Query 022572
Match_columns 295
No_of_seqs 177 out of 300
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 04:34:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022572.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022572hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3117 Protein involved in rR 100.0 1.1E-51 2.5E-56 382.4 20.0 261 2-272 22-311 (340)
2 PF04000 Sas10_Utp3: Sas10/Utp 99.7 9.7E-18 2.1E-22 129.2 9.1 77 2-78 6-85 (85)
3 KOG4835 DNA-binding protein C1 97.8 5.3E-05 1.1E-09 65.3 7.3 54 34-87 48-101 (144)
4 KOG3118 Disrupter of silencing 97.6 7.1E-05 1.5E-09 75.0 5.3 93 2-94 241-338 (517)
5 PF10303 DUF2408: Protein of u 74.4 14 0.0003 31.6 7.0 75 5-79 43-124 (134)
6 PHA03225 DNA packaging protein 66.7 12 0.00026 31.8 4.8 39 40-78 68-112 (125)
7 PF03581 Herpes_UL33: Herpesvi 52.6 34 0.00074 26.7 4.8 40 40-79 25-66 (75)
8 PF07030 DUF1320: Protein of u 34.6 1E+02 0.0022 25.7 5.4 45 34-79 57-101 (130)
9 KOG3651 Protein kinase C, alph 33.3 68 0.0015 31.7 4.6 33 64-96 288-325 (429)
10 PF12432 DUF3677: Protein of u 30.9 45 0.00097 26.1 2.5 44 35-78 26-69 (83)
11 COG4477 EzrA Negative regulato 30.7 2.3E+02 0.005 29.9 8.1 92 6-102 142-241 (570)
12 PHA03236 DNA packaging protein 25.1 1.4E+02 0.0031 25.5 4.7 16 40-55 64-79 (127)
13 PHA01810 hypothetical protein 22.3 1.9E+02 0.0041 22.9 4.5 49 9-57 16-65 (100)
14 PHA03229 DNA packaging protein 21.9 1.6E+02 0.0035 25.4 4.4 16 40-55 70-85 (132)
No 1
>KOG3117 consensus Protein involved in rRNA processing [RNA processing and modification]
Probab=100.00 E-value=1.1e-51 Score=382.37 Aligned_cols=261 Identities=31% Similarity=0.449 Sum_probs=198.4
Q ss_pred cchHHHHHHHHHHHHHHhhcCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHhhh
Q 022572 2 KEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGH-PVVQSLVEIRLFLEKIR 80 (295)
Q Consensus 2 k~~l~~v~~~v~pll~~vk~~~~~~~~GislL~~K~~lLLsY~~~L~~ylllK~~g~si~~h-pvv~rLve~R~~LEKir 80 (295)
.+.++.+.-.++.|++.+..+..++.+|+|||++||++||+|++.|+|+|+-|+.|.++..| |+|.|||++|++||||+
T Consensus 22 ~~q~~~~~k~~~~l~e~l~~ta~~~e~gvSlLsLKnqlll~Yl~~Lt~Lil~klddes~~~h~daveRlvqhRvvlEKir 101 (340)
T KOG3117|consen 22 SNQMDVLNKSIQTLLEALPKTASSSEDGVSLLSLKNQLLLSYLQKLTFLILVKLDDESFLQHQDAVERLVQHRVVLEKIR 101 (340)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccCceeeeechHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHhcc
Confidence 35678888899999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred hhHHhhHHHHHHHHhhhhcCCCcCCCCCC---CCCCCCCcccccccccCCCcccccccCC------------CCC-----
Q 022572 81 PIDRKLQYQIQKLTSVRVGGNAIEPVNPS---ANESGEPQKTEDLLKYRPNPDMLVSKTD------------MTT----- 140 (295)
Q Consensus 81 Ple~KL~yQIdKLl~~~a~~~~~~~~~~~---~~~~~~~~~~~D~L~~rPnp~~l~~~~~------------~~~----- 140 (295)
|||+||+||||||| +++++++...... +++........-.+.|+||.+.+....+ +.+
T Consensus 102 PLE~KlkyQiDKLl--raav~~es~~sn~e~r~n~~~~l~n~s~~~~~~~~~s~~~~~sd~peeee~edde~~ksa~~~e 179 (340)
T KOG3117|consen 102 PLENKLKYQIDKLL--RAAVRKESIGSNKEPRNNGNDKLSNMSLKLHYKPNLSEFADDSDGPEEEENEDDEDDKSAISSE 179 (340)
T ss_pred cHHHHHHHHHHHHH--HHHhhhcccccccccccCCCCcccccccccccCcccccccccccCcccccccccccccccccch
Confidence 99999999999999 6665444322111 1111111111123445555555443321 110
Q ss_pred -------CCCCccccCCCCCCCccccchhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCchhhhcccchhHHhhH
