Your job contains 1 sequence.
>022573
MIAKRMGRKSIVAATGAGQHGVATAAACAKLALDCTVFMGTADMEKQSSKVLLMKLLGAQ
VKAVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAME
KWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGV
YHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQR
LCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNYRYNQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022573
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1006230667 - symbol:AT5G28237 "AT5G28237" spec... 1142 7.1e-116 1
TAIR|locus:2005543 - symbol:TSB2 "tryptophan synthase bet... 1027 1.1e-103 1
TAIR|locus:2160190 - symbol:TSB1 "tryptophan synthase bet... 1020 6.0e-103 1
TIGR_CMR|DET_1487 - symbol:DET_1487 "tryptophan synthase,... 823 4.5e-82 1
TIGR_CMR|CHY_1582 - symbol:CHY_1582 "tryptophan synthase,... 788 2.3e-78 1
TIGR_CMR|BA_1253 - symbol:BA_1253 "tryptophan synthase, b... 774 7.1e-77 1
UNIPROTKB|P66984 - symbol:trpB "Tryptophan synthase beta ... 762 1.3e-75 1
TIGR_CMR|CJE_0397 - symbol:CJE_0397 "tryptophan synthase,... 752 1.5e-74 1
CGD|CAL0004378 - symbol:TRP5 species:5476 "Candida albica... 745 8.4e-74 1
UNIPROTKB|Q59KP3 - symbol:TRP5 "Likely tryptophan synthet... 745 8.4e-74 1
TIGR_CMR|SPO_0808 - symbol:SPO_0808 "tryptophan synthase,... 735 9.6e-73 1
SGD|S000002994 - symbol:TRP5 "Tryptophan synthase" specie... 735 9.6e-73 1
ASPGD|ASPL0000007723 - symbol:trpB species:162425 "Emeric... 726 8.6e-72 1
TIGR_CMR|SO_3023 - symbol:SO_3023 "tryptophan synthase, b... 722 2.3e-71 1
UNIPROTKB|P0A879 - symbol:trpB species:83333 "Escherichia... 720 3.7e-71 1
UNIPROTKB|P0A2K1 - symbol:trpB "Tryptophan synthase beta ... 719 4.8e-71 1
TIGR_CMR|CPS_3526 - symbol:CPS_3526 "tryptophan synthase,... 715 1.3e-70 1
POMBASE|SPAC19A8.15 - symbol:trp2 "tryptophan synthase (p... 705 1.4e-69 1
UNIPROTKB|Q9KST6 - symbol:trpB "Tryptophan synthase beta ... 701 3.8e-69 1
TIGR_CMR|VC_1170 - symbol:VC_1170 "tryptophan synthase, b... 701 3.8e-69 1
TIGR_CMR|CBU_1155 - symbol:CBU_1155 "N-(5'phosphoribosyl)... 676 1.7e-66 1
TIGR_CMR|CPS_1954 - symbol:CPS_1954 "tryptophan synthase,... 654 3.7e-64 1
ASPGD|ASPL0000031491 - symbol:AN5444 species:162425 "Emer... 407 5.5e-38 1
TIGR_CMR|GSU_2379 - symbol:GSU_2379 "pyridoxal-phosphate ... 193 2.8e-13 1
TIGR_CMR|CHY_0751 - symbol:CHY_0751 "putative tryptophan ... 176 3.9e-11 1
TAIR|locus:2159838 - symbol:TSBtype2 "tryptophan synthase... 168 5.1e-10 1
UNIPROTKB|Q3Z7P8 - symbol:trpB "Tryptophan synthase beta ... 160 3.7e-09 1
TIGR_CMR|DET_1035 - symbol:DET_1035 "pyridoxal-phosphate ... 160 3.7e-09 1
>TAIR|locus:1006230667 [details] [associations]
symbol:AT5G28237 "AT5G28237" species:3702 "Arabidopsis
thaliana" [GO:0000162 "tryptophan biosynthetic process"
evidence=ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004834 "tryptophan synthase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006568 "tryptophan
metabolic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] HAMAP:MF_00133 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR023026 PIRSF:PIRSF001413 PROSITE:PS00168
InterPro:IPR001926 Pfam:PF00291 EMBL:CP002688 SUPFAM:SSF53686
KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
IPI:IPI00548689 RefSeq:NP_974844.1 UniGene:At.44247
ProteinModelPortal:F4K727 PRIDE:F4K727 EnsemblPlants:AT5G28237.1
GeneID:2746023 KEGG:ath:AT5G28237 OMA:RDYVGRE Uniprot:F4K727
Length = 465
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 217/289 (75%), Positives = 249/289 (86%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
MI++R+G +VAATGAGQHGV VFMG AD+EKQS VL MKLLGAQ
Sbjct: 168 MISRRLGCSRVVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQ 227
Query: 61 VKAVDGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAME 120
V +V+G FK+ASSEAIRNWV NL +YYL+GTVVGPHPCPI+VREFQS+IGKETR+QA +
Sbjct: 228 VISVEGTFKDASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQ 287
Query: 121 KWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGEVGV 180
WGGKPDVL+ACVGSGSNALGLFHEF+ DEDVRL+GVEAAG GLDSGKH+ATLA G+VGV
Sbjct: 288 LWGGKPDVLVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGV 347
Query: 181 YHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQAYQR 240
YHG+MSYLLQD++GQIL HSVGVGLEYPGVGPEISF+++TGRAEFYTATD+EA+QA R
Sbjct: 348 YHGSMSYLLQDDQGQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQACMR 407
Query: 241 LCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVV 289
L RLEGI PALEASHALAFL+KL PTL +GAKVVVNCSG GDKD+DT++
Sbjct: 408 LSRLEGIIPALEASHALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLI 456
>TAIR|locus:2005543 [details] [associations]
symbol:TSB2 "tryptophan synthase beta-subunit 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004834 "tryptophan synthase activity"
evidence=IEA;ISS;IMP] [GO:0006568 "tryptophan metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0000162 "tryptophan
biosynthetic process" evidence=TAS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR023026 PIRSF:PIRSF001413 PROSITE:PS00168
UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF53686
EMBL:AL035680 EMBL:AL161566 GO:GO:0009941 EMBL:M81620 EMBL:BT003144
EMBL:AY084334 IPI:IPI00547656 PIR:JQ1073 PIR:T06037
