BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022571
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224126447|ref|XP_002329556.1| predicted protein [Populus trichocarpa]
gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa]
gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/311 (73%), Positives = 256/311 (82%), Gaps = 17/311 (5%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLST----------------SFISPFA 44
M VATA+A FG RMLA+P S R +N NR L+ F+SPFA
Sbjct: 1 MAVATATASSFGFHKRMLASP-TVSSRIINPNRTLALSSSPSTSSSSRASLSTCFLSPFA 59
Query: 45 NGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNR 104
GS++ DFSG ++RP+CLNP S SK + V+TMVIP+T G+AWEQPPPDLASYL+KNR
Sbjct: 60 GGSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNR 119
Query: 105 IVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDV 164
IVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEKLGYETEAFAIYDV
Sbjct: 120 IVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAIYDV 179
Query: 165 MGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIAR 224
MGYVKPPIFTLCVGNAWGEAALLL AG++GNR+ALPSSTIM+KQPIGR +GQATDVE+AR
Sbjct: 180 MGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIGRFQGQATDVELAR 239
Query: 225 KEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHG 284
KE+KNVK ELV L AKH GK PE+IEADI RPKYFSP+EAVEYGIIDKV+Y E++ ED G
Sbjct: 240 KEIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVIYNERTTEDRG 299
Query: 285 VVSDLKKAQLI 295
VVSDLKKAQLI
Sbjct: 300 VVSDLKKAQLI 310
>gi|255580803|ref|XP_002531222.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223529182|gb|EEF31158.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 314
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/315 (70%), Positives = 250/315 (79%), Gaps = 21/315 (6%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGS------------- 47
MEVATA+A L TRMLA+ P S T + NR L+ S S ++
Sbjct: 1 MEVATATASTVALHTRMLASTPICS-HTSSSNRTLAFSSSSSSSSSPSLRSSSLSTSFFS 59
Query: 48 -------VSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYL 100
V DFSG+++RP+CLNP S + + V+TMVIP+T G+AWEQPPPDLASYL
Sbjct: 60 SFSGSGSVIGDFSGMKVRPECLNPASISNFRGKRSVVTMVIPYTRGSAWEQPPPDLASYL 119
Query: 101 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFA 160
+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTKGGEKLGYETEAFA
Sbjct: 120 FKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFA 179
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I+DVMGYVKPPIFTLCVGNAWGEAALLL AG+KGNR+ALPSSTIMIKQPIGR +GQATDV
Sbjct: 180 IHDVMGYVKPPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMIKQPIGRFQGQATDV 239
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
E+ARKE+ NVKAELV L AK+ GK+P +IEADI RPKYF+P+EAVEYGIIDKVLY E+
Sbjct: 240 ELARKEISNVKAELVNLLAKYIGKSPGEIEADISRPKYFTPAEAVEYGIIDKVLYNERGT 299
Query: 281 EDHGVVSDLKKAQLI 295
ED GVVSDLKKAQLI
Sbjct: 300 EDRGVVSDLKKAQLI 314
>gi|297800408|ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
gi|297313924|gb|EFH44347.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 231/257 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSDF G +LR + LNP + SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDFCGAKLRAESLNPLNLSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQAT 218
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQPI R +GQAT
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQAT 228
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
DVEIARKE+K++K E+VKLY+KH GK+PEQIEAD++RPKYFSPSEAVEYGIIDKV+Y E+
Sbjct: 229 DVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPSEAVEYGIIDKVVYNER 288
Query: 279 SPEDHGVVSDLKKAQLI 295
+D GVVSDLKKAQLI
Sbjct: 289 GSQDRGVVSDLKKAQLI 305
>gi|18414804|ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 4, chloroplastic; Short=ClpR4;
Flags: Precursor
gi|21593086|gb|AAM65035.1| ATP-dependent Clp protease proteolytic subunit ClpR4, putative
[Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease complex subunit ClpR4 [Arabidopsis thaliana]
gi|332658442|gb|AEE83842.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
[Arabidopsis thaliana]
Length = 305
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/257 (79%), Positives = 231/257 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQAT 218
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQPI R +GQAT
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQAT 228
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
DVEIARKE+K++K E+VKLY+KH GK+PEQIEAD++RPKYFSP+EAVEYGIIDKV+Y E+
Sbjct: 229 DVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNER 288
Query: 279 SPEDHGVVSDLKKAQLI 295
+D GVVSDLKKAQLI
Sbjct: 289 GSQDRGVVSDLKKAQLI 305
>gi|19698857|gb|AAL91164.1| unknown protein [Arabidopsis thaliana]
gi|23197684|gb|AAN15369.1| unknown protein [Arabidopsis thaliana]
Length = 305
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/257 (79%), Positives = 231/257 (89%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED +KPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEKKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQAT 218
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQPI R +GQAT
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQAT 228
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
DVEIARKE+K++K E+VKLY+KH GK+PEQIEAD++RPKYFSP+EAVEYGIIDKV+Y E+
Sbjct: 229 DVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNER 288
Query: 279 SPEDHGVVSDLKKAQLI 295
+D GVVSDLKKAQLI
Sbjct: 289 GSQDRGVVSDLKKAQLI 305
>gi|260766931|gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
Length = 305
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/307 (76%), Positives = 256/307 (83%), Gaps = 15/307 (4%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNR------------NLSTSFISPFANGSV 48
MEVAT +A F L TRMLATP T PR N R +LSTSF+ PFA S+
Sbjct: 1 MEVAT-TASSFALHTRMLATP--TIPRARNTTRPHPTSSRSLPRASLSTSFLCPFAGNSL 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
SS+FSG +LRP LNP SF S+P+ V+TMVI F G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SSEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMK 228
KPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIM+KQPI R +GQATD+E+AR+E++
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQGQATDIELARREVR 237
Query: 229 NVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSD 288
NVK ELVKL+AKH GK+ EQIEADIRRPKYFSPSEAVEYGIIDKVLY E+S ED GVVSD
Sbjct: 238 NVKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSD 297
Query: 289 LKKAQLI 295
LKKAQLI
Sbjct: 298 LKKAQLI 304
>gi|449459004|ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Cucumis sativus]
Length = 304
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/307 (74%), Positives = 251/307 (81%), Gaps = 15/307 (4%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLS------------TSFISPFANGSV 48
MEVAT +A F L R+ +P TS NR LS T+F+ PFA GSV
Sbjct: 1 MEVAT-TASSFALTKRI--SPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSV 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
S +FSG++LRP LNP+ SK + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED KPIYLY+NSTGTTKGGEKLGYETEAFA+YDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMK 228
KPPIFTLCVGNAWGEAALLL AGA GNR+ALPSSTIMIK+PI R +GQATDVEIARKE++
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVR 237
Query: 229 NVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSD 288
NVKAELVKLYAKH GK+ E+IEADIRRPKYFSPSEAVEYGIIDKVLY E++ ED GVVSD
Sbjct: 238 NVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSD 297
Query: 289 LKKAQLI 295
LKKAQLI
Sbjct: 298 LKKAQLI 304
>gi|359495737|ref|XP_003635075.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Vitis vinifera]
Length = 297
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/300 (74%), Positives = 252/300 (84%), Gaps = 8/300 (2%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNRNLST-----SFISPFANGSVSSDFSGL 55
M VAT ++ +F TRMLA P T+ T + NR L++ + +SP+ GSV+SDFSG
Sbjct: 1 MGVATMASNLF-THTRMLAPP--TNSGTTSSNRTLASFSLRANLLSPYVGGSVASDFSGQ 57
Query: 56 RLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS 115
++RP L SF S + +TMVIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPS
Sbjct: 58 KIRPSSLYSASFSGSHAKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPS 117
Query: 116 VTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTL 175
VTELILAEFLYLQY+D EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK PIFTL
Sbjct: 118 VTELILAEFLYLQYDDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKSPIFTL 177
Query: 176 CVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELV 235
CVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQPI R +GQATD+++ARKE+KNVKAELV
Sbjct: 178 CVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQPIARFQGQATDIDLARKEVKNVKAELV 237
Query: 236 KLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
KLYAKH GK+PE+IEADIRRPKYFSPSEAVEYGIIDKVLY E+S ED GVV+DLKKAQLI
Sbjct: 238 KLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSSEDRGVVADLKKAQLI 297
>gi|356563393|ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Glycine max]
Length = 304
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/307 (74%), Positives = 251/307 (81%), Gaps = 15/307 (4%)
Query: 1 MEVATASAPIFGLRTRMLATPPRTSPRTVNCNR-----------NLSTSFISPFAN-GSV 48
MEVATA++ F L MLA P +S RTV R +LSTSF++P+A S
Sbjct: 1 MEVATAASS-FALNKPMLALP--SSSRTVTPIRCMNTSTSPVRTSLSTSFVAPYAGICSA 57
Query: 49 SSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYL 108
SS FSG +LRP LNP SF S + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYL
Sbjct: 58 SSPFSGHKLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYL 117
Query: 109 GMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYV 168
GMS VPSVTELILAEFLYLQYED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YV
Sbjct: 118 GMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177
Query: 169 KPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMK 228
KPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+QPI R +GQATDV +AR+E+
Sbjct: 178 KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARREVN 237
Query: 229 NVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSD 288
NVK ELVKLYAKH KTPEQIEADI+RPKYFSPSEAVEYGIIDKV+Y ++ ED GVVSD
Sbjct: 238 NVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGTEDRGVVSD 297
Query: 289 LKKAQLI 295
LKKA+LI
Sbjct: 298 LKKARLI 304
>gi|297745678|emb|CBI40932.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/284 (76%), Positives = 242/284 (85%), Gaps = 7/284 (2%)
Query: 17 MLATPPRTSPRTVNCNRNLST-----SFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSK 71
MLA P T+ T + NR L++ + +SP+ GSV+SDFSG ++RP L SF S
Sbjct: 1 MLAPP--TNSGTTSSNRTLASFSLRANLLSPYVGGSVASDFSGQKIRPSSLYSASFSGSH 58
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
+ +TMVIPFT G+A +QPPPDL SYL+KNRIVYLGMS VPSVTELILAEFLYLQY+D
Sbjct: 59 AKRGGVTMVIPFTRGSALDQPPPDLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDD 118
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK PIFTLCVGNAWGEAALLL AG
Sbjct: 119 AEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKSPIFTLCVGNAWGEAALLLAAG 178
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKGNR+ALPSSTIMIKQPI R +GQATD+++ARKE+KNVKAELVKLYAKH GK+PE+IEA
Sbjct: 179 AKGNRSALPSSTIMIKQPIARFQGQATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEA 238
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
DIRRPKYFSPSEAVEYGIIDKVLY E+S ED GVV+DLKKAQLI
Sbjct: 239 DIRRPKYFSPSEAVEYGIIDKVLYNERSSEDRGVVADLKKAQLI 282
>gi|359807363|ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
gi|255635880|gb|ACU18287.1| unknown [Glycine max]
Length = 304
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/305 (71%), Positives = 245/305 (80%), Gaps = 11/305 (3%)
Query: 1 MEVATASAPIFGLRTRMLATPPRT---------SPRTVNCNRNLSTSFISPFAN-GSVSS 50
MEVAT ++ I L MLA P + + T + +LS++F++P+ S S
Sbjct: 1 MEVATTASSI-ALNKPMLALPSSSRTATPIRAMNSSTSSVRTSLSSNFVAPYTGINSAYS 59
Query: 51 DFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGM 110
FSG +LR LNP SF S + V+TMVIPF G+AWEQPPPDLASYLYKNRIVYLGM
Sbjct: 60 LFSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGM 119
Query: 111 SFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKP 170
S VPSVTELILAEFLYLQYED +KPIYLYINSTGTTKGGEKLGYETEAFAIYDVM YVKP
Sbjct: 120 SLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKP 179
Query: 171 PIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNV 230
PIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+QPI R +GQATDV +AR+E+ NV
Sbjct: 180 PIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARREVNNV 239
Query: 231 KAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLK 290
K ELVKLYAKH KTPEQIEADI+RPKYFSPSEAVEYGIIDKV+Y ++ ED GVVSDLK
Sbjct: 240 KTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGSEDRGVVSDLK 299
Query: 291 KAQLI 295
KA+LI
Sbjct: 300 KARLI 304
>gi|418731097|gb|AFX67013.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
Length = 301
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/290 (73%), Positives = 235/290 (81%), Gaps = 14/290 (4%)
Query: 6 ASAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPD 65
ASAP LR +PP S +LSTSFISPF GS+ SD SG R+RPD L P
Sbjct: 26 ASAPKRNLR----FSPPTKS--------SLSTSFISPFVGGSLFSDLSGQRIRPDSLYPS 73
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S P+ V+TMVIPF SG ++ PPDLASYL+KNRIVYLGMS VPSVTELILAEFL
Sbjct: 74 SSTGFIPKRAVVTMVIPF-SGDPSQEHPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 132
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
YLQYED +KPIYLYINSTGTTKGGEKLGYETEAFA+YDVM YVKPPIFTLCVGNAWGEAA
Sbjct: 133 YLQYEDEDKPIYLYINSTGTTKGGEKLGYETEAFAVYDVMSYVKPPIFTLCVGNAWGEAA 192
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LLL AGAKGNRAALPSSTIMIKQPI + +GQATDVE+ RKE+ NVKAELVKLY+K+ GK+
Sbjct: 193 LLLAAGAKGNRAALPSSTIMIKQPIAQFQGQATDVELMRKEVNNVKAELVKLYSKNTGKS 252
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
PE+IE DIRRPKYFSPSEAVEYGIID + YT + +D G VSDLKKAQLI
Sbjct: 253 PEEIEEDIRRPKYFSPSEAVEYGIID-MFYTMRGNKDRGFVSDLKKAQLI 301
>gi|168049469|ref|XP_001777185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671413|gb|EDQ57965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 190/227 (83%), Gaps = 1/227 (0%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ + R V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+VTEL++AE LYLQ
Sbjct: 12 QGRGRRGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQ 71
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
Y+D EK IY+YINSTGTTK GEKLGYETEAFAIYD M YVKPPIFTLCVGNAWGEAALLL
Sbjct: 72 YDDPEKSIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLL 131
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG+KGNRA LPS+TIM+KQPI + GQATD++IARKE++NVK ELVKL ++H G++PE+
Sbjct: 132 AAGSKGNRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEELVKLLSRHTGQSPEK 191
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
I DIRRPKYF P EAV+YGIIDKVLY E E + SDLKKAQLI
Sbjct: 192 ITDDIRRPKYFKPDEAVDYGIIDKVLYAE-GDEKRSIASDLKKAQLI 237
>gi|168007320|ref|XP_001756356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692395|gb|EDQ78752.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/227 (72%), Positives = 190/227 (83%), Gaps = 1/227 (0%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+S+ R V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+VTEL++AE LYLQ
Sbjct: 16 QSRGRRGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQ 75
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
Y+D EK IY+YINSTGTTK GEKLGYETEAFAIYD M YVKPPIFTLCVGNAWGEAALLL
Sbjct: 76 YDDPEKSIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLL 135
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG+KGNRA LPS+TIM+KQPI + GQATD++IARKE++NVK ELVKL ++H G+T E+
Sbjct: 136 AAGSKGNRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEELVKLISRHTGQTVEK 195
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
I DIRRPKYF P EAV+YG+IDKVLY E E + SDLKKAQLI
Sbjct: 196 ITDDIRRPKYFKPDEAVDYGLIDKVLYAE-GDEKRSIASDLKKAQLI 241
>gi|115435898|ref|NP_001042707.1| Os01g0271400 [Oryza sativa Japonica Group]
gi|113532238|dbj|BAF04621.1| Os01g0271400 [Oryza sativa Japonica Group]
Length = 298
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/220 (80%), Positives = 198/220 (90%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 79 VVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 138
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGEAALLL AGAKGN
Sbjct: 139 IYLYINSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGN 198
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RAALPSSTIMIKQPIGR +GQATDV+IARKE++NVK E++KL ++H GK+ E+I DI+R
Sbjct: 199 RAALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKR 258
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
PKYFSPSEAV+YGIIDKVLY EKS ED GVVS+LK++ LI
Sbjct: 259 PKYFSPSEAVDYGIIDKVLYNEKSQEDGGVVSELKRSNLI 298
>gi|226531596|ref|NP_001140352.1| uncharacterized protein LOC100272400 [Zea mays]
gi|194699128|gb|ACF83648.1| unknown [Zea mays]
gi|414876902|tpg|DAA54033.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 289
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/298 (64%), Positives = 218/298 (73%), Gaps = 12/298 (4%)
Query: 1 MEVATA---SAPIFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRL 57
ME A A S P L R L +PPR P + + L+ P A F
Sbjct: 1 MEAAAAAFLSPPRVALDVRTLFSPPRCLPVSPSSQLRLAAR---PRALAGAKPRFLSPHR 57
Query: 58 RPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVT 117
P + + V+ MV+PF G AWEQPPPDLAS+LYKNRIVYLGM VPSVT
Sbjct: 58 EP------AVDGGRGARDVVAMVVPFLRGAAWEQPPPDLASFLYKNRIVYLGMCLVPSVT 111
Query: 118 ELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 177
EL+LAEFLYLQY+D EKPIY+YINSTGTTK GEKLGYETEA A+YD M YVK PIFTLCV
Sbjct: 112 ELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCV 171
Query: 178 GNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKL 237
GNAWGEAALLL AGAKGNRAALPSSTIMIKQPIGR +GQATDV+IARKE++NVK E+VKL
Sbjct: 172 GNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMVKL 231
Query: 238 YAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
A+H GK E+I DIRRPKYFSPSEAV+YGIIDKV+Y EK ED GVVS+LK++ LI
Sbjct: 232 LARHIGKPMEEIARDIRRPKYFSPSEAVDYGIIDKVIYNEKIQEDGGVVSELKRSNLI 289
>gi|242052591|ref|XP_002455441.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
gi|241927416|gb|EES00561.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
Length = 291
Score = 336 bits (861), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 177/220 (80%), Positives = 195/220 (88%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAWEQPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 72 VVAMVVPFLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 131
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINSTGTTK GEKLGYETEA A+YD M YVK PIFTLCVGNAWGEAALLL AGAKGN
Sbjct: 132 IYLYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGN 191
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RAALPSSTIMIKQPIGR +GQATDV+IARKE++NVK E+VKL A+H GK E+I DIRR
Sbjct: 192 RAALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMVKLLARHIGKPIEEIARDIRR 251
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
PKYFSPSEAV+YGIIDKV+Y EK ED GVVS+LK++ LI
Sbjct: 252 PKYFSPSEAVDYGIIDKVIYNEKIQEDGGVVSELKRSNLI 291
>gi|168033939|ref|XP_001769471.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679182|gb|EDQ65632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/223 (71%), Positives = 184/223 (82%), Gaps = 1/223 (0%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RS V+TMVIPF G A +QPPPDL SYL+KNRIV+L MS VP+ TEL +AE LYLQY+D
Sbjct: 16 RSGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAFTELFMAELLYLQYDDP 75
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ IY+YINSTGTTK GEKLGYETEAFAIYD M Y+KPPIFTLCVGNAWGEAALLL AG+
Sbjct: 76 EESIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYMKPPIFTLCVGNAWGEAALLLAAGS 135
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KGNRA LPS+TIM+KQPI + GQATD++IARKE++NVK E VKL ++H G+ PE+I D
Sbjct: 136 KGNRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEEFVKLLSRHTGQPPEKITGD 195
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
IRRPKYF P AV+YGIIDKVLY E E + SDLKKAQLI
Sbjct: 196 IRRPKYFKPDGAVDYGIIDKVLYVE-GDEKRSIASDLKKAQLI 237
>gi|326495296|dbj|BAJ85744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 171/216 (79%), Positives = 192/216 (88%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MVIPF GTA+EQPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQYED EKP
Sbjct: 64 VVAMVIPFLRGTAFEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKP 123
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINSTGTTK GEKLGYETEAFA+YD M YVK PIFTLC+GNAWGEAALLL AGAKGN
Sbjct: 124 IYMYINSTGTTKNGEKLGYETEAFAVYDAMRYVKIPIFTLCIGNAWGEAALLLAAGAKGN 183
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RAALPSSTIM+KQPIGR +GQATDV+IARKE++NVK E+VKL ++H GK E+I DIRR
Sbjct: 184 RAALPSSTIMMKQPIGRFQGQATDVDIARKEIRNVKIEMVKLLSRHIGKPMEEIARDIRR 243
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKK 291
PKYFSPSEAV+YGIIDKVL+ KS D G+VS++KK
Sbjct: 244 PKYFSPSEAVDYGIIDKVLHNVKSQTDAGLVSEVKK 279
>gi|357130629|ref|XP_003566950.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 1 [Brachypodium
distachyon]
gi|357130631|ref|XP_003566951.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like isoform 2 [Brachypodium
distachyon]
Length = 293
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/293 (64%), Positives = 219/293 (74%), Gaps = 5/293 (1%)
Query: 1 MEVATASAP--IFGLRTRMLATPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLR 58
ME A A +P + L R L +PP P + + L+ + S SS + R R
Sbjct: 1 MEAAAALSPPRVAALDARALFSPPTALPSSPSSRLRLAARPRA--LAASPSSVVATPRQR 58
Query: 59 PDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTE 118
+PD R V+ MVIPF G A+EQPPPDLAS+LYKNRIVYLGM VPSVTE
Sbjct: 59 FLTPHPDPAAGRGARD-VVAMVIPFLRGHAFEQPPPDLASFLYKNRIVYLGMCLVPSVTE 117
Query: 119 LILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 178
L+LAEFLYLQYED EKPIY+YINSTGTTK GEKLGYETEAFA+YD M YVK PIFTLC+G
Sbjct: 118 LMLAEFLYLQYEDAEKPIYMYINSTGTTKNGEKLGYETEAFAVYDAMRYVKIPIFTLCIG 177
Query: 179 NAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLY 238
NAWGEAALLL AGAKGNRAALPSSTIM+KQPIGR +GQATDV+IARKE++NVK E+VKL
Sbjct: 178 NAWGEAALLLAAGAKGNRAALPSSTIMMKQPIGRFQGQATDVDIARKEIRNVKIEMVKLL 237
Query: 239 AKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKK 291
++H GK ++I DIRRPKYFSPSEAV+YGIIDKVL KS D GVVS++KK
Sbjct: 238 SRHIGKPMDEIARDIRRPKYFSPSEAVDYGIIDKVLQNVKSQTDAGVVSEVKK 290
>gi|56783783|dbj|BAD81195.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|125569868|gb|EAZ11383.1| hypothetical protein OsJ_01248 [Oryza sativa Japonica Group]
Length = 306
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/228 (71%), Positives = 190/228 (83%), Gaps = 8/228 (3%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
V+ MV+PF GTAW+QPPPDLAS+LYKNRIVYLGM VPSVTEL+LAEFLYLQY+D EKP
Sbjct: 79 VVAMVVPFLRGTAWQQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKP 138
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK-- 193
IYLYINSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGEAALLL AGAK
Sbjct: 139 IYLYINSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVS 198
Query: 194 ---GNRAALPSSTIMIK---QPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPE 247
++ + I++ QPIGR +GQATDV+IARKE++NVK E++KL ++H GK+ E
Sbjct: 199 VVFASKKYEDNDLILLTFNVQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVE 258
Query: 248 QIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
+I DI+RPKYFSPSEAV+YGIIDKVLY EKS ED GVVS+LK++ LI
Sbjct: 259 EIAQDIKRPKYFSPSEAVDYGIIDKVLYNEKSQEDGGVVSELKRSNLI 306
>gi|125525351|gb|EAY73465.1| hypothetical protein OsI_01344 [Oryza sativa Indica Group]
Length = 284
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/284 (60%), Positives = 206/284 (72%), Gaps = 15/284 (5%)
Query: 20 TPPRTSPRTVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITM 79
+PPR SP + +T SP + + S S L P +P + ++
Sbjct: 8 SPPRVSP---DARAMFATLPASPSPHLTHSHSHSTHALSPASQHPTTAGGGGHQA----A 60
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
V+PF S TA QPPPDLAS+LYK RIVYLGM +PSVTEL+LAEFLYLQY+D EKPIYLY
Sbjct: 61 VVPFLSVTACHQPPPDLASFLYKYRIVYLGMCLLPSVTELMLAEFLYLQYDDAEKPIYLY 120
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK-----G 194
INSTGTTK GEKLGYETEAFAIYD M YVK PIFTLCVGNAWGEAALLL AGAK
Sbjct: 121 INSTGTTKNGEKLGYETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVSVVFA 180
Query: 195 NRAALPSSTIMIK---QPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
++ + I++ QPIGR +GQATDV+IARKE++NVK E++KL ++H GK+ E+I
Sbjct: 181 SKKYEDNDLILLTFNVQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQ 240
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
DI+RPKYFSPSEAV+YGIIDKVLY EKS ED GVVS+LK++ LI
Sbjct: 241 DIKRPKYFSPSEAVDYGIIDKVLYNEKSQEDGGVVSELKRSNLI 284
>gi|302801676|ref|XP_002982594.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
gi|302823376|ref|XP_002993341.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300138850|gb|EFJ05603.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300149693|gb|EFJ16347.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
Length = 218
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 183/216 (84%)
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
VIPF G A QPPPDL SYL+ NRIV+LGMS VP+VTELI+AEFLYLQ+ D EKPIY+Y
Sbjct: 2 VIPFVRGDASAQPPPDLPSYLFHNRIVFLGMSLVPAVTELIMAEFLYLQFVDPEKPIYMY 61
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INSTGTTK GEKLGYETEA A+YD M YVKPPIFTLCVGNAWGEAALLL AGAKGNR+AL
Sbjct: 62 INSTGTTKDGEKLGYETEALAMYDTMQYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSAL 121
Query: 200 PSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYF 259
PS+TIM+K+PI + GQATD++IAR+E++N+K +LV+L +H G+ ++IE DIRRPKYF
Sbjct: 122 PSTTIMLKEPIAQFRGQATDIDIARREVRNLKKDLVELLERHTGQPADKIEEDIRRPKYF 181
Query: 260 SPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
SP EAV+YG+IDKVL TEK + GVV L++AQL+
Sbjct: 182 SPDEAVDYGLIDKVLRTEKGEKSKGVVDQLRQAQLL 217
>gi|2245061|emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
gi|7268455|emb|CAB80975.1| Clp proteinase like protein [Arabidopsis thaliana]
Length = 241
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/172 (80%), Positives = 153/172 (88%)
Query: 39 FISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLAS 98
F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLAS
Sbjct: 49 FLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLAS 108
Query: 99 YLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEA 158
YL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEA
Sbjct: 109 YLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEA 168
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
FAIYDVMGYVKPPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQ +
Sbjct: 169 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQVV 220
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 269 IIDKVLYTEKSPEDHGVVSDLKKAQLI 295
+I +V+Y E+ +D GVVSDLKKAQLI
Sbjct: 215 MIKQVVYNERGSQDRGVVSDLKKAQLI 241
>gi|414876901|tpg|DAA54032.1| TPA: hypothetical protein ZEAMMB73_875629 [Zea mays]
Length = 186
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/186 (79%), Positives = 164/186 (88%)
Query: 110 MSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK 169
M VPSVTEL+LAEFLYLQY+D EKPIY+YINSTGTTK GEKLGYETEA A+YD M YVK
Sbjct: 1 MCLVPSVTELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKLGYETEALAVYDAMRYVK 60
Query: 170 PPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKN 229
PIFTLCVGNAWGEAALLL AGAKGNRAALPSSTIMIKQPIGR +GQATDV+IARKE++N
Sbjct: 61 VPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIGRFQGQATDVDIARKEIRN 120
Query: 230 VKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDL 289
VK E+VKL A+H GK E+I DIRRPKYFSPSEAV+YGIIDKV+Y EK ED GVVS+L
Sbjct: 121 VKIEMVKLLARHIGKPMEEIARDIRRPKYFSPSEAVDYGIIDKVIYNEKIQEDGGVVSEL 180
Query: 290 KKAQLI 295
K++ LI
Sbjct: 181 KRSNLI 186
>gi|255071097|ref|XP_002507630.1| predicted protein [Micromonas sp. RCC299]
gi|226522905|gb|ACO68888.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 289
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 155/197 (78%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I+ VIP G A Q PPDL S+++K RIVYLGM+ VPSVTELILAE LYLQYED KPI
Sbjct: 22 ISAVIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKTKPI 81
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YLYINSTGT+K G+K GY+TEAFAIYD + YV P+ T+ VG AWGEAA+LL +G KGNR
Sbjct: 82 YLYINSTGTSKEGQKYGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLASGEKGNR 141
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
AALPS++IMIKQPI GQATD+EI RKEM+N K + ++L +K K E++E DI RP
Sbjct: 142 AALPSASIMIKQPIDAFRGQATDLEIQRKEMRNTKKQTLELLSKGINKPIEELEKDINRP 201
Query: 257 KYFSPSEAVEYGIIDKV 273
KYF+P EAV+YG+IDK+
Sbjct: 202 KYFNPWEAVDYGLIDKL 218
>gi|145343664|ref|XP_001416434.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576659|gb|ABO94727.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 158/198 (79%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
IT VIP G A Q PPDL S+++K RIVYLGM+ VPSVTELILAE LYLQYED +KPI
Sbjct: 52 ITQVIPSLQGDASTQSPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPI 111
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
LYINSTG++K G+K GY+TEAFAIYD + YV PP+ T+ VG AWGEAA+LL AG++GNR
Sbjct: 112 QLYINSTGSSKDGQKYGYDTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNR 171
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
AALPS++IM+KQP+ GQA+++EI R+EM+N K +++++ AK GK +E+DI RP
Sbjct: 172 AALPSASIMLKQPLSAFRGQASELEIQRQEMRNTKRQMLEILAKTTGKDIATVESDINRP 231
Query: 257 KYFSPSEAVEYGIIDKVL 274
YF P+EAV+YG+IDKVL
Sbjct: 232 LYFDPTEAVKYGLIDKVL 249
>gi|308799978|ref|XP_003074770.1| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
gi|119358788|emb|CAL52028.2| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC), partial [Ostreococcus tauri]
Length = 244
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 160/206 (77%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ PR+ +I VIP G A Q PPDL S++++ RIVYLGM+ VPSVTELILAE LYLQ
Sbjct: 39 RNAPRTRIIRAVIPSLQGDAATQSPPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQ 98
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
YED +KPI LYINSTG++K G+K GY++EAFAIYD + YV PP+ T+ VG AWGEAA+LL
Sbjct: 99 YEDKKKPIQLYINSTGSSKDGKKYGYDSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLL 158
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
+G+KG RAALPS++IM+KQP+ GQA+++EI R+EM+N K +++ + AK G+
Sbjct: 159 ASGSKGQRAALPSASIMLKQPLSSFRGQASELEIQRQEMRNTKKQMLDILAKTTGRDIAT 218
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE DI RP YF PSEA++YG+IDKVL
Sbjct: 219 IETDINRPLYFEPSEAIKYGLIDKVL 244
>gi|412990157|emb|CCO19475.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 236
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 66 SFCKSKPRSPVITM----VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELIL 121
S +SK + P I VIP G A Q PPDL SY++K RIVYLGM+ VPSVTELIL
Sbjct: 23 SAARSKVKCPRICHEIKAVIPSLQGDASSQLPPDLPSYIFKERIVYLGMTLVPSVTELIL 82
Query: 122 AEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
AE LYLQYED KPI+LYINSTGT+K G+K GY++EAFAIYD + YVKPP+ T+ +G AW
Sbjct: 83 AELLYLQYEDNNKPIHLYINSTGTSKEGQKYGYDSEAFAIYDTIQYVKPPVHTIAIGTAW 142
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKH 241
GEAA+LL AG KG+RAALPS++IMIKQPI GQA+++EI R E +N K++ +K+ +
Sbjct: 143 GEAAMLLSAGKKGHRAALPSASIMIKQPINSFRGQASELEIQRNETRNTKSQTLKILSLS 202
Query: 242 FGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GK+ E++E DI RP+YF P EA +YG+IDKV
Sbjct: 203 TGKSIEEVEKDINRPRYFDPQEAKDYGLIDKV 234
>gi|148908273|gb|ABR17251.1| unknown [Picea sitchensis]
Length = 158
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 141/158 (89%)
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINSTGTTK GEKLGYETEAFA+YD M YVKPPIFTLC+GNAWGEA+LLL AGAKGNRA
Sbjct: 1 MYINSTGTTKDGEKLGYETEAFAVYDTMRYVKPPIFTLCIGNAWGEASLLLAAGAKGNRA 60
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LPSSTIMIKQPI ++ GQATD+++ARKE++NVK ELV LYA+H G E+IE DIRRPK
Sbjct: 61 SLPSSTIMIKQPIAQVRGQATDIDLARKEVRNVKNELVALYARHTGHPKEKIEQDIRRPK 120
Query: 258 YFSPSEAVEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
YFSP EA+EYGIIDKV+Y++K ED GVV+DLKK+QLI
Sbjct: 121 YFSPQEAIEYGIIDKVIYSDKGTEDRGVVADLKKSQLI 158
>gi|217069988|gb|ACJ83354.1| unknown [Medicago truncatula]
Length = 216
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 172/218 (78%), Gaps = 13/218 (5%)
Query: 1 MEVATASAPIFGLRTR-MLATPPRTSPRTVNCNR---------NLSTSFISPF-ANGSVS 49
MEVATA+ L + ML +P +S RT++ R ++ST F++P A S +
Sbjct: 1 MEVATANVSFTFLSKKPMLISP--SSSRTLSPIRPIKSSFFRNSISTDFVAPSSAITSST 58
Query: 50 SDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLG 109
S FSG +LRP CLNP +F S + V+TMVIPF+ GTAWEQPPPDLASYLYKNRIVYLG
Sbjct: 59 SHFSGHKLRPPCLNPATFQSSGSKRGVVTMVIPFSRGTAWEQPPPDLASYLYKNRIVYLG 118
Query: 110 MSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVK 169
MS VPSVTEL++AEFLYLQY+D KPIY+YINSTGTTKGGEKLGYETEA A+YD+M Y+K
Sbjct: 119 MSLVPSVTELMVAEFLYLQYDDETKPIYMYINSTGTTKGGEKLGYETEALAVYDLMRYIK 178
Query: 170 PPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK 207
PPIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMI+
Sbjct: 179 PPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIR 216
>gi|307109710|gb|EFN57947.1| hypothetical protein CHLNCDRAFT_11056, partial [Chlorella
variabilis]
Length = 200
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 157/199 (78%), Gaps = 1/199 (0%)
Query: 80 VIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
VIP +G A +Q PPDL SYL+K RIVY+GMS VP+VTEL+LAE LYLQY++ +PIY+Y
Sbjct: 2 VIPALAGDATDQTPPDLPSYLFKERIVYVGMSLVPAVTELVLAEMLYLQYDNPTRPIYMY 61
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INSTG KG KLGYE+EAFAIYD M Y+KPP+ T+CVG+A+GEAA+LL AG G RAAL
Sbjct: 62 INSTGVIKGSGKLGYESEAFAIYDTMRYIKPPVATVCVGSAFGEAAMLLAAGEAGRRAAL 121
Query: 200 PSSTIMIKQPIGR-IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
PS++IMI+QP+ R + QA+D++I R E++ AE+V+L +KH G EQ+ DI RPKY
Sbjct: 122 PSTSIMIRQPMQRYTQMQASDIDIYRNELRKTNAEVVRLLSKHTGHGEEQVARDISRPKY 181
Query: 259 FSPSEAVEYGIIDKVLYTE 277
F+P EA+EYGIID+VL E
Sbjct: 182 FNPYEAIEYGIIDRVLEPE 200
>gi|384252076|gb|EIE25553.1| hypothetical protein COCSUDRAFT_46762 [Coccomyxa subellipsoidea
C-169]
Length = 216
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 150/195 (76%), Gaps = 1/195 (0%)
Query: 81 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYI 140
+P G A EQ PPDL SYL+K RIVYLGMS VP+VTEL+LAE LYLQY++ +PI++YI
Sbjct: 1 MPQLQGDATEQTPPDLPSYLFKERIVYLGMSLVPAVTELLLAELLYLQYDNPTRPIFMYI 60
Query: 141 NSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
NS G KGG+KLGYE+EAFAIYD M Y+KP + TLCVGNA+GE+A+LL AG G R ALP
Sbjct: 61 NSAGVQKGGDKLGYESEAFAIYDTMKYIKPEVHTLCVGNAFGESAMLLAAGTPGKRGALP 120
Query: 201 SSTIMIKQPIGRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYF 259
SSTIM++QP+ R + QA+D++I R E++ K E+V L KH GK ++IE I RP YF
Sbjct: 121 SSTIMLRQPMQRFAQMQASDIDIYRNELRKTKNEIVHLLGKHIGKDADEIERVIARPTYF 180
Query: 260 SPSEAVEYGIIDKVL 274
+P EAV++GIID VL
Sbjct: 181 NPYEAVDFGIIDSVL 195
>gi|359496370|ref|XP_002267289.2| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like [Vitis vinifera]
Length = 139
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/139 (78%), Positives = 120/139 (86%), Gaps = 8/139 (5%)
Query: 165 MGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--------PIGRIEGQ 216
MGYVK IFTLCVGN WGEAALLL AGAKGNR+ALPSSTIM+KQ PI R++GQ
Sbjct: 1 MGYVKSLIFTLCVGNPWGEAALLLVAGAKGNRSALPSSTIMLKQSCPPINLHPIARLQGQ 60
Query: 217 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYT 276
ATD+++ARKE+KNVKAELVKLYAKH GK+PEQIEADIRRPKYFSPSE VEY IIDKVLY
Sbjct: 61 ATDIDLARKEVKNVKAELVKLYAKHVGKSPEQIEADIRRPKYFSPSEGVEYSIIDKVLYN 120
Query: 277 EKSPEDHGVVSDLKKAQLI 295
E+S ED GVV+DLKKAQLI
Sbjct: 121 ERSSEDRGVVADLKKAQLI 139
>gi|428305262|ref|YP_007142087.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428246797|gb|AFZ12577.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 219
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 142/201 (70%), Gaps = 1/201 (0%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+ + P+ + PPPDL S L K RIVYLGM VPSVTELI+AE LYLQYED EK
Sbjct: 4 PIQAVQSPYYGDNFYRTPPPDLPSMLLKERIVYLGMPLVPSVTELIVAELLYLQYEDPEK 63
Query: 135 PIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
PI +YINSTGT+ GE +G+ETEAFAI D M Y+KPPI T+C+G+A G AA+LL AG K
Sbjct: 64 PIKIYINSTGTSNYNGEPIGFETEAFAICDTMSYIKPPIHTICIGSAMGMAAMLLSAGTK 123
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R +LP++ I++ QP GQATD++I KE+ KA L+++ +K+ G PE+I D+
Sbjct: 124 GCRVSLPNANIVLHQPKAYARGQATDIQIRAKEVLANKATLLEILSKNTGNAPEKIAKDM 183
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R Y +P EA EYG+ID+VL
Sbjct: 184 DRMLYMTPFEAKEYGLIDQVL 204
>gi|296085709|emb|CBI29508.3| unnamed protein product [Vitis vinifera]
Length = 169
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/145 (75%), Positives = 120/145 (82%), Gaps = 8/145 (5%)
Query: 159 FAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--------PI 210
AI YVK IFTLCVGN WGEAALLL AGAKGNR+ALPSSTIM+KQ PI
Sbjct: 25 LAIIFCCRYVKSLIFTLCVGNPWGEAALLLVAGAKGNRSALPSSTIMLKQSCPPINLHPI 84
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R++GQATD+++ARKE+KNVKAELVKLYAKH GK+PEQIEADIRRPKYFSPSE VEY II
Sbjct: 85 ARLQGQATDIDLARKEVKNVKAELVKLYAKHVGKSPEQIEADIRRPKYFSPSEGVEYSII 144
Query: 271 DKVLYTEKSPEDHGVVSDLKKAQLI 295
DKVLY E+S ED GVV+DLKKAQLI
Sbjct: 145 DKVLYNERSSEDRGVVADLKKAQLI 169
>gi|119512062|ref|ZP_01631156.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463288|gb|EAW44231.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 220
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + + PPPDL S L K RIVYLGM VP+VTELI+AE LYLQ +D E
Sbjct: 4 SPIKAVQAPYQGDSFYRTPPPDLPSLLMKERIVYLGMPLVPAVTELIIAELLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP S+I++ QP +GQATD++I +E+ KA LV + G+ PE+I D
Sbjct: 124 KGCRASLPHSSIILHQPKSYAQGQATDIQIRAREVLINKASLVDILGHTTGQAPEKITKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P EA +YG+ID+V E+
Sbjct: 184 MDRLLYMTPYEARDYGLIDRVFEKEE 209
>gi|428299970|ref|YP_007138276.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
gi|428236514|gb|AFZ02304.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
6303]
Length = 220
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 148/202 (73%), Gaps = 1/202 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + ++ ++ PPPDL S L K RIVYLG+ VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAAYSGENSYRTPPPDLESLLLKERIVYLGLPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ G+ +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYTGDPVGFETEAFAIYDTMKYIKPPIHTICMGSAMGMAAMLLAAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP+++I++ QP +GQATD++I KE+ KA ++ +++++ G+T E+IE D
Sbjct: 124 KGCRASLPNASIVLHQPKSYAQGQATDIQIRAKEVLANKATMLDIFSRNTGQTKEKIEKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
+ R Y +P +AV YG+ID+V
Sbjct: 184 MDRLFYITPHDAVAYGLIDRVF 205
>gi|428217036|ref|YP_007101501.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
gi|427988818|gb|AFY69073.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena sp.
PCC 7367]
Length = 218
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%), Gaps = 1/197 (0%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
+ A+ PPPDL S L K RIVY+GM V SVTELI+AE LYLQYED EKPIY+YINS
Sbjct: 12 YYGDAAFRSPPPDLQSLLLKERIVYIGMPLVASVTELIVAELLYLQYEDTEKPIYIYINS 71
Query: 143 TGTTKG-GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
TGT +G GE +G+ETEAFAI D + Y+KPP+ T+C+G A G AA+LL +G KG RA+LP+
Sbjct: 72 TGTDRGDGEPVGFETEAFAICDTLKYIKPPVHTICIGTAAGSAAMLLSSGTKGCRASLPN 131
Query: 202 STIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSP 261
+ I+++QP GQATD++I KE+ + ++++ AK+ G+ E+I D+ R Y S
Sbjct: 132 ANIVLRQPKSYARGQATDIQIRAKEVLANRDTVLEMLAKNTGQPREKISKDMDRLLYMSA 191
Query: 262 SEAVEYGIIDKVLYTEK 278
+A EYG+ID+VL + K
Sbjct: 192 YDAKEYGLIDRVLESRK 208
>gi|162606046|ref|XP_001713538.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794458|gb|AAK39833.1|AF165818_41 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 254
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKP+Y+Y+NSTGT+ G G+ETEAFA
Sbjct: 66 HNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAGFETEAFA 125
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D M Y+KPP+ T+CVG A+G A+LL +G G RAALP++TIMI QP R GQA+D+
Sbjct: 126 IADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPTSRARGQASDI 185
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
I +E+ + + ++ A+ G++ E++ D R KY SP EAVEYGIID++L T+K
Sbjct: 186 AIKAREVLYNRKQCFEILAETSGQSLEKVMKDASRTKYLSPMEAVEYGIIDRILDTQKKS 245
Query: 281 E 281
+
Sbjct: 246 D 246
>gi|330038335|ref|XP_003239570.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
gi|327206494|gb|AEA38672.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
Length = 243
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEK 151
PPDL S L NRIVYLGM VP+VTELI+AEFL+LQYE+ EKP+++Y+NSTGT+ G
Sbjct: 49 PPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLFLQYENSEKPLFMYLNSTGTSNPDGSS 108
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIG 211
G+ETEAFAI D M Y+KP + T+CVG A+G +A+LL G R+ALP++TIMI QP
Sbjct: 109 AGFETEAFAIADTMNYIKPSVHTICVGQAFGTSAMLLSNGEVNCRSALPNATIMIHQPRS 168
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ GQA+D+ I +E+ + + ++ AK+ G++ ++I D R KY SP EA+EYG+ID
Sbjct: 169 QARGQASDIAIKAREVLYNRKQCFEIIAKNSGQSLQKIMKDASRTKYLSPQEAMEYGLID 228
Query: 272 KVLYTEK 278
K+L T K
Sbjct: 229 KILETPK 235
>gi|399949581|gb|AFP65239.1| ATP-dependent Clp protease proteolytic subunit [Chroomonas
mesostigmatica CCMP1168]
Length = 264
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKPI++Y+NSTGT+ G G+ETEAFAI
Sbjct: 75 NRIVYLGMPLVPAVTELIVAEFLYLQYENAEKPIFMYLNSTGTSNPDGSSAGFETEAFAI 134
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
D M Y+KPP+ T+CVG A G A+LL +G G R+ALP++TIM+ QP + GQA+D+
Sbjct: 135 ADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRSALPNATIMVHQPRTQARGQASDIA 194
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
I +E+ + + ++ AK G++ +++ D R KY SP EAVEYGIIDK+L ++KS
Sbjct: 195 IKAREVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLSPKEAVEYGIIDKILESQKS 252
>gi|160331817|ref|XP_001712615.1| clpP1 [Hemiselmis andersenii]
gi|159766064|gb|ABW98290.1| clpP1 [Hemiselmis andersenii]
Length = 257
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRIVYLGM VP+VTELI+AEFLYLQYE+ +KP+++Y+NSTGT+ G G+ETEAFAI
Sbjct: 68 NRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSNPDGSSAGFETEAFAI 127
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
D M Y+KPP+ T+CVG A G A+LL +G G RAALP+STIM+ QP + +GQA+D+
Sbjct: 128 ADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRAALPNSTIMVHQPRTQAKGQASDIA 187
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
I KE+ + + ++ AK G++ +++ D R KY +P EAVEYGIIDK+L + KS
Sbjct: 188 IKAKEVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLTPGEAVEYGIIDKILESNKS 245
>gi|323455402|gb|EGB11270.1| hypothetical protein AURANDRAFT_21676 [Aureococcus anophagefferens]
Length = 221
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GE 150
PPPDLAS L NRIVYLGM V +VTELI+AE LYL YE KP+ LYINS GT G+
Sbjct: 18 PPPDLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGTVNSQGQ 77
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D M Y+KPP+ T+CVG A+G AA+LL G KG R LP+++IM+ QP
Sbjct: 78 SVGFETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQPR 137
Query: 211 GRIEGQATDVEI-ARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
+ GQA+D+ I AR+ M N K +L A+ G++ +++ AD R KY P EAVEYG+
Sbjct: 138 SQARGQASDIAIRAREVMSNRKVS-CELMARACGRSVDEVMADASRTKYLQPDEAVEYGL 196
Query: 270 IDKVLYT 276
IDKVL+
Sbjct: 197 IDKVLHN 203
>gi|88770682|gb|ABD51944.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodomonas
salina]
Length = 262
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRIVYLGM VP+VTELI+AEFLYLQYE+ EKP+++Y+NSTGT+ G G+ETEAFAI
Sbjct: 73 NRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTSNPDGSSAGFETEAFAI 132
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
D M YVKPP+ T+CVG A+G +LL +G +RAALP++TIMI QP R +GQA+D+
Sbjct: 133 ADTMNYVKPPVHTICVGQAFGTCVMLLSSGEPTHRAALPNATIMIHQPTARAKGQASDIA 192
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
I +E+ + + ++ A+ G+ E++ D R KY +P+EAVEYGIIDK+L + KS
Sbjct: 193 IKAREVLYNRKQCFEIIAETSGQPLEKVMKDASRTKYLTPAEAVEYGIIDKILESTKS 250
>gi|452825129|gb|EME32127.1| ATP-dependent Clp protease, protease subunit isoform 1 [Galdieria
sulphuraria]
gi|452825130|gb|EME32128.1| ATP-dependent Clp protease, protease subunit isoform 2 [Galdieria
sulphuraria]
Length = 275
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAI 161
NRI+YLGM +P+VTELI+AEFLYLQYE EKPIYLYINSTGT+ G G+ETEAFA+
Sbjct: 85 NRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTSNPDGSTAGFETEAFAV 144
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
D M YVKPP+ T+CVG A+G AALLL AG KG RAALP +T+M+ QP +G A+D+
Sbjct: 145 CDTMRYVKPPVHTICVGQAYGTAALLLAAGEKGFRAALPHATVMLHQPRSSTQGPASDIA 204
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
I +E+ + +L ++ G+ E+I+ D +R KY +P EA EYGIIDK+L + K P
Sbjct: 205 IKAREVLYNRKVTFELLSESTGQPFEKIQKDSQRTKYMTPEEAKEYGIIDKILTSTKEP 263
>gi|427736766|ref|YP_007056310.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371807|gb|AFY55763.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 221
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 142/202 (70%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+ M P+T + PPPDL S L K RIVYLG VP VT+LI+AE LYLQ ED
Sbjct: 3 HSPIKAMQAPYTGDNFYRTPPPDLPSLLLKERIVYLGAPLVPEVTKLIIAELLYLQSEDP 62
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+KPI +YINS GT+ G + + +ETEAFAIYD M Y+KPPI T+C+G A G AA+LL AG
Sbjct: 63 DKPIKIYINSVGTSFGDQPIAFETEAFAIYDTMRYIKPPIHTICIGQAMGMAAMLLSAGT 122
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RAALP ++I++KQPI GQATD++I KE+ K +V+++A++ G+ +++ D
Sbjct: 123 KGCRAALPHASIVLKQPISGTRGQATDIQIMAKEVFVNKEAMVEIFARNTGQDKAKVKKD 182
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
+ R Y +P +AVEYG+ID+V
Sbjct: 183 MDRLFYITPDQAVEYGLIDRVF 204
>gi|17231850|ref|NP_488398.1| ATP-dependent Clp protease-like protein [Nostoc sp. PCC 7120]
gi|17133494|dbj|BAB76057.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 220
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ +++ PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D +
Sbjct: 4 SPIKAVQAPYYGDSSYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LPSS+I++ QP +GQATD++I +E+ K +V ++A+ G+ PE+I D
Sbjct: 124 KGCRASLPSSSIILHQPKSYAQGQATDIQIRAREVLVNKGSMVDIFARTTGQAPEKITKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P +A +YG+ID+V E+
Sbjct: 184 MDRLLYMTPYQAKDYGLIDRVFEKEE 209
>gi|359497547|ref|XP_003635562.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 4, chloroplastic-like, partial [Vitis vinifera]
Length = 129
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 121/129 (93%)
Query: 167 YVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKE 226
YVK PIFTLCVGNAWGEAALLL AGAKGNR+ALPSSTIMIKQPI R +GQATD+++ARKE
Sbjct: 1 YVKSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQPIARFQGQATDIDLARKE 60
Query: 227 MKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDHGVV 286
+KNVKAELVKLYAKH GK+PE+IEADIRRPKYFSPSEAVEYGIIDKVLY E+S ED GVV
Sbjct: 61 VKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERSSEDRGVV 120
Query: 287 SDLKKAQLI 295
+DLKKAQLI
Sbjct: 121 ADLKKAQLI 129
>gi|220906938|ref|YP_002482249.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7425]
gi|219863549|gb|ACL43888.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 218
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 147/209 (70%), Gaps = 1/209 (0%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RSP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+AE L+LQY+D
Sbjct: 2 RSPIQAVQSPYYGDAFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIIAELLFLQYDDP 61
Query: 133 EKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPI +YINSTGT++ GE +G+ETEAFAI D M Y+KPPI T+C+G A G AA+LL AG
Sbjct: 62 EKPIKIYINSTGTSRYDGEPIGFETEAFAICDTMRYIKPPIHTICIGQAMGMAAMLLSAG 121
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG RA+LP++TI++ Q GQATD++I +E+ + ++ + +++ G+ PE+I
Sbjct: 122 TKGCRASLPNATIVLHQTRSYARGQATDIQIRAREVLANREIMIDILSRNTGQPPEKISK 181
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
D+ R Y +P +AVEYG+ID+VL E P
Sbjct: 182 DMDRLFYMTPQQAVEYGLIDRVLEKEAMP 210
>gi|428224314|ref|YP_007108411.1| endopeptidase Clp [Geitlerinema sp. PCC 7407]
gi|427984215|gb|AFY65359.1| Endopeptidase Clp [Geitlerinema sp. PCC 7407]
Length = 237
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE LYLQYED EKPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 49 KERIVYLGMPLVPAVTELIIAELLYLQYEDPEKPIRIYINSTGTSSYSGEPVGFETEAFA 108
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D + Y+KPPI T+C+G+A G AA+LL AG KG RA+LP ++I++ QP GQATD+
Sbjct: 109 ICDTISYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPHASIVLHQPKSYARGQATDI 168
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+I KE+ K +V + +++ G+ PE+I D+ R Y +P EA EYG+ID+VL +++
Sbjct: 169 QIRAKEVLANKETMVSILSRNTGQAPEKIIKDMDRLLYMTPQEAKEYGLIDRVLESQE 226
>gi|22299302|ref|NP_682549.1| ATP-dependent Clp protease-like protein [Thermosynechococcus
elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
Length = 218
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE LYLQY+D EKPI +YINSTGT++ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D M Y+KPP+ T+C+G A G AA+LL AG KG RA+LP +TI++ Q +GQATD+
Sbjct: 91 ICDTMRYIKPPVHTICIGQAMGMAAMLLSAGTKGCRASLPHATIVLHQTKSYAQGQATDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTE 277
+I KE+ KA +V++ A++ G+ PE+I D+ R Y +P A EYGIID++L E
Sbjct: 151 QIRAKEVLANKAMMVEILAQNTGQPPERITRDMDRLLYMTPQMAKEYGIIDRILEPE 207
>gi|116073335|ref|ZP_01470597.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068640|gb|EAU74392.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 221
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 136/207 (65%), Gaps = 11/207 (5%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ T PPPDL S + K RIVYLG+ VTELI+A+ LYL++++
Sbjct: 8 YGDSTVLRTPPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNP 67
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 68 EKPIYFYINSTGTSWHTGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAG 127
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG RAALP S+I++ QP GQATD++I KE+ K ++++ + + G+T EQ+
Sbjct: 128 TKGQRAALPHSSIVLHQPRSGARGQATDIQIRAKEVLQNKRSMLEILSANTGRTVEQLSQ 187
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEK 278
D R Y +P +AVEYG+ID+VL + K
Sbjct: 188 DSDRMSYLNPQQAVEYGLIDRVLSSRK 214
>gi|434393185|ref|YP_007128132.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
gi|428265026|gb|AFZ30972.1| ATP-dependent Clp protease proteolytic subunit [Gloeocapsa sp. PCC
7428]
Length = 219
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 143/206 (69%), Gaps = 1/206 (0%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTEL++AE LYLQ ED
Sbjct: 2 ESPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELLIAELLYLQSEDP 61
Query: 133 EKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G A G +A+LL AG
Sbjct: 62 DKPIRVYINSTGTSGYSGELVGFETEAFAIYDTMKYIKPPIHTICIGMAMGMSAMLLSAG 121
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG RA+LP +TI++ QP +GQA+D++I KE+ KA ++ + A G+ E+IE
Sbjct: 122 TKGCRASLPHATIVLHQPKSYAQGQASDIQIRAKEVLANKAAMLDILASTTGQAREKIEK 181
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTE 277
D+ R Y SP AVEYG+ID+VL E
Sbjct: 182 DMDRIFYISPEHAVEYGLIDRVLTKE 207
>gi|428202894|ref|YP_007081483.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980326|gb|AFY77926.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 228
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 140/207 (67%), Gaps = 11/207 (5%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDV 132
+ S ++ PPPDL S L K RIVYLGM S VT+LI+A+ L+LQ++D
Sbjct: 12 YYSDVSYRTPPPDLESLLLKERIVYLGMPLFSSDDVKQQVGIDVTQLIIAQLLFLQFDDA 71
Query: 133 EKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EKPIY YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG
Sbjct: 72 EKPIYFYINSTGTSWYTGDAIGYETEAFAICDTIAYIKPPVHTICIGQAMGTAAMILSAG 131
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG RA+LP +TI++ Q +GQATD++I KE+ + K ++++ +K+ G+ E+I
Sbjct: 132 TKGCRASLPHATIVLNQSRTGAQGQATDIQIRAKEVISNKRTMLEILSKNTGQPIEKIAK 191
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEK 278
D+ R Y +P +A EYG+ID+VL + K
Sbjct: 192 DMDRTFYMTPQQAKEYGLIDRVLESRK 218
>gi|428313412|ref|YP_007124389.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255024|gb|AFZ20983.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 231
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+ + P+ T++ PPPDL S L RIVYLGM VP+VT+LI+AE L+LQY+D +K
Sbjct: 17 PIQAVQSPYYGNTSYRTPPPDLPSLLLNERIVYLGMPLVPAVTQLIIAELLFLQYQDPDK 76
Query: 135 PIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
PI +Y+NSTGT++ GE +G+ETEAFAI D M Y+KPPI T+C+G+A G AA+LL AG K
Sbjct: 77 PIKIYVNSTGTSRYDGEPIGFETEAFAICDTMSYIKPPIHTICLGSAMGMAAMLLSAGTK 136
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G RA+LP+++I++ QP GQATD++I KE+ KA ++ + +++ G+ E+I D+
Sbjct: 137 GCRASLPNASIVLHQPKSYTRGQATDIQIRAKEVLANKATMIDILSRNTGQPSEKIAKDM 196
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEKSP 280
R Y +P +A EYG+ID+VL T + P
Sbjct: 197 DRLFYMTPQQAKEYGLIDRVLETTEVP 223
>gi|75907529|ref|YP_321825.1| ATP-dependent Clp protease-like protein [Anabaena variabilis ATCC
29413]
gi|75701254|gb|ABA20930.1| Peptidase S14, ClpP [Anabaena variabilis ATCC 29413]
Length = 220
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 147/206 (71%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ ++ PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D +
Sbjct: 4 SPIKAVQAPYYGDNSYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP+++I++ QP +GQATD++I +E+ K +V ++A+ G+ PE+I D
Sbjct: 124 KGCRASLPNASIILHQPKSYAQGQATDIQIRAREVLVNKGSMVDIFARTTGQAPEKITKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P +A +YG+ID+V E+
Sbjct: 184 MDRLLYMTPYQAKDYGLIDRVFEKEE 209
>gi|427730533|ref|YP_007076770.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366452|gb|AFY49173.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 220
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 132/178 (74%), Gaps = 1/178 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+A+ LYLQ +D EKPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFA 91
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
IYD M Y+KPPI T+C+G+A G AA+LL AG KG RA+LP+++I++ QP +GQATD+
Sbjct: 92 IYDTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIILHQPKSYAQGQATDI 151
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+I KE+ KA +V + ++ G+ PE++ D+ R Y +P +A EYG+ID+V E+
Sbjct: 152 QIRAKEVLANKASMVDILSRTTGQPPEKVTKDMDRLFYMTPYQAKEYGLIDRVFEKEE 209
>gi|166368460|ref|YP_001660733.1| ATP-dependent Clp protease-like protein [Microcystis aeruginosa
NIES-843]
gi|390438072|ref|ZP_10226570.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|422301332|ref|ZP_16388700.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|425442639|ref|ZP_18822880.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|425447771|ref|ZP_18827753.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|425455949|ref|ZP_18835660.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|425462516|ref|ZP_18841990.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|425465072|ref|ZP_18844382.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|443664108|ref|ZP_21133358.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028169|emb|CAO89776.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166090833|dbj|BAG05541.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389716258|emb|CCH99491.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9717]
gi|389731600|emb|CCI04365.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9443]
gi|389792300|emb|CCI11971.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9806]
gi|389803099|emb|CCI17965.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9807]
gi|389824417|emb|CCI26623.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9808]
gi|389832762|emb|CCI23366.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9809]
gi|389838472|emb|CCI30694.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis sp. T1-4]
gi|443331651|gb|ELS46297.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 228
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 139/202 (68%), Gaps = 11/202 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 77 FYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFR 136
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q +GQATD++I KE+ K ++++++K+ G+T E++ D+ R
Sbjct: 137 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVIANKQTMLEIFSKNTGQTTEKLAKDMDRT 196
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
Y +P +A +YG+ID+VL + K
Sbjct: 197 FYLTPQQAKDYGLIDRVLESRK 218
>gi|425436519|ref|ZP_18816954.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|425450003|ref|ZP_18829835.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440752717|ref|ZP_20931920.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|389678720|emb|CCH92423.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9432]
gi|389769364|emb|CCI05783.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 7941]
gi|440177210|gb|ELP56483.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
Length = 228
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 139/202 (68%), Gaps = 11/202 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNIGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 77 FYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFR 136
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q +GQATD++I KE+ K ++++++K+ G+T E++ D+ R
Sbjct: 137 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVIANKQTMLEIFSKNTGQTTEKLAKDMDRT 196
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
Y +P +A +YG+ID+VL + K
Sbjct: 197 FYLTPQQAKDYGLIDRVLESRK 218
>gi|218245804|ref|YP_002371175.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8801]
gi|257058850|ref|YP_003136738.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8802]
gi|16506759|gb|AAL23932.1|AF423176_1 hypothetical protein [Cyanothece sp. PCC 8801]
gi|218166282|gb|ACK65019.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
gi|256589016|gb|ACU99902.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 226
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 138/203 (67%), Gaps = 11/203 (5%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPI 136
T++ PPPDL S + K RI+YLGM S VT+LI+A+ LYLQ++D +KPI
Sbjct: 14 TSFRTPPPDLESLMLKERIIYLGMPLFSSDDVKQQVGIDVTQLIIAQLLYLQFDDPDKPI 73
Query: 137 YLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
Y YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG
Sbjct: 74 YFYINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGC 133
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RA+LP +TI++ Q GQATD++I KE+ + K ++++++K+ G+ E+I D R
Sbjct: 134 RASLPHATIVLNQNRSGARGQATDIQIRAKEVLSNKQTMLEIFSKNTGQPVEKIAKDTDR 193
Query: 256 PKYFSPSEAVEYGIIDKVLYTEK 278
Y +P +A EYG+ID+VL + K
Sbjct: 194 TFYLTPQQAKEYGLIDRVLESTK 216
>gi|67921361|ref|ZP_00514879.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383635|ref|ZP_11684483.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856473|gb|EAM51714.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265221|gb|EHJ14014.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 226
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 138/203 (67%), Gaps = 11/203 (5%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPI 136
T + PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ EKPI
Sbjct: 14 TNFRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPI 73
Query: 137 YLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
Y YINSTGT+ G+ +G+ETEAFAI D M Y+KPPI T+C+G A G AA++L AG KG
Sbjct: 74 YFYINSTGTSWYTGDAIGFETEAFAICDTMNYIKPPIHTICIGQAMGTAAMILSAGTKGC 133
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RA+LP +TI++ Q +GQATD++I KE+ K ++ + A++ G+T E+I DI R
Sbjct: 134 RASLPHATIVLNQNRSGAQGQATDIQIRAKEVLQNKQTMLTILAENTGQTAEKIAKDIDR 193
Query: 256 PKYFSPSEAVEYGIIDKVLYTEK 278
Y +P++A EYG+ID+VL + K
Sbjct: 194 TFYLTPAKAKEYGLIDRVLESTK 216
>gi|218439261|ref|YP_002377590.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7424]
gi|218171989|gb|ACK70722.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 228
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY
Sbjct: 18 FRTPPPDLESLLLKERIVYLGMPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDDPDKPIYF 77
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 78 YINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCRA 137
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LP +TI++ Q +GQATD++I KE+ K +++++AK+ G+T E++ D+ R
Sbjct: 138 SLPHATIVLNQNRTGAQGQATDIQIRAKEVLANKRTMLEIFAKNTGQTVEKLAKDLDRTF 197
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y +P +A EYG+ID+VL + K
Sbjct: 198 YMTPEQAKEYGLIDRVLESRK 218
>gi|300869049|ref|ZP_07113651.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
gi|300332960|emb|CBN58845.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
Length = 222
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 137/203 (67%), Gaps = 12/203 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ LYLQ++D EKPIY
Sbjct: 11 YRTPPPDLESLLLKERIVYLGMPLFSSDEIKRNVGIDVTELIIAQLLYLQFDDPEKPIYF 70
Query: 139 YINSTGTTKGGE--KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINS+GT+ G E +G ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 71 YINSSGTSWGDEGYAIGLETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGFR 130
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q GQATD++I +E+ K +V+++AK+ G+T E+I D+ R
Sbjct: 131 ASLPHATIVLNQSKTGGRGQATDIQIMAQEVLLNKRTVVEIFAKNTGQTVEKIAKDMDRM 190
Query: 257 KYFSPSEAVEYGIIDKVLYTEKS 279
Y +P+EA EYG++D+VL + K
Sbjct: 191 FYLTPAEAKEYGLLDRVLESSKD 213
>gi|158335483|ref|YP_001516655.1| ATP-dependent Clp protease-like protein [Acaryochloris marina
MBIC11017]
gi|158305724|gb|ABW27341.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 228
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 137/201 (68%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ GG+ +G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 80 YINSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRA 139
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +TI++ Q +GQA+D++I +E+ KA ++ + K+ G+T E+I D+ R
Sbjct: 140 SLGHATIVLNQARSGAQGQASDIQIRAQEVLANKATMLDILQKNTGQTAEKISKDMDRMF 199
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y SP EA +YG+ID+VL ++K
Sbjct: 200 YLSPEEAKDYGLIDRVLASQK 220
>gi|425470395|ref|ZP_18849265.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
gi|389883996|emb|CCI35667.1| putative ATP-dependent Clp protease proteolytic subunit-like
[Microcystis aeruginosa PCC 9701]
Length = 228
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 138/202 (68%), Gaps = 11/202 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
A+ PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ++D EKPI+
Sbjct: 17 AYRTPPPDLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDPEKPIF 76
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +GYETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 77 FYINSTGTSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFR 136
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q +GQATD++I KE+ K ++++++K+ G+T E++ D+ R
Sbjct: 137 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVIANKQTMLEIFSKNTGQTTEKLAKDMDRT 196
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
Y +P +A +YG+ID VL + K
Sbjct: 197 FYLTPQQAKDYGLIDLVLESRK 218
>gi|126657895|ref|ZP_01729048.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620835|gb|EAZ91551.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 226
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LP +TI++ Q GQATD++I KE+ + K ++++ +++ G+TPE+I DI R
Sbjct: 136 SLPHATIVLNQNRSGARGQATDIQIRAKEVLHNKQTMLQILSQNTGQTPEKIAKDIDRTF 195
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y +P +A EYG+ID+VL + K
Sbjct: 196 YLTPEKAKEYGLIDRVLESTK 216
>gi|254409400|ref|ZP_05023181.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183397|gb|EDX78380.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 223
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVYLG+ VP VTELI+AE LYLQY++ +KPI +YINSTGT++ GE +G+ETEAFAI
Sbjct: 38 RIVYLGLPLVPQVTELIVAELLYLQYDNPDKPIKIYINSTGTSRYDGEPIGFETEAFAIC 97
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEI 222
D M Y++PPI T+C+G+A G AA+LL AG KG RA+LP+++I++ QP GQATD++I
Sbjct: 98 DTMNYIQPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIVLHQPKSYARGQATDIQI 157
Query: 223 ARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
KE+ K ++ + AK+ G++ E+I D+ R Y +P EA EYG+ID+VL +++ P
Sbjct: 158 RAKEVLANKITMMGILAKNTGQSAEKITKDMERMLYMTPYEAKEYGLIDRVLESDEVP 215
>gi|282896314|ref|ZP_06304336.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198810|gb|EFA73689.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 229
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 142/217 (65%), Gaps = 11/217 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + + S + PPPDLAS L K RIVYLG V VT+LI+A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYL++++ EKPI+ YINSTGT+ G+ +GYETEAFAI D + Y+K P+ T+C+G A G
Sbjct: 64 LLYLKFDNPEKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AAL+L G KG RA+LP +TI++ QP GQATD++I KE+ + KA ++ +++K+
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQPRSGTRGQATDIQIYAKEVLSNKAAILDIFSKNT 183
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
G+ PE+I D+ R Y +P A EYG+ID+VL + K
Sbjct: 184 GQQPEKISKDMERMFYLTPQAAKEYGLIDRVLESMKD 220
>gi|427714499|ref|YP_007063123.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378628|gb|AFY62580.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 219
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTEL++A+ L+LQY+D EKPI +YINSTGT++ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELLVAQLLFLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D + Y+KPP+ T+C+G A G AALLL AG KG RA+L +TI++ Q GQATD+
Sbjct: 91 ICDTINYIKPPVHTICLGQAMGMAALLLSAGTKGYRASLAHATIVMHQTKSYARGQATDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
+I +E+ K +V++ +++ G+TPE+I D+ R Y +P EA EYG+IDKVL E +
Sbjct: 151 QIRAREVLANKQTMVEILSRNTGQTPERITKDMDRLLYMTPDEAKEYGLIDKVLANETA 209
>gi|427418190|ref|ZP_18908373.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760903|gb|EKV01756.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 230
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 139/210 (66%), Gaps = 12/210 (5%)
Query: 82 PFTSG-TAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYE 130
P+ G A+ PPPDL S L K RIVYLG V S VT LI+A+ LYL+++
Sbjct: 11 PYYGGDAAFRTPPPDLQSLLLKERIVYLGTPLVSSDDYKRQMGMDVTRLIIAQLLYLEFD 70
Query: 131 DVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
D +KPIY YINSTGT+ G+ LG+ETEAFAI D M Y++PP+ T+C+G A G A+++L
Sbjct: 71 DPDKPIYFYINSTGTSWYTGDALGFETEAFAICDTMRYIRPPVHTICIGQAMGTASMILA 130
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG RA+LP++TI++ QP GQATD++I KE+ + + + + G+TPE++
Sbjct: 131 AGTKGFRASLPNATIVLNQPRTGARGQATDIQIRAKEVLANREATLDILSHSTGQTPEKL 190
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
+ D R Y +P+EA EYG+ID+VL + K
Sbjct: 191 QKDTDRMFYLTPAEAKEYGLIDRVLESTKD 220
>gi|172036825|ref|YP_001803326.1| ATP-dependent Clp protease-like protein [Cyanothece sp. ATCC 51142]
gi|354554634|ref|ZP_08973938.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698279|gb|ACB51260.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553443|gb|EHC22835.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 226
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 137/201 (68%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ EKPIY
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPIYF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LP +TI++ Q GQATD++I KE+ + K ++++ +++ G+T E+I DI R
Sbjct: 136 SLPHATIVLNQNRSGARGQATDIQIRAKEVLHNKQTMLQILSENTGQTVEKIAKDIDRTF 195
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y +P +A EYG+ID+VL + K
Sbjct: 196 YLTPEKAKEYGLIDRVLESTK 216
>gi|359457307|ref|ZP_09245870.1| ATP-dependent Clp protease-like protein [Acaryochloris sp. CCMEE
5410]
Length = 228
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 136/201 (67%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RIVYLGM S VTELI+A+ L+LQ++D +KPI+
Sbjct: 20 YRTPPPDLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFF 79
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ GG+ +G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AG KG RA
Sbjct: 80 YINSTGTSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRA 139
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +TI++ Q +GQA+D++I +E+ K ++ + K+ G+T E+I D+ R
Sbjct: 140 SLGHATIVLNQARSGAQGQASDIQIRAQEVLANKTTMLDILQKNTGQTAEKISKDMDRMF 199
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y SP EA +YG+ID+VL ++K
Sbjct: 200 YLSPEEAKDYGLIDRVLASQK 220
>gi|284929272|ref|YP_003421794.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
gi|284809716|gb|ADB95413.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
Length = 226
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 138/201 (68%), Gaps = 11/201 (5%)
Query: 89 WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYL 138
+ PPPDL S L K RI+YLG+ S VT+LI+A+ LYLQ+++ +KPI+
Sbjct: 16 FRTPPPDLESLLLKERIIYLGLPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDNPDKPIFF 75
Query: 139 YINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG RA
Sbjct: 76 YINSTGTSWHTGDAVGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRA 135
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LP +TI++ Q +GQATD++I KE+ + K+ ++++ +K+ G+ ++I DI R
Sbjct: 136 SLPHATIVLNQNRSGAQGQATDIQIRAKEVLSNKSTMLQILSKNTGQAVDKISKDIDRTF 195
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
Y +P +A EYG+ID+VL + K
Sbjct: 196 YLTPEKAKEYGLIDRVLESTK 216
>gi|119493581|ref|ZP_01624245.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452571|gb|EAW33754.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 220
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 138/211 (65%), Gaps = 11/211 (5%)
Query: 79 MVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQ 128
M P+ + + PPPDL S L K RIVYLG+ S VTELI+A+ LYLQ
Sbjct: 1 MQSPYYNDSPVRTPPPDLESLLLKERIVYLGLPLYSSDDIKRQVGIDVTELIIAQLLYLQ 60
Query: 129 YEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
++D +KPIY YINSTGT+ GG+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++
Sbjct: 61 FDDPDKPIYFYINSTGTSWYGGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAMI 120
Query: 188 LGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPE 247
L AG KG RA+LP +T+++ Q GQATD++I KE+ K +++ AK+ G++ E
Sbjct: 121 LSAGTKGYRASLPHATLILNQAKSGSRGQATDIQIRAKEVLANKQTFLEIMAKNTGQSTE 180
Query: 248 QIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+I D R Y +P A EYG+ID+VL + K
Sbjct: 181 RIAKDTDRMFYLTPEAAKEYGLIDRVLQSRK 211
>gi|428221048|ref|YP_007105218.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994388|gb|AFY73083.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 215
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVY+G+ V +VTELI AE LYLQYED +KPIY+YINSTGT + GE +GYETEAFA
Sbjct: 28 KERIVYIGLPLVAAVTELITAELLYLQYEDPDKPIYIYINSTGTGREDGEPVGYETEAFA 87
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D M Y+KPPI T+C+G A G AA+LL +G KG RA+LP+++I+++QP GQATD+
Sbjct: 88 IADTMRYIKPPIHTICIGTAIGAAAMLLSSGTKGLRASLPNASIVLRQPKSYARGQATDI 147
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
EI KE+ + ++ + +++ G+T E++ D+ R Y + EA +YG+IDKVL + K
Sbjct: 148 EIRAKEVMANRDTMIDVLSRNTGQTKEKLSKDMDRLFYMTAQEAKDYGLIDKVLESRKD 206
>gi|414079204|ref|YP_007000628.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972483|gb|AFW96571.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 220
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Query: 82 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYIN 141
P++ +++ PPPDL S L K RIVYLGM VPSVTELI+A+ LYLQ +D EKPI +YIN
Sbjct: 12 PYSGDSSYRTPPPDLPSLLLKERIVYLGMPLVPSVTELIVAQLLYLQSDDPEKPIKIYIN 71
Query: 142 STGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA++L AG KG RA+LP
Sbjct: 72 STGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMILSAGTKGCRASLP 131
Query: 201 SSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
+S+I++ QP +GQATD++I KE+ KA ++++ A+ + +I D+ R Y +
Sbjct: 132 NSSIILHQPKSYAQGQATDIQIRAKEVLANKASMLEILARTTEQDMTKISKDMDRLFYMT 191
Query: 261 PSEAVEYGIIDKVL 274
P +A EYG+ID+V
Sbjct: 192 PDQAKEYGLIDRVF 205
>gi|434402515|ref|YP_007145400.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256770|gb|AFZ22720.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 220
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+AE LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAELLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+CVG+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIFDTMKYIKPPIHTICVGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP+S+I++ QP +GQATD++I +E+ K +V + ++ G+ E+I D
Sbjct: 124 KGCRASLPNSSIILHQPKSYAQGQATDIQIRAREVLVNKGSIVDILSRTTGQATEKIIKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P +A EYG+ID+V E+
Sbjct: 184 MDRLLYMTPYQAKEYGLIDRVFEKEE 209
>gi|186681466|ref|YP_001864662.1| ATP-dependent Clp protease-like protein [Nostoc punctiforme PCC
73102]
gi|186463918|gb|ACC79719.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 220
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ +++ PPPDL S L K RIVY+GM VP+VTELI+AE L+LQ +D E
Sbjct: 4 SPIKAVQAPYYGDSSYRTPPPDLPSLLLKERIVYIGMPLVPAVTELIVAELLFLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+CVG+A G +A+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMRYIKPPIHTICVGSAMGMSAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP S+I++ QP +GQATD++I +E+ K LV + + G+ E+I D
Sbjct: 124 KGCRASLPHSSIILHQPKSYAQGQATDIQIRAREVLVNKGALVDILHQTTGQPREKITKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P EA EYG+ID+V E+
Sbjct: 184 MDRLLYLTPYEAKEYGLIDRVFEKEE 209
>gi|427707094|ref|YP_007049471.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
gi|427359599|gb|AFY42321.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7107]
Length = 220
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPVGFETEAFAIFDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP+++I++ QP +GQATD++I KE+ KA LV++ + G+T E+I D
Sbjct: 124 KGCRASLPNASIILHQPKSYAQGQATDIQIRAKEVLANKASLVEILTRTTGQTGEKITKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y + +A EYG+ID+V E+
Sbjct: 184 MDRLFYMNAYQAKEYGLIDRVFEKEE 209
>gi|282900570|ref|ZP_06308512.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194370|gb|EFA69325.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 229
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 11/217 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + + S + PPPDLAS L K RIVYLG V VT+LI+A+
Sbjct: 4 SPIKAVQTSYYSDNWYRTPPPDLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQ 63
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYL++++ +KPI+ YINSTGT+ G+ +GYETEAFAI D + Y+K P+ T+C+G A G
Sbjct: 64 LLYLKFDNPDKPIFFYINSTGTSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIG 123
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AAL+L G KG RA+LP +TI++ QP GQATD++I KE+ KA ++ +++K+
Sbjct: 124 TAALILSCGTKGFRASLPHATIVLNQPRSGTRGQATDIQIYAKEVLANKAAILDIFSKNT 183
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
G+ PE+I D+ R Y +P A EYG+ID+VL + K
Sbjct: 184 GQQPEKISKDMERMFYLTPQAAKEYGLIDRVLESMKD 220
>gi|449019594|dbj|BAM82996.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 288
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 127/183 (69%), Gaps = 2/183 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVY+GM V ELI+AE LYL Y D +KP+Y+YINSTGT G G+ET+AFA
Sbjct: 98 HNRIVYIGMPLTAPVCELIIAELLYLNYNDPDKPVYVYINSTGTMGLDGSTAGFETDAFA 157
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D M Y+KPP++T+CVG+A+G AA++L G KGNRAALP+++IM+ QP G GQA D+
Sbjct: 158 IIDTMNYIKPPVYTICVGSAFGLAAVILACGDKGNRAALPNASIMLHQPRGTARGQAADI 217
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS- 279
I +E+ + +++ A+H G+T E+ R KY +P EA E+GIIDK+L +EK
Sbjct: 218 AIKAREIMYNRKVAMEILAEHTGRTAEECLKASERTKYMTPQEAKEFGIIDKILRSEKDL 277
Query: 280 PED 282
P+D
Sbjct: 278 PKD 280
>gi|307152498|ref|YP_003887882.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982726|gb|ADN14607.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 222
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 139/202 (68%), Gaps = 11/202 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
++ PPPDL S L K RIVYLGM S VT+LI+A+ L+LQ++D +KPIY
Sbjct: 11 SFRTPPPDLESLLLKERIVYLGMPLFSSDDIKQQVGIDVTQLIIAQLLFLQFDDPDKPIY 70
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG R
Sbjct: 71 FYINSTGTSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCR 130
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q +GQATD++I KE+ K ++++++K+ G+ E++ D+ R
Sbjct: 131 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVLANKRTMLEIFSKNTGQAIEKLAKDLDRT 190
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
Y +P++A EYG+ID+VL + K
Sbjct: 191 FYLTPAQAKEYGLIDRVLESRK 212
>gi|352096271|ref|ZP_08957151.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676965|gb|EHA60116.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 225
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 135/198 (68%), Gaps = 11/198 (5%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ L+L++++ +KPIY YIN
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDTKRQLGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 81 STGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 140
Query: 201 SSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
++I++ QP GQATD++I KE+ + K ++++ + + G++ E++ AD R Y +
Sbjct: 141 HASIVLHQPRSGARGQATDIQIRAKEVLHNKRAMLEILSTNTGRSVEELSADSDRMSYLT 200
Query: 261 PSEAVEYGIIDKVLYTEK 278
P EAV YG+ID+VL + K
Sbjct: 201 PQEAVSYGLIDRVLDSRK 218
>gi|87125531|ref|ZP_01081376.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
gi|86166831|gb|EAQ68093.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
Length = 211
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 136/198 (68%), Gaps = 11/198 (5%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ LYL++++ +KPIY YIN
Sbjct: 4 PPPDLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPDKPIYFYIN 63
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ G+ +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 64 STGTSWYTGDAIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 123
Query: 201 SSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
++I++ QP GQATD++I KE+ + K ++++ +++ G++ EQ+ D R Y +
Sbjct: 124 HASIVLHQPRSGARGQATDIQIRAKEVLHNKRAMLEILSENTGRSVEQLAKDSDRMSYLT 183
Query: 261 PSEAVEYGIIDKVLYTEK 278
P +AVEYG+ID+VL + K
Sbjct: 184 PEQAVEYGLIDRVLGSRK 201
>gi|428207692|ref|YP_007092045.1| endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
gi|428009613|gb|AFY88176.1| Endopeptidase Clp [Chroococcidiopsis thermalis PCC 7203]
Length = 219
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE LYLQ +D +KPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQSDDPDKPIKIYINSTGTSSYNGEPIGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
IYD + Y+KPP+ T+C+G+A G AA+LL AG G RA+LP++ I++ QP +GQATD+
Sbjct: 91 IYDTLRYIKPPVHTICIGSAMGMAAMLLSAGTPGCRASLPNANIILHQPKSYAQGQATDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+I KE+ KA L+ + AK G+ E+I D+ R Y +P +A EYG+ID+VL
Sbjct: 151 QIRAKEVLANKATLLDILAKTTGQPIEKIGKDMDRLFYLTPQQAKEYGLIDRVL 204
>gi|254421954|ref|ZP_05035672.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196189443|gb|EDX84407.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 230
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 142/209 (67%), Gaps = 12/209 (5%)
Query: 82 PFTSGTA-WEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYE 130
P+ G+A + PPPDL S L K RIVYLG V S VT+LI+A+ LYL+++
Sbjct: 11 PYGGGSAAYRTPPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFD 70
Query: 131 DVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
D EKPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L
Sbjct: 71 DPEKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILS 130
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
+GAKG+RA+LP +TI++ Q +GQATD++I +E+ KA + + + + G++ E++
Sbjct: 131 SGAKGSRASLPHATIVLNQTRSGAQGQATDIQIRAEEVLANKAAQLDILSANTGQSTEKL 190
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ D R Y +P EA +YG+ID+VL + K
Sbjct: 191 DKDTDRMFYLTPEEAKDYGLIDRVLSSTK 219
>gi|113954996|ref|YP_729944.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9311]
gi|113882347|gb|ABI47305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 225
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 135/198 (68%), Gaps = 11/198 (5%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYIN 141
PPPDL S + K RIVYLG+ VTELI+A+ L+L++++ +KPIY YIN
Sbjct: 21 PPPDLPSLMLKERIVYLGLPLFSDGDAKRQMGLDVTELIIAQLLFLEFDNPDKPIYFYIN 80
Query: 142 STGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
STGT+ GE +G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP
Sbjct: 81 STGTSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALP 140
Query: 201 SSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
++I++ QP GQATD++I KE+ + K ++++ + + G++ E++ AD R Y +
Sbjct: 141 HASIVLHQPRSGARGQATDIQIRAKEVLHNKRAMLEILSTNTGRSVEELSADSDRMSYLT 200
Query: 261 PSEAVEYGIIDKVLYTEK 278
P EAV YG+ID+VL + K
Sbjct: 201 PQEAVTYGLIDRVLDSRK 218
>gi|16331161|ref|NP_441889.1| ATP-dependent Clp protease-like-protein [Synechocystis sp. PCC
6803]
gi|383322903|ref|YP_005383756.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326072|ref|YP_005386925.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491956|ref|YP_005409632.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437224|ref|YP_005651948.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815317|ref|YP_007451769.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|18202351|sp|P74466.1|CLPR_SYNY3 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1653655|dbj|BAA18567.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274256|dbj|BAK50743.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272222|dbj|BAL29741.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275392|dbj|BAL32910.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278562|dbj|BAL36079.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961462|dbj|BAM54702.1| ATP-dependent Clp protease-like-protein [Bacillus subtilis
BEST7613]
gi|451781286|gb|AGF52255.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 225
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 138/198 (69%), Gaps = 11/198 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
A++ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY
Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIY 74
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG R
Sbjct: 75 FYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYR 134
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q +GQATD++I KE+ + K ++++ + + G+T E++ D+ R
Sbjct: 135 ASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRT 194
Query: 257 KYFSPSEAVEYGIIDKVL 274
Y +P++A EYG+ID+VL
Sbjct: 195 FYLTPAQAKEYGLIDRVL 212
>gi|427721126|ref|YP_007069120.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
gi|427353562|gb|AFY36286.1| ATP-dependent Clp protease proteolytic subunit [Calothrix sp. PCC
7507]
Length = 220
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ ++ PPPDL S L K RIVYLGM V +VTELI+AE L+LQ +D +
Sbjct: 4 SPIKAVQAPYYGDNSYRTPPPDLPSLLLKERIVYLGMPLVAAVTELIVAELLFLQSDDPD 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAI+D M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIFDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G RA+LP ++I++ QP +GQATD++I +E+ KA +V + ++ G+ PE++ D
Sbjct: 124 PGCRASLPHASIILHQPKSYAQGQATDIQIRAREVLANKASMVNILSRTTGQLPEKVAKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P EA EYG+ID+V E+
Sbjct: 184 MDRLLYMTPYEAKEYGLIDRVFEKEE 209
>gi|440684796|ref|YP_007159591.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
gi|428681915|gb|AFZ60681.1| ATP-dependent Clp protease proteolytic subunit [Anabaena cylindrica
PCC 7122]
Length = 220
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 142/206 (68%), Gaps = 1/206 (0%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLGM VP+VTELI+A+ LYLQ +D E
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGMPLVPAVTELIVAQLLYLQSDDPE 63
Query: 134 KPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI +YINSTGT+ GE +G+ETEAFAIYD M Y+KPPI T+C+G+A G AA+LL AG
Sbjct: 64 KPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGT 123
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP+S I++ QP +GQATD++I KE+ KA ++ + + G+ +I D
Sbjct: 124 KGCRASLPNSNIILHQPKSYAQGQATDIQIRAKEVLANKASMLDILSHTTGQEVAKISKD 183
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ R Y +P +A EYG+ID+V E+
Sbjct: 184 MDRLFYMTPYQAKEYGLIDRVFEKEE 209
>gi|428317796|ref|YP_007115678.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241476|gb|AFZ07262.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 219
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE L+LQYED +KPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTSGYSGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D + Y+KPP+ T+C+G+A G +A+LL AG KG RA+LP ++I++ QP GQA+D+
Sbjct: 91 ICDTIKYIKPPVHTICLGSAMGMSAMLLAAGTKGFRASLPHASIVLHQPKAYTRGQASDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+I KE+ KA +++++A G+ E+I D+ R Y +P EA EYG+ID+VL
Sbjct: 151 QIRAKEVLANKATMLEIFASCTGQPIEKITKDMDRLLYMTPHEAKEYGLIDRVL 204
>gi|334118045|ref|ZP_08492135.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460030|gb|EGK88640.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 219
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
K RIVYLGM VP+VTELI+AE L+LQYED +KPI +YINSTGT+ GE +G+ETEAFA
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYEDPDKPIKIYINSTGTSGYSGEPVGFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D + Y+KPP+ T+C+G+A G +A+LL AG KG RA+LP ++I++ QP GQA+D+
Sbjct: 91 ICDTIRYIKPPVHTICLGSAMGMSAMLLAAGTKGFRASLPHASIVLHQPKAYTRGQASDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+I KE+ KA +++++A G+ E+I D+ R Y +P EA EYG+ID+VL
Sbjct: 151 QIRAKEVLANKATMLEIFASCTGQPIEKITKDMDRLLYLTPQEAKEYGLIDRVL 204
>gi|224009932|ref|XP_002293924.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220970596|gb|EED88933.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 225
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 125/177 (70%), Gaps = 1/177 (0%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
NRIVY+GM VP+VTEL++AE LYL YED KP+ +YINS+GTT G+ +G+ETEAFAI
Sbjct: 36 NRIVYIGMPLVPAVTELVIAELLYLNYEDQSKPVTMYINSSGTTTANGQAVGFETEAFAI 95
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
DVM Y++PP+ T+ +G A+G AA++L G KG RAALP++TI + QP + GQA+D+
Sbjct: 96 ADVMKYIRPPVNTVAIGQAFGAAAMILSQGRKGGRAALPNATIRLNQPRSQARGQASDIA 155
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
I +E+ + + L A+ GK + D +R KY P EAVEYG+IDKV+ +E+
Sbjct: 156 IKAREVAHNRKTTCDLIAQATGKPLSVVMNDCQRVKYLQPDEAVEYGLIDKVIRSEE 212
>gi|332706286|ref|ZP_08426353.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
gi|332354934|gb|EGJ34407.1| protease subunit of ATP-dependent Clp protease [Moorea producens
3L]
Length = 281
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVYLGM V +VTELI+AE LYLQY+D +KPI +YINSTGT++ G+ +G+ETEAFAI
Sbjct: 96 RIVYLGMPLVSAVTELIIAELLYLQYDDPDKPIKIYINSTGTSRYDGQPVGFETEAFAIC 155
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEI 222
D + Y+KPPI T+C+G+A G AA+LL AG KG RA+LP++TI++ QP +GQATD++I
Sbjct: 156 DTINYIKPPIHTICIGSALGMAAMLLSAGTKGCRASLPNATIVLHQPRSYAQGQATDIQI 215
Query: 223 ARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+E+ K ++ + +++ G+ E+I D+ R Y +P +A EYG+ID+VL
Sbjct: 216 RAQEVLTNKKTMLDILSRNSGQDQEKIAKDMDRFLYMTPHQAQEYGLIDRVL 267
>gi|434399880|ref|YP_007133884.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270977|gb|AFZ36918.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 228
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 11/217 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RI+YLG+ V VTELI+A+
Sbjct: 3 SPIQAVQAPYRGDAYYRTPPPDLPSLLLKERIIYLGLPLVSPDEYKDQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
L+LQ++D +KPIY+YINSTGT+ GGE +G+ETEAFAI D M Y+KPP+ T+C+G A G
Sbjct: 63 LLFLQFDDPDKPIYMYINSTGTSWYGGESIGFETEAFAICDTMNYIKPPVHTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AA++L +G KG RA+LP +TI++ Q +GQATD++I KE+ + K +++L+AK+
Sbjct: 123 TAAMILASGTKGCRASLPHATIILHQARQGAQGQATDIQIRAKEVLHNKHMMMELFAKNT 182
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
G+T E++ D R Y +P EA YGIIDKVL + K
Sbjct: 183 GQTVEKVTKDTDRMFYMTPEEAKNYGIIDKVLESSKQ 219
>gi|298713496|emb|CBJ27051.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 323
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFA 160
NRIVYLGM VP+VTELI+AE LYL YE KP+Y+YIN+ GT T G +G+ETEAFA
Sbjct: 119 HNRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTSTPDGRAIGFETEAFA 178
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D M Y+KPP++T+ VG A+G A+LL +G KG+R+ALP+++IM+ QP GQA+D+
Sbjct: 179 ISDCMNYIKPPVYTIGVGQAFGLGAMLLASGEKGHRSALPNASIMLHQPRSMARGQASDI 238
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
I KE+ + ++ ++ GK +++ D R Y SP +AVEYG+IDKVL + K
Sbjct: 239 AIKAKEVMANRKTATQMLSEACGKPYDEVLEDSSRTFYMSPDDAVEYGLIDKVLRSSK 296
>gi|428215429|ref|YP_007088573.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
gi|428003810|gb|AFY84653.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
Length = 217
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFA 160
K RIVYLGM VP VTELI+++ LYLQY+D EKPI +YINSTGT+ + G+ + +ETEAFA
Sbjct: 31 KERIVYLGMPLVPKVTELIISQLLYLQYDDPEKPINIYINSTGTSNESGQPVAFETEAFA 90
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I D + Y+KPP+ T+C+G A G +A+LL AG KG R +LP++TI++ QP GQA+D+
Sbjct: 91 ICDTIKYIKPPVNTICIGMAVGMSAMLLSAGTKGCRTSLPNATIVLHQPKSYTRGQASDI 150
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+I KE+ + ++ + A++ G+TPE+I D+ R Y SP EAV+Y +ID+VL
Sbjct: 151 QIRAKEVLANRKTMIDILAENTGQTPEKIIKDMDRVFYLSPEEAVKYNLIDRVL 204
>gi|428776589|ref|YP_007168376.1| endopeptidase Clp [Halothece sp. PCC 7418]
gi|428690868|gb|AFZ44162.1| Endopeptidase Clp [Halothece sp. PCC 7418]
Length = 228
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 148/226 (65%), Gaps = 12/226 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ G PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIEAVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQLGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ+ED EKPIY+YINSTGT+ GGE +G+ETEAFAI D + Y+ PP+ T+C+G A G
Sbjct: 63 LLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTINYIAPPVNTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AA++L +G KG RA+LP +TI++ QP +GQATD++I KE+ K ++++ +K+
Sbjct: 123 TAAMILSSGTKGYRASLPHATIILNQPRQGAQGQATDIQIRAKEVLANKQAMLEILSKNT 182
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS-PEDHGVVS 287
G+ E+I D R Y SP EA EYG+ID+VL + K P GV+S
Sbjct: 183 GQPAEKIAKDSDRMFYLSPQEAKEYGLIDRVLESTKELPSTAGVLS 228
>gi|428778680|ref|YP_007170466.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692959|gb|AFZ49109.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 228
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 149/226 (65%), Gaps = 12/226 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ G PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIRGVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ+ED EKPIY+YINSTGT+ GGE +G+ETEAFAI D + Y++PP+ T+C+G A G
Sbjct: 63 LLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTLNYIEPPVNTICIGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AA++L +G KG RA+LP++TI++ QP +GQATD++I KE+ K ++ + +++
Sbjct: 123 TAAMILSSGTKGYRASLPNATIILNQPRQGAQGQATDIQIRAKEVLENKQSMLSILSRNT 182
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS-PEDHGVVS 287
G+ E+I D R Y SP EA EYG+ID+VL + K P GV+S
Sbjct: 183 GQPVEKIAKDSDRMFYLSPQEAKEYGLIDRVLESTKELPSTAGVLS 228
>gi|113475005|ref|YP_721066.1| ATP-dependent Clp protease-like protein [Trichodesmium erythraeum
IMS101]
gi|110166053|gb|ABG50593.1| Endopeptidase Clp [Trichodesmium erythraeum IMS101]
Length = 229
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 132/202 (65%), Gaps = 11/202 (5%)
Query: 88 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIY 137
++ PPPDL S + K RIVYLG+ S VT+LI+A+ LYLQ+++ EKPIY
Sbjct: 18 SFRTPPPDLESLMLKERIVYLGLPLFSSDEVKRNVGIDVTQLIIAQLLYLQFDNPEKPIY 77
Query: 138 LYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YINSTGT+ G+ +G+ETEAFAI D M YVKPPI T+C+G A G AA++L AG KG R
Sbjct: 78 FYINSTGTSWYTGDAIGFETEAFAICDTMSYVKPPIHTICIGQAMGTAAMILSAGTKGYR 137
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
A+LP +TI++ Q GQATD+ I KE+ K + + +K+ G++ E+I D R
Sbjct: 138 ASLPHATIVLNQAKTGARGQATDISIRAKEVLVNKTTFLDILSKNTGQSVEKIAKDTDRM 197
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
Y +P A EYG+ID+VL + K
Sbjct: 198 LYMTPEIAKEYGLIDQVLASRK 219
>gi|443324641|ref|ZP_21053380.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795740|gb|ELS05088.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 224
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 130/189 (68%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ L+LQ++D EKPIY+YINSTGT+ GG+
Sbjct: 27 KERIVYLGLPLVSPDEYKDQIGVDVTELIVAQLLFLQFDDPEKPIYMYINSTGTSWYGGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D M Y+KPP+ T+C+G A G AA++L AGAKG RA+LP +TI++ Q
Sbjct: 87 SIGFETEAFAICDTMNYIKPPVHTICIGQAMGTAAMILSAGAKGCRASLPHATIILHQAR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ K ++ ++AK+ G+ E++ D R Y +P +A EYG+I
Sbjct: 147 QGAQGQATDIQIRAKEVLENKKAVLDIFAKNTGQPQEKLAKDTDRMLYMTPQDAKEYGLI 206
Query: 271 DKVLYTEKS 279
DKVL + K
Sbjct: 207 DKVLESTKD 215
>gi|443323687|ref|ZP_21052691.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786669|gb|ELR96398.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 229
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 132/189 (69%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ + VTELI+A+ LYLQ++D +KPIY+YINSTGT+ GGE
Sbjct: 32 KERIVYLGLPLISPDEYKDQIGIDVTELIVAQLLYLQFDDPDKPIYMYINSTGTSWYGGE 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAIYD + Y+KPP+ T+C+G A G AA++L AGAKG RA+LP +TI++ Q
Sbjct: 92 AIGFETEAFAIYDTLKYIKPPVHTICIGQAMGTAAMILAAGAKGCRASLPHATIILHQAR 151
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + ++++ A + ++ E+I+ D R Y +P +A+EYG+I
Sbjct: 152 QGTQGQATDIQIRAKEVLANRRMMLEMLADNTTQSVEKIQQDTDRMYYMNPQQALEYGLI 211
Query: 271 DKVLYTEKS 279
DK+L + K
Sbjct: 212 DKILTSRKD 220
>gi|219113429|ref|XP_002186298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583148|gb|ACI65768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFA 160
NRIVY+GM VP+VTEL++AE LYL YE +PI +YINS+GT T G+ +G+ETEAFA
Sbjct: 11 HNRIVYIGMPLVPAVTELVIAELLYLNYESTTEPITMYINSSGTSTANGQAVGFETEAFA 70
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I DVM YV+PP+ T+ +G A+G AA+LL G +G+R ALP++TI++ QP + GQA+D+
Sbjct: 71 IADVMKYVRPPVHTVALGQAFGAAAMLLSQGKRGSRFALPNATILLNQPKSQARGQASDI 130
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTE 277
I +E+ + + +L A GK E + D R KY P EAVEYG+ID V+ E
Sbjct: 131 AIKAREVAHNRRTTCELIASACGKPVETVMEDCSRVKYLQPHEAVEYGLIDAVVENE 187
>gi|422295344|gb|EKU22643.1| atp-dependent clp protease proteolytic subunit [Nannochloropsis
gaditana CCMP526]
Length = 310
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
NRIVYLGM+ VP+VTELI+AE LYL YE ++PIY+YINS G + G +G++TEAFA
Sbjct: 88 HNRIVYLGMALVPAVTELIIAELLYLNYESQDRPIYMYINSPGISAPDGRAMGFDTEAFA 147
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
I DVM Y++ PI T+CVG +G AA+LL G KG R +LP+ +IM+ QP GQA+D+
Sbjct: 148 IADVMSYIRAPIATVCVGQCFGSAAMLLACGTKGQRYSLPNGSIMLHQPRSLSRGQASDI 207
Query: 221 EI-ARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
I AR+ M+N + ++ AK GK + I D R +YFSP EAVEYG+ID+VL
Sbjct: 208 AIKAREVMRNRRIN-SEMLAKACGKPLDVIIKDASRKRYFSPEEAVEYGLIDQVL 261
>gi|33862588|ref|NP_894148.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|124023702|ref|YP_001018009.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|33634504|emb|CAE20490.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|123963988|gb|ABM78744.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 223
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 130/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ QP
Sbjct: 87 AVGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGHRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + K ++K+ A + G++ EQ+ D R Y +P +AVEYGII
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLKILASNTGRSIEQLSKDSDRMSYLTPGDAVEYGII 206
Query: 271 DKVLYTEK 278
D++L + K
Sbjct: 207 DRILSSRK 214
>gi|159470091|ref|XP_001693193.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158277451|gb|EDP03219.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 276
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 136/208 (65%), Gaps = 9/208 (4%)
Query: 89 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++ PI+ YINSTG
Sbjct: 36 WKEAGPPPDLATRLFSERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 94
Query: 147 KGGEKLGYETEAFAIYDVMGYVKP--PIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
K K G E EA A+Y +M V+ PI+TLCVGNA+GEAALLL AG+ G RAAL SSTI
Sbjct: 95 KSTTKFGNEHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTI 154
Query: 205 MIKQPIGRIEG-QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSE 263
M++QP+ R+ G QA+D++I RK + A + K A KT EQI D RP+YF+P E
Sbjct: 155 MLRQPLQRLGGMQASDIDIYRKITREKTATMAKYLAACTKKTEEQIMTDFTRPRYFNPYE 214
Query: 264 AVEYGIIDKVLYTEKSPEDHGVVSDLKK 291
AV YG+ID VL + E+ V D +K
Sbjct: 215 AVSYGLIDTVL---EPKEERAVFKDWEK 239
>gi|126696837|ref|YP_001091723.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126543880|gb|ABO18122.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 220
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG+RAALP ++I++ QPI
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ K ++++ +++ GKT E++ D R Y +P EA++YG+I
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 271 DKVLYTEK 278
D++L ++K
Sbjct: 207 DRILTSQK 214
>gi|56751581|ref|YP_172282.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 6301]
gi|81301347|ref|YP_401555.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 7942]
gi|18203214|sp|Q9L4P4.1|CLPR_SYNE7 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|7264063|emb|CAB81780.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686540|dbj|BAD79762.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170228|gb|ABB58568.1| Endopeptidase Clp [Synechococcus elongatus PCC 7942]
Length = 228
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 131/189 (69%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+GYETEAFAI D M Y+KPP+ T+C+G A G AA++L G GNRA+LP +TI++ QP
Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPR 150
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQA+D++I KE+ K +++++A++ G+ P+++ D R Y +P++AVEYG+I
Sbjct: 151 TGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210
Query: 271 DKVLYTEKS 279
D+VL + K
Sbjct: 211 DRVLDSRKD 219
>gi|78779794|ref|YP_397906.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|123969044|ref|YP_001009902.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. AS9601]
gi|78713293|gb|ABB50470.1| Endopeptidase Clp [Prochlorococcus marinus str. MIT 9312]
gi|123199154|gb|ABM70795.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
Length = 220
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 130/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RAALP ++I++ QPI
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPI 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ K ++++ +++ GKT E++ D R Y +P EA++YG+I
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 271 DKVLYTEK 278
D++L ++K
Sbjct: 207 DRILTSQK 214
>gi|157413875|ref|YP_001484741.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|254526964|ref|ZP_05139016.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|157388450|gb|ABV51155.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538388|gb|EEE40841.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 220
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 130/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++ED EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RAALP ++I++ QPI
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPI 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ K ++++ +++ GKT +++ D R Y +P EA++YG+I
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIDELSKDSDRMSYLNPQEALDYGVI 206
Query: 271 DKVLYTEK 278
D++L ++K
Sbjct: 207 DRILTSQK 214
>gi|33240836|ref|NP_875778.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 221
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 129/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWHTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L G+KG+RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTISYIKPPIHTICIGQAMGTAAVILSGGSKGHRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I KE+ + K ++++ +K+ GK+ Q+ D R Y +P EAVEYG+I
Sbjct: 147 SGASGQATDIQIRAKEVIHNKQAMLEILSKNTGKSVSQLSKDSDRMSYLNPHEAVEYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLTSRK 214
>gi|78212385|ref|YP_381164.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9605]
gi|78196844|gb|ABB34609.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 225
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 129/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ GE
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGE 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP+S+I++ QP
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPNSSIVLHQPR 149
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I KE+ + K ++++ + + G++ E++ D R Y +P +AVEYG+I
Sbjct: 150 SGARGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPQQAVEYGLI 209
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 210 DRVLSSRK 217
>gi|354567564|ref|ZP_08986733.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542836|gb|EHC12297.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 225
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ + P+ + PPPDL S L K RIVYLG VT+LI+AE LYLQ ED +
Sbjct: 4 SPIKAVQAPYYGDNFYRTPPPDLPSLLLKERIVYLGTPLFAEVTKLIIAELLYLQSEDPD 63
Query: 134 KPIYLYINSTGTTKGGEK-----LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
KPI +YINSTGT+ G G+ETEAFAIYD M Y+KPPI T+C+G A G AA+LL
Sbjct: 64 KPIKIYINSTGTSDGSSGQMARLFGFETEAFAIYDTMKYIKPPIHTICIGKAVGMAAVLL 123
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG RA+L S+I++ QP +GQATD++I KE+ K +V + +++ G+ E+
Sbjct: 124 SAGTKGCRASLAHSSIVLHQPRSYAQGQATDIQIQAKEVITNKEAMVDILSRNTGQPKEK 183
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
I D+ R Y +P +AVEYG+ID+V EKS
Sbjct: 184 IVKDMDRHFYMTPQQAVEYGLIDRVF--EKS 212
>gi|116072310|ref|ZP_01469577.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064832|gb|EAU70591.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 222
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 129/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L+++D EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + K ++++ + + G+T E++ + R Y +P EAVE+G+I
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLSSRK 214
>gi|443315110|ref|ZP_21044620.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785292|gb|ELR95122.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 230
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 129/190 (67%), Gaps = 12/190 (6%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG+ V + VT+LI+A+ L+LQ++D +KPIY YINSTGT+ G+
Sbjct: 32 KERIIYLGLPLVSADEYKRQLGVDVTKLIIAQLLFLQFDDPDKPIYFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP- 209
+G ETEAFAI D MGYVKPPI T+C+G A G AA++L +G KG RA+LP +TI++ Q
Sbjct: 92 AIGQETEAFAICDTMGYVKPPIHTICIGQAMGTAAMILASGTKGFRASLPHATIVLNQAR 151
Query: 210 IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
+G QATD++I KE+ KA ++ + AK+ GKTP QI D R Y +P EA EYG+
Sbjct: 152 VGMGRSQATDIQIRAKEVLENKAAMLDILAKNTGKTPAQIAKDTDRMFYLTPPEAKEYGL 211
Query: 270 IDKVLYTEKS 279
ID+VL + K
Sbjct: 212 IDRVLESTKD 221
>gi|78185115|ref|YP_377550.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9902]
gi|78169409|gb|ABB26506.1| Endopeptidase Clp [Synechococcus sp. CC9902]
Length = 223
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 129/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L+++D EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + K ++++ + + G+T E++ + R Y +P EAVE+G+I
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLSSRK 214
>gi|159903902|ref|YP_001551246.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159889078|gb|ABX09292.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KP+Y YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIVAQLLYLEFDNPDKPVYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 87 AIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + K ++++ +K+ G++ E++ D R Y +P++AVEYG+I
Sbjct: 147 SGAQGQATDIQIRAKEVIHNKQSMLEILSKNTGRSVEELSKDSDRMSYLNPNQAVEYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLKSRK 214
>gi|33861869|ref|NP_893430.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640237|emb|CAE19772.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 220
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 131/189 (69%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L +G KG+RAALP ++I++ QPI
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ K ++++ +++ GK+ E++ D R Y +P EA++YG+I
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKSIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 271 DKVLYTEKS 279
D++L ++K
Sbjct: 207 DRILTSQKD 215
>gi|33866182|ref|NP_897741.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 8102]
gi|33639157|emb|CAE08163.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
WH 8102]
Length = 222
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 130/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I KE+ + K ++++ + + G++ E++ D R Y +P++AVEYG+I
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPAQAVEYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLSSRK 214
>gi|170077810|ref|YP_001734448.1| ATP-dependent Clp protease-like protein [Synechococcus sp. PCC
7002]
gi|169885479|gb|ACA99192.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 228
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 130/189 (68%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ L+LQ++D +KPIY+YINSTGT+ GG+
Sbjct: 32 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIYMYINSTGTSWYGGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+ PP+ T+C+G A G AA++L AG KG RA+LP STI++ Q
Sbjct: 92 SIGFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQAR 151
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQA+D++I KE+ K ++++ +K+ G+ E++E D R Y +P +A+EYGII
Sbjct: 152 QGAQGQASDIQIRAKEVIENKRTILQMMSKYTGQPLEKLEKDTDRMFYMTPQQALEYGII 211
Query: 271 DKVLYTEKS 279
DKVL + K
Sbjct: 212 DKVLESSKD 220
>gi|297849204|ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
gi|297338325|gb|EFH68742.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 126/187 (67%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KGNR +P + MI+QP
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQPR 237
Query: 211 GRIEG--QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYG 268
G A+DV I KE+ + LV+L AKH G + E + +RRP Y +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLAKHTGNSVETVANVMRRPYYMDAPKAKEFG 297
Query: 269 IIDKVLY 275
+IDK+L+
Sbjct: 298 VIDKILW 304
>gi|427724370|ref|YP_007071647.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
gi|427356090|gb|AFY38813.1| ATP-dependent Clp protease proteolytic subunit [Leptolyngbya sp.
