DP~N~ELl~Lk~dL~EvI~Lt~ell~~~ 60 (295)
+.+...+..|.+...=|..++..|.. +|--.++..++.-|...=.|..++-...
T Consensus 2 l~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~ 56 (118)
T 3uul_A 2 MDLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQ 56 (118)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888888888888888865 6656677777777766666666655543
No 229
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=23.71 E-value=1e+02 Score=19.69 Aligned_cols=27 Identities=15% Similarity=0.472 Sum_probs=20.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..+..|+.+..
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~ 41 (58)
T 4e6r_A 15 EDELSLVXGSRVTVMEXCSDGWWRGSY 41 (58)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CCEeeEeCCCEEEEeEcCCCCEEEEEE
Confidence 345679999998888755677999843
No 230
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=23.56 E-value=86 Score=20.60 Aligned_cols=28 Identities=18% Similarity=0.474 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.+++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~W~~g~~~ 48 (65)
T 3u23_A 21 EDELELKVGDIIDINEEVEEGWWSGTLN 48 (65)
T ss_dssp TTBCCBCTTCEEEEEEEEETTEEEEEET
T ss_pred cCCcCCCCCCEEEEEEecCCCEEEEEEC
Confidence 4456799999988776556779999853
No 231
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=23.44 E-value=1.2e+02 Score=21.66 Aligned_cols=27 Identities=11% Similarity=0.415 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.+..
T Consensus 31 ~~eLsf~~Gd~i~Vl~~~~~gWw~g~~ 57 (83)
T 1neg_A 31 PREVTMKKGDILTLLNSTNKDWWKVEV 57 (83)
T ss_dssp TTBCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCccccCCCCEEEEEEecCCCEEEEEE
Confidence 455678999999998866778999843
No 232
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.36 E-value=84 Score=21.17 Aligned_cols=28 Identities=18% Similarity=0.439 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.++..
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~gW~~g~~~ 48 (70)
T 2ct3_A 21 EDELELREGDRVDVMQQCDDGWFVGVSR 48 (70)
T ss_dssp TTBCCBCTTEEEEEEEECSSSCEEEEES
T ss_pred cCCccCCCCCEEEEEEECCCCEEEEEEC
Confidence 4456789999988877556779888775
No 233
>2cqo_A Nucleolar protein of 40 kDa; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.21 E-value=40 Score=26.21 Aligned_cols=35 Identities=9% Similarity=0.165 Sum_probs=25.4
Q ss_pred CCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCc
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANV 147 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~l 147 (295)
=|..|.|+|..|.+.|+-|.+.+++..-.|.+++|
T Consensus 22 vG~iv~G~V~~I~~fGaFV~l~g~~~~Glvhisel 56 (119)
T 2cqo_A 22 LYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHM 56 (119)
T ss_dssp TTCEEEEEEEEEETTEEEEECTTCSSCEEEEHHHH
T ss_pred CCCEEEEEEEEEeCceEEEEECCCcEEEEEEHHHC
Confidence 36789999999998888788855544455665555
No 234
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=23.12 E-value=69 Score=21.69 Aligned_cols=29 Identities=17% Similarity=0.477 Sum_probs=22.0
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEee
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEA 123 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~ 123 (295)
+....++.||.+...-..|+.|+.++...
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~ 49 (70)
T 2ecz_A 21 QVEMSFRKGERITLLRQVDENWYEGRIPG 49 (70)
T ss_dssp TTBCCCCTTCBCEEEEEEETTEEEEEETT
T ss_pred cCCcCCCCCCEEEEEEecCCCeEEEEECC
Confidence 44567899999887765567799998754
No 235
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=23.11 E-value=1.1e+02 Score=30.26 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=29.7
Q ss_pred CCCCCCCCCeEEEEE-cCC-CcEEEEEEeeEeCCceEEEEec
Q 022567 96 NQEKLAVGTKVQAVY-SED-GEWYDATIEAITPNGYYVTYDS 135 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~-s~D-g~wY~A~I~~i~~~~~~V~F~~ 135 (295)
+.+.+++||.|+..- .++ ..+|.++|..|+.+.++|.|..