RefSeq:NP_194437.1 UniGene:At.327 ProteinModelPortal:P25269
SMR:P25269 STRING:P25269 PaxDb:P25269 PRIDE:P25269
EnsemblPlants:AT4G27070.1 GeneID:828815 KEGG:ath:AT4G27070
TAIR:At4g27070 eggNOG:COG0133 HOGENOM:HOG000161710
InParanoid:P25269 KO:K01696 OMA:WVANVDS PhylomeDB:P25269
ProtClustDB:PLN02618 Genevestigator:P25269 GermOnline:AT4G27070
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
Uniprot:P25269
Length = 475
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 188/294 (63%), Positives = 238/294 (80%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKR+G+K I+A TGAGQHGV ++MG DME+Q+ V M+LLGA+
Sbjct: 179 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAE 238
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V+ V K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IGKETRKQ
Sbjct: 239 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 298
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
AMEKWGGKPDVL+ACVG GSNA+GLFHEF++D +VR+IGVEAAGFGLDSGKHAATL KG+
Sbjct: 299 AMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGD 358
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VGV HGAMSYLLQD++GQI+ HS+ GL+YPGVGPE SFL+D GRAE+++ TD+EA++A
Sbjct: 359 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEA 418
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 291
++R+ RLEGI PALE SHALA LEKLCPTLP+GA+VV+N SG GDKDV T + Y
Sbjct: 419 FKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKY 472
>TAIR|locus:2160190 [details] [associations]
symbol:TSB1 "tryptophan synthase beta-subunit 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004834 "tryptophan synthase activity"
evidence=IEA;IMP;IDA] [GO:0006568 "tryptophan metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;ISS;IDA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0000162 "tryptophan biosynthetic process" evidence=TAS]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=TAS]
[GO:0006979 "response to oxidative stress" evidence=IEP]
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0006979
SUPFAM:SSF53686 GO:GO:0009651 GO:GO:0009684 EMBL:AB005232
eggNOG:COG0133 HOGENOM:HOG000161710 KO:K01696 ProtClustDB:PLN02618
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 EMBL:M23872
EMBL:AF367264 EMBL:AY133620 EMBL:AY087382 IPI:IPI00548576
PIR:A33929 RefSeq:NP_200292.1 UniGene:At.23506
ProteinModelPortal:P14671 SMR:P14671 IntAct:P14671 STRING:P14671
PaxDb:P14671 PRIDE:P14671 EnsemblPlants:AT5G54810.1 GeneID:835571
KEGG:ath:AT5G54810 TAIR:At5g54810 InParanoid:P14671 OMA:QIIVICL
PhylomeDB:P14671 BioCyc:MetaCyc:AT5G54810-MONOMER
Genevestigator:P14671 GermOnline:AT5G54810 Uniprot:P14671
Length = 470
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 187/294 (63%), Positives = 236/294 (80%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKR+G+K I+A TGAGQHGV ++MG DME+Q+ V M+LLGA+
Sbjct: 174 LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAE 233
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V+ V K+A+SEAIR+WV N+E ++Y+ G+V GPHP P+MVR+F ++IGKETRKQ
Sbjct: 234 VRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 293
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
A+EKWGGKPDVL+ACVG GSNA+GLFHEF+ND +VR+IGVEAAGFGLDSGKHAATL KG+
Sbjct: 294 ALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGD 353
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VGV HGAMSYLLQD++GQI+ HS+ GL+YPGVGPE SF +D GRAE+Y+ TD+EA++A
Sbjct: 354 VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEA 413
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 291
++R+ RLEGI PALE SHALA+LEKLCPTL +G +VV+N SG GDKDV TV Y
Sbjct: 414 FKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKY 467
>TIGR_CMR|DET_1487 [details] [associations]
symbol:DET_1487 "tryptophan synthase, beta subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0133 HOGENOM:HOG000161710
KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
OMA:REDLCHT ProtClustDB:PRK04346 RefSeq:YP_182187.1
ProteinModelPortal:Q3Z6G2 SMR:Q3Z6G2 STRING:Q3Z6G2 GeneID:3229283
KEGG:det:DET1487 PATRIC:21609996
BioCyc:DETH243164:GJNF-1488-MONOMER Uniprot:Q3Z6G2
Length = 399
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 150/291 (51%), Positives = 211/291 (72%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A MG+K ++A TGAGQHGV V+MG D+++Q+ V MKL+G +
Sbjct: 101 LLALHMGKKRVIAETGAGQHGVATAAVCAMLGLECIVYMGEDDIKRQALNVFRMKLMGTE 160
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V++V K+A +EA+R+WV N E +YY+ G+VVGP P P MVR+FQ++IG+ET+ Q
Sbjct: 161 VRSVSSGSRTLKDAINEAMRDWVSNPETTYYIIGSVVGPRPYPAMVRDFQAVIGQETKAQ 220
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
++ + GG PD ++ACVG GSNA+G+F++FI D+ VRLIGVEAAG G+ +GKH+ATL+ G+
Sbjct: 221 SLRQLGGLPDCIVACVGGGSNAMGIFYDFIPDQSVRLIGVEAAGSGISTGKHSATLSAGK 280
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VG+ HGAMSYLLQDE GQ++ THS+ GL+YPGVGPE S+L+D R E+ + TD+EA+
Sbjct: 281 VGILHGAMSYLLQDEHGQVIETHSISAGLDYPGVGPEHSYLKDNKRVEYVSVTDEEALNG 340
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ LC LEGI PALE+SHA+A K+ +P +V+N SG GDKD+D V
Sbjct: 341 FKLLCSLEGIMPALESSHAIAHALKIAVGMPKNKNIVINLSGRGDKDMDIV 391
>TIGR_CMR|CHY_1582 [details] [associations]