PCC 7376]
Length = 230
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 131/189 (69%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ L+LQ++D +KPI++YINSTGT+ GG+
Sbjct: 33 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIFMYINSTGTSWYGGD 92
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+ PP+ T+C+G A G AA++L AG KG RA+LP STI++ Q
Sbjct: 93 SIGFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQAR 152
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQA+D++I KE+ + K ++ + +K+ G+T +++E D R Y +P +A+EYGII
Sbjct: 153 QGAQGQASDIQIRAKEVIDNKRTIMDMMSKYTGQTIDKLEKDTDRMFYMTPEQALEYGII 212
Query: 271 DKVLYTEKS 279
DKVL + +
Sbjct: 213 DKVLESSQD 221
>gi|123966707|ref|YP_001011788.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123201073|gb|ABM72681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 220
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 130/189 (68%), Gaps = 11/189 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPPI T+C+G A G AA++L +G KG+RAALP ++I++ QPI
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ K ++++ +++ GK+ E + D R Y +P EA++YG+I
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKSIEDLSKDSDRMSYLNPQEALDYGVI 206
Query: 271 DKVLYTEKS 279
D++L ++K
Sbjct: 207 DRILTSQKD 215
>gi|260434315|ref|ZP_05788285.1| Clp protease [Synechococcus sp. WH 8109]
gi|260412189|gb|EEX05485.1| Clp protease [Synechococcus sp. WH 8109]
Length = 225
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 127/188 (67%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPIY YINSTGT+ G+
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 149
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I KE+ + K ++++ + + G++ E + D R Y +P +AVEYG+I
Sbjct: 150 SGARGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEDLSNDSDRMSYLTPQQAVEYGLI 209
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 210 DRVLSSRK 217
>gi|88809169|ref|ZP_01124678.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787111|gb|EAR18269.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 223
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 127/188 (67%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL+++D +KPIY YINSTGTT G+
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDDPDKPIYFYINSTGTTWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP S+I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I KE+ + K ++++ A + G++ E++ D R Y +P +A +YG+I
Sbjct: 147 SGARGQATDIQIRAKEVLHNKRAMLEILAANTGRSVEELSKDSDRMSYLTPDQAKDYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLTSRK 214
>gi|148241695|ref|YP_001226852.1| ATP-dependent Clp protease-like protein [Synechococcus sp. RCC307]
gi|147850005|emb|CAK27499.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 224
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KPI+ YINSTGT+ G+
Sbjct: 31 KERIVYLGLPLFSDDDAKRQMGVDVTELIIAQLLYLEFDNPDKPIFFYINSTGTSWYSGD 90
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AGAKG RA+LP+++I++ QP
Sbjct: 91 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGQRASLPNASIVLHQPR 150
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ + K ++ + +++ G+T EQ+ AD R Y +P +A++YG+I
Sbjct: 151 SGARGQATDIQIRAQEVLHNKRTMLSMLSENTGRTVEQLTADSDRMTYLTPDQAMDYGLI 210
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 211 DRVLSSRK 218
>gi|72382718|ref|YP_292073.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL2A]
gi|72002568|gb|AAZ58370.1| endopeptidase Clp [Prochlorococcus marinus str. NATL2A]
Length = 224
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 131/197 (66%), Gaps = 11/197 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I E+ + K ++++ + + G++ +Q+ D R Y +P EAV+YGII
Sbjct: 147 SGAQGQATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 271 DKVLYTEKSPEDHGVVS 287
D+VL + K V+S
Sbjct: 207 DRVLTSRKDLPSEKVLS 223
>gi|124026439|ref|YP_001015554.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL1A]
gi|123961507|gb|ABM76290.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 224
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ L+L++++ EKPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQATD++I E+ + K ++++ + + G++ +Q+ D R Y +P EAV+YGII
Sbjct: 147 SGAQGQATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLTSRK 214
>gi|318040431|ref|ZP_07972387.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0101]
Length = 233
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 130/190 (68%), Gaps = 11/190 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQA+D++I KE+ + K ++++ + + G++ EQ+ D R Y + +AVEYG+I
Sbjct: 147 SGARGQASDIQIRAKEVLHNKQTMLEMLSANTGRSVEQLSKDSDRMTYLTAHQAVEYGLI 206
Query: 271 DKVLYTEKSP 280
D+VL ++K P
Sbjct: 207 DRVLTSQKLP 216
>gi|298491709|ref|YP_003721886.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233627|gb|ADI64763.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 229
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLGM V + VT+LI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 32 KERIVYLGMPLVSADEYKRQIGVDVTKLIIAQLLYLKFDNPEKPIFFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+GYETEAFAI D + Y+K P+ T+C+G A G AAL+L AG KG RA+LP +TI++ QP
Sbjct: 92 SIGYETEAFAICDTIDYIKTPVHTICIGQAIGTAALILSAGTKGFRASLPHATIVLNQPR 151
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I KE+ KA ++ +++K+ G+TP +I D R Y +P EA EYG+I
Sbjct: 152 SGTRGQATDIQIYAKEVLANKAAILDIFSKNTGQTPAKIAKDTERMFYLTPQEAKEYGLI 211
Query: 271 DKVLYTEK 278
D VL + K
Sbjct: 212 DIVLASMK 219
>gi|428771385|ref|YP_007163175.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
gi|428685664|gb|AFZ55131.1| ATP-dependent Clp protease proteolytic subunit [Cyanobacterium
aponinum PCC 10605]
Length = 227
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 141/217 (64%), Gaps = 11/217 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIQAVSAPYRGDAYYRTPPPDLPSLLLKERIVYLGLPLVSPDEYKDQLGVDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
LYLQ++D EKPIYLYINSTGT+ GG+ +G+ETEAFAI D + Y+KPP+ T+C+G A G
Sbjct: 63 LLYLQFDDPEKPIYLYINSTGTSWYGGDSIGFETEAFAICDTINYIKPPVHTICLGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AA++L +G KG RA+LP +TI++ Q +GQATD++I +E+ K ++ + +
Sbjct: 123 TAAMILASGTKGCRASLPHATIILHQARQGAQGQATDIQIRAREVIVNKRVMLDILSAKT 182
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
G+ E+IE D R Y +P +A EYGIIDK+L + K
Sbjct: 183 GQPKEKIEKDTDRMFYMNPQQAKEYGIIDKILESTKQ 219
>gi|302837484|ref|XP_002950301.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
gi|300264306|gb|EFJ48502.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
Length = 298
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 9/208 (4%)
Query: 89 WEQ--PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
W++ PPPDLA+ L+ RI+YLGM SV EL+ A+ L++ ++ PI+ YINSTG
Sbjct: 58 WKEAGPPPDLATRLFTERIMYLGMPIDSSVAELLTAQ-LFVLVQEAPDPIFFYINSTGIA 116
Query: 147 KGGEKLGYETEAFAIYDVMGYVKP--PIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
K K G E EA A+Y +M V+ PI+TLCVGNA+GEAALLL AG G RAAL SSTI
Sbjct: 117 KSTTKFGNEHEAVAVYHMMKGVQKFCPIYTLCVGNAFGEAALLLSAGTPGKRAALRSSTI 176
Query: 205 MIKQPIGRIEG-QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSE 263
M++QP+ R+ G QA+D++I RK + + K A KT EQI D RP+YF+P E
Sbjct: 177 MLRQPLQRLSGMQASDIDIYRKITREKTQTMAKYLAVCTKKTEEQIMEDFIRPRYFNPYE 236
Query: 264 AVEYGIIDKVLYTEKSPEDHGVVSDLKK 291
AV YG+ID VL + E+ V D +K
Sbjct: 237 AVTYGLIDTVL---EPKEERVVFKDWEK 261
>gi|428774096|ref|YP_007165884.1| endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
gi|428688375|gb|AFZ48235.1| Endopeptidase Clp [Cyanobacterium stanieri PCC 7202]
Length = 228
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 143/216 (66%), Gaps = 11/216 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVP----------SVTELILAE 123
SP+ + P+ + PPPDL S L K RIVYLG+ V VTELI+A+
Sbjct: 3 SPIQAVQAPYRGDAYYRTPPPDLPSLLLKERIVYLGLPLVSPDEYKDQIGIDVTELIIAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
L+LQ++D +KPIYLYINSTGT+ GGE +G+ETEAFAI D + Y+KPP+ T+C+G A G
Sbjct: 63 LLFLQFDDPDKPIYLYINSTGTSWYGGESIGFETEAFAICDTINYIKPPVHTICLGQAMG 122
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
AA++L +G KG RA+LP++TI++ Q +GQATD++I +E+ K ++ + A+
Sbjct: 123 TAAMILASGTKGCRASLPNATIILHQSRQGAQGQATDIQIRAREVIVNKKAMMNILAEKT 182
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
G+ E+IE D R Y +P +A EYG+ID++L + K
Sbjct: 183 GQPVEKIEKDTDRMFYMNPQQAKEYGLIDRILESSK 218
>gi|87302966|ref|ZP_01085770.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282462|gb|EAQ74421.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 224
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 131/188 (69%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VT+LI+A+ L+L++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTQLIIAQLLFLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AGAKG+RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGHRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQA+D++I +E+ + K ++++ + + G++ EQ+ D R Y +P EA+EYG+I
Sbjct: 147 SGARGQASDIQIRAQEVLHNKRVMLEMLSHNTGRSVEQLSKDSDRMTYLTPREALEYGLI 206
Query: 271 DKVLYTEK 278
D++L ++K
Sbjct: 207 DRILTSQK 214
>gi|334182410|ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190278|gb|AEE28399.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 370
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+QP
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237
Query: 211 GRIEG--QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYG 268
G A+DV I KE+ + LV+L +KH G + E + +RRP Y +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297
Query: 269 IIDKVLY 275
+ID++L+
Sbjct: 298 VIDRILW 304
>gi|224103735|ref|XP_002313173.1| predicted protein [Populus trichocarpa]
gi|222849581|gb|EEE87128.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 90 EQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKG 148
E PPDL S L RI YLGM VP+VTEL++A+F+YL YED KPIYLYINS+GT +
Sbjct: 168 ESAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEK 227
Query: 149 GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
E +G ETEA+AI D+M Y K I+T+ G A+G+AA+LL GAKG RA P+S+ +
Sbjct: 228 METVGSETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYL 287
Query: 209 P-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEY 267
P + R G A D+ I KE+ ++L AK GK E++ DI+RPKY EA++Y
Sbjct: 288 PKVNRSSGAAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDY 347
Query: 268 GIIDKVL 274
GI DK+L
Sbjct: 348 GIADKLL 354
>gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190277|gb|AEE28398.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 330
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+QP
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 237
Query: 211 GRIEG--QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYG 268
G A+DV I KE+ + LV+L +KH G + E + +RRP Y +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297
Query: 269 IIDKVLY 275
+ID++L+
Sbjct: 298 VIDRILW 304
>gi|302773329|ref|XP_002970082.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
gi|300162593|gb|EFJ29206.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
Length = 300
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RIVYLGM+ VP+VTELI+AE L+L +++ KPIYLYIN +GT + E
Sbjct: 113 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKES 172
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G+ETEA+AI D M YVK ++T+ G A+G+AA+LL G KG RA PSS+ + P +
Sbjct: 173 VGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKLYAPKV 232
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+ G A D+ I KE+ + + L AK GK E+I DI+RPKYF EAVEYG+
Sbjct: 233 NQSSGSAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKEAVEYGLA 292
Query: 271 DKVL 274
DKV+
Sbjct: 293 DKVI 296
>gi|148906385|gb|ABR16347.1| unknown [Picea sitchensis]
Length = 393
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI+YLGM VP+VTEL++AE ++L Y++ KPIY YINS GT + E
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEP 230
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+ +ETEA+AI D++ YVKP ++TL G A+G+A +LL G KG+RA +PSST + P +
Sbjct: 231 IAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLPVV 290
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+ G + D+ I KE++ ++L AK GKT E+I DI+R +YF P EA++YGI
Sbjct: 291 NKSSGSSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEAIDYGIA 350
Query: 271 DKVL 274
DK+L
Sbjct: 351 DKIL 354
>gi|51970012|dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 103 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 162
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI+QP
Sbjct: 163 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPR 222
Query: 211 GRIEG--QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYG 268
G A+DV I KE+ + LV+L +KH G + E + +RRP Y +A E+G
Sbjct: 223 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 282
Query: 269 IIDKVLY 275
+ID++L+
Sbjct: 283 VIDRILW 289
>gi|302807086|ref|XP_002985274.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
gi|300147102|gb|EFJ13768.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
Length = 357
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RIVYLGM+ VP+VTELI+AE L+L +++ KPIYLYIN +GT + E
Sbjct: 134 PPDLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKES 193
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G+ETEA+AI D M YVK ++T+ G A+G+AA+LL G KG RA PSS+ + P +
Sbjct: 194 VGFETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKLYAPKV 253
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+ G A D+ I KE+ + + L AK GK E+I DI+RPKYF EAVEYG+
Sbjct: 254 NQSSGSAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKEAVEYGLA 313
Query: 271 DKVL 274
DKV+
Sbjct: 314 DKVI 317
>gi|443478433|ref|ZP_21068188.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443016285|gb|ELS30981.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 252
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+Y G+ V VTEL++A+ LYLQYED EKPI++YINSTGT+ G+
Sbjct: 55 KERIIYFGLPLVSPDEYKQQLGVDVTELLIAQLLYLQYEDPEKPIFMYINSTGTSWYTGD 114
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + Y+KPP+ T+C+G A G AA++L +G KG RA+LP++TI++ Q
Sbjct: 115 AIGFETEAFAICDTLNYIKPPVHTICLGQAMGTAAMILASGTKGFRASLPNATIVLHQAR 174
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+ GQA+D++I KE+ + ++K+ ++ GK+ E + D+ R Y +P +A EYG+I
Sbjct: 175 RQTRGQASDLQIQAKEVLTNRESMLKILSRTTGKSSEVLTKDMDRMFYMTPEQAKEYGLI 234
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 235 DRVLESTK 242
>gi|254431834|ref|ZP_05045537.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626287|gb|EDY38846.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 232
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDEAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWFTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP +TI++ QP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHATIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQA+D++I +E+ + K ++++ A + GK+ EQ+ D R Y + +A +YG+I
Sbjct: 147 SGAQGQASDIQIRAQEVLHNKRTMLQMLADNTGKSVEQLSKDSDRMTYLTAEQAKDYGLI 206
Query: 271 DKVLYTEK 278
D+VL ++K
Sbjct: 207 DRVLTSQK 214
>gi|51971563|dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 92 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGE 150
PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE
Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGE 177
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G E+E FAIYD + +K + T+CVG A G+A LLL AG KG R +P + MI++P
Sbjct: 178 TVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRPR 237
Query: 211 GRIEG--QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYG 268
G A+DV I KE+ + LV+L +KH G + E + +RRP Y +A E+G
Sbjct: 238 VPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFG 297
Query: 269 IIDKVLY 275
+ID++L+
Sbjct: 298 VIDRILW 304
>gi|148910727|gb|ABR18430.1| unknown [Picea sitchensis]
Length = 393
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 124/184 (67%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI+YLGM VP+VTEL++AE ++L Y++ KPIY YINS GT + E
Sbjct: 171 PPDLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEP 230
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+ +ETEA+AI D++ YVKP ++TL G A+G+A +LL G KG+RA +PSST + P +
Sbjct: 231 IAFETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLPVV 290
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+ G + D+ I KE++ ++L AK GKT E+I DI+R +YF P EA +YGI
Sbjct: 291 NKSSGSSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEANDYGIA 350
Query: 271 DKVL 274
DK+L
Sbjct: 351 DKIL 354
>gi|168026989|ref|XP_001766013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682656|gb|EDQ69072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 5/194 (2%)
Query: 86 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
G+A +P PPDL S L RI YLGM+ VP+VTELI+AE L+L +++ KPIY YINS
Sbjct: 115 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPSKPIYFYINS 174
Query: 143 TGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
+GT + E +G+ETEA+AI D + YVK ++T+ G A+G+AA+LL G KG RA PS
Sbjct: 175 SGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSIGEKGFRALQPS 234
Query: 202 STIMIKQP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
S+ + P + + G +TD+ I KE+ + L A GK+ E+I DIRRP+YF
Sbjct: 235 SSTKLYSPKVNQSSGSSTDMWIKGKELDANTDYYIDLLASGTGKSKEEIANDIRRPRYFR 294
Query: 261 PSEAVEYGIIDKVL 274
P EA++YG+ DK++
Sbjct: 295 PQEAIDYGLADKII 308
>gi|148240099|ref|YP_001225486.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 7803]
gi|147848638|emb|CAK24189.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 223
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 127/188 (67%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ +KPIY YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDNPDKPIYFYINSTGTSWYTGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQATD++I +E+ + K ++++ + + G++ E++ D R Y +P +A EYG+I
Sbjct: 147 SGARGQATDIQIRAQEVLHNKRAMLEILSTNTGRSVEELSKDSDRMSYLTPEQAKEYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLTSRK 214
>gi|434386911|ref|YP_007097522.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017901|gb|AFY93995.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 223
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 127/188 (67%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPSV----------TELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVY+G V S T+L++A+ LYLQ+++ EKPIY YINSTGT+ G+
Sbjct: 26 KERIVYMGGPLVSSDDYKRQMGYDPTKLLIAQLLYLQFDNPEKPIYFYINSTGTSWYTGD 85
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D +GY+KPP+ T+C+G A G AA++L AG KG RA+LP +TI++ QP
Sbjct: 86 SIGFETEAFAICDTLGYIKPPVHTICIGQAMGTAAMILAAGTKGCRASLPHATIVLNQPR 145
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
+GQA+D++I KE+ + K ++ +++ G+ E+I D R Y +P+EA EYG+I
Sbjct: 146 SGAQGQASDIQIRAKEVLDNKTAILDIFSHSTGQPAEKIAKDTDRMLYMTPTEAKEYGLI 205
Query: 271 DKVLYTEK 278
D VL + K
Sbjct: 206 DIVLNSAK 213
>gi|384251987|gb|EIE25464.1| hypothetical protein COCSUDRAFT_52875 [Coccomyxa subellipsoidea
C-169]
Length = 221
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 7/176 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RI YLGM VP+VTELI+AE LYLQY+D KPIYLYINSTGTT+ GE +G+ETE AIY
Sbjct: 23 RITYLGMPLVPAVTELIIAELLYLQYKDRTKPIYLYINSTGTTRADGETVGFETEGTAIY 82
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI----EGQAT 218
D M +VK + T+ VG A G+A +LL AG KG R LP +T M++QP R+ + QA
Sbjct: 83 DTMQFVKNEVHTVGVGVAMGQACMLLSAGHKGKRFMLPHATAMLQQP--RVPPTGQRQAI 140
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+++I +E+ K L+++ +K G + E+++ D++RP Y P +A+EYGIID ++
Sbjct: 141 EIQIKWREVLAQKQALLRILSKTTGHSEEKLDKDMQRPLYMQPPDAIEYGIIDGIV 196
>gi|317970580|ref|ZP_07971970.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0205]
Length = 225
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 128/188 (68%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTELI+A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG+RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQA+D++I KE+ + K ++++ A + GK+ E++ R Y + +AVE+G+I
Sbjct: 147 SGARGQASDIQIRAKEVLHNKRTMLEMLAANTGKSTEELSKASDRMTYLTAEQAVEFGLI 206
Query: 271 DKVLYTEK 278
D+VL ++K
Sbjct: 207 DRVLTSQK 214
>gi|255573147|ref|XP_002527503.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223533143|gb|EEF34901.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 308
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 121/184 (65%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F+YL Y+D KPIYLYINS+GT + E
Sbjct: 88 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYDDSSKPIYLYINSSGTQNEKMET 147
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA+AI D M Y K ++T+ G A+G+A +LL GAKG RA P+++ + P +
Sbjct: 148 VGSETEAYAIADAMFYCKSTVYTVNCGMAYGQAGMLLSLGAKGYRALQPNASTKLYLPKV 207
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE+ + L AK GKT E+I DI+RPKYF+ EA+EYG+
Sbjct: 208 NRSSGAVIDMWIKAKELDANTEYYIDLLAKGTGKTKEEINKDIQRPKYFNSKEAIEYGLA 267
Query: 271 DKVL 274
DK++
Sbjct: 268 DKIV 271
>gi|168061571|ref|XP_001782761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665734|gb|EDQ52408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 5/194 (2%)
Query: 86 GTAWEQP---PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINS 142
G+A +P PPDL S L RI YLGM+ VP+VTELI+AE L+L +++ KPIY YINS
Sbjct: 158 GSAGGRPKTAPPDLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPTKPIYFYINS 217
Query: 143 TGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPS 201
+GT + E +G+ETEA+AI D + YVK ++T+ G A+G+AA+LL G KG RA PS
Sbjct: 218 SGTQNEKKESIGFETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSLGEKGYRALQPS 277
Query: 202 STIMIKQP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
S+ + P + + G +TD+ I KE+ + L A GK+ E I DIRRP+YF
Sbjct: 278 SSTKLYSPKVNQSSGSSTDMWIKGKELDANTDYYIDLLASGTGKSKEVIANDIRRPRYFR 337
Query: 261 PSEAVEYGIIDKVL 274
P EAV+YG+ DK++
Sbjct: 338 PQEAVDYGLADKII 351
>gi|411118655|ref|ZP_11391036.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712379|gb|EKQ69885.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 228
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 12/190 (6%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG+ V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+ G+
Sbjct: 30 KERIIYLGLPLVSSDDFKRQLGVDVTKLIIAQLLYLQFNDPEKPIFFYINSTGTSWYTGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP- 209
+G ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RA+LP +TI++ QP
Sbjct: 90 AIGQETEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGFRASLPHATIVLNQPR 149
Query: 210 IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
+G QATD++I KE+ K + + +++ G+ PE+I D R Y +P +A EYG+
Sbjct: 150 MGMGRSQATDIQIRAKEVLANKQATLDILSQNTGQPPEKIAKDTDRMFYMTPQQAKEYGL 209
Query: 270 IDKVLYTEKS 279
ID+VL + K
Sbjct: 210 IDRVLESTKD 219
>gi|427702648|ref|YP_007045870.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345816|gb|AFY28529.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 223
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 127/188 (67%), Gaps = 11/188 (5%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ VTEL++A+ LYL++++ EKPI+ YINSTGT+ G+
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELVIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G+ETEAFAI D + YVKPP+ T+C+G A G AA++L AG KG RAALP ++I++ QP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHASIVLHQPR 146
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
GQA+D++I KE+ + K ++++ +++ GK+ +++ D R Y + EA+ YG+I
Sbjct: 147 SGARGQASDIQIRAKEVLHNKHSMLEILSENTGKSIDELSRDSDRMTYLTAEEAMAYGLI 206
Query: 271 DKVLYTEK 278
D+VL + K
Sbjct: 207 DRVLTSRK 214
>gi|302795281|ref|XP_002979404.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
gi|300153172|gb|EFJ19812.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
Length = 243
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 3/176 (1%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
+RIVY+GM VP+VTEL++AE LYLQY D PIY+YINSTGT++ GE +G ETE FAI
Sbjct: 30 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFAI 89
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--ATD 219
+D M VK I T+ VG A G+A LLL AG KG R LP +T MI+QP GQ A D
Sbjct: 90 HDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQPRMPSMGQMPAID 149
Query: 220 VEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
+ + KE+ + + LV+L A+H G E++ +RRP Y SP +A+++G++DK+L+
Sbjct: 150 LHLRAKEVIHNRDTLVELLAEHTGNPVEKVAKVMRRPYYMSPKKAMDFGVVDKILW 205
>gi|302817400|ref|XP_002990376.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
gi|302825342|ref|XP_002994294.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300137825|gb|EFJ04638.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300141938|gb|EFJ08645.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
Length = 235
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 3/176 (1%)
Query: 103 NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAI 161
+RIVY+GM VP+VTEL++AE LYLQY D PIY+YINSTGT++ GE +G ETE FAI
Sbjct: 22 SRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFAI 81
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--ATD 219
+D M VK I T+ VG A G+A LLL AG KG R LP +T MI+QP GQ A D
Sbjct: 82 HDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQPRMPSMGQMPAID 141
Query: 220 VEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
+ + KE+ + + LV+L A+H G E++ +RRP Y SP +A+++G++DK+L+
Sbjct: 142 LHLRAKEVIHNRDTLVELLAEHTGNPVEKVAKVMRRPYYMSPKKAMDFGVVDKILW 197
>gi|168025572|ref|XP_001765308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683627|gb|EDQ70036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 298
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFA 160
+RIVY+GM VP+VTEL++AE LYLQY D +PIY+YINSTGT++ GE +G ETE FA
Sbjct: 84 HSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTSRADGETVGLETEGFA 143
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--AT 218
IYD + V+ I T+ VG A G+A LLL +G KG R +P +T MI+QP GQ A
Sbjct: 144 IYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQPRLPSTGQMSAI 203
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ N + LV L AKH G E++ ++RP Y +P +AVE+G+ DK+L+
Sbjct: 204 DVHIRAKELINNRDTLVGLLAKHTGNPYEKVAKVMQRPFYMNPKKAVEFGVADKILW 260
>gi|209527270|ref|ZP_03275781.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|376003779|ref|ZP_09781582.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066151|ref|ZP_17054941.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
gi|209492337|gb|EDZ92681.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|375327810|emb|CCE17335.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712193|gb|EKD07382.1| hypothetical protein SPLC1_S410490 [Arthrospira platensis C1]
Length = 230
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 124/189 (65%), Gaps = 12/189 (6%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG V S VT+LI+A+ LYLQ+ D EKPIY YINSTGT+ G+
Sbjct: 32 KERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIYFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP- 209
+G +TEAFAI D M YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ QP
Sbjct: 92 AIGQDTEAFAICDTMSYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQPR 151
Query: 210 IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
+G QATD++I KE+ KA ++ + +++ G+ E+I D R Y +P A EYG+
Sbjct: 152 MGMGRSQATDIQIRAKEVLANKASILDILSQNTGQPVEKIAKDTDRMFYLTPEAAKEYGL 211
Query: 270 IDKVLYTEK 278
ID+VL + K
Sbjct: 212 IDRVLESTK 220
>gi|443310465|ref|ZP_21040116.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779503|gb|ELR89745.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 228
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 125/190 (65%), Gaps = 12/190 (6%)
Query: 102 KNRIVYLGMSFVP----------SVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RIVYLG+ V VTELI+A+ LYLQY+D EKPIY+YINSTGT+ GG+
Sbjct: 30 KERIVYLGLPLVTPDEYKQQLGVDVTELIIAQLLYLQYDDPEKPIYIYINSTGTSWYGGD 89
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI 210
+G ETEAFAI D + Y+KPP+ T+C+G A G AA++L AG KG RA+LP++TI++ Q
Sbjct: 90 AIGAETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFRASLPNATIVLHQAR 149
Query: 211 GRI-EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
R QATD++I KE+ K ++ + + G+ +I D+ R Y +P +A EYG+
Sbjct: 150 RRAPYSQATDIQIHAKEVFVNKEIILDILTANTGQEKTKIAKDMDRMYYMTPHQAKEYGL 209
Query: 270 IDKVLYTEKS 279
IDKVL + K
Sbjct: 210 IDKVLESSKD 219
>gi|255639455|gb|ACU20022.1| unknown [Glycine max]
Length = 364
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+ + P +
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPKV 268
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE++ ++L AK GK+ E+I D++RPKY +A++YGI
Sbjct: 269 NRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQDAIDYGIA 328
Query: 271 DKVL 274
DK++
Sbjct: 329 DKII 332
>gi|356536107|ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+ + P +
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPKV 268
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE++ ++L AK GK+ E+I D++RPKY +A++YGI
Sbjct: 269 NRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQDAIDYGIA 328
Query: 271 DKVL 274
DK++
Sbjct: 329 DKII 332
>gi|225450774|ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 118/175 (67%), Gaps = 3/175 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQ+ D ++P+Y+YIN TGTT+ GE++G ETE FAIY
Sbjct: 120 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFAIY 179
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--ATDV 220
D M +K I T+ VG A G+A LLL AG KG R +P + MI+QP G A+DV
Sbjct: 180 DAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDV 239
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
I KE+ + LVKL AKH G + E + +RRP Y ++A E+G+IDK+L+
Sbjct: 240 LIRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPYYMDSTKAKEFGVIDKILW 294
>gi|409990520|ref|ZP_11273883.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
gi|409938617|gb|EKN79918.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
Length = 202
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 12/191 (6%)
Query: 100 LYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KG 148
L K RI+YLG V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+
Sbjct: 2 LLKERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYT 61
Query: 149 GEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ 208
G+ +G +TEAFAI D + YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ Q
Sbjct: 62 GDAIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQ 121
Query: 209 P-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEY 267
P +G QATD++I KE+ KA ++ + +K+ G+ E+I D R Y +P A EY
Sbjct: 122 PRMGMGRSQATDIQIRAKEVLANKASILGILSKNTGQPVEKIAKDTDRMFYLTPEAAKEY 181
Query: 268 GIIDKVLYTEK 278
G+ID+VL + K
Sbjct: 182 GLIDRVLESTK 192
>gi|168013355|ref|XP_001759365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689295|gb|EDQ75667.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFA 160
+RIVY+GM VP+VTEL++AE LYLQY D +PIY+YINSTGT + GE +G ETE FA
Sbjct: 82 NSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTARADGETVGLETEGFA 141
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--AT 218
IYD + V+ I T+ VG A G+A LLL +G KG R +P +T MI+QP GQ A
Sbjct: 142 IYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQPRLPSTGQMSAI 201
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ N + LV L AKH G E++ + RP Y +P +AV++G+ DK+L+
Sbjct: 202 DVHIRAKELINNRDTLVGLLAKHTGNPVEKVAKVMERPFYMNPKKAVDFGVADKILW 258
>gi|356575728|ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Glycine max]
Length = 372
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT + E
Sbjct: 149 PPDLPSLLLDARICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTLNEKNET 208
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA++I D+M YVK ++T+ G A+G+AA+LL G KG RA P+S+ + P +
Sbjct: 209 VGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPKV 268
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE++ ++L AK GK+ E+I D++RPKY +A++YGI
Sbjct: 269 NRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRPKYLQAQDAIDYGIA 328
Query: 271 DKVL 274
DK++
Sbjct: 329 DKII 332
>gi|384247124|gb|EIE20612.1| hypothetical protein COCSUDRAFT_10544, partial [Coccomyxa
subellipsoidea C-169]
Length = 228
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 135/212 (63%), Gaps = 4/212 (1%)
Query: 86 GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT 145
G A Q PPDL S L RI Y+GM VP+VTELI++E L+L + EKP+Y+YI+S G+
Sbjct: 1 GAAPGQAPPDLPSLLLDGRICYIGMPLVPAVTELIISELLWLNFSYPEKPVYVYIHSIGS 60
Query: 146 -TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
T G+ +G++TEA+AI D + Y++P I T+ VG A+G AA++L +G KG R ALP + I
Sbjct: 61 QTPDGQAVGFDTEAYAIIDTLNYIRPEIHTVVVGQAFGNAAMILASGKKGCRFALPHARI 120
Query: 205 MIKQP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSE 263
M P I R G +++ I E++ V+ +K+ G+ E++ D+ R +YF+P +
Sbjct: 121 MTAPPRINRSFGSTSNIMIKANELEYNTQTYVEFLSKYTGREKEEVRKDVGRNRYFTPEQ 180
Query: 264 AVEYGIIDKVLYTEKSP--EDHGVVSDLKKAQ 293
A+EYG+ID+++ + S E+ + L KAQ
Sbjct: 181 AIEYGLIDRIVQPQDSVAMEEKNYEAMLAKAQ 212
>gi|86608098|ref|YP_476860.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556640|gb|ABD01597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 211
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 10/200 (5%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFV----PSVTELILAEFLYLQYEDVEKPIYL 138
+ G PPPDLAS L + RIVYLG+ +VT+LI+ + LYLQYED EKPI +
Sbjct: 8 YYGGAPVRTPPPDLASLLLQERIVYLGLPLAEESNANVTKLIIEQLLYLQYEDREKPIKM 67
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINSTGT Y+T AFAI D M Y+KPP+ T+C+GNA G AA+LL AGAKG RA+
Sbjct: 68 YINSTGT------YNYDTAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRAS 121
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LP++TI++ QP G GQA+D+EI +E+ ++ +++ ++ G+ E+I+ D R +
Sbjct: 122 LPNATIVLHQPYGGTRGQASDIEIRTREILTLRNMMLEQLSRSTGQPMERIKKDTERLFF 181
Query: 259 FSPSEAVEYGIIDKVLYTEK 278
+P EA YG+ID+VL + K
Sbjct: 182 MTPEEAKAYGLIDQVLTSSK 201
>gi|86605370|ref|YP_474133.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553912|gb|ABC98870.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 210
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 10/201 (4%)
Query: 83 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFV----PSVTELILAEFLYLQYEDVEKPIYL 138
+ G PPPDLAS L + RIVYLG+ +VT+LI+ + LYLQYED EKPI +
Sbjct: 7 YYGGAPVRTPPPDLASLLLQERIVYLGLPLAEEANANVTKLIVEQLLYLQYEDREKPIKM 66
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINSTGT Y+T AFAI D M Y+KPP+ T+C+GNA G AA+LL AGAKG RA+
Sbjct: 67 YINSTGT------YSYDTAAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRAS 120
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LP++TI++ QP G GQA+D+EI +E+ ++ +++ ++ G+ E+I+ D R +
Sbjct: 121 LPNATIVLHQPYGGTRGQASDIEIRTREILTLRNMMLEELSRSTGQPIERIKKDTERLFF 180
Query: 259 FSPSEAVEYGIIDKVLYTEKS 279
+P EA YG+ID+VL + K+
Sbjct: 181 MTPEEAKAYGLIDQVLTSSKA 201
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 115/181 (63%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IY+YINS G G
Sbjct: 24 DIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+C+G A A LL AGAKG R +LP++ IMI QP+G +
Sbjct: 76 VTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARIMIHQPLGGFQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ +K L + AKH G+ E+IEAD R + S EA EYG+IDKV+
Sbjct: 136 GQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAKEYGLIDKVI 195
Query: 275 Y 275
Y
Sbjct: 196 Y 196
>gi|395232657|ref|ZP_10410907.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
gi|394733059|gb|EJF32698.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
Ag1]
Length = 207
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 124/203 (61%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L A+H GK+ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAKEILKVKARMNELMAEHTGKSLEQIEK 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S SEAVEYG++D +L
Sbjct: 181 DTERDRFLSASEAVEYGLVDSIL 203
>gi|387890168|ref|YP_006320466.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|414595522|ref|ZP_11445141.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
gi|386925001|gb|AFJ47955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
DSM 4481]
gi|403193485|dbj|GAB82793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia blattae
NBRC 105725]
Length = 207
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 123/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH GK EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGKPLEQIEN 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S SEAVEYG++D +L
Sbjct: 181 DTERDRFLSASEAVEYGLVDSIL 203
>gi|291569212|dbj|BAI91484.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 230
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 124/189 (65%), Gaps = 12/189 (6%)
Query: 102 KNRIVYLGMSFVPS----------VTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGE 150
K RI+YLG V S VT+LI+A+ LYLQ+ D EKPI+ YINSTGT+ G+
Sbjct: 32 KERIIYLGSPLVSSDEYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYTGD 91
Query: 151 KLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP- 209
+G +TEAFAI D + YVKPP+ T+C+G A G AA++L AG KG R +LP +TI++ QP
Sbjct: 92 AIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQPR 151
Query: 210 IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGI 269
+G QATD++I KE+ KA ++ + +K+ G+ E+I D R Y +P A EYG+
Sbjct: 152 MGMGRSQATDIQIRAKEVLANKASILGILSKNTGQPVEKIAKDTDRMFYLTPEAAKEYGL 211
Query: 270 IDKVLYTEK 278
ID+VL + K
Sbjct: 212 IDRVLESTK 220
>gi|365969260|ref|YP_004950821.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
gi|365748173|gb|AEW72400.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae EcWSU1]
Length = 233
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 127/210 (60%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 34 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 87
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 88 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 139
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 140 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 199
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D VL
Sbjct: 200 SLEQIERDTERDRFLSASEAVEYGLVDSVL 229
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 126/206 (61%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 17 QTAPHMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 73
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 74 AENPEKDIHLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLL 125
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R ALP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H GKT E+
Sbjct: 126 TAGTKGKRYALPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGKTLEE 185
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAVEYG++D VL
Sbjct: 186 IERDTERDRFLSASEAVEYGLVDSVL 211
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 124/210 (59%), Gaps = 17/210 (8%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
SK +++ ++P EQ P D+ S L K+RI+ LG + LI+A+
Sbjct: 2 SKDLDSIVSQLVPIV----IEQTPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQL 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ ED EK IY+YINS G G T AIYD M Y+KP + T+C+G A
Sbjct: 58 LFLESEDPEKDIYMYINSPG--------GVVTSGLAIYDTMRYIKPDVVTICMGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R ALPSS IMI QP+G +GQATD+EI KE+ +K L + A+H G+
Sbjct: 110 AFLLSAGAKGKRYALPSSRIMIHQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E+IE D R + S +AVEYG+IDKV+
Sbjct: 170 PLEKIERDTERDFFMSAHDAVEYGLIDKVI 199
>gi|388520115|gb|AFK48119.1| unknown [Medicago truncatula]
Length = 373
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 127/186 (68%), Gaps = 2/186 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L +RI YLGM VP+VTELILA+ ++L Y++ KP+Y+YINS+GT + E
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ET+A++I D++ ++K ++T+ + A+G+AA++L G KG RA LP S+ + P +
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKVFLPKV 272
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G A D+ I KE++ ++L AK GK+ E+I D++R +YF P +A+EYG+
Sbjct: 273 HRSSGSAADMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYGLA 332
Query: 271 DKVLYT 276
DK++++
Sbjct: 333 DKIMHS 338
>gi|297852688|ref|XP_002894225.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
gi|297340067|gb|EFH70484.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E
Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMET 228
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA+AI D + Y K ++T+ G A+G+AA+LL G KG RA P S+ + P +
Sbjct: 229 VGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKV 288
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G A D+ I KE+ ++L AK GK+ EQI DI+RPKY A++YGI
Sbjct: 289 NRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIA 348
Query: 271 DKVLYTEKS 279
DK+ ++ S
Sbjct: 349 DKIADSQDS 357
>gi|18402863|ref|NP_564560.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
gi|75315328|sp|Q9XJ35.1|CLPR1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 1, chloroplastic; Short=ClpR1;
AltName: Full=nClpP5; Flags: Precursor
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5 from Arabidopsis thaliana gb|AB022330 and
contains prenyltransferase PF|00432 and CLP protease
PF|00574 domains. ESTs gb|H76908, gb|AA605567,
gb|T21932, gb|T22976 come from this gene [Arabidopsis
thaliana]
gi|5360595|dbj|BAA82069.1| nClpP5 [Arabidopsis thaliana]
gi|15010752|gb|AAK74035.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|332194380|gb|AEE32501.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
Length = 387
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E
Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMET 228
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA+AI D + Y K ++T+ G A+G+AA+LL G KG RA P S+ + P +
Sbjct: 229 VGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKV 288
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G A D+ I KE+ ++L AK GK+ EQI DI+RPKY A++YGI
Sbjct: 289 NRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIA 348
Query: 271 DKVLYTEKS 279
DK+ ++ S
Sbjct: 349 DKIADSQDS 357
>gi|356572984|ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Glycine max]
Length = 327
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 7/177 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQY D ++PIY+YINSTGTT+ GE +G ETE FAIY
Sbjct: 125 RIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIY 184
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ----AT 218
D M +K I T+ VG+A G+A LLL AG+ G R +P + MI+QP RI A+
Sbjct: 185 DAMMQLKNEIHTVAVGSAIGQACLLLSAGSPGKRFMMPHAKAMIQQP--RIPSSGLMPAS 242
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ + LVKL AKH G + E + ++RP Y + A E+G+ID++L+
Sbjct: 243 DVLIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILW 299
>gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 207
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|225428973|ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic [Vitis vinifera]
gi|296083061|emb|CBI22465.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 119/184 (64%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI YLGM VP+V EL++A+F++L +++ KPIYLYINSTGT + E
Sbjct: 167 PPDLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKMET 226
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ETEA+AI D M Y K ++T+ G A+G+AA+LL GAKG R P+++ + P +
Sbjct: 227 VGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYLPKV 286
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE+ ++L AK GKT E+I+ D+ RPKY EA++YG+
Sbjct: 287 NRSSGATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIKKDVERPKYLQAQEAIDYGLA 346
Query: 271 DKVL 274
DK++
Sbjct: 347 DKII 350
>gi|365848314|ref|ZP_09388791.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
gi|364571022|gb|EHM48621.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Yokenella regensburgei ATCC 43003]
Length = 220
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 14/214 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 21 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 74
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 75 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 126
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L A H G+
Sbjct: 127 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAKEILKVKARMNELMAHHTGQ 186
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ EQIE D R ++ S EAVEYG++D +L K
Sbjct: 187 SLEQIENDTERDRFLSAGEAVEYGLVDSILTHRK 220
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y+KP + T+C+G A A+LL AGAKG R ALP S IMI QP+G I+
Sbjct: 78 VTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRIMIHQPLGGIQ 137
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+K +K L ++ AKH G+ E+IE D+ R + S EA +YG+IDKV+
Sbjct: 138 GQATDIIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYFMSAEEAKDYGVIDKVI 197
>gi|226505068|ref|NP_001149025.1| LOC100282645 [Zea mays]
gi|195624074|gb|ACG33867.1| ATP-dependent Clp protease proteolytic subunit-like [Zea mays]
gi|414866760|tpg|DAA45317.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea
mays]
gi|414866761|tpg|DAA45318.1| TPA: ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea
mays]
Length = 339
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 119/179 (66%), Gaps = 7/179 (3%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FA
Sbjct: 135 HGRIVYIGMPLVPAVTELIVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFA 194
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG----Q 216
IYD M +K I TLC+G A G A L+L AG KG R P + MI+QP RI Q
Sbjct: 195 IYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQP--RIPSYGMMQ 252
Query: 217 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
A+DV I KE+ + + LVKL A+H G PE+I+ +R P Y +A E+G+IDK+L+
Sbjct: 253 ASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILW 311
>gi|357444423|ref|XP_003592489.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355481537|gb|AES62740.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 373
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L +RI YLGM VP+VTELILA+ ++L Y++ KP+Y+YINS+GT + E
Sbjct: 153 PPDLPSLLLDSRICYLGMPIVPAVTELILAQLMWLDYDNPAKPVYVYINSSGTQNEKNET 212
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G ET+A++I D++ ++K ++T+ + A+G+AA++L G KG RA LP S+ + P +
Sbjct: 213 VGSETDAYSIADMISHIKSDVYTVNLAMAYGQAAMILSLGKKGYRAVLPHSSAKVFLPKV 272
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R G D+ I KE++ ++L AK GK+ E+I D++R +YF P +A+EYG+
Sbjct: 273 HRSSGSVADMWIKAKELEANSEYYIELLAKGTGKSKEEIAKDVQRTRYFQPQDAIEYGLA 332
Query: 271 DKVLYT 276
DK++++
Sbjct: 333 DKIMHS 338
>gi|317492909|ref|ZP_07951333.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835459|ref|ZP_09376878.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
gi|316919031|gb|EFV40366.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566034|gb|EHM43738.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Hafnia
alvei ATCC 51873]
Length = 206
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 8/209 (3%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSGERDLAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGA 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LL AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH GK
Sbjct: 114 FLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHSGKP 173
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E+IE D R ++ S EAVEYG++D V+
Sbjct: 174 LEEIERDTERDRFLSADEAVEYGLVDSVM 202
>gi|401678822|ref|ZP_10810776.1| ClpP Protein [Enterobacter sp. SST3]
gi|400213918|gb|EJO44850.1| ClpP Protein [Enterobacter sp. SST3]
Length = 207
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
EQIE D R ++ S SEAVEYG++D VL
Sbjct: 174 PLEQIERDTERDRFLSASEAVEYGLVDSVL 203
>gi|37523336|ref|NP_926713.1| ATP-dependent Clp protease-like protein [Gloeobacter violaceus PCC
7421]
gi|81708690|sp|Q7NEW1.1|CLPP2_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|35214340|dbj|BAC91708.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 218
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 111/171 (64%), Gaps = 6/171 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYD 163
RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD
Sbjct: 37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYD 90
Query: 164 VMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIA 223
M +V+ PI T+C+G A G +ALL+ AG KG R +LP+S I++ QP G GQATD+ I
Sbjct: 91 TMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIR 150
Query: 224 RKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+E+ K L +L + H GKT EQI+ D R Y SP EAV YG+IDKVL
Sbjct: 151 AQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVL 201
>gi|383816700|ref|ZP_09972092.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
gi|383294412|gb|EIC82754.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. M24T3]
Length = 209
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 124/203 (61%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R ALP+S +MI QP+G +GQATD++I +E+ VK + L A+H GK+ E+IE
Sbjct: 121 AKGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILKVKNRMNTLMAQHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S SEAVEYG++DKV+
Sbjct: 181 DTERDRFLSASEAVEYGLVDKVM 203
>gi|108708097|gb|ABF95892.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|218192812|gb|EEC75239.1| hypothetical protein OsI_11536 [Oryza sativa Indica Group]
gi|222624913|gb|EEE59045.1| hypothetical protein OsJ_10812 [Oryza sativa Japonica Group]
Length = 341
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 15/205 (7%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FAIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG----QAT 218
D M +K I TLC+G A G A L+L AG KG R P + MI+QP RI QA+
Sbjct: 199 DAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQP--RIPSYGMMQAS 256
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY--T 276
DV I KE+ + + LV+L A+H G PE+I+ +R P Y +A E+G+IDK+L+
Sbjct: 257 DVVIRAKEVVHNRNTLVRLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILWRGQ 316
Query: 277 EK------SPEDHGVVSDLKKAQLI 295
EK SPE+ V+ +++ ++
Sbjct: 317 EKYMADMLSPEEWDKVAGVRRPDIM 341
>gi|444352821|ref|YP_007388965.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
gi|443903651|emb|CCG31425.1| ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
[Enterobacter aerogenes EA1509E]
Length = 220
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 21 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 74
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 75 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 126
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 127 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 186
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 187 SLEQIERDTERDRFLSASEAVEYGLVDSIL 216
>gi|261822507|ref|YP_003260613.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
wasabiae WPP163]
gi|261606520|gb|ACX89006.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae WPP163]
gi|385872815|gb|AFI91335.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium sp.
SCC3193]
Length = 207
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA++ +L AKH G+ E
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAVEYG++D V
Sbjct: 178 IERDTERDRFLSASEAVEYGLVDSVF 203
>gi|336249036|ref|YP_004592746.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|365104949|ref|ZP_09334341.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|375259344|ref|YP_005018514.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|395228096|ref|ZP_10406420.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|397656325|ref|YP_006497027.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|402843112|ref|ZP_10891514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|420370111|ref|ZP_14870727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|421843723|ref|ZP_16276883.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|423101608|ref|ZP_17089310.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|423106996|ref|ZP_17094691.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|423112881|ref|ZP_17100572.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|423127775|ref|ZP_17115454.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|424730593|ref|ZP_18159188.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440288751|ref|YP_007341516.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|334735092|gb|AEG97467.1| hypothetical protein EAE_12765 [Enterobacter aerogenes KCTC 2190]
gi|363643890|gb|EHL83194.1| ATP-dependent Clp protease proteolytic subunit [Citrobacter
freundii 4_7_47CFAA]
gi|365908822|gb|AEX04275.1| hypothetical protein KOX_12745 [Klebsiella oxytoca KCTC 1686]
gi|376389122|gb|EHT01814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5243]
gi|376390375|gb|EHT03061.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5245]
gi|376391396|gb|EHT04075.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5242]
gi|376394814|gb|EHT07464.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5250]
gi|391320540|gb|EIQ77372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1235-66]
gi|394344931|gb|AFN31052.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
E718]
gi|394718218|gb|EJF23855.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp. A1]
gi|402277743|gb|EJU26811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. OBRC7]
gi|411775444|gb|EKS58890.1| hypothetical protein D186_01745 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422894786|gb|EKU34593.1| atp-dependent clp protease proteolytic subunit [Citrobacter sp.
L17]
gi|440048273|gb|AGB79331.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Enterobacteriaceae bacterium strain FGI 57]
gi|455641803|gb|EMF20974.1| hypothetical protein H262_21028 [Citrobacter freundii GTC 09479]
Length = 207
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSASEAVEYGLVDSIL 203
>gi|237730414|ref|ZP_04560895.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905953|gb|EEH91871.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 243
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 209
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 210 SLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|308807867|ref|XP_003081244.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
gi|116059706|emb|CAL55413.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
Length = 335
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP Y+YINS G+ + GE
Sbjct: 101 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSINEKGEV 160
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G + EA+AI D M Y++ PI T+ VG G A+L+L G KG R ALP I P +
Sbjct: 161 VGMDNEAYAILDTMRYIRSPIHTVAVGKCHGNASLILAGGDKGRRHALPHVQISTGPPKL 220
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R +V+I E + + L A++ GK E + D+ R +YF+P++A+EYGII
Sbjct: 221 NRTFDSTQNVQIRANECAMYEDTYMDLMAEYTGKDGETVRKDLDRTRYFTPNQAIEYGII 280
Query: 271 DKVL 274
DKV+
Sbjct: 281 DKVI 284
>gi|345298112|ref|YP_004827470.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392977875|ref|YP_006476463.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|401762532|ref|YP_006577539.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|345092049|gb|AEN63685.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
asburiae LF7a]
gi|392323808|gb|AFM58761.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. dissolvens SDM]
gi|400174066|gb|AFP68915.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 207
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 126/210 (60%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D VL
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|157146946|ref|YP_001454265.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
gi|157084151|gb|ABV13829.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 209
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 210 SLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|146310565|ref|YP_001175639.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317441|gb|ABP59588.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterobacter
sp. 638]
Length = 207
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S SEAVEYG++D +L
Sbjct: 181 DTERDRFLSASEAVEYGLVDSIL 203
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 122/205 (59%), Gaps = 17/205 (8%)
Query: 76 VITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
++ +IP EQ P D+ S L K+RI+ LG + L++A+ L+L+ E
Sbjct: 4 ILNQLIPIV----IEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESE 59
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D +K IY+YINS G G T AIYD M Y+KP + T+C+G A A LL A
Sbjct: 60 DPDKDIYMYINSPG--------GVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSA 111
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
GAKG R +LP++ IMI QP+G +GQATD+EI KE+ +K L + AKH G+ E+IE
Sbjct: 112 GAKGKRYSLPNARIMIHQPLGGFQGQATDIEIHAKEILRLKRMLNEYLAKHTGQPIEKIE 171
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVLY 275
AD R + S EA EYG+IDKV+Y
Sbjct: 172 ADTERDYFMSAEEAKEYGLIDKVIY 196
>gi|412990638|emb|CCO18010.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT---TKGG 149
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP YLYI+S G+ K G
Sbjct: 160 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPAYLYIHSAGSMGKDKDG 219
Query: 150 --EKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIK 207
E +G + EA+AI D M Y+KP I T+ VG +G AAL+L AG KG R ALP++ I
Sbjct: 220 RDEVVGVDNEAYAIIDTMRYIKPKIHTVAVGKTYGNAALILAAGDKGCRWALPNAQIATA 279
Query: 208 QP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
P + R+ +TDV++ E+ + GK E I D+ R KYF+P +A+E
Sbjct: 280 PPRLNRMFNTSTDVQVRANEVDVCENYYFGFMQAFTGKDKETIAKDMSRTKYFTPEKAIE 339
Query: 267 YGIIDKVL 274
YG++DK++
Sbjct: 340 YGLVDKII 347
>gi|50120087|ref|YP_049254.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389567|sp|Q6D827.1|CLPP_ERWCT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49610613|emb|CAG74058.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 207
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ + ++P + +V TA + D+ S L K RI++L + L++A+ L+L+
Sbjct: 6 EQERQAPHMALVPMVVEQTARGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA++ +L AKH G+ E
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAVEYG++D V
Sbjct: 178 IERDTERDRFLSASEAVEYGLVDSVF 203
>gi|408792290|ref|ZP_11203900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463700|gb|EKJ87425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
Length = 200
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + + +I A+ L+L+ E+ ++ IYLYINS G GY
Sbjct: 20 DIFSRLLKDRIIFLGSAIDETYANVISAQLLFLEAENPDRDIYLYINSPG--------GY 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M +KP + TLC+G A AALLL GAKG R+ALP+S IM+ QP G
Sbjct: 72 VSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNSRIMLHQPYGGAG 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI+ KE+ +K +L+ LY +H GK+ +Q+ D R + S EA +YGIID V+
Sbjct: 132 GQASDIEISAKEIIKIKDKLIDLYGRHTGKSSDQVRKDTERNFFMSAEEAKDYGIIDNVI 191
Query: 275 YTEK 278
K
Sbjct: 192 QERK 195
>gi|329296782|ref|ZP_08254118.1| ClpP [Plautia stali symbiont]
Length = 207
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPTNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ EQI
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|253990891|ref|YP_003042247.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
gi|253782341|emb|CAQ85505.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
Length = 207
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TA + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVI---EQTARGERSFDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
A+G R LP+S +MI QP+G +GQA+D+EI +E+ VK + L AKH GK+ E+IE
Sbjct: 121 AEGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAQEILKVKGRMNSLMAKHTGKSLEEIEK 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S SEAVEYG++DK+
Sbjct: 181 DTERDRFLSASEAVEYGLVDKIF 203
>gi|308800244|ref|XP_003074903.1| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
gi|119358826|emb|CAL52171.2| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
Length = 297
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 118/176 (67%), Gaps = 7/176 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LYLQY D +KP Y+YINSTG T+ GE +G+ETEA AIY
Sbjct: 97 RIVYIGMPLVPAVTELIVSELLYLQYADQKKPCYIYINSTGCTRADGEVVGFETEATAIY 156
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI----EGQAT 218
D M Y+ I+T+ G A G+A +LL AG KG R P +T M+ QP R+ E QAT
Sbjct: 157 DTMKYIGNEIYTVGTGVAVGQACVLLSAGDKGKRFMTPHATAMLHQP--RVPSTGERQAT 214
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
++ I E K L+ + +K G + E+++ D+RRP Y + ++A++YG+ DK++
Sbjct: 215 ELNIKWHETLAQKKTLLNVLSKTTGHSVEKLDKDMRRPLYMTAADAIQYGVADKIV 270
>gi|317047175|ref|YP_004114823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
gi|316948792|gb|ADU68267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
Length = 207
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 123/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ EQI
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|291085757|ref|ZP_06571180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
gi|291069764|gb|EFE07873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
Length = 243
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R++++ + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFMTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 209
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S SEAVEYG++D +L
Sbjct: 210 SLEQIERDTERDRFLSASEAVEYGLVDSIL 239
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 73 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA K + ++ L + A+ G+ E+I+ D R + S +EAVEYG+IDKV+
Sbjct: 133 GQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 192
Query: 275 YTEKS 279
+E S
Sbjct: 193 TSEPS 197
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP + IMI QP+G +
Sbjct: 76 VTAGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGFQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L ++ +KH G++ +IE D R + S EA +YG+IDKVL
Sbjct: 136 GQATDIEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMSAEEAQKYGLIDKVL 195
>gi|326494016|dbj|BAJ85470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495362|dbj|BAJ85777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511045|dbj|BAJ91870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 125/202 (61%), Gaps = 15/202 (7%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL + + +P Y+YINSTGT + GE +G ETE FA
Sbjct: 133 HGRIVYIGMPLVPAVTELIVAQLMYLDWMNSSEPAYIYINSTGTARDDGEPVGMETEGFA 192
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG----Q 216
IYD M +K + TLC+G A G A L+L AG KG R P + +I+QP RI Q
Sbjct: 193 IYDAMMRMKTEVHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKALIQQP--RIPSYGMMQ 250
Query: 217 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYT 276
A+DV I KE+ + + LVKL A+H G PE+I+ +R P Y +A E+G+IDK+L+
Sbjct: 251 ASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILWR 310
Query: 277 EK--------SPEDHGVVSDLK 290
+ SPED V+ ++
Sbjct: 311 GQEKYMSDMLSPEDWDKVAGVR 332
>gi|239907453|ref|YP_002954194.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
gi|259585949|sp|C4XH03.1|CLPP_DESMR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239797319|dbj|BAH76308.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
Length = 202
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 114/187 (60%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI QP G +
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATGMRYALPHSRIMIHQPSGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE + + L ++ AKH G++ E+I+ D R + S EAV YG+IDKVL
Sbjct: 131 GQATDIEIHAKETRRTRETLNEIMAKHTGQSMERIQVDTERDNFMSAEEAVAYGLIDKVL 190
Query: 275 YTEKSPE 281
+ + E
Sbjct: 191 TSRERLE 197
>gi|123443342|ref|YP_001007316.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257505|ref|ZP_14760262.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|2493738|sp|Q60107.1|CLPP_YEREN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214722|sp|A1JNN2.1|CLPP_YERE8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1377852|gb|AAC45782.1| ClpP [Yersinia enterocolitica]
gi|122090303|emb|CAL13169.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515019|gb|EKA28797.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 207
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VK+ + +L AKH GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D V
Sbjct: 181 DTERDRFLSADEAVEYGLVDSVF 203
>gi|224284163|gb|ACN39818.1| unknown [Picea sitchensis]
Length = 327
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
+RI+++GM VP+VTEL++AEFLYLQ+ D +P Y+YINSTGT++ GE + ETE FA
Sbjct: 113 NSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFA 172
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--AT 218
IYD M +K I T+ G A G+A LLL AG KG R LP + ++++QP GQ A
Sbjct: 173 IYDTMMQMKNEIHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQPRLPATGQMPAI 232
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ + + VKL AKH G E + + RP Y P +AVE+G+ DK+L+
Sbjct: 233 DVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFYMFPRQAVEFGVADKILW 289
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 71 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA K + ++ L + A+ G+ E+I+ D R + S +EAVEYG+IDKV+
Sbjct: 131 GQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAVEYGLIDKVI 190
Query: 275 YTEKS 279
+E S
Sbjct: 191 TSEPS 195
>gi|227113465|ref|ZP_03827121.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253687443|ref|YP_003016633.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|403057519|ref|YP_006645736.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
gi|251754021|gb|ACT12097.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|402804845|gb|AFR02483.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 207
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA++ +L AKH G+ E
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAV+YG++D V
Sbjct: 178 IERDTERDRFLSASEAVDYGLVDSVF 203
>gi|421083044|ref|ZP_15543923.1| Putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae CFBP 3304]
gi|401702270|gb|EJS92514.1| Putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae CFBP 3304]
Length = 207
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA++ +L AKH G+ E
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHSGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAVEYG++D V
Sbjct: 178 IERDTERDRFLSASEAVEYGLVDSVF 203
>gi|206578475|ref|YP_002240083.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae 342]
gi|238893386|ref|YP_002918120.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288936834|ref|YP_003440893.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|290510110|ref|ZP_06549480.1| Clp protease [Klebsiella sp. 1_1_55]
gi|365138464|ref|ZP_09345148.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|386033452|ref|YP_005953365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|419973312|ref|ZP_14488737.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978496|ref|ZP_14493792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983882|ref|ZP_14499031.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989934|ref|ZP_14504908.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995813|ref|ZP_14510618.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000724|ref|ZP_14515382.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007650|ref|ZP_14522143.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013285|ref|ZP_14527596.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018370|ref|ZP_14532567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024461|ref|ZP_14538474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030219|ref|ZP_14544046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035322|ref|ZP_14548986.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041656|ref|ZP_14555152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047717|ref|ZP_14561033.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053419|ref|ZP_14566597.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058263|ref|ZP_14571276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064551|ref|ZP_14577360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070362|ref|ZP_14583014.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076107|ref|ZP_14588580.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084374|ref|ZP_14596634.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|424829257|ref|ZP_18253985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934796|ref|ZP_18353168.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425078088|ref|ZP_18481191.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425080158|ref|ZP_18483255.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425088721|ref|ZP_18491814.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|425090280|ref|ZP_18493365.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149078|ref|ZP_18996910.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933610|ref|ZP_19007158.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|428939231|ref|ZP_19012344.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|449060067|ref|ZP_21737739.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
gi|206567533|gb|ACI09309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238545702|dbj|BAH62053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891543|gb|ADC59861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|289776826|gb|EFD84824.1| Clp protease [Klebsiella sp. 1_1_55]
gi|339760580|gb|AEJ96800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae KCTC 2242]
gi|363654924|gb|EHL93797.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella sp.