T Consensus 77 ~~~~~~~Gd~v~~~~~~~~~~~~~~g~v~~~~~~~i~v~~~~ 118 (646)
T 4b3f_X 77 PSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE 118 (646)
T ss_dssp CCCCCCTTCEEEEEETTTTSCCCEEEEEEEEETTEEEEECC-
T ss_pred ccCCCCCCCEEEEEecCCCCCceEEEEEEEEeCCEEEEEECC
Confidence 346799999987653 222 3589999999987778888854
No 236
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.00 E-value=92 Score=21.08 Aligned_cols=28 Identities=11% Similarity=0.246 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.++..
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (71)
T 2dnu_A 22 KDEIGFEKGVTVEVIRKNLEGWWYIRYL 49 (71)
T ss_dssp TTBCCBCTTCEEEECCCCSSSEEEEEET
T ss_pred CCCCcCCCCCEEEEeECCCCCeEEEEEC
Confidence 4556789999988887556779988766
No 237
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=22.98 E-value=72 Score=22.87 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=21.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.+++.
T Consensus 33 ~~eLsf~~GDiI~V~~~~~~gWw~G~~~ 60 (83)
T 2ke9_A 33 PTALNVRAGDVITVLEQHPDGRWKGHIH 60 (83)
T ss_dssp TTBCCBCTTCEEEESCSSCSSCEEEEEC
T ss_pred CCcccccCCCEEEEEEecCCCeEEEEEC
Confidence 4556789999988876556679999875
No 238
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=22.96 E-value=96 Score=21.77 Aligned_cols=28 Identities=4% Similarity=0.305 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCc-EEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGE-WYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~-wY~A~I~ 122 (295)
.....|+.||.+...-..|+. |+.+++.
T Consensus 24 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~ 52 (80)
T 2i0n_A 24 TSLLPFKRNDIITITFKDQENKWFMGQLN 52 (80)
T ss_dssp SSSCCBCSSEEEEEEEESSSSSEEEEEET
T ss_pred CCCcCCCCCCEEEEEEecCCCCEEEEEEC
Confidence 455678999998888755555 9999753
No 239
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.84 E-value=1.1e+02 Score=22.01 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+..+-..|..||.+++
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~gWw~g~~ 57 (88)
T 2cub_A 31 EDELSLIKGTKVIVMEKCSDGWWRGSY 57 (88)
T ss_dssp TTBCCCCTTEEEEEEEECTTSEEEEEE
T ss_pred CCCcCCCCCCEEEEEEccCCCeEEEEE
Confidence 455779999998888765777999986
No 240
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.84 E-value=54 Score=21.61 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHHHH
Q 022567 37 SEYADMEKELSEVIA 51 (295)
Q Consensus 37 ~ELl~Lk~dL~EvI~ 51 (295)
.||+++|+|+.+.|.
T Consensus 22 kElqK~K~EIIeAi~ 36 (45)
T 1use_A 22 KELQKVKEEIIEAFV 36 (45)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 378888888887764
No 241
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=22.54 E-value=1.5e+02 Score=18.69 Aligned_cols=27 Identities=15% Similarity=0.395 Sum_probs=20.6
Q ss_pred CCCCCCCCCCeEEEEEcCC-CcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSED-GEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~D-g~wY~A~I 121 (295)
+....++.||.+...-..| ..|+.++.