symbol:CHY_1582 "tryptophan synthase, beta subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004834 "tryptophan synthase activity" evidence=ISS]
HAMAP:MF_00133 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR023026 PIRSF:PIRSF001413 PROSITE:PS00168
UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0133
HOGENOM:HOG000161710 KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 OMA:REDLCHT ProtClustDB:PRK04346
RefSeq:YP_360411.1 ProteinModelPortal:Q3ABS3 SMR:Q3ABS3
STRING:Q3ABS3 GeneID:3727943 KEGG:chy:CHY_1582 PATRIC:21276289
BioCyc:CHYD246194:GJCN-1581-MONOMER Uniprot:Q3ABS3
Length = 402
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 150/291 (51%), Positives = 210/291 (72%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A+RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LLGAQ
Sbjct: 103 LLARRMGKKKVVAETGAGQHGVATATAAAKFGLECTIFMGAEDVRRQELNVYRMRLLGAQ 162
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V++V K+A +EAIR WV ++ +YY+ G+V GPHP P +VR+FQ +IG+ET+ Q
Sbjct: 163 VESVTSGSRTLKDAMNEAIRYWVTHVRDTYYVLGSVGGPHPYPTIVRDFQKVIGEETKAQ 222
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+ + G PD+++ACVG GSNA+G+F+ F+ +EDVRL+GVEAAG GL+SG+HAATL++G+
Sbjct: 223 ILAQEGRLPDLIVACVGGGSNAIGMFYPFL-EEDVRLVGVEAAGLGLESGRHAATLSRGK 281
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VGV HGA SY+LQD+ GQI+ HS+ GL+YPGVGPE ++L+D GR E+ TD+EA++A
Sbjct: 282 VGVLHGAKSYVLQDDRGQIVEAHSISAGLDYPGVGPEHAYLKDIGRVEYTAVTDEEALEA 341
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ L + EGI PALE++HA+A +L L + VV+N SG GDKDV TV
Sbjct: 342 FKLLAKTEGILPALESAHAVAKGVELARELESEKIVVINLSGRGDKDVYTV 392
>TIGR_CMR|BA_1253 [details] [associations]
symbol:BA_1253 "tryptophan synthase, beta subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0133
HOGENOM:HOG000161710 KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 RefSeq:NP_843725.1 RefSeq:YP_017868.1
RefSeq:YP_027432.1 ProteinModelPortal:Q81TL8 SMR:Q81TL8
IntAct:Q81TL8 DNASU:1086833 EnsemblBacteria:EBBACT00000009150
EnsemblBacteria:EBBACT00000015486 EnsemblBacteria:EBBACT00000022597
GeneID:1086833 GeneID:2819609 GeneID:2851906 KEGG:ban:BA_1253
KEGG:bar:GBAA_1253 KEGG:bat:BAS1161 OMA:REDLCHT
ProtClustDB:PRK04346 BioCyc:BANT260799:GJAJ-1236-MONOMER
BioCyc:BANT261594:GJ7F-1290-MONOMER Uniprot:Q81TL8
Length = 397
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 147/294 (50%), Positives = 205/294 (69%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LLGA+
Sbjct: 100 LLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELLGAK 159
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V++V G K+A +EA+R WV ++ ++Y+ G+V+GPHP P +VR+FQS+IG ET+KQ
Sbjct: 160 VESVAAGSGTLKDAVNEALRYWVSHVHDTHYIMGSVLGPHPFPQIVRDFQSVIGNETKKQ 219
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
G P+ ++AC+G GSNA+G+F+ F++DE+V L GVEAAG G+ + KHAATL KG
Sbjct: 220 YEALEGKLPEAVVACIGGGSNAMGMFYPFVHDEEVALYGVEAAGKGVHTEKHAATLTKGS 279
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VGV HG+M YLLQ+EEGQI HS+ GL+YPGVGPE S L+D GR +++ TD EA++A
Sbjct: 280 VGVLHGSMMYLLQNEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGRVSYHSITDDEALEA 339
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 291
+Q L + EGI PALE+SHA+A+ KL P + +V+ SG GDKDV+++ Y
Sbjct: 340 FQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRY 393
>UNIPROTKB|P66984 [details] [associations]
symbol:trpB "Tryptophan synthase beta chain" species:1773
"Mycobacterium tuberculosis" [GO:0000162 "tryptophan biosynthetic
process" evidence=IDA] [GO:0004834 "tryptophan synthase activity"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 GO:GO:0040007 SUPFAM:SSF53686
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842577 eggNOG:COG0133 HOGENOM:HOG000161710 KO:K01696
OMA:WVANVDS GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
ProtClustDB:PRK04346 PIR:B70557 RefSeq:NP_216128.1
RefSeq:NP_336102.1 RefSeq:YP_006515001.1 PDB:2O2E PDB:2O2J
PDBsum:2O2E PDBsum:2O2J ProteinModelPortal:P66984 SMR:P66984
EnsemblBacteria:EBMYCT00000000275 EnsemblBacteria:EBMYCT00000071294
GeneID:13316390 GeneID:885297 GeneID:924262 KEGG:mtc:MT1647
KEGG:mtu:Rv1612 KEGG:mtv:RVBD_1612 PATRIC:18125384
TubercuList:Rv1612 EvolutionaryTrace:P66984 Uniprot:P66984
Length = 422
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 145/294 (49%), Positives = 198/294 (67%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A+RMG+ ++A TGAGQHGV ++MG D +Q+ V M+LLGA+
Sbjct: 122 LLARRMGKTRVIAETGAGQHGVATATACALLGLDCVIYMGGIDTARQALNVARMRLLGAE 181
Query: 61 VKAVD-GC--FKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V AV G K+A +EA R+WV N + +YY GT GPHP P MVR+FQ IIG E R Q
Sbjct: 182 VVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQ 241
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+ G PD ++ACVG GSNA+G+FH F++D VRL+G EAAG G+++G+HAAT G
Sbjct: 242 IQGQAGRLPDAVVACVGGGSNAIGIFHAFLDDPGVRLVGFEAAGDGVETGRHAATFTAGS 301
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G +HG+ SYLLQDE+GQ + +HS+ GL+YPGVGPE ++L++ GR ++ TD EA+ A
Sbjct: 302 PGAFHGSFSYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDA 361
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 291
+ LCR+EGI PA+E++HA+A KL L GA +VVN SG GDKDV+T +