Q 022572 141 -------EDGAGVYKPPKFAPASMDEDKTSRKERNALRKEKETLRQARQSTFMRELVNDLEGRPEEVREVVGVESRELTR 213 (295)
Q Consensus 141 -------~~~~gvYrPPKia~~~~~~~~~~~~er~~~r~ek~~~rra~~S~~m~el~~e~sd~PeE~~~~~g~~~~~~~r 213 (295)
...+|+|+||||.||.|++. +..+.++.. .++ ..|++++|++|+||..+|||+|+|+.. ..+....|
T Consensus 180 ~~~ee~~~~e~gkYvpPRI~aV~~d~~-te~er~nk~-~E~-akrsamSssvi~elk~q~SDapeeir~---~~~~k~~R 253 (340)
T KOG3117|consen 180 DEEEELRSAEDGKYVPPRIRAVTYDEK-TERERPNKL-VEE-AKRSAMSSSVIQELKSQYSDAPEEIRG---RVIHKDER 253 (340)
T ss_pred hhhhhhcccccCcccCCceeeecCchh-hhhcchhHH-HHH-HHHHhhhHHHHHHHHHhccccchhhhh---cccchhHH
Confidence 12369999999999999932 222222222 232 348899999999999999999998763 32334456
Q ss_pred HHHHHHHHHHHhhhcccccC-CCHHHHHHhhhhHhhhcCccCccccccccccCCCCCccC
Q 022572 214 YKEMMEERARQEEELFTRAP-LTKMEKKKMKHLKKSRNGLLGLTESFYDEIKSLPIEEKD 272 (295)
Q Consensus 214 ~~~~~~Er~~yEE~nftRLp-~sKkeKkr~K~~~~~~n~~~g~~~~~f~d~~~l~~~~~~ 272 (295)
+.++++++..|||+|||||| +||++|+++||.++ +.-++.+|+||+|+++|+.|-..
T Consensus 254 ~~qk~rrri~yEEsnftRL~~lsK~ekrksKr~~r--~~~~~~~~s~~eDfsals~g~~~ 311 (340)
T KOG3117|consen 254 ELQKMRRRIEYEESNFTRLPKLSKKEKRKSKRVKR--HDYGGEDLSLDEDFSALSLGLTR 311 (340)
T ss_pred HHHHHHHhhhhhhhhhhhhhhccHHHHHHHHHhhh--hhccccccccccchhhhcccccc
Confidence 67778888899999999999 79999999999755 45567788899999999886554
No 2
>PF04000 Sas10_Utp3: Sas10/Utp3/C1D family; InterPro: IPR007146 This family contains Utp3 and LCP5 which are components of the U3 ribonucleoprotein complex []. It also includes the Homo sapiens (Human) C1D protein and Saccharomyces cerevisiae (Baker's yeast) YHR081W (rrp47), an exosome-associated protein required for the 3' processing of stable RNAs [] and Sas10 which has been identified as a regulator of chromatin silencing []. This entry also includes the human protein Neuroguidin, an initiation factor 4E (eIF4E)-binding protein [].
Probab=99.74 E-value=9.7e-18 Score=129.24 Aligned_cols=77 Identities=42% Similarity=0.706 Sum_probs=73.3
Q ss_pred cchHHHHHHHHHHHHHHhh---cCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 022572 2 KEGLDKLRSKVQSLITKVK---GNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEK 78 (295)
Q Consensus 2 k~~l~~v~~~v~pll~~vk---~~~~~~~~GislL~~K~~lLLsY~~~L~~ylllK~~g~si~~hpvv~rLve~R~~LEK 78 (295)
..++.+|++.++++++.++ .+.+++.+|+||+.+|++++++||+|++||+++|+.|.++.+|||+++|+++|++|||
T Consensus 6 ~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~g~sl~~~K~~~llaY~~~~~~~~~lk~~g~~~~~hpv~~~L~r~r~~leK 85 (85)
T PF04000_consen 6 SESLDEVEESLQPLLEKVKEEKEEELSPSDGISLLQAKNQLLLAYIINLLFYMYLKLSGVDPKDHPVMKELVRIRQYLEK 85 (85)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHcC
Confidence 5689999999999999994 6778999999999999999999999999999999999999999999999999999986
No 3
>KOG4835 consensus DNA-binding protein C1D involved in regulation of double-strand break repair [Replication, recombination and repair]
Probab=97.85 E-value=5.3e-05 Score=65.26 Aligned_cols=54 Identities=30% Similarity=0.599 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhhhhhHHhhH
Q 022572 34 EAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQ 87 (295)
Q Consensus 34 ~~K~~lLLsY~~~L~~ylllK~~g~si~~hpvv~rLve~R~~LEKirPle~KL~ 87 (295)
..|-.+++.|.++.+||+.+++.|+...+|||...|-.+|++++|++.++.++.