T Consensus 14 ~~eLs~~~Gd~i~v~~~~~~~~W~~g~~ 41 (54)
T 2a28_A 14 DDEISIDPGDIITVIRGDDGSGWTYGEC 41 (54)
T ss_dssp TTBCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCCccCCCCCEEEEEEecCCCCEEEEEE
Confidence 3456789999998887554 46999987
No 242
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=22.52 E-value=79 Score=21.67 Aligned_cols=27 Identities=15% Similarity=0.437 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (73)
T 2dbm_A 21 EGELGFKEGDIITLTNQIDENWYEGML 47 (73)
T ss_dssp TTCCCBCTTCEEECCBCSSSSEEEEEE
T ss_pred CCCccCCCCCEEEEEEecCCCEEEEEE
Confidence 445678999999888766778999975
No 243
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=22.51 E-value=1.3e+02 Score=21.39 Aligned_cols=26 Identities=15% Similarity=0.528 Sum_probs=20.8
Q ss_pred CCCCCCCCCCeEEEEEc--CCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYS--EDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s--~Dg~wY~A~ 120 (295)
+....|+.||.+...-. .|..||.++
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~ 58 (91)
T 1wx6_A 31 EEELNFEKGETMEVIEKPENDPEWWKCK 58 (91)
T ss_dssp SSBCCCCTTCEEEEEECCSSCTTEEEEE
T ss_pred CCcccCCCCCEEEEEECCCCCCCcEEEE
Confidence 45567999999988875 477799986
No 244
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.42 E-value=59 Score=22.02 Aligned_cols=28 Identities=18% Similarity=0.470 Sum_probs=21.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|+.|+.+++.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 48 (69)
T 2eqi_A 21 SDELTFCRGALIHNVSKEPGGWWKGDYG 48 (69)
T ss_dssp SSCCCBCTTCEEESCCCCSSSCEEEEET
T ss_pred cCccCCCCCCEEEEEEcCCCCeEEEEEC
Confidence 4456789999988876567789999864
No 245
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=22.38 E-value=35 Score=23.57 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 022567 9 IEELFSNLSTYKEQLQQVR 27 (295)
Q Consensus 9 ~e~Le~~L~~Yk~QL~qVe 27 (295)
+++|+..|..++.+|+++.
T Consensus 51 ~~~Le~ri~~Le~~l~~l~ 69 (72)
T 2er8_A 51 NEAIEKRFKELTRTLTNLT 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4566666666666665543
No 246
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=22.29 E-value=71 Score=22.34 Aligned_cols=28 Identities=18% Similarity=0.471 Sum_probs=21.7
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..|..|+.++..
T Consensus 31 ~~eLsf~~Gd~i~Vl~~~~~gWw~g~~~ 58 (72)
T 2l0a_A 31 DNELTFKAGEIITVLDDSDPNWWKGETH 58 (72)
T ss_dssp TTBCCBCTTCEEEEEEEEETTEEEEECS
T ss_pred CCccCCCCCCEEEEEEecCCCEEEEEEC
Confidence 4556789999988887556779998763
No 247
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=22.19 E-value=1e+02 Score=21.36 Aligned_cols=44 Identities=27% Similarity=0.272 Sum_probs=28.8
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPV 150 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~ 150 (295)
+....++.||.+...-..|..|+.++...- |..-.|+...|.++
T Consensus 19 ~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~------------g~~G~~P~~yv~~~ 62 (73)
T 2lcs_A 19 DNELRLAEGDIVFISYKHGQGWLVAENESG------------SKTGLVPEEFVSYI 62 (73)
T ss_dssp TTBCCBCTTCEEEEEEEETTTEEEEECTTS------------SCEEEEESTTEEEC
T ss_pred CCccCCcCCCEEEEEEEcCCCEEEEEECCC------------CCEEEeeHHHEEEC
Confidence 345678999998877655666988875421 22345666666665
No 248
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=22.14 E-value=1.1e+02 Score=20.56 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=21.2
Q ss_pred CCCCCCCCCeEEEEEc-CCCcEEEEEEe
Q 022567 96 NQEKLAVGTKVQAVYS-EDGEWYDATIE 122 (295)
Q Consensus 96 ~~~~~kvGd~C~A~~s-~Dg~wY~A~I~ 122 (295)
..-.++.||.+...-. .|..|+.++..
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~ 52 (70)
T 1gcq_C 25 PFLRLNPGDIVELTKAEAEHNWWEGRNT 52 (70)
T ss_dssp CBCCBCTTCEEEEEECCTTCSEEEEEET
T ss_pred CcCCcCCCCEEEEEeCCCCCCCeEEEeC
Confidence 3567999999988875 57889999753
No 249
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.09 E-value=1.1e+02 Score=21.25 Aligned_cols=27 Identities=19% Similarity=0.377 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 47 (79)
T 2yun_A 21 DDELNLEKGDIVIIHEKKEEGWWFGSL 47 (79)
T ss_dssp TTBCCBCTTCEEEEEECCSSSCEEEES
T ss_pred CCCcCCCCCCEEEEEEcCCCCEEEEEE
Confidence 445678999999888766777988873
No 250
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=22.09 E-value=46 Score=25.94 Aligned_cols=45 Identities=9% Similarity=0.196 Sum_probs=30.9
Q ss_pred CCCeEEEEEcCCCcEEEEEEeeEeCC-c-eEEEEecCCCEEEEcCCCccc
Q 022567 102 VGTKVQAVYSEDGEWYDATIEAITPN-G-YYVTYDSWGNKEEVDPANVRP 149 (295)
Q Consensus 102 vGd~C~A~~s~Dg~wY~A~I~~i~~~-~-~~V~F~~Ygn~e~V~~~~lrp 149 (295)
..-.|++.|. ||.|| +|.+++.+ + +.|..-+.|....++.+++..