Sbjct: 362 FGLLCRMEGIIPAIESAHAVAGALKLGVELGRGAVIVVNLSGRGDKDVETAAKW 415
>TIGR_CMR|CJE_0397 [details] [associations]
symbol:CJE_0397 "tryptophan synthase, beta subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0133 HOGENOM:HOG000161710
KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
OMA:REDLCHT ProtClustDB:PRK04346 RefSeq:YP_178416.1
ProteinModelPortal:Q5HWB9 SMR:Q5HWB9 STRING:Q5HWB9 GeneID:3231159
KEGG:cjr:CJE0397 PATRIC:20042496 BioCyc:CJEJ195099:GJC0-402-MONOMER
Uniprot:Q5HWB9
Length = 392
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 142/295 (48%), Positives = 206/295 (69%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AK+MG+K I+A TGAGQHG+ ++MG D+++Q+ V M+LLGA+
Sbjct: 93 LLAKKMGKKKIIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAK 152
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
+ AV KEA++ AI+ WVG+++ +Y+ G+ VGP+P P MV FQSIIGKE + Q
Sbjct: 153 IHAVQSGLKTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQ 212
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
++K K D ++A VG GSNA G+F++FI DE+V+LIG+EA G G+D+ HAATL KG+
Sbjct: 213 -LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGK 271
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G+ HG + +LQD+ G IL HSV GL+YPG+GP +FL ++ RA+++ +D+E +QA
Sbjct: 272 TGIIHGMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQA 331
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNYR 292
+ LC+ EGI A+E+SHALAFLEKLCPTL + +VVN SG GDKD+ + +Y+
Sbjct: 332 LKLLCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYK 386
>CGD|CAL0004378 [details] [associations]
symbol:TRP5 species:5476 "Candida albicans" [GO:0016020
"membrane" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004834 "tryptophan
synthase activity" evidence=IEA] [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA] HAMAP:MF_00131 HAMAP:MF_00133
InterPro:IPR002028 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168
InterPro:IPR001926 CGD:CAL0004378 Pfam:PF00291 SUPFAM:SSF53686
GO:GO:0016020 Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 EMBL:AACQ01000283
RefSeq:XP_710312.1 ProteinModelPortal:Q59KP3 SMR:Q59KP3
STRING:Q59KP3 GeneID:3648087 KEGG:cal:CaO19.4718 Uniprot:Q59KP3
Length = 702
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 144/292 (49%), Positives = 200/292 (68%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
+IAKR+G+K I+A TGAGQHGV VFMG D +Q+ V MK+LGA
Sbjct: 387 LIAKRLGKKKIIAETGAGQHGVATATACAKFGLECTVFMGAEDTRRQALNVFRMKILGAN 446
Query: 61 VKAV-DGC--FKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V +G ++A+SEA R WV NLE ++Y+ G+ +GPHP P +VR FQS+IG+ET++Q
Sbjct: 447 VVPVKNGTQTLRDATSEAFRFWVSNLETTHYVVGSAIGPHPYPTLVRTFQSVIGQETKEQ 506
Query: 118 AMEKWGGK-PDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKG 176
GK P+ ++ACVG GSN+ G+F F ND++V+L+GVEA G GLD+ +H+ATL G
Sbjct: 507 FKALNNGKLPNAVVACVGGGSNSTGMFSPFENDKEVKLLGVEAGGDGLDTERHSATLTAG 566
Query: 177 EVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQ 236
GV+HG +Y+LQD +GQ+ THSV GL+YPGVGPE+++ + GRAEF ATD +A++
Sbjct: 567 IPGVFHGVKTYVLQDNDGQVHDTHSVSAGLDYPGVGPELAYWKSIGRAEFVAATDAQALE 626
Query: 237 AYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ L +LEGI PALE+SHA+ +L T+ +V+N SG GDKDV +V
Sbjct: 627 GFRLLSQLEGIIPALESSHAIYGAVELAKTMSKDQHIVINVSGRGDKDVQSV 678
>UNIPROTKB|Q59KP3 [details] [associations]
symbol:TRP5 "Likely tryptophan synthetase alpha chain"
species:237561 "Candida albicans SC5314" [GO:0016020 "membrane"
evidence=IDA] HAMAP:MF_00131 HAMAP:MF_00133 InterPro:IPR002028
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 InterPro:IPR023026
Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168 InterPro:IPR001926
CGD:CAL0004378 Pfam:PF00291 SUPFAM:SSF53686 GO:GO:0016020
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 EMBL:AACQ01000283
RefSeq:XP_710312.1 ProteinModelPortal:Q59KP3 SMR:Q59KP3
STRING:Q59KP3 GeneID:3648087 KEGG:cal:CaO19.4718 Uniprot:Q59KP3
Length = 702
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 144/292 (49%), Positives = 200/292 (68%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
+IAKR+G+K I+A TGAGQHGV VFMG D +Q+ V MK+LGA
Sbjct: 387 LIAKRLGKKKIIAETGAGQHGVATATACAKFGLECTVFMGAEDTRRQALNVFRMKILGAN 446
Query: 61 VKAV-DGC--FKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V +G ++A+SEA R WV NLE ++Y+ G+ +GPHP P +VR FQS+IG+ET++Q
Sbjct: 447 VVPVKNGTQTLRDATSEAFRFWVSNLETTHYVVGSAIGPHPYPTLVRTFQSVIGQETKEQ 506
Query: 118 AMEKWGGK-PDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKG 176
GK P+ ++ACVG GSN+ G+F F ND++V+L+GVEA G GLD+ +H+ATL G
Sbjct: 507 FKALNNGKLPNAVVACVGGGSNSTGMFSPFENDKEVKLLGVEAGGDGLDTERHSATLTAG 566
Query: 177 EVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQ 236
GV+HG +Y+LQD +GQ+ THSV GL+YPGVGPE+++ + GRAEF ATD +A++
Sbjct: 567 IPGVFHGVKTYVLQDNDGQVHDTHSVSAGLDYPGVGPELAYWKSIGRAEFVAATDAQALE 626
Query: 237 AYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ L +LEGI PALE+SHA+ +L T+ +V+N SG GDKDV +V
Sbjct: 627 GFRLLSQLEGIIPALESSHAIYGAVELAKTMSKDQHIVINVSGRGDKDVQSV 678
>TIGR_CMR|SPO_0808 [details] [associations]
symbol:SPO_0808 "tryptophan synthase, beta subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISS] [GO:0004834 "tryptophan
synthase activity" evidence=ISS] HAMAP:MF_00133 InterPro:IPR006653