T Consensus 48 qAKld~~~~ya~~sl~~~~l~~kG~da~dh~V~~EL~Rvk~y~~k~Kqi~d~~~ 101 (144)
T KOG4835|consen 48 QAKLDLTLAYAINSLFWSFLKLKGVDASDHPVLQELERVKVYMAKIKQINDRVK 101 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 589999999999999999999999999999999999999999999998887765
No 4
>KOG3118 consensus Disrupter of silencing SAS10 [Chromatin structure and dynamics]
Probab=97.62 E-value=7.1e-05 Score=75.04 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=85.7
Q ss_pred cchHHHHHHHHHHHHHHhhcC--CCCCCCCccHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Q 022572 2 KEGLDKLRSKVQSLITKVKGN--NYPTVDGISYLEAKHL---LLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFL 76 (295)
Q Consensus 2 k~~l~~v~~~v~pll~~vk~~--~~~~~~GislL~~K~~---lLLsY~~~L~~ylllK~~g~si~~hpvv~rLve~R~~L 76 (295)
+..|.++.+.++|++.++... .+|+..+-+||..... |++.||.+++|+++..+..++-..|+|..+||-++.++
T Consensus 241 k~~l~el~s~l~t~~~~l~~~~~~L~~gee~~~lr~hp~m~~l~~~ke~w~s~~~l~s~~~vts~~~~v~~~i~~~~k~~ 320 (517)
T KOG3118|consen 241 KDLLEELESKLNTYMSYLKELDEELPPGEEESLLRSHPNMAVLKVVKEDWLSFPLLDSVDRVTSDEAKVEVRIVLAEKQP 320 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhcCcchhhhhhhhhhhhhhccccccccccccccccchhhHhhhhhh
Confidence 457899999999999999977 7899999999999988 99999999999999999999999999999999999999
Q ss_pred HhhhhhHHhhHHHHHHHH
Q 022572 77 EKIRPIDRKLQYQIQKLT 94 (295)
Q Consensus 77 EKirPle~KL~yQIdKLl 94 (295)
.+|.-.+.+..--++++.
T Consensus 321 ~kldn~~~e~~e~g~k~k 338 (517)
T KOG3118|consen 321 MKLDNAREEKKEKGDKLK 338 (517)
T ss_pred hhhhhHHHHHHHhhhHHh
Confidence 999999888877777776
No 5
>PF10303 DUF2408: Protein of unknown function (DUF2408); InterPro: IPR018810 This entry represents a family of proteins conserved in fungi whose function is unknown.
Probab=74.38 E-value=14 Score=31.56 Aligned_cols=75 Identities=20% Similarity=0.297 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHh-hcCCCCCCC-CccHH--HHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHHHH
Q 022572 5 LDKLRSKVQSLITKV-KGNNYPTVD-GISYL--EAKHLLLLNYCQSIVYYLLRKAKG---LSIEGHPVVQSLVEIRLFLE 77 (295)
Q Consensus 5 l~~v~~~v~pll~~v-k~~~~~~~~-GislL--~~K~~lLLsY~~~L~~ylllK~~g---~si~~hpvv~rLve~R~~LE 77 (295)
|..+...+..+-..- .+|.|...+ |-..- ..=-.-||.=|.+|+.-++.+..+ .+-.-.|+-++|+.+|.-||
T Consensus 43 l~~lq~qL~eIe~~R~~DGKF~~~~~g~~~~~gQ~~l~~LLd~C~~li~dl~~~~~~~~~~~~~l~~iY~~L~~ik~~LE 122 (134)
T PF10303_consen 43 LKPLQEQLKEIESMRDVDGKFVSPDTGEVPPGGQAVLNGLLDDCFDLIEDLLERKGEEIEVDPSLQPIYDQLIDIKNTLE 122 (134)
T ss_pred HHHHHHHHHHHHHhccCCCCeeCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHH
Confidence 334444444444333 466665554 21111 122236888999999988888773 33334699999999999998
Q ss_pred hh
Q 022572 78 KI 79 (295)
Q Consensus 78 Ki 79 (295)
++
T Consensus 123 ~L 124 (134)
T PF10303_consen 123 NL 124 (134)
T ss_pred hh
Confidence 85
No 6
>PHA03225 DNA packaging protein UL33; Provisional