T Consensus 75 l~lP~Il~~~-~g~~~--Vv~~~~~~~~~~~I~dP~~g~~~~~s~~ef~~ 121 (142)
T 3zua_A 75 ISLPALVWRE-DGRHF--ILTKVSKEANRYLIFDLEQRNPRVLEQSEFEA 121 (142)
T ss_dssp SSSSEEECCT-TSCCE--EEEEEETTTTEEEEEETTTTEEEEEEHHHHHH
T ss_pred CCCCEEEEEc-CCCEE--EEEEEeCCCCEEEEEcCCCCCcEEecHHHHHh
Confidence 3567999874 77775 67778764 4 777777777666777666543
No 251
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.94 E-value=1.3e+02 Score=20.16 Aligned_cols=28 Identities=14% Similarity=0.363 Sum_probs=20.5
Q ss_pred CCCCCCCCCCeEEEEEcCCC-cEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDG-EWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg-~wY~A~I~ 122 (295)
+....++.||.+...-..|+ .||.++..
T Consensus 21 ~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~ 49 (70)
T 2ct4_A 21 EGTISMAEGEDLSLMEEDKGDGWTRVRRK 49 (70)
T ss_dssp TTCCCBCTTCEEEEEECCSSSCEEEEECS
T ss_pred CCcCCCCCCCEEEEEeccCCCCeEEEEeC
Confidence 44567899999988875443 39988754
No 252
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=21.58 E-value=97 Score=21.41 Aligned_cols=27 Identities=11% Similarity=0.099 Sum_probs=21.5
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.+.+
T Consensus 25 ~~eLs~~~Gd~i~v~~~~~~gWw~g~~ 51 (73)
T 2ebp_A 25 TDSLKLKKGDIIDIISKPPMGTWMGLL 51 (73)
T ss_dssp CSBCCBCSSCEEEEEECCSSSCEEEEC
T ss_pred CCccCCCCCCEEEEEEeCCCCeEEEEE
Confidence 455679999999888766777998865
No 253
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=21.35 E-value=88 Score=21.05 Aligned_cols=26 Identities=12% Similarity=0.272 Sum_probs=19.9
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~ 120 (295)
+....++.||.+...-..|..|+.++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~ 46 (70)
T 2cuc_A 21 PEELDLQKGEGIRVLGKYQDGWLKGL 46 (70)
T ss_dssp TTBCCBCTTCEEEEEEEEETTEEEEE
T ss_pred CCcCCCCCCCEEEEEEecCCCeEEEE
Confidence 45567899999888775466798887
No 254
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.29 E-value=1.1e+02 Score=20.72 Aligned_cols=27 Identities=15% Similarity=0.417 Sum_probs=21.1
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|..|+.++.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~ 48 (70)
T 2ega_A 22 NSELSLQAGEVVDVIEKNESGWWFVST 48 (70)
T ss_dssp SSSCCCCTTCBCEEEEECTTSEEEEEC
T ss_pred CCcccCCCCCEEEEEEccCCCeEEEEE
Confidence 455678999998888765777998874
No 255
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=21.27 E-value=92 Score=26.13 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=27.8
Q ss_pred CCcEEEEEEeeEeCCceEEEEecCCCE-EEEcCCCc
Q 022567 113 DGEWYDATIEAITPNGYYVTYDSWGNK-EEVDPANV 147 (295)
Q Consensus 113 Dg~wY~A~I~~i~~~~~~V~F~~Ygn~-e~V~~~~l 147 (295)
-|..|.++|.+|++-|+-|.+.+|++. -.|.+++|
T Consensus 15 ~G~iv~G~V~~I~~fGaFV~L~e~~g~eGLvhiSel 50 (182)
T 1kl9_A 15 VEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSEL 50 (182)
T ss_dssp TTCEEEEEEEEECSSEEEEEETTTTTEEEEEEGGGC
T ss_pred CCCEEEEEEEEEeccEEEEEEccCCCcEEEEEHHHC
Confidence 478899999999988888999777665 36666666
No 256
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=21.05 E-value=2.3e+02 Score=23.08 Aligned_cols=49 Identities=20% Similarity=0.337 Sum_probs=36.0
Q ss_pred CCCCCCCCeEEEEEcCCCc--EEEEEEeeEeCC-c-eEEEEecCCCE--EEEcCCCcc
Q 022567 97 QEKLAVGTKVQAVYSEDGE--WYDATIEAITPN-G-YYVTYDSWGNK--EEVDPANVR 148 (295)
Q Consensus 97 ~~~~kvGd~C~A~~s~Dg~--wY~A~I~~i~~~-~-~~V~F~~Ygn~--e~V~~~~lr 148 (295)
...+.+||.|... ||- =+.|+|..++.+ + +.|...-+|-. .+|.+++|.