InterPro:IPR006654 InterPro:IPR023026 PIRSF:PIRSF001413
PROSITE:PS00168 UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291
SUPFAM:SSF53686 EMBL:CP000031 GenomeReviews:CP000031_GR
eggNOG:COG0133 HOGENOM:HOG000161710 KO:K01696 GO:GO:0004834
PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 OMA:REDLCHT
ProtClustDB:PRK04346 RefSeq:YP_166061.1 HSSP:P0A2K1
ProteinModelPortal:Q5LV94 SMR:Q5LV94 GeneID:3193893
KEGG:sil:SPO0808 PATRIC:23374893 Uniprot:Q5LV94
Length = 416
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 141/295 (47%), Positives = 198/295 (67%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A+RMG+ I+A TGAGQHGV V+MG D+ +Q+ V M+LLGA+
Sbjct: 107 ILARRMGKTRIIAETGAGQHGVATATVCAKFGLKCVVYMGAHDVRRQAPNVFRMRLLGAE 166
Query: 61 VKAVD---GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V G K+A ++A+R+WV N+ ++Y GTV GPHP P MVR+FQSIIGKE ++Q
Sbjct: 167 VIPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQSIIGKEAKEQ 226
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSG-KHAATLAKG 176
M+ G PD ++A +G GSNA+GLF+ F++D V +IGVEA G G++ +H A+L G
Sbjct: 227 MMKAEGRLPDTIIAAIGGGSNAMGLFYPFLDDTSVNIIGVEAGGKGVNEKMEHCASLTGG 286
Query: 177 EVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQ 236
GV HG +YLLQD++GQIL +S+ GL+YPG+GPE S+L + GRA++ + TD EA++
Sbjct: 287 RPGVLHGNRTYLLQDDDGQILEGYSISAGLDYPGIGPEHSWLHEVGRAKYVSITDMEALE 346
Query: 237 AYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVNY 291
A++ C EGI PALE SHALA + KL P LP +++N G GDKD+ TV +
Sbjct: 347 AFKLCCATEGIIPALEPSHALAHVMKLAPELPKDHIIIMNMCGRGDKDIFTVAKF 401
>SGD|S000002994 [details] [associations]
symbol:TRP5 "Tryptophan synthase" species:4932 "Saccharomyces
cerevisiae" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008652 "cellular
amino acid biosynthetic process" evidence=IEA] [GO:0009073
"aromatic amino acid family biosynthetic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0006568 "tryptophan
metabolic process" evidence=IEA] [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004834 "tryptophan synthase activity"
evidence=IEA;ISO;IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR002028 InterPro:IPR006653 InterPro:IPR006654
InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR018204
InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168
UniPathway:UPA00035 InterPro:IPR001926 SGD:S000002994 Pfam:PF00291
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF53686 EMBL:BK006941
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 OMA:DSFIYVV
OrthoDB:EOG4M3DHV EMBL:V01342 EMBL:V01343 EMBL:Z72548 PIR:A01154
RefSeq:NP_011489.1 ProteinModelPortal:P00931 SMR:P00931
DIP:DIP-1398N IntAct:P00931 MINT:MINT-405390 STRING:P00931
PaxDb:P00931 PeptideAtlas:P00931 PRIDE:P00931 EnsemblFungi:YGL026C
GeneID:852858 KEGG:sce:YGL026C CYGD:YGL026c NextBio:972463
Genevestigator:P00931 GermOnline:YGL026C Uniprot:P00931
Length = 707
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 142/292 (48%), Positives = 201/292 (68%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKR+G+K+++A TGAGQHGV VFMG D+ +Q+ V M++LGA+
Sbjct: 393 LLAKRLGKKNVIAETGAGQHGVATATACAKFGLTCTVFMGAEDVRRQALNVFRMRILGAK 452
Query: 61 VKAV-DGC--FKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V AV +G ++A+SEA R WV NL+ +YY+ G+ +GPHP P +VR FQS+IGKET++Q
Sbjct: 453 VIAVTNGTKTLRDATSEAFRFWVTNLKTTYYVVGSAIGPHPYPTLVRTFQSVIGKETKEQ 512
Query: 118 AMEKWGGK-PDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKG 176
GK PD ++ACVG GSN+ G+F F +D V+L+GVEA G G+D+ H+ATL G
Sbjct: 513 FAAMNNGKLPDAVVACVGGGSNSTGMFSPFEHDTSVKLLGVEAGGDGVDTKFHSATLTAG 572
Query: 177 EVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQ 236
GV+HG +Y+LQD +GQ+ THSV GL+YPGVGPE+++ + TGRA+F ATD +A+
Sbjct: 573 RPGVFHGVKTYVLQDSDGQVHDTHSVSAGLDYPGVGPELAYWKSTGRAQFIAATDAQALL 632
Query: 237 AYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ L +LEGI PALE+SHA+ +L T+ +V+N SG GDKDV +V
Sbjct: 633 GFKLLSQLEGIIPALESSHAVYGACELAKTMKPDQHLVINISGRGDKDVQSV 684
>ASPGD|ASPL0000007723 [details] [associations]
symbol:trpB species:162425 "Emericella nidulans"
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0070791 "cleistothecium development"
evidence=IMP] [GO:0000162 "tryptophan biosynthetic process"
evidence=IGI;IMP] [GO:0004834 "tryptophan synthase activity"
evidence=IGI;RCA;IMP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] HAMAP:MF_00131 HAMAP:MF_00133 InterPro:IPR002028
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR011060
InterPro:IPR013785 InterPro:IPR018204 InterPro:IPR023026
Pfam:PF00290 PROSITE:PS00167 PROSITE:PS00168 InterPro:IPR001926
Pfam:PF00291 SUPFAM:SSF53686 Gene3D:3.20.20.70 EMBL:BN001301
SUPFAM:SSF51366 EMBL:AACD01000106 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 KO:K01694 OMA:DSFIYVV
OrthoDB:EOG4M3DHV RefSeq:XP_663835.1 ProteinModelPortal:Q5AZP9
SMR:Q5AZP9 STRING:Q5AZP9 EnsemblFungi:CADANIAT00006763
GeneID:2870792 KEGG:ani:AN6231.2 Uniprot:Q5AZP9
Length = 723
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 137/291 (47%), Positives = 197/291 (67%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++A+R+G+ I+A TGAGQHGV V+MG D+ +Q+ V MKLLGA