Probab=66.69 E-value=12 Score=31.85 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHh----cCCCCCCCH--HHHHHHHHHHHHHh
Q 022572 40 LLNYCQSIVYYLLRKA----KGLSIEGHP--VVQSLVEIRLFLEK 78 (295)
Q Consensus 40 LLsY~~~L~~ylllK~----~g~si~~hp--vv~rLve~R~~LEK 78 (295)
+||||+.|+-++-.+. .+.....|- +-.+.-..+.+|.|
T Consensus 68 yLs~tqrlasfl~h~~~~~~~~~~~C~H~~iL~~K~e~f~~VI~K 112 (125)
T PHA03225 68 YLAHTANLAAALRYDCAGDLDGGRMCAHAELIARRRERFAKILNK 112 (125)
T ss_pred HHHHHHHHHHHHHhccccCCCCCCcChhHHHHHHHHHHHHHHHHH
Confidence 5799999999998883 333345562 22333344444444
No 7
>PF03581 Herpes_UL33: Herpesvirus UL33-like protein; InterPro: IPR005208 This is a family of Herpesvirus proteins including UL33 P10217 from SWISSPROT,UL51 P16792 from SWISSPROT. The proteins in this family are involved in packaging viral DNA.; GO: 0019073 viral DNA genome packaging
Probab=52.57 E-value=34 Score=26.69 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCH--HHHHHHHHHHHHHhh
Q 022572 40 LLNYCQSIVYYLLRKAKGLSIEGHP--VVQSLVEIRLFLEKI 79 (295)
Q Consensus 40 LLsY~~~L~~ylllK~~g~si~~hp--vv~rLve~R~~LEKi 79 (295)
+||||+.|+-++-.+..+.....|- +-.+.-..+.+|.|+
T Consensus 25 ~Ln~~q~la~fl~~~~~~~~~C~H~~vl~~K~e~~~~vi~K~ 66 (75)
T PF03581_consen 25 YLNYCQRLASFLRHRHGQGAACEHGEVLERKRERFAQVINKF 66 (75)
T ss_pred HHHHHHHHHHHHHhccCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 5799999999988887766666663 223333444555443
No 8
>PF07030 DUF1320: Protein of unknown function (DUF1320); InterPro: IPR009752 This entry is represented by the Bacteriophage Mu, Gp36. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=34.61 E-value=1e+02 Score=25.75 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhh
Q 022572 34 EAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKI 79 (295)
Q Consensus 34 ~~K~~lLLsY~~~L~~ylllK~~g~si~~hpvv~rLve~R~~LEKi 79 (295)
..-..+|..+|..|+.|.|....+... .+++..+--.-..+|++|
T Consensus 57 ~~~p~~L~~~~~dIA~y~L~~~~~~~~-~e~~~~rY~~A~~~L~~i 101 (130)
T PF07030_consen 57 APVPALLKRIACDIARYRLYDRRPSQE-TEPVRERYKDAIKWLEDI 101 (130)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCccC-cHHHHHHHHHHHHHHHHH
Confidence 334567999999999999988777655 677777665555555554
No 9
>KOG3651 consensus Protein kinase C, alpha binding protein [Signal transduction mechanisms]
Probab=33.31 E-value=68 Score=31.68 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=25.9
Q ss_pred HHHHHHHHHHH-HHHhhhhhHHh----hHHHHHHHHhh
Q 022572 64 PVVQSLVEIRL-FLEKIRPIDRK----LQYQIQKLTSV 96 (295)
Q Consensus 64 pvv~rLve~R~-~LEKirPle~K----L~yQIdKLl~~ 96 (295)
....|..++|. |||||.=||+| +..|+.-|+++
T Consensus 288 eaRarF~kmR~DVleKmELLdqKHv~Di~~qL~~l~~t 325 (429)
T KOG3651|consen 288 EARARFMKMRDDVLEKMELLDQKHVRDIAQQLAILAKT 325 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 56777777775 89999999987 77788877754
No 10
>PF12432 DUF3677: Protein of unknown function (DUF3677) ; InterPro: IPR022145 This domain family is found in eukaryotes, and is approximately 80 amino acids in length.