4_1_44FAA]
gi|397348784|gb|EJJ41882.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351567|gb|EJJ44650.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354933|gb|EJJ47959.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366797|gb|EJJ59412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368455|gb|EJJ61061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372939|gb|EJJ65411.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380234|gb|EJJ72419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384351|gb|EJJ76471.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390327|gb|EJJ82237.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399076|gb|EJJ90733.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402040|gb|EJJ93652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408058|gb|EJJ99434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416557|gb|EJK07730.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418193|gb|EJK09352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424204|gb|EJK15111.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433257|gb|EJK23907.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437304|gb|EJK27873.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441744|gb|EJK32110.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447618|gb|EJK37808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450260|gb|EJK40370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405591067|gb|EKB64580.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601813|gb|EKB74966.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405607083|gb|EKB80053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613964|gb|EKB86685.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808983|gb|EKF80234.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|414706676|emb|CCN28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304302|gb|EKV66449.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae VA360]
gi|426304864|gb|EKV66998.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae JHCK1]
gi|427540935|emb|CCM93048.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874275|gb|EMB09330.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
pneumoniae hvKP1]
Length = 207
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S +EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAAEAVEYGLVDSIL 203
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 122/205 (59%), Gaps = 17/205 (8%)
Query: 76 VITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
++ +IP EQ P D+ S L K+RI+ LG + L++A+ L+L+ E
Sbjct: 4 ILNQLIPIV----IEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESE 59
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D +K IY+YINS G G T AIYD M Y+KP + T+C+G A A LL A
Sbjct: 60 DPDKDIYMYINSPG--------GVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSA 111
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
GAKG R +LP++ IMI QP+G +GQATD+EI +E+ +K L + AKH G+ E+IE
Sbjct: 112 GAKGKRYSLPNARIMIHQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIE 171
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVLY 275
AD R + S EA EYG+IDKV+Y
Sbjct: 172 ADTERDYFMSAEEAKEYGLIDKVIY 196
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D EK IY+YINS G G
Sbjct: 24 DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYMYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A AA+LL AGAKG R +LP S IMI QP+G I
Sbjct: 76 VTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRIMIHQPMGGIS 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+K +K L ++ AKH G+ ++E D+ R + S EA+EYGI+DKV+
Sbjct: 136 GQATDIIIHAEEIKRIKHMLNEIIAKHTGQPLSKVEQDVERDYFMSAYEAMEYGIVDKVI 195
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 121/203 (59%), Gaps = 9/203 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
I +IP T + D+ S L K RIV+LG S++ LI+A+FL+L+ ED +K
Sbjct: 8 IAQLIPMVVEQTGRTERAYDIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKD 67
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G GY T AI+D M Y+KP + T+C+G A A LL G KG
Sbjct: 68 IYLYINSPG--------GYITAGMAIFDTMNYIKPDVATICMGQASSMGAFLLAGGKKGK 119
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R+ALP+S IMI QP+G EGQA+D++I E+ ++ +L KL AK G+ ++E D R
Sbjct: 120 RSALPNSRIMIHQPMGGAEGQASDIKIQADEIIRLRGKLNKLLAKQTGQKISKVEKDSDR 179
Query: 256 PKYFSPSEAVEYGIIDKVLYTEK 278
+ S EA +YGIID VL + K
Sbjct: 180 NYFMSAVEAKKYGIIDTVLESRK 202
>gi|412990287|emb|CCO19605.1| ATP-dependent Clp protease-like protein [Bathycoccus prasinos]
Length = 296
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LY+QY D K YLYINSTG T+ GE +G+ETEA AIY
Sbjct: 98 RIVYIGMPLVPAVTELIVSELLYMQYTDPGKACYLYINSTGCTRADGEVVGFETEATAIY 157
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QATDV 220
D M Y+ ++T+ G A G+A +LL AG KG R P +T M+ QP G Q T++
Sbjct: 158 DTMKYIGNEVYTVGTGVAIGQACVLLSAGQKGKRFMTPHATAMLHQPKVPSTGQQQTTEL 217
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+I KE+ + K ++K+ A+ G+T E+I+ DI+RP Y + A+EYG++DK++
Sbjct: 218 QIKWKEVLDQKKSMLKILAETTGQTAEKIDKDIQRPLYLTAQAAIEYGLVDKIV 271
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 24 DIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP + IMI QP+G +
Sbjct: 76 VTAGLAIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALPHARIMIHQPLGGFQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L ++ AKH + E++E D R + S EA EYG+IDKVL
Sbjct: 136 GQATDIEIHAKEILRLKRMLNEILAKHTRQPVEKVEQDTERDYFMSAEEAKEYGLIDKVL 195
>gi|378578414|ref|ZP_09827089.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
gi|378768262|ref|YP_005196733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|386080397|ref|YP_005993922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|354989578|gb|AER33702.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis PA13]
gi|365187746|emb|CCF10696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea
ananatis LMG 5342]
gi|377818694|gb|EHU01775.1| ATP-dependent Clp protease proteolytic subunit [Pantoea stewartii
subsp. stewartii DC283]
Length = 207
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI QP+G +
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +KA+L +L KH G++ E++E D R + SEA YGIID++
Sbjct: 133 GQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEI 191
>gi|383784111|ref|YP_005468680.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083023|dbj|BAM06550.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
ferrooxidans C2-3]
Length = 200
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 9/204 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T+ + D+ S L K RI++LG +V L++A+ L+L+ ED K I
Sbjct: 1 MLIPMVVEHTSRGERSYDIYSRLLKERIIFLGTPIDDNVANLVIAQLLFLESEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T FAIYD M Y+KP + T+CVG A A LL AGAKG R
Sbjct: 61 IYINSPG--------GVVTAGFAIYDTMQYIKPDVSTICVGQAASMGAFLLAAGAKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ +MI QP+G +GQATD+ I KE+ +K+ L +L A H G+ ++IE D R
Sbjct: 113 ALPNARVMIHQPLGGFQGQATDIAIHAKEILKMKSHLNELLAHHTGQALQRIEQDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEKSPE 281
+ S E+ +YG++DKV+ + E
Sbjct: 173 FLSADESKDYGLVDKVMSSHGLTE 196
>gi|242240292|ref|YP_002988473.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dickeya
dadantii Ech703]
gi|242132349|gb|ACS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech703]
Length = 207
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KQTPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH G++ +
Sbjct: 118 TAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDI 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S EAVEYG++D VL
Sbjct: 178 IERDTERDRFLSAGEAVEYGLVDSVL 203
>gi|410462600|ref|ZP_11316168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984260|gb|EKO40581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 202
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 114/187 (60%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI QP G +
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATGLRYALPHSRIMIHQPSGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE + + L ++ AKH G++ E+I+ D R + S EAV YG+IDKVL
Sbjct: 131 GQATDIEIHAKETRRTRETLNEIMAKHTGQSMERIQVDTERDNFMSAEEAVAYGLIDKVL 190
Query: 275 YTEKSPE 281
+ + E
Sbjct: 191 TSRERLE 197
>gi|304395499|ref|ZP_07377382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|440758262|ref|ZP_20937433.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
gi|304356793|gb|EFM21157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|436428046|gb|ELP25712.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
299R]
Length = 207
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQA+D+EI +E+ VK + +L A+H GKT E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|291616549|ref|YP_003519291.1| ClpP [Pantoea ananatis LMG 20103]
gi|386014922|ref|YP_005933199.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
gi|291151579|gb|ADD76163.1| ClpP [Pantoea ananatis LMG 20103]
gi|327392981|dbj|BAK10403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
Length = 218
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 21 TAPHNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 77
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 78 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 129
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ E+I
Sbjct: 130 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEI 189
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 190 ERDTERDRFLSASEAVEYGLVDSIL 214
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 117/201 (58%), Gaps = 9/201 (4%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP T + D+ S L K+RI++LG + +++A+ L+L E+ ++ IYL
Sbjct: 3 VIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G GY + AIYD M Y+K + TLCVG A AALLL GAKG R+A
Sbjct: 63 YINSPG--------GYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSA 114
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LP S IM+ QP G GQA+D+ I KE+ +K L LY KH GK+ EQI+ D R Y
Sbjct: 115 LPHSRIMMHQPTGGATGQASDIAIQAKEVLKLKEVLNGLYTKHTGKSMEQIQKDTERDLY 174
Query: 259 FSPSEAVEYGIIDKVLYTEKS 279
+ EA YGIID V+ E+S
Sbjct: 175 MTAEEAQTYGIIDSVISIERS 195
>gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
Length = 207
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 14/214 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
+ QIE+D R ++ S EAVEYG++D +L K
Sbjct: 174 SLAQIESDTERDRFLSAPEAVEYGLVDSILTHRK 207
>gi|255542730|ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223548389|gb|EEF49880.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE +YLQ+ D ++PIYLYINSTGTT+ GE +G ETE FAIY
Sbjct: 123 RIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIY 182
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QATDV 220
D M +K I T+ VG A G+A LLL AG KG R +P + MI+QP G A+DV
Sbjct: 183 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPKVPSSGLMAASDV 242
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
I KE + LV+L AKH + E + ++RP Y A E+G+IDK+L+
Sbjct: 243 LIRAKEAVTNRDTLVELLAKHTENSVETVANAMKRPFYMDSRRAKEFGVIDKILW 297
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 120/198 (60%), Gaps = 11/198 (5%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G T AIYD M Y+ P+ TLC+G A A+LLL AG KG R
Sbjct: 61 YMYINSPG--------GVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMR 112
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
+LP S I+I QP+G +GQA+D+ I KE+ +K EL + A+H G++ E+I AD R
Sbjct: 113 YSLPHSRILIHQPLGGAQGQASDISIHAKEILRMKDELNGIMARHTGQSIEKITADTDRD 172
Query: 257 KYFSPSEAVEYGIIDKVL 274
+ S EA+EYG+IDKV+
Sbjct: 173 YFMSSEEALEYGLIDKVM 190
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +I+A+ L+L E+ ++ IYLY+NS G GY
Sbjct: 19 DVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYLYLNSPG--------GY 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+K + TLC+G A AALLL GAKG R+ALP S IM+ QP G
Sbjct: 71 VSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMMHQPTGGAT 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ +K L LYAKH GK+ E+++ D R Y +P EA +YGIID V+
Sbjct: 131 GQASDIAIQAKEVLKLKQVLNGLYAKHTGKSVEEVQKDTERDLYMTPEEAQKYGIIDSVI 190
Query: 275 YTEKS 279
E+
Sbjct: 191 SIERQ 195
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC G A A LL AGAKG R ALP + IMI QP+G
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGAR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +KA L + A+H G++ E++ AD R + S EA EYG+IDKVL
Sbjct: 131 GQATDIQIQAEEILRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLIDKVL 190
>gi|357112271|ref|XP_003557933.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 3, chloroplastic-like [Brachypodium distachyon]
Length = 338
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 116/179 (64%), Gaps = 7/179 (3%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTELI+A+ +YL + + +P Y+YINSTGT + GE +G ETE FA
Sbjct: 134 HGRIVYIGMPLVPAVTELIVAQLMYLDWTNSSEPAYIYINSTGTARDDGEPVGMETEGFA 193
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG----Q 216
IYD M +K I TLC+G A G A L+L AG KG R P + +I+QP RI Q
Sbjct: 194 IYDAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKALIQQP--RIPSYGMMQ 251
Query: 217 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
A+DV I KE+ + + LVKL A+H G PE+I+ +R P Y +A E+G+IDK+L+
Sbjct: 252 ASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILW 310
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV LG V LI+A+ L+L+ +D +K IYLYINS G G
Sbjct: 26 DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AGA G R ALP S IMI QP+G I+
Sbjct: 78 VTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMIHQPLGGIQ 137
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+K +K L+ + AKH G+ ++I DI R + SP EA +YG+IDKV+
Sbjct: 138 GQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEAKDYGLIDKVI 197
>gi|156541196|ref|XP_001599209.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Nasonia vitripennis]
Length = 234
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ L++A+ L+LQ E +KPI+LYINS G G
Sbjct: 41 DIYSRLLKERIICLMGPITDDISSLVVAQLLFLQSESSKKPIHLYINSPG--------GV 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AGA G R ALP++ IMI QP G ++
Sbjct: 93 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAPGMRHALPNARIMIHQPSGGVQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K ++ LYAKH G ++IE ++ R K+ +P EA E+GIIDKVL
Sbjct: 153 GQATDIRIQAEEILKLKGQINALYAKHTGLDIQRIENNMERDKFMTPIEAKEFGIIDKVL 212
>gi|224284192|gb|ACN39832.1| unknown [Picea sitchensis]
Length = 327
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
+RI+++GM VP+VTEL++AEFLYLQ+ D +P Y+YINSTGT++ GE + ETE FA
Sbjct: 113 NSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFA 172
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ--AT 218
IYD M +K + T+ G A G+A LLL AG KG R LP + ++++QP GQ A
Sbjct: 173 IYDTMMQMKNEMHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQPRLPATGQMPAI 232
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ + + VKL AKH G E + + RP Y P +AVE+G+ DK+L+
Sbjct: 233 DVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFYMFPRQAVEFGVADKILW 289
>gi|197284027|ref|YP_002149899.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|226329068|ref|ZP_03804586.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198]
gi|227358102|ref|ZP_03842444.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|425066920|ref|ZP_18470036.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
gi|425073647|ref|ZP_18476753.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|226706465|sp|B4EU53.1|CLPP_PROMH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|194681514|emb|CAR40393.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|225202254|gb|EEG84608.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Proteus
penneri ATCC 35198]
gi|227161837|gb|EEI46869.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|404594918|gb|EKA95473.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW4]
gi|404601591|gb|EKB01983.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
WGLW6]
Length = 207
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 127/208 (61%), Gaps = 12/208 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 12 PNMALVPMVIEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I LYINS G G T +IYD M Y+K + T+C+G A A LL AG
Sbjct: 69 PEKDINLYINSPG--------GVITAGMSIYDTMQYIKADVSTICMGQACSMGAFLLSAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD++I +E+ VK+ + +L A+H GK+ E+IE
Sbjct: 121 AKGKRICLPNSRVMIHQPLGGYQGQATDIQIHAQEILKVKSRMNELMAQHTGKSIEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
D R ++ S +EA+EYG++DKV YT++S
Sbjct: 181 DTERDRFLSANEALEYGLVDKV-YTQRS 207
>gi|354722308|ref|ZP_09036523.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter mori
LMG 25706]
Length = 207
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
EQIE D R ++ S EAVEYG++D VL
Sbjct: 174 PLEQIERDTERDRFLSAPEAVEYGLVDSVL 203
>gi|242035789|ref|XP_002465289.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
gi|241919143|gb|EER92287.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
Length = 339
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 7/179 (3%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFA 160
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FA
Sbjct: 135 HGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFA 194
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG----Q 216
IYD M + I TLC+G A G A L+L AG KG R P + MI+QP RI Q
Sbjct: 195 IYDAMMRMNTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQP--RIPSYGMMQ 252
Query: 217 ATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
A+DV I KE+ + + LVKL A+H G PE+I+ +R P Y +A E+G+IDK+L+
Sbjct: 253 ASDVVIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKILW 311
>gi|288549991|ref|ZP_05968896.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
gi|288316903|gb|EFC55841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
Length = 194
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VKA + +L A+H G++ EQIE D R ++ S EAVEYG++D VL
Sbjct: 131 GQATDIEIHAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSVL 190
>gi|145343690|ref|XP_001416446.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576671|gb|ABO94739.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 120/181 (66%), Gaps = 7/181 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTELI++E LYLQY D +KP Y+YINSTG T+ GE +G+ETEA AI+
Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI----EGQAT 218
D M Y+ I+T+ G A G+A +LL AG KG R P +T M+ QP R+ E QAT
Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQP--RVPSTGERQAT 225
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
++ I +E K L+ + ++ G + +++ D++RP Y + +A+EYGI+DKV+ E
Sbjct: 226 ELNIKWRETLAQKKSLLDILSQTTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVIERES 285
Query: 279 S 279
+
Sbjct: 286 N 286
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI QP+G +
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +KA+L +L KH G++ E++E D R + SEA YGIID++
Sbjct: 133 GQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEI 191
>gi|398792058|ref|ZP_10552756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
gi|398214190|gb|EJN00773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
YR343]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 123/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|423118963|ref|ZP_17106647.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
gi|376399609|gb|EHT12223.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella oxytoca
10-5246]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ QIE D R ++ S SEAVEYG++D +L
Sbjct: 174 SLAQIENDTERDRFLSASEAVEYGLVDSIL 203
>gi|227328849|ref|ZP_03832873.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + L++A+ L+L+
Sbjct: 9 RQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDYMANLVVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA++ +L AKH G+ E
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S SEAV+YG++D V
Sbjct: 178 IERDTERDRFLSASEAVDYGLVDSVF 203
>gi|296085762|emb|CBI29573.3| unnamed protein product [Vitis vinifera]
Length = 91
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 85/91 (93%)
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
MIKQPI R +GQATD+++ARKE+KNVKAELVKLYAKH GK+PE+IEADIRRPKYFSPSEA
Sbjct: 1 MIKQPIARFQGQATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEA 60
Query: 265 VEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
VEYGIIDKVLY E+S ED GVV+DLKKAQLI
Sbjct: 61 VEYGIIDKVLYNERSSEDRGVVADLKKAQLI 91
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 113/182 (62%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K +L +L AK+ GKT EQI D R Y S EAV YG+IDK
Sbjct: 130 LKGQATDISIHANELLKIKDKLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDK 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|322834046|ref|YP_004214073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
gi|383191242|ref|YP_005201370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|384259224|ref|YP_005403158.1| ATP-dependent Clp protease proteolytic subunit [Rahnella aquatilis
HX2]
gi|321169247|gb|ADW74946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
gi|371589500|gb|AEX53230.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|380755200|gb|AFE59591.1| ATP-dependent Clp protease proteolytic subunit [Rahnella aquatilis
HX2]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
A+G R LP+S +MI QP+G +GQATD+EI KE+ VK+ + +L AKH GK+ E+IE
Sbjct: 121 AEGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAV+YG++D V
Sbjct: 181 DTERDRFLSADEAVQYGLVDSVF 203
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KQAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH G+ E
Sbjct: 118 TAGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEA 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S +EAV+YG++D VL
Sbjct: 178 IERDTERDRFLSAAEAVDYGLVDSVL 203
>gi|270263570|ref|ZP_06191839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333925889|ref|YP_004499468.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333930842|ref|YP_004504420.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|386327713|ref|YP_006023883.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|421781988|ref|ZP_16218448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
gi|270042454|gb|EFA15549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|333472449|gb|AEF44159.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|333489949|gb|AEF49111.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333960046|gb|AEG26819.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|407755862|gb|EKF65985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
plymuthica A30]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+T EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQTLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + EAVEYG++D +L
Sbjct: 181 DTERDRFMTAEEAVEYGLVDGIL 203
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 122/206 (59%), Gaps = 17/206 (8%)
Query: 74 SPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S VI ++P EQ P D+ S L ++RIV LG V LI+A+ L+L+
Sbjct: 2 SKVIDQLVPIV----IEQTPRGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLE 57
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
+D EK IY+YINS G G T AIYD M Y+KP + T+C+G A A+LL
Sbjct: 58 AQDPEKDIYMYINSPG--------GSVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLL 109
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGA G R ALP S IMI QP+G I GQATD+ I +E+K +K L ++ +KH G+ E+
Sbjct: 110 AAGAPGKRYALPHSRIMIHQPLGGITGQATDIIIHAEEIKRIKHMLNEILSKHTGQPLER 169
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D+ R + S EA EYGI+D+V+
Sbjct: 170 IERDVERDYFMSSEEAREYGIVDRVI 195
>gi|334123167|ref|ZP_08497196.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
gi|449472613|ref|XP_004153647.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Cucumis sativus]
gi|333391041|gb|EGK62164.1| ATP-dependent Clp protease, protease subunit [Enterobacter
hormaechei ATCC 49162]
Length = 207
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 PLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|332160749|ref|YP_004297326.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309498|ref|YP_006005554.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242377|ref|ZP_12868889.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550574|ref|ZP_20506618.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
gi|318604628|emb|CBY26126.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664979|gb|ADZ41623.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859950|emb|CBX70279.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica W22703]
gi|351778211|gb|EHB20378.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789709|emb|CCO69658.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica IP 10393]
Length = 207
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VK+ + +L AKH GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAV+YG++D V
Sbjct: 181 DTERDRFLSADEAVKYGLVDSVF 203
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC G A A LL AGAKG R ALP + IMI QP+G
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARIMIHQPLGGAR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +KA L A+H G++ E++ AD R + S EA EYG+IDKVL
Sbjct: 131 GQATDIQIQAEEILRLKATLTHRMAEHSGQSYEKVLADTERDNFMSAEEAAEYGLIDKVL 190
>gi|308185908|ref|YP_003930039.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
gi|372276432|ref|ZP_09512468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
SL1_M5]
gi|390435716|ref|ZP_10224254.1| ATP-dependent Clp protease proteolytic subunit [Pantoea agglomerans
IG1]
gi|308056418|gb|ADO08590.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
Length = 207
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQA+D+EI +E+ VK + +L A+H GKT E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S +EAVEYG++D +L
Sbjct: 179 ERDTERDRFLSANEAVEYGLVDSIL 203
>gi|283784263|ref|YP_003364128.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
gi|448236261|ref|YP_001571487.2| ClpP-like protease [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|282947717|emb|CBG87272.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
Length = 207
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|381405442|ref|ZP_09930126.1| ClpP [Pantoea sp. Sc1]
gi|380738641|gb|EIB99704.1| ClpP [Pantoea sp. Sc1]
Length = 207
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHNALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQA+D+EI +E+ VK + +L A+H GK+ E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKSLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SEAVEYG++D +L
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSIL 203
>gi|436653600|ref|ZP_20516817.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435025338|gb|ELM15494.1| ATP-dependent Clp protease, proteolytic subunit ClpP, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
Length = 225
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 30 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 86
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 87 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 138
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 139 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 198
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 199 DTERDRFLSAPEAVEYGLVDSIL 221
>gi|16759428|ref|NP_455045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763829|ref|NP_459444.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142800|ref|NP_806142.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|162139608|ref|YP_215477.2| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|168237562|ref|ZP_02662620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261116|ref|ZP_02683089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465541|ref|ZP_02699423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194443946|ref|YP_002039691.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451357|ref|YP_002044483.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194734455|ref|YP_002113479.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|204930575|ref|ZP_03221505.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207855928|ref|YP_002242579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025962|ref|ZP_03340409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213419494|ref|ZP_03352560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425858|ref|ZP_03358608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646005|ref|ZP_03376058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853068|ref|ZP_03382600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238911421|ref|ZP_04655258.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|339998420|ref|YP_004729303.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|378443952|ref|YP_005231584.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378448785|ref|YP_005236144.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698411|ref|YP_005180368.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378983053|ref|YP_005246208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378987850|ref|YP_005251014.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|409248894|ref|YP_006884732.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|416424704|ref|ZP_11691885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432829|ref|ZP_11696434.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440099|ref|ZP_11700680.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444542|ref|ZP_11703775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453748|ref|ZP_11709822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458586|ref|ZP_11713105.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465622|ref|ZP_11716944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473280|ref|ZP_11719747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484368|ref|ZP_11724164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501557|ref|ZP_11732147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510475|ref|ZP_11737073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520600|ref|ZP_11740312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526651|ref|ZP_11742556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536139|ref|ZP_11748206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542339|ref|ZP_11751509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552363|ref|ZP_11757079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557282|ref|ZP_11759411.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573530|ref|ZP_11767876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576687|ref|ZP_11769269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583721|ref|ZP_11773477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595069|ref|ZP_11780883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596606|ref|ZP_11781498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605755|ref|ZP_11787187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614720|ref|ZP_11792972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623397|ref|ZP_11797372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634045|ref|ZP_11802326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639007|ref|ZP_11804306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648501|ref|ZP_11809146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653401|ref|ZP_11811845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670923|ref|ZP_11820412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673586|ref|ZP_11820909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691334|ref|ZP_11826156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706818|ref|ZP_11832007.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713232|ref|ZP_11836874.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719437|ref|ZP_11841293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723573|ref|ZP_11844239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734155|ref|ZP_11850810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740075|ref|ZP_11854163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745272|ref|ZP_11857204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757171|ref|ZP_11863001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764387|ref|ZP_11867991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766796|ref|ZP_11869412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|418485272|ref|ZP_13054256.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490798|ref|ZP_13057334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493157|ref|ZP_13059625.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498099|ref|ZP_13064514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504393|ref|ZP_13070751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507976|ref|ZP_13074284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418525614|ref|ZP_13091594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763194|ref|ZP_13319318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766728|ref|ZP_13322800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771899|ref|ZP_13327905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774850|ref|ZP_13330811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781197|ref|ZP_13337082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784659|ref|ZP_13340496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791369|ref|ZP_13347132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793869|ref|ZP_13349595.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418804741|ref|ZP_13360345.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807601|ref|ZP_13363159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812139|ref|ZP_13367663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815498|ref|ZP_13370999.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821321|ref|ZP_13376746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418825219|ref|ZP_13380527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418831776|ref|ZP_13386726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835778|ref|ZP_13390669.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838762|ref|ZP_13393604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844394|ref|ZP_13399186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848964|ref|ZP_13403699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853324|ref|ZP_13408017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860806|ref|ZP_13415381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864289|ref|ZP_13418824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866312|ref|ZP_13420775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727608|ref|ZP_14254576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733911|ref|ZP_14260806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738879|ref|ZP_14265635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743018|ref|ZP_14269686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749564|ref|ZP_14276043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788921|ref|ZP_14314604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793963|ref|ZP_14319579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357762|ref|ZP_15808070.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421365243|ref|ZP_15815465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368981|ref|ZP_15819165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372429|ref|ZP_15822578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376040|ref|ZP_15826149.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421380610|ref|ZP_15830672.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421383974|ref|ZP_15834003.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421392475|ref|ZP_15842432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421396008|ref|ZP_15845940.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421398667|ref|ZP_15848572.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421405151|ref|ZP_15854986.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421407751|ref|ZP_15857558.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421412093|ref|ZP_15861856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419440|ref|ZP_15869132.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421423883|ref|ZP_15873534.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421425637|ref|ZP_15875272.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421429985|ref|ZP_15879579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436812|ref|ZP_15886338.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439185|ref|ZP_15888676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445860|ref|ZP_15895281.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421451188|ref|ZP_15900554.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|421572546|ref|ZP_16018192.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421577455|ref|ZP_16023043.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421582044|ref|ZP_16027585.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421584557|ref|ZP_16030065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|421884328|ref|ZP_16315543.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422024583|ref|ZP_16371060.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422029606|ref|ZP_16375862.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427545785|ref|ZP_18926371.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427562133|ref|ZP_18931136.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427580636|ref|ZP_18935958.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427602844|ref|ZP_18940734.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427627512|ref|ZP_18945644.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427650793|ref|ZP_18950400.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427659813|ref|ZP_18955354.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427664926|ref|ZP_18960100.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|427698521|ref|ZP_18965034.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|436615597|ref|ZP_20514266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436797184|ref|ZP_20523130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|436810601|ref|ZP_20529639.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813651|ref|ZP_20531839.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831375|ref|ZP_20536043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849785|ref|ZP_20540922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856198|ref|ZP_20545303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863183|ref|ZP_20549726.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871659|ref|ZP_20554833.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878810|ref|ZP_20559229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886925|ref|ZP_20563331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894408|ref|ZP_20567886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904534|ref|ZP_20574551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909989|ref|ZP_20576574.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918242|ref|ZP_20581413.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925537|ref|ZP_20585969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934282|ref|ZP_20590286.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941290|ref|ZP_20594850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949280|ref|ZP_20599294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959668|ref|ZP_20603865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975115|ref|ZP_20611391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987194|ref|ZP_20615838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999731|ref|ZP_20620304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010049|ref|ZP_20624029.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018154|ref|ZP_20626646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437035561|ref|ZP_20633487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046589|ref|ZP_20638405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049340|ref|ZP_20639960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056846|ref|ZP_20644214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437065298|ref|ZP_20648983.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078922|ref|ZP_20656416.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437081946|ref|ZP_20658021.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437089970|ref|ZP_20662542.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437117164|ref|ZP_20669784.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122541|ref|ZP_20672383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132642|ref|ZP_20678092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137749|ref|ZP_20680544.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437149062|ref|ZP_20687935.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151979|ref|ZP_20689650.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437160927|ref|ZP_20695000.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172784|ref|ZP_20701307.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437176839|ref|ZP_20703643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437188248|ref|ZP_20710252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437259709|ref|ZP_20717229.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437272720|ref|ZP_20724470.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437274738|ref|ZP_20725430.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437288358|ref|ZP_20730692.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437307007|ref|ZP_20734649.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437323566|ref|ZP_20739300.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437338518|ref|ZP_20743723.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437353359|ref|ZP_20747850.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437456275|ref|ZP_20760394.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437470002|ref|ZP_20765017.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437485279|ref|ZP_20769391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437499044|ref|ZP_20773853.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437513523|ref|ZP_20777501.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437531377|ref|ZP_20780747.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437554751|ref|ZP_20784523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571697|ref|ZP_20788806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437602362|ref|ZP_20798369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625360|ref|ZP_20805445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632904|ref|ZP_20806597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658474|ref|ZP_20811681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672066|ref|ZP_20816065.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437694788|ref|ZP_20821863.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437710351|ref|ZP_20826456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437726124|ref|ZP_20829929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437763921|ref|ZP_20834985.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437811612|ref|ZP_20841204.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437833273|ref|ZP_20844621.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438047872|ref|ZP_20856088.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438091449|ref|ZP_20860960.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438105780|ref|ZP_20866398.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438114455|ref|ZP_20870071.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438147683|ref|ZP_20876176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|440761974|ref|ZP_20941040.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440768721|ref|ZP_20947686.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440772487|ref|ZP_20951391.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445144197|ref|ZP_21386946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150702|ref|ZP_21389848.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172332|ref|ZP_21396423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214950|ref|ZP_21401734.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232595|ref|ZP_21406108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445246809|ref|ZP_21408349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445337409|ref|ZP_21415966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445343522|ref|ZP_21416991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354600|ref|ZP_21421499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|449785023|ref|YP_002145429.2| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|452121291|ref|YP_007471539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|60391923|sp|P0A1D7.1|CLPP_SALTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|60391924|sp|P0A1D8.1|CLPP_SALTI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|67460140|sp|Q57SB5.2|CLPP_SALCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706468|sp|B5QTJ6.1|CLPP_SALEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706469|sp|B4T9E3.1|CLPP_SALHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706470|sp|B4SWU1.1|CLPP_SALNS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706472|sp|B4TMC6.1|CLPP_SALSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289858|pir||AC0558 ATP-dependent clp protease proteolytic chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|7594816|dbj|BAA94668.1| serine protease subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16418955|gb|AAL19403.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16501719|emb|CAD08907.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138432|gb|AAO70002.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|194402609|gb|ACF62831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409661|gb|ACF69880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194709957|gb|ACF89178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631923|gb|EDX50443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197289522|gb|EDY28885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320509|gb|EDZ05712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205350070|gb|EDZ36701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707731|emb|CAR32016.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261245731|emb|CBG23528.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992163|gb|ACY87048.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157059|emb|CBW16543.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911481|dbj|BAJ35455.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320084722|emb|CBY94513.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322614726|gb|EFY11655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618832|gb|EFY15720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623539|gb|EFY20378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629162|gb|EFY25941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631883|gb|EFY28637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637380|gb|EFY34082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642065|gb|EFY38675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647884|gb|EFY44359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652562|gb|EFY48916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653276|gb|EFY49609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660575|gb|EFY56811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664727|gb|EFY60920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669220|gb|EFY65370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670765|gb|EFY66898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678996|gb|EFY75051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682025|gb|EFY78050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685146|gb|EFY81143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192960|gb|EFZ78183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196958|gb|EFZ82100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203943|gb|EFZ88960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214175|gb|EFZ98933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214501|gb|EFZ99252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223058|gb|EGA07401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227007|gb|EGA11188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230175|gb|EGA14295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233913|gb|EGA18002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238393|gb|EGA22451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244080|gb|EGA28089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246241|gb|EGA30224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251867|gb|EGA35730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257864|gb|EGA41543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261123|gb|EGA44715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264947|gb|EGA48446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272510|gb|EGA55917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987397|gb|AEF06380.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|339511781|emb|CCC29490.1| ATP-dependent clp protease proteolytic subunit [Salmonella bongori
NCTC 12419]
gi|363549144|gb|EHL33501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554589|gb|EHL38824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557703|gb|EHL41908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564589|gb|EHL48636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565245|gb|EHL49281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571797|gb|EHL55701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578796|gb|EHL62598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056250|gb|EHN20576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065085|gb|EHN29280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065332|gb|EHN29522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071235|gb|EHN35335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073876|gb|EHN37940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080282|gb|EHN44254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366829495|gb|EHN56371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206383|gb|EHP19887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986042|emb|CCF87816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|381299098|gb|EIC40172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300719|gb|EIC41777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301190|gb|EIC42246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310720|gb|EIC51546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312570|gb|EIC53367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|392616053|gb|EIW98488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616387|gb|EIW98820.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733474|gb|EIZ90676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734438|gb|EIZ91620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736739|gb|EIZ93901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747924|gb|EJA04915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750050|gb|EJA07026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754190|gb|EJA11109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755458|gb|EJA12368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763549|gb|EJA20356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392769770|gb|EJA26499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776879|gb|EJA33565.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778864|gb|EJA35535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790916|gb|EJA47409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791950|gb|EJA48418.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798673|gb|EJA54944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803053|gb|EJA59254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814588|gb|EJA70539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815214|gb|EJA71158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392816913|gb|EJA72832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392822311|gb|EJA78123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826190|gb|EJA81923.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827372|gb|EJA83081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831550|gb|EJA87183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840222|gb|EJA95758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980754|gb|EJH89977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983276|gb|EJH92469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989999|gb|EJH99131.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396000079|gb|EJI09094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003267|gb|EJI12255.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396003659|gb|EJI12646.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396008036|gb|EJI16971.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396011052|gb|EJI19963.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396020536|gb|EJI29377.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396024462|gb|EJI33248.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396029683|gb|EJI38419.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396030457|gb|EJI39191.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396035580|gb|EJI44252.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396035931|gb|EJI44602.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396044341|gb|EJI52938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052132|gb|EJI60640.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396056908|gb|EJI65381.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396057302|gb|EJI65774.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063943|gb|EJI72331.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396064295|gb|EJI72682.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396071391|gb|EJI79716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515481|gb|EJW22895.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402516043|gb|EJW23456.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402516372|gb|EJW23783.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402531075|gb|EJW38288.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|414023307|gb|EKT06741.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414023848|gb|EKT07262.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414025324|gb|EKT08654.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414037188|gb|EKT19972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414038658|gb|EKT21365.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414042387|gb|EKT24925.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414051734|gb|EKT33818.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414053183|gb|EKT35195.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414057649|gb|EKT39402.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414061847|gb|EKT43224.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|414067321|gb|EKT47699.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm5]
gi|434938414|gb|ELL45392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pullorum str. ATCC
9120]
gi|434961256|gb|ELL54574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS44]
gi|434965093|gb|ELL58056.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434967686|gb|ELL60487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975159|gb|ELL67469.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982332|gb|ELL74155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988362|gb|ELL79961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991631|gb|ELL83119.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997710|gb|ELL88949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000874|gb|ELL91996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007486|gb|ELL98339.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011457|gb|ELM02177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017056|gb|ELM07564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018222|gb|ELM08697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028362|gb|ELM18441.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030974|gb|ELM20963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039930|gb|ELM29699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041422|gb|ELM31164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045121|gb|ELM34766.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050066|gb|ELM39571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053978|gb|ELM43414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054333|gb|ELM43768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059775|gb|ELM49050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060272|gb|ELM49542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066949|gb|ELM56020.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074928|gb|ELM63751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078059|gb|ELM66803.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081746|gb|ELM70387.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435096364|gb|ELM84636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096878|gb|ELM85140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099946|gb|ELM88137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101278|gb|ELM89432.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111114|gb|ELM99019.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113536|gb|ELN01382.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435114988|gb|ELN02778.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435122189|gb|ELN09711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123367|gb|ELN10860.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130871|gb|ELN18099.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435134383|gb|ELN21511.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435143452|gb|ELN30318.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435143861|gb|ELN30715.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435146440|gb|ELN33233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155564|gb|ELN42108.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435156168|gb|ELN42670.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435165097|gb|ELN51157.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435168052|gb|ELN53905.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435175816|gb|ELN61219.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435183758|gb|ELN68719.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435186995|gb|ELN71808.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435194617|gb|ELN79045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435195909|gb|ELN80265.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435206982|gb|ELN90474.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435212164|gb|ELN95189.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435214887|gb|ELN97635.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435216454|gb|ELN98929.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435223967|gb|ELO05951.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435230160|gb|ELO11494.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435243443|gb|ELO23701.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435243627|gb|ELO23884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248150|gb|ELO28071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435253179|gb|ELO32667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260050|gb|ELO39263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270473|gb|ELO48969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278368|gb|ELO56239.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435279708|gb|ELO57452.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435282538|gb|ELO60153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289124|gb|ELO66114.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435292074|gb|ELO68863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297966|gb|ELO74223.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435302259|gb|ELO78234.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435308367|gb|ELO83330.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435315858|gb|ELO89078.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435319476|gb|ELO92303.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435321469|gb|ELO93884.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435328854|gb|ELP00312.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|436416440|gb|ELP14346.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436418436|gb|ELP16320.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436424266|gb|ELP22049.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|444847337|gb|ELX72487.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444856539|gb|ELX81566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859546|gb|ELX84490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860439|gb|ELX85354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862183|gb|ELX87043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444873409|gb|ELX97706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444881326|gb|ELY05370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887690|gb|ELY11383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|444890253|gb|ELY13606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|451910295|gb|AGF82101.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 207
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|423138926|ref|ZP_17126564.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|160865722|gb|ABX22345.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
gi|379051480|gb|EHY69371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 243
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 44 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 97
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 98 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 149
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 150 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 209
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 210 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 239
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI QP+G +
Sbjct: 73 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA K + ++ L + A+ G+ E+I+ D R + S EAVEYG+IDKV+
Sbjct: 133 GQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 192
Query: 275 YTEKS 279
+E S
Sbjct: 193 TSEPS 197
>gi|56414396|ref|YP_151471.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363316|ref|YP_002142953.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|67460194|sp|Q5PFN4.1|CLPP_SALPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706471|sp|B5BD83.1|CLPP_SALPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56128653|gb|AAV78159.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094793|emb|CAR60326.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|418511864|ref|ZP_13078112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366084181|gb|EHN48092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|205351759|ref|YP_002225560.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|445132409|ref|ZP_21382196.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|205271540|emb|CAR36358.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|444849097|gb|ELX74214.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|375122544|ref|ZP_09767708.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|326626794|gb|EGE33137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
Length = 246
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 160 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 219
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 220 DTERDRFLSAPEAVEYGLVDSIL 242
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+LQ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI QP+G +
Sbjct: 71 ITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA K + ++ L + A+ G+ E+I+ D R + S EAVEYG+IDKV+
Sbjct: 131 GQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAVEYGLIDKVI 190
Query: 275 YTEKS 279
+E S
Sbjct: 191 TSEPS 195
>gi|437919283|ref|ZP_20850674.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435313922|gb|ELO87441.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
Length = 220
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 25 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 81
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 82 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 133
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 134 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 193
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 194 DTERDRFLSAPEAVEYGLVDSIL 216
>gi|157369338|ref|YP_001477327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
gi|157321102|gb|ABV40199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+T EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQTLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEK 278
D R ++ + EAVEYG++D +L K
Sbjct: 181 DTERDRFMTAEEAVEYGLVDGILTHRK 207
>gi|161615359|ref|YP_001589324.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197263975|ref|ZP_03164049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242637|ref|YP_002214402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390046|ref|ZP_03216657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205357179|ref|ZP_02345490.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205359635|ref|ZP_02830941.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224582286|ref|YP_002636084.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|375000176|ref|ZP_09724516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113375|ref|ZP_09758545.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117884|ref|ZP_09763051.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|378956164|ref|YP_005213651.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|417339754|ref|ZP_12121240.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417346821|ref|ZP_12126518.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417356090|ref|ZP_12131735.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417363848|ref|ZP_12136955.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|417371361|ref|ZP_12141962.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|417379165|ref|ZP_12147614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388734|ref|ZP_12152775.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417451305|ref|ZP_12163046.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504469|ref|ZP_12174140.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417525809|ref|ZP_12184553.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537133|ref|ZP_12190097.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|161364723|gb|ABX68491.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197242230|gb|EDY24850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197937153|gb|ACH74486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602491|gb|EDZ01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205323485|gb|EDZ11324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205344194|gb|EDZ30958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224466813|gb|ACN44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322713521|gb|EFZ05092.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|326622151|gb|EGE28496.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|353074864|gb|EHB40624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578891|gb|EHC40596.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353597181|gb|EHC53972.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353599186|gb|EHC55426.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353608251|gb|EHC61882.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353618300|gb|EHC69016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624600|gb|EHC73595.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353636599|gb|EHC82614.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651589|gb|EHC93636.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353668979|gb|EHD06016.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669715|gb|EHD06539.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357206775|gb|AET54821.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|357959981|gb|EHJ83999.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 243
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 157 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 216
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 217 DTERDRFLSAPEAVEYGLVDSIL 239
>gi|379699669|ref|YP_005241397.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323128768|gb|ADX16198.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 246
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 160 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 219
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 220 DTERDRFLSAPEAVEYGLVDSIL 242
>gi|418799553|ref|ZP_13355219.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392763871|gb|EJA20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
Length = 243
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 157 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 216
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 217 DTERDRFLSAPEAVEYGLVDSIL 239
>gi|194471774|ref|ZP_03077758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205357584|ref|ZP_02571531.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205358475|ref|ZP_02656494.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205358901|ref|ZP_02665206.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|289827300|ref|ZP_06545983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374978474|ref|ZP_09719816.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378960582|ref|YP_005218068.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|383495256|ref|YP_005395945.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|386590381|ref|YP_006086781.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417406175|ref|ZP_12157835.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417472928|ref|ZP_12168488.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417516426|ref|ZP_12179332.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|194458138|gb|EDX46977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197213461|gb|ACH50858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205331008|gb|EDZ17772.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205334088|gb|EDZ20852.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340153|gb|EDZ26917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|321226026|gb|EFX51077.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|353628150|gb|EHC76286.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353652681|gb|EHC94446.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353654323|gb|EHC95627.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|374354454|gb|AEZ46215.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|380462077|gb|AFD57480.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|383797425|gb|AFH44507.1| ATP-dependent Clp protease proteolytic [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 243
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 48 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 104
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 105 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 156
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 157 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 216
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 217 DTERDRFLSAPEAVEYGLVDSIL 239
>gi|417324522|ref|ZP_12110764.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353578760|gb|EHC40499.1| ATP-dependent Clp protease proteolytic subunit, partial [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 216
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 21 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 77
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 78 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 129
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 130 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 189
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 190 DTERDRFLSAPEAVEYGLVDSIL 212
>gi|62126693|gb|AAX64396.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F215 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 246
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 51 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 107
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 108 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 159
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 160 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIER 219
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 220 DTERDRFLSAPEAVEYGLVDSIL 242
>gi|251790648|ref|YP_003005369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
gi|247539269|gb|ACT07890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KLAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH G+ E
Sbjct: 118 TAGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEM 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S +EAV+YG++D VL
Sbjct: 178 IERDTERDRFLSAAEAVDYGLVDSVL 203
>gi|152968972|ref|YP_001334081.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262042473|ref|ZP_06015632.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011533|ref|ZP_08307119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|378977299|ref|YP_005225440.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402782116|ref|YP_006637662.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|421908672|ref|ZP_16338507.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918682|ref|ZP_16348197.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|150953821|gb|ABR75851.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259040177|gb|EEW41289.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534150|gb|EGF60785.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|364516710|gb|AEW59838.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|402542978|gb|AFQ67127.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|410117463|emb|CCM81132.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118949|emb|CCM90822.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
Length = 194
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S +EAVEYG++D +L
Sbjct: 131 GQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEAVEYGLVDSIL 190
>gi|428217239|ref|YP_007101704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427989021|gb|AFY69276.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 232
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ LI+++ L+L+ ED EK IYLYINS G G
Sbjct: 48 DIYSRLLRERIVFLGTQVDDNLASLIMSQLLFLEAEDPEKDIYLYINSPG--------GS 99
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + +V+P + T+C+G A A LL AGAKG R ALP++ IMI QP+G
Sbjct: 100 VTAGMAIYDTLQHVQPDVSTICMGLAASMGAFLLSAGAKGKRMALPNARIMIHQPLGGAR 159
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ K L +L A+H G++ ++IEAD R + SP+EA EYG+ID VL
Sbjct: 160 GQAVDIEIQAKEILYHKNTLNQLLAEHTGQSLDRIEADTERDFFMSPAEAKEYGLIDTVL 219
Query: 275 YTEKSP 280
+P
Sbjct: 220 VKPAAP 225
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 193
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDSEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L AK+ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|377576799|ref|ZP_09805783.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
gi|377542831|dbj|GAB50948.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
hermannii NBRC 105704]
Length = 207
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIFSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S +AVEYG++D +L
Sbjct: 181 DTERDRFLSADQAVEYGLVDSIL 203
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P++ +VI T + D+ S L K RIV+LG +V LI+++ L+L+ ED K
Sbjct: 2 PLVPIVI---EQTGRSERAYDIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G + AIYD M Y+KP + T C+G A A+LL AGAKG
Sbjct: 59 DIYLYINSPG--------GIVSSGLAIYDTMRYIKPDVVTTCMGQAASMGAVLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP + IMI QP+G EGQA+D+ IA E+ +K L ++ A GK E+IE D
Sbjct: 111 KRYALPHARIMIHQPLGGAEGQASDIAIAANEILRIKKVLNQILADATGKPLEKIEQDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKSPEDHG 284
R + S EA+EYG+IDKVL K +D G
Sbjct: 171 RNFFMSAEEALEYGLIDKVLSYRKEEKDDG 200
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4.1|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L K+ A+ G++ EQIE D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYGLIDEVM 190
Query: 275 YTEK 278
EK
Sbjct: 191 QPEK 194
>gi|271499597|ref|YP_003332622.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
gi|270343152|gb|ACZ75917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
Length = 207
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 9 KLAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDYMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH G++ +
Sbjct: 118 TAGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDV 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S +EAVEYG++D VL
Sbjct: 178 IERDTERDRFLSAAEAVEYGLVDSVL 203
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 118/202 (58%), Gaps = 11/202 (5%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G + AIYD M Y+ P+ TLC+G A ALLLGAG G R
Sbjct: 61 YMYINSPG--------GSVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMR 112
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
ALP S IMI QP+G +GQA+D+ I KE+ ++ EL ++ A H G+ E+I D R
Sbjct: 113 YALPHSRIMIHQPLGGAQGQASDIHIHAKEILRLRDELNEIMAGHTGQKLEKIREDTERD 172
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
+ S EA EYG+IDKV+ + K
Sbjct: 173 YFMSSKEAQEYGLIDKVMSSRK 194
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V +I+A+ L+L+ ED +K I +YINS G G
Sbjct: 21 DIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDPDKDINIYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPP+ T+CVG A A+LL AG KG R ALPSS IMI QP+G +
Sbjct: 73 VTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +KA+L +L KH G++ E++E D R + +EA YGI+D++
Sbjct: 133 GQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGATEAKAYGIVDEI 191
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 115/182 (63%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV++G + +V L++A+ LYL+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPG--------GL 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + Y+KP + T+CVG A AA+LL AG KG R AL S IM+ QPIG +
Sbjct: 72 VTAGLAIYDTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQPIGAFQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT+VEI KE+ ++ + ++ ++H G+ E+I+ D R Y S EA+EYGIIDK+L
Sbjct: 132 GQATEVEIQAKEILRLREIITEILSQHTGQPKEKIKQDTERDFYMSAEEALEYGIIDKIL 191
Query: 275 YT 276
T
Sbjct: 192 IT 193
>gi|386824461|ref|ZP_10111596.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
gi|386378672|gb|EIJ19474.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
Length = 207
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+T EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQTLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + EAVEYG++D +L
Sbjct: 181 DTERDRFMTAEEAVEYGLVDGIL 203
>gi|432532626|ref|ZP_19769626.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
gi|431063818|gb|ELD73032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE234]
Length = 207
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGHMNELMALHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + LI+A+ L+L+ ED +K ++LYINS G G
Sbjct: 19 DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDVHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y++P + T+CVG A A++LL AG KG R ALP S +MI QP+G +
Sbjct: 71 VSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ E+ ++ A H G+TPEQI D R + + EA YG+ID+V+
Sbjct: 131 GQATDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEAANYGLIDQVV 190
Query: 275 YTEKS 279
+ K+
Sbjct: 191 HQIKT 195
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +
Sbjct: 69 --------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
MI QP+G GQATD++I +E+ +K L + A+H G++ E++ AD R + S EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQSFEKVAADTERDNFMSAQEA 180
Query: 265 VEYGIIDKVL 274
+EYG+IDKVL
Sbjct: 181 MEYGLIDKVL 190
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG + L++A+ L+L+ ED +K I
Sbjct: 1 MLVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T IYD M Y+K PI T+CVG A AA+LL AG KG R
Sbjct: 61 LYINSPG--------GSVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRI 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S +M+ QP+G ++GQATD+EI KE+K ++ L ++ AKH + E++ D R
Sbjct: 113 ALPNSRVMLHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAKHTNQDIEKVARDTDRDF 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA+ YGI+DKV+
Sbjct: 173 FMSAEEALSYGIVDKVI 189
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 116/190 (61%), Gaps = 13/190 (6%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++LG V L++A+ L+L+ ED +K I YINS G
Sbjct: 9 EQSPRGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDITFYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M Y++ + TLC+G A ALLL +GA G R ALP+S I
Sbjct: 69 --------GSVTAGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRI 120
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
MI QP+G +GQATD++I +E+ ++ +L + A+H GK+ ++I+AD R + S +EA
Sbjct: 121 MIHQPMGGYQGQATDIDIHAREILRMRHDLNTILARHTGKSMKKIQADTERDNFMSATEA 180
Query: 265 VEYGIIDKVL 274
EYGIIDKVL
Sbjct: 181 CEYGIIDKVL 190
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 120/209 (57%), Gaps = 8/209 (3%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RS ++ ++ T + D+ S L K RI++LG V +I+A+ L+L+ ED
Sbjct: 7 RSVIMNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDP 66
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
EK I YINS G G T AIYD M Y+K I TLC+G A A+LL AG
Sbjct: 67 EKDITFYINSPG--------GSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGT 118
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G R ALP+S IMI QP+G +GQATD+EI KE+ ++ +L + A H GKT ++IE+D
Sbjct: 119 AGKRYALPNSRIMIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESD 178
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R + S EA +YG+ID+VL + E
Sbjct: 179 TERDNFMSSVEAQKYGLIDEVLVKREDVE 207
>gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
hominis ATCC BAA-381]
gi|166201810|sp|A7HZE8.1|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
hominis ATCC BAA-381]
Length = 195
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 121/202 (59%), Gaps = 11/202 (5%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +P+ T+ + D+ S L K+RIV L V ++A+ L+L+ ED +K IY
Sbjct: 1 MFVPYVIERTSRGERSYDIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ IMI QP+G +GQATD+EI KE+ +KA L K+ A++ G+ +IE D R
Sbjct: 113 ALPNARIMIHQPLGGAQGQATDIEITTKEILRIKATLNKILAENSGQKLSKIEKDTDRDF 172
Query: 258 YFSPSEAVEYGIIDKVLYTEKS 279
Y S EAV+YG+IDKVL EKS
Sbjct: 173 YMSAQEAVKYGLIDKVL--EKS 192
>gi|237707568|ref|ZP_04538049.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332281588|ref|ZP_08394001.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
gi|226898778|gb|EEH85037.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332103940|gb|EGJ07286.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
Length = 227
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 28 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 81
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 82 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 133
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 134 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 193
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 194 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 223
>gi|15800167|ref|NP_286179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15829745|ref|NP_308518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128422|ref|NP_414971.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|26246448|ref|NP_752487.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|30061939|ref|NP_836110.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 2457T]
gi|56479658|ref|NP_706331.2| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 301]
gi|74311012|ref|YP_309431.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
Ss046]
gi|82542925|ref|YP_406872.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
Sb227]
gi|82775656|ref|YP_402003.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae Sd197]
gi|91209511|ref|YP_539497.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UTI89]
gi|110640698|ref|YP_668426.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110804465|ref|YP_687985.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri 5
str. 8401]
gi|117622697|ref|YP_851610.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O1]
gi|157158299|ref|YP_001461624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E24377A]
gi|157159964|ref|YP_001457282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HS]
gi|168754541|ref|ZP_02779548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|168768391|ref|ZP_02793398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|168778128|ref|ZP_02803135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|168778929|ref|ZP_02803936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|168786287|ref|ZP_02811294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|170021190|ref|YP_001726144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ATCC 8739]
gi|170080023|ref|YP_001729343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. K-12 substr. DH10B]
gi|170683276|ref|YP_001742581.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SMS-3-5]
gi|187731303|ref|YP_001879148.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii CDC
3083-94]
gi|188492597|ref|ZP_02999867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|191174674|ref|ZP_03036146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|193064129|ref|ZP_03045213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|195938496|ref|ZP_03083878.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208809540|ref|ZP_03251877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208815859|ref|ZP_03257038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208822964|ref|ZP_03263282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209917654|ref|YP_002291738.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215485518|ref|YP_002327949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326412|ref|ZP_03442496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218549895|ref|YP_002383686.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ATCC 35469]
gi|218553004|ref|YP_002385917.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI1]
gi|218557347|ref|YP_002390260.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S88]
gi|218688301|ref|YP_002396513.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ED1a]
gi|218693900|ref|YP_002401567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
55989]
gi|218698651|ref|YP_002406280.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI39]
gi|218703721|ref|YP_002411240.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UMN026]
gi|222155227|ref|YP_002555366.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227884552|ref|ZP_04002357.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238899725|ref|YP_002925521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BW2952]
gi|251783945|ref|YP_002998249.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253774574|ref|YP_003037405.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160506|ref|YP_003043614.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|254287310|ref|YP_003053058.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254791621|ref|YP_003076458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842638|ref|YP_003220416.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853660|ref|YP_003227551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866598|ref|YP_003233000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|261223919|ref|ZP_05938200.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. FRIK2000]
gi|261256367|ref|ZP_05948900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291281344|ref|YP_003498162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293403558|ref|ZP_06647649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|293408587|ref|ZP_06652426.1| Clp protease [Escherichia coli B354]
gi|297516115|ref|ZP_06934501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
OP50]
gi|298379170|ref|ZP_06989051.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|300818231|ref|ZP_07098442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300820317|ref|ZP_07100469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300903295|ref|ZP_07121223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300918180|ref|ZP_07134787.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300930260|ref|ZP_07145673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300947910|ref|ZP_07162058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|301025667|ref|ZP_07189185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|301330696|ref|ZP_07223298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|306813096|ref|ZP_07447289.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|307312185|ref|ZP_07591821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|309794830|ref|ZP_07689251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|331640957|ref|ZP_08342092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331645613|ref|ZP_08346717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331651375|ref|ZP_08352400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331656494|ref|ZP_08357456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331661818|ref|ZP_08362741.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331666792|ref|ZP_08367666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331671984|ref|ZP_08372780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331676109|ref|ZP_08376821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331681832|ref|ZP_08382465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|366160317|ref|ZP_09460179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
TW09308]
gi|378714157|ref|YP_005279050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|383177027|ref|YP_005455032.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
53G]
gi|384541993|ref|YP_005726054.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|386596687|ref|YP_006093087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|386598154|ref|YP_006099660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|386605609|ref|YP_006111909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|386607800|ref|YP_006123286.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|386622809|ref|YP_006142537.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|386628026|ref|YP_006147746.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|386632946|ref|YP_006152665.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|386637852|ref|YP_006104650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|386702756|ref|YP_006166593.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|386703656|ref|YP_006167503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|386708240|ref|YP_006171961.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|387505454|ref|YP_006157710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|387605947|ref|YP_006094803.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|387610962|ref|YP_006114078.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|387615754|ref|YP_006118776.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620196|ref|YP_006127823.1| hypothetical protein ECDH1ME8569_0422 [Escherichia coli DH1]
gi|387828451|ref|YP_003348388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|387881033|ref|YP_006311335.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388476543|ref|YP_488729.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. W3110]
gi|404373759|ref|ZP_10978994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|407467887|ref|YP_006785671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483383|ref|YP_006780532.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483936|ref|YP_006771482.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|416273477|ref|ZP_11643392.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|416287650|ref|ZP_11648936.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|416296133|ref|ZP_11651339.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|416312992|ref|ZP_11657927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|416316808|ref|ZP_11659940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|416325624|ref|ZP_11666032.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|416334479|ref|ZP_11671387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|416341381|ref|ZP_11676004.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|416780506|ref|ZP_11876892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|416791657|ref|ZP_11881790.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|416803300|ref|ZP_11886651.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|416811871|ref|ZP_11890144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97]
gi|416822832|ref|ZP_11895159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835006|ref|ZP_11901254.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|417082904|ref|ZP_11951073.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|417114443|ref|ZP_11965714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|417121175|ref|ZP_11970629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|417134652|ref|ZP_11979437.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|417139755|ref|ZP_11983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|417144466|ref|ZP_11986272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|417152903|ref|ZP_11991694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|417168750|ref|ZP_12001201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|417174458|ref|ZP_12004254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|417179207|ref|ZP_12007307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|417190845|ref|ZP_12013441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|417218290|ref|ZP_12023892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|417225434|ref|ZP_12028725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|417247136|ref|ZP_12040237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|417253476|ref|ZP_12045235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|417260673|ref|ZP_12048171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|417267200|ref|ZP_12054561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|417270620|ref|ZP_12057973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|417275444|ref|ZP_12062781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|417284212|ref|ZP_12071507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|417288247|ref|ZP_12075532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|417293158|ref|ZP_12080438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|417299495|ref|ZP_12086725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|417306939|ref|ZP_12093819.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|417661013|ref|ZP_12310594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|417754233|ref|ZP_12402328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|417803792|ref|ZP_12450827.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417826439|ref|ZP_12473017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|417831544|ref|ZP_12478066.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417867743|ref|ZP_12512778.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|417945744|ref|ZP_12588973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|417976590|ref|ZP_12617382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|418253617|ref|ZP_12878642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|418262477|ref|ZP_12883856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|418941047|ref|ZP_13494387.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|419000594|ref|ZP_13548156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|419006128|ref|ZP_13553584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|419011995|ref|ZP_13559360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|419016899|ref|ZP_13564225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|419022590|ref|ZP_13569832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|419027401|ref|ZP_13574601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|419033183|ref|ZP_13580281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|419038181|ref|ZP_13585241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|419043480|ref|ZP_13590454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|419055094|ref|ZP_13601952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|419060688|ref|ZP_13607473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|419066566|ref|ZP_13613247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|419073638|ref|ZP_13619211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|419078751|ref|ZP_13624236.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|419084402|ref|ZP_13629818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|419096498|ref|ZP_13641742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|419102072|ref|ZP_13647239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|419107525|ref|ZP_13652635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|419113292|ref|ZP_13658327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|419118878|ref|ZP_13663863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|419124476|ref|ZP_13669380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|419130098|ref|ZP_13674951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|419134856|ref|ZP_13679665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|419140968|ref|ZP_13685725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|419152270|ref|ZP_13696858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|419157778|ref|ZP_13702304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|419162710|ref|ZP_13707190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|419168433|ref|ZP_13712831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|419173782|ref|ZP_13717638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|419179426|ref|ZP_13723051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|419184984|ref|ZP_13728506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|419190232|ref|ZP_13733700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|419195534|ref|ZP_13738942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|419201573|ref|ZP_13744801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|419207438|ref|ZP_13750566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|419213878|ref|ZP_13756910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|419219702|ref|ZP_13762659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|419225166|ref|ZP_13768056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|419230910|ref|ZP_13773702.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|419236285|ref|ZP_13779036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|419241879|ref|ZP_13784529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|419247288|ref|ZP_13789903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|419253064|ref|ZP_13795614.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|419259073|ref|ZP_13801533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|419265176|ref|ZP_13807563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|419270761|ref|ZP_13813094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|419276559|ref|ZP_13818829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|419282161|ref|ZP_13824383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|419287902|ref|ZP_13830020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|419293241|ref|ZP_13835302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|419298681|ref|ZP_13840699.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|419304965|ref|ZP_13846879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|419309990|ref|ZP_13851867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|419315309|ref|ZP_13857137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|419321085|ref|ZP_13862828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|419327332|ref|ZP_13868965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|419332742|ref|ZP_13874306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|419339678|ref|ZP_13881155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|419344085|ref|ZP_13885469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|419353421|ref|ZP_13894707.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|419358764|ref|ZP_13899995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|419363857|ref|ZP_13905039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|419368721|ref|ZP_13909850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|419373906|ref|ZP_13914962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|419379324|ref|ZP_13920305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|419384580|ref|ZP_13925484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|419699353|ref|ZP_14226969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|419811819|ref|ZP_14336691.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|419862464|ref|ZP_14385069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419867899|ref|ZP_14390213.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419876969|ref|ZP_14398628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|419882604|ref|ZP_14403814.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|419888442|ref|ZP_14408949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419893037|ref|ZP_14413043.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419900593|ref|ZP_14420019.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|419906391|ref|ZP_14425303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|419915478|ref|ZP_14433843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|419916845|ref|ZP_14435129.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|419923190|ref|ZP_14441152.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|419928055|ref|ZP_14445775.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|419937108|ref|ZP_14454024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|419945558|ref|ZP_14461997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|419948924|ref|ZP_14465187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|420088256|ref|ZP_14600160.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420092934|ref|ZP_14604624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420103064|ref|ZP_14613978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|420109693|ref|ZP_14619793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|420113374|ref|ZP_14623117.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|420119640|ref|ZP_14628905.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|420125718|ref|ZP_14634509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|420130828|ref|ZP_14639308.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|420267737|ref|ZP_14770144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|420278960|ref|ZP_14781227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|420284842|ref|ZP_14787060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|420290573|ref|ZP_14792738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|420296234|ref|ZP_14798331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|420302234|ref|ZP_14804266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|420307840|ref|ZP_14809814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|420313332|ref|ZP_14815240.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|420318881|ref|ZP_14820738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|420324044|ref|ZP_14825830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|420329691|ref|ZP_14831396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|420334604|ref|ZP_14836226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|420340003|ref|ZP_14841530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|420351206|ref|ZP_14852405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|420357063|ref|ZP_14858079.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|420361980|ref|ZP_14862906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|420378645|ref|ZP_14878144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|420384075|ref|ZP_14883463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|420389777|ref|ZP_14889050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|421681140|ref|ZP_16120970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|421777839|ref|ZP_16214429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|421810660|ref|ZP_16246471.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|421816753|ref|ZP_16252316.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|421822138|ref|ZP_16257576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|421828871|ref|ZP_16264201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|422330694|ref|ZP_16411711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|422748496|ref|ZP_16802409.1| Clp protease [Escherichia coli H252]
gi|422753090|ref|ZP_16806917.1| Clp protease [Escherichia coli H263]
gi|422763232|ref|ZP_16816987.1| Clp protease [Escherichia coli E1167]
gi|422764968|ref|ZP_16818695.1| Clp protease [Escherichia coli E1520]
gi|422769666|ref|ZP_16823357.1| Clp protease [Escherichia coli E482]
gi|422777134|ref|ZP_16830787.1| Clp protease [Escherichia coli H120]
gi|422782770|ref|ZP_16835555.1| Clp protease [Escherichia coli TW10509]
gi|422785047|ref|ZP_16837786.1| Clp protease [Escherichia coli H489]
gi|422791245|ref|ZP_16843948.1| Clp protease [Escherichia coli TA007]
gi|422802318|ref|ZP_16850812.1| Clp protease [Escherichia coli M863]
gi|422804516|ref|ZP_16852948.1| Clp protease [Escherichia fergusonii B253]
gi|422816451|ref|ZP_16864666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|422830602|ref|ZP_16878758.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|422835147|ref|ZP_16883204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|422838959|ref|ZP_16886931.1| Clp protease [Escherichia coli H397]
gi|422960324|ref|ZP_16971772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|422974758|ref|ZP_16976459.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|422991153|ref|ZP_16981924.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|422993092|ref|ZP_16983856.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|422998303|ref|ZP_16989059.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|423006764|ref|ZP_16997507.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|423008407|ref|ZP_16999145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|423022594|ref|ZP_17013297.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|423027748|ref|ZP_17018441.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|423033585|ref|ZP_17024269.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|423036451|ref|ZP_17027125.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041571|ref|ZP_17032238.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048257|ref|ZP_17038914.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423051841|ref|ZP_17040649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423058806|ref|ZP_17047602.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|423652932|ref|ZP_17628235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|423701218|ref|ZP_17675677.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|423710208|ref|ZP_17684558.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|424075299|ref|ZP_17812663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|424081627|ref|ZP_17818503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|424088248|ref|ZP_17824523.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|424113671|ref|ZP_17847839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|424132076|ref|ZP_17864895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|424145062|ref|ZP_17876849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|424151208|ref|ZP_17882479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|424184946|ref|ZP_17887912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|424266451|ref|ZP_17893814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|424421800|ref|ZP_17899543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|424459914|ref|ZP_17910872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|424472944|ref|ZP_17922637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|424478892|ref|ZP_17928155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|424484962|ref|ZP_17933846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|424491084|ref|ZP_17939498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|424498173|ref|ZP_17945463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|424504402|ref|ZP_17951198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|424510660|ref|ZP_17956914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|424518228|ref|ZP_17962674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|424524057|ref|ZP_17968098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|424530265|ref|ZP_17973911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|424536239|ref|ZP_17979518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|424542147|ref|ZP_17984984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|424548471|ref|ZP_17990695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|424554735|ref|ZP_17996473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|424561082|ref|ZP_18002383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|424567110|ref|ZP_18008042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|424747928|ref|ZP_18176080.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424766683|ref|ZP_18194028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424768157|ref|ZP_18195449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|424836929|ref|ZP_18261566.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|425095924|ref|ZP_18498965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|425102063|ref|ZP_18504728.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|425123686|ref|ZP_18525280.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|425129726|ref|ZP_18530842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|425136066|ref|ZP_18536805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|425141966|ref|ZP_18542273.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|425153902|ref|ZP_18553465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|425160351|ref|ZP_18559540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|425165861|ref|ZP_18564685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|425178034|ref|ZP_18576103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|425197263|ref|ZP_18593928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|425209679|ref|ZP_18605430.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|425215719|ref|ZP_18611052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|425222289|ref|ZP_18617163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|425228534|ref|ZP_18622945.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|425234834|ref|ZP_18628808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|425240839|ref|ZP_18634489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|425246963|ref|ZP_18640187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|425252694|ref|ZP_18645586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|425259005|ref|ZP_18651383.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|425265103|ref|ZP_18657041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|425281805|ref|ZP_18672926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|425292563|ref|ZP_18683162.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|425303944|ref|ZP_18693733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|425309306|ref|ZP_18698786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|425315219|ref|ZP_18704309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|425327464|ref|ZP_18715700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|425333649|ref|ZP_18721382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|425340070|ref|ZP_18727325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|425352161|ref|ZP_18738555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|425358151|ref|ZP_18744137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|425364261|ref|ZP_18749824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|425370706|ref|ZP_18755682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|425377258|ref|ZP_18761660.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|425383500|ref|ZP_18767391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|425390200|ref|ZP_18773670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|425396318|ref|ZP_18779376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|425402303|ref|ZP_18784919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|425408844|ref|ZP_18791011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|425415114|ref|ZP_18796764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|425421050|ref|ZP_18802281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|425426270|ref|ZP_18807331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|427803504|ref|ZP_18970571.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|427808122|ref|ZP_18975187.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|428951073|ref|ZP_19023219.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|428956929|ref|ZP_19028639.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|428963261|ref|ZP_19034457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|428969331|ref|ZP_19039973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|428975890|ref|ZP_19046071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|428981655|ref|ZP_19051401.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|428987879|ref|ZP_19057179.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|428993691|ref|ZP_19062606.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|428999790|ref|ZP_19068308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|429006032|ref|ZP_19073956.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|429012377|ref|ZP_19079638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|429018591|ref|ZP_19085384.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|429030581|ref|ZP_19096467.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|429036767|ref|ZP_19102216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|429042639|ref|ZP_19107653.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|429048495|ref|ZP_19113155.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|429053858|ref|ZP_19118354.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|429059551|ref|ZP_19123703.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|429064996|ref|ZP_19128865.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429071563|ref|ZP_19134920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|429722633|ref|ZP_19257531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429774730|ref|ZP_19306733.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429779993|ref|ZP_19311946.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784045|ref|ZP_19315958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429789383|ref|ZP_19321258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429795613|ref|ZP_19327439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429801539|ref|ZP_19333317.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429805171|ref|ZP_19336918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429809982|ref|ZP_19341684.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429815742|ref|ZP_19347401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429821330|ref|ZP_19352943.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429824044|ref|ZP_19355561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429830412|ref|ZP_19361279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429907004|ref|ZP_19372973.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911202|ref|ZP_19377158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917038|ref|ZP_19382978.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922076|ref|ZP_19387997.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429927894|ref|ZP_19393800.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429931826|ref|ZP_19397721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933428|ref|ZP_19399318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939082|ref|ZP_19404956.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429946725|ref|ZP_19412580.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949357|ref|ZP_19415205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429957641|ref|ZP_19423470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432352100|ref|ZP_19595409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|432356781|ref|ZP_19600028.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|432361188|ref|ZP_19604385.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|432368416|ref|ZP_19611521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|432371211|ref|ZP_19614275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|432375520|ref|ZP_19618534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|432380065|ref|ZP_19623029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|432385894|ref|ZP_19628793.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|432390365|ref|ZP_19633229.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|432396311|ref|ZP_19639103.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|432400549|ref|ZP_19643309.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|432405307|ref|ZP_19648030.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|432410506|ref|ZP_19653189.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|432415389|ref|ZP_19658020.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|432420547|ref|ZP_19663105.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|432429586|ref|ZP_19672046.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|432430553|ref|ZP_19672998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|432435082|ref|ZP_19677483.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|432439750|ref|ZP_19682113.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|432444874|ref|ZP_19687183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|432453235|ref|ZP_19695475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|432455365|ref|ZP_19697567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|432459408|ref|ZP_19701572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|432464449|ref|ZP_19706557.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|432469870|ref|ZP_19711923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|432474457|ref|ZP_19716470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|432479798|ref|ZP_19721763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|432484165|ref|ZP_19726089.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|432492733|ref|ZP_19734572.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|432494306|ref|ZP_19736124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|432498681|ref|ZP_19740461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|432503145|ref|ZP_19744882.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|432512645|ref|ZP_19749888.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|432521074|ref|ZP_19758239.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|432522590|ref|ZP_19759729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|432529805|ref|ZP_19766849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|432541291|ref|ZP_19778166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|432541813|ref|ZP_19778674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|432547157|ref|ZP_19783954.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|432552445|ref|ZP_19789177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|432557454|ref|ZP_19794147.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|432562347|ref|ZP_19798974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|432567276|ref|ZP_19803803.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|432572432|ref|ZP_19808923.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|432579114|ref|ZP_19815548.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|432582548|ref|ZP_19818958.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|432586736|ref|ZP_19823108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|432591556|ref|ZP_19827885.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|432596322|ref|ZP_19832611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|432600954|ref|ZP_19837209.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|432606322|ref|ZP_19842518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|432610171|ref|ZP_19846344.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|432615211|ref|ZP_19851346.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|432620540|ref|ZP_19856586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|432626021|ref|ZP_19862006.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|432630007|ref|ZP_19865957.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|432635751|ref|ZP_19871637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|432639556|ref|ZP_19875401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|432644872|ref|ZP_19880675.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|432649965|ref|ZP_19885727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|432654447|ref|ZP_19890166.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|432659679|ref|ZP_19895340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|432664625|ref|ZP_19900221.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|432669369|ref|ZP_19904918.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|432678032|ref|ZP_19913458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|432678859|ref|ZP_19914262.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|432684270|ref|ZP_19919589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|432690327|ref|ZP_19925573.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|432693221|ref|ZP_19928436.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|432697754|ref|ZP_19932926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|432703009|ref|ZP_19938135.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|432709268|ref|ZP_19944337.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|432712158|ref|ZP_19947210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|432717449|ref|ZP_19952451.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|432722000|ref|ZP_19956927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|432726546|ref|ZP_19961429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|432731162|ref|ZP_19966001.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|432735963|ref|ZP_19970739.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|432740233|ref|ZP_19974955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|432744374|ref|ZP_19979079.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|432748893|ref|ZP_19983516.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|432753234|ref|ZP_19987802.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|432758222|ref|ZP_19992745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|432763728|ref|ZP_19998180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|432769238|ref|ZP_20003611.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|432773617|ref|ZP_20007907.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|432777289|ref|ZP_20011543.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|432782345|ref|ZP_20016531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|432786085|ref|ZP_20020253.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|432791686|ref|ZP_20025780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|432797653|ref|ZP_20031681.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|432800720|ref|ZP_20034710.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|432804518|ref|ZP_20038464.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|432812549|ref|ZP_20046398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|432813933|ref|ZP_20047744.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|432819756|ref|ZP_20053470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|432825885|ref|ZP_20059542.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|432830425|ref|ZP_20064034.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|432833493|ref|ZP_20067041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|432837986|ref|ZP_20071479.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|432842724|ref|ZP_20076145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|432848215|ref|ZP_20080087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|432859093|ref|ZP_20085267.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|432873099|ref|ZP_20092797.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|432879929|ref|ZP_20096749.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|432884403|ref|ZP_20099359.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|432893053|ref|ZP_20105158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|432897224|ref|ZP_20108220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|432902770|ref|ZP_20112450.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|432910123|ref|ZP_20117250.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|432917569|ref|ZP_20122100.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|432924874|ref|ZP_20127013.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|432932774|ref|ZP_20132628.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|432942310|ref|ZP_20139652.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|432945103|ref|ZP_20141398.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|432953570|ref|ZP_20145869.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|432959821|ref|ZP_20150107.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|432966548|ref|ZP_20155468.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|432970614|ref|ZP_20159492.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|432977159|ref|ZP_20165984.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|432979941|ref|ZP_20168722.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|432984129|ref|ZP_20172868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|432989542|ref|ZP_20178212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|432994232|ref|ZP_20182849.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|432998651|ref|ZP_20187191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|433003963|ref|ZP_20192401.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|433011171|ref|ZP_20199576.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|433012611|ref|ZP_20200994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|433017393|ref|ZP_20205664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|433022184|ref|ZP_20210210.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|433027479|ref|ZP_20215355.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|433031873|ref|ZP_20219688.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|433037373|ref|ZP_20224994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|433041917|ref|ZP_20229452.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|433046508|ref|ZP_20233940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|433051736|ref|ZP_20238974.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|433056775|ref|ZP_20243862.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|433061654|ref|ZP_20248620.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|433066645|ref|ZP_20253489.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|433071486|ref|ZP_20258188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|433076635|ref|ZP_20263201.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|433081384|ref|ZP_20267859.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|433086041|ref|ZP_20272445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|433090761|ref|ZP_20277069.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|433095304|ref|ZP_20281520.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|433099985|ref|ZP_20286097.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|433104572|ref|ZP_20290595.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|433109689|ref|ZP_20295569.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|433114388|ref|ZP_20300204.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|433118986|ref|ZP_20304700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|433124005|ref|ZP_20309596.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|433128765|ref|ZP_20314245.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|433133585|ref|ZP_20318968.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|433138066|ref|ZP_20323353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|433142999|ref|ZP_20328178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|433147894|ref|ZP_20332960.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|433152581|ref|ZP_20337551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|433157380|ref|ZP_20342256.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|433162251|ref|ZP_20347016.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|433167226|ref|ZP_20351902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|433172307|ref|ZP_20356867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|433176883|ref|ZP_20361350.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|433181970|ref|ZP_20366273.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|433187242|ref|ZP_20371371.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|433192367|ref|ZP_20376389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|433197024|ref|ZP_20380953.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|433201858|ref|ZP_20385670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|433206587|ref|ZP_20390288.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|433211367|ref|ZP_20394982.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|442590116|ref|ZP_21008900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442596446|ref|ZP_21014257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|442606706|ref|ZP_21021501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443616464|ref|YP_007380320.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444922755|ref|ZP_21242478.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444929077|ref|ZP_21248231.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444934427|ref|ZP_21253371.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444940006|ref|ZP_21258655.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444945649|ref|ZP_21264071.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444951153|ref|ZP_21269379.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444956607|ref|ZP_21274609.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444961951|ref|ZP_21279705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444967642|ref|ZP_21285119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444973144|ref|ZP_21290427.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444983978|ref|ZP_21300848.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444989221|ref|ZP_21305963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444994575|ref|ZP_21311172.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|445000071|ref|ZP_21316535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|445005527|ref|ZP_21321868.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|445010700|ref|ZP_21326894.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|445016482|ref|ZP_21332533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|445021929|ref|ZP_21337852.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|445027171|ref|ZP_21342951.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|445032666|ref|ZP_21348292.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|445038359|ref|ZP_21353830.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|445043574|ref|ZP_21358914.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|445049146|ref|ZP_21364317.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|445054796|ref|ZP_21369749.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|450185742|ref|ZP_21889212.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|450211060|ref|ZP_21894199.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|450239654|ref|ZP_21899081.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
gi|452969098|ref|ZP_21967325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4009]
gi|62288033|sp|P0A6G7.1|CLPP_ECOLI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Heat shock protein
F21.5; AltName: Full=Protease Ti; Flags: Precursor
gi|62288034|sp|P0A6G8.1|CLPP_ECOL6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288035|sp|P0A6G9.1|CLPP_ECO57 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288036|sp|P0A6H0.1|CLPP_SHIFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183183|sp|Q325G4.1|CLPP_SHIBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183184|sp|Q32JJ3.1|CLPP_SHIDS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816465|sp|Q3Z4W6.1|CLPP_SHISS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243134|sp|Q0TKK4.1|CLPP_ECOL5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|116243136|sp|Q1RF98.1|CLPP_ECOUT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|122957620|sp|Q0T7E6.1|CLPP_SHIF8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201821|sp|A1A8A6.1|CLPP_ECOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008648|sp|A7ZIJ5.1|CLPP_ECO24 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008649|sp|A7ZX95.1|CLPP_ECOHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082457|sp|B1J011.1|CLPP_ECOLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|310942734|pdb|3MT6|R Chain R, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942735|pdb|3MT6|S Chain S, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942736|pdb|3MT6|T Chain T, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942737|pdb|3MT6|U Chain U, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942738|pdb|3MT6|O Chain O, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942739|pdb|3MT6|P Chain P, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942740|pdb|3MT6|Q Chain Q, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942741|pdb|3MT6|Y Chain Y, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942742|pdb|3MT6|Z Chain Z, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942743|pdb|3MT6|AA Chain a, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942744|pdb|3MT6|BB Chain b, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942745|pdb|3MT6|V Chain V, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942746|pdb|3MT6|W Chain W, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942747|pdb|3MT6|X Chain X, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942748|pdb|3MT6|M Chain M, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942749|pdb|3MT6|L Chain L, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942750|pdb|3MT6|K Chain K, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942751|pdb|3MT6|J Chain J, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942752|pdb|3MT6|I Chain I, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942753|pdb|3MT6|H Chain H, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942754|pdb|3MT6|N Chain N, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942755|pdb|3MT6|F Chain F, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942756|pdb|3MT6|E Chain E, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942757|pdb|3MT6|D Chain D, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942758|pdb|3MT6|C Chain C, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942759|pdb|3MT6|B Chain B, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942760|pdb|3MT6|A Chain A, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942761|pdb|3MT6|G Chain G, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|12513299|gb|AAG54787.1|AE005223_2 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli O157:H7 str.
EDL933]
gi|26106846|gb|AAN79031.1|AE016756_214 ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|145556|gb|AAA23588.1| ATP-dependent protease (clpP) [Escherichia coli]
gi|1773121|gb|AAB40193.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786641|gb|AAC73540.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|13359948|dbj|BAB33914.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli O157:H7 str. Sakai]
gi|30040183|gb|AAP15916.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str.
2457T]
gi|56383209|gb|AAN42038.2| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str. 301]
gi|73854489|gb|AAZ87196.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella sonnei Ss046]
gi|81239804|gb|ABB60514.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella dysenteriae Sd197]
gi|81244336|gb|ABB65044.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella boydii Sb227]
gi|85674577|dbj|BAE76217.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K12 substr. W3110]
gi|91071085|gb|ABE05966.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Escherichia coli UTI89]
gi|110342290|gb|ABG68527.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110614013|gb|ABF02680.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella flexneri 5 str. 8401]
gi|115511821|gb|ABI99895.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Escherichia coli APEC O1]
gi|157065644|gb|ABV04899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli HS]
gi|157080329|gb|ABV20037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E24377A]
gi|169756118|gb|ACA78817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ATCC 8739]
gi|169887858|gb|ACB01565.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170520994|gb|ACB19172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli SMS-3-5]
gi|187428295|gb|ACD07569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii CDC 3083-94]
gi|187766815|gb|EDU30659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|188487796|gb|EDU62899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|189003087|gb|EDU72073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|189358046|gb|EDU76465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|189362475|gb|EDU80894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|189373600|gb|EDU92016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|190905047|gb|EDV64714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|192929158|gb|EDV82768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|208729341|gb|EDZ78942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208732507|gb|EDZ81195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208737157|gb|EDZ84841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209743854|gb|ACI70234.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743856|gb|ACI70235.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743858|gb|ACI70236.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743860|gb|ACI70237.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743862|gb|ACI70238.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209910913|dbj|BAG75987.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215263590|emb|CAS07920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O127:H6 str. E2348/69]
gi|217322633|gb|EEC31057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218350632|emb|CAU96324.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli 55989]
gi|218357436|emb|CAQ90075.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia fergusonii ATCC 35469]
gi|218359772|emb|CAQ97313.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI1]
gi|218364116|emb|CAR01781.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli S88]
gi|218368637|emb|CAR16376.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI39]
gi|218425865|emb|CAR06671.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli ED1a]
gi|218430818|emb|CAR11692.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli UMN026]
gi|222032232|emb|CAP74971.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227838638|gb|EEJ49104.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238863325|gb|ACR65323.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|242376218|emb|CAQ30909.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253325618|gb|ACT30220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972407|gb|ACT38078.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|253976617|gb|ACT42287.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254591021|gb|ACT70382.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. TW14359]
gi|257752309|dbj|BAI23811.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757785|dbj|BAI29282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762954|dbj|BAI34449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260450376|gb|ACX40798.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|281177608|dbj|BAI53938.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|281599777|gb|ADA72761.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|284920247|emb|CBG33306.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|290761217|gb|ADD55178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291429411|gb|EFF02431.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|291471765|gb|EFF14248.1| Clp protease [Escherichia coli B354]
gi|294492533|gb|ADE91289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|298280283|gb|EFI21787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|299880021|gb|EFI88232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|300404590|gb|EFJ88128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300414631|gb|EFJ97941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300452510|gb|EFK16130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|300461832|gb|EFK25325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300527102|gb|EFK48171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300529122|gb|EFK50184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300843357|gb|EFK71117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|305853859|gb|EFM54298.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|306907687|gb|EFN38189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|307552344|gb|ADN45119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|307628093|gb|ADN72397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|308121483|gb|EFO58745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|309700698|emb|CBI99994.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|312945015|gb|ADR25842.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059717|gb|ADT74044.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|315135119|dbj|BAJ42278.1| conserved hypothetical protein [Escherichia coli DH1]
gi|320173743|gb|EFW48926.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|320178281|gb|EFW53255.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|320186067|gb|EFW60812.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|320192853|gb|EFW67493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|320197089|gb|EFW71708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|320201681|gb|EFW76257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|320638432|gb|EFX08146.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643812|gb|EFX12935.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|320649163|gb|EFX17741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|320656056|gb|EFX23972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661206|gb|EFX28637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665182|gb|EFX32275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323379718|gb|ADX51986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11FL]
gi|323938623|gb|EGB34872.1| Clp protease [Escherichia coli E1520]
gi|323943244|gb|EGB39400.1| Clp protease [Escherichia coli E482]
gi|323945342|gb|EGB41398.1| Clp protease [Escherichia coli H120]
gi|323952951|gb|EGB48819.1| Clp protease [Escherichia coli H252]
gi|323958630|gb|EGB54333.1| Clp protease [Escherichia coli H263]
gi|323963427|gb|EGB58989.1| Clp protease [Escherichia coli H489]
gi|323965124|gb|EGB60583.1| Clp protease [Escherichia coli M863]
gi|323972291|gb|EGB67501.1| Clp protease [Escherichia coli TA007]
gi|323976078|gb|EGB71171.1| Clp protease [Escherichia coli TW10509]
gi|324114664|gb|EGC08632.1| Clp protease [Escherichia fergusonii B253]
gi|324116925|gb|EGC10838.1| Clp protease [Escherichia coli E1167]
gi|326341201|gb|EGD64993.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|326346024|gb|EGD69763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|330910231|gb|EGH38741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|331037755|gb|EGI09975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331045775|gb|EGI17901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331051116|gb|EGI23168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331054742|gb|EGI26751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331060240|gb|EGI32204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331066016|gb|EGI37900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331070973|gb|EGI42332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331076167|gb|EGI47449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331081034|gb|EGI52199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|335577004|gb|EGM63237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri J1713]
gi|338771515|gb|EGP26255.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
PCN033]
gi|340735696|gb|EGR64752.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741501|gb|EGR75647.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. LB226692]
gi|341921032|gb|EGT70636.1| hypothetical protein C22711_4669 [Escherichia coli O104:H4 str.