Sbjct: 416 LLARRLGKTRIIAETGAGQHGVATATVCAKFGMKCVVYMGAEDVRRQALNVFRMKLLGAS 475
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V AVD ++A +EA+R WV +L+ ++Y+ G+ +GPHP P +VR FQS+IG+ET++Q
Sbjct: 476 VVAVDAGSRTLRDAVNEALRAWVVDLDTTHYIIGSAIGPHPFPTIVRTFQSVIGEETKQQ 535
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
E+ G PD ++ACVG GSNA+G F+ F D V+L+GVEA G G+D+ +H+ATL+ G
Sbjct: 536 LQEQIGKLPDAVVACVGGGSNAVGSFYPFSKDTSVKLLGVEAGGDGIDTNRHSATLSGGS 595
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
GV HG +Y+LQDE GQ+ THS+ GL+YPGVGPE+S +D+ RA F ATD +A+
Sbjct: 596 KGVLHGVRTYILQDEHGQVSETHSISAGLDYPGVGPELSNWKDSDRAHFIAATDAQALSG 655
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ + + EGI PALE+SHA+ +L T+ G +V+ SG GDKDV++V
Sbjct: 656 FRTMAQTEGIIPALESSHAIWGAIELAKTMGKGKDIVLTVSGRGDKDVESV 706
>TIGR_CMR|SO_3023 [details] [associations]
symbol:SO_3023 "tryptophan synthase, beta subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISS] [GO:0004834 "tryptophan
synthase activity" evidence=ISS] HAMAP:MF_00133 InterPro:IPR006653
InterPro:IPR006654 InterPro:IPR023026 PIRSF:PIRSF001413
PROSITE:PS00168 UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291
SUPFAM:SSF53686 EMBL:AE014299 GenomeReviews:AE014299_GR
eggNOG:COG0133 HOGENOM:HOG000161710 KO:K01696 GO:GO:0004834
PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 OMA:QIIVICL
ProtClustDB:PRK04346 RefSeq:NP_718591.1 ProteinModelPortal:Q8ECV0
SMR:Q8ECV0 GeneID:1170710 KEGG:son:SO_3023 PATRIC:23525682
Uniprot:Q8ECV0
Length = 396
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 141/291 (48%), Positives = 196/291 (67%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+K I+A TGAGQHGV V+MG D+ +QS V M+L+GA+
Sbjct: 97 LLAKRMGKKEIIAETGAGQHGVATALACALLGLKCKVYMGAKDVARQSPNVFRMRLMGAE 156
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W G+ EK++YL GT GPHP P +VREFQ IIG+ET+KQ
Sbjct: 157 VIPVTSGSATLKDACNEAMRDWSGSYEKAHYLLGTAAGPHPFPTIVREFQRIIGEETKKQ 216
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+E+ G PD ++ACVG GSNA+G+F +FI++ +V LIGVE AG G+D+ H A L G+
Sbjct: 217 ILEREGRLPDAVIACVGGGSNAIGMFADFIDETNVELIGVEPAGKGIDTHMHGAPLKHGK 276
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G++ G + L+QD EGQI ++S+ GL++P VGP+ + L GRA + +ATD EA++A
Sbjct: 277 TGIFFGMKAPLMQDSEGQIEESYSISAGLDFPSVGPQHAHLNAIGRARYESATDDEALEA 336
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
+Q L R EGI PALE++HALA+ +L +VVN SG GDKD+ TV
Sbjct: 337 FQLLARCEGIIPALESAHALAYALRLAKECTKETILVVNLSGRGDKDIFTV 387
>UNIPROTKB|P0A879 [details] [associations]
symbol:trpB species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0004834 "tryptophan synthase
activity" evidence=IEA;IDA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=IMP] [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA;IMP] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 GO:GO:0005737 GO:GO:0030170
SUPFAM:SSF53686 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:J01714 eggNOG:COG0133
HOGENOM:HOG000161710 KO:K01696 OMA:WVANVDS GO:GO:0004834
PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 EMBL:V00372 EMBL:U23489
EMBL:U23490 EMBL:U23492 EMBL:U25417 EMBL:U25418 EMBL:U25419
EMBL:U25422 ProtClustDB:PRK04346 EMBL:V00365 EMBL:U23493
EMBL:U23500 EMBL:U25423 EMBL:U25426 EMBL:U25427 EMBL:U25428
EMBL:U25429 PIR:H64873 RefSeq:NP_415777.1 RefSeq:YP_489529.1
PDB:2DH5 PDB:2DH6 PDBsum:2DH5 PDBsum:2DH6 ProteinModelPortal:P0A879
SMR:P0A879 IntAct:P0A879 SWISS-2DPAGE:P0A879 PaxDb:P0A879
PRIDE:P0A879 EnsemblBacteria:EBESCT00000004137
EnsemblBacteria:EBESCT00000004138 EnsemblBacteria:EBESCT00000015265
GeneID:12930549 GeneID:945768 KEGG:ecj:Y75_p1235 KEGG:eco:b1261
PATRIC:32117782 EchoBASE:EB1018 EcoGene:EG11025
BioCyc:EcoCyc:TRYPSYN-BPROTEIN BioCyc:ECOL316407:JW1253-MONOMER
BioCyc:MetaCyc:TRYPSYN-BPROTEIN SABIO-RK:P0A879
EvolutionaryTrace:P0A879 Genevestigator:P0A879 Uniprot:P0A879
Length = 397
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 137/292 (46%), Positives = 199/292 (68%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+GA+
Sbjct: 96 LLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAE 155
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W G+ E ++Y+ GT GPHP P +VREFQ +IG+ET+ Q
Sbjct: 156 VIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQ 215
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+E+ G PD ++ACVG GSNA+G+F +FIN+ +V LIGVE G G+++G+H A L G
Sbjct: 216 ILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGR 275
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VG+Y G + ++Q E+GQI ++S+ GL++P VGP+ ++L TGRA++ + TD EA++A
Sbjct: 276 VGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEA 335
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTV 288
++ LC EGI PALE+SHALA K+ P+ ++ VVN SG GDKD+ TV
Sbjct: 336 FKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTV 387
>UNIPROTKB|P0A2K1 [details] [associations]
symbol:trpB "Tryptophan synthase beta chain" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0005515 "protein binding" evidence=IPI] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:AE006468
GenomeReviews:AE006468_GR HOGENOM:HOG000161710 KO:K01696
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 EMBL:V00364