Probab=30.91 E-value=45 Score=26.12 Aligned_cols=44 Identities=20% Similarity=0.204 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Q 022572 35 AKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEK 78 (295)
Q Consensus 35 ~K~~lLLsY~~~L~~ylllK~~g~si~~hpvv~rLve~R~~LEK 78 (295)
+.|.-+.-+.+.+..+++..+...+-++|.+++.|+++|.--..
T Consensus 26 lqn~kl~r~a~elL~~l~~n~~~~~~~D~e~i~~Llkl~lk~k~ 69 (83)
T PF12432_consen 26 LQNPKLQRPAQELLSSLCYNCDSHSPEDSEVIDNLLKLRLKSKA 69 (83)
T ss_pred hhccccchHHHHHHHHHHhcccCCchhhHHHHHHHHHHhhccch
Confidence 44445566677777777788888899999999999998764433
No 11
>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]
Probab=30.66 E-value=2.3e+02 Score=29.90 Aligned_cols=92 Identities=20% Similarity=0.233 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHH----HHHHHHHHHHh---
Q 022572 6 DKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQ----SLVEIRLFLEK--- 78 (295)
Q Consensus 6 ~~v~~~v~pll~~vk~~~~~~~~GislL~~K~~lLLsY~~~L~~ylllK~~g~si~~hpvv~----rLve~R~~LEK--- 78 (295)
..|.+.-+.|..-|-.+...-+.-+++|+.+-. +--..|.-|.-+.+.|.+|+.|-|+. .+..+|.++|+
T Consensus 142 ~~~~ely~elr~~vl~n~~~~Ge~~~~lEk~Le---~i~~~l~qf~~lt~~Gd~ieA~evl~~~ee~~~~L~~~~e~IP~ 218 (570)
T COG4477 142 DHVLELYEELRRDVLANRHQYGEAAPELEKKLE---NIEEELSQFVELTSSGDYIEAREVLEEAEEHMIALRSIMERIPS 218 (570)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHH---HHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444443333344666777776633 44567788999999999999988865 46778888888
Q ss_pred -hhhhHHhhHHHHHHHHhhhhcCCC
Q 022572 79 -IRPIDRKLQYQIQKLTSVRVGGNA 102 (295)
Q Consensus 79 -irPle~KL~yQIdKLl~~~a~~~~ 102 (295)
+.-+++-|.-|+++|= ..++++
T Consensus 219 L~~e~~~~lP~ql~~Lk--~Gyr~m 241 (570)
T COG4477 219 LLAELQTELPGQLQDLK--AGYRDM 241 (570)
T ss_pred HHHHHHhhchHHHHHHH--HHHHHH
Confidence 6777888888999887 555444
No 12
>PHA03236 DNA packaging protein UL33; Provisional
Probab=25.07 E-value=1.4e+02 Score=25.53 Aligned_cols=16 Identities=13% Similarity=0.239 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHh
Q 022572 40 LLNYCQSIVYYLLRKA 55 (295)
Q Consensus 40 LLsY~~~L~~ylllK~ 55 (295)
+||||+.|+-.+-.+.
T Consensus 64 yLs~tqrLasfl~h~~ 79 (127)
T PHA03236 64 YLSFTRRLASVLRHGR 79 (127)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 5789999998888764
No 13
>PHA01810 hypothetical protein
Probab=22.32 E-value=1.9e+02 Score=22.88 Aligned_cols=49 Identities=24% Similarity=0.339 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhh-cCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 022572 9 RSKVQSLITKVK-GNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKG 57 (295)
Q Consensus 9 ~~~v~pll~~vk-~~~~~~~~GislL~~K~~lLLsY~~~L~~ylllK~~g 57 (295)
++.++-+.+++. +-.+...+.|.+++.=.+|||.|..+++-++---+..
T Consensus 16 temlqlfnkliqwnpaytfdnainlvsacqqlllnynssvvqflndelnn 65 (100)
T PHA01810 16 TEMLQLFNKLIQWNPAYTFDNAINLVSACQQLLLNYNSSVVQFLNDELNN 65 (100)
T ss_pred HHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhcchHHHHHHHHHhcC
Confidence 344444444444 3334557889999999999999999988877655443
No 14
>PHA03229 DNA packaging protein UL33; Provisional
Probab=21.91 E-value=1.6e+02 Score=25.35 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHh
Q 022572 40 LLNYCQSIVYYLLRKA 55 (295)
Q Consensus 40 LLsY~~~L~~ylllK~ 55 (295)
+||||+.|+-.|-.+-
T Consensus 70 yLs~tqrLAsfl~h~~ 85 (132)
T PHA03229 70 YLSRTQRLASLLAYAG 85 (132)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 5799999998888763
Done!