C227-11]
gi|342362476|gb|EGU26594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH140A]
gi|344193757|gb|EGV47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
XH001]
gi|349736547|gb|AEQ11253.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O7:K1 str. CE10]
gi|354858263|gb|EHF18714.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 04-8351]
gi|354860139|gb|EHF20586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C227-11]
gi|354866835|gb|EHF27258.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. C236-11]
gi|354877171|gb|EHF37531.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 09-7901]
gi|354879478|gb|EHF39816.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4404]
gi|354884065|gb|EHF44379.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-3677]
gi|354885866|gb|EHF46158.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4522]
gi|354888933|gb|EHF49187.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4623]
gi|354901534|gb|EHF61661.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354905765|gb|EHF65848.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354908272|gb|EHF68328.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354918744|gb|EHF78700.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354922432|gb|EHF82347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|355353088|gb|EHG02260.1| hypothetical protein i01_00596 [Escherichia coli cloneA_i1]
gi|355418925|gb|AER83122.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i2']
gi|355423845|gb|AER88041.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
str. 'clone D i14']
gi|359331197|dbj|BAL37644.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MDS42]
gi|371594122|gb|EHN82994.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H494]
gi|371595518|gb|EHN84367.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
TA124]
gi|371604298|gb|EHN92927.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B093]
gi|371611430|gb|EHN99952.1| Clp protease [Escherichia coli H397]
gi|371612952|gb|EHO01455.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E101]
gi|373248398|gb|EHP67828.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
4_1_47FAA]
gi|374357448|gb|AEZ39155.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. RM12579]
gi|375323616|gb|EHS69321.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H43 str. T22]
gi|377850929|gb|EHU15884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1C]
gi|377854084|gb|EHU18974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1B]
gi|377862760|gb|EHU27567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1D]
gi|377866873|gb|EHU31637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1E]
gi|377868228|gb|EHU32972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2A]
gi|377879179|gb|EHU43752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2B]
gi|377883602|gb|EHU48120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2D]
gi|377885903|gb|EHU50394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2C]
gi|377898425|gb|EHU62785.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC2E]
gi|377900553|gb|EHU64885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3A]
gi|377914360|gb|EHU78483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3C]
gi|377918753|gb|EHU82800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3D]
gi|377920840|gb|EHU84855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3E]
gi|377932504|gb|EHU96358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3F]
gi|377934476|gb|EHU98307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4A]
gi|377940607|gb|EHV04356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4B]
gi|377951398|gb|EHV15017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4D]
gi|377955447|gb|EHV19003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4E]
gi|377966083|gb|EHV29496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5A]
gi|377967396|gb|EHV30802.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4F]
gi|377973509|gb|EHV36849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5B]
gi|377981472|gb|EHV44731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5D]
gi|377981714|gb|EHV44972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5C]
gi|377988579|gb|EHV51757.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC5E]
gi|378000301|gb|EHV63375.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6A]
gi|378003854|gb|EHV66894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6C]
gi|378014252|gb|EHV77158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6D]
gi|378017176|gb|EHV80051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6E]
gi|378018839|gb|EHV81685.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7A]
gi|378027887|gb|EHV90512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7C]
gi|378032402|gb|EHV94983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7D]
gi|378037735|gb|EHW00258.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7B]
gi|378042335|gb|EHW04784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC7E]
gi|378052755|gb|EHW15057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8A]
gi|378057167|gb|EHW19402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8B]
gi|378063094|gb|EHW25264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8C]
gi|378069189|gb|EHW31284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8D]
gi|378072756|gb|EHW34813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC8E]
gi|378081868|gb|EHW43816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9A]
gi|378082738|gb|EHW44681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9B]
gi|378090507|gb|EHW52344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9C]
gi|378095202|gb|EHW56992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9D]
gi|378102386|gb|EHW64063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC9E]
gi|378107900|gb|EHW69518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10A]
gi|378116922|gb|EHW78440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10B]
gi|378119411|gb|EHW80906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10C]
gi|378121706|gb|EHW83157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10D]
gi|378134748|gb|EHW96069.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10E]
gi|378136536|gb|EHW97830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11A]
gi|378139984|gb|EHX01214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC10F]
gi|378147352|gb|EHX08500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11B]
gi|378153094|gb|EHX14180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11D]
gi|378157257|gb|EHX18299.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11C]
gi|378161713|gb|EHX22689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC11E]
gi|378175102|gb|EHX35921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12A]
gi|378175608|gb|EHX36424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12B]
gi|378177102|gb|EHX37903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12C]
gi|378190584|gb|EHX51168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13A]
gi|378191144|gb|EHX51720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12E]
gi|378191957|gb|EHX52531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC12D]
gi|378208329|gb|EHX68713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13D]
gi|378209338|gb|EHX69712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13C]
gi|378219877|gb|EHX80144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13E]
gi|378221927|gb|EHX82169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14A]
gi|378226320|gb|EHX86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14B]
gi|378234469|gb|EHX94547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14C]
gi|378237158|gb|EHX97185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC14D]
gi|380349368|gb|EIA37640.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SCI-07]
gi|383101824|gb|AFG39333.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
P12b]
gi|383394283|gb|AFH19241.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KO11FL]
gi|383403932|gb|AFH10175.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli W]
gi|383465981|gb|EID61002.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
5a str. M90T]
gi|385155302|gb|EIF17306.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O32:H37 str. P4]
gi|385539924|gb|EIF86751.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
M919]
gi|385704856|gb|EIG41928.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
B799]
gi|385712908|gb|EIG49847.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H730]
gi|386141518|gb|EIG82668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2741]
gi|386148905|gb|EIG95340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0246]
gi|386152506|gb|EIH03795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0588]
gi|386157483|gb|EIH13825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 97.0259]
gi|386164349|gb|EIH26135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1.2264]
gi|386169627|gb|EIH36135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.0497]
gi|386170798|gb|EIH42851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 99.0741]
gi|386177150|gb|EIH54629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2608]
gi|386186459|gb|EIH69175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93.0624]
gi|386191817|gb|EIH80558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0522]
gi|386193173|gb|EIH87472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli JB1-95]
gi|386200482|gb|EIH99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 96.154]
gi|386209764|gb|EII20251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 9.0111]
gi|386217407|gb|EII33896.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 4.0967]
gi|386225831|gb|EII48156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.3916]
gi|386229558|gb|EII56913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.3884]
gi|386236963|gb|EII68935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2.4168]
gi|386242097|gb|EII79010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3.2303]
gi|386242421|gb|EII84156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3003]
gi|386247039|gb|EII93212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07793]
gi|386252730|gb|EIJ02421.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli B41]
gi|386257287|gb|EIJ12778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 900105 (10e)]
gi|386794491|gb|AFJ27525.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Xuzhou21]
gi|388341952|gb|EIL08029.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|388345221|gb|EIL11007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388346439|gb|EIL12156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388360312|gb|EIL24533.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388361234|gb|EIL25368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|388368621|gb|EIL32246.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388377634|gb|EIL40429.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|388379316|gb|EIL41986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O26:H11 str. CVM10026]
gi|388383822|gb|EIL45570.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD1]
gi|388394242|gb|EIL55545.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-15]
gi|388395246|gb|EIL56470.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KD2]
gi|388398327|gb|EIL59247.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
576-1]
gi|388406306|gb|EIL66712.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
541-1]
gi|388415406|gb|EIL75336.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HM605]
gi|388420456|gb|EIL80148.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CUMT8]
gi|390650910|gb|EIN29283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1996]
gi|390652871|gb|EIN31043.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA517]
gi|390653352|gb|EIN31499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA505]
gi|390688660|gb|EIN63692.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA3]
gi|390708495|gb|EIN81715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA10]
gi|390710386|gb|EIN83408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA15]
gi|390720217|gb|EIN92929.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA22]
gi|390733902|gb|EIO05463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA25]
gi|390733923|gb|EIO05482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA24]
gi|390737013|gb|EIO08328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA28]
gi|390752231|gb|EIO22077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA31]
gi|390752793|gb|EIO22599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA32]
gi|390778620|gb|EIO46377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA42]
gi|390784219|gb|EIO51792.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA39]
gi|390785934|gb|EIO53476.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW06591]
gi|390794961|gb|EIO62246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10246]
gi|390801804|gb|EIO68855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW11039]
gi|390810296|gb|EIO77057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW07945]
gi|390812006|gb|EIO78691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09109]
gi|390819575|gb|EIO85908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW10119]
gi|390823101|gb|EIO89173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09098]
gi|390837270|gb|EIP01701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4203]
gi|390840057|gb|EIP04116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4196]
gi|390842294|gb|EIP06148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW09195]
gi|390855692|gb|EIP18374.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14301]
gi|390860042|gb|EIP22369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4421]
gi|390860502|gb|EIP22816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW14313]
gi|390871773|gb|EIP33153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4422]
gi|390876375|gb|EIP37361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4013]
gi|390886159|gb|EIP46297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4402]
gi|390888188|gb|EIP48084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4439]
gi|390895026|gb|EIP54516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4436]
gi|390904066|gb|EIP63082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1738]
gi|390910613|gb|EIP69344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4437]
gi|390911897|gb|EIP70578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1734]
gi|390915105|gb|EIP73623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC4448]
gi|391254798|gb|EIQ13957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2850-71]
gi|391256934|gb|EIQ16056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri CCH060]
gi|391259221|gb|EIQ18296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-1770]
gi|391268295|gb|EIQ27223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-315]
gi|391273843|gb|EIQ32661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-404]
gi|391288799|gb|EIQ47298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3226-85]
gi|391289061|gb|EIQ47557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 4444-74]
gi|391296907|gb|EIQ54983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 4822-66]
gi|391306878|gb|EIQ64626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 225-75]
gi|391309584|gb|EIQ67252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa12]
gi|391315322|gb|EIQ72855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPEC C342-62]
gi|394390767|gb|EJE67727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394394615|gb|EJE71178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|394399939|gb|EJE75900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|394405883|gb|EJE80980.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|394409054|gb|EJE83641.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|394411993|gb|EJE86173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|394431102|gb|EJF03345.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|394433365|gb|EJF05397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|397901491|gb|EJL17837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 6603-63]
gi|397903014|gb|EJL19321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei str. Moseley]
gi|404292798|gb|EJZ49589.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
1_1_43]
gi|404341888|gb|EJZ68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 1485-80]
gi|406779098|gb|AFS58522.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055680|gb|AFS75731.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063922|gb|AFS84969.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072549|gb|EKH06870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA7]
gi|408076058|gb|EKH10287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK920]
gi|408086071|gb|EKH19613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA34]
gi|408090667|gb|EKH23938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA506]
gi|408095712|gb|EKH28677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA507]
gi|408110228|gb|EKH42055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1999]
gi|408130322|gb|EKH60470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE037]
gi|408141708|gb|EKH71163.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA4]
gi|408150524|gb|EKH79106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA23]
gi|408153279|gb|EKH81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA49]
gi|408158626|gb|EKH86743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA45]
gi|408167182|gb|EKH94709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TT12B]
gi|408172668|gb|EKH99731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MA6]
gi|408174740|gb|EKI01704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5905]
gi|408187056|gb|EKI13037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli CB7326]
gi|408192241|gb|EKI17818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC96038]
gi|408192338|gb|EKI17914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5412]
gi|408206225|gb|EKI31037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW00353]
gi|408232196|gb|EKI55447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli N1]
gi|408233175|gb|EKI56310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA38]
gi|408239305|gb|EKI62058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1735]
gi|408249177|gb|EKI71129.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1736]
gi|408259573|gb|EKI80732.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1846]
gi|408268456|gb|EKI88812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1847]
gi|408270231|gb|EKI90440.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1848]
gi|408285341|gb|EKJ04371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1850]
gi|408288146|gb|EKJ06984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1856]
gi|408300617|gb|EKJ18302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1862]
gi|408301169|gb|EKJ18823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1864]
gi|408310092|gb|EKJ27176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1865]
gi|408318281|gb|EKJ34496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1868]
gi|408318837|gb|EKJ35039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1866]
gi|408331655|gb|EKJ46799.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1869]
gi|408337258|gb|EKJ51994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE098]
gi|408338660|gb|EKJ53306.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1870]
gi|408347912|gb|EKJ62055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1288]
gi|408350623|gb|EKJ64471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK523]
gi|408353294|gb|EKJ66816.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 0.1304]
gi|408457121|gb|EKJ80922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AD30]
gi|408559047|gb|EKK35390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 5.2239]
gi|408559378|gb|EKK35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4870]
gi|408585478|gb|EKK60345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0586]
gi|408590504|gb|EKK64979.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.2524]
gi|408592319|gb|EKK66711.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0833]
gi|408604556|gb|EKK78130.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0869]
gi|408605962|gb|EKK79442.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0416]
gi|408617328|gb|EKK90450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 10.0821]
gi|412961686|emb|CCK45593.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Escherichia coli chi7122]
gi|412968301|emb|CCJ42918.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli]
gi|421934149|gb|EKT91926.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|421945317|gb|EKU02534.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|421946795|gb|EKU03909.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|427214751|gb|EKV84023.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1042]
gi|427217281|gb|EKV86350.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 89.0511]
gi|427234000|gb|EKW01709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.2281]
gi|427234232|gb|EKW01931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0039]
gi|427236318|gb|EKW03899.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 90.0091]
gi|427251581|gb|EKW18144.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0056]
gi|427253203|gb|EKW19646.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 93.0055]
gi|427254457|gb|EKW20818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 94.0618]
gi|427270575|gb|EKW35453.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0943]
gi|427271063|gb|EKW35912.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0183]
gi|427276296|gb|EKW40870.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.1288]
gi|427286631|gb|EKW50469.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0428]
gi|427293895|gb|EKW57115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0939]
gi|427304913|gb|EKW67533.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0003]
gi|427306553|gb|EKW69072.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0932]
gi|427310961|gb|EKW73181.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0107]
gi|427321629|gb|EKW83308.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.1742]
gi|427322536|gb|EKW84167.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0007]
gi|427334773|gb|EKW95841.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0678]
gi|427336797|gb|EKW97746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0672]
gi|429260204|gb|EKY43797.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0109]
gi|429261864|gb|EKY45256.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 97.0010]
gi|429351546|gb|EKY88266.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02030]
gi|429352249|gb|EKY88965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429353007|gb|EKY89716.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02092]
gi|429366920|gb|EKZ03521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02093]
gi|429367831|gb|EKZ04423.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02281]
gi|429370326|gb|EKZ06892.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02318]
gi|429382713|gb|EKZ19177.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-02913]
gi|429384946|gb|EKZ21400.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03943]
gi|429385469|gb|EKZ21922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-03439]
gi|429397162|gb|EKZ33509.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. 11-04080]
gi|429399390|gb|EKZ35711.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429399698|gb|EKZ36018.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410452|gb|EKZ46674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429412352|gb|EKZ48549.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429419337|gb|EKZ55475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429427896|gb|EKZ63976.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434740|gb|EKZ70764.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429435564|gb|EKZ71582.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429440105|gb|EKZ76084.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429444705|gb|EKZ80650.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429451010|gb|EKZ86902.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429456502|gb|EKZ92347.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O104:H4 str. Ec11-9941]
gi|430879591|gb|ELC02922.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE4]
gi|430880733|gb|ELC04008.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE2]
gi|430888882|gb|ELC11553.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE10]
gi|430891423|gb|ELC13959.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE5]
gi|430900424|gb|ELC22443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE11]
gi|430901424|gb|ELC23392.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE12]
gi|430909943|gb|ELC31301.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE16]
gi|430912044|gb|ELC33295.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE15]
gi|430918693|gb|ELC39694.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE25]
gi|430922722|gb|ELC43469.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE21]
gi|430929269|gb|ELC49780.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE26]
gi|430932803|gb|ELC53222.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE28]
gi|430938442|gb|ELC58683.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE39]
gi|430943765|gb|ELC63871.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE44]
gi|430947421|gb|ELC67119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE181]
gi|430947712|gb|ELC67409.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE178]
gi|430956175|gb|ELC74851.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE187]
gi|430966661|gb|ELC84024.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE188]
gi|430969560|gb|ELC86664.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE189]
gi|430974577|gb|ELC91500.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE193]
gi|430976249|gb|ELC93124.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE191]
gi|430985237|gb|ELD01843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE201]
gi|430992492|gb|ELD08863.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE204]
gi|430997200|gb|ELD13467.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE205]
gi|430999937|gb|ELD16011.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE206]
gi|431010397|gb|ELD24745.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE208]
gi|431010815|gb|ELD25159.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE210]
gi|431013139|gb|ELD26873.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE213]
gi|431018567|gb|ELD31998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE212]
gi|431027822|gb|ELD40867.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE214]
gi|431032275|gb|ELD44986.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE216]
gi|431042147|gb|ELD52639.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE220]
gi|431044965|gb|ELD55220.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE224]
gi|431045628|gb|ELD55858.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE228]
gi|431054710|gb|ELD64279.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE230]
gi|431057196|gb|ELD66666.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE233]
gi|431064545|gb|ELD73412.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE235]
gi|431078330|gb|ELD85388.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE236]
gi|431085330|gb|ELD91443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE237]
gi|431087077|gb|ELD93082.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE47]
gi|431094507|gb|ELE00139.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE49]
gi|431099580|gb|ELE04600.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE51]
gi|431103109|gb|ELE07779.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE53]
gi|431108816|gb|ELE12787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE56]
gi|431110770|gb|ELE14687.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE55]
gi|431119564|gb|ELE22563.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE57]
gi|431124016|gb|ELE26670.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE58]
gi|431133000|gb|ELE34998.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE60]
gi|431133989|gb|ELE35955.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE62]
gi|431140544|gb|ELE42310.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE67]
gi|431144001|gb|ELE45709.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE66]
gi|431151484|gb|ELE52499.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE72]
gi|431158151|gb|ELE58772.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE75]
gi|431162899|gb|ELE63339.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE76]
gi|431165156|gb|ELE65514.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE77]
gi|431174033|gb|ELE74094.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE81]
gi|431174526|gb|ELE74571.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE80]
gi|431184353|gb|ELE84111.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE86]
gi|431185131|gb|ELE84861.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE83]
gi|431193336|gb|ELE92672.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE87]
gi|431195632|gb|ELE94601.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE93]
gi|431203796|gb|ELF02386.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE111]
gi|431204693|gb|ELF03251.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE116]
gi|431207361|gb|ELF05618.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE142]
gi|431213759|gb|ELF11615.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE119]
gi|431225052|gb|ELF22261.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE143]
gi|431225241|gb|ELF22446.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE156]
gi|431230815|gb|ELF26585.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE161]
gi|431237363|gb|ELF32363.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE162]
gi|431246948|gb|ELF41191.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE169]
gi|431247140|gb|ELF41382.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE171]
gi|431252989|gb|ELF46503.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE6]
gi|431259673|gb|ELF52036.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE8]
gi|431267053|gb|ELF58586.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE9]
gi|431268362|gb|ELF59836.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE17]
gi|431276654|gb|ELF67674.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE18]
gi|431278566|gb|ELF69556.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE45]
gi|431286362|gb|ELF77188.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE23]
gi|431286851|gb|ELF77671.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE42]
gi|431295828|gb|ELF85560.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE43]
gi|431300631|gb|ELF90182.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE29]
gi|431305615|gb|ELF93936.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE22]
gi|431312008|gb|ELG00156.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE46]
gi|431313380|gb|ELG01353.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE48]
gi|431319278|gb|ELG06962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE50]
gi|431320738|gb|ELG08368.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE54]
gi|431330863|gb|ELG18127.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE59]
gi|431332057|gb|ELG19300.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE63]
gi|431342016|gb|ELG29012.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE65]
gi|431342482|gb|ELG29461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE78]
gi|431345873|gb|ELG32787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE79]
gi|431351309|gb|ELG38099.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE84]
gi|431357441|gb|ELG44108.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE101]
gi|431357851|gb|ELG44517.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE91]
gi|431368952|gb|ELG55183.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE115]
gi|431370758|gb|ELG56551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE118]
gi|431375269|gb|ELG60613.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE123]
gi|431380187|gb|ELG65087.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE135]
gi|431388655|gb|ELG72378.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE136]
gi|431391889|gb|ELG75493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE140]
gi|431397252|gb|ELG80708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE141]
gi|431402564|gb|ELG85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE144]
gi|431405200|gb|ELG88443.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE147]
gi|431408148|gb|ELG91340.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE146]
gi|431413553|gb|ELG96318.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE154]
gi|431419991|gb|ELH02325.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE158]
gi|431425505|gb|ELH07575.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE165]
gi|431430034|gb|ELH11868.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE192]
gi|431437415|gb|ELH18925.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE194]
gi|431447198|gb|ELH27940.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE190]
gi|431447442|gb|ELH28174.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE173]
gi|431449533|gb|ELH30106.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE175]
gi|431454778|gb|ELH35136.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE183]
gi|431456807|gb|ELH37150.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE184]
gi|431463011|gb|ELH43205.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE196]
gi|431470700|gb|ELH50597.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE197]
gi|431475909|gb|ELH55713.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE203]
gi|431478716|gb|ELH58461.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE202]
gi|431482263|gb|ELH61966.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE209]
gi|431485751|gb|ELH65408.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE207]
gi|431496562|gb|ELH76145.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE211]
gi|431498787|gb|ELH77972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE217]
gi|431506266|gb|ELH84864.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE215]
gi|431509566|gb|ELH87815.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE218]
gi|431514220|gb|ELH92062.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE223]
gi|431517284|gb|ELH94806.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE227]
gi|431519383|gb|ELH96835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE229]
gi|431535946|gb|ELI12281.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE104]
gi|431537563|gb|ELI13680.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE105]
gi|431541069|gb|ELI16519.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE106]
gi|431545989|gb|ELI20632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE109]
gi|431555549|gb|ELI29389.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE113]
gi|431560180|gb|ELI33701.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE112]
gi|431560390|gb|ELI33904.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE117]
gi|431572897|gb|ELI45721.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE120]
gi|431574218|gb|ELI47000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE124]
gi|431575871|gb|ELI48594.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE122]
gi|431588358|gb|ELI59643.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE125]
gi|431591180|gb|ELI62180.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE128]
gi|431593673|gb|ELI63965.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE129]
gi|431601212|gb|ELI70729.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE131]
gi|431606029|gb|ELI75413.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE133]
gi|431610203|gb|ELI79504.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE137]
gi|431615213|gb|ELI84343.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE138]
gi|431619874|gb|ELI88771.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE139]
gi|431622851|gb|ELI91536.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE145]
gi|431631766|gb|ELJ00072.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE150]
gi|431634596|gb|ELJ02837.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE148]
gi|431636888|gb|ELJ05007.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE153]
gi|431649335|gb|ELJ16693.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE157]
gi|431650108|gb|ELJ17445.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE160]
gi|431651635|gb|ELJ18874.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE163]
gi|431663400|gb|ELJ30162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE166]
gi|431665035|gb|ELJ31762.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE167]
gi|431666687|gb|ELJ33314.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE168]
gi|431676787|gb|ELJ42870.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE174]
gi|431678637|gb|ELJ44633.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE176]
gi|431682066|gb|ELJ47835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE177]
gi|431692289|gb|ELJ57727.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE179]
gi|431694181|gb|ELJ59566.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE180]
gi|431696252|gb|ELJ61439.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE232]
gi|431709788|gb|ELJ74236.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE88]
gi|431710588|gb|ELJ74962.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE82]
gi|431711866|gb|ELJ76173.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE85]
gi|431721843|gb|ELJ85835.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE90]
gi|431725793|gb|ELJ89632.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE94]
gi|431726374|gb|ELJ90184.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE95]
gi|431733143|gb|ELJ96584.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE97]
gi|431736022|gb|ELJ99364.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
KTE99]
gi|441609774|emb|CCP94813.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441655107|emb|CCQ00170.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|441712013|emb|CCQ07478.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
Nissle 1917]
gi|443420972|gb|AGC85876.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O78]
gi|444542453|gb|ELV21811.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0814]
gi|444550931|gb|ELV28949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 09BKT078844]
gi|444551798|gb|ELV29674.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0815]
gi|444565090|gb|ELV41991.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0839]
gi|444567160|gb|ELV43930.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0816]
gi|444571479|gb|ELV47961.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0848]
gi|444582364|gb|ELV58158.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1753]
gi|444585162|gb|ELV60742.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1775]
gi|444586123|gb|ELV61644.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1793]
gi|444600469|gb|ELV75305.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA11]
gi|444608386|gb|ELV82919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1805]
gi|444614923|gb|ELV89148.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA13]
gi|444615589|gb|ELV89793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA19]
gi|444623578|gb|ELV97498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA2]
gi|444632670|gb|ELW06225.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA48]
gi|444632891|gb|ELW06440.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA47]
gi|444637804|gb|ELW11169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA8]
gi|444647984|gb|ELW20940.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 7.1982]
gi|444650090|gb|ELW22942.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1781]
gi|444654180|gb|ELW26874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.1762]
gi|444663161|gb|ELW35406.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli PA35]
gi|444667434|gb|ELW39472.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 3.4880]
gi|444672857|gb|ELW44543.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 95.0083]
gi|444674580|gb|ELW46110.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0670]
gi|449322675|gb|EMD12658.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O08]
gi|449324923|gb|EMD14843.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SEPT362]
gi|449324967|gb|EMD14886.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S17]
Length = 207
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|398798176|ref|ZP_10557477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
gi|398100893|gb|EJL91121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
GM01]
Length = 207
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A+H GK+ E+I
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S EAVEYG++D +L
Sbjct: 179 ERDTERDRFLSAGEAVEYGLVDSIL 203
>gi|397167167|ref|ZP_10490610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
gi|396091313|gb|EJI88880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
radicincitans DSM 16656]
Length = 207
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ + EAV+YG++D +L
Sbjct: 174 SLEQIERDTERDRFLAAQEAVDYGLVDSIL 203
>gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
Length = 196
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLQGEINDHTASLIVAQLLFLEAENPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+C+G A A LL +GAKG R ALP + IMI QP+G +
Sbjct: 72 VTSGFAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K EL K+ A++ G++ +IE D R + S EA++YG+IDKVL
Sbjct: 132 GQATDIEIHAKEILRMKKELNKILAENTGQSVRKIEKDTERDFFMSAEEAMKYGLIDKVL 191
>gi|170767754|ref|ZP_02902207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
gi|170123242|gb|EDS92173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
Length = 207
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|417230125|ref|ZP_12031711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
gi|386206615|gb|EII11121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 5.0959]
Length = 207
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAIHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|419389854|ref|ZP_13930693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|419395026|ref|ZP_13935811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|419400377|ref|ZP_13941111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|419405549|ref|ZP_13946253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|419411043|ref|ZP_13951716.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
gi|378244656|gb|EHY04598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15A]
gi|378251878|gb|EHY11774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15B]
gi|378252208|gb|EHY12102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15C]
gi|378257938|gb|EHY17774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15D]
gi|378261234|gb|EHY21029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC15E]
Length = 207
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G++ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D +L
Sbjct: 181 DTERDRFLSAPEAVEYGLVDSIL 203
>gi|238751006|ref|ZP_04612502.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
gi|238710696|gb|EEQ02918.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S +AVEYG++D V
Sbjct: 181 DTERDRFLSAEQAVEYGLVDSVF 203
>gi|440229732|ref|YP_007343525.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
gi|440051437|gb|AGB81340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens FGI94]
Length = 207
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 122/203 (60%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K I+LYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PDKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ NVKA + +L AKH G+ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILNVKARMNELMAKHTGQPLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + E+VEYG++D +L
Sbjct: 181 DTERDRFMTAEESVEYGLVDGIL 203
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 22 DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLESEDPDKDIHLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y++P + T+CVG A A++LL AGAKG R ALP S +MI QP+G +
Sbjct: 74 VSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRFALPHSRVMIHQPLGGAQ 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ V+ E+ ++ A H GK PE I+ D R Y + EA+ YG+ID+V+
Sbjct: 134 GQATDIEIHAREILRVREEMNQILAAHTGKDPETIKLDTERDHYLTADEALSYGLIDQVV 193
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+CVG A A+LL AGAKG R ALPSS IMI QP+G +
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +KA+L +L KH ++ E++E D R + SEA YGIID++
Sbjct: 133 GQATDIEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMGASEAKAYGIIDEI 191
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 112/182 (61%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K +L +L AK+ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDKLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|429083886|ref|ZP_19146912.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
gi|426547240|emb|CCJ72953.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
condimenti 1330]
Length = 189
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 14 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M +++P + T+C+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 66 ITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VKA + +L A+H G+ EQIE D R ++ S SEAVEYG++D ++
Sbjct: 126 GQATDIEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSASEAVEYGLVDSIM 185
>gi|238919011|ref|YP_002932525.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
gi|259585951|sp|C5BCJ6.1|CLPP_EDWI9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238868579|gb|ACR68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
Length = 206
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSDQRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A +
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGS 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LL AGA+G R LP+S +MI QP+G +GQATD+EI KE+ ++KA + L AKH G+
Sbjct: 114 FLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQP 173
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R ++ S +AVEYG++D VL
Sbjct: 174 IEVIERDTERDRFMSAQDAVEYGLVDAVL 202
>gi|451967071|ref|ZP_21920318.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
gi|451314224|dbj|GAC65680.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
NBRC 105688]
Length = 206
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
S+ + +P + +V T+ + D+ S L K RI++L + LI+A+ L
Sbjct: 2 SYSDQRELAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQML 61
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A +
Sbjct: 62 FLEAENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGS 113
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LL AGA+G R LP+S +MI QP+G +GQATD+EI KE+ ++KA + L AKH G+
Sbjct: 114 FLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQP 173
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R ++ S EAV+YG++D VL
Sbjct: 174 LEVIERDTERDRFMSAQEAVDYGLVDAVL 202
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 8/208 (3%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
F + + R+P + ++ T+ + D+ S L K RI++L + LI+A+ L+
Sbjct: 12 FLRFRIRNPKMAVIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLF 71
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A A
Sbjct: 72 LESEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAF 123
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL GAKG R ALP + +MI QP+G GQATD++I +E+ +K L K A H G+
Sbjct: 124 LLSGGAKGKRFALPHARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTKRMAGHSGQPF 183
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E++ AD R + S EA EYG+IDKVL
Sbjct: 184 EKVAADTERDNFMSAFEAAEYGLIDKVL 211
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 9/197 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + + LI+A+FL+L+ ED EK I YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPEKDISFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ALLL AG KG R ALP+S IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPNSRIMIHQPLGGTQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K L ++ + H G+ E++ AD R + S +EA++YGI+DKV+
Sbjct: 131 GQATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFFMSATEAMKYGIVDKVV 190
Query: 275 YTEKSPEDHGVVSDLKK 291
T++S + +D K
Sbjct: 191 -TDRSELEEDTDNDASK 206
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392940442|ref|ZP_10306086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|392292192|gb|EIW00636.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter siderophilus SR4]
Length = 195
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP+G ++
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L K+ A++ G+ E+I+AD R + EA YGIID+VL
Sbjct: 131 GQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEEAKAYGIIDEVL 190
Query: 275 YTEK 278
K
Sbjct: 191 IRNK 194
>gi|307108088|gb|EFN56329.1| hypothetical protein CHLNCDRAFT_144777 [Chlorella variabilis]
Length = 315
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 130/211 (61%), Gaps = 29/211 (13%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVYLGM VP+VTELI+AE LYLQY+D KP+YLYINSTGTT+ GE +G+ETE AIY
Sbjct: 100 RIVYLGMPLVPAVTELIIAEMLYLQYKDRTKPMYLYINSTGTTRADGETVGFETEGTAIY 159
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI----EGQAT 218
D M +VK + T+ VG A G++ +LL AG KG R L +T M+ QP R+ + QA
Sbjct: 160 DTMCFVKNEVHTVGVGVAIGQSCMLLSAGEKGKRFMLEHATAMLHQP--RVPPTGQRQAI 217
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIE-----------------ADIRRPKYFSP 261
+++I +E+ K ++ + ++ G +P++++ D++RP Y P
Sbjct: 218 EIQIKWREVLAQKQNMLAILSRTTGHSPDKLDKASAAGGGWWPGLALGAGDMQRPLYMQP 277
Query: 262 SEAVEYGIIDKVLYTEKSPEDHGVVSDLKKA 292
++A+ YG+ID V+ EK ++ D+K A
Sbjct: 278 ADALAYGVIDGVVTPEKK-----IIDDVKSA 303
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L AK+ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSKEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L K+ ++ G++ EQIE D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAATHILKTRAKLNKILSERTGQSIEQIEKDTDRDNFLTADEAKEYGLIDEVM 190
Query: 275 YTEK 278
EK
Sbjct: 191 QPEK 194
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L AK+ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|183220373|ref|YP_001838369.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910487|ref|YP_001962042.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775163|gb|ABZ93464.1| Protease subunit of endopeptidase Clp [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778795|gb|ABZ97093.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 200
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 119/204 (58%), Gaps = 9/204 (4%)
Query: 77 ITMVIPFTS-GTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ ++P+ S T+ D+ S L ++RI++LG + + A+ L+L+ E+ ++
Sbjct: 1 MSTLLPYVSEQTSRGIDRMDVYSRLLRDRIIFLGAGIDDTYANAVCAQLLFLEAENPDRD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G GY + AIYD M +KP + TLC+G A AALLL GAKG
Sbjct: 61 IYLYINSPG--------GYVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R+ALP+ IM+ QP G GQA+D+EI+ KE+ K L+ LY KH GK QI+ D R
Sbjct: 113 RSALPNGRIMMHQPYGGAGGQASDIEISAKEIIKTKNTLIDLYCKHIGKPAAQIQKDTER 172
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKS 279
+ S EA EYGIID V+ K
Sbjct: 173 NFFMSAEEAKEYGIIDNVILERKQ 196
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L AK+ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|157370220|ref|YP_001478209.1| ATP-dependent Clp protease proteolytic subunit [Serratia
proteamaculans 568]
gi|157321984|gb|ABV41081.1| Endopeptidase Clp [Serratia proteamaculans 568]
Length = 197
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+L + E++ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 23 DIYSRLLRDRIVFLNGEVNDQIAEVLCAQLLFLEAENPEKPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+ P+ TLC+G A + LL AG G+R LP++++ + QP+G +
Sbjct: 75 ITSGFAIYDTMNYINAPVHTLCMGTARSMGSFLLMAGEAGHRMVLPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EMK K ++ LYAKH G++ E++E + R + S EAVE+G++DKVL
Sbjct: 135 GQASDILIHAEEMKRTKHSVITLYAKHCGRSYEEVERALDRDHFMSADEAVEWGLVDKVL 194
>gi|417331694|ref|ZP_12115851.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353584568|gb|EHC44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
Length = 194
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 131 GQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|449478766|ref|XP_004155413.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL-G 153
DL + L RI+YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT +L G
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IGR 212
ETEA+AI D+M Y K ++T+ + A+G+AA+LL G KG RA P+++ + P +
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNN 277
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
G A D+ I KE+ ++L AK GK E+I DI+ KYF P EA++YGI DK
Sbjct: 278 SSGSAIDMWIKAKELDANTEYYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIADK 337
Query: 273 VLYTEKSPED 282
++ PED
Sbjct: 338 II----KPED 343
>gi|449438329|ref|XP_004136941.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Cucumis sativus]
Length = 381
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL-G 153
DL + L RI+YLGM VP+VTELI+A+F++L Y++ KPIYLYINS+GT +L G
Sbjct: 158 DLPTLLLDARIIYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYLYINSSGTQDENRELVG 217
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IGR 212
ETEA+AI D+M Y K ++T+ + A+G+AA+LL G KG RA P+++ + P +
Sbjct: 218 SETEAYAIADMMSYCKSDVYTINLAMAYGQAAMLLSLGTKGYRALQPNASTKLYLPKVNN 277
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
G A D+ I KE+ ++L AK GK E+I DI+ KYF P EA++YGI DK
Sbjct: 278 SSGSAIDMWIKAKELDANTEYYLELLAKGIGKPKEEINKDIQLSKYFKPQEAIDYGIADK 337
Query: 273 VLYTEKSPED 282
++ PED
Sbjct: 338 II----KPED 343
>gi|238759262|ref|ZP_04620429.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
gi|238702549|gb|EEP95099.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
Length = 194
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S +AVEYG++D V
Sbjct: 131 GQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAQQAVEYGLVDSVF 190
>gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
Length = 196
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V+ +I+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLQGEINDHVSSIIVAQMLFLEAENPEKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP + IMI QP+G +
Sbjct: 72 VTSGMAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K EL K+ A++ G++ +IE D R + S EA++YG+IDKVL
Sbjct: 132 GQATDIEIHAKEILRMKKELNKILAENTGQSVRKIERDTERDFFMSAEEAMKYGLIDKVL 191
Query: 275 YTEKS 279
S
Sbjct: 192 KKRDS 196
>gi|220934115|ref|YP_002513014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995425|gb|ACL72027.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 216
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 8/198 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++ + +I+A+ L+L+ E+ +K I LYINS G
Sbjct: 27 TARGERAYDIYSRLLKERVIFAVGPVEDYMANVIVAQLLFLESENPDKDISLYINSPG-- 84
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + TLC+G A A+LL GAKG R LP S +MI
Sbjct: 85 ------GAVTAGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFCLPHSRVMI 138
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQATD++I +E+ V+AEL ++ A H G++ EQIE D R ++ +P EA E
Sbjct: 139 HQPLGGFQGQATDIDIHAREILKVRAELNRILAHHTGQSIEQIEQDTERDRFLNPVEAAE 198
Query: 267 YGIIDKVLYTEKSPEDHG 284
YG+ID+VL + + E G
Sbjct: 199 YGLIDQVLSSREMAEQAG 216
>gi|145350809|ref|XP_001419790.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580022|gb|ABO98083.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
Query: 93 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEK 151
PPDL S L RI Y+GMS VP+VTEL++AE LYL YE EKP Y+YINS G+ + GE
Sbjct: 147 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEV 206
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-I 210
+G + EA+AI D M Y++P I T+ VG G A+L+L AG KG R ALP I + P +
Sbjct: 207 VGMDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKL 266
Query: 211 GRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
R +V+I E + + ++ GK + + D+ R +YF+P++A+EYG+I
Sbjct: 267 NRTFDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVRKDLDRTRYFTPNQAIEYGLI 326
Query: 271 DKVL 274
DKV+
Sbjct: 327 DKVI 330
>gi|300721991|ref|YP_003711271.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
gi|297628488|emb|CBJ89055.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
Length = 207
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K +P +++V TA + D+ S L K+RI++L + LI+A+ L+L+
Sbjct: 6 KQDQYAPNMSLVPMVVEQTARGERAFDIYSRLLKDRIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL
Sbjct: 66 AENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGA+G R LP+S +MI QP+G +GQATD++I +E+ VKA + +L AKH G+ ++
Sbjct: 118 AAGAEGKRFCLPNSRVMIHQPLGGFQGQATDIQIHAQEILKVKARMNELMAKHTGQPLDK 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
IE D R ++ S SEAV+YG++D + +T+++
Sbjct: 178 IEEDTERDRFLSASEAVDYGLVDSI-FTQRN 207
>gi|303248988|ref|ZP_07335234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
gi|302489637|gb|EFL49575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
Length = 204
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + V LI A+ L+L+ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSAVDDYVANLICAQLLFLESEDPEKEISLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M YV PP+ TLC+G A ALLL AGA G R ALP S IMI QP G +
Sbjct: 71 VSAGLAIYDTMQYVMPPVSTLCMGQAASMGALLLCAGATGTRYALPHSRIMIHQPSGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E + + L ++ AKH G+ E+I+ D R + S EAV YG++DKV
Sbjct: 131 GQATDIEIHARETRRTREALNEIMAKHTGQPIEKIQVDTERDNFMSAEEAVAYGLVDKVF 190
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|428784402|ref|ZP_19001893.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
gi|426275964|gb|EKV53691.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ACW56400]
Length = 207
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP+S +MI QP+G +GQA+D++I +E+ K + +L AKH G+T E I
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIENI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SE+VEYG++D VL
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVL 203
>gi|260596809|ref|YP_003209380.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
gi|260215986|emb|CBA28638.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
Length = 214
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 19 PHMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAEN 75
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M +++P + T+C+G A A LL AG
Sbjct: 76 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAG 127
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+ EQIE
Sbjct: 128 TKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIER 187
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D ++
Sbjct: 188 DTERDRFLSAGEAVEYGLVDSIM 210
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 117/197 (59%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +P TA + D+ S L + RIV++G + L++A+ L+L+ ED ++ I
Sbjct: 1 MYVPIVIEQTARGERAYDIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDIT 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP I TLC+G A AA+LL G KG R
Sbjct: 61 LYINSPG--------GIVTSGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP S IM+ QPIG +GQATDV+I +E+ ++A L ++ A H G+ EQI+ D R
Sbjct: 113 ALPHSRIMLHQPIGSFQGQATDVDIQAREILRLRAMLNEILANHTGQPIEQIQKDTERDF 172
Query: 258 YFSPSEAVEYGIIDKVL 274
Y S EA +YG+IDK+L
Sbjct: 173 YMSSEEAQKYGVIDKIL 189
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 LIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP++ +MI QP+G GQATD+EI +E+ +K L + A+H G+ E++ AD R
Sbjct: 112 RFALPNARVMIHQPLGGARGQATDIEIHAREILKLKEMLTRKMAEHSGQPFEKLAADTER 171
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S +EA+EYG+IDKVL
Sbjct: 172 DNFMSATEAMEYGLIDKVL 190
>gi|238788008|ref|ZP_04631804.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
gi|238723956|gb|EEQ15600.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
Length = 194
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S +AVEYG++D V
Sbjct: 131 GQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQAVEYGLVDSVF 190
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 121/204 (59%), Gaps = 9/204 (4%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG V L++A+ L+L+ ED +K
Sbjct: 6 IIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDK 65
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
+YLYINS G G T AIYD M Y+K + T+CVG A AA+LL AGAKG
Sbjct: 66 DVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKG 117
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP++ IMI QP+G EG A DVEI +E+ +K L ++ +KH G+ E+IE D
Sbjct: 118 KRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTD 177
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEK 278
R + S EA EYGI+DKV+ T +
Sbjct: 178 RDFFMSAEEAKEYGIVDKVVSTRE 201
>gi|389841946|ref|YP_006344030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|417791995|ref|ZP_12439407.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|424798413|ref|ZP_18223955.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|429092459|ref|ZP_19155087.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|429099391|ref|ZP_19161497.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|429102778|ref|ZP_19164752.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|429107667|ref|ZP_19169536.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|429109245|ref|ZP_19171015.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|429114393|ref|ZP_19175311.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|449309236|ref|YP_007441592.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
gi|333953883|gb|EGL71773.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii E899]
gi|387852422|gb|AFK00520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cronobacter
sakazakii ES15]
gi|423234134|emb|CCK05825.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 696]
gi|426285731|emb|CCJ87610.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 582]
gi|426289427|emb|CCJ90865.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis 564]
gi|426294390|emb|CCJ95649.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 681]
gi|426310402|emb|CCJ97128.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
malonaticus 507]
gi|426317522|emb|CCK01424.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 701]
gi|426742658|emb|CCJ81200.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
dublinensis 1210]
gi|449099269|gb|AGE87303.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii SP291]
Length = 207
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E+
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M +++P + T+C+G A A LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+ EQIE
Sbjct: 121 TKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAVEYG++D ++
Sbjct: 181 DTERDRFLSAGEAVEYGLVDSIM 203
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V+ LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP+S IMI QP G +
Sbjct: 72 ITAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMIHQPWGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A D+EI +E+ +K L K+ ++H GK QIE D R + S EA EYG+IDKV+
Sbjct: 132 GTAKDIEIQAQEILRMKKMLNKILSEHTGKDVSQIEKDADRDFFMSAEEAKEYGLIDKVI 191
Query: 275 YTEK 278
+ K
Sbjct: 192 KSRK 195
>gi|345017119|ref|YP_004819472.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344032462|gb|AEM78188.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 195
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 118/184 (64%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP+G ++
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L K+ A++ G+ E+I+AD R + +A YGIID+VL
Sbjct: 131 GQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIIDEVL 190
Query: 275 YTEK 278
+K
Sbjct: 191 VRKK 194
>gi|354598750|ref|ZP_09016767.1| ATP-dependent Clp protease proteolytic subunit [Brenneria sp.
EniD312]
gi|353676685|gb|EHD22718.1| ATP-dependent Clp protease proteolytic subunit [Brenneria sp.
EniD312]
Length = 207
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ + ++P + +V T+ + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 6 EQETQAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDYMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL
Sbjct: 66 AENPEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI KE+ VKA + +L AKH G+ E
Sbjct: 118 AAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELLAKHTGQPLEV 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ S +EAV+YG++D V
Sbjct: 178 IERDTERDRFLSANEAVDYGLVDSVF 203
>gi|386617931|ref|YP_006137511.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NA114]
gi|333968432|gb|AEG35237.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NA114]
Length = 207
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIPQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|421492899|ref|ZP_15940258.1| hypothetical protein MU9_1428 [Morganella morganii subsp. morganii
KT]
gi|400193004|gb|EJO26141.1| hypothetical protein MU9_1428 [Morganella morganii subsp. morganii
KT]
Length = 262
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 139/245 (56%), Gaps = 19/245 (7%)
Query: 41 SPFANGSVSSDFSGLRLRPDCLNPD---SFCKSK----PRSPVITMVIPFTSGTAWEQPP 93
S +++ +SS +G+R P N + S+ ++ P ++ MVI TS +
Sbjct: 30 SAWSSHRISSKITGIRQAPIKFNQEMDMSYHDNQDTFAPNMALVPMVIEQTSRG---ERS 86
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLG 153
D+ S L K+RI++L + LI+A+ L+L+ E+ EK I LYINS G G
Sbjct: 87 YDIYSRLLKDRIIFLTGQVEDHMANLIVAQLLFLEAENPEKDISLYINSPG--------G 138
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI 213
T +IYD M ++KP + T+CVG A + LL AGA G R LP+S +MI QP+G
Sbjct: 139 VITAGMSIYDTMQFIKPQVSTICVGQACSMGSFLLAAGAPGKRYCLPNSRVMIHQPLGGY 198
Query: 214 EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
+GQATD+EI +E+ VKA + L A H GK+ E+I+ D R ++ S EA EYG++D +
Sbjct: 199 QGQATDIEIHAQEILKVKARMNDLLAHHTGKSVEEIQRDTERDRFLSAKEAQEYGLVDHI 258
Query: 274 LYTEK 278
YT +
Sbjct: 259 -YTHR 262
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
Length = 194
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
MVIP+ T+ + D+ S L K+RIV L +V I+A+ L+L+ ED +K IY
Sbjct: 1 MVIPYVIEQTSRGERSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T F+IYD M Y+KP + T+C+G A A LL GAKG R
Sbjct: 61 LYINSPG--------GVVTSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLSCGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S IMI QP+G +GQATD+EI KE+ +K L + +++ GK Q+E D R
Sbjct: 113 ALPNSRIMIHQPLGGAQGQATDIEIQAKEILRMKEILNGILSQNSGKDLAQVEKDTDRDF 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S +AV+YG+ID+VL
Sbjct: 173 FMSAEDAVQYGLIDQVL 189
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease proteolytic subunit [Geobacter daltonii
FRC-32]
gi|254763790|sp|B9M0Y1.1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
daltonii FRC-32]
Length = 199
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG + +V+ L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +S IMI QP+G +GQATD+ I +E+ +K +L +L A+H G+T E+IEAD R
Sbjct: 113 SLANSRIMIHQPLGGFQGQATDIHIHAQEILRMKKKLNELLAEHSGQTVEKIEADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S +A YGIID ++
Sbjct: 173 FMSGEDAKTYGIIDSII 189
>gi|259909254|ref|YP_002649610.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP+S +MI QP+G +GQA+D++I +E+ K + +L AKH G+T E I
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SE+VEYG++D VL
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVL 203
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4.1|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533.1|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP+G ++
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L K+ A++ G+ E+I+AD R + +A YGIID+VL
Sbjct: 131 GQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDAKAYGIIDEVL 190
Query: 275 YTEK 278
K
Sbjct: 191 IRNK 194
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M IPF T+ + DL S L K+RI+ LG+ V +++A+ L+L+ ED EK I
Sbjct: 1 MNIPFVIETSHRGERAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T AIYD M YVK P+ T+CVG A ALLL AG+KG R
Sbjct: 61 IYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ IMI QP+G +GQATD++I KE+ +KA L + KH G T E+IE D R
Sbjct: 113 ALPNARIMIHQPLGGAQGQATDIDIQAKEILRLKAYLNGIIVKHTGHTIERIEKDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S +A +YGIID+V+
Sbjct: 173 FMSADDARQYGIIDEVV 189
>gi|448240808|ref|YP_007404861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
gi|445211172|gb|AGE16842.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
marcescens WW4]
Length = 207
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQPLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + EAVEYG++D +L
Sbjct: 181 DTERDRFMTADEAVEYGLVDGIL 203
>gi|363807834|ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 7/177 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE + LQY D ++ I++YINSTGTT+ GE +G ETE FAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIY 181
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQ----AT 218
D M +K I T+ VG+A G+A LLL AG G R +P + MI+QP RI A+
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQP--RIPSSGLMPAS 239
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
DV I KE+ + LVKL AKH G + E + ++RP Y + A E+G+ID++L+
Sbjct: 240 DVLIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILW 296
>gi|433324497|ref|ZP_20401784.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
gi|432347011|gb|ELL41475.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
J96]
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MVI TS + D+ S L K R+++L + LI+A+
Sbjct: 8 DNFA---PHMALVPMVIEQTS---RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA D+EI +E+ VK + +L A H G+
Sbjct: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQANDIEIHAREILKVKGRMNELMALHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ EQIE D R ++ S EAVEYG++D +L
Sbjct: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 118/204 (57%), Gaps = 9/204 (4%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP T + D+ S L K+RI++LG + +++A+ L+L E+ ++ IYL
Sbjct: 3 VIPVVIEQTGRGERSYDIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G GY + AIYD M Y+K + TLCVG A AALLL GAKG R+A
Sbjct: 63 YINSPG--------GYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSA 114
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LP S IM+ QP G GQA+D+ I KE+ +K L LY KH GK EQI+ D R Y
Sbjct: 115 LPHSRIMMHQPTGGATGQASDIAIQAKEVLKLKEILNGLYTKHTGKPIEQIQKDTERDLY 174
Query: 259 FSPSEAVEYGIIDKVLYTEKSPED 282
+ EA YGIID V+ E++ ++
Sbjct: 175 MTAEEAQIYGIIDSVISIERNTKN 198
>gi|251797042|ref|YP_003011773.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247544668|gb|ACT01687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 116/182 (63%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V I+A+ L+L ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGSAIDDQVANSIVAQLLFLAAEDPDKEISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+CVG A AA+LL +GAKG R ALPSS +MI QP G +
Sbjct: 72 TTAGFAIYDTMQYIKPEVHTICVGMAASFAAILLLSGAKGKRFALPSSEVMIHQPHGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I+ K + + +A L ++ A G+ E+IE D+ R + S EA++YGIID+V+
Sbjct: 132 GQASDIAISAKRILDTRARLNRIAADRTGQPLEKIEKDMDRDYFLSAQEALDYGIIDQVV 191
Query: 275 YT 276
+T
Sbjct: 192 HT 193
>gi|387872212|ref|YP_005803593.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 21 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 77
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 78 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 129
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP+S +MI QP+G +GQA+D++I +E+ K + +L AKH G+T E I
Sbjct: 130 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 189
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SE+VEYG++D VL
Sbjct: 190 ERDTNRDRFLSASESVEYGLVDSVL 214
>gi|188534634|ref|YP_001908431.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 10 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 67 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP+S +MI QP+G +GQA+D++I +E+ K + +L AKH G+T E I
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 178
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SE+VEYG++D VL
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVL 203
>gi|442323969|ref|YP_007363990.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441491611|gb|AGC48306.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 203
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 120/201 (59%), Gaps = 9/201 (4%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S IMI QP+G +GQATD++I KE+ +++ L L KH G + E+IE D R
Sbjct: 113 ALPNSRIMIHQPLGGAQGQATDIDIQAKEILRLRSYLNGLIVKHTGHSIERIEKDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
+ S +A +YGIID+V+ ++
Sbjct: 173 FMSAEDARQYGIIDEVVEKQQ 193
>gi|60389557|sp|Q6AK59.2|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 115/197 (58%), Gaps = 13/197 (6%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++LG V +I+A+ L+L+ ED EK I YINS G
Sbjct: 9 EQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDITFYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M Y+K I TLC+G A A+LL AG G R ALP+S I
Sbjct: 69 --------GSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRI 120
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
MI QP+G +GQATD+EI KE+ ++ +L + A H GKT ++IE+D R + S EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEA 180
Query: 265 VEYGIIDKVLYTEKSPE 281
+YG+ID+VL + E
Sbjct: 181 QKYGLIDEVLVKREDVE 197
>gi|385787570|ref|YP_005818679.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 18 TAPHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 74
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 75 ENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 126
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP+S +MI QP+G +GQA+D++I +E+ K + +L AKH G+T E I
Sbjct: 127 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 186
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R ++ S SE+VEYG++D VL
Sbjct: 187 ERDTNRDRFLSASESVEYGLVDSVL 211
>gi|85058649|ref|YP_454351.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
gi|84779169|dbj|BAE73946.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 14/210 (6%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
D+F P ++ MV+ TS + D+ S L K RI+++ + LI+A+
Sbjct: 8 DNFA---PHMALVPMVVEQTS---RGERSYDIFSRLLKERIIFMTGQVEDHMANLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
++L+ E+ EK IYLYINS G G T +IYD M ++KP + T C+G A
Sbjct: 62 MFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTFCMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L AKH G+
Sbjct: 114 AFLLAAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKARMNELMAKHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R ++ S EAV+YG++D VL
Sbjct: 174 PLEVIERDTERDRFLSAPEAVDYGLVDSVL 203
>gi|3318853|pdb|1TYF|A Chain A, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318854|pdb|1TYF|B Chain B, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318855|pdb|1TYF|C Chain C, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318856|pdb|1TYF|D Chain D, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318857|pdb|1TYF|E Chain E, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318858|pdb|1TYF|F Chain F, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318859|pdb|1TYF|G Chain G, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318860|pdb|1TYF|H Chain H, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318861|pdb|1TYF|I Chain I, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318862|pdb|1TYF|J Chain J, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318863|pdb|1TYF|K Chain K, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318864|pdb|1TYF|L Chain L, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318865|pdb|1TYF|M Chain M, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318866|pdb|1TYF|N Chain N, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|93278456|pdb|1YG6|A Chain A, Clpp
gi|93278457|pdb|1YG6|B Chain B, Clpp
gi|93278458|pdb|1YG6|C Chain C, Clpp
gi|93278459|pdb|1YG6|D Chain D, Clpp
gi|93278460|pdb|1YG6|E Chain E, Clpp
gi|93278461|pdb|1YG6|F Chain F, Clpp
gi|93278462|pdb|1YG6|G Chain G, Clpp
gi|93278463|pdb|1YG6|H Chain H, Clpp
gi|93278464|pdb|1YG6|I Chain I, Clpp
gi|93278465|pdb|1YG6|J Chain J, Clpp
gi|93278466|pdb|1YG6|K Chain K, Clpp
gi|93278467|pdb|1YG6|L Chain L, Clpp
gi|93278468|pdb|1YG6|M Chain M, Clpp
gi|93278469|pdb|1YG6|N Chain N, Clpp
gi|109157730|pdb|2FZS|A Chain A, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157731|pdb|2FZS|B Chain B, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157732|pdb|2FZS|C Chain C, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157733|pdb|2FZS|D Chain D, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157734|pdb|2FZS|E Chain E, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157735|pdb|2FZS|F Chain F, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157736|pdb|2FZS|G Chain G, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157737|pdb|2FZS|H Chain H, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157738|pdb|2FZS|I Chain I, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157739|pdb|2FZS|J Chain J, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157740|pdb|2FZS|K Chain K, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157741|pdb|2FZS|L Chain L, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157742|pdb|2FZS|M Chain M, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157743|pdb|2FZS|N Chain N, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
Length = 193
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 70 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 130 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|300900508|ref|ZP_07118675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300924164|ref|ZP_07140156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300937054|ref|ZP_07151920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300958005|ref|ZP_07170169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300988008|ref|ZP_07178488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300997374|ref|ZP_07181714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|301022569|ref|ZP_07186441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|301049644|ref|ZP_07196593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|301301588|ref|ZP_07207723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301647363|ref|ZP_07247175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|309787029|ref|ZP_07681641.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|312964538|ref|ZP_07778794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|312970533|ref|ZP_07784714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|386612632|ref|YP_006132298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|414574650|ref|ZP_11431859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|415777142|ref|ZP_11488394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|415790316|ref|ZP_11494958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|415801142|ref|ZP_11499543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|415814597|ref|ZP_11506195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|415821038|ref|ZP_11510052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|415828317|ref|ZP_11514914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|415836283|ref|ZP_11518695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|415852351|ref|ZP_11528727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|415859379|ref|ZP_11533654.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|415862715|ref|ZP_11536155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|415873838|ref|ZP_11541011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|416895867|ref|ZP_11925751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|417579661|ref|ZP_12230483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|417585232|ref|ZP_12236012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|417590120|ref|ZP_12240840.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|417595362|ref|ZP_12246032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|417600719|ref|ZP_12251304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|417606429|ref|ZP_12256958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|417611470|ref|ZP_12261944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|417616826|ref|ZP_12267260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|417621706|ref|ZP_12272035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|417627380|ref|ZP_12277627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|417632922|ref|ZP_12283143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|417637737|ref|ZP_12287912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|417665523|ref|ZP_12315090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|417674312|ref|ZP_12323745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|417680634|ref|ZP_12330019.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|417688200|ref|ZP_12337446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|417700589|ref|ZP_12349729.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|417705975|ref|ZP_12355040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|417710994|ref|ZP_12360001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|417715955|ref|ZP_12364888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|417721425|ref|ZP_12370271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|417726776|ref|ZP_12375520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|417731925|ref|ZP_12380596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|417737258|ref|ZP_12385864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|417741876|ref|ZP_12390428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|418042554|ref|ZP_12680747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|418301288|ref|ZP_12913082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|418959268|ref|ZP_13511167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|418995654|ref|ZP_13543268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|419049039|ref|ZP_13595958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|419090429|ref|ZP_13635749.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|419146621|ref|ZP_13691317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|419348518|ref|ZP_13889871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|419805361|ref|ZP_14330499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|420273503|ref|ZP_14775836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|420345496|ref|ZP_14846928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|422355330|ref|ZP_16436046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|422356283|ref|ZP_16436972.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|422363028|ref|ZP_16443576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|422368704|ref|ZP_16449109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|422378071|ref|ZP_16458294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|422378678|ref|ZP_16458885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|424094467|ref|ZP_17830242.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|424100869|ref|ZP_17836048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|424107682|ref|ZP_17842276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|424119733|ref|ZP_17853463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|424125993|ref|ZP_17859211.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|424138622|ref|ZP_17870934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|424453616|ref|ZP_17905171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|424466383|ref|ZP_17916591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|424573298|ref|ZP_18013737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|424579253|ref|ZP_18019202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|424817252|ref|ZP_18242403.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|425107864|ref|ZP_18510132.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|425113766|ref|ZP_18515604.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|425118532|ref|ZP_18520267.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|425148284|ref|ZP_18548195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|425172154|ref|ZP_18570568.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|425184183|ref|ZP_18581822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|425190934|ref|ZP_18588075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|425203924|ref|ZP_18600068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|425271133|ref|ZP_18662647.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|425276312|ref|ZP_18667656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|425286995|ref|ZP_18677930.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|425298636|ref|ZP_18688686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|425321272|ref|ZP_18709959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|425345948|ref|ZP_18732764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|428944919|ref|ZP_19017578.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|429024267|ref|ZP_19090687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|429076828|ref|ZP_19140048.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
gi|300298581|gb|EFJ54966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|300304193|gb|EFJ58713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|300315272|gb|EFJ65056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300355989|gb|EFJ71859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300397450|gb|EFJ80988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|300407560|gb|EFJ91098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300419617|gb|EFK02928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300457885|gb|EFK21378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300843085|gb|EFK70845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301074508|gb|EFK89314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|308924607|gb|EFP70102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|310337182|gb|EFQ02320.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|312290772|gb|EFR18649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|313646936|gb|EFS11393.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|315256265|gb|EFU36233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|315289845|gb|EFU49235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|315294229|gb|EFU53580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|315299561|gb|EFU58809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|315616622|gb|EFU97239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|323153474|gb|EFZ39728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|323160452|gb|EFZ46400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|323164238|gb|EFZ50045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|323170523|gb|EFZ56173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|323178294|gb|EFZ63872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1180]
gi|323184732|gb|EFZ70103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli OK1357]
gi|323191357|gb|EFZ76620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|324010068|gb|EGB79287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|324010651|gb|EGB79870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|324016702|gb|EGB85921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|325498272|gb|EGC96131.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|327254765|gb|EGE66381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|332085596|gb|EGI90760.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|332094593|gb|EGI99639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|332098592|gb|EGJ03558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
gi|332341801|gb|AEE55135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNK88]
gi|332760728|gb|EGJ91016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 4343-70]
gi|332761448|gb|EGJ91730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2747-71]
gi|332763735|gb|EGJ93973.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-671]
gi|332768358|gb|EGJ98542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2930-71]
gi|333007966|gb|EGK27442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-218]
gi|333008123|gb|EGK27598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri VA-6]
gi|333010898|gb|EGK30324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-272]
gi|333020699|gb|EGK39959.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-227]
gi|333021875|gb|EGK41123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri K-304]
gi|339413386|gb|AEJ55058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli UMNF18]
gi|342930642|gb|EGU99364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 79-10]
gi|345341457|gb|EGW73862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_C165-02]
gi|345344081|gb|EGW76457.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_B2F1]
gi|345345293|gb|EGW77639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2534-86]
gi|345354064|gb|EGW86291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_94C]
gi|345361730|gb|EGW93888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3030-1]
gi|345365643|gb|EGW97750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_DG131-3]
gi|345365955|gb|EGW98053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_EH250]
gi|345377684|gb|EGX09615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_MHI813]
gi|345381198|gb|EGX13083.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli G58-1]
gi|345386281|gb|EGX16116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_H.1.8]
gi|345391232|gb|EGX21026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_S1191]
gi|345395481|gb|EGX25225.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TX1999]
gi|377849044|gb|EHU14020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC1A]
gi|377902535|gb|EHU66839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC3B]
gi|377950620|gb|EHV14247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC4C]
gi|378001549|gb|EHV64608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC6B]
gi|378204180|gb|EHX64596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DEC13B]
gi|383474513|gb|EID66499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W26]
gi|384377970|gb|EIE35862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli J53]
gi|384471620|gb|EIE55693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli AI27]
gi|390669796|gb|EIN46389.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 93-001]
gi|390673007|gb|EIN49260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1990]
gi|390674047|gb|EIN50254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1985]
gi|390692170|gb|EIN66868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA9]
gi|390693116|gb|EIN67756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA5]
gi|390713047|gb|EIN85990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA14]
gi|390755179|gb|EIO24727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA33]
gi|390762421|gb|EIO31679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA40]
gi|390776243|gb|EIO44194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli PA41]
gi|390925020|gb|EIP82756.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1863]
gi|390926190|gb|EIP83784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1845]
gi|391276380|gb|EIQ35152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 965-58]
gi|391289278|gb|EIQ47773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 3233-85]
gi|397786920|gb|EJK97751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_O31]
gi|408102855|gb|EKH35244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FDA504]
gi|408116882|gb|EKH48149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK1997]
gi|408122383|gb|EKH53245.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli NE1487]
gi|408132502|gb|EKH62478.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli FRIK2001]
gi|408198909|gb|EKI24120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TW15901]
gi|408207207|gb|EKI31961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ARS4.2123]
gi|408218929|gb|EKI43111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3006]
gi|408221639|gb|EKI45572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 07798]
gi|408253459|gb|EKI75053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1737]
gi|408278942|gb|EKI98609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EC1849]
gi|408560349|gb|EKK36613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 6.0172]
gi|408573157|gb|EKK49016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0566]
gi|408573670|gb|EKK49500.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 8.0569]
gi|408611153|gb|EKK84515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.0221]
gi|427217767|gb|EKV86819.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 88.1467]
gi|427292270|gb|EKW55624.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 96.0427]
gi|427334470|gb|EKW95539.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Escherichia coli 99.0713]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 131 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 190
>gi|238764860|ref|ZP_04625801.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
gi|238696967|gb|EEP89743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK+ + +L A H GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S +AVEYG++D V
Sbjct: 181 DTERDRFLSAEQAVEYGLVDSVF 203
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
Length = 202
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 11/206 (5%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
I MVI T T + D+ S L K+RI+ L + V LI A+ L+L+ ED EK I
Sbjct: 4 IPMVIETTGRT---ERAYDIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
Y+YINS G G + AIYD M Y+ P+ TLC+G A ALLL AGA+G R
Sbjct: 61 YMYINSPG--------GVVSAGMAIYDTMQYISAPVSTLCLGQAASMGALLLAAGAQGMR 112
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
ALP S IMI QP+G +GQA+D+ I KE+ ++ EL + A H G+ ++I D R
Sbjct: 113 YALPHSRIMIHQPLGGTQGQASDIHIHAKEILRLRDELNGILAGHTGQKLDKIRDDTERD 172
Query: 257 KYFSPSEAVEYGIIDKVLYTEKSPED 282
+ S EAV+YG+IDKV+++ ++
Sbjct: 173 YFMSSEEAVKYGLIDKVMHSRADAQE 198
>gi|453062436|gb|EMF03427.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
VGH107]
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK IYLYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIYLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G+ EQIE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQPLEQIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + EAVEYG++D +L
Sbjct: 181 DTERDRFMTAEEAVEYGLVDGIL 203
>gi|93278470|pdb|1YG8|A Chain A, The Structure Of A V6a Variant Of Clpp.
gi|93278471|pdb|1YG8|B Chain B, The Structure Of A V6a Variant Of Clpp.
gi|93278472|pdb|1YG8|C Chain C, The Structure Of A V6a Variant Of Clpp.
gi|93278473|pdb|1YG8|D Chain D, The Structure Of A V6a Variant Of Clpp.
gi|93278474|pdb|1YG8|E Chain E, The Structure Of A V6a Variant Of Clpp.
gi|93278475|pdb|1YG8|F Chain F, The Structure Of A V6a Variant Of Clpp.
gi|93278476|pdb|1YG8|G Chain G, The Structure Of A V6a Variant Of Clpp.
gi|93278477|pdb|1YG8|H Chain H, The Structure Of A V6a Variant Of Clpp.
gi|93278478|pdb|1YG8|I Chain I, The Structure Of A V6a Variant Of Clpp.
gi|93278479|pdb|1YG8|J Chain J, The Structure Of A V6a Variant Of Clpp.
gi|93278480|pdb|1YG8|K Chain K, The Structure Of A V6a Variant Of Clpp.
gi|93278481|pdb|1YG8|L Chain L, The Structure Of A V6a Variant Of Clpp.
gi|93278482|pdb|1YG8|M Chain M, The Structure Of A V6a Variant Of Clpp.
gi|93278483|pdb|1YG8|N Chain N, The Structure Of A V6a Variant Of Clpp.
gi|93278484|pdb|1YG8|O Chain O, The Structure Of A V6a Variant Of Clpp.
gi|93278485|pdb|1YG8|P Chain P, The Structure Of A V6a Variant Of Clpp.
gi|93278486|pdb|1YG8|Q Chain Q, The Structure Of A V6a Variant Of Clpp.
gi|93278487|pdb|1YG8|R Chain R, The Structure Of A V6a Variant Of Clpp.
gi|93278488|pdb|1YG8|S Chain S, The Structure Of A V6a Variant Of Clpp.
gi|93278489|pdb|1YG8|T Chain T, The Structure Of A V6a Variant Of Clpp.
gi|93278490|pdb|1YG8|U Chain U, The Structure Of A V6a Variant Of Clpp.
gi|93278491|pdb|1YG8|V Chain V, The Structure Of A V6a Variant Of Clpp.
gi|93278492|pdb|1YG8|W Chain W, The Structure Of A V6a Variant Of Clpp.
gi|93278493|pdb|1YG8|X Chain X, The Structure Of A V6a Variant Of Clpp.
gi|93278494|pdb|1YG8|Y Chain Y, The Structure Of A V6a Variant Of Clpp.
gi|93278495|pdb|1YG8|Z Chain Z, The Structure Of A V6a Variant Of Clpp.
gi|93278496|pdb|1YG8|AA Chain a, The Structure Of A V6a Variant Of Clpp.
gi|93278497|pdb|1YG8|BB Chain b, The Structure Of A V6a Variant Of Clpp
Length = 193
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 70 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 130 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|244539154|dbj|BAH83197.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Ishikawaella capsulata Mpkobe]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
+T++ T+ + D+ S L K R+++L + L++A+ LYL+ E+ +K I
Sbjct: 1 MTLIPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDRMANLVVAQILYLEAENPDKDI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
YLYINS G G T +IYD M ++KP + T+C+G A+ A LL AGAKG R
Sbjct: 61 YLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAYSMGAFLLTAGAKGKR 112
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
LP+S +MI QP+G +GQATD+EI +E+ VK L +L AKH GK ++IE D R
Sbjct: 113 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILQVKHRLNELIAKHTGKPLKKIEIDTERD 172
Query: 257 KYFSPSEAVEYGIIDKVL 274
++ S EAVEYG++D +L
Sbjct: 173 RFLSAKEAVEYGLVDAIL 190
>gi|115634688|ref|XP_786892.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 239
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 17/228 (7%)
Query: 47 SVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIV 106
SVSS GL R +K +P++ +VI T + D+ S L K RI+
Sbjct: 10 SVSSKLGGLCHR------SLHNGAKLHTPLVPIVI---EQTGRGERAYDIYSRLLKERII 60
Query: 107 YLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMG 166
L +V+ +++A+ L+LQ E +KPI++YINS G G T IYD M
Sbjct: 61 CLMGPVNDTVSSVVIAQLLFLQSESNKKPIHMYINSPG--------GSVTAGLGIYDSMQ 112
Query: 167 YVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKE 226
YV PPI T CVG A +LLL AGA G R +LP+S IM+ QP G+ GQATD++I +E
Sbjct: 113 YVLPPIATWCVGQACSMGSLLLTAGAPGMRHSLPNSRIMVHQPSGQAVGQATDIQIQAEE 172
Query: 227 MKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ +K ++ KLY KH G+T + IE + R + SP EA+++G+IDKVL
Sbjct: 173 IIKLKKQINKLYVKHTGQTLDVIEQAMERDHFMSPQEALQFGLIDKVL 220
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 9/202 (4%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S IMI QP+G +GQATD++I KE+ +++ + L KH G T E+IE D R
Sbjct: 113 ALPNSRIMIHQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEKS 279
+ S +A +YG+ID+V+ +++
Sbjct: 173 FMSAEDARQYGLIDEVVEKQRA 194
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 113/190 (59%), Gaps = 13/190 (6%)
Query: 90 EQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTG 144
EQ P D+ S L K RI++L ++ LI+A+ L+L+ ED EK IYLYINS G
Sbjct: 9 EQTPKGERSYDIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIYLYINSPG 68
Query: 145 TTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTI 204
G T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +
Sbjct: 69 --------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
MI QP+G GQATD++I +E+ +K L + A+H G+ E++ AD R + S EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAQEA 180
Query: 265 VEYGIIDKVL 274
+EYG+IDKVL
Sbjct: 181 MEYGLIDKVL 190
>gi|340751561|ref|ZP_08688371.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V I+A+ L+L+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ALLL AGAKG R AL S IMI QP+G
Sbjct: 70 VTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLSAGAKGKRFALEHSRIMIHQPLGGAR 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L ++ A GK+ E+I D R Y S EAVEYG+ID+V
Sbjct: 130 GQATDIEIQAKEILRMKEMLSQILANVSGKSVEEILRDTERDNYMSAQEAVEYGLIDQVF 189
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 120/201 (59%), Gaps = 9/201 (4%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S IMI QP+G +GQATD++I KE+ +++ + L KH G T E+IE D R
Sbjct: 113 ALPNSRIMIHQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTVERIEKDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
+ S +A +YG+ID+V+ ++
Sbjct: 173 FMSAEDARQYGLIDEVVEKQR 193
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 114/186 (61%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V +I+++ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+CVG A A+LL AGAKG R ALPSS IMI QP+G +
Sbjct: 73 VTAGLAIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++A+L +L KH G+ E++E D R + +EA YGI+D+V
Sbjct: 133 GQATDIEIQAKEILRMRAKLNELIVKHTGQPIERVEKDTDRDYFMGAAEAKAYGILDEVQ 192
Query: 275 YTEKSP 280
K P
Sbjct: 193 NPRKIP 198
>gi|156935010|ref|YP_001438926.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
gi|156533264|gb|ABU78090.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M +++P + T+C+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VKA + +L A+H G+ EQIE D R ++ S EAVEYG++D ++
Sbjct: 131 GQATDIEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 190
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 115/184 (62%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GS 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+CVG A AA+LL AGAKG R ALP++ IMI QP+G E
Sbjct: 80 VTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAE 139
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A DVEI +E+ +K L ++ +KH G+ E+IE D R + S EA EYGI+DKV+
Sbjct: 140 GPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
Query: 275 YTEK 278
T +
Sbjct: 200 STRE 203
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V L++A+ L+L+ E+ +K I LYINS G G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG--------GL 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK + T+CVG A A+LL AGAKG R ALP+S IMI QP+G E
Sbjct: 82 VTAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQPLGGAE 141
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A DVEI KE+ +K + ++ +KH G+ E+IE D R + S EA+EYGIIDKV+
Sbjct: 142 GSAKDVEILTKELLRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEYGIIDKVI 201
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED EK +YLYINS G G
Sbjct: 27 DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVYLYINSPG--------GV 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K P+ T+C G A AA+LL GAKG R ALP + IMI QP+G +
Sbjct: 79 VTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIALPHARIMIHQPLGGAQ 138
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++ L ++ H G+ E+I+AD R + S EAV YG++DKV+
Sbjct: 139 GQATDIEIQAKEILRLREVLNQILVDHTGQPVERIKADTDRDFFMSAPEAVAYGLVDKVI 198
>gi|242015536|ref|XP_002428409.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
gi|212513021|gb|EEB15671.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
Length = 252
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ + ++ +++A+ L+LQ E+ +KP+++YINS G G
Sbjct: 57 DIYSRLLKERIICVMGQIHDELSSVVIAQLLFLQSENSKKPVHMYINSPG--------GS 108
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y+ PP+ T CVG A A+LLL AGA G R ALP++ IMI QP G ++
Sbjct: 109 VTAGLGIYDTMQYILPPVATWCVGQACSMASLLLAAGASGMRHALPNARIMIHQPSGGVQ 168
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K ++ LY KH G + E+IE + R K+ +PS+A E+GIIDK+L
Sbjct: 169 GQATDIQIQAEEILKLKKQINHLYVKHTGLSIEKIEQSMERDKFMNPSDAKEFGIIDKIL 228
>gi|304413826|ref|ZP_07395243.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
gi|304283546|gb|EFL91941.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
Length = 261
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ +K I LYINS G G
Sbjct: 68 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPDKDISLYINSPG--------GV 119
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 120 ITAGMSIYDTMQFIKPDVITLCIGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 179
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ +D+EI KE++NVK + L AKH GK E+IE D R + S E+V YG++D+VL
Sbjct: 180 GQVSDIEIHSKEIRNVKNRMNTLMAKHTGKALEEIEKDTERDYFLSAEESVNYGLVDQVL 239
Query: 275 YTEKS 279
T ++
Sbjct: 240 CTRET 244
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 109/177 (61%), Gaps = 10/177 (5%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG S+ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNNKPIYLYINSPG--------GSVTAGM 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QA 217
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI QP+G I+G QA
Sbjct: 79 AIYDTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPHSRIMIHQPLGGIQGRRQA 138
Query: 218 TDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
TD+EI KE+ +K +L ++ A H G+T E+IE D R + S EA+EYG+IDKV+
Sbjct: 139 TDIEIEAKEILRIKNDLNRIMAFHTGQTIEKIEKDTDRDYFMSAQEALEYGLIDKVI 195
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
Length = 193
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL AGAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L AK+ GKT E+I D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLAKNTGKTKEEILRDTERDNYLSSEEAVNYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|402817756|ref|ZP_10867343.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
gi|402504728|gb|EJW15256.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
Length = 192
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 9/195 (4%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ T+ + D+ S L K+RIV++G S+ I+A+ L L ED +K IY+Y
Sbjct: 5 IPYVVEQTSRGERSYDIYSRLLKDRIVFVGSEITDSLANSIVAQLLLLAAEDSDKDIYMY 64
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T F IYD M Y+KP + T+C G A ++LL AGAKG R AL
Sbjct: 65 INSPG--------GSVTAGFGIYDTMQYIKPQVHTICTGLAASYGSILLLAGAKGKRFAL 116
Query: 200 PSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYF 259
P+S IMI QP G +GQA+D+ I+ K + ++ LV+L A H G+ E+IE D+ R +
Sbjct: 117 PNSEIMIHQPHGGAQGQASDIAISAKRILKMRERLVQLMADHTGQPVERIEKDMDRDYFM 176
Query: 260 SPSEAVEYGIIDKVL 274
S EA+EYGIIDK+L
Sbjct: 177 SAEEALEYGIIDKIL 191
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+CVG A A+LL AGAKG R +LPSS IMI QP+G
Sbjct: 73 VTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGAR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ +KA+L +L KH G+T E++E D R + +EA YGIID +
Sbjct: 133 GQATDIEIQAREILRMKAKLNELIVKHTGQTIERVEKDTDRDYFMGAAEAKAYGIIDSI 191
>gi|429089532|ref|ZP_19152264.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
gi|429122487|ref|ZP_19183064.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426322955|emb|CCK13801.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
sakazakii 680]
gi|426509335|emb|CCK17376.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
universalis NCTC 9529]
Length = 189
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 14 DIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M +++P + T+C+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 66 ITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VKA + +L A+H G+ EQIE D R ++ S EAVEYG++D ++
Sbjct: 126 GQATDIEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEAVEYGLVDSIM 185
>gi|410997188|gb|AFV98653.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Sulfuricurvum sp. RIFRC-1]
Length = 198
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V I+A+ L+L+ ED +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDPVASSIVAQMLFLEAEDPQKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++P + T+C+G A A LL +GAKG R ALP + IMI QP+G +
Sbjct: 71 ITSGMAIYDTMNYIRPDVSTICIGQAASMGAFLLSSGAKGKRYALPHARIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +KAEL ++ AK+ G++ +++E D R + S +E VEYGIID+VL
Sbjct: 131 GQATDIEIQAKEILRMKAELNEILAKNCGQSIKKLEKDTDRDNFMSAAEGVEYGIIDEVL 190
Query: 275 YTEKSPE 281
++ E
Sbjct: 191 IQKEKEE 197
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 120/201 (59%), Gaps = 9/201 (4%)
Query: 79 MVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M +PF T + DL S L K+RI+ LG V +I+A+ L+L+ ED +K I
Sbjct: 1 MNVPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+CVG A ALLL AGAKG R
Sbjct: 61 LYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP+S IMI QP+G +GQATD++I KE+ +++ + L KH G T E+IE D R
Sbjct: 113 ALPNSRIMIHQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
+ S +A +YG+ID+V+ ++
Sbjct: 173 FMSAEDARQYGLIDEVVEKQR 193
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1.1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + V +I+A+ L+L+ ED +K I+ YINS G G
Sbjct: 19 DIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPG--------GL 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC+G A AA+LL AG KG R ALP IM+ QP+G +
Sbjct: 71 VTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATDVEI KE+ ++ EL + +H G+ EQI+ D R Y S +A EYG++D +
Sbjct: 131 GQATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQAREYGMVDHIF 190
Query: 275 YTEKS 279
+ S
Sbjct: 191 TSRLS 195
>gi|22124934|ref|NP_668357.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
KIM10+]
gi|45440623|ref|NP_992162.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Microtus str. 91001]
gi|51595309|ref|YP_069500.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108808643|ref|YP_652559.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Antiqua]
gi|108811098|ref|YP_646865.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Nepal516]
gi|145600052|ref|YP_001164128.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Pestoides F]
gi|149364997|ref|ZP_01887032.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|153950622|ref|YP_001402052.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162419837|ref|YP_001607420.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Angola]
gi|165926613|ref|ZP_02222445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935884|ref|ZP_02224454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010967|ref|ZP_02231865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212961|ref|ZP_02238996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398957|ref|ZP_02304481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421692|ref|ZP_02313445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423463|ref|ZP_02315216.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025451|ref|YP_001721956.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis YPIII]
gi|186894326|ref|YP_001871438.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218930187|ref|YP_002348062.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
CO92]
gi|229838761|ref|ZP_04458920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896085|ref|ZP_04511255.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|229899329|ref|ZP_04514472.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229901327|ref|ZP_04516449.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|270489513|ref|ZP_06206587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294504888|ref|YP_003568950.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|384123358|ref|YP_005505978.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|384127209|ref|YP_005509823.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|384138999|ref|YP_005521701.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|384415839|ref|YP_005625201.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420548224|ref|ZP_15046052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|420559163|ref|ZP_15055694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|420564557|ref|ZP_15060528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|420575259|ref|ZP_15070229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|420580575|ref|ZP_15075060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|420585932|ref|ZP_15079913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|420596436|ref|ZP_15089361.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|420602100|ref|ZP_15094400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|420607528|ref|ZP_15099304.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|420612918|ref|ZP_15104142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|420623580|ref|ZP_15113588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|420628671|ref|ZP_15118208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|420639000|ref|ZP_15127489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|420644485|ref|ZP_15132489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|420649756|ref|ZP_15137254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|420660902|ref|ZP_15147254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|420671032|ref|ZP_15156419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|420676406|ref|ZP_15161307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|420682024|ref|ZP_15166384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|420698332|ref|ZP_15180768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|420709536|ref|ZP_15190173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|420714993|ref|ZP_15195025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|420731546|ref|ZP_15209570.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|420736583|ref|ZP_15214121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|420742060|ref|ZP_15219042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|420747778|ref|ZP_15223879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|420753215|ref|ZP_15228731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|420764259|ref|ZP_15238003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|420774473|ref|ZP_15247209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|420780087|ref|ZP_15252150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|420785687|ref|ZP_15257045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|420790833|ref|ZP_15261666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|420796356|ref|ZP_15266631.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|420801410|ref|ZP_15271175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|420817653|ref|ZP_15285832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|420822953|ref|ZP_15290586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|420833741|ref|ZP_15300311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|420849438|ref|ZP_15314483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|420855106|ref|ZP_15319284.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|421764661|ref|ZP_16201449.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
gi|21759072|sp|Q8ZC65.1|CLPP_YERPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389537|sp|Q66DT4.1|CLPP_YERPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122980282|sp|Q1CL65.1|CLPP_YERPN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123072666|sp|Q1C4K8.1|CLPP_YERPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214723|sp|A4TPE3.1|CLPP_YERPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008652|sp|A7FLC4.1|CLPP_YERP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21957773|gb|AAM84608.1|AE013706_3 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Yersinia pestis KIM10+]
gi|45435480|gb|AAS61039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis biovar Microtus str. 91001]
gi|51588591|emb|CAH20199.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Yersinia pseudotuberculosis IP
32953]
gi|108774746|gb|ABG17265.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Nepal516]
gi|108780556|gb|ABG14614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Antiqua]
gi|115348798|emb|CAL21752.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CO92]
gi|145211748|gb|ABP41155.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Pestoides F]
gi|149291410|gb|EDM41484.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|152962117|gb|ABS49578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis IP 31758]
gi|162352652|gb|ABX86600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis Angola]
gi|165916029|gb|EDR34636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921541|gb|EDR38738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989967|gb|EDR42268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205748|gb|EDR50228.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960611|gb|EDR56632.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051461|gb|EDR62869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057633|gb|EDR67379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751985|gb|ACA69503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis YPIII]
gi|186697352|gb|ACC87981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis PB1/+]
gi|229681256|gb|EEO77350.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|229687731|gb|EEO79804.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229695127|gb|EEO85174.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701008|gb|EEO89037.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|262362954|gb|ACY59675.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|262366873|gb|ACY63430.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|270338017|gb|EFA48794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294355347|gb|ADE65688.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|320016343|gb|ADV99914.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342854128|gb|AEL72681.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
A1122]
gi|391423531|gb|EIQ86004.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-01]
gi|391424060|gb|EIQ86482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-03]
gi|391438456|gb|EIQ99199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-04]
gi|391443394|gb|EIR03713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-06]
gi|391455350|gb|EIR14474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-07]
gi|391456213|gb|EIR15260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-08]
gi|391471131|gb|EIR28718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-10]
gi|391472599|gb|EIR30045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-11]
gi|391473491|gb|EIR30865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-12]
gi|391487282|gb|EIR43232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-13]
gi|391488750|gb|EIR44559.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-15]
gi|391503166|gb|EIR57382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-16]
gi|391508660|gb|EIR62377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-25]
gi|391519196|gb|EIR71849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-29]
gi|391521816|gb|EIR74253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-32]
gi|391533877|gb|EIR85118.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-36]
gi|391539165|gb|EIR89908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-45]
gi|391552141|gb|EIS01591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-46]
gi|391552450|gb|EIS01871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-47]
gi|391568177|gb|EIS15938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-53]
gi|391581440|gb|EIS27324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-55]
gi|391583695|gb|EIS29325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-56]
gi|391597147|gb|EIS40996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-60]
gi|391611582|gb|EIS53746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-61]
gi|391612097|gb|EIS54208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-63]
gi|391615076|gb|EIS56883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-64]
gi|391624694|gb|EIS65297.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-65]
gi|391635408|gb|EIS74572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-71]
gi|391647379|gb|EIS85012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-76]
gi|391651070|gb|EIS88293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-88]
gi|391655514|gb|EIS92246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-89]
gi|391660284|gb|EIS96459.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-90]
gi|391667870|gb|EIT03151.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-91]
gi|391678250|gb|EIT12482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-92]
gi|391691373|gb|EIT24309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-95]
gi|391694289|gb|EIT26962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-96]
gi|391708106|gb|EIT39391.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-99]
gi|391724276|gb|EIT53868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-102]
gi|391725026|gb|EIT54533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-103]
gi|411174212|gb|EKS44245.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
INS]
Length = 207
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI KE+ VK+ + +L A H GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S ++VEYG++D V
Sbjct: 181 DTERDRFLSAEQSVEYGLVDSVF 203
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 9/214 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K RI++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M Y+KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQYIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA+G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAEGKRHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
E IE D R + S +AVEYG++D VL K
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDSVLTHHK 207
>gi|295698387|ref|YP_003603042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Riesia pediculicola USDA]
gi|291157158|gb|ADD79603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Riesia pediculicola USDA]
Length = 196
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 8/193 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + + D+ S L K RI++L ++ LI+++ L+L+ E+ K IYLYINS G
Sbjct: 11 TVFGERSYDIYSRLLKERIIFLTGYIEDNMANLIISQLLFLESENQTKEIYLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +IYD + ++ P + T+C+G A A LL +GAKG R LP+S IMI
Sbjct: 69 ------GIITSGISIYDTIQFIMPKVSTICIGQACSMGAFLLASGAKGKRYCLPNSRIMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G GQATD+EI KE+ +K+++ +L AKH GK EQIE D R + S EAV+
Sbjct: 123 HQPMGSFRGQATDIEIHTKEIIKLKSKMNELMAKHTGKQVEQIEKDTERDYFLSSEEAVD 182
Query: 267 YGIIDKVLYTEKS 279
YG++D+V +S
Sbjct: 183 YGLVDRVYLNRRS 195
>gi|301598440|pdb|3HLN|A Chain A, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598441|pdb|3HLN|B Chain B, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598442|pdb|3HLN|C Chain C, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598443|pdb|3HLN|D Chain D, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598444|pdb|3HLN|E Chain E, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598445|pdb|3HLN|F Chain F, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598446|pdb|3HLN|G Chain G, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598447|pdb|3HLN|H Chain H, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598448|pdb|3HLN|I Chain I, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598449|pdb|3HLN|J Chain J, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598450|pdb|3HLN|K Chain K, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598451|pdb|3HLN|L Chain L, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598452|pdb|3HLN|M Chain M, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598453|pdb|3HLN|N Chain N, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598454|pdb|3HLN|O Chain O, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598455|pdb|3HLN|P Chain P, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598456|pdb|3HLN|Q Chain Q, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598457|pdb|3HLN|R Chain R, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598458|pdb|3HLN|S Chain S, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598459|pdb|3HLN|T Chain T, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598460|pdb|3HLN|U Chain U, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598461|pdb|3HLN|V Chain V, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598462|pdb|3HLN|W Chain W, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598463|pdb|3HLN|X Chain X, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598464|pdb|3HLN|Y Chain Y, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598465|pdb|3HLN|Z Chain Z, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598466|pdb|3HLN|1 Chain 1, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598467|pdb|3HLN|2 Chain 2, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 70 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 130 GQATDIEIHCREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 189
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL +GAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L A++ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVRYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 10/182 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G
Sbjct: 18 DIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T+ AIYD M Y+KP + T+CVG A A LL +GAKG R AL +S IMI QP+ G
Sbjct: 70 VTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGG 129
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
++GQATD+ I E+ +K L +L A++ GKT EQI D R Y S EAV YG+ID
Sbjct: 130 LKGQATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVRYGLIDS 189
Query: 273 VL 274
V
Sbjct: 190 VF 191
>gi|358637944|dbj|BAL25241.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. KH32C]
Length = 212
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 113/182 (62%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+V+L LI+A+ L+L+ E+ +K I+ YINS G G
Sbjct: 35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIFFYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M +VKP + TLC+G A + LL AGAKG R LP+S +MI QP+G +
Sbjct: 87 VSAGMAIYDTMQFVKPDVSTLCIGQAASMGSFLLAAGAKGKRFCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ N++A L ++ AKH G+ E+IE D R + S +A+EYGI+DKVL
Sbjct: 147 GQASDIEIHAREILNIRARLNEMLAKHTGQPVERIEKDTDRDNFMSAKDALEYGIVDKVL 206
Query: 275 YT 276
T
Sbjct: 207 TT 208
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+K P+ T+C+G A AA+LL GA G R ALP++ +MI QP+G
Sbjct: 70 ISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMIHQPLGGAH 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++ ++ + KH G+T ++I+AD R Y S +EA+EY IIDKV+
Sbjct: 130 GQATDIEIHAKEILKIREKINDILVKHTGQTRKRIKADTDRDFYMSAAEALEYSIIDKVI 189
>gi|427724371|ref|YP_007071648.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356091|gb|AFY38814.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 200
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG ++ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QA 217
AIYD M ++K + T+CVG A A LL AG KG R ALP + IMI QP+G +G QA
Sbjct: 79 AIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHARIMIHQPLGGTQGRRQA 138
Query: 218 TDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
TD+EI KE+ +K +L +L A H G+T EQIE D R + S EA+EYG+IDKV+
Sbjct: 139 TDIEIEAKEILRIKQQLNELMADHSGQTVEQIEKDTDRDNFMSAQEALEYGLIDKVI 195
>gi|317486004|ref|ZP_07944859.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345887722|ref|ZP_08838886.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
gi|316922777|gb|EFV44008.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|345041509|gb|EGW45656.1| ATP-dependent Clp protease proteolytic subunit [Bilophila sp.