EMBL:V01376 EMBL:J01810 PDB:1A50 PDB:1A5A PDB:1A5B PDB:1A5S
PDB:1BEU PDB:1BKS PDB:1C29 PDB:1C8V PDB:1C9D PDB:1CW2 PDB:1CX9
PDB:1FUY PDB:1K3U PDB:1K7E PDB:1K7F PDB:1K7X PDB:1K8X PDB:1K8Y
PDB:1K8Z PDB:1KFB PDB:1KFC PDB:1KFE PDB:1KFJ PDB:1KFK PDB:1QOP
PDB:1QOQ PDB:1TJP PDB:1TTP PDB:1TTQ PDB:1UBS PDB:1WBJ PDB:2CLE
PDB:2CLF PDB:2CLH PDB:2CLI PDB:2CLK PDB:2CLL PDB:2CLM PDB:2CLO
PDB:2J9X PDB:2J9Y PDB:2J9Z PDB:2RH9 PDB:2RHG PDB:2TRS PDB:2TSY
PDB:2TYS PDB:2WSY PDB:3CEP PDB:3PR2 PDBsum:1A50 PDBsum:1A5A
PDBsum:1A5B PDBsum:1A5S PDBsum:1BEU PDBsum:1BKS PDBsum:1C29
PDBsum:1C8V PDBsum:1C9D PDBsum:1CW2 PDBsum:1CX9 PDBsum:1FUY
PDBsum:1K3U PDBsum:1K7E PDBsum:1K7F PDBsum:1K7X PDBsum:1K8X
PDBsum:1K8Y PDBsum:1K8Z PDBsum:1KFB PDBsum:1KFC PDBsum:1KFE
PDBsum:1KFJ PDBsum:1KFK PDBsum:1QOP PDBsum:1QOQ PDBsum:1TJP
PDBsum:1TTP PDBsum:1TTQ PDBsum:1UBS PDBsum:1WBJ PDBsum:2CLE
PDBsum:2CLF PDBsum:2CLH PDBsum:2CLI PDBsum:2CLK PDBsum:2CLL
PDBsum:2CLM PDBsum:2CLO PDBsum:2J9X PDBsum:2J9Y PDBsum:2J9Z
PDBsum:2RH9 PDBsum:2RHG PDBsum:2TRS PDBsum:2TSY PDBsum:2TYS
PDBsum:2WSY PDBsum:3CEP PDBsum:3PR2 OMA:REDLCHT
ProtClustDB:PRK04346 EMBL:V01377 EMBL:M24299 PIR:A01156
RefSeq:NP_460685.1 ProteinModelPortal:P0A2K1 SMR:P0A2K1
DIP:DIP-35707N IntAct:P0A2K1 MINT:MINT-112874 PRIDE:P0A2K1
GeneID:1253245 KEGG:stm:STM1726 PATRIC:32381965
EvolutionaryTrace:P0A2K1 Uniprot:P0A2K1
Length = 397
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 137/292 (46%), Positives = 196/292 (67%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+ I+A TGAGQHGV ++MG D+E+QS V M+L+GA+
Sbjct: 96 LLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAE 155
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W G+ E ++Y+ GT GPHP P +VREFQ +IG+ET+ Q
Sbjct: 156 VIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQ 215
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
++K G PD ++ACVG GSNA+G+F +FIND V LIGVE G G+++G+H A L G
Sbjct: 216 ILDKEGRLPDAVIACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGR 275
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VG+Y G + ++Q +GQI ++S+ GL++P VGP+ ++L GRA++ + TD EA++A
Sbjct: 276 VGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEA 335
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTV 288
++ LCR EGI PALE+SHALA K+ P ++ VVN SG GDKD+ TV
Sbjct: 336 FKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTV 387
>TIGR_CMR|CPS_3526 [details] [associations]
symbol:CPS_3526 "tryptophan synthase, beta subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0133 HOGENOM:HOG000161710
KO:K01696 GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
ProtClustDB:PRK04346 RefSeq:YP_270200.1 ProteinModelPortal:Q47YC0
SMR:Q47YC0 STRING:Q47YC0 GeneID:3519591 KEGG:cps:CPS_3526
PATRIC:21469989 OMA:ATVFMTR BioCyc:CPSY167879:GI48-3554-MONOMER
Uniprot:Q47YC0
Length = 420
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 138/288 (47%), Positives = 190/288 (65%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+ I+A TGAGQHGV V+MG D ++Q V M+L+GA+
Sbjct: 109 LLAKRMGKTEIIAETGAGQHGVATAIACSLLGLKCKVYMGAVDCQRQQPNVFRMELMGAE 168
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V G K+A +EA+R+W N E ++YL GT GPHP P +VREFQ +IG+E + Q
Sbjct: 169 VIPVTAGSGTLKDAVNEALRDWSANYENAHYLLGTAAGPHPFPTIVREFQKMIGEEAKAQ 228
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
++ G PD ++ACVG GSNA+G+FH+FI +E V+LIGVEA G G+D+ +H ATL G
Sbjct: 229 FYDEEGRLPDYVIACVGGGSNAIGMFHDFIKEEGVKLIGVEAGGKGIDTNEHGATLVAGT 288
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G+ HG +Y++QD+ GQI ++SV GL+YP VGP+ +FL+DTGRA++ D EA+ A
Sbjct: 289 KGMLHGNYTYIMQDDFGQIQESYSVSAGLDYPAVGPQHAFLKDTGRAQYVPINDDEALAA 348
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDV 285
+Q L EGI PALE+SHALA K+ + +VN SG GDKD+
Sbjct: 349 FQALAMNEGIIPALESSHALAQALKMAESATEETIYLVNLSGRGDKDL 396
>POMBASE|SPAC19A8.15 [details] [associations]
symbol:trp2 "tryptophan synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000162 "tryptophan
biosynthetic process" evidence=ISO] [GO:0004834 "tryptophan
synthase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002028 InterPro:IPR006653
InterPro:IPR006654 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR018204 InterPro:IPR023026 Pfam:PF00290 PROSITE:PS00167
PROSITE:PS00168 UniPathway:UPA00035 InterPro:IPR001926
PomBase:SPAC19A8.15 Pfam:PF00291 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 SUPFAM:SSF53686 GenomeReviews:CU329670_GR
Gene3D:3.20.20.70 SUPFAM:SSF51366 eggNOG:COG0133
HOGENOM:HOG000161710 GO:GO:0004834 PANTHER:PTHR10314:SF3
TIGRFAMs:TIGR00263 TIGRFAMs:TIGR00262 EMBL:D89113 PIR:T37946
PIR:T42090 RefSeq:NP_593777.1 ProteinModelPortal:O13831 SMR:O13831
STRING:O13831 EnsemblFungi:SPAC19A8.15.1 GeneID:2542240
KEGG:spo:SPAC19A8.15 KO:K01694 OMA:DSFIYVV OrthoDB:EOG4M3DHV
NextBio:20803307 Uniprot:O13831
Length = 697
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 133/291 (45%), Positives = 192/291 (65%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKR+G+ I+A TGAGQHGV ++MG D +Q+ V ++LLGA+
Sbjct: 390 LLAKRLGKNRIIAETGAGQHGVATAICAAKFGMKCTIYMGAEDCRRQALNVFRIRLLGAE 449
Query: 61 VKAVDG---CFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V ++A +EA++ WV ++ ++YL G+ +GPHP P +V+ FQS+IG+ET+ Q