T Consensus 125 ~~~~~~Gd~V~V~---~GPf~g~~G~v~~v~~~k~r~~V~v~ifgr~t~vel~~~qve 179 (181)
T 2jvv_A 125 KTLFEPGEMVRVN---DGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVE 179 (181)
T ss_dssp CCCCCTTEEEEEC---SSTTTTEEEEEEEEETTTTEEEEEEEETTEEEEEEECTTTEE
T ss_pred cccCCCCCEEEEe---ccCCCCcEEEEEEEeCCCCEEEEEEEECCCCEEEEECHHHEE
Confidence 4578999999998 454 379999999854 4 77777777754 466666664
No 257
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=21.03 E-value=1.9e+02 Score=26.82 Aligned_cols=56 Identities=11% Similarity=0.200 Sum_probs=41.1
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhc-----cCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLV-----HDPGNSEYADMEKELSEVIALTEELLATAK 61 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~-----~DP~N~ELl~Lk~dL~EvI~Lt~ell~~~~ 61 (295)
..|++++-.-|+..+.++++-..+.- .-|+.+|+..-+.-|.++|--....++-+.
T Consensus 63 a~s~~~~~~~l~~mr~aa~daqk~~p~kl~~k~~ds~E~kd~~~Gl~~li~qiD~a~~la~ 123 (347)
T 3u8p_A 63 ADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN 123 (347)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTSCCGGGTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhhcCCCccccccCCCchHHHHHHHHHHHHHHHhhHHHHhhh
Confidence 44566666667777776666654432 289999999999999999988777776554
No 258
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=20.99 E-value=1.3e+02 Score=22.18 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=20.7
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDAT 120 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~ 120 (295)
.....|..|..|.+++..+|.|+...
T Consensus 87 ~~~~~W~~g~pC~~~~~~~~~W~~~~ 112 (125)
T 1jwi_B 87 LDYRALSDEPICFVAESFHNKWIQWT 112 (125)
T ss_dssp CCSCCSCCSCEEEEEETTTCCEEEEE
T ss_pred CccCCcCCCCCeEEEECCCCeEecCC
Confidence 35567999999999997679997653
No 259
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.87 E-value=1.1e+02 Score=21.61 Aligned_cols=27 Identities=11% Similarity=0.138 Sum_probs=21.2
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-..|+.|+.++.
T Consensus 33 ~~eLs~~~Gd~i~v~~~~~~~Ww~~~~ 59 (85)
T 2yuq_A 33 PQELALRRNEEYCLLDSSEIHWWRVQD 59 (85)
T ss_dssp SSBCCCCBTEEEEEEECCSSSEEEEEC
T ss_pred CCcCCCCCCCEEEEEEecCCCeEEEEE
Confidence 455678999999888766778998864
No 260
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=20.82 E-value=92 Score=23.77 Aligned_cols=25 Identities=12% Similarity=0.175 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCChhH
Q 022567 15 NLSTYKEQLQQVRELLVHDPGNSEY 39 (295)
Q Consensus 15 ~L~~Yk~QL~qVe~aL~~DP~N~EL 39 (295)
.+..|..=+...+.+|..+|+|.+.