4_1_30]
Length = 207
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 9/205 (4%)
Query: 76 VITMVIPFTSGTAWE-QPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
++ M +P T+ + D+ S L K+RIV LG +V LI A+ L+L+ +D EK
Sbjct: 4 ILDMTVPIVVETSGRTERAYDIFSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEK 63
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M Y+ PPI T+C+G A A LL AG KG
Sbjct: 64 EIYLYINSPG--------GSVTAGMAIYDTMNYITPPIATVCMGRAASMGAFLLSAGQKG 115
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP+S +MI QP+G +GQATD++I +E+ ++ L L AKH G+ E+I D
Sbjct: 116 MRYALPNSQVMIHQPLGGFQGQATDIDIHAREILRMRETLNGLLAKHTGQPIEKIAQDTE 175
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKS 279
R + + A YG++DKVL + +
Sbjct: 176 RDNFMTAEMAQAYGLVDKVLASRRD 200
>gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226706450|sp|B8DNL4.1|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 201
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V LI A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ P+ TLC+G A ALLL AGA G R ALP+S IMI QP G
Sbjct: 70 VTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPGMRHALPNSRIMIHQPSGGFH 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ +KA L ++ A+H G+ E++ D R + P+EA EYGIID +L
Sbjct: 130 GQASDIDIHAREVLRMKANLNEIMARHTGQPVERVADDTERDYFMGPAEAKEYGIIDSIL 189
Query: 275 YTEK 278
+ +
Sbjct: 190 TSRR 193
>gi|383754373|ref|YP_005433276.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366425|dbj|BAL83253.1| putative ATP-dependent Clp protease proteolytic subunit
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 203
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG SV +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGQIDDSVANVVVAQMLFLESEDPDKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNARVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I +E++ ++ + ++ GKT E+I D R + + +EA YGI+D+V+
Sbjct: 131 GQSTDIQIQAREIQRIRETINDIFVSSTGKTAEEINNDTERDNFMTAAEAKAYGIVDEVI 190
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MV+ TS + D+ S L K RI++L ++ LI+A+ L+L+ ED EK
Sbjct: 3 LIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP++ +MI QP+G GQATD++I +E+ +K L + A+H G++ +++ AD R
Sbjct: 112 RFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQSFDKVAADTER 171
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S EA EYG+IDKVL
Sbjct: 172 DNFMSAEEAKEYGLIDKVL 190
>gi|110816466|sp|Q2NV79.2|CLPP_SODGM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++ + LI+A+ ++L+ E+ EK IYLYINS G G
Sbjct: 19 DIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VKA + +L AKH G+ E IE D R ++ S EAV+YG++D VL
Sbjct: 131 GQATDIEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSAPEAVDYGLVDSVL 190
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED E+ IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++KP + T+CVG A A LL AG KG R +LP+S IMI QP+G +
Sbjct: 69 VYDGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L A H G+ E+I D R + SPSEAVEYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYIKKTLNDALAAHTGQPIERITEDTERDFFMSPSEAVEYGLIDQVI 188
>gi|37527729|ref|NP_931074.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|60389709|sp|Q7N0L3.1|CLPP_PHOLL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|36787165|emb|CAE16241.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 (Endopeptidase Clp)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 207
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K +P + +V T + D+ S L K RI++L + L+ A+ L+L+
Sbjct: 6 KRDQYAPHMALVPMVVEQTTRGERSYDIYSRLLKERIIFLTGQVEDHMANLVAAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK+ + +L AKH G+ E+
Sbjct: 118 TAGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKSRMNELMAKHTGRPIEE 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
I D R ++ S EAVEYG++DK+
Sbjct: 178 IAKDTERDRFLSADEAVEYGLVDKIF 203
>gi|224125178|ref|XP_002319519.1| predicted protein [Populus trichocarpa]
gi|118486796|gb|ABK95233.1| unknown [Populus trichocarpa]
gi|222857895|gb|EEE95442.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM V +VTEL++AE +YLQ+ D + PIY+YINSTGTT+ GE +G ETE FAIY
Sbjct: 139 RIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETEGFAIY 198
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QATDV 220
D M +K I T+ VG A G+A LLL AG KG+R +P + MI+QP G A+DV
Sbjct: 199 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQPRVPSSGLMPASDV 258
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
I KE + L +L AKH G + E + ++RP Y A E+G+IDK+L+
Sbjct: 259 LIRAKEAVINRDVLTELLAKHTGNSVETVANVMKRPFYMDSRRAKEFGVIDKILW 313
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 110/187 (58%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V I A+ L+L+ E+ EK IY+YINS G G
Sbjct: 20 DIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINSPG--------GA 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ P+ TLC+G A AA+LL AG KG R LP S IMI QP+G +
Sbjct: 72 VTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQPMGGFQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I KE+ ++ EL + A H G+T E++E D R + S EA YG+ID+VL
Sbjct: 132 GQATDIAIQAKEIIRLRGELNGILANHTGQTLEKVEQDTERDYFMSGEEACAYGLIDQVL 191
Query: 275 YTEKSPE 281
+ K E
Sbjct: 192 ASRKELE 198
>gi|290474663|ref|YP_003467543.1| clpA-clpP ATP-dependent serine protease proteolytic subunit
[Xenorhabdus bovienii SS-2004]
gi|289173976|emb|CBJ80763.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus bovienii SS-2004]
Length = 207
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 9/211 (4%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K +P +++V TA + D+ S L K+RI++L + LI+A+ L+L+
Sbjct: 6 KQDKYAPNMSLVPMVVEQTARGERAFDIYSRLLKDRIIFLTGPVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDINLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L AKH GK E+
Sbjct: 118 TAGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKARMNELMAKHTGKPLEK 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
I D R ++ S +E+VEYG++D + +T+++
Sbjct: 178 IVEDTERDRFLSAAESVEYGLVDSI-FTQRN 207
>gi|410087016|ref|ZP_11283721.1| ATP-dependent Clp protease proteolytic subunit [Morganella morganii
SC01]
gi|455740393|ref|YP_007506659.1| ATP-dependent Clp protease proteolytic subunit [Morganella morganii
subsp. morganii KT]
gi|409766245|gb|EKN50339.1| ATP-dependent Clp protease proteolytic subunit [Morganella morganii
SC01]
gi|455421956|gb|AGG32286.1| ATP-dependent Clp protease proteolytic subunit [Morganella morganii
subsp. morganii KT]
Length = 206
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 63 NPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILA 122
N D+F P ++ MVI TS + D+ S L K+RI++L + LI+A
Sbjct: 6 NQDTFA---PNMALVPMVIEQTS---RGERSYDIYSRLLKDRIIFLTGQVEDHMANLIVA 59
Query: 123 EFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWG 182
+ L+L+ E+ EK I LYINS G G T +IYD M ++KP + T+CVG A
Sbjct: 60 QLLFLEAENPEKDISLYINSPG--------GVITAGMSIYDTMQFIKPQVSTICVGQACS 111
Query: 183 EAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHF 242
+ LL AGA G R LP+S +MI QP+G +GQATD+EI +E+ VKA + L A H
Sbjct: 112 MGSFLLAAGAPGKRYCLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKARMNDLLAHHT 171
Query: 243 GKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
GK+ E+I+ D R ++ S EA EYG++D + YT +
Sbjct: 172 GKSVEEIQRDTERDRFLSAKEAQEYGLVDHI-YTHR 206
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L K+ A+ G++ E+IE D R + S EA EYG+ID V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNKILAERTGQSIEKIEKDTDRDNFLSADEAKEYGLIDHVM 190
Query: 275 YTE 277
E
Sbjct: 191 EPE 193
>gi|342731984|ref|YP_004770823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455401|ref|YP_005667995.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417962125|ref|ZP_12604399.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|417963799|ref|ZP_12605667.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|417967677|ref|ZP_12608746.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|418016623|ref|ZP_12656188.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372234|ref|ZP_12964326.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329439|dbj|BAK56081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506958|gb|EGX29252.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|346983743|dbj|BAK79419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380331068|gb|EIA22177.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-2]
gi|380331769|gb|EIA22747.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-3]
gi|380340900|gb|EIA29436.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-co]
gi|380341903|gb|EIA30348.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLVVAQLLFLESEDTDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI QP+G
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + +K +L K+ +++ GK+ QIE D+ R + S EA EYG+ID V+
Sbjct: 131 GQATDIDIHARRILRMKNDLNKILSENTGKSLSQIELDVERDHFLSSYEAKEYGLIDNVI 190
Query: 275 YTEK 278
+K
Sbjct: 191 SKKK 194
>gi|269138347|ref|YP_003295047.1| protease subunit of ATP-dependent Clp protease [Edwardsiella tarda
EIB202]
gi|387867066|ref|YP_005698535.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
FL6-60]
gi|267984007|gb|ACY83836.1| protease subunit of ATP-dependent Clp protease [Edwardsiella tarda
EIB202]
gi|304558379|gb|ADM41043.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
FL6-60]
Length = 189
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK I+LYINS G G
Sbjct: 14 DIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A + LL AGA+G R LP+S +MI QP+G +
Sbjct: 66 ITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVMIHQPLGGFQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++KA + L AKH G+ E IE D R ++ S +AVEYG++D VL
Sbjct: 126 GQATDIEIHAKEILSIKARMNTLMAKHSGQPIEVIERDTERDRFMSAQDAVEYGLVDAVL 185
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+ M++P T + D+ S L K+RI++LG + L++A+ L+L+ ED +K
Sbjct: 1 MKMLVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I LYINS G G T IYD M Y+K P+ T+CVG A AA+LL AGAKG
Sbjct: 61 INLYINSPG--------GSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP+S +M+ QP+G ++GQATD+EI KE+K ++ L ++ A H + E++ D R
Sbjct: 113 RIALPNSRVMLHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDR 172
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S EA+ YGI+DKV+
Sbjct: 173 DFFMSAEEALAYGIVDKVI 191
>gi|294635324|ref|ZP_06713821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
gi|291091300|gb|EFE23861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
Length = 194
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A + LL AGA+G R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++KA + L AKH G+ E IE D R ++ S EAV+YG++D VL
Sbjct: 131 GQATDIEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSAQEAVDYGLVDAVL 190
>gi|386822500|ref|ZP_10109707.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
gi|386380574|gb|EIJ21304.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
PRI-2C]
Length = 193
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 19 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPG--------GA 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M ++ + TLC+G A + LL AG G+RAALP++++ + QP+G +
Sbjct: 71 ITSGFAIYDTMRFINAQVHTLCMGTARSMGSFLLMAGEPGHRAALPNASLHVHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +++LYA+H G + E++E + R ++ + EAVE+G++D+VL
Sbjct: 131 GQASDIFIHAEEMRRTKQRVIRLYAEHCGHSDEEVEQALDRDRFMTADEAVEWGLVDRVL 190
>gi|238754235|ref|ZP_04615592.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
gi|238707482|gb|EEP99842.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
Length = 194
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK+ + +L AKH GK E+IE D R ++ S E+V+YG++D +
Sbjct: 131 GQATDIEIHAREILKVKSRMNELMAKHTGKPLEEIERDTERDRFLSAEESVKYGLVDDIF 190
>gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 195
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPLGGMH 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L ++ A++ G+ E+I+AD R + +A YGIID+VL
Sbjct: 131 GQATDIKIHAERILKLRDKLDRILAENTGQPIEKIKADTERDFFMDAEDAKAYGIIDEVL 190
Query: 275 YTEK 278
K
Sbjct: 191 IRNK 194
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 115/199 (57%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL GAKG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGK 111
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP + +MI QP+G GQATD++I +E+ +K L + A+H G+ E++ AD R
Sbjct: 112 RFALPHARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRRMAEHSGQPFEKVAADTER 171
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S EA EYG+IDKVL
Sbjct: 172 DNFMSAFEAAEYGLIDKVL 190
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 112/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V LI+A+FL+L+ ED +K I+ YINS G G
Sbjct: 23 DIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDPDKDIHFYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AI+D M Y++P + T+CVG A A LL AGAKG R ALP+S IMI QPIG +
Sbjct: 75 ISAGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGTQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + N+K L ++ A+ G+ E IE D+ R + + EA YGIID +
Sbjct: 135 GQATDIEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMTAEEAKAYGIIDDIF 194
Query: 275 YTEK 278
Y K
Sbjct: 195 YESK 198
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R +++G V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R +LP + IMI QP+G ++
Sbjct: 72 ITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ ++ L +L KH G+ E+IE D R + S +EA EYGIID+V+
Sbjct: 132 GQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
Query: 275 YTEK 278
K
Sbjct: 192 TVRK 195
>gi|307177704|gb|EFN66732.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Camponotus floridanus]
Length = 234
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L V+ ++A+ L+LQ E + PI+LYINS G G
Sbjct: 41 DIYSRLLKERIICLMGPITDDVSSAVVAQLLFLQSESSKNPIHLYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AG KG R +LP++ IM QP G ++
Sbjct: 93 VTAGLGIYDTMQYVLPPVSTWCVGQACSMASLLLAAGTKGMRHSLPNARIMTHQPSGGVQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ +LY KH G+ E+IE + R + SP+EA E+GIIDKVL
Sbjct: 153 GQATDIQIQALEIIKLKKQINELYVKHTGQDLEKIEKGMERDNFMSPTEAKEFGIIDKVL 212
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
R+ ++ MVI TSG + D+ S L + RI++LG V L++A+ ++L+ ED
Sbjct: 25 RNTLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ I++YINS G G + IYD M Y++P I T+CVG A A LL +G
Sbjct: 82 ERDIFIYINSPG--------GSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGT 133
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP S IMI QP G +GQ TD+ I +E++ ++ L +L AKH G+ +QI D
Sbjct: 134 KGKRASLPHSRIMIHQPSGGAQGQETDIIIQAREIEKIRKLLEELLAKHTGRDVQQIRED 193
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ + +EA+EYGIID+V +PE
Sbjct: 194 SERDRWMNAAEALEYGIIDQVFEKRPAPE 222
>gi|389806651|ref|ZP_10203698.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445303|gb|EIM01383.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
thiooxydans LCS2]
Length = 209
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+V+L V LI+A+ L+L+ E+ +K I YINS G
Sbjct: 19 TARGERSYDIYSRLLKERVVFLVGEVNDQVANLIVAQMLFLESENPDKDINFYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + T+C+G A + LL AGAKG R ALP+S +MI
Sbjct: 77 ------GAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRVMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G +GQATD+EI +E+ ++ L KLY +H G+T E+IEAD+ R ++ S ++A
Sbjct: 131 HQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIEADMERDRFMSAADAKA 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDEVL 198
>gi|255070315|ref|XP_002507239.1| predicted protein [Micromonas sp. RCC299]
gi|226522514|gb|ACO68497.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 203
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 116/176 (65%), Gaps = 7/176 (3%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RI+Y+GM VP+VTELI++E LY+QY D +P Y+YINSTG + GE +G+ETEA +IY
Sbjct: 30 RIIYIGMPLVPAVTELIVSELLYMQYTDPARPCYIYINSTGCQRADGEVVGFETEATSIY 89
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI----EGQAT 218
D M Y+ IFT+ G A G+A +LL AG KG R ++T M+ QP R+ + QA
Sbjct: 90 DTMKYIGNEIFTVGTGVAIGQACMLLSAGDKGKRFMTKNATAMLHQP--RVPSTGQRQAI 147
Query: 219 DVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
++ I KE+ K +V + ++ G + EQI+ DI+RP Y + +A+ YGIIDK++
Sbjct: 148 ELHIKWKEVLEQKKTMVDILSQTTGHSKEQIDKDIQRPMYMTAEDAIAYGIIDKIV 203
>gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 203
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ +KPIYLYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ K + +LYA+H G++ E E + R ++ + EA+E+G+IDK++
Sbjct: 135 GQATDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTSQEALEWGLIDKIM 194
Query: 275 YTEKSPEDH 283
+ P D
Sbjct: 195 QLREVPADQ 203
>gi|420553562|ref|ZP_15050818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|420569607|ref|ZP_15065113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|420591043|ref|ZP_15084509.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|420618297|ref|ZP_15108830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|420633805|ref|ZP_15122806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|420655369|ref|ZP_15142296.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|420666185|ref|ZP_15152006.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|420687358|ref|ZP_15171122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|420692566|ref|ZP_15175697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|420704163|ref|ZP_15185410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|420720505|ref|ZP_15199753.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|420725980|ref|ZP_15204569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|420758993|ref|ZP_15233387.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|420769492|ref|ZP_15242698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|420806767|ref|ZP_15276025.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|420812123|ref|ZP_15280835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|420828034|ref|ZP_15295153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|420838590|ref|ZP_15304689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|420843781|ref|ZP_15309401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|420860298|ref|ZP_15323854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
gi|391423950|gb|EIQ86385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-02]
gi|391439562|gb|EIR00202.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-05]
gi|391458196|gb|EIR17077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-09]
gi|391489124|gb|EIR44903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-14]
gi|391503385|gb|EIR57585.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-19]
gi|391520901|gb|EIR73417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-34]
gi|391536802|gb|EIR87752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-42]
gi|391552917|gb|EIS02301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-48]
gi|391567019|gb|EIS14934.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-52]
gi|391572900|gb|EIS20068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-54]
gi|391594117|gb|EIS38316.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-58]
gi|391598290|gb|EIS42027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-59]
gi|391629474|gb|EIS69405.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-66]
gi|391637429|gb|EIS76349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-72]
gi|391677428|gb|EIT11736.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-93]
gi|391678723|gb|EIT12911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-94]
gi|391696021|gb|EIT28549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-98]
gi|391711593|gb|EIT42546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-100]
gi|391712447|gb|EIT43325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-101]
gi|391727619|gb|EIT56810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis PY-113]
Length = 194
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ VK+ + +L A H GK+ E+IE D R ++ S ++VEYG++D V
Sbjct: 131 GQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEIERDTERDRFLSAEQSVEYGLVDSVF 190
>gi|228470612|ref|ZP_04055469.1| Clp protease [Porphyromonas uenonis 60-3]
gi|228307739|gb|EEK16715.1| Clp protease [Porphyromonas uenonis 60-3]
Length = 221
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI++LG +I A+ LYL D K I +YINS G G
Sbjct: 33 DVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPG--------GS 84
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
F IYD M YV + T+C G A AA+LL AGA+G R ALP S +MI QP+G ++
Sbjct: 85 VYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQ 144
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA KE+ VKAEL K+ A H G++ E+IE D R K+ + SEA+EYG+IDKVL
Sbjct: 145 GQASDIEIAAKEILKVKAELYKIIADHSGRSVEEIERDSDRDKWMTASEALEYGMIDKVL 204
Query: 275 YTEK 278
+ K
Sbjct: 205 TSTK 208
>gi|284006421|emb|CBA71657.1| ATP-dependent Clp protease proteolytic subunit [Arsenophonus
nasoniae]
Length = 209
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 125/208 (60%), Gaps = 12/208 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MVI TS + D+ S L K RI++L + L++A+ L+L+ E+
Sbjct: 14 PHMALVPMVIEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQMLFLEAEN 70
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 71 PDKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 122
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D+EI KE+ +K+ + +L AKH GK +++E
Sbjct: 123 AKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILKIKSRMNELMAKHTGKKIKEVEN 182
Query: 252 DIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
D R ++ + EAV YG++DK+ YT ++
Sbjct: 183 DTERDRFLTAEEAVSYGLVDKI-YTNRN 209
>gi|357633385|ref|ZP_09131263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
gi|357581939|gb|EHJ47272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
Length = 204
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 16/213 (7%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P I +VI T + D+ S L ++RI+ LG + V LI A+ L+L+ ED EK
Sbjct: 2 PTIPIVI---ETTGRSERAYDIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I++YINS G G T AIYD M YV P + TLC+G A ALLL AGA G
Sbjct: 59 EIFMYINSPG--------GSVTAGLAIYDTMQYVLPKVSTLCMGQAASMGALLLCAGATG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP+G +GQATD++I +E+ ++ L ++ A+H G+ E++ D
Sbjct: 111 MRYALPHSRIMIHQPMGGFQGQATDIDIHAREILRIRESLNEIMARHTGQDIEKVRVDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYT-----EKSPED 282
R + + EAV YG+IDKVL + +K PE+
Sbjct: 171 RDYFMNADEAVTYGLIDKVLTSREPVAKKEPEE 203
>gi|91083021|ref|XP_974664.1| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli) [Tribolium
castaneum]
gi|270007650|gb|EFA04098.1| hypothetical protein TcasGA2_TC014333 [Tribolium castaneum]
Length = 258
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI+ L + +I+A+ L+LQ E KPI++YINS G G
Sbjct: 54 DIYSRLLRERIICLMGPITDYTSSVIIAQLLFLQAESASKPIHMYINSPG--------GV 105
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y+ PP+ T CVG A A+L+L AGAKG R +LP+S IMI QP G
Sbjct: 106 ITSGLGIYDTMQYILPPVATWCVGQACSMASLILAAGAKGMRHSLPNSRIMIHQPSGGAS 165
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K ++ LY KH E++E + R + SPSEA+E+GIIDKVL
Sbjct: 166 GQATDIKIQAEEILKMKKQINCLYVKHTETALERVEQSVERDNFMSPSEALEFGIIDKVL 225
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 119/187 (63%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++ ++ +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+KP + T+C+G A A++LL AGA G R ALP S +MI QP+G +
Sbjct: 71 VSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EI +E+ ++ E+ ++ AKH G+T E+I AD R Y + EA EYG+ID+V+
Sbjct: 131 GQATEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEAKEYGLIDEVV 190
Query: 275 YTEKSPE 281
KS E
Sbjct: 191 SRSKSAE 197
>gi|347753754|ref|YP_004861318.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
gi|347586272|gb|AEP10802.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum B]
Length = 199
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 11/204 (5%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
P + ++ MVI TS + D+ S L K+ I+++G +V L++A+ L+L+ E
Sbjct: 3 HPTAALVPMVIEQTS---RGERAYDIYSRLLKDNIIFIGTPIDDTVASLVVAQLLFLESE 59
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D E+ I +YINS G G T AIYD M +VKP I T C+G ALLL A
Sbjct: 60 DPERDISIYINSPG--------GSVTAGMAIYDTMQFVKPDIVTFCIGQCASMGALLLAA 111
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
G KG R ALP S I+I QP G +GQATD+ I +E+K ++ + AKH GK E IE
Sbjct: 112 GTKGKRYALPHSRILIHQPSGGAQGQATDILIQAEEIKRIRELTSNILAKHTGKPFEVIE 171
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVL 274
AD+ R + S ++A+EYGI+D+VL
Sbjct: 172 ADVERDRIMSATQAMEYGIVDQVL 195
>gi|418324661|ref|ZP_12935892.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
gi|365225160|gb|EHM66411.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pettenkoferi VCU012]
Length = 194
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDADKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ FAIYD + ++KP + T+CVG A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VSAGFAIYDTIQHIKPDVQTICVGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L K+ A+ G++ +QIE D R + S EA +YG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNKILAERTGQSIDQIEKDTDRDNFLSADEAKDYGLIDEVM 190
Query: 275 YTEK 278
E+
Sbjct: 191 QPEE 194
>gi|372488837|ref|YP_005028402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dechlorosoma
suillum PS]
gi|359355390|gb|AEV26561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dechlorosoma
suillum PS]
Length = 213
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+L + L++A+ L+L+ ++ +K I+ YINS G G
Sbjct: 32 DIYSRLLKERIVFLVGPVNDASANLVVAQLLFLEADNPDKDIFFYINSPG--------GS 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 84 VTAGLSIYDTMQFIKPDVSTLCMGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPMGGFQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ +++A+L ++ AKH G+ ++IE D R + S +EA+EYG+IDKVL
Sbjct: 144 GQASDIEIHAKEILSLRAKLNEIMAKHSGQPVDRIEKDTDRDNFLSAAEAMEYGLIDKVL 203
Query: 275 YTEKSPED 282
+ ++
Sbjct: 204 SSRADAQE 211
>gi|238783609|ref|ZP_04627630.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
gi|238715487|gb|EEQ07478.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
Length = 207
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI A+ L+L+ E+
Sbjct: 12 PNMALVPMVVEQTS---RGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAEN 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQATD+EI +E+ VK+ + +L A H GK+ E+IE
Sbjct: 121 AKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEIER 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ S EAV YG++D V
Sbjct: 181 DTERDRFLSAEEAVGYGLVDSVF 203
>gi|307204646|gb|EFN83268.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Harpegnathos saltator]
Length = 237
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +V+ +++A+ L+LQ E + PI++YINS G G
Sbjct: 43 DIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSESSKNPIHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AGAKG R +LP++ IM QP G ++
Sbjct: 95 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAKGMRHSLPNARIMTHQPSGGVQ 154
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ +LY KH G+ E+IE+ + R + SP +A E+G+IDKVL
Sbjct: 155 GQATDIQIQALEILKLKKQINELYVKHTGQELEKIESSMERDNFMSPIQAKEFGLIDKVL 214
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 115/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L ++ A+ G++ E+IE D R + S EA EYG++D+V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVDQVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 115/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L ++ A+ G++ E+IE D R + S EA EYG++D+V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAKEYGLVDQVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|56478265|ref|YP_159854.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
gi|67460188|sp|Q5P161.1|CLPP_AZOSE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56314308|emb|CAI08953.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
Length = 212
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L LI+A+ L+L+ E+ +K +Y YINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDVYFYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M ++KP + TLC+G A + LL AG KG R LP+S +MI QP+G +
Sbjct: 87 VSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ ++A+L ++ AKH G+ EQIE D R ++ S ++AVEYGI+DKVL
Sbjct: 147 GQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADAVEYGIVDKVL 206
>gi|400406574|ref|YP_006589322.1| ATP-dependent Clp protease, proteolytic subunit ClpP [secondary
endosymbiont of Heteropsylla cubana]
gi|400364827|gb|AFP85894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [secondary
endosymbiont of Heteropsylla cubana]
Length = 207
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRS-PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ K+K P +T+V T + D+ S L K RI+++ + LI+A+
Sbjct: 2 SYSKTKHHFIPHMTLVPMVVEKTTHGERSFDIFSRLLKERIIFINGHIEDHMASLIVAQM 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
++L+ E+ EK I LYINS G G T IYD M ++KP I T C+G A
Sbjct: 62 MFLEAENPEKNISLYINSPG--------GVITAGMCIYDTMQFIKPDISTFCMGQAASMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL +G KG R +LP++ IMI QP+G +GQATD+EI +E+ +K + KL AKH GK
Sbjct: 114 AFLLSSGTKGKRFSLPNTRIMIHQPLGGFQGQATDIEIHTREILYIKDRMNKLMAKHTGK 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ IE D R ++ S EAVEYG+ID VL
Sbjct: 174 PLKMIEQDTERDRFLSADEAVEYGLIDSVL 203
>gi|421783030|ref|ZP_16219482.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
gi|407754736|gb|EKF64867.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
plymuthica A30]
Length = 193
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 19 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPG--------GA 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M ++ + TLC+G A + LL AG G+RAALP++++ + QP+G +
Sbjct: 71 ITSGFAIYDTMRFINAQVHTLCMGTARSMGSFLLMAGEPGHRAALPNASLHVHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +++LYA+H G + E++E + R ++ + EAVE+G++D+VL
Sbjct: 131 GQASDIFIHAEEMRRTKKRVIRLYAEHCGHSEEEVEQVLDRDRFMTADEAVEWGLVDRVL 190
>gi|354559730|ref|ZP_08978975.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
gi|353540550|gb|EHC10024.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
metallireducens DSM 15288]
Length = 204
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 117/189 (61%), Gaps = 11/189 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPIDDDVANLIVAQLLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI---G 211
+ AIYD M Y++P + T+CVG A A LL +GAKG R ALP++ I+I QP+ G
Sbjct: 72 ISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTSGAKGKRTALPNAEILIHQPLIGGG 131
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
I GQAT+VEI K + V+A + ++ A+ G+T E+IEAD R Y + EA EYG++D
Sbjct: 132 GISGQATEVEIHAKHLLQVRARMNRILAERTGQTVEKIEADTERDHYMTADEAKEYGLVD 191
Query: 272 KVLYTEKSP 280
+VL +P
Sbjct: 192 EVLEKIATP 200
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 6 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 63 ENPEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
GAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ + +
Sbjct: 115 GGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVV 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
D R + S S+AV+YGI+D V S
Sbjct: 175 SRDTDRDNFMSASQAVDYGIVDSVFTNRGS 204
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI QP+G
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGAR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K L + A+H G+ E++ AD R + S EA+EYG+IDKVL
Sbjct: 131 GQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
>gi|242279532|ref|YP_002991661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
gi|242122426|gb|ACS80122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
Length = 202
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V +I A+ L+L+ ED EK IY+YINS G G
Sbjct: 20 DIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKEIYMYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ P+ TLC+G A A LL AG KG R +LP S I+I QP+G +
Sbjct: 72 VTAGMAIYDTMQYISAPVATLCMGQAASMGAFLLSAGEKGQRYSLPHSRILIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ ++ L + A++ G+T E+IE D R + S EAVEYG+IDKVL
Sbjct: 132 GQATDIDIQAREILRLRKSLNSIMAENTGRTVEEIEKDTDRDNFMSAQEAVEYGLIDKVL 191
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG V L++A+ L+L+ ED +K
Sbjct: 6 IIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDK 65
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
+YLYINS G G T AIYD M Y+K + T+CVG A AA+LL AG KG
Sbjct: 66 DVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKG 117
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP++ IMI QP+G EG A DVEI +E+ +K L ++ +KH G+ E+IE D
Sbjct: 118 KRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTD 177
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA EYGI+DKV+
Sbjct: 178 RDFFMSAEEAKEYGIVDKVV 197
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 13 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 64
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI QP+G
Sbjct: 65 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGAR 124
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K L + A+H G+ E++ AD R + S EA+EYG+IDKVL
Sbjct: 125 GQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 184
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC G A A LL GAKG R ALP++ +MI QP+G
Sbjct: 71 VTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGAR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K L + A+H G+ E++ AD R + S EA+EYG+IDKVL
Sbjct: 131 GQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
>gi|350552166|ref|ZP_08921372.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
gi|349795031|gb|EGZ48837.1| ATP-dependent Clp protease proteolytic subunit [Thiorhodospira
sibirica ATCC 700588]
Length = 214
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+V+ + LI+A+ L+L+ E+ +K I LYINS G
Sbjct: 24 TARGERAYDIYSRLLKERVVFAVGPVEDHMANLIVAQLLFLESENPDKDISLYINSPG-- 81
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + TLC+G A A+LL GAKG R L S +MI
Sbjct: 82 ------GAVTAGLAIYDTMQFIKPDVSTLCIGQAASMGAVLLSGGAKGKRYCLAHSRVMI 135
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQA+D++I +E+ ++A+L ++ AKH G++ E+IE D R ++ SP +A++
Sbjct: 136 HQPLGGFQGQASDIDIHAREILKIRAQLNEILAKHSGQSIERIENDTDRDRFMSPQDALD 195
Query: 267 YGIIDKVLYTEKSPE 281
YG+ID++L + PE
Sbjct: 196 YGLIDQILTSRAEPE 210
>gi|333916237|ref|YP_004489969.1| ATP-dependent Clp protease proteolytic subunit [Delftia sp. Cs1-4]
gi|333746437|gb|AEF91614.1| ATP-dependent Clp protease proteolytic subunit [Delftia sp. Cs1-4]
Length = 201
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 124/197 (62%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P +A + D+ S L ++R+++L +V+ L+ A+ L+L+ E+ +KPI+
Sbjct: 6 MLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A+YD M ++K P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G ++GQA+D+ I +EM K + +LYA+H G++ E++E D+ R +
Sbjct: 118 ALPNASLHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA E+G+IDKVL
Sbjct: 178 FMTAEEAREWGLIDKVL 194
>gi|333926787|ref|YP_004500366.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333931741|ref|YP_004505319.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|386328610|ref|YP_006024780.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
gi|333473348|gb|AEF45058.1| ATP-dependent Clp protease proteolytic subunit [Serratia plymuthica
AS9]
gi|333490847|gb|AEF50009.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS12]
gi|333960943|gb|AEG27716.1| ATP-dependent Clp protease proteolytic subunit [Serratia sp. AS13]
Length = 197
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKP++LYINS G G
Sbjct: 23 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPMHLYINSPG--------GA 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M ++ + TLC+G A + LL AG G+RAALP++++ + QP+G +
Sbjct: 75 ITSGFAIYDTMRFINAQVHTLCMGTARSMGSFLLMAGEPGHRAALPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +V+LYA+H G + E++E + R ++ + EAVE+G++D+VL
Sbjct: 135 GQASDIFIHAEEMRRTKERVVRLYAEHCGHSAEEVEHVLDRDRFMTADEAVEWGLVDRVL 194
>gi|160897495|ref|YP_001563077.1| ATP-dependent Clp protease proteolytic subunit [Delftia acidovorans
SPH-1]
gi|160363079|gb|ABX34692.1| Endopeptidase Clp [Delftia acidovorans SPH-1]
Length = 201
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 124/197 (62%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P +A + D+ S L ++R+++L +V+ L+ A+ L+L+ E+ +KPI+
Sbjct: 6 MLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A+YD M ++K P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G ++GQA+D+ I +EM K + +LYA+H G++ E++E D+ R +
Sbjct: 118 ALPNASLHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA E+G+IDKVL
Sbjct: 178 FMTAEEAREWGLIDKVL 194
>gi|325107893|ref|YP_004268961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968161|gb|ADY58939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 202
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+T ++P+ E+ D+ S L K+RI++LG +++ I+A+ LYLQ++D +
Sbjct: 1 MTTLVPYVVEKNGREERAMDIYSRLLKDRIIFLGTQVNDTISNSIVAQLLYLQFDDPKSD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I++YINS G G T AIYD M ++ + T C+G A A+LL AGA+G
Sbjct: 61 IHMYINSPG--------GSITAGMAIYDTMQFISCDVATYCLGQAASMGAVLLAAGAEGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
RAALP+S IMI QP+ +EG ATD+EI +E+ VK + ++ KH G++ E++E D R
Sbjct: 113 RAALPNSRIMIHQPLAGMEGTATDLEIHAREVLKVKKRMNEILQKHTGRSLEELERDTDR 172
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSPED 282
+ + EA +YG++DKVL E P D
Sbjct: 173 DNFMTAEEARDYGLVDKVL--EHLPTD 197
>gi|293392545|ref|ZP_06636865.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
gi|291424947|gb|EFE98156.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
Length = 207
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+ E
Sbjct: 12 PHMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAES 68
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL AG
Sbjct: 69 PEKDIFLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLTAG 120
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G++ EQI+
Sbjct: 121 TKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLEQIDR 180
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R ++ + E+VEYG++D +L
Sbjct: 181 DTERDRFMTAEESVEYGLVDGIL 203
>gi|218961379|ref|YP_001741154.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
gi|167730036|emb|CAO80948.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 194
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G ++ ++A+ L+L+ ED E+ IY+YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGGVIEDNLANTVVAQLLHLEGEDPERDIYMYINSPG--------GI 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+KP + T+C+G A AA+LL AGA G R+ALP+S IMI QP+G +
Sbjct: 71 ISAGLAIYDTMQYIKPRVSTICIGQAASMAAVLLAAGAPGKRSALPNSRIMIHQPMGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++ + ++ KH G++ E+I D R + S EA+EYGIID+V+
Sbjct: 131 GQATDIEIQAKEILYLRGRMNEILHKHSGQSIEKIMEDTERNYFMSAEEAMEYGIIDEVI 190
Query: 275 YTEK 278
K
Sbjct: 191 SVRK 194
>gi|406967034|gb|EKD92235.1| hypothetical protein ACD_29C00105G0002 [uncultured bacterium]
Length = 207
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
SF + + R+ ++ MV+ SG + D+ S L K+R+V+L + L++A+ L
Sbjct: 2 SFEQMEFRNNLVPMVVE-QSGRG--ERAYDIYSRLLKDRVVFLIGQVEEHMANLVIAQLL 58
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK I LYINS G G T AIYD M ++KP + TLC+G A AA
Sbjct: 59 FLESENPEKDISLYINSPG--------GVVTAGMAIYDTMQFIKPDVRTLCIGQAASIAA 110
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LLL AG KG R ALP+STIMI Q +G +GQ TD++I +E + V ++ + AKH G++
Sbjct: 111 LLLSAGTKGKRHALPNSTIMIHQVLGGYQGQGTDIQIHAQETQRVSDQISNILAKHTGQS 170
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 282
E+I D R + P+EA YG+ID + +T ++ +D
Sbjct: 171 IEKIHKDTNRDNFMPPAEAKNYGLIDSI-FTHRNQKD 206
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M V+P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L ++H G+ E+IE D R + SP E++EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESMEYGLIDRVI 188
Query: 275 YTEKSP 280
E+ P
Sbjct: 189 --ERRP 192
>gi|343503058|ref|ZP_08740893.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|418480506|ref|ZP_13049564.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342812728|gb|EGU47720.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|384571898|gb|EIF02426.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 208
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 9/214 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K RI++L + L++A+
Sbjct: 2 SYQEKNAMSPILNALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDQMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M Y+KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQYIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
E IE D R + S +AVEYG++D VL K
Sbjct: 174 PLEVIERDTDRDNFMSSDQAVEYGLVDSVLTHHK 207
>gi|402487234|ref|ZP_10834056.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. CCGE
510]
gi|401813808|gb|EJT06148.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium sp. CCGE
510]
Length = 202
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPIYLYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIYLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++ P+ TLC+G A + LL AG G RA LP+++I+I QP G +
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERATLPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ K + +LYA+H G++ E E + R ++ +P EA+E+G+IDK++
Sbjct: 135 GQASDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTPQEALEWGLIDKIM 194
Query: 275 YTEKSPED 282
+ P D
Sbjct: 195 QVREVPAD 202
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V L++A+ L+L+ E+ +K I LYINS G G
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPG--------GL 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK + T+C+G A AA+LL AGAKG R ALP+S IMI QP+G E
Sbjct: 82 VTAGLAIYDTMQYVKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIHQPLGGAE 141
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A DVEI KE+ +K + ++ +KH G+ E+IE D R + S EA EYGIID+V+
Sbjct: 142 GTAKDVEILTKELLRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEYGIIDRVI 201
>gi|168031792|ref|XP_001768404.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680329|gb|EDQ66766.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 13/204 (6%)
Query: 79 MVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
MVI TS + D+ S L K RIV + L++A+ LYL+ E +KPI+L
Sbjct: 1 MVIEHTS---RGERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLYLESEHPDKPIHL 57
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M Y++ P+ TLCVG A +LLL AG G R +
Sbjct: 58 YINSPG--------GVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGQPGERRS 109
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LP++ +MI QP G GQA+D+ I +E+ +++A L +LY KH G T E+IE+ + R +
Sbjct: 110 LPNARVMIHQPSGGASGQASDIAIQAREILDMRARLSRLYVKHTGHTYEKIESSMERDHF 169
Query: 259 FSPSEAVEYGIIDKVLYTEKSPED 282
SP EA ++G++D+V+ E+ PE+
Sbjct: 170 MSPEEAKQFGLVDEVI--ERRPEN 191
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 14 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 66 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A G+ E+IE D R + S +A EYGIIDKVL
Sbjct: 126 GQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 185
Query: 275 YTEKSPE 281
T SPE
Sbjct: 186 -TSSSPE 191
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 78 TMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
T IP+ T + D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I
Sbjct: 3 TYYIPYVIEQTGRGERSYDIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDI 62
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
+LYINS G G T AIYD M Y+K P+ T+CVG A AA+LL GA+G R
Sbjct: 63 HLYINSPG--------GSVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKR 114
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
ALP++ +MI QP+G GQA+D+EI + + N + + + A+H G+ E++ D R
Sbjct: 115 LALPNAEVMIHQPLGGTSGQASDIEIHARNILNTRKRMNAILARHTGQDVEKVAQDTDRD 174
Query: 257 KYFSPSEAVEYGIIDKVL 274
+ + EA++YG+ID+++
Sbjct: 175 NFMTAQEALDYGLIDRII 192
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V +++A+ L+LQ ED EK I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG--------GM 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M YVKP I T C+G A A +LL AG KG R ALP S +MI QPIG
Sbjct: 71 VSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFY 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATDVEI KE+ +K L + AKH G+ E+I+ D R + S EA YGI+D+V+
Sbjct: 131 GQATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAKLYGIVDEVI 190
Query: 275 YTEK 278
+ K
Sbjct: 191 SSIK 194
>gi|403387723|ref|ZP_10929780.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
JC122]
Length = 194
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 115/184 (62%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLGEEVNSTTASLIVAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T+ AIYD M Y+KP + T+C G A A LL +GAKG R ALP+S IMI QP+G +
Sbjct: 71 ITDGMAIYDTMNYIKPDVVTICTGLAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFK 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I K + +K L ++ +++ GK+ E I+ D+ R + S EA EYG+ID+V+
Sbjct: 131 GQATDIDIHAKRIIRIKETLNEILSENTGKSLEVIKKDVERDYFMSAEEAKEYGLIDEVI 190
Query: 275 YTEK 278
+K
Sbjct: 191 IKKK 194
>gi|320540337|ref|ZP_08039989.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
gi|320029657|gb|EFW11684.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
Length = 207
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P ++ MV+ TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 9 QCAPNMALVPMVVEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E EK I+LYINS G G T +IYD M ++KP + T+C+G A + LL
Sbjct: 66 AESPEKDIFLYINSPG--------GVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAK R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L A+H G++ Q
Sbjct: 118 TAGAKSKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQSLAQ 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ + EAVEYG++D +L
Sbjct: 178 IECDTERDRFMTADEAVEYGLVDGIL 203
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 115/193 (59%), Gaps = 8/193 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K+RIV+LG ++ +I+A+ L+L+ ED EK I+LYINS G
Sbjct: 11 TARGERSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDIFLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+CVG A A+LL AG KG R ALP S IMI
Sbjct: 69 ------GVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRIMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQATD+EI +E+ +K L + +H G E+I+ D R + + +A
Sbjct: 123 HQPLGGAQGQATDIEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQARA 182
Query: 267 YGIIDKVLYTEKS 279
YGIID+V+ + +
Sbjct: 183 YGIIDEVIQSRSA 195
>gi|359447956|ref|ZP_09237512.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
gi|392538775|ref|ZP_10285912.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
marina mano4]
gi|358046180|dbj|GAA73761.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 122/210 (58%), Gaps = 21/210 (10%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ I D R + S SEAVEYG++D V
Sbjct: 170 PLDVISKDTDRDNFMSASEAVEYGLVDSVF 199
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + ++ LI+A+ LYL+ E+ E+PI +YINS G G
Sbjct: 22 DIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQPISMYINSQG--------GV 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ PI TLCVG A A+LLL AG KG+R +LP+S IM+ QP G +
Sbjct: 74 VTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNSRIMLHQPSGGFQ 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E+ + L K+YAKH G++ E IE + R ++ S EA ++G+ID+V+
Sbjct: 134 GQASDIRIHAEEIARLSKRLNKIYAKHTGQSEELIEETLDRDRFQSADEAQQFGLIDEVI 193
Query: 275 YTEKSPED 282
T E+
Sbjct: 194 ETRPVTEE 201
>gi|332300233|ref|YP_004442154.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
asaccharolytica DSM 20707]
gi|332177296|gb|AEE12986.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
asaccharolytica DSM 20707]
Length = 238
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 112/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI++LG +I A+ LYL D K I +YINS G G
Sbjct: 50 DVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPG--------GS 101
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
F IYD M YV + T+C G A AA+LL AGA+G R ALP S +MI QP+G ++
Sbjct: 102 VYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQ 161
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA KE+ VKAEL K+ A H G++ E IE D R K+ + SEA+EYG+IDKVL
Sbjct: 162 GQASDIEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALEYGMIDKVL 221
Query: 275 YTEK 278
+ K
Sbjct: 222 TSTK 225
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386038858|ref|YP_005957812.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343094896|emb|CCC83105.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 198
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A G+ E+IE D R + S +A EYGIIDKVL
Sbjct: 131 GQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
Query: 275 YTEKSPE 281
T SPE
Sbjct: 191 -TSSSPE 196
>gi|313885801|ref|ZP_07819544.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
gi|312924705|gb|EFR35471.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
Length = 238
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 112/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L +RI++LG +I A+ LYL D K I +YINS G G
Sbjct: 50 DVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYINSPG--------GS 101
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
F IYD M YV + T+C G A AA+LL AGA+G R ALP S +MI QP+G ++
Sbjct: 102 VYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQPMGGMQ 161
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EIA KE+ VKAEL K+ A H G++ E IE D R K+ + SEA+EYG+IDKVL
Sbjct: 162 GQASDIEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALEYGMIDKVL 221
Query: 275 YTEK 278
+ K
Sbjct: 222 TSTK 225
>gi|290969192|ref|ZP_06560717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|335049502|ref|ZP_08542492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
gi|290780698|gb|EFD93301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|333762762|gb|EGL40247.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 199-6]
Length = 200
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++M +P T+ + DL S L K+RI++L ++ ++A+ L+L+ ED +K
Sbjct: 1 MSMYVPVVVEQTSQGERSYDLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLEAEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M Y+KP + T+CVG+A A++LL AG KG
Sbjct: 61 IYLYINSPG--------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLAAGTKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP S +MI QP+G ++GQATD+EI +E+ V+ EL + A H G+ + IE D R
Sbjct: 113 RFALPHSQVMIHQPLGGVQGQATDIEIHTREILRVRRELNGILAAHTGQPLDVIEKDTER 172
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ + +A YG+ID++L
Sbjct: 173 DNFLTAEDAKHYGLIDEIL 191
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L L ++H G+ E+IE D R + S E+V+YG+ID V+
Sbjct: 129 GQATDIEIQAKEILYHKKRLNTLLSEHTGQPLERIEQDTERDFFMSAKESVDYGLIDLVI 188
>gi|392395333|ref|YP_006431935.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526411|gb|AFM02142.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 202
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 116/190 (61%), Gaps = 11/190 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLIVAQMLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI---G 211
+ AIYD M Y++ + T+CVG A A LL AGAKG R+ALP++ I+I QP+ G
Sbjct: 72 ISAGMAIYDTMQYIRSDVHTICVGLAASMGAFLLTAGAKGKRSALPNAEILIHQPLIGGG 131
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
I GQAT++EI K + VK + ++ A+ G+T E+IEAD R +Y + EA EYG+ID
Sbjct: 132 GISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLID 191
Query: 272 KVLYTEKSPE 281
+V PE
Sbjct: 192 EVFEKANKPE 201
>gi|238795542|ref|ZP_04639057.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
gi|238720661|gb|EEQ12462.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
Length = 194
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK+ + +L A H GK+ E+IE D R ++ S EAV YG++D V
Sbjct: 131 GQATDIEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEAVGYGLVDSVF 190
>gi|443315108|ref|ZP_21044618.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785290|gb|ELR95120.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 206
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
L++ RI++L S+ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LFRERIIFLSEEVTDSIANAIVAYLLYLDSEDNTKPIYLYINSPG--------GSVTAGM 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATD 219
AIYD M Y+K + T+CVG A A LL AG KG R ALP + IMI QP+ GQATD
Sbjct: 79 AIYDTMQYIKAEVITICVGLAASMGAFLLAAGTKGKRTALPHARIMIHQPLSGARGQATD 138
Query: 220 VEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
+EI KE+ VK L K+ A+ GKT E+IE D R + S EA YG+ID+V+ E++
Sbjct: 139 IEIEAKEVLRVKHTLNKMLAERTGKTLEEIERDTDRDYFLSAQEAARYGLIDRVI-EERA 197
Query: 280 PE 281
PE
Sbjct: 198 PE 199
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + ++ LI+A+ LYL ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AG KG R +LP+S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K +L + A+H G+ E+IE D R + SP EA++YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYHKRKLNEHLAEHTGQPLERIEQDTERDFFMSPQEAMDYGLIDQVI 188
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + + L K+ ++ G+ E+IE D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAKEYGLIDEVM 190
Query: 275 YTEKS 279
EK+
Sbjct: 191 EPEKA 195
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V+ I+++ L+L+ ED +K I LYINS G G
Sbjct: 18 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+C+G A A+LL AGAKG R +LPSS IMI QP+G +
Sbjct: 70 VTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGVR 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ ++A+L L KH G+ E++E D R Y +E+ YGIID++
Sbjct: 130 GQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIIDEI 188
>gi|424920020|ref|ZP_18343383.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392849035|gb|EJB01557.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 203
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ K + +LYA+H G++ E E + R ++ + EA+E+G+IDK++
Sbjct: 135 GQATDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMTSQEALEWGLIDKIM 194
Query: 275 YTEKSPEDH 283
+ P D
Sbjct: 195 QLREVPADQ 203
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|418576800|ref|ZP_13140932.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|124013830|sp|Q49VZ2.1|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|379324465|gb|EHY91611.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 194
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 115/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L ++ A+ G++ E+IE D R + S EA +YG++D+V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYGLVDQVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|452943368|ref|YP_007499533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
gi|452881786|gb|AGG14490.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. HO]
Length = 205
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
K +I ++P EQ P D+ S L ++RIV LG V LI+A+ L
Sbjct: 5 KDYQRIIDQLVPIV----VEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLL 60
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ +D EK I +YINS G G T AIYD M Y+KP + T+C+G A A
Sbjct: 61 FLEAQDPEKDIQMYINSPG--------GSVTAGLAIYDTMQYIKPDVTTICIGQAASMGA 112
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
+LL AGAKG R ALP++ IMI QP+G ++GQATD+ I +E+K +K L + A GK+
Sbjct: 113 VLLAAGAKGKRFALPNARIMIHQPLGGVQGQATDILIHAEEIKRIKHILNTILANATGKS 172
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
QIE D+ R + S EA YG+IDKV+
Sbjct: 173 LRQIEKDVDRDYFMSAEEAKNYGLIDKVI 201
>gi|332016545|gb|EGI57426.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Acromyrmex echinatior]
Length = 224
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L V ++A+ L+LQ E + PI+LYINS G G
Sbjct: 30 DIYSRLLKERIICLMGPVTDVVASAVIAQLLFLQSESSKNPIHLYINSPG--------GS 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PPI T CVG A A+LLL AG KG R +LP++ IMI QP G ++
Sbjct: 82 VTAGLGIYDTMQYVLPPISTWCVGQACSMASLLLAAGTKGMRHSLPNARIMIHQPSGGVQ 141
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ +LY KH G+ E+I + R + SP++A E+GIIDKVL
Sbjct: 142 GQATDIQIQATEILKLKQQINELYVKHTGQNLEEIAKSMERDNFMSPTQAKEFGIIDKVL 201
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Query: 78 TMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
T+V TA + D+ S L K+RIV++G V LI+A+ L+L+ ED +K I+
Sbjct: 3 TLVPIVVEQTARGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIH 62
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++P + T+C+G A A LL AG G R
Sbjct: 63 LYINSPG--------GLVTSGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRF 114
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP + IM+ QP+G ++GQAT+++I +E+ K L +L AKH G+ E+IE D R
Sbjct: 115 ALPYARIMMHQPLGGVQGQATEIDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDF 174
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
+ SP +A EYGIID+V+ K
Sbjct: 175 FMSPEQAREYGIIDEVITVRK 195
>gi|392408625|ref|YP_006445232.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
gi|390621761|gb|AFM22968.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfomonile
tiedjei DSM 6799]
Length = 197
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 115/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L K RIV+LG V LI+A+ L+L+ E+ +K I
Sbjct: 1 MLVPIVVEQTSRGERSYDIYSRLLKERIVFLGTGVDDYVANLIIAQLLFLESEEPDKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINS G G T AIYD M Y+KP I T+C+G A ALLL AG G R
Sbjct: 61 FYINSPG--------GIVTSGLAIYDTMQYIKPDIQTICIGQAASMGALLLAAGTHGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP + I+I QP+G +GQATD+EI +E+ +++EL + KH G+ E+IEAD R
Sbjct: 113 ALPHARILIHQPMGGFQGQATDIEIHAREILRMRSELNDILVKHTGQPRERIEADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA YGI+D V+
Sbjct: 173 FMSGQEAATYGIVDHVI 189
>gi|407696210|ref|YP_006820998.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
gi|407253548|gb|AFT70655.1| ATP-dependent Clp protease proteolytic subunit [Alcanivorax
dieselolei B5]
Length = 216
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 11/219 (5%)
Query: 58 RPDCLNPDSFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSV 116
R L P+ K+ P T ++P T+ + D+ S L K R+++L +
Sbjct: 6 RITSLTPE--MKTLMADPTATGLVPIVVEQTSRGERQFDIYSRLLKERVIFLIGQVEDYM 63
Query: 117 TELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLC 176
LI+A+ L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C
Sbjct: 64 ANLIVAQMLFLESENPDKDIHLYINSPG--------GSVTAGMSIYDTMQFIKPEVSTMC 115
Query: 177 VGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVK 236
VG A A LL AGA+G R ALP S +MI QP+G +GQA+D+EI KE+ +KA+L +
Sbjct: 116 VGQAASMGAFLLAAGAEGKRLALPHSRVMIHQPLGGFQGQASDIEIHAKEILKIKAQLNE 175
Query: 237 LYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
L AKH G+ E +E D R + S +A EYG+ID+V++
Sbjct: 176 LLAKHTGQPLEVLERDTDRDNFMSAEQAREYGLIDQVVH 214
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +I+A+ L+L+ +D +K I+LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YVKP I T+C+G A A+LL AGAKG R +LP S IMI QP G E
Sbjct: 72 VTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMIHQPWGGAE 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A D++I +E+ +K +L + +KH G++ E+IE D R + + EA+ YG+IDKV+
Sbjct: 132 GTAIDIQIHAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMNAQEALNYGLIDKVI 191
Query: 275 YTE 277
T+
Sbjct: 192 TTK 194
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +S IMI QP+G +GQATD+ I KE+ +K EL L A+H G++ E++ AD R
Sbjct: 113 SLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA YGIID ++
Sbjct: 173 FMSGEEAKNYGIIDAIV 189
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG L++A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++P + T+C+G A A LL AGAKG R +LP+S IMI QP+G +
Sbjct: 69 VSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +KA L + A H GK+ E+I AD R + S E+ EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVI 188
Query: 275 YTEKSPED 282
S D
Sbjct: 189 NRRPSASD 196
>gi|359437263|ref|ZP_09227333.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|359446707|ref|ZP_09236358.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
gi|358028087|dbj|GAA63582.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20311]
gi|358039513|dbj|GAA72607.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20439]
Length = 205
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 6 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 63 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
GAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ + +
Sbjct: 115 GGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVV 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
D R + S S+AV+YGI+D V S
Sbjct: 175 SRDTDRDNFMSASQAVDYGIVDSVFTNRGS 204
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V+ I+++ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+C+G A A+LL AGAKG R +LPSS IMI QP+G +
Sbjct: 73 VTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIHQPLGGVR 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ ++A+L L KH G+ E++E D R Y +E+ YGIID++
Sbjct: 133 GQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAYGIIDEI 191
>gi|427412668|ref|ZP_18902860.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
gi|425716475|gb|EKU79459.1| ATP-dependent Clp protease proteolytic subunit [Veillonella ratti
ACS-216-V-Col6b]
Length = 197
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIVFLGGPINDDVANLVIAQLLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL L A H G+ + I D R + S +AV+YG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGLLASHSGQPIDVIARDTDRDNFMSAEDAVKYGLIDEVL 189
>gi|451948362|ref|YP_007468957.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
gi|451907710|gb|AGF79304.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfocapsa
sulfexigens DSM 10523]
Length = 200
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 115/189 (60%), Gaps = 9/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG S VT I+A+ L+L+ ED +K I YINS G G
Sbjct: 19 DIYSRLLRERIVFLGTSVGDDVTSSIVAQLLFLEAEDPDKDITFYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK I TLC+G A ALLL AG G R ALP+S IMI QP+G +
Sbjct: 71 VTAGLAIYDTMQYVKCDIATLCMGQAASMGALLLAAGTAGKRYALPNSRIMIHQPMGGYQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA++++I +E+ ++ +L K+ A H G T ++++ D R + SP EA +YGIID+VL
Sbjct: 131 GQASEIDIHAQEILRMRDDLNKILAYHTGHTVKKLQKDTDRDNFMSPLEAQKYGIIDEVL 190
Query: 275 YTEKS-PED 282
K PED
Sbjct: 191 SKRKDKPED 199
>gi|374314210|ref|YP_005060639.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Serratia symbiotica str.
'Cinara cedri']
gi|363988436|gb|AEW44627.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Serratia symbiotica str.
'Cinara cedri']
Length = 211
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K K +P I +V TA + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 6 KKKQFTPNIALVPMVVEQTAGVERSYDIYSRLLKERIIFLIGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++ + T+C+G A +LLL
Sbjct: 66 AENPEKDIFLYINSPG--------GVITAGMSIYDTMQFITSNVSTICIGQACSMGSLLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R L +S +MI QP+G +GQATD+EI +E+ VKA + +L A+H GK+ +
Sbjct: 118 TAGTKGKRFCLSNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMTELMAEHTGKSLAE 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R ++ + +EAVEYG++D +L
Sbjct: 178 IEYDTERDRFMTATEAVEYGLVDGIL 203
>gi|392554152|ref|ZP_10301289.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
undina NCIMB 2128]
Length = 201
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K RI++L ++ LILA+ L+L+
Sbjct: 2 TDPLNALVPMVV---EQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLES 58
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 59 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLS 110
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
GAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ + +
Sbjct: 111 GGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVV 170
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
D R + S S+AV+YGI+D V S
Sbjct: 171 SRDTDRDNFMSASQAVDYGIVDSVFTNRGS 200
>gi|221065471|ref|ZP_03541576.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
gi|220710494|gb|EED65862.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
Length = 201
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P +A + D+ S L ++R+++L +V+ L+ A+ L+L+ E+ +KPI+
Sbjct: 6 MLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A+YD M ++K P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G ++GQA+D+ I +EM K + +LYA+H G++ +++E D+ R +
Sbjct: 118 ALPNASLHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA E+G+IDKVL
Sbjct: 178 FMTAKEAREWGLIDKVL 194
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 115/200 (57%), Gaps = 12/200 (6%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P + T W D+ + LY+ RI++LG + I+A LYL ED K
Sbjct: 6 PKVPYQLPGSQYTEW----VDIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNSK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIYLYINSPG--------GMVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGKKG 113
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP G GQATD+EI +E+ ++ +L ++YA + G+T E+IE D+
Sbjct: 114 KRLALPHSRIMIHQPSGGTRGQATDIEIEAREIIRIRHQLNQIYANNTGQTLEKIEKDMD 173
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA EYG+ID+V+
Sbjct: 174 RDFFLSAQEAKEYGLIDRVI 193
>gi|224147635|ref|XP_002336515.1| predicted protein [Populus trichocarpa]
gi|222835812|gb|EEE74247.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 123/197 (62%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P +A + D+ S L ++R+++L V+ L+ A+ L+L+ E+ +KPI+
Sbjct: 6 MLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDVVSALVCAQLLFLEAENPDKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A+YD M ++K P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G ++GQA+D+ I +EM K + +LYA+H G++ E++E D+ R +
Sbjct: 118 ALPNASLHVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA E+G+IDKVL
Sbjct: 178 FMTAEEAREWGLIDKVL 194
>gi|270261418|ref|ZP_06189691.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
gi|270044902|gb|EFA17993.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
Length = 197
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++L ++ EL+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 23 DIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENPEKPIHLYINSPG--------GA 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M ++ + TLC+G A + LL AG G+RAALP++++ + QP+G +
Sbjct: 75 ITSGFAIYDTMRFINAQVHTLCMGTARSMGSFLLMAGEPGHRAALPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +++LYA+H G + E++E + R ++ + EAVE+G++D+VL
Sbjct: 135 GQASDIFIHAEEMRRTKDLVIRLYAEHCGHSAEEVEQVLDRDRFMTADEAVEWGLVDRVL 194
>gi|410612507|ref|ZP_11323584.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
gi|410167848|dbj|GAC37473.1| ATP-dependent Clp protease, protease subunit [Glaciecola
psychrophila 170]
Length = 214
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TA + D+ S L K +++L + LI+A+ L+L+ E+
Sbjct: 8 PTNALVPMVV---EQTAKGERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQLLFLEAEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL AG
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPNVSTVCIGQAASMGAFLLSAG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R LP+S +MI QP+G +GQA+D EI KE+ ++K ++ +L AKH G+ E++
Sbjct: 117 EKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAKHTGQEYEKVAQ 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S ++AVEYG+ID+VL
Sbjct: 177 DTDRDNFLSATDAVEYGLIDQVL 199
>gi|336315652|ref|ZP_08570560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rheinheimera
sp. A13L]
gi|335879971|gb|EGM77862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rheinheimera
sp. A13L]
Length = 207
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 10/206 (4%)
Query: 71 KPR-SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+PR + ++ ++P TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 4 EPRMNELVNALVPIVIEQTAKGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLE 63
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK IY+YINS G G T +IYD M Y+KP I T+CVG A A LL
Sbjct: 64 SENPEKDIYIYINSPG--------GSVTAGMSIYDTMKYIKPNIATVCVGQACSMGAFLL 115
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
G KG R LP++ +MI QP+G +GQATD EI +E+ +K +L +L A+H GKT EQ
Sbjct: 116 SGGTKGKRYCLPNARVMIHQPLGGFQGQATDFEIHAREILYIKEKLNRLMAEHCGKTYEQ 175
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
+ D R + S +A+EYG+ID +L
Sbjct: 176 VCKDTERDNFLSAQQALEYGLIDAIL 201
>gi|428222892|ref|YP_007107062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
gi|427996232|gb|AFY74927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7502]
Length = 214
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG SV +++++ L+L+ ED +K IY+YINS G G
Sbjct: 38 DIFSRLLRERIIFLGTEVNDSVASVMMSQLLFLEAEDPQKDIYVYINSPG--------GS 89
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +V+P + T+C+G A A LL AGAKG R +LP+S IMI QP+G
Sbjct: 90 VTSGMAIYDTMQHVRPDVSTICMGLAASMGAFLLSAGAKGKRLSLPNSRIMIHQPLGGAR 149
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ K L KL A+H G+ ++IE D R + SP+EA YG+ID+VL
Sbjct: 150 GQAVDIEIQAKEILYHKRTLNKLLAEHTGQPLDKIEQDTERDFFMSPAEAKNYGLIDQVL 209
>gi|365174864|ref|ZP_09362302.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
gi|363613729|gb|EHL65234.1| ATP-dependent Clp protease proteolytic subunit [Synergistes sp.
3_1_syn1]
Length = 194
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANLVVAQMLFLESEDPDKDISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y++P + T+C+G A A+LL AGA G R ALP++ IMI QP+G ++
Sbjct: 72 VSAGLAIYDTMQYIRPNVSTICLGMAASMGAVLLTAGADGKRLALPNAKIMIHQPMGGMQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ + +L ++ AKH + ++IEAD R Y S EA++YGI+DK++
Sbjct: 132 GQASDIEIHAKEILKTREKLNEILAKHTRQPLDKIEADTDRDYYMSAEEALKYGIVDKII 191
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ G A + D+ S L K+RI++L V L++AE L+L+ ++ EK
Sbjct: 2 PLIPMVVE-NEGRA--ERSYDIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I LYINS G G T AIYD M Y+K + T+C+G A A LL G KG
Sbjct: 59 DIQLYINSPG--------GSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLACGEKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALPSS IMI QP+G +GQ++DVEI K + + ++ K+ +K GKT + IE D
Sbjct: 111 KRIALPSSEIMIHQPLGGFQGQSSDVEIHAKRLLKTREDINKILSKRTGKTLKTIEKDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA+EYG+IDKV+
Sbjct: 171 RDNFMSAKEAMEYGLIDKVI 190
>gi|339483339|ref|YP_004695125.1| ATP-dependent Clp protease proteolytic subunit [Nitrosomonas sp.
Is79A3]
gi|338805484|gb|AEJ01726.1| ATP-dependent Clp protease proteolytic subunit [Nitrosomonas sp.
Is79A3]
Length = 213
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Query: 65 DSFCKSKPRS-PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAE 123
D+ +P++ +I MVI TSG + D+ S L K R+V+L + L++A+
Sbjct: 6 DNMYDLEPKNLGLIPMVIE-TSGRG--ERAYDIYSRLLKERVVFLVGPVTETTANLVVAQ 62
Query: 124 FLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGE 183
FL+L+ E+ EK I+ YINS G G + AIYD M Y+KP + TLC+G A
Sbjct: 63 FLFLESENSEKDIHFYINSPG--------GMVSAGLAIYDTMQYIKPDVSTLCIGQAASM 114
Query: 184 AALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFG 243
ALLL AGAKG R LP+S +MI QP+G +GQA+D+EI +E+ +KA L ++ AKH G
Sbjct: 115 GALLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAREILYLKARLNEIMAKHAG 174
Query: 244 KTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ +E D R + S E+V YG++D VL
Sbjct: 175 RPVSDLEKDTDRDNFMSAVESVNYGLVDAVL 205
>gi|424887930|ref|ZP_18311533.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|424895332|ref|ZP_18318906.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393173479|gb|EJC73523.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393179559|gb|EJC79598.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 203
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++ P+ TLC+G A + LL +G G R ALP+S+I I QP+G +
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMSGQPGERTALPNSSIHIHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G+T E+ E + R ++ + EAVE+G+ID++L
Sbjct: 135 GQASDMFIHAEEMRRTKHRMTRLYAEHCGRTYEEFEQAMDRDRFMTAEEAVEWGLIDRIL 194
Query: 275 YTEKSPED 282
+ D
Sbjct: 195 QVREDTTD 202
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RIV+LG + +++ L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +S IMI QP+G +GQATD+ I +E+ +K +L +L A+H G+ E++EAD R
Sbjct: 113 SLTNSRIMIHQPLGGFQGQATDIHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S +A YGIID ++
Sbjct: 173 FMSGEDAKNYGIIDSII 189
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 11/205 (5%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K+RI++LG + LI+A+ L+L+ ED EK I
Sbjct: 1 MLIPMVIESTNRGERAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T IYD M YVKPPI T+C+G A ALLL AG +G R
Sbjct: 61 LYINSPG--------GSVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRH 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ +MI QP+G +GQAT+++I +E+ ++ L ++ ++H G+ E+I D R
Sbjct: 113 ALPNARVMIHQPMGGFQGQATEIDIHAREILKIRERLNQILSEHTGQALEKISQDTERDY 172
Query: 258 YFSPSEAVEYGIIDKVLY--TEKSP 280
+ S +EA +YG+ID+V+ +EK P
Sbjct: 173 FMSGTEAKDYGLIDEVIVRASEKVP 197
>gi|386392769|ref|ZP_10077550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. U5L]
gi|385733647|gb|EIG53845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. U5L]
Length = 204
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 122/213 (57%), Gaps = 16/213 (7%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P I +VI T + D+ S L ++RI+ LG + V LI A+ L+L+ ED EK
Sbjct: 2 PTIPIVI---ETTGRSERAYDIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I++YINS G G T AIYD M YV P + TLC+G A ALLL AGA G
Sbjct: 59 EIFMYINSPG--------GSVTAGLAIYDTMQYVLPKVSTLCMGQAASMGALLLCAGATG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP+G +GQATD++I +E+ ++ L ++ +H G+ E++ D
Sbjct: 111 MRYALPHSRIMIHQPMGGFQGQATDIDIHAREILRIRESLNEIMVRHTGQDLEKVRVDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYT-----EKSPED 282
R + + EAV YG+IDKVL + +K PE+
Sbjct: 171 RDYFMNADEAVAYGLIDKVLTSREPVAKKEPEE 203
>gi|422023827|ref|ZP_16370329.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
gi|414091842|gb|EKT53523.1| ATP-dependent Clp protease proteolytic subunit [Providencia sneebia
DSM 19967]
Length = 206
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 124/210 (59%), Gaps = 12/210 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K + ++ MVI TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 9 KLASQMALVPMVIEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG +G R LP+S +MI QP+G +GQATD+EI +E+ VKA + +L AKH GK+ E+
Sbjct: 118 TAGTEGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKARMNELMAKHTGKSIEE 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
I D R ++ S +EA EYG++D + YT +
Sbjct: 178 INRDTERDRFLSANEAKEYGLVDHI-YTSR 206
>gi|374301124|ref|YP_005052763.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554060|gb|EGJ51104.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 206
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 118/193 (61%), Gaps = 14/193 (7%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+ LG + LI A+ L+L+ ED +K IY+YINS G G
Sbjct: 21 DIYSRLLRDRIILLGYPIDDHIAGLICAQLLFLESEDPDKEIYMYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD MGY+ P+ TLC+G A A LL +G KG R +LP+S I+I QP+G +
Sbjct: 73 VTAGMAIYDTMGYISCPVSTLCIGQAASMGAFLLSSGTKGMRFSLPNSRILIHQPMGGFQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ ++A+L ++ A++ GK QIE D R + S EA+EYG+IDK++
Sbjct: 133 GQASDIDIHAREILRMRADLNRILAENTGKDLAQIERDTDRDYFMSAQEALEYGLIDKIM 192
Query: 275 Y------TEKSPE 281
+EK P+
Sbjct: 193 VSRGKTASEKGPK 205
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP G ++
Sbjct: 71 ITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L ++ +++ G+ E+I+AD+ R + + EA YGIID +L
Sbjct: 131 GQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 190
Query: 275 YTEK 278
K
Sbjct: 191 VRHK 194
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 115/199 (57%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
VI MV+ TS + D+ S L K RI++L + LI+A+ L+L+ ED EK
Sbjct: 3 VIPMVVEQTSKG---ERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKD 59
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IYLYINS G G T AIYD M ++KP + TLC G A A LL G KG
Sbjct: 60 IYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGK 111
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP++ +MI QP+G GQATD++I +E+ +K L + A+H G+T ++ AD R
Sbjct: 112 RFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTER 171
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S +EA YG+IDKVL
Sbjct: 172 DNFMSATEAKNYGLIDKVL 190
>gi|254409743|ref|ZP_05023524.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183740|gb|EDX78723.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 198
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + LY+ RI++LG +T I+A LYL ED K IYLYINS G G
Sbjct: 22 DIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNNKDIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++K + T+CVG A + LL AG +G R ALP S IMI QP G +
Sbjct: 74 VTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGKQGKRLALPHSRIMIHQPSGGVR 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ +L ++YA G+T E+IE DI R + S EA EYG+ID+V+
Sbjct: 134 GQATDIEIEAREILRIRRQLNQIYADKTGQTVEKIEKDIDRDFFMSAQEAKEYGLIDRVI 193
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M V+P + T+CVG A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L + A+H G+ E+IE D R + S EA +YG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKRRLNEFLAEHTGQPIERIEEDTERDFFMSAEEAKDYGLIDQVI 188
Query: 275 YTEKSP 280
SP
Sbjct: 189 DRRISP 194
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 12/188 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L K+ A+ G++ E+I+ D R + + EA EYG+ID V+
Sbjct: 131 GQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYGLIDNVM 190
Query: 275 YTEKSPED 282
PED
Sbjct: 191 ----QPED 194
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M V+P + T+C+G A A LL AGAKG R +LP+S IMI QP+G +
Sbjct: 69 VSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L + A H G+ E+IE D R + S +EA +YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKGKLNQHLADHTGQPLEKIEIDTDRDFFMSAAEAKDYGLIDQVI 188
Query: 275 YTEKSP 280
E+SP
Sbjct: 189 --ERSP 192
>gi|326505514|dbj|BAJ95428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 127/203 (62%), Gaps = 3/203 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 162 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 221
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 222 ASETDAYAIADFINRSKAKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNSITKLHLPKVH 281
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE++ ++L +K GK E++ +R P+YF EA++YG+ D
Sbjct: 282 KSGGAAIDMWIKAKELETNTDYYLELVSKGVGKPKEELAEFLRGPRYFRAQEAIDYGLAD 341
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQ 293
+L++ + S + + S L KAQ
Sbjct: 342 TILHSLDGSFKQKDLTSQLAKAQ 364
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V +L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KPP+ T+C+G A + LL AG KG R ALP + IMI QP+G ++
Sbjct: 72 VTAGLAIYDTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ +K L + A H G+ E++ D R + S EA +YGIID+V+
Sbjct: 132 GQATDIDIHAKEILRMKDLLNEKLAYHTGQPLEKVARDTERDFFMSAEEAKQYGIIDEVM 191
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M +++P + T+C+G A A LL GAKG R ALP + IMI QP+G +
Sbjct: 69 VYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G ATD+EI KE+ +K L L A H G+ E+IE D R + +P +A EYG+ID+V+
Sbjct: 129 GPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
Query: 275 YTEKSP 280
P
Sbjct: 189 TRRPQP 194
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+C+G A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +S IMI QP+G +GQATD+ I KE+ +K +L +L A+H G++ E++ AD R
Sbjct: 113 SLANSRIMIHQPLGGFQGQATDIHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA YGIID ++
Sbjct: 173 FMSGEEAKSYGIIDAIV 189
>gi|254456794|ref|ZP_05070222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|373867413|ref|ZP_09603811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|207085586|gb|EDZ62870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
gi|372469514|gb|EHP29718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sulfurimonas
gotlandica GD1]
Length = 196
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L +V I+A+ L+L+ ED EK IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y++P I T+C+G A A LL +G KG R ALP + IMI QP+G +
Sbjct: 71 VTAGMAIFDTMNYIRPHITTICIGQAASMGAFLLSSGEKGKRYALPHARIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I KE+ +KAEL ++ AK+ G++ +++E D R + S SEA EYG+ID+VL
Sbjct: 131 GQATDIAIQAKEILRMKAELNEILAKNTGQSVKKVEKDTDRDNFMSASEAQEYGMIDEVL 190
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A A LL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L +S IMI QP+G +GQATD+ I KE+ +K +L L A+H G++ E++ AD R
Sbjct: 113 SLVNSRIMIHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA YGIID ++
Sbjct: 173 FMSGEEAKNYGIIDAIV 189
>gi|229828304|ref|ZP_04454373.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
gi|229792898|gb|EEP29012.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
Length = 190
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED K I+LYINS G G
Sbjct: 16 DIYSRLLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLYINSPG--------GV 67
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL GAKG R ALP++ IMI QP G +
Sbjct: 68 VTCGMAIYDTMNYIKPDVSTICIGMAASMGAFLLAGGAKGKRYALPNAEIMIHQPSGGAK 127
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + K ++ ++ A + GKT EQ+ AD R Y EA+EYGI+D+++
Sbjct: 128 GQATEIEIAAESILKTKRKMNQILADNTGKTYEQVAADTERDHYLDAKEALEYGIVDQII 187
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 109/177 (61%), Gaps = 10/177 (5%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG ++ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDALANQIIAIMLYLDSEDPSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QA 217
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI QP+G I+G QA
Sbjct: 79 AIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGIQGRRQA 138
Query: 218 TDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
TD++I KE+ +K +L +L A H G++ E+IE D R + S EA+EYG+IDKV+
Sbjct: 139 TDIDIEAKEIIRIKHQLNELMAAHTGQSIEKIEKDTDRDYFMSAQEALEYGLIDKVI 195
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V L++A+ L+L+ ED EK I+ YINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDPEKDIHFYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A + LL AGAKG R ALP + IM+ QP+G ++
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALPYARIMLHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EI +E+ +K L +L AKH G+ E+I D R + S EA EYGIID+VL
Sbjct: 132 GQATEIEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMSAEEAKEYGIIDEVL 191
Query: 275 YTEK 278
K
Sbjct: 192 TYRK 195
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + TLCVG A AA LL AGAKG R ALP+S IMI QP G ++
Sbjct: 74 ITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQ 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L ++ +++ G+ E+I+AD+ R + + EA YGIID +L
Sbjct: 134 GQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 193
Query: 275 YTEK 278
K
Sbjct: 194 VRHK 197
>gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum SS9]
gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease,
proteolytic subunit [Vibrio vulnificus CMCP6]
[Photobacterium profundum SS9]
Length = 207
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQERNAMSPITDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GAKG R LP+S +MI QP+G +GQA+D++I KE+ +K L L AKH G+
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E +E D R + S +AVEYG++D VL
Sbjct: 174 PLEVVEGDTDRDNFMSADQAVEYGLVDSVL 203
>gi|327398620|ref|YP_004339489.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
gi|327181249|gb|AEA33430.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
Length = 205
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V+ +I+++ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLNGEINDDVSNVIVSQLLFLESEDPEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+C+G+A ALLL +G KG R +LP S IMI QP+G I
Sbjct: 71 VTAGLAIYDTMQYIKCDVTTICIGSAASMGALLLASGTKGKRYSLPHSRIMIHQPLGGIS 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EI KE+ +K L ++ AKH GK + IE D R + EA+ YGIIDK++
Sbjct: 131 GQATEIEIHAKEILRLKKLLNEILAKHTGKRLKTIEKDTERDYFMDTKEALAYGIIDKII 190
Query: 275 YT 276
Y+
Sbjct: 191 YS 192
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783.1|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+V+L LI+A+ L+L+ E+ +K IY YINS G G
Sbjct: 35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 87 VTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ ++ L + AKH G+T EQIE D R + S + AVEYG++DKVL
Sbjct: 147 GQASDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAAVEYGLVDKVL 206
>gi|323144789|ref|ZP_08079363.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
gi|322415435|gb|EFY06195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
Length = 200
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 11/201 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MVI TA + D+ S L K R++++ + +LI+A+ L+L+ +D +
Sbjct: 3 STLVPMVI---EQTARGERSFDIYSRLLKERVIFMTGEVEDHMADLIVAQLLFLESDDPD 59
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G T AIYD M Y+KP + TLC+G A + LL GA
Sbjct: 60 KDIYLYINSPG--------GVVTAGMAIYDTMQYIKPDVCTLCMGQACSMGSFLLAGGAP 111
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R ALP S IMI QP+G +GQA+D+ I +E + VK L +L AKH GK+ +++ D
Sbjct: 112 GKRFALPHSRIMIHQPLGGFKGQASDIMIHARETERVKRTLTELLAKHTGKSVDEVMQDC 171
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R + S EA+ YG+ID+V+
Sbjct: 172 DRDNFMSAEEALAYGLIDRVI 192
>gi|350409849|ref|XP_003488865.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Bombus impatiens]
Length = 242
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +V+ +++A+ L+LQ E+ + PI++YINS G G
Sbjct: 42 DIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSENSKNPIHMYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AG KG R +LP++ IM QP G +
Sbjct: 94 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGTKGMRHSLPNARIMTHQPSGGVS 153
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ LY KH G E+IE + R + SP+EA E+GIIDKVL
Sbjct: 154 GQATDIQIQALEILKLKKQINHLYVKHTGLDLEKIERCMERDNFMSPTEAKEFGIIDKVL 213
Query: 275 ---YTEKSPEDHGVVSDLKKA 292
E+ E LK+A
Sbjct: 214 SHPMQEEEAEAESTKLSLKEA 234
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 9/201 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L ++RI+ LG +V L++A+ L+L+ ED K I
Sbjct: 1 MLIPMVVEQTNRGERAYDIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD + ++KP + T+C+G A A LL AGAKG R
Sbjct: 61 LYINSPG--------GIVTAGLAIYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRY 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ IMI QP+G +GQATD+EI +E+ +KA+L ++ ++H G+ E++ D R
Sbjct: 113 ALPNARIMIHQPMGGFQGQATDIEIHAREILKLKADLNRMMSEHCGQPVEKVAQDTDRDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEK 278
+ S EA +YG+ID V+ + +
Sbjct: 173 FMSAKEAKDYGLIDSVITSHR 193
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + + L K+ ++ G+ E+IE D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEAKEYGLIDEVM 190
Query: 275 YTEKS 279
EK+
Sbjct: 191 EPEKA 195
>gi|423077037|ref|ZP_17065745.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
gi|361851989|gb|EHL04277.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfitobacterium hafniense DP7]
Length = 196
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 11/190 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 14 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI---G 211
+ AIYD M Y++ + T+CVG A A LL AGAKG R ALP++ I+I QP+ G
Sbjct: 66 ISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGG 125
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
I GQAT++EI K + VK + ++ A+ G+T E+IEAD R +Y + EA EYG+ID
Sbjct: 126 GISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTADEAKEYGLID 185
Query: 272 KVLYTEKSPE 281
+VL P+
Sbjct: 186 EVLEKPNQPK 195
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 17/205 (8%)
Query: 79 MVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
M++P EQ P D+ S L K+RIV+LG + V L++A+ L+L+ ED E
Sbjct: 1 MLVPIV----IEQTPRGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPE 56
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G + AIYD M ++KP + T+CVG A AA+LL AG K
Sbjct: 57 KDIYLYINSPG--------GEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDK 108
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R ALP S +MI QP+G G A D+EI +E+ +K L ++ A H G+ E+IE D
Sbjct: 109 GKRYALPHSRVMIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAHHTGQPIEKIERDT 168
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEK 278
R + S EA EYGI+D+VL ++K
Sbjct: 169 DRDFFMSAYEAKEYGIVDEVLESKK 193
>gi|347730688|ref|ZP_08863801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
gi|347520543|gb|EGY27675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
Length = 201
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + LI A+ L+L+ E+ EK IYLYINS G G
Sbjct: 18 DIYSRLLKDRIILLGTPIDDQIASLICAQLLFLESENPEKEIYLYINSPG--------GA 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ P+ TLC+G A ALLL AG G R ALP+S IMI QP G
Sbjct: 70 VTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGEPGMRHALPNSRIMIHQPSGGFS 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ +KA L + A+H G+ E++ D R + P+EA EYGIID +L
Sbjct: 130 GQASDIDIQAREVLRMKANLNDIMARHTGQPVERVADDTERDYFMGPAEAKEYGIIDSIL 189
Query: 275 YTEK 278
+ +
Sbjct: 190 TSRR 193
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 199
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 100 LYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAF 159
LY+ RI++LG S+ I+A LYL ED KPIYLYINS G G T
Sbjct: 27 LYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNSKPIYLYINSPG--------GSVTAGL 78
Query: 160 AIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QA 217
AIYD M ++K + T+CVG A A LL AG KG R ALP S IMI QP+G I+G QA
Sbjct: 79 AIYDTMQHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGIQGRRQA 138
Query: 218 TDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
TD+EI KE+ +K +L ++ A H G+ E+IE D R + S +EA EYG+IDKV+
Sbjct: 139 TDIEIEAKEILRIKHDLNEMMALHTGQPIEKIEKDTDRDYFMSAAEAKEYGLIDKVI 195
>gi|395225605|ref|ZP_10404124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
gi|394446228|gb|EJF07066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiovulum sp.
ES]
Length = 197
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L +V I+A+ L+L+ ED EK IY YINS G G
Sbjct: 19 DIYSRLLKDRIVMLSGEVNDAVASSIVAQLLFLEAEDPEKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M Y+KP + T+C+G A A LL AG KG R ALP++ IMI QP+G +
Sbjct: 71 ITSGMSIYDTMNYIKPQVSTICIGQAASMGAFLLSAGEKGKRYALPNARIMIHQPLGGAK 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K +L K+ +++ G++ E IE D R K+ S E+ +YG+IDKVL
Sbjct: 131 GQATDIQIQAEEILRMKRDLNKILSENTGQSIETIERDTERDKFMSAEESAQYGLIDKVL 190
Query: 275 YTEK 278
K
Sbjct: 191 SRHK 194
>gi|321468091|gb|EFX79078.1| hypothetical protein DAPPUDRAFT_231060 [Daphnia pulex]
Length = 235
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ + ++ L++A+ L+LQ E +KP+++YINS G G
Sbjct: 43 DIYSRLLKERIICVMGPITDDLSSLVVAQLLFLQSESNKKPVHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PPI T CVG A A+LLL +G+ G R +LP+S IMI QP G ++
Sbjct: 95 VTAGLGIYDTMQYVLPPIATWCVGQACSMASLLLASGSPGMRYSLPNSRIMIHQPSGGVQ 154
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K ++ +LY KH G IE+++ R K+ SP EA E+G+IDK+L
Sbjct: 155 GQATDIQIQAEEIMKLKKQINQLYGKHTGLQLSVIESNMERDKFMSPVEAKEFGLIDKIL 214
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K IYLYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIYLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GAKG R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|352085686|ref|ZP_08953277.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|389798002|ref|ZP_10201030.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
gi|351681627|gb|EHA64751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 2APBS1]
gi|388445897|gb|EIM01950.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter sp.
116-2]
Length = 209
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L V LI+A+ L+L+ E+ +K I YINS G
Sbjct: 19 TARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDKDINFYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + T+C+G A + LL AGAKG R ALP+S +MI
Sbjct: 77 ------GAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRVMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G +GQATD+EI +E+ ++ L KLY +H G+T E+IE D+ R ++ S ++A
Sbjct: 131 HQPSGGAQGQATDIEIQAREILYIRERLNKLYVQHTGQTLEKIELDMERDRFMSAADAKA 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDEVL 198
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 117/197 (59%), Gaps = 9/197 (4%)
Query: 79 MVIP-FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
++IP T T+ + D+ S L +RI++LG + V L++A+ L+L+ +D + IY
Sbjct: 7 ILIPTVTERTSHGERVYDIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIY 66
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M YVK P+ T+C G A AA++L AG +G R
Sbjct: 67 LYINSPG--------GIVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRY 118
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
LP+S ++I QP+G EGQATD+ I KE+ VK L ++ AKH GK +I+ D R
Sbjct: 119 CLPNSRVLIHQPLGGAEGQATDIAIQAKEILKVKDTLNQILAKHTGKNITKIKNDTERDF 178
Query: 258 YFSPSEAVEYGIIDKVL 274
Y +A EYGI+D++L
Sbjct: 179 YMDAKQAKEYGIVDEIL 195
>gi|254428693|ref|ZP_05042400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
gi|196194862|gb|EDX89821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
Length = 244
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R++++ + LI+A+ L+L+ E+ +K I+LYINS G
Sbjct: 60 TARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPG-- 117
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +IYD M ++KP + T+CVG A A LL AGA G R ALP++ +MI
Sbjct: 118 ------GSVTAGMSIYDTMQFIKPDVSTMCVGQAASMGAFLLTAGATGKRFALPNARVMI 171
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQA+D+EI KE+ +K +L L A H G+ EQ+E D R + S EA E
Sbjct: 172 HQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKE 231
Query: 267 YGIIDKVL 274
YGIID VL
Sbjct: 232 YGIIDAVL 239
>gi|225713510|gb|ACO12601.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L ++ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 41 DIYSRLLKDRIICLMGQVDDVISGLMVAQLLFLQAESGKKPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++PPI T CVG A +LLL AG KG R +LP+S IM+ QP G+
Sbjct: 93 VTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTKGMRHSLPNSRIMVHQPSGQSH 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ N++A L +Y KH G+ + +E + R + S +A+++G+IDKVL
Sbjct: 153 GQASDIQIQAQEILNLRARLNNIYVKHTGQPLDIVEKSMDRDNFMSADDALKFGLIDKVL 212
Query: 275 YTEKSP 280
T P
Sbjct: 213 ETPPKP 218
>gi|443476633|ref|ZP_21066529.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
gi|443018385|gb|ELS32644.1| ATP-dependent Clp protease proteolytic subunit [Pseudanabaena
biceps PCC 7429]
Length = 223
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 125/217 (57%), Gaps = 11/217 (5%)
Query: 62 LNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELIL 121
L + F + ++ V+ MV+ SG + D+ S L + RIV+LG + LI+
Sbjct: 8 LTSNQFAIASTQNQVVPMVVE-QSGKG--ERAFDIFSRLLRERIVFLGSQVDDTTANLIM 64
Query: 122 AEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
++ L+L+ ED +K IYLYINS G G AI D M +V+P + T+C+G A
Sbjct: 65 SQLLFLEAEDPDKDIYLYINSPG--------GSVYAGMAILDTMNHVRPDVCTICMGLAA 116
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKH 241
A LL +GAKG R +LP++ IMI QP+G +GQA D+EI +E+ +K L ++ A
Sbjct: 117 SMGAFLLASGAKGKRMSLPNARIMIHQPLGGAQGQAVDIEIQAREILYIKRSLNEMLATS 176
Query: 242 FGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
GK EQIE D R + SP+EA +YG+ID+VL K
Sbjct: 177 TGKPIEQIEQDTERDFFMSPAEAQQYGLIDQVLTNSK 213
>gi|206896158|ref|YP_002247153.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
gi|206738775|gb|ACI17853.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV++ P + +++A+ L+L+ ED ++ IY+YINS G G
Sbjct: 20 DIYSRLLRDRIVFINGEIEPEMAGVVIAQLLFLEAEDPKRDIYVYINSPG--------GI 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T+ AIYD M Y++P + T+C+G A AA+LL AG KG R ALP+S I++ QP+G ++
Sbjct: 72 VTDGLAIYDTMQYIEPDVVTMCIGQAASMAAILLAAGTKGKRFALPNSRILLHQPMGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ TDVEI KE+ +K + ++ + H G+ ++I D R +P EAV+YG+ID+V+
Sbjct: 132 GQVTDVEIQAKELVRIKQRINEILSVHTGQPIDRILQDTDRDFILTPDEAVQYGVIDQVI 191
Query: 275 YTEKSPED 282
ED
Sbjct: 192 TKRIRKED 199
>gi|313891581|ref|ZP_07825191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
gi|313120040|gb|EFR43222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
Length = 199
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 118/188 (62%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI++L + +I+A+ L+L+ ED +K I+LYINS G
Sbjct: 11 TSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+C+G+ AA+LL +GAKG R ALP S +MI
Sbjct: 69 ------GVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G ++GQAT++EI +E+ ++ EL + AKH G++ + I+ D R + + A++
Sbjct: 123 HQPLGGVQGQATEIEIHAREILRLRDELNGILAKHTGQSLDVIKKDTERDNFMTAENALK 182
Query: 267 YGIIDKVL 274
YG+IDK+L
Sbjct: 183 YGLIDKIL 190
>gi|225714260|gb|ACO12976.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L ++ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 41 DIYSRLLKDRIICLMGQVDDVISGLMVAQLLFLQAESGKKPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++PPI T CVG A +LLL AG KG R +LP+S IM+ QP G+
Sbjct: 93 VTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTKGMRHSLPNSRIMVHQPSGQSH 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ N++A L +Y KH G+ + +E + R + S +A+++G+IDKVL
Sbjct: 153 GQASDIQIQAQEILNLRARLNNIYVKHTGQPLDIVEKSMDRDNFMSADDALKFGLIDKVL 212
Query: 275 YTEKSP 280
T P
Sbjct: 213 ETPPKP 218
>gi|238791431|ref|ZP_04635069.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
gi|238729047|gb|EEQ20563.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
Length = 194
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 71 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK+ + +L A H GK E+IE D R ++ S EAV YG++D V
Sbjct: 131 GQATDIEIHAREILKVKSRMNELMALHTGKPLEEIERDTERDRFLSAEEAVGYGLVDSVF 190
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 23/217 (10%)
Query: 63 NPDSFCKSKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVT 117
NP + K +I ++P EQ P D+ S L ++RIV LG V
Sbjct: 3 NPKDYQK------IIDQLVPIV----VEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVA 52
Query: 118 ELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCV 177
LI+A+ L+L+ +D EK I +YINS G G T AIYD M Y+KP + T+C+
Sbjct: 53 NLIVAQLLFLEAQDPEKDIQMYINSPG--------GSVTAGLAIYDTMQYIKPDVTTICI 104
Query: 178 GNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKL 237
G A A+LL AG KG R ALP++ IMI QP+G ++GQATD+ I +E+K +K L +
Sbjct: 105 GQAASMGAVLLAAGTKGKRFALPNARIMIHQPLGGVQGQATDILIHAEEIKRIKHILNTI 164
Query: 238 YAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
A GK QIE D+ R + S EA YG+IDKV+
Sbjct: 165 LANATGKNLRQIEKDVDRDYFMSAEEAKNYGLIDKVI 201
>gi|434387492|ref|YP_007098103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
gi|428018482|gb|AFY94576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chamaesiphon
minutus PCC 6605]
Length = 203
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGGQVTSDLANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++P + T+C+G A A LL AGAKG R +LPSS IMI QP+G +
Sbjct: 69 VSAGMGIFDTMNQIRPDVSTVCMGFAASMGAFLLSAGAKGKRTSLPSSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I KE+ +K L L AKH G+ E+I+ D R Y S EA +YG+ID V+
Sbjct: 129 GQATDIAIQAKEILYIKGTLNDLLAKHTGQPLEKIQEDTDRDFYMSAVEAKDYGLIDTVI 188
>gi|406906710|gb|EKD47785.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 206
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K+RI++LG + +V LI+A+ L+L E+ +K I +YINS G
Sbjct: 24 TAQGERSYDIYSRLLKDRIIFLGTTIDGNVANLIIAQLLFLDNENPKKDITMYINSPG-- 81
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G+ T AIYD M ++K + T+CVG A A+LL GAKG R +LP++ +MI
Sbjct: 82 ------GHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVLLCGGAKGKRFSLPNAEVMI 135
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +EGQAT++EI K + K L +L AKH GK ++E D R + S +A++
Sbjct: 136 HQPLGGVEGQATEIEIHAKHILKTKTRLNELIAKHTGKKVSEVEKDTDRDNFMSAEDALK 195
Query: 267 YGIIDKVL 274
YG+IDK++
Sbjct: 196 YGLIDKIV 203
>gi|357040211|ref|ZP_09102000.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356875|gb|EHG04656.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 197
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G +V+ L++A+ L+L+ ED EK I +YINS G G
Sbjct: 20 DIYSRLLKDRIVFIGGPIDDTVSNLVIAQLLFLEAEDPEKDINIYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A + LL AGA G R ALP + IMI QP+G ++
Sbjct: 72 VTAGMAIYDTMQYVKPDVSTICLGQAASMGSFLLAAGAPGKRFALPYARIMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ +K L L AKH G+ +++ D R + S EA EYG+IDKV
Sbjct: 132 GQATDIDIHAKEILRMKDTLNDLLAKHTGQPRDKVARDTERDFFMSAEEAKEYGLIDKVF 191
Query: 275 YTEKS 279
K
Sbjct: 192 VRAKQ 196
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 108/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ L+L +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ IYD M +++P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +K L + A H G+ +IE D R + S EAV+YG+ID+V
Sbjct: 129 GQATDIEIQAKEILYLKKRLNQSLADHTGQPMSRIEQDTERDFFMSAQEAVDYGLIDQV 187
>gi|392959640|ref|ZP_10325122.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|421052494|ref|ZP_15515483.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|421058665|ref|ZP_15521332.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
gi|421066386|ref|ZP_15528000.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|421070550|ref|ZP_15531682.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392443225|gb|EIW20776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelosinus
fermentans B4]
gi|392448176|gb|EIW25379.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A11]
gi|392456193|gb|EIW32947.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans DSM 17108]
gi|392456278|gb|EIW33029.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans A12]
gi|392460320|gb|EIW36635.1| ATP-dependent Clp protease proteolytic subunit [Pelosinus
fermentans B3]
Length = 201
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G +V L++A+ L+L+ ED EK I++YINS G G
Sbjct: 19 DIFSRLLKDRIIFIGGPIDDNVANLVIAQLLFLESEDPEKDIHVYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G+A ALLL AGAKG R ALP + IMI QP+G +
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGSAASMGALLLTAGAKGKRYALPYARIMIHQPLGGTQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ L + +H G+T ++IE D R + S +A EYG+ID V+
Sbjct: 131 GQATDIEIHAREILRLRELLNGILIQHTGQTKDKIEHDTERDFFMSAEQAKEYGLIDAVV 190
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + +K L +++++ G+ E+I+ D R + S EA EYG+ID+V
Sbjct: 131 GQATDIEIHAKRILKIKETLNEIFSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEVF 190
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 116/188 (61%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G V L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G+A AA+LL AGA G R ALP + +MI QP+G +
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ ++ L + A+H GK E+I+ D R + S EA EYGIID V+
Sbjct: 131 GQATDIQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEAKEYGIIDAVV 190
Query: 275 YTEKSPED 282
+ +D
Sbjct: 191 VRGEQRKD 198
>gi|448241757|ref|YP_007405810.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
WW4]
gi|445212121|gb|AGE17791.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
WW4]
Length = 197
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+
Sbjct: 6 MLVPMVVEQTSRGERSFDIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++ P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAIYDTMQYIRAPVHTLCMGTARSMGSFLLMAGESGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G +GQA+D+ I +EMK K +++LYA+H G + E++E + R +
Sbjct: 118 ALPNASLHVHQPLGGFQGQASDILIHAEEMKRTKDTVIRLYAQHCGLSYEEVERVLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA +G+ID+VL
Sbjct: 178 FMTADEAAAWGLIDRVL 194
>gi|359453081|ref|ZP_09242406.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|414070583|ref|ZP_11406566.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
gi|358049849|dbj|GAA78655.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20495]
gi|410807037|gb|EKS13020.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
Bsw20308]
Length = 205
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 122/210 (58%), Gaps = 21/210 (10%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ I D R + S S+AV+YG++D V
Sbjct: 170 PLDVISKDTDRDNFMSASQAVDYGLVDSVF 199
>gi|410479152|ref|YP_006766789.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
gi|424867689|ref|ZP_18291469.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|124514481|gb|EAY55994.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
rubarum]
gi|387221743|gb|EIJ76256.1| Peptidase S14, ClpP [Leptospirillum sp. Group II 'C75']
gi|406774404|gb|AFS53829.1| peptidase S14, ClpP [Leptospirillum ferriphilum ML-04]
Length = 203
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 9/203 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP+ T + D+ S L K+RI++LG + V L++A+ L+L+ ED K I
Sbjct: 1 MLIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A+LL AGA G R
Sbjct: 61 LYINSPG--------GVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ IMI QP+G ++GQAT++EI +E+ ++ L + AKH ++ ++ D R
Sbjct: 113 ALPNARIMIHQPLGGVQGQATEIEIHAREILKMREHLNGILAKHTKQSLAKVSQDTDRDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEKSP 280
+ S +A YG++D V+ + + P
Sbjct: 173 FLSAEDAKAYGLVDSVISSHRGP 195
>gi|410636602|ref|ZP_11347195.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
gi|410143884|dbj|GAC14400.1| ATP-dependent Clp protease, protease subunit [Glaciecola lipolytica
E3]
Length = 209
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 119/205 (58%), Gaps = 8/205 (3%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P P+ +V TA + D+ S L K +++L + LI+A+ L+L+
Sbjct: 3 NNPIDPLNALVPMVVEQTAKGERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEA 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T AIYD M ++KP + T+CVG A A LL
Sbjct: 63 ENPEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTVCVGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
GAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ E++
Sbjct: 115 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLMAEHTGQDYEKV 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
D R + S SE+ EYG+ID+VL
Sbjct: 175 ARDTDRDNFLSASESKEYGLIDQVL 199
>gi|383848841|ref|XP_003700056.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Megachile rotundata]
Length = 241
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +V+ +++A+ L+LQ E + PI++YINS G G
Sbjct: 42 DIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSESSKNPIHMYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AG KG R +LP++ IM QP G +
Sbjct: 94 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGTKGMRHSLPNARIMTHQPSGGVS 153
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ +LY KH G E+IE + R + SP++A E+GIIDKVL
Sbjct: 154 GQATDIQIQALEILKLKKQINQLYVKHTGMELEKIEQCMERDNFMSPAKAKEFGIIDKVL 213
>gi|313683647|ref|YP_004061385.1| ATP-dependent clp protease proteolytic subunit clpp [Sulfuricurvum
kujiense DSM 16994]
gi|313156507|gb|ADR35185.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfuricurvum
kujiense DSM 16994]
Length = 198
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 114/187 (60%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V I+A+ L+L+ ED K IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDPVASSIVAQLLFLEAEDPAKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y++P + T+C+G A A LL +G KG R ALP + IMI QP+G +
Sbjct: 71 ITSGMAIFDTMNYIRPDVCTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +KAEL ++ AK+ G++ +++E D R + S +EAV YGIID+VL
Sbjct: 131 GQATDIEIQAKEILRMKAELNEILAKNCGQSVKKLEKDTDRDNFMSAAEAVTYGIIDEVL 190
Query: 275 YTEKSPE 281
++ E
Sbjct: 191 VQKEKEE 197
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
+ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E
Sbjct: 26 NTLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPE 82
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+YINS G G + IYD M Y++P + T+CVG A A LL +GAK
Sbjct: 83 RDIYIYINSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAK 134
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G RA+LP S IMI QP G GQ TD+ I +E++ ++ L +L A+H GK +QI D
Sbjct: 135 GKRASLPHSRIMIHQPSGGAHGQETDIIIQAREIEKIRKLLDELLARHTGKDVKQIREDS 194
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ + EA+EYGIID V PE
Sbjct: 195 ERDRWMNAEEALEYGIIDSVFEKRPMPE 222
>gi|436842089|ref|YP_007326467.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170995|emb|CCO24366.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 202
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S I +VI T T + D+ S L K+RI+ L V +I A+ L+L+ ED E
Sbjct: 2 SGTIPIVIETTGRT---ERAYDIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPE 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IY+YINS G G T AIYD M Y+ P+ TLC+G A A LL AG K
Sbjct: 59 KEIYMYINSPG--------GVVTAGMAIYDTMQYISAPVSTLCMGQAASMGAFLLSAGEK 110
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G+R +LP S I+I QP+G +GQATD+ I KE+ +K L + A + GK+ E++E D
Sbjct: 111 GHRYSLPHSRILIHQPLGGAQGQATDIGIQAKEILRLKKSLNSIMAANTGKSLEEVEKDT 170
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R + S +EAVEYG+IDK+L
Sbjct: 171 DRDYFMSAAEAVEYGLIDKIL 191
>gi|383935029|ref|ZP_09988467.1| ATP-dependent Clp protease, protease subunit [Rheinheimera
nanhaiensis E407-8]
gi|383703794|dbj|GAB58558.1| ATP-dependent Clp protease, protease subunit [Rheinheimera
nanhaiensis E407-8]
Length = 207
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
+ ++ ++P TA + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 8 NDIVNALVPIVIEQTAKGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENP 67
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
EK IY+YINS G G T +IYD M Y+KP I T+CVG A A LL G
Sbjct: 68 EKDIYIYINSPG--------GSVTAGLSIYDTMRYIKPDIATVCVGQAASMGAFLLSGGT 119
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG R LP++ +MI QP+G +GQATD EI +E+ ++K +L +L A+H GK+ EQ+ D
Sbjct: 120 KGKRYCLPNARVMIHQPLGGFQGQATDFEIHAREILSIKEKLNRLMAEHSGKSYEQVCKD 179
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +A+EYG++D +L
Sbjct: 180 TERDNFLSAQQALEYGLVDAIL 201
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+CVG A A LL AG+KG R ALP+S IMI QP+G E
Sbjct: 71 ITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEIMIHQPLGGAE 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI + + ++ +L + A+ G+ E+IE D R + S EA+EYG++DKVL
Sbjct: 131 GQASDIEIRARRILKLRDKLNHILAERTGQPLERIERDTDRDYFMSAEEALEYGLVDKVL 190
Query: 275 Y 275
+
Sbjct: 191 H 191
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243113|sp|Q24S49.1|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 11/190 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI---G 211
+ AIYD M Y++ + T+CVG A A LL AGAKG R ALP++ I+I QP+ G
Sbjct: 72 ISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAEILIHQPLIGGG 131
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
I GQAT++EI K + VK + ++ A+ G+T E+IEAD R +Y + EA EYG+ID
Sbjct: 132 GISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMTAEEAKEYGLID 191
Query: 272 KVLYTEKSPE 281
+VL P+
Sbjct: 192 EVLEKPNQPK 201
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 122/208 (58%), Gaps = 11/208 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
+ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E
Sbjct: 26 NSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPE 82
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+YINS G G + IYD M Y++P I T+CVG A A LL +G K
Sbjct: 83 RDIYIYINSPG--------GSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNK 134
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G RA+LP S IMI QP G +GQ TD+ I +E++ ++ L +L AKH G+ E++ D
Sbjct: 135 GKRASLPHSRIMIHQPSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDS 194
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ +P EA+EYG+ID + +PE
Sbjct: 195 ERDRWMNPQEALEYGLIDAIFEKRPTPE 222
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7.1|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 71 KPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
K RS V T+V G + D+ S L + RI++LG V++ ++A+ L+L+ E
Sbjct: 20 KSRSAVPTVVEQSGRG----ERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAE 75
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D K I +YINS G G T AIYD M + P + T+C G A A LL
Sbjct: 76 DPHKDIQIYINSPG--------GSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSG 127
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
GAKG R ALP+S IMI QP+G +GQA ++EI KE+ +K L L AKH ++ E+I
Sbjct: 128 GAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKIN 187
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
D R + SP EAVEYG+IDKV+ +K
Sbjct: 188 EDTERDYFLSPEEAVEYGLIDKVIKNDK 215
>gi|453062000|gb|EMF02995.1| ATP-dependent Clp protease proteolytic subunit [Serratia marcescens
VGH107]
Length = 193
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T+ + D+ S L ++RIV+L V E++ A+ L+L+ E+ EKPI+
Sbjct: 2 MLVPMVVEQTSRGERSFDIYSRLLRDRIVFLNGEVNDDVAEMLCAQLLFLEAENPEKPIH 61
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y++ P+ TLC+G A + LL AG G+R
Sbjct: 62 LYINSPG--------GVITSGLAIYDTMQYIRAPVHTLCMGTARSMGSFLLMAGESGHRM 113
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++++ + QP+G +GQA+D+ I +EMK K +++LYA+H G + E++E + R +
Sbjct: 114 ALPNASLHVHQPLGGFQGQASDILIHAEEMKRTKDTVIRLYAQHCGLSYEEVERVLDRDR 173
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA +G+ID+VL
Sbjct: 174 FMTADEAAAWGLIDRVL 190
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 46 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYINSPG--------GS 97
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 98 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQ 157
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +K L L A+H G+ E I D R + SP+EAVEYG+ID+V+
Sbjct: 158 GQAVDIEIQAQEILYLKETLNGLMAEHTGQPLETIAEDTDRDHFLSPAEAVEYGLIDRVV 217
Query: 275 YTEKSPEDHGVVSD 288
SP D G+V++
Sbjct: 218 ---DSPADGGIVTE 228
>gi|390456222|ref|ZP_10241750.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
peoriae KCTC 3763]
Length = 198
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 111/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A G+ E+IE D R + S +A EYGIIDKVL
Sbjct: 131 GQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
Query: 275 YTEKS 279
+ S
Sbjct: 191 TSSTS 195
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+LQ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G E
Sbjct: 71 ITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAE 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI + + ++ +L + A+ G+ ++IE D R + S EA+EYG++DKVL
Sbjct: 131 GQASDIEIRARRILKMRDKLNHILAERTGQPLDRIERDTDRDYFMSAEEALEYGLVDKVL 190
Query: 275 Y 275
+
Sbjct: 191 H 191
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG VT+ ++A+ L+L+ ED +K I +YINS G G
Sbjct: 29 DIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQIYINSPG--------GS 80
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M + P + T+C G A A LL GAKG R ALP+S IMI QP+G +
Sbjct: 81 VTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQ 140
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L ++H G++ E+I D R + SP EAV+YG+IDKV+
Sbjct: 141 GQAVEIEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYFLSPEEAVQYGLIDKVI 200
Query: 275 YTEK 278
+K
Sbjct: 201 KNDK 204
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
P ++M IPF T + D+ S L K+RIV+LG V +I+A+ L+L+ ED
Sbjct: 6 QPPLSMNIPFVVEQTHRGERSWDIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDP 65
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I LYINS G G T IYD M YV+ + T C+G A A LL GA
Sbjct: 66 DKDIRLYINSPG--------GVVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGA 117
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG R ALP++ IMI QP G GQATD+EI +E+ +KA+L ++ A+H G+T ++I AD
Sbjct: 118 KGKRFALPNARIMIHQPHGGASGQATDIEIQAREILRLKAKLNEIMARHSGRTVDEILAD 177
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + EA +YG+ID+VL
Sbjct: 178 TDRDNFMGADEAKKYGLIDEVL 199
>gi|348026429|ref|YP_004766234.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
gi|341822483|emb|CCC73407.1| ATP-dependent Clp protease proteolytic subunit [Megasphaera
elsdenii DSM 20460]
Length = 201
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 78 TMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
M +P TA + D+ S L K+RIV+LG +V I+A+ L+L+ E+ +K I
Sbjct: 3 NMYVPIVVEQTAQGERSYDIYSRLLKDRIVFLGGPIDDAVANSIIAQLLFLEAENPDKDI 62
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
+LYINS G G T AIYD M Y+KP + T+CVG+A A++LL AGAKG R
Sbjct: 63 HLYINSPG--------GVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLTAGAKGKR 114
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
ALP S +MI QP+G ++GQAT++EI +E+ ++ EL + +KH G+ + I+ D R
Sbjct: 115 FALPHSQVMIHQPLGGVQGQATEIEIHAREILRMRKELNGILSKHTGQPIDVIQKDTERD 174
Query: 257 KYFSPSEAVEYGIIDKVL 274
+ + EA YG+ID++L
Sbjct: 175 NFMTAEEAKAYGLIDEIL 192
>gi|428312433|ref|YP_007123410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428254045|gb|AFZ20004.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 230
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 8/196 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + I+A+ L+L ED EK I LYINS G G
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIIAQLLFLDAEDPEKDIQLYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M ++P + T+C G A A LL AGA G R ALP+S IMI QP+G +
Sbjct: 95 VTAGMAMYDTMQQIRPDVVTICFGLAASMGAFLLTAGAPGKRMALPNSRIMIHQPLGGAQ 154
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K L +L A H G++ E+IEAD R + S +EA +YG+ID+V+
Sbjct: 155 GQAIDIEIQAREILYHKRTLNQLLAHHTGQSLEKIEADTERDFFMSAAEAKDYGLIDQVI 214
Query: 275 YTEKSPEDHGVVSDLK 290
+ P+ V+ +K
Sbjct: 215 TRQNLPKSEAAVTPIK 230
>gi|66515781|ref|XP_392540.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Apis mellifera]
Length = 237
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +V+ +++A+ L+LQ E+ + PI++YINS G G
Sbjct: 41 DIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSENSKNPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AG KG R +LP++ IM QP G +
Sbjct: 93 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGTKGMRHSLPNARIMTHQPSGGVS 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ LY KH G E+IE + R + SP EA E+GIIDKVL
Sbjct: 153 GQATDIQIQALEILKLKKQINNLYVKHTGLDLEKIERCMERDNFMSPKEAKEFGIIDKVL 212
>gi|380012458|ref|XP_003690300.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Apis florea]
Length = 236
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +V+ +++A+ L+LQ E+ + PI++YINS G G
Sbjct: 41 DIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSENSKNPIHMYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PP+ T CVG A A+LLL AG KG R +LP++ IM QP G +
Sbjct: 93 VTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGTKGMRHSLPNARIMTHQPSGGVS 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I E+ +K ++ LY KH G E+IE + R + SP EA E+GIIDKVL
Sbjct: 153 GQATDIQIQALEILKLKKQINNLYVKHTGLDLEKIERCMERDNFMSPKEAKEFGIIDKVL 212
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + + ++A+ L+L+ ED EK I LYINS G G
Sbjct: 41 DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P I T+C G A A LL G+KG R ALP+S IMI QP+G +
Sbjct: 93 VTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G++ E+I D R + SP EAVEYG+IDKV+
Sbjct: 153 GQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVV 212
>gi|343504824|ref|ZP_08742498.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
gi|343510911|ref|ZP_08748102.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|343517340|ref|ZP_08754346.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342793664|gb|EGU29454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. N418]
gi|342799857|gb|EGU35407.1| ATP-dependent Clp protease proteolytic subunit [Vibrio scophthalmi
LMG 19158]
gi|342810440|gb|EGU45523.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
ichthyoenteri ATCC 700023]
Length = 204
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 9/205 (4%)
Query: 71 KPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ ++ ++ ++P T+ + D+ S L K RI++L ++ L++A+ L+L+
Sbjct: 4 QEQNTIMNALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDNMANLVVAQLLFLES 63
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ +K I+LYINS G G T AIYD M ++KP + TLC G A A LL
Sbjct: 64 ENPDKDIFLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTLCTGQACSMGAFLLA 115
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
GAKG R ALP+S +MI QP+G +GQA+D++I +E+ ++K +L L A+H G+ + I
Sbjct: 116 GGAKGKRFALPNSRVMIHQPLGGFQGQASDIQIHAQEILSIKEKLNNLLAEHTGQPMDII 175
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R + S ++A EYGIID+VL
Sbjct: 176 ERDTDRDNFMSAAQAAEYGIIDQVL 200
>gi|299529913|ref|ZP_07043341.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
gi|298722085|gb|EFI63014.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
Length = 201
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 123/197 (62%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P +A + D+ S L ++R+++L +V+ L+ A+ L+L+ E+ +KPI+
Sbjct: 6 MLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPIH 65
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A+YD M ++K P+ TLC+G A + LL AG G+R
Sbjct: 66 LYINSPG--------GVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRM 117
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
A+P++++ + QP+G + GQA+D+ I +EM K + +LYA+H G++ +++E D+ R +
Sbjct: 118 AMPNASLHVHQPLGGVRGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDR 177
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + EA E+G+IDKVL
Sbjct: 178 FMTAKEAREWGLIDKVL 194
>gi|119713091|gb|ABL97160.1| ATP-dependent Clp protease proteolytic subunit [uncultured marine
bacterium EB0_49D07]
Length = 204
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ L++A+ L+L+ E+ EK I +YINS G G
Sbjct: 24 DIYSRLLKERIIFLTGPIDDYISNLVVAQLLFLESENPEKDISIYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++ P + TLC+G A +LLL GA+G R AL +S IMI QP+G
Sbjct: 76 ITSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAEGKRFALTNSRIMIHQPLGGFS 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D EI KEM VK ++ ++ +KH GKT +++E D R + + +EAV YGIID++L
Sbjct: 136 GQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLNATEAVTYGIIDEIL 195
Query: 275 YTEKSPEDHG 284
EK PE +G
Sbjct: 196 --EKRPETNG 203
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85.1|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG V LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K P+ T+CVG A A+LL AG KG R +L S IMI QP+G +
Sbjct: 70 VTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMIHQPLGGFQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
GQATD+ I KE+ +K EL + A G++ E+IEAD R + S +EA EYG+ID
Sbjct: 130 GQATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEEYGLID 186
>gi|410633403|ref|ZP_11344049.1| ATP-dependent Clp protease, protease subunit [Glaciecola arctica
BSs20135]
gi|410147118|dbj|GAC20916.1| ATP-dependent Clp protease, protease subunit [Glaciecola arctica
BSs20135]
Length = 213
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 115/203 (56%), Gaps = 8/203 (3%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P P +V TA + D+ S L K I++L + LI+A+ L+L+ E+
Sbjct: 5 PFDPTNALVPMVVEQTAKGERSYDIYSRLLKENIIFLVGQVEDHMANLIVAQMLFLEAEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL AG
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPNVSTICIGQAASMGAFLLSAG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R LP+S +MI QP+G +GQA+D EI KE+ ++K ++ +L A+H GK E +
Sbjct: 117 EKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAQHTGKDYETVAK 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S EA+EYG+IDKV
Sbjct: 177 DTDRDNFLSADEAMEYGLIDKVF 199
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG SV +I+A+ L+L+ ED EK IYLYINS G G
Sbjct: 23 DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDIYLYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M YVKP + T+CVG A A LL AGAK R A P+S IMI QP+G +
Sbjct: 75 ITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEIMIHQPMGGAQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATDVEI + + V+ L ++ A+ G++ E+I D R + EA EYGIID+V+
Sbjct: 135 GQATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEAKEYGIIDEVI 194
>gi|332532271|ref|ZP_08408152.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038369|gb|EGI74814.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
Length = 205
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 122/210 (58%), Gaps = 21/210 (10%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ I D R + S S+AV+YG++D V
Sbjct: 170 PLDIISKDTDRDNFMSASQAVDYGLVDSVF 199
>gi|206602656|gb|EDZ39137.1| Peptidase S14, ClpP [Leptospirillum sp. Group II '5-way CG']
Length = 203
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 9/203 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP+ T + D+ S L K+RI++LG + V L++A+ L+L+ ED K I
Sbjct: 1 MLIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDIN 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+KP + T+CVG A A+LL AGA G R
Sbjct: 61 LYINSPG--------GVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALP++ IMI QP+G ++GQAT++EI +E+ ++ L + AKH ++ ++ D R
Sbjct: 113 ALPNARIMIHQPLGGVQGQATEIEIHAREILKMREHLNGILAKHTKQSLAKVAQDTDRDY 172
Query: 258 YFSPSEAVEYGIIDKVLYTEKSP 280
+ S +A YG++D V+ + + P
Sbjct: 173 FLSAEDAKAYGLVDSVISSHRGP 195
>gi|307718289|ref|YP_003873821.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
gi|306532014|gb|ADN01548.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
Length = 206
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 8/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++ +L++A+ L+L+ +D EK I +YIN+ G G
Sbjct: 24 DIYSRLLKDRIVFIDGEINDLTADLVVAQLLFLESQDPEKDISVYINTPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A ALLL AG G R ALPSS I+I QP G ++
Sbjct: 76 VTAGLAIYDTMQYVKPDVQTICLGQAASMGALLLTAGTPGKRLALPSSRILIHQPWGGVQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +EM +K L+ +A+H G+ E++ D+ R Y +P EA YG+ID +L
Sbjct: 136 GQATDISIQAREMVRIKKLLIHYFARHTGRPEEEVAQDLERDYYMTPEEAKAYGLIDDIL 195
Query: 275 YTEKSPEDH 283
K H
Sbjct: 196 IRSKHESRH 204
>gi|389879842|ref|YP_006382072.1| ATP-dependent Clp protease proteolytic subunit [Tistrella mobilis
KA081020-065]
gi|388531232|gb|AFK56427.1| ATP-dependent Clp protease proteolytic subunit [Tistrella mobilis
KA081020-065]
Length = 198
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L V ++ A+ L+L+ ED +PI LYINS G G
Sbjct: 23 DIYSRLLKERIIFLNGQVDDDVAAVVCAQLLFLEAEDPGRPINLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I++ QP G +
Sbjct: 75 VTSGFAMYDTMRYIRSPVHTLCMGTARSMGSFLLMAGTAGERAALPNASILVHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E VK +++LYA+H +TPE++E + R ++ + EA+++G+ID++L
Sbjct: 135 GQASDILIHAEETLRVKQRMIRLYAEHCHRTPEEVERTLDRDRFMTAEEALDWGLIDRIL 194
>gi|296085707|emb|CBI29506.3| unnamed protein product [Vitis vinifera]
Length = 159
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/135 (71%), Positives = 107/135 (79%), Gaps = 9/135 (6%)
Query: 152 LGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQ--- 208
L + AI YVK PIFTLC+GNAWGEAALLL AGAKGNR+ALPSSTI+IKQ
Sbjct: 21 LLFPISELAIIFCSRYVKSPIFTLCIGNAWGEAALLLAAGAKGNRSALPSSTIVIKQSCP 80
Query: 209 -----PIGRIEGQATDVE-IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPS 262
PI R +GQATD++ +ARKE+KNVKAELVKLYAK GK+PEQIEADIRRPKYFSPS
Sbjct: 81 PINLHPIARFQGQATDIDHLARKEVKNVKAELVKLYAKPMGKSPEQIEADIRRPKYFSPS 140
Query: 263 EAVEYGIIDKVLYTE 277
AVEYGIIDKVLY E
Sbjct: 141 GAVEYGIIDKVLYNE 155
>gi|157273309|gb|ABV27208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum]
Length = 199
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + +I MVI T + D+ S L K+ I+++ +V L++A+ L+L+ ED
Sbjct: 4 PTAALIPMVI---EQTGRGERAYDIYSRLLKDNIIFISTPIDDTVASLVVAQLLFLESED 60
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
E+ I +YINS G G T AIYD M +VKP I T CVG ALLL AG
Sbjct: 61 PERDISIYINSPG--------GSVTAGMAIYDTMQFVKPDIVTFCVGQCASMGALLLAAG 112
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
KG R ALP S I+I QP G +GQATD+ I +E+K ++ + AKH GK E IEA
Sbjct: 113 TKGKRYALPHSRILIHQPSGGAQGQATDILIQAEEIKRIRELTSTILAKHTGKPFEVIEA 172
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D+ R + S ++A+EYGI+D+VL
Sbjct: 173 DVERDRIMSATQAMEYGIVDQVL 195
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V++ ++A+ L+L+ ED EK I +YINS G G
Sbjct: 41 DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M + P + T+C G A A LL GAKG R ALP+S IMI QP+G +
Sbjct: 93 VTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ E+I D R + SPSEAVEYG+IDKV+
Sbjct: 153 GQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M V+P + T+C+G A A LL AG KG R +LP+S IMI QP+G +
Sbjct: 69 VSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L + A H G+ ++IE D R + S +EA++YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKGKLNQHLADHTGQPLDKIEVDTDRDFFMSAAEAMDYGLIDQVI 188
Query: 275 YTEKSP 280
+KSP
Sbjct: 189 --DKSP 192
>gi|442611657|ref|ZP_21026363.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747585|emb|CCQ12425.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 205
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TA + D+ S L K R++++ + LI+A+ L+L+ E
Sbjct: 8 PLNALVPMVV---EQTAKGERSYDIYSRLLKERVIFMTGQVEDHMANLIVAQLLFLESES 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T +IYD M ++KP + T+C+G A A LL G
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMSIYDTMNFIKPDVSTVCIGQAASMGAFLLSGG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D EI KE+ ++KA+L +L A+H G+ E IE
Sbjct: 117 AKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKAKLNRLLAEHSGQPLEVIER 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + + +AV+YGI+D VL
Sbjct: 177 DTDRDNFMNAQQAVDYGIVDSVL 199
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G ++ L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A AA+LL AGAKG R ALP + +MI QP G +
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARVMIHQPHGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ + A+H G+ E+++ D+ R + S EA EYG+ID VL
Sbjct: 131 GQATDIEIHAREILRLREIGADILARHSGQPVEKVQRDLERDFFMSGQEAKEYGLIDSVL 190
Query: 275 YTEKSPE 281
+ PE
Sbjct: 191 ARGERPE 197
>gi|319955770|ref|YP_004167033.1| ATP-dependent clp protease proteolytic subunit clpp [Nitratifractor
salsuginis DSM 16511]
gi|319418174|gb|ADV45284.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitratifractor
salsuginis DSM 16511]
Length = 196
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L +V I+A+ L+L+ +D +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDAVASSIVAQLLFLEAQDPDKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T F+IYD M Y+KP + T+C+G A A LL GA+G R ALPSS IMI QP+G +
Sbjct: 71 ITSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLACGAEGKRYALPSSRIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I KE+ +K L K+ A+ GK+ ++IE D R + S EA EYG+IDKVL
Sbjct: 131 GQATDIAIQAKEILRMKTYLNKILAEKTGKSVKKIEKDTERDYFMSAEEAQEYGLIDKVL 190
>gi|115452971|ref|NP_001050086.1| Os03g0344900 [Oryza sativa Japonica Group]
gi|113548557|dbj|BAF12000.1| Os03g0344900 [Oryza sativa Japonica Group]
Length = 349
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 23/213 (10%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTK-GGEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++A+ +YL++ + ++P+Y+YINSTGT + GE +G E+E FAIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 163 DVMGYVKPP---IFTLCVGNAWGEAALLLGAGAKGNRAALPSST-----IMIKQPIGRIE 214
D M +K I TLC+G A G A L+L AG KG R P + MI+QP RI
Sbjct: 199 DAMMRMKTEKIRIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKDSIMPAMIQQP--RIP 256
Query: 215 G----QATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGII 270
QA+DV I KE+ + + LV+L A+H G PE+I+ +R P Y +A E+G+I
Sbjct: 257 SYGMMQASDVVIRAKEVVHNRNTLVRLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVI 316
Query: 271 DKVLY--TEK------SPEDHGVVSDLKKAQLI 295
DK+L+ EK SPE+ V+ +++ ++
Sbjct: 317 DKILWRGQEKYMADMLSPEEWDKVAGVRRPDIM 349
>gi|375111157|ref|ZP_09757368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|393762608|ref|ZP_10351235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|397169840|ref|ZP_10493267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
gi|374568699|gb|EHR39871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
jeotgali KCTC 22429]
gi|392606843|gb|EIW89727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
agri BL06]
gi|396088368|gb|EJI85951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alishewanella
aestuarii B11]
Length = 201
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
+ ++ ++P TA + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 2 NEIVNALVPIVIEQTAKGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLESENP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
EK IY+YINS G G T +IYD M Y+KP I T+CVG A A LL G
Sbjct: 62 EKDIYIYINSPG--------GSVTAGLSIYDTMRYIKPDIATVCVGQAASMGAFLLSGGT 113
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG R LP++ +MI QP+G +GQATD EI +E+ ++K +L +L A+H GK+ EQ+ D
Sbjct: 114 KGKRYCLPNARVMIHQPLGGFQGQATDFEIHAREILSIKEKLNRLMAEHSGKSYEQVCKD 173
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +A++YG+ID +L
Sbjct: 174 TERDNFLSAQQALDYGLIDAIL 195
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 113/182 (62%), Gaps = 9/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L ++ LI+A+ L+L+ E+ EK IYLYINS G G
Sbjct: 454 DIYSRLLKERVIFLNGQVEDNMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 505
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP++ +MI QP+G +
Sbjct: 506 ITSGMSIYDTMQFIKPDVSTICLGQACSMGAFLLTAGAKGKRFCLPNARVMIHQPLGGYQ 565
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID-KV 273
GQATD++I +EM VK + +L A H GK+ + IE D R + S EA++YG+ID K+
Sbjct: 566 GQATDIQIHAEEMLKVKRRMNELMAHHTGKSIKTIEKDTDRDNFMSAKEAMDYGLIDGKM 625
Query: 274 LY 275
LY
Sbjct: 626 LY 627
>gi|334129245|ref|ZP_08503050.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
gi|333445471|gb|EGK73412.1| ATP-dependent Clp protease proteolytic subunit [Methyloversatilis
universalis FAM5]
Length = 206
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + R+V+L + LI+A+ L+L+ E+ +K I+ YINS G G
Sbjct: 26 DIYSRLLRERVVFLVGPVNDATANLIVAQLLFLESENPDKDIFFYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AGAKG RA LP+S +MI QP+G +
Sbjct: 78 VTAGLSIYDTMQFIKPDVSTLCIGQAASMGAFLLSAGAKGKRACLPNSRVMIHQPMGGFQ 137
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ ++A+L + + H G+ E IE D R + S +A EYGIIDKVL
Sbjct: 138 GQASDIEIHAREILTLRAKLNTIMSHHTGQPIETIERDTDRDNFLSAEQAREYGIIDKVL 197
Query: 275 YT 276
T
Sbjct: 198 TT 199
>gi|302817596|ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
gi|300141641|gb|EFJ08350.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
Length = 253
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI T A + D+ S L K RIV + L++A+ LYL+ E+ KP
Sbjct: 29 LIPMVIEHT---ARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLKP 85
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y++ P+ TLCVG A +LLL AG G
Sbjct: 86 IHLYINSPG--------GVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQ 137
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R +LP++ +M+ QP G GQA+D+ I +E+ ++++ L KLYAKH G + E+I+ + R
Sbjct: 138 RRSLPNARVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMER 197
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ SP EA E+G+ID+V+
Sbjct: 198 DHFMSPEEAKEFGLIDEVI 216
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPG--------GL 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++P + T+C+G A AA LL AGAKG R ALP + IM+ QP+G +
Sbjct: 73 VTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIMLHQPLGGFQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT+VEI +E+ ++ L +L +KH G+ E+I D R + + +A +YG+ID+V+
Sbjct: 133 GQATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKDYGLIDEVI 192
Query: 275 YTEKSP 280
K P
Sbjct: 193 TMRKKP 198
>gi|373496129|ref|ZP_09586677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
gi|404368998|ref|ZP_10974344.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|371966040|gb|EHO83532.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
12_1B]
Length = 191
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +YINS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG-- 67
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+KP + T+C+G A ALLLGAGAKG R AL S IMI
Sbjct: 68 ------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGAKGKRYALEHSRIMI 121
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G GQATD+EI KE+ +K L ++ A GK+ +I D R Y S EA
Sbjct: 122 HQPLGGARGQATDIEIQAKEILRMKEMLSQIMADCTGKSLSEILNDTERDNYMSAEEAKN 181
Query: 267 YGIIDKVL 274
YG+ID+V
Sbjct: 182 YGLIDQVF 189
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 117/206 (56%), Gaps = 12/206 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P +SG W D+ + LY+ RI++LG + I+ LYL ED K
Sbjct: 6 PKVAYRVPGSSGGEW----VDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDSTK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
PIYLYINS G G AI+D M +K + T+ +G A A+ +L AG+KG
Sbjct: 62 PIYLYINSPG--------GSVISGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKG 113
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALPSS IMI QP+G +GQA D+++ ++ ++ LVK+Y+ G+T EQI D+
Sbjct: 114 KRLALPSSRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFTGQTTEQITKDLD 173
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKSP 280
R + S EA+EYG+ID+VL +P
Sbjct: 174 RDNFMSAQEALEYGLIDRVLERPNTP 199
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + +EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEVM 190
Query: 275 YTEK 278
EK
Sbjct: 191 EPEK 194
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A + LL AG KG R ALP+S IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + + +L ++ A+ G+ E IE D R Y S +A+EYGIIDK++
Sbjct: 131 GQATEIEIAARHILKTREKLNRILAERTGQPIEVIEKDTDRDNYMSAEQALEYGIIDKIM 190
>gi|60389653|sp|Q6LNW0.2|CLPP_PHOPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 199
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 117/202 (57%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+ ++P T+ + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 2 SPITDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL GA
Sbjct: 62 DKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 113
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG R LP+S +MI QP+G +GQA+D++I KE+ +K L L AKH G+ E +E D
Sbjct: 114 KGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGD 173
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYG++D VL
Sbjct: 174 TDRDNFMSADQAVEYGLVDSVL 195
>gi|94676878|ref|YP_588715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|116243128|sp|Q1LTJ9.1|CLPP_BAUCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94220028|gb|ABF14187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 205
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++ + +I+A+ ++L+ E+ EK IYLYINS G G
Sbjct: 30 DIFSRLLKERIIFMTGKVEDYMANIIVAQMIFLEAENPEKDIYLYINSPG--------GN 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T C+G A A LL AG KG R LP++ +MI QP+G +
Sbjct: 82 ITSGMSIYDTMQFIKPNVSTFCMGQAASMGAFLLAAGTKGKRFCLPNARMMIHQPMGGFQ 141
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ VK + +L AKH GKT + IE D R ++ S +EAV+YG++D +L
Sbjct: 142 GQATDIQIHAKEILKVKNRMNELMAKHIGKTLQVIEQDTERDRFLSANEAVDYGLVDAIL 201
>gi|332372582|gb|AEE61433.1| unknown [Dendroctonus ponderosae]
Length = 244
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L +++ LI+A+ L+LQ E+ KPI++YINS G G
Sbjct: 45 DIYSRLLKERIICLMGPIHDTMSSLIVAQLLFLQAENTNKPIHMYINSPG--------GS 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y PPI T CVG A A+LLL +G+ G R +LP++ IMI QP G +
Sbjct: 97 VTAGLGIYDTMQYCAPPIATWCVGQACSMASLLLASGSPGMRHSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K ++ +LY +H G E IE ++ R K+ SP EA E+G+ID VL
Sbjct: 157 GQATDIQIQAEEIIKLKNQINQLYVRHTGLELETIEKNMERDKFMSPVEAKEFGLIDTVL 216
>gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 214
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V++ ++A+ L+L+ ED EK I +YINS G G
Sbjct: 41 DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M + P + T+C G A A LL GAKG R ALP+S IMI QP+G +
Sbjct: 93 VTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ E+I D R + SPSEAVEYG+IDKV+
Sbjct: 153 GQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + +EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAKEYGLIDEVM 190
Query: 275 YTEK 278
EK
Sbjct: 191 EPEK 194
>gi|194476565|ref|YP_002048744.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191572|gb|ACB42534.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 219
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 14/197 (7%)
Query: 91 QPPPDLASYLYKNRIVYLGMSFVP------------SVTELILAEFLYLQYEDVEKPIYL 138
+ DLAS L RI+YLGM+ +VT+L++A+ L L++E I +
Sbjct: 21 ESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFES-NSAITI 79
Query: 139 YINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
YINSTG+T +G+ETEAFAIYD + +++ P+ T CVG A G A +LL GA G RA
Sbjct: 80 YINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASGCRA 139
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+LP+++I++ QP + G +TD+ I +++ ++ + ++ + H GK+ +QI +D R
Sbjct: 140 SLPNASIILNQPYNYVGGSSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDCNRIH 199
Query: 258 YFSPSEAVEYGIIDKVL 274
+ + +A+ YGIID V+
Sbjct: 200 HLTAYQALHYGIIDDVI 216
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0.1|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QPIG +
Sbjct: 72 VTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPIGGVR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + +K + ++ A+ G+ E IE D R + + EA++YGIIDKV+
Sbjct: 132 GQATDIKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEEALKYGIIDKVI 191
Query: 275 YTEKSP 280
E+ P
Sbjct: 192 --ERRP 195
>gi|335037269|ref|ZP_08530578.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
gi|333791293|gb|EGL62681.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
ATCC 31749]
Length = 202
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 116/180 (64%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E++ K + +LYA+H G++ E+ E + R ++ + EA+E+G+ID++L
Sbjct: 135 GQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFETAMDRDRFMTVQEALEWGLIDRIL 194
>gi|323495056|ref|ZP_08100145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
gi|323310713|gb|EGA63888.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
Length = 208
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K RI++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDSVL 203
>gi|195384926|ref|XP_002051163.1| GJ13731 [Drosophila virilis]
gi|194147620|gb|EDW63318.1| GJ13731 [Drosophila virilis]
Length = 254
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 115/197 (58%), Gaps = 13/197 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH +++ A + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNNYDEMCARMERDHFMTPEEAKTLGIIDHVL 216
Query: 275 YTEKSPE---DHGVVSD 288
E PE D+G SD
Sbjct: 217 --EHPPETVADNGPTSD 231
>gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
Length = 214
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V++ ++A+ L+L+ ED EK I +YINS G G
Sbjct: 41 DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M + P + T+C G A A LL GAKG R ALP+S IMI QP+G +
Sbjct: 93 VTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ E+I D R + SPSEAVEYG+IDKV+
Sbjct: 153 GQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 212
>gi|406927441|gb|EKD63473.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 205
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 121/203 (59%), Gaps = 17/203 (8%)
Query: 81 IPFTSG---------TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
IP TS TA + D+ S L K+RI++LG + +V LI+A+ L+L+ E+
Sbjct: 8 IPLTSSILVPTVLEKTAQGERSYDIYSRLLKDRIIFLGTAIDGNVANLIIAQLLFLENEN 67
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K I +YINS G G+ T AIYD M ++K + T+CVG A A+LL G
Sbjct: 68 PKKDITMYINSPG--------GHVTAGLAIYDTMQHLKCDVSTVCVGMAASMGAVLLCGG 119
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R +LP++ +MI QP+G +EGQAT++EI + + KA+L + AKH GK +E
Sbjct: 120 AKGKRFSLPNAEVMIHQPLGGVEGQATEIEIHARHILKTKAKLNGIIAKHSGKKVADVEK 179
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S +A++YG+IDK++
Sbjct: 180 DTDRDNFMSAEDALKYGLIDKIV 202
>gi|15888940|ref|NP_354621.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
gi|21759065|sp|Q8UEX6.1|CLPP1_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15156717|gb|AAK87406.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
fabrum str. C58]
Length = 202
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 116/180 (64%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E++ K + +LYA+H G++ E+ E + R ++ + EA+E+G+ID++L
Sbjct: 135 GQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFETAMDRDRFMTVQEALEWGLIDRIL 194
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A ++LL AGAKG R ALP + IMI QP+G +
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ ++ A H G+ E+I D R + S EA EYG+ID+V+
Sbjct: 132 GQSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEYGLIDEVV 191
>gi|357629245|gb|EHJ78139.1| hypothetical protein KGM_01435 [Danaus plexippus]
Length = 211
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI+ L ++ L++A+ L+LQ E +KP++LYINS G G
Sbjct: 17 DIYSRLLRERIICLMGPINDEISSLVVAQLLFLQSESSKKPVHLYINSPG--------GN 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y+ PP+ T CVG A A+LLL AGA G R ALP+S IMI QP G +
Sbjct: 69 VTAGLGIYDTMQYITPPVATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSGGVR 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K+++ LY +H G E+I+ + R + SP EA +G+ID VL
Sbjct: 129 GQATDIQIQAEEILKLKSQINNLYVRHTGLPIERIQTSMERDCFMSPIEAKSFGLIDNVL 188
Query: 275 YTEKSPEDHGVVSD 288
+ P H V D
Sbjct: 189 ---EHPPSHVVEGD 199
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + +K + K+ ++ G+ E IE D R + + EA++YGIIDKV+
Sbjct: 132 GQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDKVI 191
Query: 275 YTEKSP 280
E+ P
Sbjct: 192 --ERRP 195
>gi|110834071|ref|YP_692930.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
borkumensis SK2]
gi|110647182|emb|CAL16658.1| ATP-dependent Clp protease, proteolytic subunitClpP [Alcanivorax
borkumensis SK2]
Length = 218
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R++++ + LI+A+ L+L+ E+ +K I+LYINS G
Sbjct: 34 TARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPG-- 91
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +IYD M ++KP + T+C+G A A LL AGA G R ALP++ +MI
Sbjct: 92 ------GSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNARVMI 145
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQA+D+EI KE+ +K +L L A H G+ EQ+E D R + S EA E
Sbjct: 146 HQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKE 205
Query: 267 YGIIDKVL 274
YGIID VL
Sbjct: 206 YGIIDAVL 213
>gi|385784973|ref|YP_005761146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis N920143]
gi|339895229|emb|CCB54551.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus lugdunensis N920143]
Length = 195
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 12/188 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDFEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G++ EQI+ D R + + EA YG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLIDEVM 190
Query: 275 YTEKSPED 282
PED
Sbjct: 191 ----EPED 194
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI QP+G +
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ + A+H G+ PE+I D R + S EA EYG+ID+V+
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEYGLIDEVV 191
Query: 275 YTEKS 279
K+
Sbjct: 192 TRPKA 196
>gi|443730787|gb|ELU16145.1| hypothetical protein CAPTEDRAFT_163852 [Capitella teleta]
Length = 233
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 111/186 (59%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L V+ L++A+ L+LQ E +KPI++YINS G G
Sbjct: 51 DIYSRLLKERIICLMGPINDHVSSLVVAQLLFLQSESSKKPIHMYINSPG--------GV 102
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PPI T CVG A A+LLL AGA G R +LP+S IMI QP G +
Sbjct: 103 VTAGLGIYDTMQYVLPPIATWCVGQASSMASLLLCAGAPGMRHSLPNSRIMIHQPHGGAQ 162
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ +K ++ LY KH ++ E IE ++ R + S EA E+G+ID+VL
Sbjct: 163 GQATDIQIQAKEILTLKTKINNLYVKHSLQSLETIEKNMERDHFLSAEEAKEFGLIDQVL 222
Query: 275 YTEKSP 280
P
Sbjct: 223 VHPPQP 228
>gi|78485521|ref|YP_391446.1| ATP-dependent Clp protease proteolytic subunit [Thiomicrospira
crunogena XCL-2]
gi|110816468|sp|Q31GF1.1|CLPP_THICR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78363807|gb|ABB41772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
+P+ ++P T+ + D+ S L K R+++L + LI+A+ L+L+ E+
Sbjct: 4 TPIQDALVPMVIEQTSRGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENP 63
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T AIYD M ++KP + T+C+G A + LL AGA
Sbjct: 64 DKDIHLYINSPG--------GSVTAGMAIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGA 115
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
+G R ALP+S +MI QP+G +GQA+D+EI KE+ +K +L K A H G+ E IE D
Sbjct: 116 EGKRYALPNSRVMIHQPLGGFQGQASDIEIHAKEIIQIKQKLNKALADHTGQPIEVIEND 175
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S EA +YG++DKVL
Sbjct: 176 TDRDNFMSADEACDYGLVDKVL 197
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVI 188
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M +++P + T+C+G A A LL G KG R ALP + IMI QP+G +
Sbjct: 69 VYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G ATD+EI KE+ +K L L A H G+ E+IE D R + +P +A EYG+ID+V+
Sbjct: 129 GPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
Query: 275 YTEKSP 280
P
Sbjct: 189 SKRPQP 194
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|418415755|ref|ZP_12988958.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418636869|ref|ZP_13199207.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|374840430|gb|EHS03924.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus lugdunensis VCU139]
gi|410873613|gb|EKS21547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 195
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 116/188 (61%), Gaps = 12/188 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G++ EQI+ D R + + EA YG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEAKAYGLIDEVM 190
Query: 275 YTEKSPED 282
PED
Sbjct: 191 ----EPED 194
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIY M ++KP + TLC G A A LL GAKG R ALP++ +MI QP+G
Sbjct: 71 VTAGLAIYATMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGAR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K L + A+H G+ E++ AD R + S EA+EYG+IDKVL
Sbjct: 131 GQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R ALP++ IMI QP+G +
Sbjct: 72 ITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFALPNARIMIHQPLGGFQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI E+ +K L ++ +K+ G+ E+IE D R + S EA EYG+ID +
Sbjct: 132 GQAKDIEIHANEILRMKKMLNEILSKNTGQPIEKIEMDSDRDFFMSAMEAKEYGLIDDCI 191
>gi|116243127|sp|Q0VQ90.2|CLPP_ALCBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 205
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R++++ + LI+A+ L+L+ E+ +K I+LYINS G
Sbjct: 21 TARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPG-- 78
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T +IYD M ++KP + T+C+G A A LL AGA G R ALP++ +MI
Sbjct: 79 ------GSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNARVMI 132
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQA+D+EI KE+ +K +L L A H G+ EQ+E D R + S EA E
Sbjct: 133 HQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKE 192
Query: 267 YGIIDKVL 274
YGIID VL
Sbjct: 193 YGIIDAVL 200
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ L++A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ ++D M V+P + T+C+G A A LL AGAKG R +LP+S IMI QP+G +
Sbjct: 69 VSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L + A H G+ IE D R + S EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKNKLNQHLADHTGQPLSTIEEDTERDFFMSSEEAKEYGLIDQVI 188
>gi|46579746|ref|YP_010554.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602778|ref|YP_967178.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris DP4]
gi|387153092|ref|YP_005702028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
gi|60389677|sp|Q72CE8.1|CLPP_DESVH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201819|sp|A1VE85.1|CLPP_DESVV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|46449161|gb|AAS95813.1| ATP-dependent Clp protease, proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563007|gb|ABM28751.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfovibrio
vulgaris DP4]
gi|311233536|gb|ADP86390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
Length = 201
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 108/188 (57%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV LG V LI A+ L+L+ E+ EK I++YINS G G
Sbjct: 18 DIYSRLLKDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ P+ TLC+G A ALLL AGA G R +LP S IMI QP G +
Sbjct: 70 VTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPGLRFSLPHSRIMIHQPSGGFQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K L + ++H GK EQ+ D R + P EA YG+ID+VL
Sbjct: 130 GQATDIDIQAREVLRLKQSLNAIMSQHTGKPLEQVALDTERDYFMGPEEAQAYGLIDRVL 189
Query: 275 YTEKSPED 282
+ D
Sbjct: 190 TSRSEATD 197
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 10/217 (4%)
Query: 69 KSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYL 127
+S + + ++P+ T + D+ S L + RIV+LG + + LI+A+ L+L
Sbjct: 10 ESIKKHEIFNQLVPYVIEQTGRGERGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFL 69
Query: 128 QYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
+ ED +K IYLYINS G G + AIYD M Y++ + T+CVG A A+L
Sbjct: 70 EAEDPDKDIYLYINSPG--------GSVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVL 121
Query: 188 LGAGAKGNRAALPSSTIMIKQP-IGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
L G G R+ALP S IMI QP +G ++GQ TD+EI KEM + + K+ A+H GK+
Sbjct: 122 LAGGEAGKRSALPHSKIMIHQPWVGGLQGQTTDIEIHAKEMIKTRDTIYKILAEHTGKSY 181
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDH 283
EQI D R + + EA EY +ID +L +P D+
Sbjct: 182 EQIAKDCDRDYFMTAEEAKEYNLIDNILTHRVNPSDN 218
>gi|375306341|ref|ZP_09771639.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
gi|375081594|gb|EHS59804.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus sp.
Aloe-11]
Length = 198
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A G+ E+IE D R + S +A EYGIIDKVL
Sbjct: 131 GQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
>gi|261346364|ref|ZP_05974008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
gi|282565678|gb|EFB71213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
Length = 206
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 12/203 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS + D+ S L K RI++L + LI+A+ L+L+ E+ EK
Sbjct: 16 LVPMVIEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T +IYD M ++KP + T+C+G A A LL AG KG
Sbjct: 73 IHLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGK 124
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R LP+S +MI QP+G +GQATD+EI +E+ VK+ + +L A H GK+ E+I D R
Sbjct: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAHHTGKSIEEISRDTER 184
Query: 256 PKYFSPSEAVEYGIIDKVLYTEK 278
++ S +EA EYG++D + YT +
Sbjct: 185 DRFLSANEAKEYGLVDHI-YTSR 206
>gi|20129427|ref|NP_609388.1| CG5045, isoform A [Drosophila melanogaster]
gi|442627236|ref|NP_001260332.1| CG5045, isoform B [Drosophila melanogaster]
gi|7297671|gb|AAF52923.1| CG5045, isoform A [Drosophila melanogaster]
gi|21428864|gb|AAM50151.1| GH10833p [Drosophila melanogaster]
gi|220944040|gb|ACL84563.1| CG5045-PA [synthetic construct]
gi|220954028|gb|ACL89557.1| CG5045-PA [synthetic construct]
gi|223966793|emb|CAR93133.1| CG5045-PA [Drosophila melanogaster]
gi|440213650|gb|AGB92867.1| CG5045, isoform B [Drosophila melanogaster]
Length = 253
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|417852109|ref|ZP_12497751.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|338217778|gb|EGP03617.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
Length = 193
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 113/196 (57%), Gaps = 9/196 (4%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +
Sbjct: 3 VIPMVVEQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINI 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M +VKP I TLCVG A A LL G G R A
Sbjct: 63 YINSPG--------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIA 114
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LPS+ +MI QP+G GQA+D++I +E+ +K L + A H G+T E+IE+D R +
Sbjct: 115 LPSARVMIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQTIERIESDTDRDNF 174
Query: 259 FSPSEAVEYGIIDKVL 274
S EA YG++D+VL
Sbjct: 175 MSAEEAKAYGLVDEVL 190
>gi|386346350|ref|YP_006044599.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6578]
gi|339411317|gb|AEJ60882.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6578]
Length = 206
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 8/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++ +L++A+ L+L+ +D EK I +YIN+ G G
Sbjct: 24 DIYSRLLKDRIVFIDGEINDLTADLVVAQLLFLESQDPEKDISVYINTPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A ALLL AG G R ALPSS I+I QP G ++
Sbjct: 76 VTAGLAIYDTMQYVKPDVQTICLGQAASMGALLLTAGTPGKRLALPSSRILIHQPWGGVQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +EM +K L+ +A H G+ E++ D+ R Y +P EA YG+ID +L
Sbjct: 136 GQATDISIQAREMVRIKKLLIHYFAHHTGRPEEEVAQDLERDYYMTPEEAKAYGLIDDIL 195
Query: 275 YTEKSPEDH 283
K H
Sbjct: 196 IRSKHESRH 204
>gi|333892289|ref|YP_004466164.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
gi|332992307|gb|AEF02362.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas sp.
SN2]
Length = 209
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TS + D+ S L K +++L + LI+A+ L+L+ E+
Sbjct: 8 PMNALVPMVVEQTSKG---ERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+CVG A A LL G
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTVCVGQAASMGAFLLSGG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ E++
Sbjct: 117 AKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLMAQHTGQDYEKVAH 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S +EA EYG+ID+V+
Sbjct: 177 DTDRDNFLSATEAKEYGLIDQVM 199
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L RIV+LG V+ +++A+ L+L+ +D EK I LYINS G G
Sbjct: 24 DIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEKDINLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP I T+C+G A A+LL G KG R ALP+S +MI QP G E
Sbjct: 76 ITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRFALPNSRVMIHQPFGGAE 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A D+EI +E+ ++ EL K+ AKH G++ ++IE D R + S +EAVEYG+IDKV+
Sbjct: 136 GVAKDIEIRAREILYLRDELNKILAKHTGQSIKKIEKDADRDFFMSSTEAVEYGMIDKVI 195
>gi|359434423|ref|ZP_09224688.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
gi|357918931|dbj|GAA60937.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20652]
Length = 205
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 21/210 (10%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI +E+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAREILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ I D R + S S+AV+YG++D V
Sbjct: 170 PLDIISKDTDRDNFMSASQAVDYGLVDSVF 199
>gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
CMCP6]
gi|37679288|ref|NP_933897.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
YJ016]
gi|320156969|ref|YP_004189348.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
gi|27359628|gb|AAO08567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
vulnificus CMCP6]
gi|37198031|dbj|BAC93868.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio vulnificus
YJ016]
gi|319932281|gb|ADV87145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
Length = 208
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKTKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG LI+A+ L+L+ ED EK IYLY+NS G G
Sbjct: 17 DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYLYVNSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+CVG A + LL AG KG R +LP++ IMI QP+G +
Sbjct: 69 VTAGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L AK+ G++ E+I AD R + SP +A+EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKGLLNGALAKNTGQSLEKITADTERDFFLSPHQAMEYGLIDQVI 188
>gi|359440399|ref|ZP_09230319.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
gi|392534093|ref|ZP_10281230.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
arctica A 37-1-2]
gi|358037712|dbj|GAA66568.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20429]
Length = 205
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 21/210 (10%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ I D R + S ++AV+YG++D V
Sbjct: 170 PLDIISKDTDRDNFMSATQAVDYGLVDSVF 199
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESEDTDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL +GAKG R ALP+S IMI QP+G
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNSEIMIHQPLGGFR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I K + +K +L K+ +++ GK QIE D+ R + EA EYG+ID V+
Sbjct: 131 GQATDIDIHAKRILRMKNDLNKILSENTGKPLSQIELDVERDYFLGSYEAKEYGLIDNVI 190
>gi|162451419|ref|YP_001613786.1| endopeptidase Clp [Sorangium cellulosum So ce56]
gi|161162001|emb|CAN93306.1| Endopeptidase Clp [Sorangium cellulosum So ce56]
Length = 214
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
++ S L K+RIV++G V ++A+FL+L+ ED EK I +YINS G G
Sbjct: 38 NIFSRLLKDRIVFIGTEIDDFVANAVIAQFLFLESEDPEKEIQVYINSPG--------GV 89
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M YV+ P+ T+C+G A A+LLGAG KG R ALP + +MI QP+G
Sbjct: 90 VTSGLAMYDTMQYVRCPVSTMCIGQAASMGAVLLGAGRKGRRFALPHARMMIHQPLGGAR 149
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+K +K L+ + GK +++ DI R Y S ++A EYG+ID+V
Sbjct: 150 GQATDIEIQAREIKKIKETLIDILVDATGKNRDELAKDIERDFYLSATQAKEYGLIDEVF 209
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|18203165|sp|Q9K888.1|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + + I+A+ L+L+ E+ +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ FAIYD M +VKP I T+C G A AA+LL AG KG R ALP+S IMI QP G +
Sbjct: 72 TSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIHQPSGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I K + ++ +LV + ++ G++PE++ D+ R + S EA+EYGI+D+++
Sbjct: 132 GQASDLAITAKRILGIREKLVTVTSERTGQSPEKVAKDMDRDYFMSAEEALEYGIVDQII 191
>gi|410726144|ref|ZP_11364388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
gi|410601390|gb|EKQ55905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. Maddingley MBC34-26]
Length = 198
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
+IP+ T+ + D+ S L K+RI++LG S+ LI+A+ ++L+ ED +K I+L
Sbjct: 3 LIPYVIEQTSRGERSYDIYSKLLKDRIIFLGEEVSDSIANLIVAQLIFLEAEDPDKDIHL 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T FAIYD M Y+K + T+CVG A A LL GA G R A
Sbjct: 63 YINSPG--------GSVTAGFAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGANGKRFA 114
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
L ++ +MI QP G +GQA+D++IA + + K L K+ A++ GK+ EQIE D R +
Sbjct: 115 LSNAEVMIHQPSGGAKGQASDIKIAAEHILKNKRNLNKILAENTGKSIEQIEVDTDRDNF 174
Query: 259 FSPSEAVEYGIIDKVLYTEK 278
S EA EYG+ID V+ E
Sbjct: 175 MSADEAKEYGLIDGVMNREN 194
>gi|340758793|ref|ZP_08695375.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI++LG +V I+A+ L+L+ ED +K I +YINS G
Sbjct: 10 TGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYINSPG-- 67
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+KP + T+C+G A ALLLGAGA+G R AL S IMI
Sbjct: 68 ------GVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGARGKRYALEHSRIMI 121
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G GQATD+EI KE+ +K L ++ A GK+ +I D R Y S EA
Sbjct: 122 HQPLGGARGQATDIEIQAKEILRMKEMLSQILADCTGKSLSEIITDTERDNYMSAEEAKN 181
Query: 267 YGIIDKVL 274
YG+ID+V
Sbjct: 182 YGLIDQVF 189
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6.1|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L L++A+ L+L+ E+ +K IY YINS G G
Sbjct: 32 DIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDKDIYFYINSPG--------GS 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 84 VTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ +++ L ++ A+H G+ E+IE D R + S +EA EYG+IDKVL
Sbjct: 144 GQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEYGLIDKVL 203
>gi|32490904|ref|NP_871158.1| hypothetical protein WGLp155 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340011|sp|Q8D346.1|CLPP_WIGBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25166110|dbj|BAC24301.1| clpP [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 194
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++ + LI+A+ ++L+ ED EK I+LYINS G G
Sbjct: 19 DIFSRLLKERIIFVTGKIEDYMANLIIAQMIFLESEDPEKDIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++K + TLC+G + AAL+L +G KG R +LP++ IMI QP+G +
Sbjct: 71 VTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIMIHQPLGGSQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I E+ +K +++L +KH G++ E I D R ++FS SEAV YG+IDKV+
Sbjct: 131 GQATDIAIHTTEILKIKKCMIELLSKHTGQSAEIISKDTERDRFFSGSEAVIYGLIDKVI 190
Query: 275 YTEK 278
K
Sbjct: 191 TCRK 194
>gi|374321531|ref|YP_005074660.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
gi|357200540|gb|AET58437.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
terrae HPL-003]
Length = 198
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG V I+A+ L+L ED EK I+LY+NS G G
Sbjct: 19 DIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYVNSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A G+ E+IE D R + S +A EYGIIDKVL
Sbjct: 131 GQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGIIDKVL 190
Query: 275 YTEKSPE 281
T S E
Sbjct: 191 -TSSSTE 196
>gi|119473285|ref|ZP_01614937.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
gi|119444508|gb|EAW25828.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
Length = 173
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 8/174 (4%)
Query: 101 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFA 160
+K RI++L ++ LILA+ L+L+ E+ +K I+LYINS G G T A
Sbjct: 2 FKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPG--------GSVTAGMA 53
Query: 161 IYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDV 220
IYD M ++KP + T+CVG A A LL AGAKG R LP+S +MI QP+G +GQA+D
Sbjct: 54 IYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDF 113
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
EI KE+ ++K +L +L A+H G+ + I D R + S SEAVEYG++D V
Sbjct: 114 EIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEAVEYGLVDSVF 167
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + +K + K+ ++ G+ E IE D R + + EA++YGIIDKV+
Sbjct: 132 GQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDKVI 191
Query: 275 YTEKSP 280
E+ P
Sbjct: 192 --ERRP 195
>gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|115311352|sp|Q317Y6.1|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 219
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V++ ++A+ L+L+ ED EK I +YINS G G
Sbjct: 46 DIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPG--------GS 97
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M + P + T+C G A A LL GAKG R ALP+S IMI QP+G +
Sbjct: 98 VTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQ 157
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ E+I D R + SPSEAVEYG+IDKV+
Sbjct: 158 GQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVI 217
>gi|198461900|ref|XP_001352265.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
gi|198142480|gb|EAL29303.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
Length = 253
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 13/197 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH + E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTSIYVKHAKNSYEEMCQRMERDHFMTPDEAKVLGIIDHVL 216
Query: 275 YTEKSPE---DHGVVSD 288
E PE D G SD
Sbjct: 217 --EHPPETVSDSGPTSD 231
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + +K L ++ ++ G+ E+I+ D R + S EA EYG+ID+V
Sbjct: 131 GQATDIEIHAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEAKEYGLIDEVF 190
>gi|117926916|ref|YP_867533.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
gi|254763794|sp|A0LDT4.1|CLPP_MAGSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117610672|gb|ABK46127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
marinus MC-1]
Length = 202
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+V+L + L++A+ L+L+ E+ EK I+LYINS G G
Sbjct: 19 DIYSRLLKERVVFLVGQVEEHMANLVVAQLLFLESENPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +++P + TLC+G A A+LL AG G R LP++ +MI QP+G
Sbjct: 71 VTAGMAIYDTMQFIRPSVSTLCIGQAASMGAVLLAAGEAGKRLVLPNARVMIHQPLGGFS 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D EI +E+ ++ L ++ + H GK EQ++ D R + S +EAVEYG++DKV+
Sbjct: 131 GQASDFEIHAREILRIRENLNQVLSHHTGKPLEQVQLDTERDNFLSATEAVEYGLVDKVI 190
Query: 275 YTEKSPE 281
+ PE
Sbjct: 191 SHRELPE 197
>gi|406882489|gb|EKD30274.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium (gcode 4)]
Length = 207
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 11/206 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K++ ++ +I VI G ++ D+ S L ++R+V+LG + SV ++A+ LYL+
Sbjct: 10 KTQIQATLIPTVIDKIGG---QERAYDIYSRLLEDRVVFLGDAIDASVANTVIAQLLYLE 66
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
+D + PI +Y+NS G G+ T AIYDVM YV+ I T+CVG A +++L
Sbjct: 67 KQDPKAPITIYVNSPG--------GHVTAGLAIYDVMQYVQCDIITVCVGLAASMGSIIL 118
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
G KG R +LP S IMI QP+G EGQATD+ IA + + L + AKH G+ ++
Sbjct: 119 AGGTKGKRYSLPHSEIMIHQPLGGTEGQATDIRIAAEHILKTGGVLYGILAKHSGQDVKK 178
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
+E D R Y +P EA++YG+IDK++
Sbjct: 179 VEKDCDRDNYMTPEEALKYGLIDKII 204
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + +V I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+C+G A A+LL GAKG R ALP++ IMI QP+G +
Sbjct: 72 ITSGLAIFDTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRFALPNTRIMIHQPLGGFQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K+++ ++ A+ K EQI+AD R + S EA YG+ID+V+
Sbjct: 132 GQAKDIEIQAKEILRLKSKINEILAERTSKPIEQIDADCDRDFFMSAEEAKAYGLIDEVI 191
>gi|452077351|gb|AGF93313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [uncultured
organism]
Length = 205
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 124/215 (57%), Gaps = 14/215 (6%)
Query: 70 SKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S+PR+ V PF T ++ D+ S L K+RIV+L ++ +I+A+ LYL+
Sbjct: 2 SEPRAQV-----PFVVDKTDGQERTYDIYSRLLKDRIVFLKGPVTDELSNIIIAQMLYLE 56
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ + I LYIN+ G G T AIYD M YVKP + T+CVG A ALLL
Sbjct: 57 AENPSQDINLYINTQG--------GVVTGGLAIYDTMQYVKPEVKTICVGQASSMGALLL 108
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
G G R ALP+S I+I QP+G +GQATDVEI E+ VK + + A H G+ ++
Sbjct: 109 ATGEPGKRYALPNSRILIHQPLGGAQGQATDVEIHANELVKVKKRVNNILADHTGQPLDK 168
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDH 283
I+ D R + +P EA +YGIID+V+ T ++ E+
Sbjct: 169 IQEDTERDFFMAPEEAEDYGIIDEVISTRENSEEE 203
>gi|403381812|ref|ZP_10923869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 117/180 (65%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G + ++ I+A+ L+LQ ED +K I++YINS G G
Sbjct: 19 DIYSRLLKDRIVFVGAAIDDALANSIVAQLLFLQAEDPDKDIHMYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ F I+D M Y+KP + T+C G A A+LLL AGAKG R ALP+S IMI QP G +
Sbjct: 71 TSAGFGIFDTMQYIKPQVNTICTGFAASFASLLLLAGAKGKRFALPNSEIMIHQPHGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I+ + + V+ ++VK+ ++ G+ E+IE D+ R + S EA+EYGIIDK++
Sbjct: 131 GQASDIAISARRILQVREKIVKITSERTGQPIEKIEKDMDRDYFMSAEEALEYGIIDKII 190
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +I A+ LYL+ ED EK I LYINS G G
Sbjct: 26 DIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDAEKEIMLYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +++ P+ T+CVG A ALLL AG+ G R +LP+S IMI QP
Sbjct: 78 VTAGMAIYDTMQHIRCPVATVCVGQAASMGALLLAAGSAGLRRSLPNSRIMIHQPSSAFR 137
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ + + ++ A H ++ EQI D R + PS+A+E+GIID+++
Sbjct: 138 GQASDIEIHAKEILHTRQRTNEILAHHTKRSIEQIAKDTERDNFLQPSKALEFGIIDEII 197
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 72 VTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGVR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + +K + K+ ++ G+ E IE D R + + EA++YGIID+V+
Sbjct: 132 GQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEALKYGIIDRVI 191
Query: 275 YTEKSP 280
E+ P
Sbjct: 192 --ERRP 195
>gi|226529349|ref|NP_001141859.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194689706|gb|ACF78937.1| unknown [Zea mays]
gi|413946719|gb|AFW79368.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 388
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ +R P+YF EA++YG+ D
Sbjct: 283 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLAD 342
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQLI 295
+L++ + S + + + L KAQ +
Sbjct: 343 TILHSLDGSFKPKDLTAQLAKAQAM 367
>gi|77360986|ref|YP_340561.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|110816463|sp|Q3IF46.1|CLPP_PSEHT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76875897|emb|CAI87118.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti)(Heat shock protein
F21.5) [Pseudoalteromonas haloplanktis TAC125]
Length = 205
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 122/215 (56%), Gaps = 21/215 (9%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ P + ++ MV+ EQ P D+ S L K RI++L ++ LILA+
Sbjct: 6 TDPLNALVPMVV--------EQTPKGERSYDIYSRLLKERIIFLTGPVEDNMANLILAQM 57
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T AIYD M ++KP + T+CVG A
Sbjct: 58 LFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMG 109
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGAKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+
Sbjct: 110 AFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQ 169
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
+ I D R + S +AV+YGI+D V S
Sbjct: 170 PLDVISKDTDRDNFMSADQAVDYGIVDSVFKNRAS 204
>gi|302804055|ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
gi|300148617|gb|EFJ15276.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
Length = 206
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI T A + D+ S L K RIV + L++A+ LYL+ E+ KP
Sbjct: 6 LIPMVIEHT---ARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLKP 62
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y++ P+ TLCVG A +LLL AG G
Sbjct: 63 IHLYINSPG--------GVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQ 114
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R +LP++ +M+ QP G GQA+D+ I +E+ ++++ L KLYAKH G + E+I+ + R
Sbjct: 115 RRSLPNARVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMER 174
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ SP EA E+G+ID+V+
Sbjct: 175 DHFMSPEEAKEFGLIDEVI 193
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M ++KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ +L ++ A+ G+ E+IE D R + + EA EYG++D+VL
Sbjct: 131 GQATDIEIRARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEAKEYGLVDQVL 190
Query: 275 YTEKSP 280
EK+P
Sbjct: 191 --EKTP 194
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL + A G+ E + D R + S +AVEYG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVL 189
Query: 275 YTE 277
E
Sbjct: 190 TRE 192
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 112/186 (60%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ LYL+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++P + T+C+G A A LL AG KG R +LP S IMI QP+G +
Sbjct: 69 VSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L A+H G+ ++I D R + SP E++EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKQQLNHYLAEHTGQPLDRIAEDTERDFFMSPQESMEYGLIDRVI 188
Query: 275 YTEKSP 280
E+ P
Sbjct: 189 --ERRP 192
>gi|310657900|ref|YP_003935621.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
Length = 194
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIYDTMQYIKPDVATICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGTQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I + + ++ +L ++ A G+ E+IE D R + S +EA EYG+ID+VL
Sbjct: 131 GQATDIKIHAERIIRMRNKLNEIMADRSGQPLEKIERDTERDFFMSSTEAKEYGLIDEVL 190
Query: 275 YTEKSP 280
EK P
Sbjct: 191 --EKRP 194
>gi|195650193|gb|ACG44564.1| endopeptidase Clp [Zea mays]
Length = 388
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ +R P+YF EA++YG+ D
Sbjct: 283 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLAD 342
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQLI 295
+L++ + S + + + L KAQ +
Sbjct: 343 TILHSLDGSFKPKDLTAQLAKAQAM 367
>gi|194366563|ref|YP_002029173.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia R551-3]
gi|194349367|gb|ACF52490.1| Endopeptidase Clp [Stenotrophomonas maltophilia R551-3]
Length = 202
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENPEKPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ A+YD M Y+ P+ TLC+G A + LL AG G+RAAL ++++ + QP+G ++
Sbjct: 75 ISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALANASLHVHQPLGGVQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G++ E++E + R ++ S +A E+G+ID+VL
Sbjct: 135 GQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEEVEQTLDRDRFMSAEQACEWGLIDQVL 194
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
++ P + ++ MVI TA + D+ S L K R+++L + LI+A+ L+
Sbjct: 4 IAENDPMNALVPMVI---EQTARGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQLLF 60
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
L+ E+ EK I+LYINS G G T AIYD M ++K + TLC+G A A
Sbjct: 61 LEAENPEKDIHLYINSPG--------GSVTAGMAIYDTMQFIKADVSTLCIGQAASMGAF 112
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL GAKG R LP++ +MI QP+G +GQA+D+EI +E+ +K L +L A H G++
Sbjct: 113 LLAGGAKGKRHCLPNARVMIHQPLGGFQGQASDIEIHAREILFIKDRLNRLLADHTGQSL 172
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E I D R ++ + +A+EYG++D VL
Sbjct: 173 ETIAQDTDRDRFMTAEQAMEYGLVDSVL 200
>gi|307250531|ref|ZP_07532475.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857424|gb|EFM89536.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 172
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 105/173 (60%), Gaps = 8/173 (4%)
Query: 102 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAI 161
K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AI
Sbjct: 2 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAI 53
Query: 162 YDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVE 221
YD M ++KP + TLC G A A LL GAKG R ALP++ +MI QP+G GQATD++
Sbjct: 54 YDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQ 113
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
I +E+ +K L + A+H G+ E++ AD R + S EA+EYG+IDKVL
Sbjct: 114 IQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 166
>gi|444911057|ref|ZP_21231233.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444718395|gb|ELW59208.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 201
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 18 DLYSRLLKDRIVMLGTPVNDDVANIIVAQLLFLESEDPDKGISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVK P+ T+C+G A ALLL AG+ G R ALP+S IMI QP+G +
Sbjct: 70 VTAGLAIYDTMQYVKCPVSTICIGQAASMGALLLLAGSPGKRYALPNSRIMIHQPLGGAQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I KE+ +++ + L+ KH G E+IE D R + S EA +YG+ID+V+
Sbjct: 130 GQASDIDIQAKEILRLRSYINGLFVKHTGHNIERIEKDTERDYFMSAEEARQYGLIDEVV 189
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G G
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 76 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ ++I D R + SP+EAVEYG+ID+V+
Sbjct: 136 GQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
Query: 275 YTEKSPEDHGVVSD 288
S D G+V+D
Sbjct: 196 ---DSSGDEGIVTD 206
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG V + I+A+ LYL+ ED EK I LYINS G G
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPG--------GS 95
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V+P + T+C G A A LL GA G R ALP+S IMI QP+G +
Sbjct: 96 VTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGAQ 155
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K L +L A H G+ EQI D R + S +EA +YG+ID+V+
Sbjct: 156 GQAVDIEIQAREILYHKQTLNQLLANHTGQPVEQIAEDTERDFFMSAAEAKDYGLIDQVI 215
Query: 275 YTEKSPEDHGVVSDL 289
+ P V+ +
Sbjct: 216 SRQNLPNQEAAVASI 230
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RI+YLG + + LI+ + LYL ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ IYD M +V+P + T+C+G A A LL G KG R +LP S IMI QP+G +
Sbjct: 69 VSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI KE+ +K L + A+H G++ E+I D R + S +EA+EYGIID+V
Sbjct: 129 GQATDIEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAMEYGIIDQV 187
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 17/205 (8%)
Query: 79 MVIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
M++P EQ P D+ S L K+RIV+LG + V LI+A+ L+L+ ED E
Sbjct: 1 MLVPIV----IEQTPRGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPE 56
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IYLYINS G G + AIYD + ++KP + T+CVG A AA+LL AG K
Sbjct: 57 KDIYLYINSPG--------GEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDK 108
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R ALP S +MI QP+G G A D+EI +E+ +K L ++ A H G+ E+IE D
Sbjct: 109 GKRYALPHSRVMIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAYHTGQPIEKIEKDT 168
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEK 278
R + S EA EYGI+D+VL ++K
Sbjct: 169 DRDFFMSAYEAKEYGIVDEVLESKK 193
>gi|195473623|ref|XP_002089092.1| GE18928 [Drosophila yakuba]
gi|194175193|gb|EDW88804.1| GE18928 [Drosophila yakuba]
Length = 253
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 119/215 (55%), Gaps = 11/215 (5%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C S+ S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CGSRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL AGA G R +LP++ IMI QP G +GQATD+ I +E+ +K +L +Y KH T
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTY 188
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
E++ + R + +P EA GIID VL E PE
Sbjct: 189 EEMCGRMERDHFMTPEEAKVLGIIDHVL--EHPPE 221
>gi|30248062|ref|NP_840132.1| ATP-dependent Clp protease proteolytic subunit [Nitrosomonas
europaea ATCC 19718]
gi|60389763|sp|Q82Y57.1|CLPP_NITEU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|30179947|emb|CAD83942.1| Clp protease [Nitrosomonas europaea ATCC 19718]
Length = 214
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI TSG + D+ S L + RI++L + L++A+ L+L+ E+ EK
Sbjct: 19 LIPMVIE-TSGRG--ERAYDIYSRLLRERIIFLVGPVTETSANLVIAQLLFLESENSEKD 75
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T A+YD + ++KP + TLCVG A A LL AGAKG
Sbjct: 76 IFLYINSPG--------GLVTAGLAVYDTIQFIKPDVSTLCVGQAASMGAFLLTAGAKGK 127
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R LP+S +MI QP+G +GQA+D+EI KE+ +K+ L ++ AKH G+T + IE D R
Sbjct: 128 RYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILALKSRLNEIMAKHTGQTVKAIERDTDR 187
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSPED 282
+ AV+YG++D VL + + ++
Sbjct: 188 DNFLGAEAAVKYGLVDAVLTSREVKQE 214
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 115/188 (61%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A + LL AG KG R ALP++ IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGKKGKRFALPNAEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + + +L ++ ++ G+ E IE D R Y S A+EYGIIDK++
Sbjct: 131 GQATEIEIAAKHILKTREKLNRILSERTGQPIEIIEKDTDRDNYMSAERALEYGIIDKIM 190
Query: 275 YTEKSPED 282
++ E+
Sbjct: 191 TRNETTEE 198
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+++ +P+ TA + D+ S L K+RIV++G + + I+A+ L+L ED EK
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + FAIYD M Y+KP + T+C G A A+LL AGAKG
Sbjct: 61 IYMYINSPG--------GSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R+ALP+S IMI QP G +GQA+D+ I+ K + + + ++ A+ G++ E++E D+ R
Sbjct: 113 RSALPNSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDR 172
Query: 256 PKYFSPSEAVEYGIIDKVL 274
Y S EA+EYG+ID+V+
Sbjct: 173 DFYMSAQEALEYGVIDQVI 191
>gi|419940383|ref|ZP_14457123.1| ATP-dependent Clp protease proteolytic subunit, partial
[Escherichia coli 75]
gi|388403370|gb|EIL63898.1| ATP-dependent Clp protease proteolytic subunit, partial
[Escherichia coli 75]
Length = 168
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 8/171 (4%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYD 163
R+++L + LI+A+ L+L+ E+ EK IYLYINS G G T +IYD
Sbjct: 2 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GVITAGMSIYD 53
Query: 164 VMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIA 223
M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +GQATD+EI
Sbjct: 54 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 113
Query: 224 RKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+E+ VK + +L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 114 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 164
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+++ +P+ TA + D+ S L K+RIV++G + + I+A+ L+L ED EK
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDPEKE 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY+YINS G G + FAIYD M Y+KP + T+C G A A+LL AGAKG
Sbjct: 61 IYMYINSPG--------GSTSAGFAIYDTMQYIKPDVHTICTGFAASFGAILLLAGAKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R+ALP+S IMI QP G +GQA+D+ I+ K + + + ++ A+ G++ E++E D+ R
Sbjct: 113 RSALPNSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDR 172
Query: 256 PKYFSPSEAVEYGIIDKVL 274
Y S EA+EYG+ID+V+
Sbjct: 173 DFYMSAQEALEYGVIDQVI 191
>gi|195146760|ref|XP_002014352.1| GL19149 [Drosophila persimilis]
gi|194106305|gb|EDW28348.1| GL19149 [Drosophila persimilis]
Length = 253
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 13/197 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH + E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTSIYVKHAKNSYEEMCQRMERDHFMTPDEAKILGIIDHVL 216
Query: 275 YTEKSPE---DHGVVSD 288
E PE D G SD
Sbjct: 217 --EHPPETVSDSGPTSD 231
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 122/208 (58%), Gaps = 11/208 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
+ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED E
Sbjct: 26 NSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPE 82
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+Y+NS G G + IYD M Y++P + T+CVG A A LL +GAK
Sbjct: 83 RDIYIYVNSPG--------GSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAK 134
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G RA+LP S IMI QP G +GQ +D+ I +E++ ++ L +L AKH GK +QI D
Sbjct: 135 GKRASLPHSRIMIHQPSGGAQGQESDIVIQAREIEKIRTLLEELLAKHTGKDVKQIREDS 194
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ + EA++YGIID + +PE
Sbjct: 195 ERDRWMNAPEALDYGIIDAIFEKRPAPE 222
>gi|407781586|ref|ZP_11128804.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
gi|407207803|gb|EKE77734.1| protease subunit of ATP-dependent Clp protease [Oceanibaculum
indicum P24]
Length = 214
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L V+ LI A+ L+L+ E+ K I LYINS G G
Sbjct: 31 DIYSRLLKERIIFLTGQVHDGVSSLICAQLLFLESENPTKDIALYINSPG--------GV 82
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++P + TLC+G A +LLL AGAKG R LP S +M+ QP G +
Sbjct: 83 VTSGLAMYDTMQYIRPDVSTLCIGQAASMGSLLLTAGAKGKRFCLPHSRVMVHQPSGGAQ 142
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ +++A L ++YA H G+ E+IE + R ++ S EA +G+ID+V+
Sbjct: 143 GQATDIEIQAREILSIRARLNRIYADHTGQPIEEIEKTLERDRFMSAEEAKNFGLIDEVV 202
Query: 275 YTEKSPE 281
PE
Sbjct: 203 SRRAIPE 209
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDEVM 190
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ +IP+ T + D+ S L K+RI+++G ++ L++A+ L+L+ ED +K
Sbjct: 6 MSYLIPYVIEQTGRGERSYDIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKD 65
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
+++YINS G G T AIYD M YVK P+ T+CVG A AA+LL AG KG
Sbjct: 66 VFVYINSPG--------GVVTAGLAIYDTMQYVKCPVSTICVGQAASMAAVLLSAGEKGK 117
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R LP S IMI QP+G +GQA+D+EI KE+ +K L + + H G+ ++I D R
Sbjct: 118 RICLPHSRIMIHQPLGGAQGQASDIEIQAKEILRMKEILNSILSNHTGQPMDRIAKDTDR 177
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S EA+ YGI+DKV+
Sbjct: 178 DFFMSAEEAMAYGIVDKVI 196
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Diplosphaera colitermitum TAV2]
Length = 222
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 9/212 (4%)
Query: 69 KSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYL 127
++ R +++ +P T + D+ S L K+RI+++G V +++A+ L+L
Sbjct: 9 RTANRHHIVSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFL 68
Query: 128 QYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALL 187
Q ED +K I+LYINS G G T AIYD + +++ + T CVG A A +L
Sbjct: 69 QMEDPKKDIHLYINSPG--------GVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVL 120
Query: 188 LGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPE 247
L AG KG R ALP+S +MI QP G GQA D+ IA KE+ + L + A+H GKTPE
Sbjct: 121 LSAGTKGKRFALPNSRVMIHQPSGGAGGQAADITIAAKEILRWRRTLSETIARHTGKTPE 180
Query: 248 QIEADIRRPKYFSPSEAVEYGIIDKVLYTEKS 279
Q++ D R Y S EA +YG++D V+ + +
Sbjct: 181 QVDKDSDRDYYLSAQEAKDYGLVDHVVTSTRD 212
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED EK I YINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDIQFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YV+ P+ T+C+G A A+LLL AGAKG R +LP + I+I QP+G ++
Sbjct: 71 VTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ ++ L ++ ++H G+ E+I D R + S EA EYGIID+V
Sbjct: 131 GQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIIDEVY 190
Query: 275 YTEK 278
K
Sbjct: 191 DVRK 194
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 12/208 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MVI TS + D+ S L K+RIV++G + L++A+ L+L+ ED +K
Sbjct: 2 PLIPMVIEQTS---RGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G + AIYD M Y+K I T+C+G+A A LL AGAKG
Sbjct: 59 DINFYINSPG--------GKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R +LP+S IMI QP+G +GQA+D+ I KE+ +K L ++ A H GK EQI+ D
Sbjct: 111 KRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKSPED 282
R + S EA YGI+D V+ T++S D
Sbjct: 171 RDFFMSGEEAKAYGIVDHVI-TDRSDLD 197
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
gi|189082462|sp|A4SDA4.1|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 11/209 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
++ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED
Sbjct: 25 QNSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
++ I++Y+NS G G + IYD M Y++P + T+CVG A A LL +GA
Sbjct: 82 DRDIFIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGA 133
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP S IMI QP G +GQ +D+ I +E++ ++ L ++ AKH GK +Q+ D
Sbjct: 134 KGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVRED 193
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ EA+EYGIID+V +PE
Sbjct: 194 SERDRWMDAGEALEYGIIDQVFEKRPAPE 222
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+A+ L+LQ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S +MI QP+G
Sbjct: 71 ITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI + + ++ L ++ A+ G+ EQI D R + + +A EYG+IDKV+
Sbjct: 131 GQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVI 190
Query: 275 YTEK 278
T K
Sbjct: 191 ETTK 194
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ +IP+ T + D+ S L K+RI+++G + L++A+ L+L+ ED +K
Sbjct: 1 MSYLIPYVIEQTGRGERSYDIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
+YLYINS G G T AIYD M Y+K P+ T+C G A AA+LL AG +G
Sbjct: 61 VYLYINSPG--------GVVTAGLAIYDTMQYIKCPVSTICTGQAASMAAVLLAAGERGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R +LP S IMI QP+G +GQA+D+EI +E+ VK L + + H G+ E+I D R
Sbjct: 113 RISLPHSRIMIHQPLGGAQGQASDIEIQAREILRVKEILNSILSNHTGQPLERIARDTDR 172
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S EA YGI+DKV+
Sbjct: 173 DFFMSADEACAYGIVDKVI 191
>gi|196010065|ref|XP_002114897.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582280|gb|EDV22353.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 226
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 72 PR-SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
PR SP++ +VI T + D+ S L K+RIV + + L++A+ L+LQ E
Sbjct: 22 PRISPLVPIVI---EKTGRGEQAYDIYSRLLKDRIVCVMGPVTDDLASLVVAQLLFLQAE 78
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
+ PI++YINS G G T IYD M YV+PPI+T CVG A +LLL A
Sbjct: 79 SSKLPIHMYINSPG--------GSVTSGLGIYDTMQYVEPPIYTWCVGQAASMGSLLLAA 130
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
G G R +LP+S IMI QP G+ GQATD+ I +E+ +K + LY KH G++ E IE
Sbjct: 131 GDNGKRHSLPNSRIMIHQPSGQAFGQATDIAIQAEEIIKLKKLINDLYKKHTGQSIENIE 190
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVL 274
+ R KY P+EA +G+IDKVL
Sbjct: 191 EAMERDKYMFPNEAAAFGLIDKVL 214
>gi|452076962|gb|AGF92935.1| ATP-dependent Clp protease proteolytic subunit ClpP [uncultured
organism]
Length = 205
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 124/215 (57%), Gaps = 14/215 (6%)
Query: 70 SKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S+PR+ V PF T ++ D+ S L K+RIV+L ++ +I+A+ LYL+
Sbjct: 2 SEPRAQV-----PFVVDKTDGQERTYDIYSRLLKDRIVFLKGPVTDELSNVIIAQMLYLE 56
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ + I LYIN+ G G T AIYD M YVKP + T+CVG A ALLL
Sbjct: 57 AENPSQDINLYINTQG--------GVVTGGLAIYDTMQYVKPEVKTICVGQASSMGALLL 108
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
G G R ALP+S I+I QP+G +GQATDVEI E+ VK + + A H G+ ++
Sbjct: 109 ATGEPGKRYALPNSRILIHQPLGGAQGQATDVEIHANELVKVKKRVNNILADHTGQPLDK 168
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPEDH 283
I+ D R + +P EA +YGIID+V+ T ++ E+
Sbjct: 169 IQEDTERDFFMAPEEAEDYGIIDEVISTRENSEEE 203
>gi|329770311|ref|ZP_08261696.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
gi|328836764|gb|EGF86416.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
Length = 215
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D EK IY YINS G
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSEVNDQVANSITSQLLFLEAQDSEKDIYFYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M ++K + T+C+G A A LL AG G R ALP++ +MI
Sbjct: 69 ------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEVMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQAT++EIA K + + +L K+ A G+T + IE D R Y S EA E
Sbjct: 123 HQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLSAEEACE 182
Query: 267 YGIIDKVLYTEKS 279
YG++DKV+Y E +
Sbjct: 183 YGLVDKVMYPENN 195
>gi|212709197|ref|ZP_03317325.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|422019641|ref|ZP_16366184.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
gi|212688109|gb|EEB47637.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|414102747|gb|EKT64337.1| ATP-dependent Clp protease proteolytic subunit [Providencia
alcalifaciens Dmel2]
Length = 206
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK I LYINS G G
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIQLYINSPG--------GV 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 84 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK+ + +L A+H GK+ E+I D R ++ S +EA EYG++D +
Sbjct: 144 GQATDIEIHAQEILKVKSRMNELMAQHTGKSIEEISRDTERDRFLSANEAKEYGLVDHI- 202
Query: 275 YTEK 278
YT +
Sbjct: 203 YTSR 206
>gi|194706198|gb|ACF87183.1| unknown [Zea mays]
Length = 301
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT-KGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 76 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 135
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 136 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 195
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ +R P+YF EA++YG+ D
Sbjct: 196 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLAD 255
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQLI 295
+L++ + S + + + L KAQ +
Sbjct: 256 TILHSLDGSFKPKDLTAQLAKAQAM 280
>gi|329121861|ref|ZP_08250476.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
gi|327467799|gb|EGF13291.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
Length = 205
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI++L + +I+A+ L+L+ ED +K I+LYINS G
Sbjct: 17 TSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDIHLYINSPG-- 74
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y++P + T+C+G+ AA+LL +GAKG R ALP S +MI
Sbjct: 75 ------GVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNVMI 128
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G ++GQAT++EI +E+ ++ EL + AKH G+ + I+ D R + + A++
Sbjct: 129 HQPLGGVQGQATEIEIHAREILRLRDELNGILAKHTGQPLDVIKKDTERDNFMTAENALK 188
Query: 267 YGIIDKVL 274
YG+IDK+L
Sbjct: 189 YGLIDKIL 196
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 EPE 193
>gi|224030041|gb|ACN34096.1| unknown [Zea mays]
gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 259