T Consensus 67 ~~g~~~~A~~~~~~al~l~p~~~~~ 91 (148)
T 2vgx_A 67 AMGQYDLAIHSYSYGAVMDIXEPRF 91 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred HHhhHHHHHHHHHHHHhcCCCCchH
Confidence 3444555555555556666665553
No 261
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=20.71 E-value=1.7e+02 Score=19.72 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHhccCCCChh
Q 022567 16 LSTYKEQLQQVRELLVHDPGNSE 38 (295)
Q Consensus 16 L~~Yk~QL~qVe~aL~~DP~N~E 38 (295)
...|..-+...+.+|..+|++.+
T Consensus 13 ~~~~~~A~~~~~~al~~~p~~~~ 35 (99)
T 2kc7_A 13 QGDIENALQALEEFLQTEPVGKD 35 (99)
T ss_dssp HTCHHHHHHHHHHHHHHCSSTHH
T ss_pred cCCHHHHHHHHHHHHHHCCCcHH
Confidence 33455555555555555555555
No 262
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=20.59 E-value=1.4e+02 Score=21.91 Aligned_cols=45 Identities=22% Similarity=0.480 Sum_probs=30.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
+....++.||.+...-..|..|+.++... + |..-.|+...|.++.
T Consensus 41 ~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~-----------g~~G~~P~~yv~~~~ 85 (109)
T 2yt6_A 41 TEDLSFKKGERFQIINNTEGDWWEARSIA-T-----------GKSGYIPSNYVVPAD 85 (109)
T ss_dssp TTSCCCCTTCEEEEEECSCTTCEEEEESS-S-----------CCEEEECTTTEEESS
T ss_pred CCccCCCCCCEEEEEEccCCCcEEEEECC-C-----------CCEEEechHHcEECC
Confidence 45677999999988876677899888631 1 223456666666653
No 263
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=20.34 E-value=2.1e+02 Score=23.44 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=36.2
Q ss_pred CCCCeEEEEEc---CCCcEEEEEEeeEeCCceEEEEecCC--CEEEEcCCCccc
Q 022567 101 AVGTKVQAVYS---EDGEWYDATIEAITPNGYYVTYDSWG--NKEEVDPANVRP 149 (295)
Q Consensus 101 kvGd~C~A~~s---~Dg~wY~A~I~~i~~~~~~V~F~~Yg--n~e~V~~~~lrp 149 (295)
-+|..+..... .++..|.++|.+++++.+++.+.+-. ....+++++|.-
T Consensus 102 ~~G~~V~V~l~~~~~g~k~~~G~L~~~~~~~v~l~~~~k~~~~~~~i~~~~I~k 155 (164)
T 1ib8_A 102 AVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSK 155 (164)
T ss_dssp HCSEEEEEECSSCSSSCSEEEEEEEEEETTEEEEEEECSSCEEEEEECSSCCSS
T ss_pred hCCcEEEEEEecccCCceEEEEEEEEEeCCEEEEEEecccCCeEEEEEHHHCcE
Confidence 47999998873 34589999999998877888776522 235688888764
No 264
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=20.13 E-value=1.5e+02 Score=21.07 Aligned_cols=26 Identities=19% Similarity=0.479 Sum_probs=20.4
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I 121 (295)
+....++.||.+...-. |+.|+.++.
T Consensus 17 ~~eLs~~~Gd~i~v~~~-~~~Ww~g~~ 42 (90)
T 3reb_B 17 PDDLSFQKGDQMVVLEE-SGEWWKARS 42 (90)
T ss_dssp TTBCCBCTTCEEEEEEC-SSSEEEEEE
T ss_pred cCcCCCCCCCEEEEEEe-CCCEEEEEE
Confidence 44567999999988876 556999886
No 265
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.12 E-value=1.4e+02 Score=20.10 Aligned_cols=27 Identities=19% Similarity=0.524 Sum_probs=20.9
Q ss_pred CCCCCCCCCCeEEEEEcC--CCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSE--DGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~--Dg~wY~A~I 121 (295)
+....++.||.+...-.. |..|+.+++
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 49 (70)
T 2da9_A 21 DDELTIKEGDIVTLINKDCIDVGWWEGEL 49 (70)
T ss_dssp TTBCCCCTTEEEEEEECCCSSTTEEEEEC
T ss_pred cCEeeEcCCCEEEEEECCCCCCCeEEEEE
Confidence 455679999998888653 677999984
No 266
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.11 E-value=1.7e+02 Score=20.45 Aligned_cols=27 Identities=15% Similarity=0.318 Sum_probs=20.2
Q ss_pred CCCCCCCCCCeEEEEEcCCC-cEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYSEDG-EWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg-~wY~A~I 121 (295)
+....|+.||.+...-..|+ .||.++.