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 25/223 (11%)
Query: 66 SFCKSKPRSP--------------VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMS 111
+F S P +P ++ MVI TS + D+ S L K RIV +
Sbjct: 12 TFSSSSPHAPPLAASGYTPRREYGLVPMVIEHTS---RGERAYDIFSRLLKERIVCIHGP 68
Query: 112 FVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPP 171
L++A+ L+L+ E+ KP++LYINS G G T AIYD M Y++ P
Sbjct: 69 ITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GVVTAGLAIYDTMQYIRSP 120
Query: 172 IFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVK 231
+ TLC+G A A+LLL AGA G R ALP++ +MI QP G GQA+D+ I KE+ V+
Sbjct: 121 VTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVR 180
Query: 232 AELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
L K+YAKH G+ ++IE + R + P EA ++G+ID+V+
Sbjct: 181 DRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 223
>gi|348028491|ref|YP_004871177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
gi|347945834|gb|AEP29184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
nitratireducens FR1064]
Length = 210
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
++P S ++ MV+ TA + D+ S L K ++++ + LI+A+ L+L+
Sbjct: 6 TEPHSALVPMVV---EQTARGERSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFLEA 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 63 ENPEKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AGAKG R LP++ +MI QP+G +GQA+D EI KE+ ++K ++ +L A+H G+ E++
Sbjct: 115 AGAKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAEHTGQDYEKV 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
D R + S E+V+YG++D V+
Sbjct: 175 AKDTDRDNFLSAQESVDYGLVDSVM 199
>gi|116811645|emb|CAL25989.1| CG5045 [Drosophila melanogaster]
gi|116811649|emb|CAL25991.1| CG5045 [Drosophila melanogaster]
gi|116811651|emb|CAL25992.1| CG5045 [Drosophila melanogaster]
gi|116811653|emb|CAL25993.1| CG5045 [Drosophila melanogaster]
gi|116811655|emb|CAL25994.1| CG5045 [Drosophila melanogaster]
gi|116811657|emb|CAL25995.1| CG5045 [Drosophila melanogaster]
gi|116811659|emb|CAL25996.1| CG5045 [Drosophila melanogaster]
gi|116811661|emb|CAL25997.1| CG5045 [Drosophila melanogaster]
gi|116811663|emb|CAL25998.1| CG5045 [Drosophila melanogaster]
gi|116811665|emb|CAL25999.1| CG5045 [Drosophila melanogaster]
gi|223966785|emb|CAR93129.1| CG5045-PA [Drosophila melanogaster]
gi|223966787|emb|CAR93130.1| CG5045-PA [Drosophila melanogaster]
gi|223966789|emb|CAR93131.1| CG5045-PA [Drosophila melanogaster]
gi|223966791|emb|CAR93132.1| CG5045-PA [Drosophila melanogaster]
gi|223966795|emb|CAR93134.1| CG5045-PA [Drosophila melanogaster]
gi|223966797|emb|CAR93135.1| CG5045-PA [Drosophila melanogaster]
gi|223966799|emb|CAR93136.1| CG5045-PA [Drosophila melanogaster]
gi|223966801|emb|CAR93137.1| CG5045-PA [Drosophila melanogaster]
gi|223966803|emb|CAR93138.1| CG5045-PA [Drosophila melanogaster]
Length = 253
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|74188717|dbj|BAE28093.1| unnamed protein product [Mus musculus]
Length = 269
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 67 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 118
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 119 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 178
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 179 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 238
>gi|8393156|ref|NP_059089.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Mus musculus]
gi|5921799|sp|O88696.1|CLPP_MOUSE RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|3559935|emb|CAA06443.1| ClpP protease [Mus musculus]
gi|4454289|emb|CAA09966.1| ClpP protease [Mus musculus]
gi|12805083|gb|AAH01998.1| Caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
gi|12835038|dbj|BAB23132.1| unnamed protein product [Mus musculus]
gi|74207567|dbj|BAE40033.1| unnamed protein product [Mus musculus]
gi|74217075|dbj|BAE26636.1| unnamed protein product [Mus musculus]
gi|148706268|gb|EDL38215.1| caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
Length = 272
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
>gi|91228617|ref|ZP_01262535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|254229904|ref|ZP_04923307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262394815|ref|YP_003286669.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269965580|ref|ZP_06179694.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
gi|451970181|ref|ZP_21923408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus E0666]
gi|91187849|gb|EAS74163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|151937540|gb|EDN56395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262338409|gb|ACY52204.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269829805|gb|EEZ84040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
gi|451933695|gb|EMD81362.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus E0666]
Length = 208
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYGI+D VL
Sbjct: 174 PLEVIERDTDRDNFMSSEQAVEYGIVDAVL 203
>gi|375264871|ref|YP_005022314.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
gi|369840195|gb|AEX21339.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
Length = 208
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYGI+D VL
Sbjct: 174 PLEVIERDTDRDNFMSAEQAVEYGIVDAVL 203
>gi|383758647|ref|YP_005437632.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
gi|381379316|dbj|BAL96133.1| ATP-dependent Clp protease, protease subunit ClpP [Rubrivivax
gelatinosus IL144]
Length = 202
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L V L+ A+ L+L+ E+ +K I+LYINS G G
Sbjct: 27 DIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESENPDKDIFLYINSPG--------GS 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ +I+D M ++KP + TLC+G A + LL AGAKG R ALP+S +MI QP G +
Sbjct: 79 VSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSRVMIHQPSGGAQ 138
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ + +L ++YA+ G++ E+IEAD+ R + SPSEA +YG+ID+VL
Sbjct: 139 GQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIEADMERDMWLSPSEAKDYGLIDQVL 198
>gi|375106291|ref|ZP_09752552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
gi|374667022|gb|EHR71807.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium JOSHI_001]
Length = 202
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L + L++A+ L+L+ E+ +K I LYINS G G
Sbjct: 27 DIYSRLLRERIIFLVGPVNDATANLVVAQLLFLESENPDKEISLYINSPG--------GS 78
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ +I+D M ++KP + TLC+G A + LL AGAKG R ALP+S IMI QP G +
Sbjct: 79 VSAGMSIFDTMQFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALPNSKIMIHQPSGGAQ 138
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ + +L K+YA+ G+T E+I+AD+ R Y +P EA+EYG+IDKVL
Sbjct: 139 GQATDIEIHAREILKTREQLNKIYAERTGQTLEKIQADMERDFYMNPVEALEYGLIDKVL 198
>gi|194859835|ref|XP_001969460.1| GG10114 [Drosophila erecta]
gi|190661327|gb|EDV58519.1| GG10114 [Drosophila erecta]
Length = 253
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|195339773|ref|XP_002036491.1| GM18225 [Drosophila sechellia]
gi|116811667|emb|CAL26000.1| CG5045 [Drosophila simulans]
gi|194130371|gb|EDW52414.1| GM18225 [Drosophila sechellia]
Length = 253
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G V L++A+ L+L+ ED +K I++YINS G G
Sbjct: 19 DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDIHIYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A + LL AG KG R ALP + IMI QP+G ++
Sbjct: 71 VTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRIMIHQPLGGVQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ +K+ L +L AKH G+ E I D R + S EA +YGI+D+V+
Sbjct: 131 GQATDIDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEARKYGIVDEVI 190
Query: 275 YTEK 278
K
Sbjct: 191 SVRK 194
>gi|260773194|ref|ZP_05882110.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
gi|260612333|gb|EEX37536.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
Length = 208
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 123/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K+R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + TLCVG A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTLCVGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ ++K +L L A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILSIKNKLNTLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+ IE D R + S +AV+YGI+D +L
Sbjct: 174 PLDVIERDTDRDNFMSAQQAVDYGIVDAIL 203
>gi|386748125|ref|YP_006221333.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
gi|384554367|gb|AFI06123.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cetorum MIT 99-5656]
Length = 195
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L SV I+A+ L+L+ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLSGEINDSVASSIVAQLLFLEAEDPEKDISLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T F+IYD M +++P + T+C+G A A LL GAKG R +LP S IMI QP+G +
Sbjct: 71 VTSGFSIYDTMNFIRPDVCTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ +K L + A++ G+ EQI D R Y S EA EYG+IDKVL
Sbjct: 131 GQASDIEITAKEIIRLKGLLNSIMAENSGQDLEQIAKDTDRDFYMSALEAKEYGLIDKVL 190
>gi|116811647|emb|CAL25990.1| CG5045 [Drosophila melanogaster]
Length = 253
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|182414555|ref|YP_001819621.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177841769|gb|ACB76021.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 206
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 113/193 (58%), Gaps = 8/193 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G +V L++A+ +LQ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGSPIDDTVANLVIAQMFFLQMEDPKKDIQLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +++ I T CVG A + +LL AG KG R ALP+S +MI QP G
Sbjct: 72 VTGGMAIYDTMNFLQCDIVTYCVGMAASMSTVLLSAGTKGKRFALPNSRVMIHQPSGGAG 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+ IA KE+ + L ++ AKH GKTPEQ+E D R Y S EA +YGI+D V+
Sbjct: 132 GQAADIAIAAKEILRWRKTLNEVIAKHTGKTPEQVEKDSDRDYYMSAQEAKDYGIVDHVV 191
Query: 275 YTEKSPEDHGVVS 287
+ + + V S
Sbjct: 192 ESTREAQSIAVKS 204
>gi|417398182|gb|JAA46124.1| Putative atp-dependent clp protease proteolytic subunit
mitochondrial [Desmodus rotundus]
Length = 273
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|90410782|ref|ZP_01218797.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
gi|90328413|gb|EAS44711.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
Length = 207
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQERNAMSPITDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GAKG R LP+S +MI QP+G +GQA+D++I +E+ +K L L A+H G+
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNNLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E +E D R + S +AVEYG++D VL
Sbjct: 174 PLEIVEGDTDRDNFMSADQAVEYGLVDSVL 203
>gi|26989024|ref|NP_744449.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
KT2440]
gi|148548677|ref|YP_001268779.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
F1]
gi|339486803|ref|YP_004701331.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|395444305|ref|YP_006384558.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|421530071|ref|ZP_15976578.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|431801808|ref|YP_007228711.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
gi|38257487|sp|Q88KJ0.1|CLPP_PSEPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214701|sp|A5W635.1|CLPP_PSEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24983847|gb|AAN67913.1|AE016423_8 ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida KT2440]
gi|148512735|gb|ABQ79595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
putida F1]
gi|171362771|dbj|BAG15849.1| probable ATP-dependent clp protease [Pseudomonas putida]
gi|338837646|gb|AEJ12451.1| ATP-dependent Clp protease, proteolytic subunit [Pseudomonas putida
S16]
gi|388558302|gb|AFK67443.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
ND6]
gi|402212478|gb|EJT83868.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
S11]
gi|430792573|gb|AGA72768.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
HB3267]
Length = 213
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 87 VTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ N+KA L +L A H G+ E I+ D R + S S A EYG+ID V
Sbjct: 147 GQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGLIDSV 205
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378774981|ref|YP_005177224.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|383310944|ref|YP_005363754.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|386834993|ref|YP_006240310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|417854851|ref|ZP_12500118.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421255199|ref|ZP_15709765.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|421262286|ref|ZP_15713573.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|421264724|ref|ZP_15715690.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|425064713|ref|ZP_18467838.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
gi|18202809|sp|Q9CJM2.1|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217272|gb|EGP03161.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|356597529|gb|AET16255.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida 36950]
gi|380872216|gb|AFF24583.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. HN06]
gi|385201696|gb|AFI46551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pasteurella
multocida subsp. multocida str. 3480]
gi|401687836|gb|EJS83533.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|401689639|gb|EJS85037.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_cattle]
gi|401690987|gb|EJS86083.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Anand1_buffalo]
gi|404380899|gb|EJZ77388.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida X73]
Length = 193
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 112/196 (57%), Gaps = 9/196 (4%)
Query: 80 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYL 138
VIP TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +
Sbjct: 3 VIPMVVEQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINI 62
Query: 139 YINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAA 198
YINS G G T AIYD M +VKP I TLCVG A A LL G G R A
Sbjct: 63 YINSPG--------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIA 114
Query: 199 LPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKY 258
LPS+ +MI QP+G GQA+D++I +E+ +K L + A H G+T E+IE D R +
Sbjct: 115 LPSARVMIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNF 174
Query: 259 FSPSEAVEYGIIDKVL 274
S EA YG++D+VL
Sbjct: 175 MSAEEAKAYGLVDEVL 190
>gi|226533042|ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194700894|gb|ACF84531.1| unknown [Zea mays]
gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease proteolytic subunit isoform 1 [Zea mays]
gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease proteolytic subunit isoform 2 [Zea mays]
Length = 260
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 53 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GV 104
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ P+ TLC+G A A+LLL AGA G R ALP++ +MI QP G
Sbjct: 105 VTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQPSGGAS 164
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ V+ L K+YAKH G+ ++IE + R + P EA E+G+ID+V+
Sbjct: 165 GQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHEWGLIDEVI 224
>gi|195578155|ref|XP_002078931.1| GD23683 [Drosophila simulans]
gi|194190940|gb|EDX04516.1| GD23683 [Drosophila simulans]
Length = 253
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH T E++ + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDHFMTPEEAKVLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 115/189 (60%), Gaps = 12/189 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+K + T+C+G A A+LL G KG R +LP+S IMI QP+G E
Sbjct: 76 VSAGLAIYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAE 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G A DVEI KE+ +K ++ ++ + H G+ E+IE D R + +P EA+EYG+IDKV+
Sbjct: 136 GPAKDVEIMTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTPEEALEYGLIDKVI 195
Query: 275 YTEKSPEDH 283
PED
Sbjct: 196 ----KPEDR 200
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A + LL AGA G R ALP + IMI QP+G ++
Sbjct: 72 VTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARIMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ +K L A H G+ EQI D R + S EA +YG+ID+V+
Sbjct: 132 GQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEAKKYGLIDEVM 191
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8.1|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 123/209 (58%), Gaps = 11/209 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
++ ++ MVI TSG + D+ S L + RI++LG V LI+A+ ++L+ ED
Sbjct: 25 QNSLVPMVIE-TSGRG--ERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
E+ IY+Y+NS G G + IYD M Y++P + T+CVG A A LL +GA
Sbjct: 82 ERDIYIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGA 133
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG RA+LP S IMI QP G +GQ +D+ I +E++ ++ L ++ A H GK +Q+ D
Sbjct: 134 KGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVRED 193
Query: 253 IRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R ++ + EA++YGIID+V +PE
Sbjct: 194 SERDRWMNAEEALDYGIIDQVFAKRPAPE 222
>gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
Length = 196
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEIEDGIASAIVAQMLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T F+IYD M Y+KP + T+C+G A A LL GA+G R ALP+S IMI QP+G
Sbjct: 72 ITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGAR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L + AK+ G+ +I+ D R + S +EA EYG+IDKVL
Sbjct: 132 GQATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLIDKVL 191
Query: 275 YTEKS 279
EKS
Sbjct: 192 --EKS 194
>gi|373486607|ref|ZP_09577280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
gi|372011468|gb|EHP12063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
Length = 198
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 9/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+ I++LG + SV I+A+ L+L+ ED +K I +YINS G G
Sbjct: 23 DIYSRLLKDNIIFLGTAIDDSVANAIVAQMLFLESEDPDKDIQIYINSPG--------GS 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +VK I T C+G A LL AG KG R ALP++ IMI QP G +
Sbjct: 75 VTAGLAIYDTMQFVKNDIVTYCIGQCASMGAHLLAAGTKGKRFALPNARIMIHQPSGGAQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EI KE++ +K L ++KH G+T +++ D+ R + S EA+EYGI+DKVL
Sbjct: 135 GQATEIEITYKEIQRLKDNLAGTFSKHTGQTLKKVMKDMDRDYFMSAEEAMEYGIVDKVL 194
Query: 275 YTEKS 279
TE+S
Sbjct: 195 -TERS 198
>gi|170720927|ref|YP_001748615.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
W619]
gi|325274289|ref|ZP_08140400.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
gi|226706466|sp|B1J692.1|CLPP_PSEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169758930|gb|ACA72246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida W619]
gi|324100572|gb|EGB98307.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
Length = 213
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHLYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 87 VTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ N+KA L +L A H G+ E I+ D R + S S A EYG+ID V
Sbjct: 147 GQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGLIDSV 205
>gi|387127882|ref|YP_006296487.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
gi|386274944|gb|AFI84842.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM1]
Length = 211
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
Query: 70 SKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
S+ +PV ++P TA + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 6 SEQLNPVQNALVPIVVEQTARGERSYDIYSRLLKERIIFLVGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ +K I+LYINS G G T AIYD M ++KP + TLC+G A ALLL
Sbjct: 66 SENPDKDIHLYINSPG--------GAVTAGLAIYDTMQFIKPQVSTLCIGQAASMGALLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AGAK R ALP+S IM+ QP+G +GQA+D++I KE+ +++ L + A H G+ +
Sbjct: 118 TAGAKDKRFALPNSRIMVHQPLGGFQGQASDIDIHAKEILSIRDRLNGIMAHHTGQDINK 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R + + +A EYG+ID V+
Sbjct: 178 IERDTDRDNFMNGEQAAEYGLIDSVM 203
>gi|116793577|gb|ABK26796.1| unknown [Picea sitchensis]
Length = 248
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 116/199 (58%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI TS + D+ S L K RI+ + +++A+ L+L+ E+ +KP
Sbjct: 37 LIPMVIEHTS---RGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKP 93
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I +YINS G G T AIYD M Y+K P+ TLC+G A +LLL AG+ G
Sbjct: 94 INMYINSPG--------GVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGE 145
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP++ +MI QP G GQA+D+ I KE+ + L LYAKH G+T E+IE + R
Sbjct: 146 RRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMER 205
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ SP EA E+G+ID+V+
Sbjct: 206 DTFMSPDEAKEFGLIDEVI 224
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVI 188
>gi|421521992|ref|ZP_15968641.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
gi|402754253|gb|EJX14738.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
LS46]
Length = 213
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 87 VTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ N+KA L +L A H G+ E I+ D R + S S A EYG+ID V
Sbjct: 147 GQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAEYGLIDSV 205
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 121/207 (58%), Gaps = 11/207 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ ++ + D+ S L K+RI++LG + V LI+A+ L+L+ ED EK
Sbjct: 2 PLIPMVVEQSN---RGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T A+YD M Y+KP + T+C+G A ALLL AGAKG
Sbjct: 59 DINFYINSPG--------GVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R +LP+S IMI QP+G +GQA+D++I E+ +K L + +KH G+ ++I D
Sbjct: 111 KRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKSPE 281
R + S +A EYG++D V+ + E
Sbjct: 171 RDFFMSGDQAKEYGLVDHVVASRDELE 197
>gi|74317695|ref|YP_315435.1| ATP-dependent Clp protease proteolytic subunit [Thiobacillus
denitrificans ATCC 25259]
gi|90183186|sp|Q3SI98.1|CLPP_THIDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74057190|gb|AAZ97630.1| peptidase S14, ClpP [Thiobacillus denitrificans ATCC 25259]
Length = 212
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ +K IYLYINS G G
Sbjct: 33 DIYSRLLKERVIFLVGPVNDATANLIVAQMLFLESENPDKDIYLYINSPG--------GS 84
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M ++KP + TLC+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 85 VSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQ 144
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ +KA L + AKH G++ E I+ D R + S ++V+YG++DKVL
Sbjct: 145 GQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVL 204
>gi|398847904|ref|ZP_10604778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
gi|398250862|gb|EJN36154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
sp. GM84]
Length = 213
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 87 VTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ N+KA L +L A H G+ E I+ D R + S S A EYG+ID V
Sbjct: 147 GQATDIEIHAQEILNIKARLNELLAYHTGQELETIKRDTERDNFMSASRAAEYGLIDSV 205
>gi|222087754|ref|YP_002546291.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
radiobacter K84]
gi|221725202|gb|ACM28358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
Length = 214
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
S P S + +V ++ + D+ S L + RI++L +V+ L+ A+ L+L+
Sbjct: 5 SSPMSEAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEA 64
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ KPI LYINS G G T A+YD M Y++ P+ TLC+G A + LL
Sbjct: 65 ENSRKPISLYINSPG--------GVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLM 116
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
AG G R+ALP+S+I I QP+G +GQA+D+ I EM+ K + +LYA+H G+T E+
Sbjct: 117 AGQAGERSALPNSSIHIHQPLGGFQGQASDMLIHAAEMERTKHRMTRLYAEHCGRTYEEF 176
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E + R + + +A+E+G+ID++L
Sbjct: 177 ERAMDRDHFMTAEQALEWGLIDRIL 201
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L + L++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAK 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + +K L K+ ++ G+ E+I+ D R + S EA EYG+ID+V+
Sbjct: 131 GQATDIEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEAKEYGLIDEVI 190
>gi|429737530|ref|ZP_19271388.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429152336|gb|EKX95166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 197
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI QP+G +
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ + A+H G+ PE+I D R + S EA YG+ID+V+
Sbjct: 126 GQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLIDEVV 185
Query: 275 YTEKS 279
K+
Sbjct: 186 TRPKA 190
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +I+A+ L+L+ ED +K I+LYINS G G
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A ++LL AGAKG R ALP + IMI QP+G +
Sbjct: 66 VTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ ++ A+H G+ +I D R + S EA EYG+ID+V+
Sbjct: 126 GQSTDIQIQAKEILRLREVGNEILARHTGQDTAKINIDTERDNFMSAEEAKEYGLIDEVV 185
>gi|443311871|ref|ZP_21041494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442778107|gb|ELR88377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 219
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V + I+A+ L+L ED EK I LYINS G G
Sbjct: 32 DIYSRLLRERIVFLGTQVDDAVADSIVAQLLFLDAEDPEKDIQLYINSPG--------GS 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + ++P + T+C G A A LL AGAKG R +LPS+ IMI QP+G +
Sbjct: 84 VTAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGAKGKRMSLPSARIMIHQPLGGAQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ K+ L +L A H GK E+IEAD R + S EA YG+ID V+
Sbjct: 144 GQAVDIEIQAKEILYHKSRLNELLAHHTGKPLERIEADTERDFFMSAEEAKNYGLIDSVI 203
Query: 275 YTEKSPEDHGVVS 287
+ P+ V+
Sbjct: 204 SRQNIPQAGATVT 216
>gi|348550684|ref|XP_003461161.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Cavia porcellus]
Length = 272
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
>gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 198
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 116/200 (58%), Gaps = 12/200 (6%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P + T W D+ + LY+ RI++LG +T I+A LYL ED K
Sbjct: 6 PKVPYQMPGSQYTEW----IDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNSK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I LYINS G G T AIYD M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIILYINSPG--------GSVTAGMAIYDTMQHIKSDVVTVCVGLAASMGSFLLAAGKKG 113
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP G GQATD+EI +E+ ++ +L ++YA++ G++ E+IE D+
Sbjct: 114 KRIALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNEIYAQNTGQSLEKIEKDMD 173
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA EYG+ID+V+
Sbjct: 174 RDFFMSADEAKEYGLIDQVI 193
>gi|386012908|ref|YP_005931185.1| protein ClpP [Pseudomonas putida BIRD-1]
gi|397698114|ref|YP_006535997.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
gi|313499614|gb|ADR60980.1| ClpP [Pseudomonas putida BIRD-1]
gi|397334844|gb|AFO51203.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
DOT-T1E]
Length = 192
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 14 DIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPG--------GS 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AGAKG R LP+S +MI QP+G +
Sbjct: 66 VTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQATD+EI +E+ N+KA L +L A H G+ E I+ D R + S S A EYG+ID V
Sbjct: 126 GQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGLIDSV 184
>gi|330446593|ref|ZP_08310245.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490784|dbj|GAA04742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 207
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GAKG R LP+S +MI QP+G +GQA+D++I +E+ +K L L A+H G+
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEIIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + LI+A+ L+L+ ++ ++ IYLYINS G G+
Sbjct: 29 DIYSRLLKDRIIFIGQQIEDHMANLIIAQLLFLESDEPDQDIYLYINSPG--------GH 80
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+KP + T+C+G A ALLL AG KG R ALP+S +MI QP G +
Sbjct: 81 VSSGLAIYDTMQYIKPDVQTICIGQAASMGALLLTAGTKGKRFALPNSRVMIHQPSGGFQ 140
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I +E+ V+ L + AKH G+ + I D R + + +A EYG+ID V+
Sbjct: 141 GQSTDIQIHAEEILKVRDTLDDILAKHSGQPKDVIRRDTERDHFMTGEQAKEYGLIDNVI 200
Query: 275 YTEKSPED 282
+ +D
Sbjct: 201 TSRTESKD 208
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 119/203 (58%), Gaps = 9/203 (4%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ VIP+ T + D+ S L K+RIV+LG + V I+A+ L+L ED EK
Sbjct: 1 MSSVIPYVIEQTGRGERSYDIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
IY YINS G G + FAIYD M YVKP + T+C G A AA+LL AGAKG
Sbjct: 61 IYFYINSPG--------GSTSAGFAIYDTMQYVKPDVQTICSGMAASFAAILLMAGAKGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP+S IMI QP G +GQA+D+ I+ + +A L + A+ G+ E+IE D+ R
Sbjct: 113 RFALPNSEIMIHQPHGGAQGQASDIAISANRILRTRAVLNTIAAECTGQPLERIEKDMDR 172
Query: 256 PKYFSPSEAVEYGIIDKVLYTEK 278
+ S EA EYGIID+V+ K
Sbjct: 173 DYFMSADEAREYGIIDQVITPNK 195
>gi|78778230|ref|YP_394545.1| ATP-dependent Clp protease proteolytic subunit [Sulfurimonas
denitrificans DSM 1251]
gi|124015202|sp|Q30NX1.1|CLPP_SULDN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78498770|gb|ABB45310.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
denitrificans DSM 1251]
Length = 196
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 10/202 (4%)
Query: 81 IPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLY 139
IP+ TA + D+ S L K+RI+ L +V I+A+ L+L+ ED EK IY Y
Sbjct: 4 IPYVVEKTARGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFY 63
Query: 140 INSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAAL 199
INS G G T AIYD M Y++P + T+CVG A A LL +GAKG R AL
Sbjct: 64 INSPG--------GVVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYAL 115
Query: 200 PSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYF 259
P + IMI QP+G +GQATD+ I KE+ +K EL + AK+ ++ +++E D R +
Sbjct: 116 PHARIMIHQPLGGAQGQATDIAIQAKEILRMKEELNAILAKNCSQSIKKVEKDTDRDNFM 175
Query: 260 SPSEAVEYGIIDKVLYTEKSPE 281
S E+ EYG+ID+VL +KS E
Sbjct: 176 SAEESKEYGMIDEVL-LKKSKE 196
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MV+ ++ + D+ S L K+RI++LG + V LI+A+ L+L+ ED +K
Sbjct: 2 PLIPMVVEQSN---RGERAYDIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T AIYD + Y+KP + T+C+G A ALLL AG G
Sbjct: 59 DINFYINSPG--------GVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP++ IMI QP+G +GQATD++I E+ +K L ++ +KH G+ E++ AD
Sbjct: 111 KRFALPNARIMIHQPMGGAQGQATDIKIQATEILRMKDVLNEILSKHTGQNIERVAADTE 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKSPED 282
R + S +A+EYGI+D+V+ E+
Sbjct: 171 RDFFMSGQQALEYGIVDRVVSDRSQLEE 198
>gi|406597483|ref|YP_006748613.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407684497|ref|YP_006799671.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407688425|ref|YP_006803598.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407700789|ref|YP_006825576.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|406374804|gb|AFS38059.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
gi|407246108|gb|AFT75294.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'English Channel 673']
gi|407249936|gb|AFT79121.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Black Sea 11']
gi|407291805|gb|AFT96117.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 209
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TS + D+ S L K +++L + LI+A+ L+L+ E+
Sbjct: 8 PMNALVPMVVEQTSKG---ERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL AG
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMAIYDTMKFIKPDVSTVCMGQAASMGAFLLSAG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A H G+ E++
Sbjct: 117 AKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLMADHTGQDYEKVAR 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S +EA EYG++D+VL
Sbjct: 177 DTDRDNFLSATEAKEYGLVDQVL 199
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + +A+L K+ ++ G+ ++IE D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTRAKLNKILSERTGQPIDKIEKDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 APE 193
>gi|329767857|ref|ZP_08259372.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
gi|328838776|gb|EGF88373.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
Length = 215
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D EK IY YINS G
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M ++K + T+C+G A A LL AG G R ALP++ +MI
Sbjct: 69 ------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEVMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQAT++EIA K + + +L K+ A G+T + IE D R Y + EA E
Sbjct: 123 HQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLTAEEACE 182
Query: 267 YGIIDKVLYTEKS 279
YG++DKV+Y E +
Sbjct: 183 YGLVDKVMYPENN 195
>gi|153835695|ref|ZP_01988362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
harveyi HY01]
gi|156973712|ref|YP_001444619.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi ATCC
BAA-1116]
gi|269961045|ref|ZP_06175414.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi
1DA3]
gi|350530714|ref|ZP_08909655.1| ATP-dependent Clp protease proteolytic subunit [Vibrio rotiferianus
DAT722]
gi|388602070|ref|ZP_10160466.1| ATP-dependent Clp protease proteolytic subunit [Vibrio campbellii
DS40M4]
gi|424042695|ref|ZP_17780376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-02]
gi|424047074|ref|ZP_17784635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-03]
gi|444425230|ref|ZP_21220675.1| ATP-dependent Clp protease proteolytic subunit [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|226706635|sp|A7MV87.1|CLPP_VIBHB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148867676|gb|EDL66952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
harveyi HY01]
gi|156525306|gb|ABU70392.1| hypothetical protein VIBHAR_01417 [Vibrio harveyi ATCC BAA-1116]
gi|269834264|gb|EEZ88354.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi
1DA3]
gi|408884372|gb|EKM23116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-03]
gi|408887529|gb|EKM26081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-02]
gi|444241518|gb|ELU53041.1| ATP-dependent Clp protease proteolytic subunit [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 208
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYGI+D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGIVDAVL 203
>gi|354479226|ref|XP_003501814.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Cricetulus griseus]
gi|344237637|gb|EGV93740.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Cricetulus griseus]
Length = 272
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
>gi|291614263|ref|YP_003524420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
gi|291584375|gb|ADE12033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
Length = 208
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+V+L LI+A+ L+L+ E+ +K I+ YINS G G
Sbjct: 33 DIYSRLLKERVVFLVGEVNDHTANLIVAQMLFLESENPDKDIHFYINSPG--------GS 84
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M ++KP + TLC+G A A LL AGAKG R ALP+ST+MI QP+G
Sbjct: 85 ISAGMAIYDTMQFIKPQVSTLCIGMAASMGAFLLQAGAKGKRFALPNSTVMIHQPLGGFR 144
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI + + +++ L L A+H G+T E+I D R + S EAVEYG++D+VL
Sbjct: 145 GQASDIEIHARYILSLRERLYALMAQHTGRTVEEIARDSERDNFLSAKEAVEYGLVDQVL 204
>gi|237807855|ref|YP_002892295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
gi|237500116|gb|ACQ92709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
Length = 207
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 8/201 (3%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
SP+ ++V TA + D+ S L K R+++L + LI+A+ L+L+ E+ +
Sbjct: 11 SPLNSLVPIVVEQTARGERSYDIYSRLLKERVIFLTGQVEDQMANLIVAQLLFLESENPD 70
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K IY+YINS G G T AIYD + ++KP + T+C+G A A LL AG K
Sbjct: 71 KDIYIYINSPG--------GSVTAGMAIYDTLKFIKPDVSTVCMGQACSMGAFLLSAGTK 122
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R LPS+ +MI QP+G +GQA+D++I E+ +K L L A+H G+ E+IE D
Sbjct: 123 GKRFCLPSARVMIHQPLGGFQGQASDIQIHAMEILKIKERLNNLLAEHTGQPLERIERDT 182
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYG++D +L
Sbjct: 183 DRDNFMSADQAVEYGLVDAIL 203
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + + +L ++ A+ G+ E+IE D R + + EA YG+ID+V+
Sbjct: 131 GQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYGLIDEVM 190
Query: 275 Y 275
+
Sbjct: 191 H 191
>gi|226501814|ref|NP_001150578.1| LOC100284211 [Zea mays]
gi|195640324|gb|ACG39630.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
++ MVI TS + D+ S L K RIV + L++A+ L+L+ E+ KP
Sbjct: 37 LVPMVIEHTS---RGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKP 93
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
++LYINS G G T AIYD M Y++ P+ TLC+G A A+LLL AGA G
Sbjct: 94 VHLYINSPG--------GVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQ 145
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP++ +MI QP G GQA+D+ I KE+ V+ L K+YAKH G+ ++IE + R
Sbjct: 146 RRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMER 205
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ P EA ++G+ID+V+
Sbjct: 206 DMFMDPEEAHDWGLIDEVI 224
>gi|406999542|gb|EKE17145.1| hypothetical protein ACD_10C00602G0002 [uncultured bacterium]
Length = 209
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L L++A+ L+L+ ++ +K IY YINS G G
Sbjct: 32 DIYSRLLKERVIFLVGPVNDITANLVVAQLLFLEADNPDKDIYFYINSPG--------GS 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 84 VTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ +++ L ++ A+H G+ E+IE D R + S +EA EYG+IDKVL
Sbjct: 144 GQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSSAEAAEYGLIDKVL 203
>gi|380789473|gb|AFE66612.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Macaca mulatta]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M+IP T + D+ S L K+RIV++G + + L++A+ L+L+ ED EK +Y
Sbjct: 1 MLIPMVIEQTGRGERAYDIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVY 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
+YINS G G T AIYD M Y+K P+ T+C+G A AA+LL G G R
Sbjct: 61 VYINSPG--------GVITSGLAIYDTMQYIKCPVSTICIGQAASMAAVLLAGGEPGKRI 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
ALPS+ IM+ QP+G +GQA D+EI +E+ +K L + H + E+IEAD R
Sbjct: 113 ALPSARIMLHQPLGGAQGQAVDIEIHAREILRLKERLNDILTYHTKQPREKIEADTDRDF 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA EYGIID+V+
Sbjct: 173 FMSAEEAKEYGIIDQVI 189
>gi|383410319|gb|AFH28373.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Macaca mulatta]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|431795130|ref|YP_007222035.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785356|gb|AGA70639.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 202
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 11/183 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V +I+A+ L+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGGPVSDDVANVIVAQLLFLEAEDPEKDIFLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI---G 211
+ AIYD M Y++P + T+CVG A A LL AGAKG R ALP++ I+I QP+ G
Sbjct: 72 ISAGMAIYDTMQYIRPDVHTICVGLAASMGAFLLTAGAKGKRTALPNAEILIHQPLIGGG 131
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
I GQAT++EI K + +K + ++ A+ G+ EQIEAD R +Y + EA YG+ID
Sbjct: 132 GISGQATEIEIHAKHLLRIKERMNRILAERTGQAFEQIEADTDRDRYMTAEEAKTYGLID 191
Query: 272 KVL 274
+VL
Sbjct: 192 EVL 194
>gi|355703037|gb|EHH29528.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Macaca mulatta]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|401680587|ref|ZP_10812502.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429760069|ref|ZP_19292559.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|400218495|gb|EJO49375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. ACP1]
gi|429178474|gb|EKY19752.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella atypica KON]
Length = 197
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AGAKG R ALP + +MI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRFALPHARVMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL + A G+ E + D R + S +AVEYG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGILAARSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVL 189
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A + LL AGAKG R ALP + IMI QP+G ++
Sbjct: 72 VTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARIMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ ++ L + + H G+ E+I D R + S EA +YGIID+V+
Sbjct: 132 GQATDIDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEEAKKYGIIDEVM 191
>gi|149028159|gb|EDL83597.1| similar to Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp) [Rattus
norvegicus]
Length = 333
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 131 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 182
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 183 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 242
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 243 GQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 302
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKKRLNDFLAEHTGQPIERIAEDTERDFFMSPDEAREYGLIDQVI 188
>gi|422016474|ref|ZP_16363057.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
gi|414092673|gb|EKT54346.1| ATP-dependent Clp protease proteolytic subunit [Providencia
burhodogranariea DSM 19968]
Length = 206
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
K + ++ MVI TS + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 9 KLASQMALVPMVIEQTS---RGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ EK I LYINS G G T +IYD M ++KP + T+C+G A A LL
Sbjct: 66 AENPEKDIQLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLL 117
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
AG KG R LP+S +MI QP+G +GQATD+EI +E+ VK+ + +L A H GK+ E+
Sbjct: 118 TAGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMALHTGKSIEE 177
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
I D R ++ S +EA EYG++D++ YT +
Sbjct: 178 INRDTERDRFLSANEAKEYGLVDQI-YTSR 206
>gi|91076194|ref|XP_971998.1| PREDICTED: similar to caseinolytic protease, ATP-dependent,
proteolytic subunit homolog [Tribolium castaneum]
gi|270014730|gb|EFA11178.1| hypothetical protein TcasGA2_TC004785 [Tribolium castaneum]
Length = 234
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ LI+A+ L+LQ E KPI++YINS G G
Sbjct: 40 DIYSRLLKERIICLMGPINDPMSSLIVAQLLFLQSESTNKPIHMYINSPG--------GS 91
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y+ PPI T CVG A A+LLL AG+ G R +LP + IMI QP G +
Sbjct: 92 VTAGLGIYDTMQYILPPIATWCVGQAASMASLLLAAGSPGMRHSLPHARIMIHQPSGGAQ 151
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K+++ LY KH G E+IE + R + SP EA +GIIDK+L
Sbjct: 152 GQATDIKIQAEEILKLKSQINNLYVKHTGLALEKIERSMERDMFMSPVEAQSFGIIDKIL 211
>gi|395850953|ref|XP_003798036.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Otolemur garnettii]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 112/184 (60%), Gaps = 10/184 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L L++A+ L+L+ E+ +K IY YINS G G
Sbjct: 26 DIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESENPDKDIYFYINSPG--------GS 77
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPI--GR 212
T +IYD M ++KP + TLC+G A A LL AG KG R ALP+S +MI QP+ G
Sbjct: 78 VTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRVMIHQPLISGG 137
Query: 213 IEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDK 272
+ GQA+D+EI +E+ +K +L ++ A+H GK+ EQIE D R + S EA +YG+IDK
Sbjct: 138 LGGQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIERDTDRDNFMSAQEAADYGLIDK 197
Query: 273 VLYT 276
V+ T
Sbjct: 198 VITT 201
>gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group]
gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group]
Length = 386
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 3/203 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 220
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+AFAI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 221 ASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVH 280
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ ++ P+YF EA++YG+ D
Sbjct: 281 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLAD 340
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQ 293
+L++ + S + + + L KAQ
Sbjct: 341 TILHSLDGSFKPKDLTAQLAKAQ 363
>gi|339478022|ref|YP_004706842.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Moranella endobia PCIT]
gi|338172573|gb|AEI74974.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Moranella endobia PCIT]
Length = 194
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + +LI+A+ ++L+ E+ EK I LYINS G G
Sbjct: 19 DIFSRLLKDRIIFMTGPVEEYMADLIVAQLMFLEAENPEKDICLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP I T C+G A A LL AGAKG R LP+S IMI QP+G
Sbjct: 71 ITAGMSIYDTMQFLKPDISTFCLGQAASMGAFLLAAGAKGKRFCLPNSRIMIHQPLGGFH 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ VK + +L AKH G++ + IE D R ++ S EA++YGI+D VL
Sbjct: 131 GQATDIEIHAREILKVKVRMNELMAKHTGQSLDVIERDTERDRFLSAPEALDYGIVDYVL 190
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 76 VITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+I +P T + D+ S L K+RIV+LG + V LI+A+ L+L+ ED +K
Sbjct: 4 IIDQYVPMVVENTGRYERAYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDK 63
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I LYINS G G + AIYD M YVK + T+C+G A A+LL G KG
Sbjct: 64 DIQLYINSPG--------GSVSAGLAIYDTMQYVKCDVTTICIGQAASMGAVLLAGGTKG 115
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R +LP+S IMI QP+G EG A DVEI KE+ +K ++ ++ + H G+ E+IE D
Sbjct: 116 KRFSLPNSRIMIHQPLGGAEGPAKDVEIMTKELLRIKNKINEILSLHTGQPIERIERDTD 175
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + +P +A+EYG+IDKV+
Sbjct: 176 RDFFMTPEDALEYGLIDKVI 195
>gi|242091575|ref|XP_002441620.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
gi|241946905|gb|EES20050.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
Length = 388
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 163 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 222
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 223 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVH 282
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ ++ P+YF EA++YG+ D
Sbjct: 283 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLAD 342
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQLI 295
+L++ + S + + + L KAQ +
Sbjct: 343 TILHSLDGSFKPKDLTAQLAKAQAM 367
>gi|189065189|dbj|BAG34912.1| unnamed protein product [Homo sapiens]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESSKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|195118808|ref|XP_002003928.1| GI20379 [Drosophila mojavensis]
gi|193914503|gb|EDW13370.1| GI20379 [Drosophila mojavensis]
Length = 223
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 115/197 (58%), Gaps = 13/197 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 14 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 66 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH + +++ + + R + +P EA GIID VL
Sbjct: 126 GQATDILIHAEEIIKIKRQLTNIYVKHAKNSYDEMCSRMERDHFMTPEEAKTLGIIDHVL 185
Query: 275 YTEKSPE---DHGVVSD 288
E PE D G SD
Sbjct: 186 --EHPPETVSDSGPTSD 200
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V L++A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + Y++P + T+CVG A A LL AG KG R ALP++ IMI QP G +
Sbjct: 72 ITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + N+K L K+ A+ G+ E+I+ D R + + EA EYGIID+V+
Sbjct: 132 GQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYGIIDEVI 191
>gi|402903915|ref|XP_003914800.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Papio anubis]
Length = 277
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|387131588|ref|YP_006294478.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
gi|386272877|gb|AFJ03791.1| ATP-dependent Clp protease proteolytic subunit [Methylophaga sp.
JAM7]
Length = 211
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 114/184 (61%), Gaps = 9/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+++L + LI+A+ L+L+ E+ +K I+LYINS G G
Sbjct: 32 DIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIHLYINSPG--------GA 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC+G A ALLL AGA G R ALP+S +M+ QP+G +
Sbjct: 84 VTAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAAGKRFALPNSRMMVHQPLGGFQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I KE+ +++ L ++ + H G+ EQIE D R + + +A +YG+ID VL
Sbjct: 144 GQASDIDIHAKEILSIRDRLNRIMSHHTGQKIEQIEKDTDRDNFMNGEQAAKYGLIDSVL 203
Query: 275 YTEK 278
TE+
Sbjct: 204 -TER 206
>gi|342217854|ref|ZP_08710492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
gi|341592841|gb|EGS35701.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Megasphaera sp. UPII 135-E]
Length = 198
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+L + +++A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIVFLSGQVEDHMANVLIAQLLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP I T+C+G+A A++LL AG +G R ALP S +MI QP+G ++
Sbjct: 72 VTAGLAIYDTMQYIKPDISTICIGSAASMASVLLAAGTRGKRFALPHSQVMIHQPLGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ EL + + H G+ E IE D R + + A YG+ID +L
Sbjct: 132 GQATDIEIHAREILRMRKELNGILSAHTGQPLEVIEKDTERDNFLTAEAAKAYGLIDDIL 191
Query: 275 YTEKSPE 281
T PE
Sbjct: 192 -TRPKPE 197
>gi|332141945|ref|YP_004427683.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862350|ref|YP_006977584.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
gi|327551967|gb|AEA98685.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819612|gb|AFV86229.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii AltDE1]
Length = 209
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + ++ MV+ TS + D+ S L K +++L + LI+A+ L+L+ E+
Sbjct: 8 PMNALVPMVVEQTSKG---ERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFLEAEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
EK I+LYINS G G T AIYD M ++KP + T+C+G A A LL AG
Sbjct: 65 PEKDIFLYINSPG--------GSVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLSAG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A H G+ E++
Sbjct: 117 AKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLLADHTGQDYEKVAR 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S +EA EYG++D+VL
Sbjct: 177 DTDRDNFLSATEAKEYGLVDQVL 199
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|153839648|ref|ZP_01992315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|260902813|ref|ZP_05911208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|417320363|ref|ZP_12106909.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|433657174|ref|YP_007274553.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
gi|149746838|gb|EDM57826.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|308108649|gb|EFO46189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|328473326|gb|EGF44174.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
gi|432507862|gb|AGB09379.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus BB22OP]
Length = 208
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+
Sbjct: 114 AFLLAGGAAGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYGI+D VL
Sbjct: 174 PLEVIERDTDRDNFMSAEQAVEYGIVDAVL 203
>gi|31340017|sp|Q8DG26.2|CLPP_VIBVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389705|sp|Q7MMG7.2|CLPP_VIBVY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 200
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+I ++P T+ + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 2 SPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL GA
Sbjct: 62 DKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 113
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+ E IE D
Sbjct: 114 PGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKTKLNKLLAEHTGQPLEVIERD 173
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYG++D VL
Sbjct: 174 TDRDNFMSADQAVEYGLVDAVL 195
>gi|344208219|ref|YP_004793360.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
gi|343779581|gb|AEM52134.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia JV3]
Length = 202
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENPEKPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ A+YD M Y+ P+ TLC+G A + LL AG G+RAAL ++++ + QP+G ++
Sbjct: 75 ISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALANASLHVHQPLGGVQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G++ E++E + R ++ S +A ++G+ID+VL
Sbjct: 135 GQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEEVEQTLDRDRFMSAEQACQWGLIDQVL 194
>gi|425066829|ref|ZP_18469949.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
gi|404380615|gb|EJZ77105.1| ATP-dependentlp protease proteolytic subunit [Pasteurella multocida
subsp. gallicida P1059]
Length = 188
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++LG + LI+A+ L+L+ ED EK I +YINS G
Sbjct: 6 TARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDINIYINSPG-- 63
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M +VKP I TLCVG A A LL G G R ALPS+ +MI
Sbjct: 64 ------GSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARVMI 117
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G GQA+D++I +E+ +K L + A H G+T E+IE D R + S EA
Sbjct: 118 HQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNFMSAEEAKA 177
Query: 267 YGIIDKVL 274
YG++D+VL
Sbjct: 178 YGLVDEVL 185
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 21 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 73 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 133 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 192
Query: 275 YTE 277
E
Sbjct: 193 VPE 195
>gi|296232651|ref|XP_002761668.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Callithrix jacchus]
Length = 273
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|403295988|ref|XP_003938903.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Saimiri boliviensis boliviensis]
Length = 273
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|353327928|ref|ZP_08970255.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 213
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 8/202 (3%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
+T++ T+ + D+ S L K RI+++ ++ +I+A+ L+L+ E+ +K I
Sbjct: 6 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 65
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
++YINS G G T +IYD M Y+ P + TLC+G A +LLL AGAKG R
Sbjct: 66 HMYINSPG--------GVVTAGLSIYDTMQYISPNVSTLCIGQAASMGSLLLAAGAKGKR 117
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
+LP S IMI QP G +GQATD+EI KE+ +K +L ++Y KH G + ++IE + R
Sbjct: 118 HSLPHSRIMIHQPSGGYQGQATDIEIHAKEILRIKKKLNQIYEKHTGHSLKKIEGMMERD 177
Query: 257 KYFSPSEAVEYGIIDKVLYTEK 278
K+ P EA++ G+IDKV+ K
Sbjct: 178 KFLDPIEAMKLGLIDKVIAERK 199
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG V + I+A+ L+L ED EK I LYINS G G
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V+P + T+C G A A L+ AGA G R +LPSS IMI QP+G +
Sbjct: 94 VTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLMAAGAAGKRMSLPSSRIMIHQPLGGAQ 153
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ K +L +L A H G+ E+IEAD R + S +EA +YG++D+V+
Sbjct: 154 GQAVDIEIQAKEILYHKRKLNELLAHHTGQPLERIEADTERDFFMSAAEAKDYGLVDQVI 213
Query: 275 YTEKSP 280
+ P
Sbjct: 214 LKQNLP 219
>gi|89073230|ref|ZP_01159760.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90579278|ref|ZP_01235088.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
gi|89050940|gb|EAR56404.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90440111|gb|EAS65292.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
angustum S14]
Length = 207
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GAKG R LP+S +MI QP+G +GQA+D++I +E+ +K L L A+H G+
Sbjct: 114 AFLLAGGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E +E D R + S +AVEYG++D VL
Sbjct: 174 PLEVVERDTDRDNFMSAEQAVEYGLVDAVL 203
>gi|296123572|ref|YP_003631350.1| endopeptidase Clp [Planctomyces limnophilus DSM 3776]
gi|296015912|gb|ADG69151.1| Endopeptidase Clp [Planctomyces limnophilus DSM 3776]
Length = 202
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 11/205 (5%)
Query: 77 ITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+T ++P+ ++ D+ S L ++RI+ LG +V I+A+ L+LQ+ED +
Sbjct: 1 MTNLVPYVIEKNGRDERAMDIYSRLLRDRIIILGSGIDDTVANTIVAQLLFLQFEDSKAD 60
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+LYINS G G T AIYD M Y+ + T C+G ALLL AGA G
Sbjct: 61 IHLYINSPG--------GSITAGMAIYDTMQYLSCDVATYCLGQCASMGALLLTAGAAGK 112
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP+S IMI QP+ ++G AT++EI KE+ VK + ++ KH G+T +QIE D R
Sbjct: 113 RHALPNSRIMIHQPLAGMQGTATELEIHAKEVLRVKRRMNEILLKHTGQTYDQIERDTDR 172
Query: 256 PKYFSPSEAVEYGIIDKVLYTEKSP 280
+ P EA YG+IDK+L EK P
Sbjct: 173 DNFMMPDEAKSYGLIDKIL--EKMP 195
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + IMI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL + A G+ E + D R + S +AVEYG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVL 189
Query: 275 YTE 277
E
Sbjct: 190 TRE 192
>gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|424783006|ref|ZP_18209849.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|421959149|gb|EKU10760.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
showae CSUNSWCD]
Length = 196
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 20 DIYSRLLKDRIIMLSGEIEDGMASAIVAQMLFLEAEDPDKDIYLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T F+IYD M Y+KP + T+C+G A A LL GA+G R ALP+S IMI QP+G
Sbjct: 72 ITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSRIMIHQPLGGAR 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K L + AK+ G+ +I+ D R + S +EA EYG+IDKVL
Sbjct: 132 GQATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAEAKEYGLIDKVL 191
Query: 275 YTEKS 279
EKS
Sbjct: 192 --EKS 194
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 12/188 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AG KG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G+ E I+ D R + + EA EYG+ID V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEAKEYGLIDHVM 190
Query: 275 YTEKSPED 282
PED
Sbjct: 191 ----QPED 194
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 16 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQIYINSPG--------GS 67
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALPS+ IMI QP+G +
Sbjct: 68 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQ 127
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +K L L A+H G+ E+I D R + SP+EAVEYG+ID+V+
Sbjct: 128 GQAVDIEIQAQEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVEYGLIDRVV 187
Query: 275 YTEKSPEDHGVVSD 288
S D G+V++
Sbjct: 188 ---DSSGDGGIVTE 198
>gi|260768947|ref|ZP_05877881.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|375131469|ref|YP_004993569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
furnissii NCTC 11218]
gi|260616977|gb|EEX42162.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|315180643|gb|ADT87557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
furnissii NCTC 11218]
Length = 208
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+I ++P T+ + D+ S L K+R+++L + L++A+
Sbjct: 2 SYQEKNVMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + TLC+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTLCIGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L +L A H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLADHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AV+YG++D +L
Sbjct: 174 PLEVIERDTDRDNFMSAQQAVDYGLVDALL 203
>gi|152991609|ref|YP_001357330.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp.
NBC37-1]
gi|166214717|sp|A6Q675.1|CLPP_SULNB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151423470|dbj|BAF70973.1| ATP-dependent Clp protease, proteolytic subunit [Sulfurovum sp.
NBC37-1]
Length = 195
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V I+A+ L+L+ +D +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +++D M Y+KP I T+C+G A A LL +G KG R ALP + IMI QP G +
Sbjct: 71 ITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARIMIHQPSGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I +E++ +K L ++ A+ GKT ++IE D R + S EAVEYG+IDKVL
Sbjct: 131 GQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEAVEYGLIDKVL 190
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG S+ LI+A+ L+L ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAQEYGLIDQVI 188
>gi|456358638|dbj|BAM93083.1| ATP-dependent Clp protease proteolytic subunit [Agromonas
oligotrophica S58]
Length = 201
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M YVK P+ TLC+G A + LL AG G R ALP++++ + QP+G +
Sbjct: 75 VTSGLAMYDTMQYVKAPVHTLCMGTARSMGSFLLMAGEPGERTALPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQA+D+ I +EM+ K +++LYA+H G++ E +E + R + + EA+++G+ID+V
Sbjct: 135 GQASDIMIHAREMEQTKRRMIRLYAEHCGRSYEDVERTLDRDHFMTADEALQWGLIDRV 193
>gi|402815454|ref|ZP_10865046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402506494|gb|EJW17017.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 198
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V ++A+ L+LQ +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLQADDPEKDIFLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+CVG A +LLL AGA G R ALP+S IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIMIHQPLGGVR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I + + +L ++Y + G+ E+IE D R + S EA EYG++D+VL
Sbjct: 131 GQASDIKIHADWILKTRHKLNQIYVERTGQPIEKIERDTDRDNFMSADEAKEYGLVDQVL 190
Query: 275 Y 275
+
Sbjct: 191 H 191
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V L++A+ L+L ED EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M Y+KP + T+CVG A A+LLL AGAKG R ALP+S +MI QP+G +
Sbjct: 71 VTAGLGIYDTMQYIKPDVSTICVGIAASMASLLLTAGAKGKRYALPNSEVMIHQPLGGVR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D++I + K +L ++Y + G+ E+IE D R + S EA+ YG+IDKV+
Sbjct: 131 GQAADIKIHADWILKTKHKLNQIYVERTGQPYEKIERDTDRDFFMSAEEALAYGLIDKVI 190
>gi|401565794|ref|ZP_10806612.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
gi|400185000|gb|EJO19235.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC6]
Length = 203
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI QP+G +
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ + A+H G+ PE+I D R + S EA YG+ID+V+
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKAYGLIDEVV 191
Query: 275 YTEKS 279
K+
Sbjct: 192 TRPKT 196
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|417001079|ref|ZP_11940993.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|333975562|gb|EGL76441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella parvula ACS-068-V-Sch12]
Length = 197
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + IMI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL + A G+ E + D R + S +AVEYG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVL 189
Query: 275 YTE 277
E
Sbjct: 190 TRE 192
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + +K +L K+ ++ GK E I+ D+ R + EA EYG+ID V+
Sbjct: 131 GQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEAKEYGLIDDVI 190
Query: 275 YTEK 278
+ K
Sbjct: 191 TSRK 194
>gi|195051114|ref|XP_001993036.1| GH13604 [Drosophila grimshawi]
gi|193900095|gb|EDV98961.1| GH13604 [Drosophila grimshawi]
Length = 255
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 126/232 (54%), Gaps = 14/232 (6%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C ++P S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CSTQPLSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL AGA G R +LP++ IMI QP G +GQATD+ I +E+ +K +L +Y KH
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAQYDY 188
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE---DHGVVSDLKKAQLI 295
++ + + R + +P EA GIID VL E PE D G SD ++I
Sbjct: 189 AEMSSRMERDHFMTPEEAKVLGIIDHVL--EHPPETVSDSGPASDPPSGKII 238
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I MVI +S + D+ S L K+RI++LG + V L++A+ L+L+ ED +K
Sbjct: 2 PLIPMVIEQSS---RGERAYDIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T A+YD M Y+K I T+C+G A ALLL AGAKG
Sbjct: 59 DINFYINSPG--------GVVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP++ I+I QP+G +GQA+D+ I +E+ +K L + H GK +QI+ D
Sbjct: 111 KRYALPNARILIHQPMGGFQGQASDIAIQAREILRMKDTLNDILTFHTGKDLKQIQVDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA EYG+ID V+
Sbjct: 171 RDYFMSGKEAEEYGLIDHVI 190
>gi|5174419|ref|NP_006003.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Homo sapiens]
gi|3023512|sp|Q16740.1|CLPP_HUMAN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|62738031|pdb|1TG6|A Chain A, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738032|pdb|1TG6|B Chain B, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738033|pdb|1TG6|C Chain C, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738034|pdb|1TG6|D Chain D, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738035|pdb|1TG6|E Chain E, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738036|pdb|1TG6|F Chain F, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|62738037|pdb|1TG6|G Chain G, Crystallography And Mutagenesis Point To An Essential Role
For The N- Terminus Of Human Mitochondrial Clpp
gi|963048|emb|CAA90705.1| CLPP [Homo sapiens]
gi|12804197|gb|AAH02956.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|119589509|gb|EAW69103.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|123998295|gb|ABM86749.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
gi|157929068|gb|ABW03819.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
Length = 277
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L + RI++LG + I+A LYL +D KPI++YINS G G
Sbjct: 22 DIYTRLSQERIIFLGQEVTDGLANRIVAYLLYLDSDDSTKPIFIYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+K + T+CVG A A LL AG KG R ALP + IMI QP+G
Sbjct: 74 VTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKGKRLALPHARIMIHQPLGGTR 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE+ V+ +L ++ AK G+T E+I+ D R + S +EA EYG+ID+V+
Sbjct: 134 GQATDIQIEAKEILRVRQQLNEMLAKRTGQTLEKIQKDTDRDYFMSAAEAKEYGLIDQVI 193
>gi|238898003|ref|YP_002923683.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259585958|sp|C4K4P2.1|CLPP_HAMD5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229465761|gb|ACQ67535.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 215
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 8/217 (3%)
Query: 66 SFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFL 125
SF + R P +T+V T+ + D+ S + K R+++L + LI+A+ L
Sbjct: 3 SFDEQNTRLPSMTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQML 62
Query: 126 YLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 185
+L+ E+ EK IYLYINS G G T +IYD M ++ P + T+C+G A A
Sbjct: 63 FLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFITPDVSTICIGQACSMGA 114
Query: 186 LLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKT 245
LL AGAK R LP++ +MI QP+G +GQA+D+EI KE+ VK + L A H KT
Sbjct: 115 FLLAAGAKSKRYCLPNARVMIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKT 174
Query: 246 PEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPED 282
+ IE D R + S EA +YG++D VL K ++
Sbjct: 175 LKIIEKDTERDHFLSAEEAKKYGLVDCVLTERKDVKN 211
>gi|392342214|ref|XP_001055676.3| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Rattus norvegicus]
gi|392350502|ref|XP_217313.5| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Rattus norvegicus]
Length = 272
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C+G A A LL AGAKG R LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L + A H G+ +IE D R + S +EA EYG++D V+
Sbjct: 129 GQATDIEIQAKEILYHKRRLNEHLAAHTGQPLSRIEEDTERDFFMSAAEATEYGLVDLVI 188
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++ P S + +V TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 2 QNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLE 61
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E +K IYLYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 62 SESPDKDIYLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLL 113
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
GAKG R LP+S +MI QP+G +GQA+D+ I +E+ +K +L ++ A H G+ E
Sbjct: 114 AGGAKGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEV 173
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R + S +EA EYG++D VL
Sbjct: 174 IERDTDRDNFMSATEAAEYGLVDSVL 199
>gi|330814219|ref|YP_004358458.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487314|gb|AEA81719.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 204
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L V+ LI A+ L+L+ E+ K I++YINS G G
Sbjct: 28 DIYSRLLKERIIFLVGPINSQVSSLISAQLLFLESENNSKEIFMYINSPG--------GI 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T+ AIYD M Y+KP + TLC+G A + LL AG KG R +LP+S +M+ QP +
Sbjct: 80 VTDGLAIYDTMQYIKPAVATLCIGQACSMGSFLLAAGEKGQRMSLPNSRVMVHQPSAGFQ 139
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI E+ K +L ++Y+KH G++ E+I+ + R K+ S EA +G+IDKV+
Sbjct: 140 GQATDIEIHANEIMQTKKKLNEIYSKHTGQSVEKIKEALERDKFMSAEEAKAFGLIDKVV 199
Query: 275 YTEKSP 280
EK P
Sbjct: 200 --EKRP 203
>gi|23099911|ref|NP_693377.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
gi|60389793|sp|Q8ENM5.1|CLPP_OCEIH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22778142|dbj|BAC14412.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
Length = 193
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V+ I+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIYDTMNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEIMIHQPLGGTQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + ++K + ++ A+ G+ E IE D R + + ++VEYG+IDK+L
Sbjct: 131 GQATDIEIHAKRIIDIKRRMNEIMAEKTGQPIEVIERDTERDNFMTADQSVEYGLIDKIL 190
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ LYL ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 129 GQATDIEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEAREYGLIDQVI 188
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LYINS G G
Sbjct: 57 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG--------GS 108
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL GA+G R ALPS+ IMI QP+G +
Sbjct: 109 VTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQ 168
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K+ L L A+H G+ E+IE D R + SP EA YG+ID+VL
Sbjct: 169 GQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 228
>gi|406942781|gb|EKD74936.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 211
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Query: 78 TMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
T+V +A + D+ S L K R+++L ++ L++A+ L+L+ E+ +K I+
Sbjct: 11 TLVPMVVEQSARGERAYDIYSRLLKERVIFLIGPIEDNMANLVVAQLLFLESENPDKDIH 70
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T A AIYD M ++KP + TLC+G A ALLL GAKG R
Sbjct: 71 LYINSPG--------GAVTSALAIYDTMQFIKPDVSTLCIGQAASAGALLLCGGAKGKRY 122
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
LP S +MI QP+G +GQATD+EI +EM ++ +L + A H G+TP+QI D R
Sbjct: 123 CLPHSRMMIHQPLGGYQGQATDIEIHTREMLLLREKLTTIIAYHTGRTPQQIMLDTDRDY 182
Query: 258 YFSPSEAVEYGIIDKVLYTEKSPEDHGVVSD 288
+ EA +YG+ID +L EK E V ++
Sbjct: 183 FMGGKEAKDYGLIDAIL--EKRVEKKSVETN 211
>gi|339499730|ref|YP_004697765.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
caldaria DSM 7334]
gi|338834079|gb|AEJ19257.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
caldaria DSM 7334]
Length = 204
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L +L++A+ L+L+ +D EK I LYINS G G
Sbjct: 24 DIYSRLLKDRIIFLDGEINDVTADLVVAQMLFLEGQDPEKDISLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+C+G A AAL+L AG G R ALPSS I+I QP G +
Sbjct: 76 VTAGLAIYDTMQYIKCAVQTICLGQAASMAALILAAGTAGKRFALPSSRILIHQPWGGAQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+ I KE+ +K ++ +AKH GKT QI D+ R + S +AV YG+ DK+L
Sbjct: 136 GQAKDIGIQAKEIGRLKKLTIEYFAKHTGKTEAQIAQDMERDFFMSAQDAVAYGVADKIL 195
Query: 275 YTEKSPEDHGVVS 287
EK HG S
Sbjct: 196 TREK----HGTAS 204
>gi|303275766|ref|XP_003057177.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461529|gb|EEH58822.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 372
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKLGYETEAFAIY 162
RIVY+GM +P+VTEL++AE L+L YE E+P Y+YI+S G+ + GE +G +TEA+AI
Sbjct: 163 RIVYIGMPLLPAVTELVVAELLFLNYEQNERPGYMYIHSGGSINEKGEVVGIDTEAYAIL 222
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IGRIEGQATDVE 221
D M Y+KP + T+ VG +G AA+LL AG G R ALP++ IM P + R A +V+
Sbjct: 223 DTMRYIKPKMHTVAVGKCFGNAAMLLAAGHPGCRHALPNAQIMTHPPKLNRTFDTAVNVQ 282
Query: 222 IARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
I E+ + + ++ GK E++ D+ R +YF+P +A+EYG+ID+++
Sbjct: 283 IRANEIDVCEDTYMGFMSEFSGKPQEEVTRDLDRRRYFTPKQAIEYGLIDRII 335
>gi|325983082|ref|YP_004295484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
gi|325532601|gb|ADZ27322.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
Length = 213
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 119/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MVI TSG + D+ S L K R+V+L + L++A+FL+L+ E+ EK
Sbjct: 18 LIPMVIE-TSGRG--ERAYDIYSRLLKERVVFLVGPVTEASANLVVAQFLFLESENSEKD 74
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+ YINS G G + A+YD M Y+KP + TLC+G A ALLL AGAKG
Sbjct: 75 IFFYINSPG--------GMVSAGLAVYDTMQYIKPDVSTLCIGQAASMGALLLTAGAKGK 126
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R LP+S +MI QP+G +GQA+D+EI +E+ +K+ L ++ AKH + +E D R
Sbjct: 127 RYCLPNSRVMIHQPLGGFQGQASDIEIHAREILYLKSRLNEIMAKHTERPVSDLEKDTDR 186
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S +E+V YG++D VL
Sbjct: 187 DNFMSATESVNYGLVDAVL 205
>gi|428211847|ref|YP_007084991.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428000228|gb|AFY81071.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 234
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L + RIV+LG +V +LI+A+ L+L ED EK I LYINS G G
Sbjct: 47 DLYSRLLRERIVFLGTPVDDNVADLIVAQMLFLDAEDPEKDIQLYINSPG--------GS 98
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++P + T+C G A A LL AGAKG R +LPSS IMI QP+G +
Sbjct: 99 VTAGMAIYDTMQQIRPDVATICYGLAASMGAFLLTAGAKGKRMSLPSSRIMIHQPLGGAQ 158
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ K +L ++ A H G+ E+IEAD R + S E+ YG+ID+V+
Sbjct: 159 GQAVDIEIQAKEILYHKRQLNEMLAFHTGQPLERIEADTDRDFFMSAEESRAYGLIDQVI 218
Query: 275 YTEKSPEDHGVVSDLK 290
+ P+ V+ K
Sbjct: 219 TKQGLPKSGEAVTAQK 234
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 122/207 (58%), Gaps = 11/207 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MV+ TS + D+ S L K+RI++LG + V L++A+ L+L+ ED +
Sbjct: 2 SVLVPMVVEQTS---RGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPD 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I+LYINS G G + AI+D M Y++P + T+CVG A A LL AGAK
Sbjct: 59 KDIHLYINSPG--------GSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAK 110
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R ALP+S IMI QP+G +GQA D+EI K + ++ L ++ ++ GK EQI D
Sbjct: 111 GKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDT 170
Query: 254 RRPKYFSPSEAVEYGIIDKVLYTEKSP 280
R + + EA EYG+ID+V+ + P
Sbjct: 171 DRDHFMTAREAREYGLIDEVITKRELP 197
>gi|57238933|ref|YP_180069.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58578866|ref|YP_197078.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|67460160|sp|Q5HBX5.1|CLPP_EHRRW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57161012|emb|CAH57918.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417492|emb|CAI26696.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 198
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 116/198 (58%), Gaps = 8/198 (4%)
Query: 77 ITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPI 136
+T+V T+ + D+ S L K RI+++ + L++A+ ++L+ E+ EK I
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDI 60
Query: 137 YLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNR 196
+YINS G G T +IYD M YVKP I TLC+G A +LLL AG KG R
Sbjct: 61 SMYINSPG--------GVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMR 112
Query: 197 AALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRP 256
ALP+S IMI QP G +GQATD+EI KE+ N+K+ L +Y KH G+ ++ A + R
Sbjct: 113 CALPNSRIMIHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERD 172
Query: 257 KYFSPSEAVEYGIIDKVL 274
+ S A ++GIIDKV+
Sbjct: 173 NFMSADSAQDFGIIDKVI 190
>gi|307722032|ref|YP_003893172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
gi|306980125|gb|ADN10160.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
Length = 196
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L +V I+A+FL+L+ ED EK IY YINS G G
Sbjct: 19 DIYSRLLKDRIVMLSGEVNDAVASTIVAQFLFLEAEDPEKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y++P + T+C+G A A LL G KG R ALP + IMI QP+G +
Sbjct: 71 VTAGLAIFDTMNYIRPHVATICIGQAASMGAFLLSCGEKGKRYALPHARIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K EL + AK+ G+ + IEAD R + S +EA +YG+ID+VL
Sbjct: 131 GQATDIAIQAEEILRMKKELNGILAKNTGQNIKTIEADTDRDNFMSAAEAKDYGMIDEVL 190
>gi|114674891|ref|XP_512312.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pan troglodytes]
gi|410224542|gb|JAA09490.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
gi|410267064|gb|JAA21498.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
gi|410337167|gb|JAA37530.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Pan troglodytes]
Length = 277
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 110/184 (59%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + +K +L K+ ++ GK E I+ D+ R + EA EYG+ID V+
Sbjct: 131 GQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEAKEYGLIDDVI 190
Query: 275 YTEK 278
+ K
Sbjct: 191 TSRK 194
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ F S S V+ MV+ + + D+ S L + RIV+LG V + I+A+
Sbjct: 15 NDFDVSSSPSNVVPMVL---EQSGMGERAFDIYSRLLRERIVFLGTPVTDEVADSIVAQL 71
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
LYL ED EK + +YINS G G T AIYD M ++P + T+C G A
Sbjct: 72 LYLDAEDPEKDVQMYINSPG--------GSVTAGMAIYDTMQQIRPDVVTICYGLAASMG 123
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGA G R +LPSS IMI QP+G +GQA D+EI KE+ K +L +L A H G+
Sbjct: 124 AFLLTAGAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQ 183
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
E++EAD R + S EA YG++D+V+ E P
Sbjct: 184 PIEKLEADTERDFFMSAEEAKNYGLVDRVIAKENLP 219
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 114/183 (62%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|291277236|ref|YP_003517008.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
gi|290964430|emb|CBG40280.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
Length = 195
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L V I+A+ L+L+ ED +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDMVASSIVAQLLFLEAEDAQKDIYFYINSPG--------GA 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AF+IYD M Y++P + T+CVG A ALLL +GAKG R +LP+S IMI QP+G +
Sbjct: 71 VTSAFSIYDTMHYIRPDVATICVGQAASAGALLLSSGAKGKRYSLPNSRIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI E+ +K L ++ A + G++ +++ D R + S EA +YG++DKVL
Sbjct: 131 GQATDIEIQANEILRLKKILNEILASNTGQSLKKVSQDTERDFFMSAMEAQKYGLVDKVL 190
Query: 275 YTEKS 279
EKS
Sbjct: 191 --EKS 193
>gi|426229089|ref|XP_004008625.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Ovis aries]
Length = 272
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V I+A+ L+L +D EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M ++KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ISAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI + + ++ L K+ A+ G+ E++E D R + S EA +YG++DKVL
Sbjct: 131 GQATDIEIRARRILKMRDNLNKILAERTGQPLERVERDTDRDYFMSAQEAFDYGLVDKVL 190
Query: 275 YTE 277
E
Sbjct: 191 GKE 193
>gi|398378134|ref|ZP_10536301.1| protease subunit of ATP-dependent protease [Rhizobium sp. AP16]
gi|397725592|gb|EJK86041.1| protease subunit of ATP-dependent protease [Rhizobium sp. AP16]
Length = 207
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ KPI LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENSRKPISLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y++ P+ TLC+G A + LL AG G R+ALP+S+I I QP+G +
Sbjct: 75 VTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGQAGERSALPNSSIHIHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I EM+ K + +LYA+H G+T E+ E + R + + +A+E+G+ID++L
Sbjct: 135 GQASDMLIHAAEMERTKHRMTRLYAEHCGRTYEEFERAMDRDHFMTAEQALEWGLIDRIL 194
>gi|351713501|gb|EHB16420.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Heterocephalus glaber]
Length = 272
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + +V L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDTVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 122 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|417001829|ref|ZP_11941334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479715|gb|EGC82805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++++I+A+ L+L+ ED +K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R +LPSS IMI QP G +
Sbjct: 75 VTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFSLPSSNIMIHQPSGGAQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +++ +K L K+ + + G++ ++IE D R S +EA+EYG+IDKV+
Sbjct: 135 GQASDIVIQAEQIIKIKERLNKILSDNTGQSLKKIEKDTDRDFAMSAAEALEYGLIDKVI 194
>gi|440901057|gb|ELR52057.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Bos grunniens mutus]
Length = 280
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 78 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 129
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 130 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 189
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 190 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 249
Query: 275 YTEKSPED 282
P+D
Sbjct: 250 V--HPPQD 255
>gi|404496730|ref|YP_006720836.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|418065321|ref|ZP_12702695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
gi|90101408|sp|Q39UH2.1|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
gi|373562499|gb|EHP88710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
metallireducens RCH3]
Length = 199
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A ALLL G KG R
Sbjct: 61 LYINSPG--------GVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L S IMI QP+G +GQATD+ I +E+ +K L ++ A++ G+ E++EAD R
Sbjct: 113 SLTHSRIMIHQPLGGFQGQATDIHIHAQEILKMKKRLNEIIAENSGQALEKVEADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S EA YGIID ++
Sbjct: 173 FMSGEEAKSYGIIDAII 189
>gi|397497151|ref|XP_003819379.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pan paniscus]
Length = 277
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 74 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 125
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 126 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 185
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 186 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 245
Query: 275 YTEKSPED 282
P+D
Sbjct: 246 V--HPPQD 251
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 115/190 (60%), Gaps = 9/190 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L ED EK I LYINS G G
Sbjct: 18 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI QP+G +
Sbjct: 70 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + ++ +L K+ A+ G+ E IE D R + S EA+EYG+IDK+L
Sbjct: 130 GQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 189
Query: 275 -YTEKSPEDH 283
+TE H
Sbjct: 190 THTEDKKHHH 199
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V ++A+ L+L+ ED +K I+LYINS G G
Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPG--------GV 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG+A A+LL AG KG R ALP + +MI QP+G ++
Sbjct: 70 VTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARVMIHQPLGGVQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+++EI +E+ ++ EL + A G+ E + D R + S +AVEYG+ID+VL
Sbjct: 130 GQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVEYGLIDEVL 189
Query: 275 YTE 277
E
Sbjct: 190 TRE 192
>gi|194761774|ref|XP_001963100.1| GF15771 [Drosophila ananassae]
gi|190616797|gb|EDV32321.1| GF15771 [Drosophila ananassae]
Length = 252
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 111/187 (59%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L + ++ ++A+ L+LQ E+V KPI+LYINS G G
Sbjct: 45 DIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYINSPG--------GV 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPPI T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 97 VTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQPSGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +Y KH + +++ + + R + +P EA GIID VL
Sbjct: 157 GQATDILIHAEEIIKIKRQLTSIYVKHAKNSYDEMCSRMERDHFMTPEEAKTLGIIDHVL 216
Query: 275 YTEKSPE 281
E PE
Sbjct: 217 --EHPPE 221
>gi|226939792|ref|YP_002794865.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
gi|254763792|sp|C1D539.1|CLPP_LARHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226714718|gb|ACO73856.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
Length = 212
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV++ L++A+ L+L+ E+ +K I+LYINS G G
Sbjct: 35 DIYSRLLKERIVFMVGPVTDETANLVVAQMLFLESENPDKDIHLYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + TLC+G A A LL AGAKG R ALP+S +MI QP+G +
Sbjct: 87 VTAGLSIYDTMNFIKPSVSTLCIGQAASMGAFLLSAGAKGKRFALPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D EI +E+ +K +L +L A H G+ E +E D R + + ++A+EYG+ID+VL
Sbjct: 147 GQASDFEIHAREILTLKRKLNELMAAHCGRPLEDLERDTDRDNFMNAAQALEYGLIDQVL 206
>gi|195434156|ref|XP_002065069.1| GK15263 [Drosophila willistoni]
gi|194161154|gb|EDW76055.1| GK15263 [Drosophila willistoni]
Length = 255
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 14/225 (6%)
Query: 68 CKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
C S+ S +IP T + D+ S L K RI+ L + ++ ++A+ L+
Sbjct: 17 CASRANSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E+V KPI+LYINS G G T AIYD M YVKPPI T CVG A +L
Sbjct: 77 LQSENVNKPIHLYINSPG--------GVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSL 128
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL AGA G R +LP++ IMI QP G +GQATD+ I +E+ +K +L +Y KH +
Sbjct: 129 LLAAGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTAIYVKHAKNSY 188
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE---DHGVVSD 288
+++ + R + +P EA GIID VL E PE D G SD
Sbjct: 189 DEMCQRMERDHFMTPEEAKTLGIIDHVL--EHPPETVSDSGPSSD 231
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + +V LI+A+ LYL ED EK IY+YINS G G
Sbjct: 17 DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AG KG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L + A H G+ E+I D R + SP EA YGIID+V+
Sbjct: 129 GQATDIEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFFMSPEEAKNYGIIDEVI 188
>gi|410950139|ref|XP_003981769.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Felis catus]
Length = 273
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|355755362|gb|EHH59109.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Macaca fascicularis]
Length = 238
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 35 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG+ G R +LP+S IMI QP G
Sbjct: 87 VTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGAR 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 147 GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 206
>gi|73987256|ref|XP_854538.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Canis lupus familiaris]
Length = 273
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++G S +V L +A+ LYL+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL AG +G R ALP+S IMI QP G ++
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRIMIHQPWGGVQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G+A D+E KE+ ++ L ++ A H ++ E+IE D R + S EA+EYG+ID+V+
Sbjct: 131 GKAVDIETHAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEALEYGLIDEVI 190
Query: 275 YTEK 278
+ K
Sbjct: 191 HKRK 194
>gi|393199477|ref|YP_006461319.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|406666669|ref|ZP_11074434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
gi|327438808|dbj|BAK15173.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
gi|405385439|gb|EKB44873.1| ATP-dependent Clp protease proteolytic subunit [Bacillus isronensis
B3W22]
Length = 196
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 113/179 (63%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIILLGSGIDDNVANSIVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AGAKG R +LP++ +MI QP+G +
Sbjct: 71 ITSGMAIYDTMNFIKPDVSTICIGMAASMGAFLLSAGAKGKRVSLPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQAT++EIA K + +++ +L ++ A++ G+ E + D R + S +A+EYG+IDK+
Sbjct: 131 GQATEIEIAAKRILHLREKLNRIMAENSGQDYETLARDTDRDNFMSAEQALEYGLIDKI 189
>gi|434402424|ref|YP_007145309.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428256679|gb|AFZ22629.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 232
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V I+A+ L+L ED EK I LYINS G G
Sbjct: 45 DIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDAEDSEKDIQLYINSPG--------GS 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M ++P + T+C G A A LL AGA G R +LP S IMI QP+G +
Sbjct: 97 VYAGMAIYDTMQQIRPNVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +KA+L +L A+H G+ E+IEAD R + S EA YG+ID+V+
Sbjct: 157 GQAIDIEIQAREILYIKAKLNQLLAQHTGQALEKIEADTERDFFMSAEEAKNYGLIDQVI 216
Query: 275 YTEKSP 280
+ P
Sbjct: 217 SRQNIP 222
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG V +++A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A A LL GA G R A+P++ IMI QP+G +
Sbjct: 73 VTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +KA+L + AKH + E+IE D R + EA EYG+ID+V+
Sbjct: 133 GQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEYGLIDEVI 192
>gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + +V I+A+ L+L ED EK + LYINS G G
Sbjct: 50 DIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPG--------GS 101
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD + ++P + T+C G A A LL AG G R +LP S IMI QP+G +
Sbjct: 102 VYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQ 161
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +KA L +L +KH G+ E+IEAD R + SP EA +YG+ID+V+
Sbjct: 162 GQAIDIEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVI 221
Query: 275 YTEKSPEDHGVVSDLK 290
+ P V+ +K
Sbjct: 222 SRQNLPSSGAPVTIVK 237
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125.1|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6.1|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LYINS G G
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG--------GS 104
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL GA+G R ALPS+ IMI QP+G +
Sbjct: 105 VTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQ 164
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K+ L L A+H G+ E+IE D R + SP EA YG+ID+VL
Sbjct: 165 GQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224
>gi|268592036|ref|ZP_06126257.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|422010033|ref|ZP_16357015.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
gi|291312428|gb|EFE52881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|414092206|gb|EKT53885.1| ATP-dependent Clp protease proteolytic subunit [Providencia
rettgeri Dmel1]
Length = 206
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + LI+A+ L+L+ E+ EK I+LYINS G G
Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYINSPG--------GV 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M ++KP + T+C+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 84 ITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRVMIHQPLGGYQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQA+D+EI +E+ VK+ + +L A H GK+ E+I D R ++ S +EA EYG++D++
Sbjct: 144 GQASDIEIHAQEILKVKSRMNELMALHTGKSIEEITRDTERDRFLSANEAKEYGLVDQI 202
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V LI+A+ L+L+ ED +K I+ Y+N+ G G+
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPG--------GH 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M Y+KPP+ T+CVG A ALLL AG +G R+ALP S I+I QP+G +
Sbjct: 71 ISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K EL + A + ++I+ D R Y + +A EYGIID+++
Sbjct: 131 GQATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQAKEYGIIDEII 190
>gi|298531141|ref|ZP_07018542.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
gi|298509164|gb|EFI33069.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
Length = 213
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++G+ + L+ A+ L+L+ E E I LYINS G G
Sbjct: 19 DIFSRLLKDRIIFIGVPVDDQLANLVCAQLLFLESESSEMEINLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + Y+ P+ TLC+G A ALLL AG KG R ALP S I+I QP+G +
Sbjct: 71 VTAGMAIYDSIQYISAPVATLCMGQASSMGALLLAAGQKGMRYALPHSRILIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D++I +E+ +K E+ + A H GK +E D+ R + P+EA EYGIID VL
Sbjct: 131 GQAADIDIHAREIIRIKQEINAIMAHHTGKDMATVEHDMDRDYFMGPAEAKEYGIIDHVL 190
Query: 275 YTEKSPE 281
T E
Sbjct: 191 TTRAGLE 197
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ + L + RI++LG + I+A LYL +D KPIYLYINS G G
Sbjct: 22 DIYTRLGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPNKPIYLYINSPG--------GS 73
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+C+G A + LL AG KG R ALP+S IMI QP+G
Sbjct: 74 VTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKGKRLALPNSRIMIHQPMGGTR 133
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI E+ V++EL + A+ G++ E+IE D R Y S EA EYG+ID+V+
Sbjct: 134 GQATDIEIEANEILRVRSELNNMLAERTGQSLEKIEKDTDRDYYMSAEEAKEYGLIDQVI 193
>gi|114051824|ref|NP_001039879.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Bos taurus]
gi|118572228|sp|Q2KHU4.1|CLPP_BOVIN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|86826474|gb|AAI12881.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Bos taurus]
gi|296485755|tpg|DAA27870.1| TPA: caseinolytic peptidase, ATP-dependent, proteolytic subunit
precursor [Bos taurus]
Length = 272
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 112/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GV 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|258621302|ref|ZP_05716336.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|258625374|ref|ZP_05720271.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|262166052|ref|ZP_06033789.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
gi|262171083|ref|ZP_06038761.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|424807155|ref|ZP_18232563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
mimicus SX-4]
gi|449144449|ref|ZP_21775264.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus CAIM
602]
gi|258582365|gb|EEW07217.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|258586690|gb|EEW11405.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|261892159|gb|EEY38145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|262025768|gb|EEY44436.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
gi|342325097|gb|EGU20877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
mimicus SX-4]
gi|449079950|gb|EMB50869.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus CAIM
602]
Length = 208
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I KE+ +K +L +L A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKNKLNRLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|241888864|ref|ZP_04776170.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
gi|241864540|gb|EER68916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
Length = 215
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D EK IY YINS G
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M ++K + T+C+G A A LL AG G R ALP++ +MI
Sbjct: 69 ------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEVMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQAT++EIA + + + +L K+ A G+T + IE D R Y + EA E
Sbjct: 123 HQPLGGAQGQATEIEIAARHILRTREKLNKILADRTGQTIKTIERDTERDNYLTAEEACE 182
Query: 267 YGIIDKVLYTEKS 279
YG++DKV+Y E +
Sbjct: 183 YGLVDKVMYPENN 195
>gi|365838987|ref|ZP_09380240.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
gi|364566008|gb|EHM43714.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaeroglobus geminatus F0357]
Length = 202
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L +V I+A+ L+L+ ++ +K I+LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLTGGIDDTVANSIIAQLLFLEADNPDKDIHLYINSPG--------GV 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y+KP + T+CVG+A A++LL AG KG R ALP S +MI QP+G ++
Sbjct: 73 VTAGMAVYDTMQYIKPDVSTICVGSAASMASVLLTAGTKGKRFALPHSQVMIHQPLGGVQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++ EL + A H G+ E IE D R + + EA YG++D++L
Sbjct: 133 GQATDIEIHAREILRMRKELNGILASHTGRPIEVIEKDTERDNFMTAEEAKAYGLVDEIL 192
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ ++D M ++P + T+C+G A A LL AGAKG R +LP+S IMI QP+G +
Sbjct: 69 VSAGMGMFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L + A H G+ +IE D R + S E+ EYG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKQKLNQHLADHTGQPLSKIEEDTERDFFMSAEESKEYGLIDQVI 188
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V + I+A+ L+L+ ED EK I LYINS G G
Sbjct: 115 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPG--------GS 166
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL GA+G R ALPS+ IMI QP+G +
Sbjct: 167 VTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQ 226
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K+ L L A+H G+ E+IE D R + SP EA YG+ID+VL
Sbjct: 227 GQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 286
>gi|348517837|ref|XP_003446439.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Oreochromis niloticus]
Length = 270
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 15/213 (7%)
Query: 62 LNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELIL 121
++ S C R+P+I +V+ T + D+ S L + RI+ + S+ L++
Sbjct: 20 IHHSSIC----RTPLIPIVV---EQTGRGERAYDIYSRLLRERIICVMGPIDDSIASLVI 72
Query: 122 AEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAW 181
A+ L+LQ E KPI++YINS G G T AIYD M Y+ PI T CVG A
Sbjct: 73 AQLLFLQSESNNKPIHMYINSPG--------GVVTAGLAIYDTMQYILNPISTWCVGQAA 124
Query: 182 GEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKH 241
+LLL AG G R +LP++ IM+ QP G GQATD+ I +E+ +K ++ +YAKH
Sbjct: 125 SMGSLLLAAGTTGMRHSLPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYAKH 184
Query: 242 FGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G++ E IE+ + R +Y SP EA ++G+ID+VL
Sbjct: 185 TGQSLETIESVMERDRYMSPMEAQDFGLIDRVL 217
>gi|381169038|ref|ZP_09878213.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Phaeospirillum molischianum DSM 120]
gi|380681827|emb|CCG43035.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Phaeospirillum molischianum DSM 120]
Length = 214
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+L V LI A+FL+L+ E+ K I YINS G G
Sbjct: 30 DIYSRLLKERIVFLTGQVHDEVACLICAQFLFLESENPTKDIAFYINSPG--------GV 81
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++P + T+C+G A +LLL AGAKG R +LP+S IM+ QP G +
Sbjct: 82 VTSGLAIYDTMQYIRPAVSTVCIGQAASMGSLLLTAGAKGKRLSLPNSRIMVHQPSGGAQ 141
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++A L +Y H G+ E IE + R K+ + EA E+G+ID V+
Sbjct: 142 GQATDIEIQAREILALRARLNNIYVDHTGQPLEVIERVMERDKFMTADEAREFGLIDDVV 201
Query: 275 YTEKSPEDHG 284
PE G
Sbjct: 202 NKRSLPEGDG 211
>gi|367478010|ref|ZP_09477333.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
gi|365269693|emb|CCD89801.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 285]
Length = 205
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M +VK P+ T+C+G A + LL AG KG R ALP++++ + QP+G +
Sbjct: 75 ITSGLAMYDTMQFVKAPVHTVCMGTARSMGSFLLMAGEKGERTALPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +++LYA+H G++ E +E + R + + EA+++G+ID+V+
Sbjct: 135 GQASDILIHAREMEQTKRRVIRLYAEHCGRSYEDVERTLDRDHFMTAEEALDWGLIDRVV 194
>gi|323498276|ref|ZP_08103278.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis
DSM 21326]
gi|323316704|gb|EGA69713.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis
DSM 21326]
Length = 208
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + + +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMAADQAVEYGLVDAVL 203
>gi|156362486|ref|XP_001625808.1| predicted protein [Nematostella vectensis]
gi|156212658|gb|EDO33708.1| predicted protein [Nematostella vectensis]
Length = 228
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 115/208 (55%), Gaps = 11/208 (5%)
Query: 67 FCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLY 126
F S R ++ MVI T + D+ S L K RIV + + L++A+ L+
Sbjct: 18 FHTSCVRRFLVPMVI---ESTGRGERAYDIFSRLLKERIVCVMGPVTDETSSLVIAQLLF 74
Query: 127 LQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 186
LQ E + PI++YINS G G T IYD M Y++PPI T CVG A +L
Sbjct: 75 LQSESSKLPIHMYINSPG--------GTVTSGLGIYDTMQYIQPPISTWCVGQACSMGSL 126
Query: 187 LLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTP 246
LL AG+ G R ALP S IM+ QP G GQATD+ I +E+ +K L +Y KH GK
Sbjct: 127 LLAAGSPGLRHALPHSRIMVHQPHGGASGQATDIAIQAEEILKLKRVLNGIYVKHTGKDM 186
Query: 247 EQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE + R K+ SP EA E+G+ID+VL
Sbjct: 187 ETIEQALERDKFMSPEEAKEFGLIDRVL 214
>gi|420245135|ref|ZP_14748803.1| protease subunit of ATP-dependent protease [Rhizobium sp. CF080]
gi|398049111|gb|EJL41553.1| protease subunit of ATP-dependent protease [Rhizobium sp. CF080]
Length = 202
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L SV+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDSVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y+ P+ TLC+G A + LL +G +G R ALP+++I I QP+G +
Sbjct: 75 VTSGLAMYDTMRYIHAPVHTLCMGTARSMGSFLLMSGQRGERTALPNASIHIHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G++ E E + R ++ + EA+E+G+ID++L
Sbjct: 135 GQASDMLIHAEEMQKTKHRMTRLYAEHCGRSYEDFERAMDRDRFMTAEEALEWGLIDRIL 194
>gi|187776850|ref|ZP_02993323.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC
15579]
gi|424826849|ref|ZP_18251700.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
gi|187775509|gb|EDU39311.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sporogenes ATCC 15579]
gi|365980550|gb|EHN16576.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
sporogenes PA 3679]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + LI+A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S +MI QP+G
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + + +K +L + + GK EQ+E D R + S EA EYG+ID+V+
Sbjct: 131 GQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
Query: 275 YTEK 278
+K
Sbjct: 191 DKKK 194
>gi|334121380|ref|ZP_08495450.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333455094|gb|EGK83755.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 202
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG + LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRDRIVFLGQQVDSDLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P I T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNHIRPDICTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L + A H G+ +IE D R + S EA +YG++D+V+
Sbjct: 129 GQATDIEIQAKEILYHKRRLNEHLANHTGQPLSRIEEDTERDFFMSAEEAKDYGLVDQVI 188
>gi|336124548|ref|YP_004566596.1| ClpP [Vibrio anguillarum 775]
gi|365538382|ref|ZP_09363557.1| ATP-dependent Clp protease proteolytic subunit [Vibrio ordalii ATCC
33509]
gi|335342271|gb|AEH33554.1| ClpP [Vibrio anguillarum 775]
Length = 208
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YV+ P+ TLCVG A A+LL AG +G R ALP + IMI QP G +
Sbjct: 71 VTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMIHQPWGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ ++ L + A H G+T E+I D R + EA +YGI+D ++
Sbjct: 131 GQATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKKYGIVDDIV 190
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R+V+L LI+A+ L+L+ E+ +K IY YINS G G
Sbjct: 35 DIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDIYFYINSPG--------GS 86
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + TLC+G A A LL AG KG R LP+S +MI QP+G +
Sbjct: 87 VTAGMAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFILPNSRVMIHQPLGGFQ 146
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI +E+ +++ L + +KH G+ E+IE D R + S + AVEYG++DKVL
Sbjct: 147 GQASDIEIHAREILYLRSRLNDMLSKHTGQALERIEKDTDRDNFMSATAAVEYGLVDKVL 206
>gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 236
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + +V I+A+ L+L ED EK + LYINS G G
Sbjct: 49 DIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDVQLYINSPG--------GS 100
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD + ++P + T+C G A A LL AG G R +LP S IMI QP+G +
Sbjct: 101 VYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRIMIHQPLGGAQ 160
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +KA L +L +KH G+ E+IEAD R + SP EA +YG+ID+V+
Sbjct: 161 GQAIDIEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEAKDYGLIDQVI 220
Query: 275 YTEKSPEDHGVVSDLK 290
+ P V+ +K
Sbjct: 221 SRQNLPSSGAPVTIVK 236
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|409912312|ref|YP_006890777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
gi|60389697|sp|Q74C82.1|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 79 MVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIY 137
M++P T + D+ S L K+RI++LG V L++A+ L+L+ ED +K I+
Sbjct: 1 MLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIH 60
Query: 138 LYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRA 197
LYINS G G T AIYD M Y+K P+ T+CVG A ALLL G KG R
Sbjct: 61 LYINSPG--------GVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRF 112
Query: 198 ALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPK 257
+L S IMI QP+G +GQATD+ I +E+ +K L ++ A++ G+ ++EAD R
Sbjct: 113 SLKHSRIMIHQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENTGQQLAKVEADTERDY 172
Query: 258 YFSPSEAVEYGIIDKVL 274
+ S +EA +YGIID ++
Sbjct: 173 FMSGAEAKDYGIIDNII 189
>gi|388501690|gb|AFK38911.1| unknown [Lotus japonicus]
Length = 91
Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/91 (76%), Positives = 80/91 (87%)
Query: 205 MIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEA 264
M++QPI R +GQATDV +AR+E+ NVK ELVKLYAKH K+PEQIEADI+RPKYFSPSEA
Sbjct: 1 MMRQPIARFQGQATDVNLARREVNNVKTELVKLYAKHIEKSPEQIEADIQRPKYFSPSEA 60
Query: 265 VEYGIIDKVLYTEKSPEDHGVVSDLKKAQLI 295
VEYGIIDKVLY E+ DHGVVSDLK+AQLI
Sbjct: 61 VEYGIIDKVLYNERGTADHGVVSDLKRAQLI 91
>gi|409990366|ref|ZP_11273750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|291567407|dbj|BAI89679.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938772|gb|EKN80052.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 200
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ +K +L + AKH + +IE D R + S +AV YG+ID+V+
Sbjct: 129 GQATDIEIQAREILYLKRQLNENLAKHTSQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +Y+NS G G
Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 93 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ +I D R + SP+EAVEYG+ID+V+
Sbjct: 153 GQAVDIEIQAKEILFLKETLNGLMAEHTGQPLAKISEDTDRDYFLSPAEAVEYGLIDRVV 212
Query: 275 YTEKSPEDHGVVSD 288
S D G+V+D
Sbjct: 213 ---DSSGDGGIVTD 223
>gi|399888212|ref|ZP_10774089.1| ATP-dependent Clp protease proteolytic subunit [Clostridium arbusti
SL206]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG + LI+A+ L+L+ ED +K I LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGEDVNDTTASLIVAQLLFLESEDPDKDISLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 71 ITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + + N+K +L + ++ G+ E IE D R + EA EYG+ID+V+
Sbjct: 131 GQATDIGIHAERILNIKKKLNSILSERSGQPLEVIERDTERDNFLEAIEAKEYGLIDEVI 190
Query: 275 YTEK 278
+K
Sbjct: 191 TKKK 194
>gi|27904898|ref|NP_778024.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|31076632|sp|Q89AA1.1|CLPP_BUCBP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27904296|gb|AAO27129.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 205
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 11/201 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S +I MVI TS + + D+ S L K RI++L + + LI+A+ L+L+ E+ +
Sbjct: 12 SLLIPMVIEKTS---YGERSYDIYSRLLKERIIFLTGTIDDNTANLIVAQMLFLEAENAK 68
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
+ IY+YINS G G T +IYD M ++KP + T+C+G A AAL+L AG K
Sbjct: 69 QDIYIYINSPG--------GVITAGMSIYDTMKFIKPNVNTICIGQACSMAALILTAGKK 120
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R LP+S IMI QPIG GQA+D+EI KE+ VK +L +L A H ++ IE D
Sbjct: 121 GYRYCLPNSRIMIHQPIGGYNGQASDIEIHAKEIIKVKRKLNELMAFHTSQSINTIEKDT 180
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R + S ++A++YG+ID +L
Sbjct: 181 ERDCFLSANQAIKYGLIDTIL 201
>gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P + ++ MV+ TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 6 TDPLNALVPMVV---EQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I++YINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 63 ENPEKDIFIYINSPG--------GSVTAGMAIYDTMNFIKPNVSTVCMGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
G KG R LP+S +MI QP+G +GQA+D EI +E+ ++K +L +L A+H G+ E I
Sbjct: 115 GGTKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAREILSIKDKLNRLLAEHTGQPIEVI 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
D R + S ++AVEYGI+D VL
Sbjct: 175 SRDTDRDNFMSGAQAVEYGIVDAVL 199
>gi|424033222|ref|ZP_17772637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-01]
gi|408874956|gb|EKM14118.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HENC-01]
Length = 200
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP+I ++P T+ + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 2 SPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL GA
Sbjct: 62 DKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 113
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+ E IE D
Sbjct: 114 PGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERD 173
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYGI+D VL
Sbjct: 174 TDRDNFMSADQAVEYGIVDAVL 195
>gi|284046814|ref|YP_003397154.1| ATP-dependent Clp protease proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
gi|283951035|gb|ADB53779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
Length = 193
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P++ MVI TA + D+ S L RI++LG + V LI+A+ L+L+ D +K
Sbjct: 2 PLVPMVI---ERTARGEREFDIYSRLLNERIIFLGTAVDDQVANLIVAQLLHLESSDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I +YINS G G AIYD M ++KP + T+C G A +LLL GA+G
Sbjct: 59 DISIYINSPG--------GSIYAGLAIYDTMQFIKPDVQTICCGIAMSMGSLLLMGGARG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R +LP+S I+I QP EGQ+TD+EI +E+ + + ++YA H G+ E++ D+
Sbjct: 111 KRMSLPNSRILIHQPSAGFEGQSTDIEIHAREIIKTRKRIDEIYAFHTGQPEERVNHDME 170
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R ++F P EAVEYG+ID+V+
Sbjct: 171 RDRFFKPDEAVEYGLIDRVI 190
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 17/201 (8%)
Query: 80 VIPFTSGTAWEQPPP-----DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
+IPF EQ P D+ S L K RI++LG V +I+A+ L+L+ +D +K
Sbjct: 3 LIPFV----IEQTPRGERSYDIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDK 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I YINS G G T AIYD M Y+K + TLC+G A A+LL AG +G
Sbjct: 59 DITFYINSPG--------GVVTAGLAIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP+S I+I QP+G +GQA+D++I KE+ ++ +L ++ A H G++ ++I+ D
Sbjct: 111 KRYALPNSRILIHQPMGGYQGQASDIDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTE 170
Query: 255 RPKYFSPSEAVEYGIIDKVLY 275
R + S E+ YGIIDKVLY
Sbjct: 171 RDYFMSAEESKTYGIIDKVLY 191
>gi|224824981|ref|ZP_03698087.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540404|ref|YP_004847829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
gi|224602652|gb|EEG08829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643582|dbj|BAK77415.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudogulbenkiania sp. NH8B]
Length = 207
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+L L++A+ L+L+ E+ +K IY YINS G G
Sbjct: 28 DIYSRLLKERIVFLVGPVTDESANLVVAQMLFLESENPDKDIYFYINSPG--------GS 79
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ +I+D M ++KP + TLC+G A A LL AGAKG R ALP+S IMI QP+G +
Sbjct: 80 VSAGMSIFDTMNFIKPDVSTLCIGQAASMGAFLLSAGAKGKRFALPNSRIMIHQPLGGFQ 139
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D EI K + +K L +L A H G++ E+IE D R + S EA+ YG+IDK+L
Sbjct: 140 GQASDFEIHAKNILYMKRRLNELLALHTGRSIEEIERDTDRDNFMSSEEALAYGLIDKML 199
Query: 275 YTEKSPE 281
+ + +
Sbjct: 200 QSRRDAQ 206
>gi|383317431|ref|YP_005378273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
gi|379044535|gb|AFC86591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
Length = 209
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 115/188 (61%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L V +++A+ L+L+ E+ +K I+LYINS G
Sbjct: 19 TARGERSYDIYSRLLKERVIFLVGEVNDQVANVLIAQMLFLESENPDKDIHLYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+K + T+CVG A A+LLL AGAKG R +LP+S +MI
Sbjct: 77 ------GVVTAGLAIYDTMQYIKCDVSTMCVGQACSAASLLLMAGAKGKRFSLPNSRVMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G GQATD+EI +E+ ++ +L ++Y H G+ E+IE D+ R ++ S A E
Sbjct: 131 HQPSGGARGQATDIEIQAQEILYLRRKLNQIYVDHTGQPLEKIERDMERDRFMSAETAKE 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDEVL 198
>gi|260776382|ref|ZP_05885277.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607605|gb|EEX33870.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
coralliilyticus ATCC BAA-450]
Length = 208
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + + +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMAADQAVEYGLVDAVL 203
>gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum ATCC 824]
gi|337737851|ref|YP_004637298.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
gi|384459361|ref|YP_005671781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|18202304|sp|P58276.1|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium
acetobutylicum ATCC 824]
gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
gi|336292077|gb|AEI33211.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum DSM 1731]
Length = 193
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R+++LG + L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A + LL AGA G R ALP+S IMI QP+G +
Sbjct: 71 ITSGMAIYDTMQYVKPDVSTICIGMAASMGSFLLTAGAPGKRFALPNSEIMIHQPLGGFK 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + + +K +L +Y++ GK E IE D R + S EA EYG+ID+V+
Sbjct: 131 GQATDIGIHAQRILEIKKKLNSIYSERTGKPIEVIEKDTDRDHFLSAEEAKEYGLIDEVI 190
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K RI++LG L++A+ L+L+ ED +K IYLYINS G
Sbjct: 11 TARGERSYDIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDIYLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G + AIYD M Y+KP + T+CVG A AA+LL AGAKG R ALP+S IMI
Sbjct: 69 ------GVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEIMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G GQATD+ I + + +K L ++ ++ G+ E+IE D R + + EA E
Sbjct: 123 HQPLGGARGQATDIAIHAEHILKLKKRLNEILSERTGQPIERIEKDTDRDNFMTALEAKE 182
Query: 267 YGIIDKVL 274
YG+ID V+
Sbjct: 183 YGLIDDVI 190
>gi|386285277|ref|ZP_10062493.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp. AR]
gi|385343796|gb|EIF50516.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp. AR]
Length = 195
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L V ++A+ L+L+ +D +K IY YINS G G
Sbjct: 19 DIYSRLLKDRIIMLSGEVNDQVASTVVAQLLFLEAQDPDKDIYFYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +++D M Y+KP I T+C+G A A LL +G KG R ALP + IMI QP G +
Sbjct: 71 ITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPSGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I +E++ +K L ++ A+ GKT ++IE D R + S EA+EYG+IDKVL
Sbjct: 131 GQSTDIQIQAQEIQRLKDTLNEILAEQTGKTTKRIEKDTERDNFMSAREALEYGLIDKVL 190
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L + ++ G++ E+I+ D R + + EA EYG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNHILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 VPE 193
>gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Burkholderia rhizoxinica HKI 454]
gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC
3.4.21.92) [Burkholderia rhizoxinica HKI 454]
Length = 238
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 20/242 (8%)
Query: 40 ISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRS------PVITMVIPFTSGTAWEQPP 93
I+ +N S+ D + R D LN PR ++ MV+ TSG +
Sbjct: 8 ITEASNNSIQKDRR-MTFRADLLN--QLATHAPRDFEAQALGLVPMVVE-TSGRG--ERA 61
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLG 153
D+ S L K R+V+L L++A+ L+L+ E+ +K I LYINS G G
Sbjct: 62 YDIYSRLLKERLVFLVGEVNDQAANLVVAQLLFLESENPDKDISLYINSPG--------G 113
Query: 154 YETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRI 213
+ AIYD M ++KP + TLC+G A A LL AGAKG R ALP++ +MI QP+G
Sbjct: 114 SVSAGMAIYDTMQFIKPDVTTLCMGLAASMGAFLLAAGAKGKRIALPNARVMIHQPLGGA 173
Query: 214 EGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKV 273
GQA+D+EI +E+ +K L L A+H G+ EQI+ D R + S +A YG+ID+V
Sbjct: 174 RGQASDIEIQAREILFLKERLNNLLAQHTGQPVEQIQRDTDRDNFMSAEDAQAYGLIDQV 233
Query: 274 LY 275
L+
Sbjct: 234 LH 235
>gi|254507754|ref|ZP_05119885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
gi|219549279|gb|EED26273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
Length = 208
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP++ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L KL A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + + +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMAAEQAVEYGLVDAVL 203
>gi|357059570|ref|ZP_09120412.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
gi|355371647|gb|EHG18991.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas infelix
ATCC 43532]
Length = 203
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG SV +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ++LL AGA G R ALP + IMI QP+G +
Sbjct: 72 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ + A H G+ PE+I D R + S EA YG+ID+V+
Sbjct: 132 GQSTDIQIQAKEILRLREVGNNILAHHTGQDPEKINVDTERDNFMSAEEARAYGLIDEVV 191
>gi|114777030|ref|ZP_01452050.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
gi|114552551|gb|EAU55011.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
Length = 207
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 115/197 (58%), Gaps = 8/197 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV+L LI+A+ L+L+ E +K IY+YINS G G
Sbjct: 19 DIFSRLLKERIVFLNGQVDDHTANLIIAQLLFLESEGPDKDIYMYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ + TLC+G A A LL +GA G R +LP+S IMI QP+G +
Sbjct: 71 VTSGLAIYDTMQYIRCDVSTLCIGQAASMGAHLLASGAPGKRFSLPNSRIMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ ++K L ++ AKH G+ E++ D+ R + + +A EYG++DKVL
Sbjct: 131 GQATDIEIHAREILSLKNRLNEMMAKHTGQPIEKLADDVERDYFLTADQACEYGLVDKVL 190
Query: 275 YTEKSPEDHGVVSDLKK 291
+ G +D KK
Sbjct: 191 SSRAEAVAAGGGNDDKK 207
>gi|392551110|ref|ZP_10298247.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
spongiae UST010723-006]
Length = 203
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 8/205 (3%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
+ P P+ +V TA + D+ S L K R+++L ++ LI+A+ L+L+
Sbjct: 3 NNPVDPLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDNMANLIVAQLLFLES 62
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E+ EK I++YINS G G T AIYD M ++KP I T+C+G A A LL
Sbjct: 63 ENPEKDIFIYINSPG--------GSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLS 114
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
G KG R LP+S +MI QP+G +GQA+D EI KE+ ++K +L +L A+H G+ E +
Sbjct: 115 GGTKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLEVV 174
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
D R + S +AV+YG++D +L
Sbjct: 175 SNDTDRDNFMSAQQAVDYGLVDGIL 199
>gi|114563762|ref|YP_751275.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
frigidimarina NCIMB 400]
gi|122299288|sp|Q07ZX8.1|CLPP_SHEFN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114335055|gb|ABI72437.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
frigidimarina NCIMB 400]
Length = 203
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 8/206 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
+ P S + +V TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 2 HNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLE 61
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E +K IYLYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 62 SESPDKDIYLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCMGQAASMGAFLL 113
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
GAKG R LP+S +MI QP+G +GQA+D+ I KE+ +K +L ++ A+H G+ +
Sbjct: 114 AGGAKGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLDI 173
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVL 274
IE D R + S ++AVEYGI+D +L
Sbjct: 174 IERDTDRDNFMSATQAVEYGIVDSLL 199
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 70 VTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA +YG+ID+V+
Sbjct: 130 GQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVI 189
>gi|357132342|ref|XP_003567789.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 1, chloroplastic-like [Brachypodium distachyon]
Length = 390
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGT-TKGGEKL 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT + E +
Sbjct: 165 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELV 224
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+A+AI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 225 ASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGMKGKRGVLPNSITKLHLPKVH 284
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ +R P+YF EA++YG+ D
Sbjct: 285 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEAIDYGLAD 344
Query: 272 KVLYT 276
+L++
Sbjct: 345 TILHS 349
>gi|72383092|ref|YP_292447.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|115311351|sp|Q46ID4.1|CLPP3_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|72002942|gb|AAZ58744.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V + ++A+ L+L+ +D EK I LY+NS G G
Sbjct: 17 DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP+S IMI QP+G +
Sbjct: 69 VTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ ++I D R + SP EAVEYG+IDKV+
Sbjct: 129 GQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVV 188
>gi|427720043|ref|YP_007068037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427352479|gb|AFY35203.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 232
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V I+A+ L+L ED EK I LYINS G G
Sbjct: 45 DIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQLYINSPG--------GS 96
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M ++P + T+C G A A LL AGA G R +LP S IMI QP+G +
Sbjct: 97 VYAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLTAGAAGKRMSLPDSRIMIHQPLGGAQ 156
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ +KA+L +L ++H G++ E+IEAD R + S EA YG+ID+V+
Sbjct: 157 GQAIDIEIQAREILYIKAKLNQLMSQHTGQSLEKIEADTERDFFMSAEEAKNYGLIDQVI 216
Query: 275 YTEKSP 280
+ P
Sbjct: 217 SRQNIP 222
>gi|408825009|ref|ZP_11209899.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
geniculata N1]
Length = 202
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ EKPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVDDAVSALVCAQLLFLESENPEKPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ A+YD M Y+ P+ TLC+G A + LL AG G+RAAL ++++ + QP+G ++
Sbjct: 75 ISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALANASLHVHQPLGGVQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G++ E +E + R ++ S +A E+G+ID+VL
Sbjct: 135 GQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEDVEQTLDRYRFMSAEQACEWGLIDQVL 194
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 195
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + ++A+ L L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++P + T+CVG A A LL AGAKG R +LP+S IMI QP+G +
Sbjct: 69 VSAGLGIFDTMNQIQPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ +K +L A H G+ E+IE D R + S EAV YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYLKKQLNHYMASHTGQPLEKIEEDTERDFFMSAEEAVNYGLIDRVV 188
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++LG +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPG--------GV 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M Y+KP + T+C+G A A++LL AGA G R ALP + IMI QP G +
Sbjct: 72 VTAGLAMYDTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQPSGGAQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I KE+ ++ ++ AKH G+ PE I D R + S +A YG+ID+V+
Sbjct: 132 GQSTDIQIQAKEILRLRETANEILAKHTGQKPEAINVDTERDNFMSAEDAKAYGLIDEVV 191
Query: 275 YTEKS 279
K+
Sbjct: 192 VRPKA 196
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + I+A+ L+L +D EK I +YINS G G
Sbjct: 37 DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPG--------GV 88
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++K + T+CVG A A+LL AGAKG R +LP+S IMI QP+G
Sbjct: 89 ITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPNSRIMIHQPLGGAR 148
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE++ +K K+ ++ GK+ E+I AD R + SP EAV YG+IDK+L
Sbjct: 149 GQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 208
>gi|218197363|gb|EEC79790.1| hypothetical protein OsI_21214 [Oryza sativa Indica Group]
Length = 386
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 94 PDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKL- 152
PDL S L +RI++LGM VP+VTELI A+FL+L Y+D KPIYLYINSTGT L
Sbjct: 161 PDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNGLV 220
Query: 153 GYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQP-IG 211
ET+AFAI D + K ++T+ + A+G+AA+LL G KG R LP+S + P +
Sbjct: 221 ASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVH 280
Query: 212 RIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIID 271
+ G A D+ I KE+ ++L +K GK E++ ++ P+YF EA++YG+ D
Sbjct: 281 KSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLAD 340
Query: 272 KVLYT-EKSPEDHGVVSDLKKAQ 293
+L++ + S + + + L KAQ
Sbjct: 341 TILHSLDGSFKPKDLTAQLAKAQ 363
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG +V I+++ L+LQ +D EK IYLYINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FAIYD + ++KP + T+C+G A + LL AGAKG R ALP++ +MI QP+G +
Sbjct: 71 VTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA + + +L ++ A+ G++ E+I+ D R + + EA YG+ID+V+
Sbjct: 131 GQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAKSYGLIDEVM 190
Query: 275 YTE 277
E
Sbjct: 191 EPE 193
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG +V +++A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A ++LL AGAKG R ALP S IMI QP+G +
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQ+TD++I +E+ ++ L ++ ++H G++ +++ D R + S EA +YG+ID+V+
Sbjct: 131 GQSTDIQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEAKKYGLIDEVI 190
>gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 218
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG V + ++A+ L+L+ +D EK I LY+NS G G
Sbjct: 41 DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP+S IMI QP+G +
Sbjct: 93 VTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA ++EI KE+ +K L L A+H G+ ++I D R + SP EAVEYG+IDKV+
Sbjct: 153 GQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVV 212
>gi|374623544|ref|ZP_09696052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
gi|373942653|gb|EHQ53198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ectothiorhodospira sp. PHS-1]
Length = 216
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 8/190 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R++++ + +I+A+ L+L+ E+ +K I LYINS G
Sbjct: 28 TARGERAYDIYSRLLKERVIFVVGPVEDYMANVIVAQLLFLESENPDKDISLYINSPG-- 85
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + TLC+G A A+LL GA G R LP S +MI
Sbjct: 86 ------GVVTAGLAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAAGKRYCLPHSRVMI 139
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQATD++I +E+ V+ +L + +KH G+ E+IE D R ++ S ++A E
Sbjct: 140 HQPLGGFQGQATDIDIHAREILKVRDQLNGILSKHTGQPVERIEQDTERDRFLSATDAQE 199
Query: 267 YGIIDKVLYT 276
YGIIDKVL T
Sbjct: 200 YGIIDKVLET 209
>gi|424874186|ref|ZP_18297848.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|393169887|gb|EJC69934.1| protease subunit of ATP-dependent protease [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 203
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPINLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M +++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGFAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D++I +E+ K + +LYA+H G++ E E + R ++ + EA+E+G+ID++L
Sbjct: 135 GQASDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMTAEEALEWGLIDRIL 194
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 114/200 (57%), Gaps = 12/200 (6%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P T W D+ + LY+ RI++LG + I+A LYL ED K
Sbjct: 6 PKVPYRLPGEQYTQW----IDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AI+D M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIYLYINSPG--------GSVTAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG 113
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP G GQATD+EI +E+ ++ +L ++YA + GK E+IE D+
Sbjct: 114 KRLALPHSRIMIHQPSGGARGQATDIEIEAREIIRIRRQLNQIYANNTGKPLEKIEKDMD 173
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA+EYG+ID+V+
Sbjct: 174 RDFFMSAQEAMEYGLIDRVI 193
>gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
Length = 194
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ +D +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+CVG A A LL AGAKG R ALP+ST+MI QP+G
Sbjct: 71 VTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTVMIHQPLGGTR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + ++K +L K+ A+ G+ E ++A+ R + + EA ++G+ID+V+
Sbjct: 131 GQATDIEIHTKYLLSIKEKLNKILAERTGQDLETVKANTERDNFMTADEARDFGLIDEVI 190
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+++ + I+A+ L+L +D EK I +YINS G G
Sbjct: 32 DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPG--------GV 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++K + T+CVG A A+LL AGAKG R +LP+S IMI QP+G
Sbjct: 84 ITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPNSRIMIHQPLGGAR 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I KE++ +K K+ ++ GK+ E+I AD R + SP EAV YG+IDK+L
Sbjct: 144 GQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 203
>gi|375090912|ref|ZP_09737219.1| ATP-dependent Clp protease proteolytic subunit [Helcococcus kunzii
ATCC 51366]
gi|374565048|gb|EHR36326.1| ATP-dependent Clp protease proteolytic subunit [Helcococcus kunzii
ATCC 51366]
Length = 196
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 115/184 (62%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+++ + ++I+A+ L+L++ED +K I LYINS G G
Sbjct: 19 DIYSRLLKERIIFVSGEINDQMADIIVAQLLFLEFEDPDKDIQLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AI+D M Y+KP + T+C+G A A+LL +GAKG R +LP++ I+I QP+G +
Sbjct: 71 VTAGLAIFDTMNYIKPDVSTICIGQAASMGAVLLTSGAKGKRYSLPNANILIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++ I +++ ++ L K+ + G+ EQI+ D R KY + EA++YG+IDKV+
Sbjct: 131 GQATEISIVAEQILKIRERLNKILSDSTGQDMEQIKLDTERDKYMTAQEALDYGLIDKVI 190
Query: 275 YTEK 278
+ K
Sbjct: 191 DSHK 194
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 9/208 (4%)
Query: 72 PRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYE 130
PR + +IP+ T+ + D+ S L K+RI++LG +V I+A+ L+LQ E
Sbjct: 7 PRGGTVMNLIPYVVEQTSRGERSYDIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTE 66
Query: 131 DVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGA 190
D K I LYINS G G + FAIYD M +VK I T+C+G A A LL +
Sbjct: 67 DPNKDIQLYINSPG--------GSISAGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSS 118
Query: 191 GAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIE 250
G KG R ALP+S +MI QP+G +GQA+D+EI+ K + ++ L +L + G+ ++I+
Sbjct: 119 GTKGKRLALPNSEVMIHQPLGGAQGQASDIEISAKRILRMRDRLNQLLSDQTGQPLKKIQ 178
Query: 251 ADIRRPKYFSPSEAVEYGIIDKVLYTEK 278
D R + S +A +YG+IDK++ +K
Sbjct: 179 QDTDRDHFMSAEDAKKYGLIDKIIEHQK 206
>gi|389815589|ref|ZP_10206852.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
gi|388465795|gb|EIM08109.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
Length = 203
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 115/189 (60%), Gaps = 8/189 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+R++ LG +V I+A+ L+L+ ED +K I +YINS G G
Sbjct: 19 DIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLEAEDPDKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +++P + T+C+G A A LL AG KG R ALP++ +MI QP+G +
Sbjct: 71 ITAGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + +++ +L ++ ++ G+ + I D R + + A+EYG+ID+V+
Sbjct: 131 GQATEIEIAAKRILHLREKLNQILSERTGQPIDVISKDTDRDNFMTAERALEYGLIDQVI 190
Query: 275 YTEKSPEDH 283
K PEDH
Sbjct: 191 TRSKLPEDH 199
>gi|197123826|ref|YP_002135777.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
gi|226706439|sp|B4UAX9.1|CLPP_ANASK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|196173675|gb|ACG74648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
Length = 203
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G
Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GS 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKP + T+C+G A A LL GA G R A+P++ IMI Q G +
Sbjct: 73 VTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQLSGGFQ 132
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE +KA+L ++ A+H + E+IE D R + S EA EYG+ID V
Sbjct: 133 GQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAGEAKEYGLIDDVF 192
Query: 275 YTEKSPE 281
+K+ E
Sbjct: 193 LHKKAAE 199
>gi|116256435|sp|Q3ANI8.2|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 76 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ ++I D R + SP+EAVEYG+ID+V+
Sbjct: 136 GQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 195
Query: 275 YTEKSPEDHGVVSD 288
S D G++++
Sbjct: 196 ---DSSGDGGIITE 206
>gi|418296393|ref|ZP_12908237.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355539825|gb|EHH09063.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 115/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ +KPI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENPKKPIHLYINSPG--------GM 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I+I QP G +
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGMRAALPNASILIHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E++ K + +LYA+H G++ E+ E + R ++ + EA+E+ +ID++L
Sbjct: 135 GQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFERAMDRDRFMTVQEALEWSLIDRIL 194
>gi|327264015|ref|XP_003216812.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Anolis carolinensis]
Length = 266
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 124/222 (55%), Gaps = 13/222 (5%)
Query: 55 LRLRPDCLNPDSFCKSKPRS--PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSF 112
LRL L+ PR+ P+I +V+ T + D+ S L + RIV +
Sbjct: 25 LRLGCHILSVSRCLHQSPRNHIPLIPIVV---EQTGRGERAYDIYSRLLRERIVCVMGPI 81
Query: 113 VPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPI 172
V L++A+ L+LQ E +KPI++YINS G T T AIYD M Y+ PI
Sbjct: 82 DDGVASLVIAQLLFLQSESNKKPIHMYINSPGGTV--------TSGLAIYDTMQYILNPI 133
Query: 173 FTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKA 232
T CVG A +LLL AG+ G R +LP+S IMI QP G GQATD+ I +E+ +K
Sbjct: 134 CTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKK 193
Query: 233 ELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
++ +YAKH + E IEA + R +Y SP EA E+GI+DKVL
Sbjct: 194 QINGIYAKHTKQNLEVIEAAMERDRYMSPVEAQEFGILDKVL 235
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG S++ +I+A+ L+L+ +D EK I+LYINS G G
Sbjct: 17 DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M +++P + T+CVG A A LL GAKG R +LP + IMI QP+G +
Sbjct: 69 VTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K+ L +L A H G+ ++I D R + SP EA YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYHKSRLNELMAFHTGQPIDRIAEDTDRDFFMSPYEAKNYGLIDEVV 188
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 18 DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GS 69
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M ++P + T+C G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 70 VTAGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 129
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ K L A+H G+ E+I D R + SP EA EYG+ID+V+
Sbjct: 130 GQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKEYGLIDQVI 189
>gi|301784789|ref|XP_002927807.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 273
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 111/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|281339765|gb|EFB15349.1| hypothetical protein PANDA_017639 [Ailuropoda melanoleuca]
Length = 272
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 111/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + SV L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|209523050|ref|ZP_03271607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376001697|ref|ZP_09779556.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|209496637|gb|EDZ96935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375329926|emb|CCE15309.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ +K +L + AKH + +IE D R + S +AV YG+ID+V+
Sbjct: 129 GQATDIEIQAREILYLKRQLNENLAKHTEQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + LI+A+ L+L+ ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ I+D M ++P I T+CVG A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VSAGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L + A+H G+ E+IE D R + S E+ YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYHKRRLNEFLAQHTGQPLEKIEEDTERDFFMSAEESKNYGLIDQVI 188
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 119/221 (53%), Gaps = 8/221 (3%)
Query: 60 DCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTEL 119
D L S+ KS+ S +V + + DL S L + RI++LG ++
Sbjct: 9 DNLVNSSYSKSQVYSGPSNIVPMVVEQSGMGERAFDLYSRLLRERIIFLGTQVDENLANT 68
Query: 120 ILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGN 179
I A+ L+L ED EK I LYINS G G T AIYD M V+P + T+C G
Sbjct: 69 ITAQMLFLDAEDPEKDIQLYINSPG--------GSVTAGMAIYDTMQQVRPDVVTICYGL 120
Query: 180 AWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYA 239
A A LL GAKG R +LPSS IMI QP+G +GQA D+EI KE+ K +L +L A
Sbjct: 121 AASMGAFLLSGGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNELLA 180
Query: 240 KHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
+H G+ E+IE D R + S EA YG+ID+V+ + P
Sbjct: 181 EHTGQPLEKIEVDTERDFFMSAEEAKNYGLIDQVITRQNLP 221
>gi|334118528|ref|ZP_08492617.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333459535|gb|EGK88148.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 229
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 65 DSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
+ F S S V+ MV+ + + D+ S L + RIV+LG V + I+A+
Sbjct: 15 NDFDVSSSPSNVVPMVL---EQSGMGERAFDIYSRLLRERIVFLGTPVTDEVADSIVAQL 71
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
LYL ED EK + +YINS G G T AIYD M ++P + T+C G A
Sbjct: 72 LYLDAEDPEKDVQMYINSPG--------GSVTAGMAIYDTMQQIRPDVVTICYGLAASMG 123
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL AGA G R +LPSS IMI QP+G +GQA D+EI KE+ K +L +L A H G+
Sbjct: 124 AFLLTAGAHGKRMSLPSSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQ 183
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVLYTEKSP 280
+++EAD R + S EA YG++D+V+ E P
Sbjct: 184 PLDKLEADTERDFFMSAEEAKNYGLVDRVIAKENLP 219
>gi|115459516|ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|215768496|dbj|BAH00725.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 102 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GV 153
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ P+ TLC+G A A+LLL AGA+G R ALP++ +MI QP G
Sbjct: 154 VTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGAS 213
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ V+ L K+YAKH + ++IE + R + P EA ++G+ID+V+
Sbjct: 214 GQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 273
>gi|431922359|gb|ELK19450.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Pteropus alecto]
Length = 274
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 111/188 (59%), Gaps = 10/188 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV + V L++A+ L+LQ E +KPI++YINS G G
Sbjct: 70 DIYSRLLRERIVCVMGPIDDGVASLVIAQLLFLQSESNKKPIHMYINSPG--------GM 121
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+ PI T CVG A +LLL AG G R +LP+S IMI QP G
Sbjct: 122 VTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR 181
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I +E+ +K +L +YAKH ++ + IE+ + R +Y SP EA E+GI+DKVL
Sbjct: 182 GQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVL 241
Query: 275 YTEKSPED 282
P+D
Sbjct: 242 V--HPPQD 247
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 41 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 93 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ ++I D R + SP+EAVEYG+ID+V+
Sbjct: 153 GQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVV 212
Query: 275 YTEKSPEDHGVVSD 288
S D G++++
Sbjct: 213 ---DSSGDGGIITE 223
>gi|389756357|ref|ZP_10191467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 115]
gi|388431605|gb|EIL88663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
sp. 115]
Length = 209
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L +V +I+A+ L+L+ E+ +K I+ YINS G
Sbjct: 19 TARGERSYDIYSRLLKERVIFLVGPIDDNVANVIVAQMLFLESENPDKDIHFYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + T+C+G A +LLL AGA G R ALP+S +MI
Sbjct: 77 ------GVVTAGLAIYDTMQFIKPDVSTMCIGQACSAGSLLLMAGAAGKRFALPNSRVMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G +GQATD+EI KE+ ++ L LYA H GK E+I D+ R ++ S +A
Sbjct: 131 HQPSGGAQGQATDIEIHAKEILYLRQRLNGLYAHHTGKPIEEIAHDMERDRFLSAEDAKT 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDQVL 198
>gi|430743442|ref|YP_007202571.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
gi|430015162|gb|AGA26876.1| protease subunit of ATP-dependent protease [Singulisphaera
acidiphila DSM 18658]
Length = 204
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P+I +VI + E+ D+ S L ++RI+ LG + +V+ LI+A+ L L ++D +
Sbjct: 2 PLIPIVI---ERSGREERAMDIYSRLLQDRIIILGSAIDDNVSNLIVAQMLVLAHQDAKA 58
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
I+LYINS G G T AIYD M +V + T C+G +LLL AGAKG
Sbjct: 59 DIHLYINSPG--------GSVTAGMAIYDTMQWVSCDVATYCIGQCASMGSLLLAAGAKG 110
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP IMI QP+ +EG ATD+ I +E +K +L ++Y KH G+T E+++ D
Sbjct: 111 KRNALPHGRIMIHQPLAGMEGTATDILIHAEEFLRMKKQLNQIYQKHTGQTLEKLQEDTD 170
Query: 255 RPKYFSPSEAVEYGIIDKVLYTEKS 279
R ++ SP E+ +YG+ID V+ E S
Sbjct: 171 RDRFMSPEESRDYGLIDNVVDREPS 195
>gi|170049615|ref|XP_001857723.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
gi|167871378|gb|EDS34761.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
Length = 225
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI+ L ++ LI+A+ L+LQ E+ KPI++YINS G G
Sbjct: 43 DIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTKPIHMYINSPG--------GS 94
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M YVKPP+ T CVG A +LLL AGA G R +LP++ IMI QP G +
Sbjct: 95 VTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNARIMIHQPSGGAQ 154
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD++I +E+ +K +L ++YAKH E + A + R + +P EA GIID VL
Sbjct: 155 GQATDIQIQAEEILKLKKQLTEIYAKHTKSPYETLLAKMERDTFLNPEEAQTLGIIDTVL 214
>gi|125591043|gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
Length = 221
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 14 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GV 65
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ P+ TLC+G A A+LLL AGA+G R ALP++ +MI QP G
Sbjct: 66 VTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGAS 125
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ V+ L K+YAKH + ++IE + R + P EA ++G+ID+V+
Sbjct: 126 GQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 185
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 110/183 (60%), Gaps = 8/183 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG + + + I+A+ LYL+ +D EK IY+YINS G G
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPG--------GS 99
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M +KP + T+C G A A LL GAKG R LP+S IMI QP+G +
Sbjct: 100 VYAGMAIYDTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRLGLPNSRIMIHQPLGGAQ 159
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ +K +L +L A H G+ E+I D R Y S +EA EYG+ID+V+
Sbjct: 160 GQASDIEIQAKEILYIKNKLNQLLADHTGQPLEKISLDTERDFYMSSTEAQEYGLIDEVI 219
Query: 275 YTE 277
E
Sbjct: 220 IRE 222
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|422346059|ref|ZP_16426973.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|422874317|ref|ZP_16920802.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
gi|21759067|sp|Q8XKK1.1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53.1|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2.1|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|373226681|gb|EHP49003.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens WAL-14572]
gi|380304794|gb|EIA17080.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens F262]
Length = 194
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 121/201 (60%), Gaps = 11/201 (5%)
Query: 74 SPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVE 133
S ++ MV+ TS + D+ S L K+RI+ L L++A+ L+L+ ED +
Sbjct: 2 SNLVPMVVEQTSKG---ERSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPD 58
Query: 134 KPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAK 193
K I+LYINS G G T AIYD M Y+KP + T+C+G A A LL +GAK
Sbjct: 59 KDIHLYINSPG--------GSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAK 110
Query: 194 GNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADI 253
G R ALP++ IMI QP+G +GQATD++I K + +K +L ++ +++ + E+I+ D+
Sbjct: 111 GKRFALPNAEIMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDV 170
Query: 254 RRPKYFSPSEAVEYGIIDKVL 274
R + SEAVEYG+IDKV+
Sbjct: 171 ERDYFMEASEAVEYGLIDKVI 191
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 197
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 114/200 (57%), Gaps = 12/200 (6%)
Query: 75 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEK 134
P + +P + T W D+ + LY+ RI++LG + I+A LYL ED K
Sbjct: 6 PKVPYRMPGEAYTQW----IDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGK 61
Query: 135 PIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKG 194
IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG
Sbjct: 62 DIYLYINSPG--------GMVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG 113
Query: 195 NRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIR 254
R ALP S IMI QP G GQATD+EI +E+ ++ +L ++YA + G+ E+IE D+
Sbjct: 114 KRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYADNTGQPLEKIEKDMD 173
Query: 255 RPKYFSPSEAVEYGIIDKVL 274
R + S EA +YG+IDKV+
Sbjct: 174 RDFFMSAEEAKQYGLIDKVI 193
>gi|47216266|emb|CAG05962.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 118/202 (58%), Gaps = 11/202 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
RSP+I +V+ T + D+ S L + RI+ + SV LI+A+ L+LQ E
Sbjct: 27 RSPLIPIVV---EQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLIIAQLLFLQSESN 83
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
KPI++YINS G G T AIYD M Y+ PI T CVG A +LLL AG
Sbjct: 84 NKPIHMYINSPG--------GVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGT 135
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G R +LP++ +MI QP G GQATD+ I +E+ +K ++ +YAKH G+ E IE+
Sbjct: 136 AGMRHSLPNARVMIHQPSGGARGQATDIAIQAEEILKLKRQINTIYAKHTGQPLETIESI 195
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
+ R +Y SP EA ++G+ID+VL
Sbjct: 196 MERDRYMSPMEAQDFGLIDRVL 217
>gi|212704616|ref|ZP_03312744.1| hypothetical protein DESPIG_02679 [Desulfovibrio piger ATCC 29098]
gi|212672015|gb|EEB32498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Desulfovibrio piger ATCC 29098]
Length = 200
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 8/190 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T + D+ S L K+RI+ L +V L+ A+ L+L+ +D EK I LYINS G
Sbjct: 11 TGRSERAYDIYSRLLKDRIILLSSEVNDTVASLVCAQLLFLESQDPEKEINLYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M Y+ P+ T+C+G A A LL AG KG R ALP+S IMI
Sbjct: 69 ------GSVTAGLAIYDTMRYITAPVSTVCMGRAASMGAFLLAAGQKGMRYALPNSQIMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQATDV+I +EM +K L + A++ GK+ +++ R + +P +A+E
Sbjct: 123 HQPLGGFQGQATDVDIHAREMLRIKERLNTMLAENTGKSYDEVVRATERDNFLTPEQALE 182
Query: 267 YGIIDKVLYT 276
+GIID+VL +
Sbjct: 183 FGIIDRVLVS 192
>gi|71281884|ref|YP_270452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
gi|110816457|sp|Q47XL8.1|CLPP_COLP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71147624|gb|AAZ28097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
Length = 220
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 73 RSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
S ++ MV+ TA + D+ S L K R+++L + LI+A+ L+L+ E
Sbjct: 24 ESALVPMVVE---QTAKGERSYDIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESP 80
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K IYLYINS G G T AIYD M ++KP I T+C+G A A LL G
Sbjct: 81 DKDIYLYINSPG--------GSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGE 132
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
KG R LP++ +MI QP+G +GQA+D EI KE+ +K +L KL A+H G+T +++ D
Sbjct: 133 KGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILFIKDKLNKLMAEHTGQTLDKVSQD 192
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S AVEYG++D +L
Sbjct: 193 TDRDNFLSAEAAVEYGLVDSIL 214
>gi|334134662|ref|ZP_08508166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333607817|gb|EGL19127.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 195
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 114/182 (62%), Gaps = 8/182 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+LG + V I+A+ L+L+ ED +K I LYINS G G
Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQVANSIIAQLLFLEAEDPQKEISLYINSPG--------GS 71
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ FAIYD M VKPP+ T+C G A AA+LL AG KG R ALP+S IMI QP G ++
Sbjct: 72 TSAGFAIYDAMQLVKPPVHTICTGFAASFAAILLLAGEKGKRFALPNSEIMIHQPHGGVQ 131
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I+ K + ++ L ++ ++ G+ ++++ D+ R + S EA EYGIID+V+
Sbjct: 132 GQASDIAISAKRILGIRERLNRITSERTGQPVDKVDRDMDRDYFMSAEEAREYGIIDQVV 191
Query: 275 YT 276
T
Sbjct: 192 TT 193
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG + L++A+ L+L+ +D EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M V P + T+CVG A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ K +L A+H G+ E+I+ D R + S +EA +YG+ID+V+
Sbjct: 129 GQASDIEIQAKEILYHKQQLNNYLAEHTGQPLEKIQEDTERDFFMSATEAKDYGLIDQVI 188
Query: 275 YTEKSP 280
E+ P
Sbjct: 189 --ERRP 192
>gi|146337660|ref|YP_001202708.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
ORS 278]
gi|146190466|emb|CAL74465.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS 278]
Length = 205
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+L +V+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M +VK P+ TLC+G A + LL AG G R ALP++++ + QP+G +
Sbjct: 75 VTSGLAMYDTMQFVKAPVHTLCMGTARSMGSFLLMAGEPGERTALPNASLHVHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K +++LYA+H G++ E +E + R + + EA ++G+ID+V+
Sbjct: 135 GQASDIMIHAREMEQTKRRMIRLYAEHCGRSYEDVERTLDRDHFMTADEAQDWGLIDRVV 194
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG ++ L++A+ L+L+ ED EK I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K P+ T+CVG A A+LL AGA+G R LP+S IMI QP+G +
Sbjct: 71 VTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIMIHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E+ ++ +L ++ A H + E I D R + +A +YG+IDK++
Sbjct: 131 GQASDISIHAQEILRLREDLNRILAHHCSQDIETIARDTERDFFMGAEDAQKYGLIDKIV 190
>gi|441506114|ref|ZP_20988091.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
gi|441426253|gb|ELR63738.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
Length = 207
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP++ ++P T+ + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 10 SPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 69
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL GA
Sbjct: 70 DKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 121
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
+G R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+ E +E D
Sbjct: 122 QGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVVERD 181
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYG++D VL
Sbjct: 182 TDRDNFMSAEQAVEYGLVDAVL 203
>gi|150398272|ref|YP_001328739.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
medicae WSM419]
gi|150029787|gb|ABR61904.1| Endopeptidase Clp [Sinorhizobium medicae WSM419]
Length = 205
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 115/184 (62%), Gaps = 9/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E KPI LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESPTKPIQLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G RAALP+++I++ QP G +
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALPNTSILVHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E++ K + +LYA+H G+T E+ E + R ++ + EA+E+G+ID +L
Sbjct: 135 GQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMTAEEALEWGLIDCIL 194
Query: 275 YTEK 278
TE+
Sbjct: 195 -TER 197
>gi|407716203|ref|YP_006837483.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
gi|407256539|gb|AFT66980.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
Length = 206
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Query: 69 KSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQ 128
++K + + +V TA + D+ S L K R+++L + LI+A+ L+L+
Sbjct: 2 QNKLEAQALGLVPMVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLE 61
Query: 129 YEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLL 188
E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A ALLL
Sbjct: 62 SENPDKDIHLYINSPG--------GSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLL 113
Query: 189 GAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQ 248
GA+G R ALP S +MI QP+G +GQA+D++I KE+ ++ L K+ A H G+ +
Sbjct: 114 TGGAEGKRFALPHSRMMIHQPLGGFQGQASDIDIHAKEILLIRDRLNKIMASHTGQPLDV 173
Query: 249 IEADIRRPKYFSPSEAVEYGIIDKVLYTEKSPE 281
I+ D R + +AVEYG+ID+VL T E
Sbjct: 174 IQGDTDRDNFMGSQQAVEYGLIDQVLKTRNIEE 206
>gi|389795694|ref|ZP_10198808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
gi|388430346|gb|EIL87520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
Length = 209
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L V L++A+ L+L+ E+ +K I YINS G
Sbjct: 19 TARGERSYDIYSRLLKERVIFLVGEVNDQVANLLVAQMLFLESENPDKDIQFYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + T+C+G A + LL AGAKG R ALP+S +MI
Sbjct: 77 ------GAVTAGLAIYDTMQFIKPSVSTMCIGQACSMGSFLLMAGAKGKRYALPNSRVMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G +GQATD+EI +E+ V+ L KLYA+H G+ +IE D+ R ++ +EA
Sbjct: 131 HQPSGGAQGQATDIEIQAREILYVRERLNKLYAEHTGQPLAKIELDMERDRFMDANEAKT 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDEVL 198
>gi|28897691|ref|NP_797296.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|260898290|ref|ZP_05906786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308094762|ref|ZP_05891792.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
gi|31340006|sp|Q87R80.1|CLPP_VIBPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28805904|dbj|BAC59180.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|308088425|gb|EFO38120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308093191|gb|EFO42886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
Length = 200
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Query: 74 SPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDV 132
SP++ ++P T+ + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 2 SPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 133 EKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGA 192
+K I+LYINS G G T +IYD M ++KP + T+C+G A A LL GA
Sbjct: 62 DKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 113
Query: 193 KGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEAD 252
G R LP+S +MI QP+G +GQA+D++I +E+ +K +L L A+H G+ E IE D
Sbjct: 114 AGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERD 173
Query: 253 IRRPKYFSPSEAVEYGIIDKVL 274
R + S +AVEYGI+D VL
Sbjct: 174 TDRDNFMSAEQAVEYGIVDAVL 195
>gi|425790911|ref|YP_007018828.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
gi|425629226|gb|AFX89766.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Aklavik86]
Length = 195
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV L SV I+A+ L+L+ ED EK I LYINS G G
Sbjct: 19 DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T +IYD M +++P + T+C+G A A LL GAKG R +LP S IMI QP+G +
Sbjct: 71 ITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI E+ +K+ L + A++ G++ EQI D R Y S EA EYG+IDKVL
Sbjct: 131 GQASDIEIISNEILRLKSLLNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVL 190
>gi|434393622|ref|YP_007128569.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265463|gb|AFZ31409.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 202
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG ++ LI+A+ L+L ED EK IYLYINS G G
Sbjct: 17 DIYSRLLRERIIFLGQQIDSNLANLIVAQLLFLDAEDSEKDIYLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D M +++P + T+C G A A LL AG KG R +LP++ IMI QP+G +
Sbjct: 69 VTAGMGIFDTMNHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNARIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K L + A H + E+IE D R + SP EA +YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYHKRRLNEYLAAHTDQPIERIEQDTERDFFMSPDEAKDYGLIDQVI 188
>gi|257065888|ref|YP_003152144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
gi|256797768|gb|ACV28423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
Length = 197
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++L ++++I+A+ L+L+ ED +K I YINS G G
Sbjct: 23 DIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQFYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A AA+LL +GAKG R +LPSS IMI QP G +
Sbjct: 75 VTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRYSLPSSNIMIHQPSGGAQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +++ +K L K+ + + G++ ++IE D R + +EA+EYG+IDKV+
Sbjct: 135 GQASDIVIQAEQIIKIKERLNKILSDNTGQSLKKIEKDTDRDFAMTAAEALEYGLIDKVI 194
>gi|213160794|ref|ZP_03346504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 155
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 102/159 (64%), Gaps = 8/159 (5%)
Query: 116 VTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTL 175
+ LI+A+ L+L+ E+ EK IYLYINS G G T +IYD M ++KP + T+
Sbjct: 1 MANLIVAQMLFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTI 52
Query: 176 CVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELV 235
C+G A A LL AGAKG R LP+S +MI QP+G +GQATD+EI +E+ VK +
Sbjct: 53 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 112
Query: 236 KLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
+L A H G++ EQIE D R ++ S EAVEYG++D +L
Sbjct: 113 ELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 151
>gi|317495864|ref|ZP_07954227.1| Clp protease [Gemella morbillorum M424]
gi|316914041|gb|EFV35524.1| Clp protease [Gemella morbillorum M424]
Length = 212
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 8/191 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + D+ S L K+RI+ LG V I ++ L+L+ +D EK IY YINS G
Sbjct: 11 TSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDIYFYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T FAIYD M ++K + T+C+G A A LL AG G R ALP++ +MI
Sbjct: 69 ------GSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEVMI 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQAT++EIA K + + +L K+ A G+T + IE D R Y S EA
Sbjct: 123 HQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLSAEEACA 182
Query: 267 YGIIDKVLYTE 277
YG++DKV+Y E
Sbjct: 183 YGLVDKVMYPE 193
>gi|302878843|ref|YP_003847407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
gi|302581632|gb|ADL55643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 118/199 (59%), Gaps = 11/199 (5%)
Query: 76 VITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKP 135
+I MV+ TSG + D+ S L K R+V+L LI+A+ L+L+ E+ +K
Sbjct: 11 MIPMVVE-TSGRG--ERAYDIYSRLLKERVVFLVGEVNDHSANLIVAQMLFLESENPDKD 67
Query: 136 IYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGN 195
I+ YINS G G T AIYD M ++KP + TLC+G A A LL AG KG
Sbjct: 68 IHFYINSPG--------GSVTAGMAIYDTMQFIKPAVSTLCIGQAASMGAFLLTAGEKGK 119
Query: 196 RAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRR 255
R ALP+S +MI QP+G GQA+D+EI +E+ +K +L ++ A H G+T E IE D R
Sbjct: 120 RFALPNSRVMIHQPLGGFRGQASDIEIHAREILYLKQKLNQMLADHTGQTVEAIERDTDR 179
Query: 256 PKYFSPSEAVEYGIIDKVL 274
+ S ++AV YG++D+VL
Sbjct: 180 DNFLSAADAVAYGLVDQVL 198
>gi|374585518|ref|ZP_09658610.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptonema
illini DSM 21528]
gi|373874379|gb|EHQ06373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptonema
illini DSM 21528]
Length = 201
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 8/195 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
T+ + P D+ S L ++RIV++G I+A+ L+L+ ED + IY+YINS G
Sbjct: 11 TSRGERPYDVYSRLLRDRIVFIGHPINDEYANSIIAQLLFLEAEDPQNDIYIYINSPG-- 68
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
GY + A+YD M Y++P I T+C+G A +LLL AG KG R+ALP++ I +
Sbjct: 69 ------GYISSGLAVYDTMQYIRPDIRTICIGQASNICSLLLTAGTKGKRSALPNARIAM 122
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G + GQ+ D+E+ +E+ N+K L +YA H G+ EQIE D R + S +A
Sbjct: 123 HQPLGGVTGQSRDIELQAQELINIKDRLNNIYAHHTGRPLEQIERDTDRMFHMSAEDAKN 182
Query: 267 YGIIDKVLYTEKSPE 281
YG+ID V + E
Sbjct: 183 YGLIDTVFEFNRKRE 197
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 114/203 (56%), Gaps = 18/203 (8%)
Query: 81 IPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYI 140
+P + T W D+ + LY+ RI++LG + I+A LYL ED K I LYI
Sbjct: 12 MPGETYTQW----IDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIILYI 67
Query: 141 NSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALP 200
NS G G T AIYD M +VK + T+CVG A + LL AG KG R ALP
Sbjct: 68 NSPG--------GMVTAGMAIYDTMQHVKSDVVTICVGLAASMGSFLLAAGTKGKRLALP 119
Query: 201 SSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFS 260
S IMI QP G GQATD+EI +E+ ++ EL +YAK+ G+ E+IE D+ R + S
Sbjct: 120 HSRIMIHQPSGGTRGQATDIEIEAREILRIRQELNGIYAKNTGQPIEKIEKDMDRDFFMS 179
Query: 261 PSEAVEYGIIDKVLYTEKSPEDH 283
EA EYG+ID+V+ EDH
Sbjct: 180 AYEAKEYGLIDRVI------EDH 196
>gi|408373741|ref|ZP_11171435.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
gi|407766445|gb|EKF74888.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
Length = 218
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K R++++ + LI+A+ L+L+ E+ +K I+LYINS G G
Sbjct: 42 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T ++YD M +VKP + T+CVG A A LL AGA G R ALP++ +MI QP+G +
Sbjct: 94 VTAGMSVYDTMQFVKPDVSTMCVGQAASMGAFLLAAGAHGKRFALPNARVMIHQPLGGFQ 153
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+EI KE+ +K +L L A H G+ E++E D R + EA EYG++D VL
Sbjct: 154 GQASDIEIHAKEILKIKGQLNNLLAHHTGQPLERLEKDTDRDNFMGAEEAKEYGLVDAVL 213
>gi|423062476|ref|ZP_17051266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|406716384|gb|EKD11535.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 200
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L ++RIV+LG V LI+A+ L+L ED EK IYLYINS G GG G
Sbjct: 17 DIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYLYINSPG---GGVNAG- 72
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
I+D M +++P + T+C+G A A LL AGAKG R +LP S IMI QP+G +
Sbjct: 73 ----LGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI +E+ +K +L + AKH + +IE D R + S +AV YG+ID+V+
Sbjct: 129 GQATDIEIQAREILYLKRQLNENLAKHTEQPLSRIEEDTERDFFMSAEDAVNYGLIDQVI 188
>gi|126173838|ref|YP_001049987.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS155]
gi|153000122|ref|YP_001365803.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS185]
gi|160874744|ref|YP_001554060.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS195]
gi|217973910|ref|YP_002358661.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS223]
gi|373948994|ref|ZP_09608955.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
gi|378707997|ref|YP_005272891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|386325167|ref|YP_006021284.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|386340598|ref|YP_006036964.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|418023625|ref|ZP_12662610.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|166214708|sp|A3D305.1|CLPP_SHEB5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214709|sp|A6WLQ1.1|CLPP_SHEB8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082464|sp|A9KWH7.1|CLPP_SHEB9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763799|sp|B8E5E9.1|CLPP_SHEB2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125997043|gb|ABN61118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
baltica OS155]
gi|151364740|gb|ABS07740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS185]
gi|160860266|gb|ABX48800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS195]
gi|217499045|gb|ACK47238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS223]
gi|315266986|gb|ADT93839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|333819312|gb|AEG11978.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|334862999|gb|AEH13470.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|353537508|gb|EHC07065.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|373885594|gb|EHQ14486.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
Length = 202
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 11/205 (5%)
Query: 70 SKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQY 129
S +S ++ MVI TA + D+ S L K RI++L + LI+A+ L+L+
Sbjct: 5 SDIQSALVPMVI---EQTAKGERSYDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLES 61
Query: 130 EDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLG 189
E +K I+LYINS G G T AIYD M ++KP + T+C+G A A LL
Sbjct: 62 ESPDKDIFLYINSPG--------GSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLA 113
Query: 190 AGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQI 249
G KG R LP+S +MI QP+G +GQA+D+ I KE+ +K +L ++ A+H G+ E +
Sbjct: 114 GGEKGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLEVV 173
Query: 250 EADIRRPKYFSPSEAVEYGIIDKVL 274
E D R + S ++AVEYG++D V+
Sbjct: 174 ERDTDRDNFMSATQAVEYGLVDSVM 198
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|375363903|ref|YP_005131942.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384161083|ref|YP_005543156.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|384165974|ref|YP_005547353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|384170169|ref|YP_005551547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|384266990|ref|YP_005422697.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385266358|ref|ZP_10044445.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387900080|ref|YP_006330376.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|394991001|ref|ZP_10383811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|421730139|ref|ZP_16169268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429506759|ref|YP_007187943.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451345383|ref|YP_007444014.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452857085|ref|YP_007498768.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166201799|sp|A7Z939.1|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|341829448|gb|AEK90699.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|371569897|emb|CCF06747.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380500343|emb|CCG51381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385150854|gb|EIF14791.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387174190|gb|AFJ63651.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|393808148|gb|EJD69457.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|407076105|gb|EKE49089.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429488349|gb|AFZ92273.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449849141|gb|AGF26133.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452081345|emb|CCP23112.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 198
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 116/189 (61%), Gaps = 10/189 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ LG + +V I+++ L+L+ ED EK I +YINS G G
Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++KP + T+C+G A A LL AG KG R ALP+S +MI QP+G +
Sbjct: 71 ITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQAT++EIA K + ++ +L K+ A+ G+ E IE D R + S EA+EYG+IDKVL
Sbjct: 131 GQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVL 190
Query: 275 YTEKSPEDH 283
++ ED
Sbjct: 191 T--RNTEDQ 197
>gi|359407410|ref|ZP_09199887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677449|gb|EHI49793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR116
cluster alpha proteobacterium HIMB100]
Length = 215
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 111/187 (59%), Gaps = 10/187 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L + L+ A+ L+L+ E+ K I++YINS G G
Sbjct: 32 DIFSRLLKERIIFLNGPVEDVMASLVCAQLLFLEAENPSKDIFMYINSPG--------GV 83
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A +LLL AGA G R +LP + IM QP G +
Sbjct: 84 VTSGLAIYDTMQYIKPDVATVCMGQAASMGSLLLTAGAAGKRYSLPHARIMTHQPSGGFQ 143
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ N++ L K+Y H GKT +QIE + R + SP EA E G+ID+V+
Sbjct: 144 GQATDIEIHAKEIINLRGRLNKIYETHSGKTVKQIEKIMDRDTFMSPYEAKEMGLIDEVV 203
Query: 275 YTEKSPE 281
K PE
Sbjct: 204 --SKRPE 208
>gi|357168023|ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial-like [Brachypodium distachyon]
Length = 300
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KPI+LYINS G G
Sbjct: 93 DIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPG--------GV 144
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ P+ TLC+G A +LLL AGA G R ALP++ +MI QP G
Sbjct: 145 VTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGAS 204
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ V+ L K+YAKH G+ E IE + R + P EA +G+ID+V+
Sbjct: 205 GQASDIAIHAKEILKVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLIDEVI 264
>gi|302337810|ref|YP_003803016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
gi|301634995|gb|ADK80422.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
Length = 205
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV+L + +L++A+ L+L+ D E+ I LYINS G G
Sbjct: 24 DIFSRLLKDRIVFLDGEINDATADLVVAQLLFLESLDPERDISLYINSPG--------GS 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD + Y+KP + T+C+G A AAL+L G+ G R ALPSS I+I QP G +
Sbjct: 76 VTAGLAIYDTIQYIKPDVQTICMGQAASMAALMLTCGSTGKRFALPSSRILIHQPWGGAQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+ I KE+ +K ++ +++H GK E I D+ R + S EAV YGIIDKVL
Sbjct: 136 GQAVDIGIQAKEIVRLKQLTIRYFSQHTGKGEEVIARDLERDYFLSAEEAVAYGIIDKVL 195
Query: 275 YTEKSPE 281
EK+ E
Sbjct: 196 VREKNGE 202
>gi|38344435|emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
gi|116310954|emb|CAH67891.1| OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica Group]
gi|125549084|gb|EAY94906.1| hypothetical protein OsI_16707 [Oryza sativa Indica Group]
Length = 259
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV + L++A+ L+L+ E+ KP++LYINS G G
Sbjct: 52 DIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPG--------GV 103
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y++ P+ TLC+G A A+LLL AGA+G R ALP++ +MI QP G
Sbjct: 104 VTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGAS 163
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I KE+ V+ L K+YAKH + ++IE + R + P EA ++G+ID+V+
Sbjct: 164 GQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLIDEVI 223
>gi|443316648|ref|ZP_21046084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442783734|gb|ELR93638.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 226
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG +V + I+A+ L+L E+ EK + +YINS G G
Sbjct: 41 DIYSRLLRERIVFLGTPVTDAVADAIVAQLLFLDAEEPEKDVQIYINSPG--------GS 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M ++P + T+C G A A LL GAKG R +LPSS IM+ QP+G +
Sbjct: 93 VTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLCGGAKGKRLSLPSSRIMVHQPLGGAQ 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ K L +L A H G+T E+IEAD R Y S EA YG+ID+V+
Sbjct: 153 GQAVDIEIQAREILYHKQRLNELIAHHSGQTLERIEADTERDFYMSAEEAKRYGLIDQVV 212
>gi|410446864|ref|ZP_11300967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [SAR86
cluster bacterium SAR86E]
gi|409980536|gb|EKO37287.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [SAR86
cluster bacterium SAR86E]
Length = 204
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 115/190 (60%), Gaps = 10/190 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RI++L ++ L++A+ L+L+ E+ EK I +YINS G G
Sbjct: 24 DIYSRLLKERIIFLSGPIDDYISNLVVAQLLFLESENPEKDISIYINSPG--------GV 75
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
+ AIYD M ++ P + TLC+G A +LLL GAKG R AL +S IMI QP+G +
Sbjct: 76 ISSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAKGKRFALTNSRIMIHQPLGGFQ 135
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D EI KEM VK ++ ++ +KH GKT +++E D R + + EA YGIID++L
Sbjct: 136 GQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLNAKEAKSYGIIDEIL 195
Query: 275 YTEKSPEDHG 284
E P+ +G
Sbjct: 196 --ESRPDTNG 203
>gi|440227517|ref|YP_007334608.1| ATP-dependent Clp protease proteolytic subunit 2 [Rhizobium tropici
CIAT 899]
gi|440039028|gb|AGB72062.1| ATP-dependent Clp protease proteolytic subunit 2 [Rhizobium tropici
CIAT 899]
Length = 207
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 116/191 (60%), Gaps = 8/191 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L V+ L+ A+ L+L+ E+ ++PI+LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDDVSALVCAQLLFLEAENPKRPIHLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M YV+ P+ TLC+G A + LL +G G R ALP+++I I QP+G +
Sbjct: 75 VTSGLAMYDTMRYVRAPVHTLCMGTARSMGSFLLMSGQPGERTALPNASIHIHQPLGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +EM+ K + +LYA+H G++ E+ E + R + + EA+E+G+ID++L
Sbjct: 135 GQASDIFIHAEEMRRTKHRMTRLYAEHCGRSYEEFERAMDRDHFMTAEEALEWGLIDRIL 194
Query: 275 YTEKSPEDHGV 285
+ + G+
Sbjct: 195 QVREDEQPLGL 205
>gi|261210563|ref|ZP_05924856.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341]
gi|262404275|ref|ZP_06080830.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586]
gi|424591588|ref|ZP_18031015.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1037(10)]
gi|260840348|gb|EEX66919.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341]
gi|262349307|gb|EEY98445.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586]
gi|408031447|gb|EKG68069.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1037(10)]
Length = 208
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L +L A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PLEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|389774765|ref|ZP_10192884.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
gi|388438364|gb|EIL95119.1| ATP-dependent Clp protease proteolytic subunit [Rhodanobacter
spathiphylli B39]
Length = 209
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L V LI+A+ L+L+ E+ +K I YINS G
Sbjct: 19 TARGERSYDIYSRLLKERVIFLVGEVNDQVANLIVAQMLFLESENPDKDINFYINSPG-- 76
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G T AIYD M ++KP + T+C+G A + LL AGAKG R ALP+S IMI
Sbjct: 77 ------GAVTAGLAIYDTMQFIKPNVSTMCIGQACSMGSFLLMAGAKGKRFALPNSRIMI 130
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP G +GQATD+EI +E+ ++ L KLY +H G+ E+IE D+ R ++ + +A
Sbjct: 131 HQPSGGAQGQATDIEIQAREILYIRERLNKLYVEHTGQPLEKIELDMERDRFMNAVDAKA 190
Query: 267 YGIIDKVL 274
YG+ID+VL
Sbjct: 191 YGLIDEVL 198
>gi|148381180|ref|YP_001255721.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|153933152|ref|YP_001385555.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 19397]
gi|153934525|ref|YP_001388961.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. Hall]
gi|153939192|ref|YP_001392582.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum F str. Langeland]
gi|168179119|ref|ZP_02613783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|168183548|ref|ZP_02618212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|170754567|ref|YP_001782870.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum B1 str. Okra]
gi|226950659|ref|YP_002805750.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A2 str. Kyoto]
gi|237796687|ref|YP_002864239.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum Ba4 str. 657]
gi|384463549|ref|YP_005676144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|387819501|ref|YP_005679848.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|421839011|ref|ZP_16272698.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|429247534|ref|ZP_19210776.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
gi|166201814|sp|A7FYI2.1|CLPP_CLOB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201815|sp|A5I6W1.1|CLPP_CLOBH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201816|sp|A7GIH2.1|CLPP_CLOBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706445|sp|B1IND7.1|CLPP_CLOBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763786|sp|C1FLA6.1|CLPP_CLOBJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148290664|emb|CAL84793.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|152929196|gb|ABS34696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 19397]
gi|152930439|gb|ABS35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. Hall]
gi|152935088|gb|ABS40586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. Langeland]
gi|169119779|gb|ACA43615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B1 str. Okra]
gi|182670165|gb|EDT82141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|182673367|gb|EDT85328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|226842960|gb|ACO85626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A2 str. Kyoto]
gi|229261301|gb|ACQ52334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Ba4 str. 657]
gi|295320566|gb|ADG00944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|322807545|emb|CBZ05120.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
gi|409736336|gb|EKN37768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001627]
gi|428755428|gb|EKX78057.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum CFSAN001628]
Length = 194
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI+ L + LI+A+ L+L+ ED +K I+LYINS G G
Sbjct: 19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+CVG A A LL AGAKG R ALP+S +MI QP+G
Sbjct: 71 ITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFR 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+ I + + +K +L + + GK EQ+E D R + S EA EYG+ID+V+
Sbjct: 131 GQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVI 190
Query: 275 YTEK 278
+K
Sbjct: 191 DKKK 194
>gi|88809960|ref|ZP_01125465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
gi|88786150|gb|EAR17312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
Length = 229
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 115/193 (59%), Gaps = 11/193 (5%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 46 DIYSRLLRERIIFLGTGVDDAVADALVAQLLFLEAEDPEKDIQVYINSPG--------GS 97
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALP++ IMI QP+G +
Sbjct: 98 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQ 157
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ ++I D R + SPSEAV+YG+ID+V+
Sbjct: 158 GQAVDIEIQAKEILFLKETLNGLMAEHTGQPLDKIAEDTDRDYFLSPSEAVDYGLIDRVV 217
Query: 275 YTEKSPEDHGVVS 287
S +D G+++
Sbjct: 218 ---DSLKDGGIIT 227
>gi|429728764|ref|ZP_19263468.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
gi|429147739|gb|EKX90761.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptostreptococcus anaerobius VPI 4330]
Length = 217
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RI++LG L++A+ L+L+ +D +K I+LYINS G G
Sbjct: 42 DIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDIHLYINSPG--------GS 93
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+K + T+CVG A A LL AGAKG R ALP+ST+MI QP+G
Sbjct: 94 VTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTVMIHQPLGGTR 153
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI K + ++K +L K+ A+ G+ E ++A+ R + + EA ++G+ID+V+
Sbjct: 154 GQATDIEIHTKYLLSIKEKLNKILAERTGQDLETVKANTERDNFMTADEARDFGLIDEVI 213
>gi|121727845|ref|ZP_01680912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229507982|ref|ZP_04397487.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229511781|ref|ZP_04401260.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229515308|ref|ZP_04404768.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229518918|ref|ZP_04408361.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229523942|ref|ZP_04413347.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229529052|ref|ZP_04418442.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229607528|ref|YP_002878176.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254849010|ref|ZP_05238360.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255745319|ref|ZP_05419268.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262156043|ref|ZP_06029163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|262167884|ref|ZP_06035584.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|297579440|ref|ZP_06941368.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|298498040|ref|ZP_07007847.1| clp protease [Vibrio cholerae MAK 757]
gi|360035805|ref|YP_004937568.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741755|ref|YP_005333724.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
IEC224]
gi|384424912|ref|YP_005634270.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
LMA3984-4]
gi|417813967|ref|ZP_12460620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-49A2]
gi|417817704|ref|ZP_12464333.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HCUF01]
gi|417821275|ref|ZP_12467889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE39]
gi|417825143|ref|ZP_12471731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE48]
gi|418334942|ref|ZP_12943856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-06A1]
gi|418338559|ref|ZP_12947453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-23A1]
gi|418346477|ref|ZP_12951239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-28A1]
gi|418350239|ref|ZP_12954970.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43A1]
gi|418355975|ref|ZP_12958694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A1]
gi|419826901|ref|ZP_14350400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1033(6)]
gi|419830397|ref|ZP_14353882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-1A2]
gi|419834076|ref|ZP_14357531.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A2]
gi|419837652|ref|ZP_14361090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46B1]
gi|421318223|ref|ZP_15768791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1032(5)]
gi|421321694|ref|ZP_15772247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1038(11)]
gi|421325493|ref|ZP_15776017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1041(14)]
gi|421329155|ref|ZP_15779665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1042(15)]
gi|421333063|ref|ZP_15783540.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1046(19)]
gi|421336651|ref|ZP_15787112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1048(21)]
gi|421340082|ref|ZP_15790514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-20A2]
gi|421344701|ref|ZP_15795104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43B1]
gi|421348140|ref|ZP_15798517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46A1]
gi|421351663|ref|ZP_15802028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-25]
gi|421354596|ref|ZP_15804928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-45]
gi|422897029|ref|ZP_16934479.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-40A1]
gi|422903231|ref|ZP_16938207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48A1]
gi|422907115|ref|ZP_16941919.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-70A1]
gi|422909692|ref|ZP_16944335.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-09]
gi|422913962|ref|ZP_16948468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HFU-02]
gi|422917778|ref|ZP_16952096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02A1]
gi|422923227|ref|ZP_16956385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae BJG-01]
gi|422926168|ref|ZP_16959182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-38A1]
gi|423145487|ref|ZP_17133081.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-19A1]
gi|423150163|ref|ZP_17137477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-21A1]
gi|423153983|ref|ZP_17141164.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-22A1]
gi|423157067|ref|ZP_17144160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-32A1]
gi|423160637|ref|ZP_17147577.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-33A2]
gi|423165457|ref|ZP_17152186.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48B2]
gi|423731474|ref|ZP_17704777.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A1]
gi|423735604|ref|ZP_17708801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41B1]
gi|423768488|ref|ZP_17712902.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A2]
gi|423822683|ref|ZP_17716693.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55C2]
gi|423856424|ref|ZP_17720500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59A1]
gi|423882950|ref|ZP_17724087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-60A1]
gi|423895365|ref|ZP_17727112.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62A1]
gi|423930803|ref|ZP_17731506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-77A1]
gi|423956436|ref|ZP_17734990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-40]
gi|423985222|ref|ZP_17738539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-46]
gi|423998208|ref|ZP_17741460.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02C1]
gi|424002918|ref|ZP_17745993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A2]
gi|424006707|ref|ZP_17749677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-37A1]
gi|424009944|ref|ZP_17752881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-44C1]
gi|424017101|ref|ZP_17756930.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55B2]
gi|424020026|ref|ZP_17759812.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59B1]
gi|424024688|ref|ZP_17764339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62B1]
gi|424027573|ref|ZP_17767176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-69A1]
gi|424586845|ref|ZP_18026424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1030(3)]
gi|424595492|ref|ZP_18034813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1040(13)]
gi|424599408|ref|ZP_18038589.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
Cholerae CP1044(17)]
gi|424602129|ref|ZP_18041271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1047(20)]
gi|424607100|ref|ZP_18046044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1050(23)]
gi|424610923|ref|ZP_18049762.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-39A1]
gi|424613736|ref|ZP_18052524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41A1]
gi|424617716|ref|ZP_18056388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-42A1]
gi|424622495|ref|ZP_18061003.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-47A1]
gi|424625394|ref|ZP_18063855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A1]
gi|424629880|ref|ZP_18068167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-51A1]
gi|424633923|ref|ZP_18072023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-52A1]
gi|424637005|ref|ZP_18075013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55A1]
gi|424640914|ref|ZP_18078797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A1]
gi|424645459|ref|ZP_18083195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A2]
gi|424648982|ref|ZP_18086645.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A1]
gi|424653228|ref|ZP_18090608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A2]
gi|424659631|ref|ZP_18096880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-16]
gi|429887950|ref|ZP_19369454.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
PS15]
gi|440710125|ref|ZP_20890776.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
4260B]
gi|443504285|ref|ZP_21071243.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-64A1]
gi|443508183|ref|ZP_21074946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-65A1]
gi|443512025|ref|ZP_21078663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-67A1]
gi|443515583|ref|ZP_21082094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-68A1]
gi|443519377|ref|ZP_21085773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-71A1]
gi|443524267|ref|ZP_21090480.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-72A2]
gi|443527901|ref|ZP_21093950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-78A1]
gi|443531864|ref|ZP_21097878.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-7A1]
gi|443535661|ref|ZP_21101539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-80A1]
gi|443539208|ref|ZP_21105062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-81A1]
gi|449055648|ref|ZP_21734316.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. Inaba G4222]
gi|121629881|gb|EAX62295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229332826|gb|EEN98312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229337523|gb|EEO02540.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229343607|gb|EEO08582.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229348013|gb|EEO12972.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229351746|gb|EEO16687.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229355487|gb|EEO20408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229370183|gb|ACQ60606.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254844715|gb|EET23129.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255737149|gb|EET92545.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262023611|gb|EEY42312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|262030221|gb|EEY48865.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|297537034|gb|EFH75867.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|297542373|gb|EFH78423.1| clp protease [Vibrio cholerae MAK 757]
gi|327484465|gb|AEA78872.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
LMA3984-4]
gi|340036453|gb|EGQ97429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-49A2]
gi|340037427|gb|EGQ98402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HCUF01]
gi|340038906|gb|EGQ99880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE39]
gi|340046628|gb|EGR07558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE48]
gi|341621322|gb|EGS47068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-70A1]
gi|341621465|gb|EGS47210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48A1]
gi|341622390|gb|EGS48053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-40A1]
gi|341634452|gb|EGS59210.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-09]
gi|341636660|gb|EGS61354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02A1]
gi|341637623|gb|EGS62301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HFU-02]
gi|341644319|gb|EGS68544.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae BJG-01]
gi|341646374|gb|EGS70488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-38A1]
gi|356417651|gb|EHH71266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-06A1]
gi|356418523|gb|EHH72120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-21A1]
gi|356423097|gb|EHH76558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-19A1]
gi|356428543|gb|EHH81769.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-22A1]
gi|356430201|gb|EHH83410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-23A1]
gi|356433556|gb|EHH86745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-28A1]
gi|356439724|gb|EHH92689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-32A1]
gi|356444735|gb|EHH97544.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43A1]
gi|356445734|gb|EHH98536.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-33A2]
gi|356450978|gb|EHI03683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-48B2]
gi|356452473|gb|EHI05152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A1]
gi|356646959|gb|AET27014.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. 2010EL-1786]
gi|378795265|gb|AFC58736.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
IEC224]
gi|395916481|gb|EJH27311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1032(5)]
gi|395917331|gb|EJH28159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1041(14)]
gi|395918688|gb|EJH29512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1038(11)]
gi|395927689|gb|EJH38452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1042(15)]
gi|395928465|gb|EJH39218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1046(19)]
gi|395931750|gb|EJH42494.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1048(21)]
gi|395939365|gb|EJH50047.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-20A2]
gi|395940781|gb|EJH51462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-43B1]
gi|395942719|gb|EJH53395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46A1]
gi|395952108|gb|EJH62722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-25]
gi|395953721|gb|EJH64334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-45]
gi|395958922|gb|EJH69377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A2]
gi|395959527|gb|EJH69955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A2]
gi|395962173|gb|EJH72474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-42A1]
gi|395970884|gb|EJH80601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-47A1]
gi|395973487|gb|EJH83046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1030(3)]
gi|395975870|gb|EJH85344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1047(20)]
gi|408007245|gb|EKG45338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-39A1]
gi|408012536|gb|EKG50313.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A1]
gi|408013145|gb|EKG50890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41A1]
gi|408018228|gb|EKG55687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-52A1]
gi|408023467|gb|EKG60630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-56A1]
gi|408024055|gb|EKG61191.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55A1]
gi|408032385|gb|EKG68971.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1040(13)]
gi|408032931|gb|EKG69500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-57A1]
gi|408041791|gb|EKG77885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
Cholerae CP1044(17)]
gi|408043275|gb|EKG79281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1050(23)]
gi|408051987|gb|EKG87053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-16]
gi|408055233|gb|EKG90172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-51A1]
gi|408607691|gb|EKK81094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae CP1033(6)]
gi|408620170|gb|EKK93182.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-1A2]
gi|408624096|gb|EKK97048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A1]
gi|408629787|gb|EKL02456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-41B1]
gi|408633769|gb|EKL06070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-50A2]
gi|408634659|gb|EKL06894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55C2]
gi|408640712|gb|EKL12498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59A1]
gi|408641074|gb|EKL12855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-60A1]
gi|408648898|gb|EKL20215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-61A2]
gi|408654235|gb|EKL25377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-77A1]
gi|408655165|gb|EKL26290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62A1]
gi|408657620|gb|EKL28698.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-40]
gi|408664453|gb|EKL35290.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HE-46]
gi|408845315|gb|EKL85431.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-37A1]
gi|408846088|gb|EKL86200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-17A2]
gi|408852563|gb|EKL92385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-02C1]
gi|408856200|gb|EKL95895.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-46B1]
gi|408860012|gb|EKL99666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-55B2]
gi|408863739|gb|EKM03213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-44C1]
gi|408867120|gb|EKM06482.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-59B1]
gi|408870398|gb|EKM09678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-62B1]
gi|408878876|gb|EKM17869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-69A1]
gi|429224949|gb|EKY31247.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
PS15]
gi|439974348|gb|ELP50525.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
4260B]
gi|443431230|gb|ELS73782.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-64A1]
gi|443435125|gb|ELS81269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-65A1]
gi|443439008|gb|ELS88723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-67A1]
gi|443442993|gb|ELS96295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-68A1]
gi|443446795|gb|ELT03451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-71A1]
gi|443449601|gb|ELT09892.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-72A2]
gi|443453773|gb|ELT17591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-78A1]
gi|443457254|gb|ELT24651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-7A1]
gi|443461201|gb|ELT32274.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-80A1]
gi|443465308|gb|ELT39968.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae HC-81A1]
gi|448264687|gb|EMB01924.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
str. Inaba G4222]
Length = 208
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 9/210 (4%)
Query: 66 SFCKSKPRSPVITMVIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEF 124
S+ + SP+ ++P T+ + D+ S L K R+++L + L++A+
Sbjct: 2 SYQEKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61
Query: 125 LYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEA 184
L+L+ E+ +K I+LYINS G G T +IYD M ++KP + T+C+G A
Sbjct: 62 LFLESENPDKDIFLYINSPG--------GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMG 113
Query: 185 ALLLGAGAKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGK 244
A LL GA G R LP+S +MI QP+G +GQA+D++I +E+ +K +L +L A+H G+
Sbjct: 114 AFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQ 173
Query: 245 TPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
E IE D R + S +AVEYG++D VL
Sbjct: 174 PIEVIERDTDRDNFMSADQAVEYGLVDAVL 203
>gi|423013864|ref|ZP_17004585.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans AXX-A]
gi|338783358|gb|EGP47726.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans AXX-A]
Length = 197
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E+ KPI+LYINS G G
Sbjct: 19 DIYSRLLRERIIFLSGEVNDAVSALVCAQLLFLEAENPGKPIHLYINSPG--------GV 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T A+YD M ++K P+ TLC+G A + LL AG G RAAL ++++ + QP+G +
Sbjct: 71 ITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGKRAALANASLHVHQPLGGFQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+DV I +EM+ K +++LYA+H G++ + +E + R +Y S EAV++G+ID V+
Sbjct: 131 GQASDVLIHAEEMQRTKQRIIRLYAEHCGRSYDDVERSLDRDRYMSAEEAVQWGLIDHVM 190
>gi|308050308|ref|YP_003913874.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
gi|307632498|gb|ADN76800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
Length = 207
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 11/203 (5%)
Query: 72 PRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYED 131
P + +I MV+ TA + D+ S L K R+++L + L++A+ L+L+ E+
Sbjct: 8 PLNALIPMVV---EQTAKGERSYDIYSRLLKERVIFLTGPVEDHMANLVVAQLLFLESEN 64
Query: 132 VEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAG 191
+K IYLYINS G G T +IYD M ++KP + T+C+G A A LL G
Sbjct: 65 PDKDIYLYINSPG--------GSVTAGMSIYDTMQFIKPDVSTVCMGQAASMGAFLLAGG 116
Query: 192 AKGNRAALPSSTIMIKQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEA 251
AKG R LP+S +MI QP+G +GQA+D+ I +E+ +K +L L A+H G+ E IE
Sbjct: 117 AKGKRHVLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLLLAEHTGQPMEVIER 176
Query: 252 DIRRPKYFSPSEAVEYGIIDKVL 274
D R + S ++AVEYG++D VL
Sbjct: 177 DTDRDNFMSATDAVEYGLVDSVL 199
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 108/180 (60%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++LG +V + ++A+ L+L+ ED EK I +YINS G G
Sbjct: 53 DIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQIYINSPG--------GS 104
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M V P + T+C G A A LL G KG R ALPS+ IMI QP+G +
Sbjct: 105 VTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQ 164
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI KE+ +K L L A+H G+ E+I D R + SP+EAV+YG+ID+V+
Sbjct: 165 GQAVDIEIQAKEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVDYGLIDRVV 224
>gi|443312110|ref|ZP_21041730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442777788|gb|ELR88061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 202
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RIV+LG ++ LI+A+ L+L ED EK I+LYINS G G
Sbjct: 17 DIYSRLLRERIVFLGQKVDSNLANLIVAQLLFLDAEDAEKDIFLYINSPG--------GS 68
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T I+D + +++P + T+C G A A LL AG KG R +LP+S IMI QP+G +
Sbjct: 69 VTAGMGIFDTIKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQPLGGAQ 128
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQATD+EI KE+ K +L + A+H G+ E+I D R + SP+EA +YG+ID+V+
Sbjct: 129 GQATDIEIQAKEILYHKRKLNEHLAEHTGQPLEKIAEDTERDFFMSPTEAKDYGLIDQVI 188
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 111/181 (61%), Gaps = 8/181 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K+RIV++G S+ L++A+ L+L+ ED +K IYLYINS G G
Sbjct: 19 DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDIYLYINSPG--------GS 70
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T AIYD M Y+KP + T+C+G A A+LL GA G R ALP+S IMI QP G ++
Sbjct: 71 VTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRIMIHQPWGGVQ 130
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
G+A D+E KE+ ++ L ++ KH + E+IE D R + S EA +YG+ID+V+
Sbjct: 131 GRALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEAKQYGLIDEVI 190
Query: 275 Y 275
Y
Sbjct: 191 Y 191
>gi|308798991|ref|XP_003074276.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
gi|116000447|emb|CAL50127.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
Length = 742
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 110/180 (61%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L K RIV++ + + L +A+ L+L+ PI++Y+NS G G
Sbjct: 561 DIYSRLLKERIVFINGPIDDTASSLAVAQLLFLESASPTAPIWMYVNSPG--------GS 612
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T IYD M YV PPI TLCVG A A+LLL AGAKG R +LP+S +M+ QP G
Sbjct: 613 VTAGLGIYDTMQYVSPPIHTLCVGQASSMASLLLAAGAKGERRSLPNSRVMLHQPSGGAS 672
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E+ NV+ +L+ +Y KH + ++I + R + SPS+A+E+G+ID+V+
Sbjct: 673 GQASDIAIHAQEILNVREKLIHIYMKHTNQEYDKIGMTLERDTFMSPSDALEFGLIDEVI 732
>gi|357511831|ref|XP_003626204.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
gi|217074128|gb|ACJ85424.1| unknown [Medicago truncatula]
gi|355501219|gb|AES82422.1| ATP-dependent Clp protease proteolytic subunit-related protein
[Medicago truncatula]
Length = 322
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 111/175 (63%), Gaps = 3/175 (1%)
Query: 104 RIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKG-GEKLGYETEAFAIY 162
RIVY+GM VP+VTEL++AE ++LQ+ ++PIY+YINSTGTT+ GE + E+E FAIY
Sbjct: 119 RIVYIGMPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEGFAIY 178
Query: 163 DVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIEG--QATDV 220
D M +K I T+ +G A G+A LLL AG KG R P + MI+QP G A+DV
Sbjct: 179 DAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQPRVPSSGLRPASDV 238
Query: 221 EIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLY 275
I KE+ + LVKL AKH + E + ++R Y A E+G+IDK+L+
Sbjct: 239 LIHAKEVMVNRDTLVKLLAKHTENSEETVSNVMKRSYYMDALLAKEFGVIDKILW 293
>gi|15966977|ref|NP_387330.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti 1021]
gi|334317923|ref|YP_004550542.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti AK83]
gi|384531048|ref|YP_005715136.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti BL225C]
gi|384537763|ref|YP_005721848.1| ATP-dependent Clp protease, proteolytic subunit [Sinorhizobium
meliloti SM11]
gi|407722234|ref|YP_006841896.1| ATP-dependent Clp protease proteolytic subunit 1 [Sinorhizobium
meliloti Rm41]
gi|433614997|ref|YP_007191795.1| Protease subunit of ATP-dependent Clp protease [Sinorhizobium
meliloti GR4]
gi|18202305|sp|P58277.1|CLPP1_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15076250|emb|CAC47803.1| Probable ATP-dependent CLP protease proteolytic subunit
[Sinorhizobium meliloti 1021]
gi|333813224|gb|AEG05893.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti BL225C]
gi|334096917|gb|AEG54928.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti AK83]
gi|336034655|gb|AEH80587.1| ATP-dependent Clp protease, proteolytic subunit [Sinorhizobium
meliloti SM11]
gi|407320466|emb|CCM69070.1| ATP-dependent Clp protease proteolytic subunit 1 [Sinorhizobium
meliloti Rm41]
gi|429553187|gb|AGA08196.1| Protease subunit of ATP-dependent Clp protease [Sinorhizobium
meliloti GR4]
Length = 205
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 116/184 (63%), Gaps = 9/184 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
D+ S L + RI++L +V+ L+ A+ L+L+ E +KPI LYINS G G
Sbjct: 23 DIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESPKKPIQLYINSPG--------GV 74
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
T FA+YD M Y++ P+ TLC+G A + LL AG G R ALP+++I++ QP G +
Sbjct: 75 VTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGERTALPNASILVHQPSGGFQ 134
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA+D+ I +E++ K + +LYA+H G+T E+ E + R ++ + EA+E+G+ID+++
Sbjct: 135 GQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMTAEEALEWGLIDRII 194
Query: 275 YTEK 278
TE+
Sbjct: 195 -TER 197
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 95 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGY 154
DL S L K RI+++G V ++A+ LYLQ ED K I +YINS G G
Sbjct: 41 DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQMYINSPG--------GV 92
Query: 155 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMIKQPIGRIE 214
AIYD M +++P + T C+G A A++L AG KG R LP+ST++I QP+G E
Sbjct: 93 IYAGLAIYDTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVLIHQPLGGAE 152
Query: 215 GQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVEYGIIDKVL 274
GQA D+EI +E+ ++ L ++ AKH G+T E+I D R Y S +AVEYG++D VL
Sbjct: 153 GQAADIEITAREILRLRRNLYEILAKHTGQTIERIMQDSDRNYYLSAQQAVEYGLVDDVL 212
>gi|120554758|ref|YP_959109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|387813879|ref|YP_005429362.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|120324607|gb|ABM18922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|381338892|emb|CCG94939.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 211
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 8/188 (4%)
Query: 87 TAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTT 146
TA + D+ S L K R+++L + L++A+ L+L+ E+ +K I+LYINS G
Sbjct: 25 TARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQLLFLESENPDKDIHLYINSPG-- 82
Query: 147 KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLGAGAKGNRAALPSSTIMI 206
G + +IYD M +VKP + TLC+G A A LL GAKG RA LP S +MI
Sbjct: 83 ------GSVSAGMSIYDTMQFVKPDVATLCIGQAASMGAFLLSGGAKGKRACLPHSRVMI 136
Query: 207 KQPIGRIEGQATDVEIARKEMKNVKAELVKLYAKHFGKTPEQIEADIRRPKYFSPSEAVE 266
QP+G +GQATD+EI +E+ ++ L +L A+H G+ E I D R + P++A E
Sbjct: 137 HQPLGGYQGQATDIEIHTREILKIRNTLNELLAEHTGQDIETIARDTDRDNFMDPAQAKE 196
Query: 267 YGIIDKVL 274
YG+ID +L
Sbjct: 197 YGLIDTIL 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,827,242,309
Number of Sequences: 23463169
Number of extensions: 209429698
Number of successful extensions: 607184
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5829
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 594677
Number of HSP's gapped (non-prelim): 6257
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)