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~ 58 (81)
T 1x6g_A 31 PGELAFRKGDVVTILEACENKSWYRVKH 58 (81)
T ss_dssp TTCCCBCTTCEEEEEECCCSSSEEEEEE
T ss_pred CCCCCCCCCCEEEEEeccCCCCeEEEEe
Confidence 45567899999888774444 7999874
No 267
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.07 E-value=1.5e+02 Score=20.20 Aligned_cols=27 Identities=11% Similarity=0.423 Sum_probs=20.7
Q ss_pred CCCCCCCCCCeEEEEEc---CCCcEEEEEE
Q 022567 95 DNQEKLAVGTKVQAVYS---EDGEWYDATI 121 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s---~Dg~wY~A~I 121 (295)
+....++.||.+...-. .|..|+.+++
T Consensus 22 ~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~ 51 (73)
T 2dl7_A 22 DDELSFPEGAIIRILNKENQDDDGFWEGEF 51 (73)
T ss_dssp TTBCCBCTTCEEEEEECCCSSSSSCEEEEE
T ss_pred CCcCCCCCCCEEEEEECCCCCCCCcEEEEE
Confidence 44567899999988875 3677988884
No 268
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.05 E-value=1.5e+02 Score=20.61 Aligned_cols=43 Identities=12% Similarity=0.204 Sum_probs=29.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEeeEeCCceEEEEecCCCEEEEcCCCcccCC
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIEAITPNGYYVTYDSWGNKEEVDPANVRPVN 151 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~~i~~~~~~V~F~~Ygn~e~V~~~~lrp~~ 151 (295)
+....++.||.+..+-..+..|+.+++.. ..-.|+...|.++.
T Consensus 22 ~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g--------------~~G~~P~~yv~~~~ 64 (80)
T 2ekh_A 22 DSEISFPAGVEVQVLEKQESGWWYVRFGE--------------LEGWAPSHYLVLDE 64 (80)
T ss_dssp TTSCCBCTTCEEEEEEECTTSEEEEEETT--------------EEEEEETTTEECCC
T ss_pred CCccCcCCCCEEEEEEeCCCCeEEEEECC--------------CEEEEEhHHeEECC
Confidence 45567899999888775566788887532 23466777777763
No 269
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=20.01 E-value=3.2e+02 Score=26.05 Aligned_cols=28 Identities=25% Similarity=0.271 Sum_probs=25.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhccC
Q 022567 6 ELSIEELFSNLSTYKEQLQQVRELLVHD 33 (295)
Q Consensus 6 ~~s~e~Le~~L~~Yk~QL~qVe~aL~~D 33 (295)
..++++|+.++.+++..|..|+..|...
T Consensus 280 kvs~~~l~~dl~~L~~~l~~v~~~l~~~ 307 (457)
T 3obv_E 280 RVSAENLQKSLDQMKKQIADVERDVQNF 307 (457)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999999998753
No 270
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.00 E-value=1e+02 Score=21.32 Aligned_cols=28 Identities=11% Similarity=0.340 Sum_probs=21.6
Q ss_pred CCCCCCCCCCeEEEEEcCCCcEEEEEEe
Q 022567 95 DNQEKLAVGTKVQAVYSEDGEWYDATIE 122 (295)
Q Consensus 95 ~~~~~~kvGd~C~A~~s~Dg~wY~A~I~ 122 (295)
+....++.||.+...-..+..|+.+++.
T Consensus 23 ~~eLs~~~Gd~i~vl~~~~~gWw~g~~~ 50 (75)
T 2egc_A 23 EETAGFQEGVSMEVLERNPNGWWYCQIL 50 (75)
T ss_dssp SSSCCBCTTCEEEECEECTTSEEEEEEC
T ss_pred CCcCCCCCCCEEEEEEcCCCCeEEEEeC
Confidence 3456789999988887556669999875
Done!