Sbjct: 450 VVPVTSGTQTLRDAVNEALKAWVEQIDTTHYLIGSAIGPHPFPTIVKTFQSVIGEETKAQ 509
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
EK PD ++ACVG GSN++G+F F D+ V ++G EA G G+D+ KH+ATL G+
Sbjct: 510 MQEKRKKLPDAVVACVGGGSNSIGMFSPFKADKSVMMLGCEAGGDGVDTPKHSATLTMGK 569
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
VGV+HG +Y+LQ E+GQI THS+ GL+YPGVGPE+S L+ T RAEF TD + ++
Sbjct: 570 VGVFHGVRTYVLQREDGQIQDTHSISAGLDYPGVGPELSELKYTNRAEFIAVTDAQCLEG 629
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTV 288
++ LC LEGI PALE+SHA+ +L LP +V+ SG GDKDV +V
Sbjct: 630 FRALCHLEGIIPALESSHAVYGGMELAKKLPKDKDIVITISGRGDKDVQSV 680
>UNIPROTKB|Q9KST6 [details] [associations]
symbol:trpB "Tryptophan synthase beta chain" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:AE003852
GenomeReviews:AE003852_GR eggNOG:COG0133 KO:K01696 OMA:WVANVDS
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
ProtClustDB:PRK04346 PIR:E82232 RefSeq:NP_230815.1
ProteinModelPortal:Q9KST6 SMR:Q9KST6 PRIDE:Q9KST6 DNASU:2614603
GeneID:2614603 KEGG:vch:VC1170 PATRIC:20081432 Uniprot:Q9KST6
Length = 396
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 139/292 (47%), Positives = 193/292 (66%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+ I+A TGAGQHGV V+MG D+E+QS V M+L+GA
Sbjct: 95 LLAKRMGKHEIIAETGAGQHGVATALACALLGLKCRVYMGAKDVERQSPNVFRMRLMGAT 154
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W + E ++YL GT GPHP P +VREFQ IIG+ET+ Q
Sbjct: 155 VIPVHSGSATLKDACNEALRDWSASYETAHYLLGTAAGPHPFPTIVREFQRIIGEETKNQ 214
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+ + G PD ++ACVG GSNA+G+F +FI +E VRLIG+E AG G+ + +H A L G+
Sbjct: 215 ILAREGRLPDAVIACVGGGSNAIGMFADFIEEESVRLIGIEPAGKGIHTHQHGAPLKHGK 274
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G++ G + L+QDE GQ+ ++SV GL++P VGP+ ++L GRAE+ + TD EA+ A
Sbjct: 275 TGIFFGMKAPLMQDEHGQVEESYSVSAGLDFPSVGPQHAYLNAIGRAEYESITDDEALDA 334
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTV 288
+Q L R EGI PALE+SHALA K+ P+ ++ VVN SG GDKD+ TV
Sbjct: 335 FQALARNEGIIPALESSHALAHAIKMAYAEPDKEQLLVVNLSGRGDKDIFTV 386
>TIGR_CMR|VC_1170 [details] [associations]
symbol:VC_1170 "tryptophan synthase, beta subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:AE003852
GenomeReviews:AE003852_GR eggNOG:COG0133 KO:K01696 OMA:WVANVDS
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263
ProtClustDB:PRK04346 PIR:E82232 RefSeq:NP_230815.1
ProteinModelPortal:Q9KST6 SMR:Q9KST6 PRIDE:Q9KST6 DNASU:2614603
GeneID:2614603 KEGG:vch:VC1170 PATRIC:20081432 Uniprot:Q9KST6
Length = 396
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 139/292 (47%), Positives = 193/292 (66%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AKRMG+ I+A TGAGQHGV V+MG D+E+QS V M+L+GA
Sbjct: 95 LLAKRMGKHEIIAETGAGQHGVATALACALLGLKCRVYMGAKDVERQSPNVFRMRLMGAT 154
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W + E ++YL GT GPHP P +VREFQ IIG+ET+ Q
Sbjct: 155 VIPVHSGSATLKDACNEALRDWSASYETAHYLLGTAAGPHPFPTIVREFQRIIGEETKNQ 214
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
+ + G PD ++ACVG GSNA+G+F +FI +E VRLIG+E AG G+ + +H A L G+
Sbjct: 215 ILAREGRLPDAVIACVGGGSNAIGMFADFIEEESVRLIGIEPAGKGIHTHQHGAPLKHGK 274
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G++ G + L+QDE GQ+ ++SV GL++P VGP+ ++L GRAE+ + TD EA+ A
Sbjct: 275 TGIFFGMKAPLMQDEHGQVEESYSVSAGLDFPSVGPQHAYLNAIGRAEYESITDDEALDA 334
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKV-VVNCSGGGDKDVDTV 288
+Q L R EGI PALE+SHALA K+ P+ ++ VVN SG GDKD+ TV
Sbjct: 335 FQALARNEGIIPALESSHALAHAIKMAYAEPDKEQLLVVNLSGRGDKDIFTV 386
>TIGR_CMR|CBU_1155 [details] [associations]
symbol:CBU_1155 "N-(5'phosphoribosyl)anthranilate
isomerase/tryptophan synthase, beta subunit" species:227377
"Coxiella burnetii RSA 493" [GO:0000162 "tryptophan biosynthetic
process" evidence=ISS] [GO:0004640 "phosphoribosylanthranilate
isomerase activity" evidence=ISS] [GO:0004834 "tryptophan synthase
activity" evidence=ISS] [GO:0006568 "tryptophan metabolic process"
evidence=ISS] HAMAP:MF_00133 InterPro:IPR001240 InterPro:IPR006653
InterPro:IPR006654 InterPro:IPR011060 InterPro:IPR013785
InterPro:IPR023026 Pfam:PF00697 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 HAMAP:MF_00135 Pfam:PF00291 SUPFAM:SSF53686
Gene3D:3.20.20.70 EMBL:AE016828 GenomeReviews:AE016828_GR
SUPFAM:SSF51366 GO:GO:0004640 HOGENOM:HOG000161710 OMA:WVANVDS
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 HSSP:P00933
RefSeq:NP_820152.1 ProteinModelPortal:Q83CG3 SMR:Q83CG3
PRIDE:Q83CG3 GeneID:1209057 KEGG:cbu:CBU_1155 PATRIC:17931049
KO:K16187 ProtClustDB:PRK13803 BioCyc:CBUR227377:GJ7S-1144-MONOMER
Uniprot:Q83CG3
Length = 600
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 136/295 (46%), Positives = 189/295 (64%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AK++ + I+A TGAGQHGV ++MG DM++Q+ V MKLLGA
Sbjct: 304 LLAKKLKKTRIIAETGAGQHGVASATACAYFDLRCDIYMGAEDMKRQAPNVERMKLLGAN 363
Query: 61 VKAV---DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V K+A +EA+R+W + E ++Y G+ +GPHP P MV FQS+IGKE + Q
Sbjct: 364 VIPVLAGSQTLKDAVNEALRDWSASYENTHYCLGSALGPHPFPEMVALFQSVIGKEAKTQ 423
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
E+ G +PD ++ACVG GSNA+G+F FI+D VRLIGVEA G G G+HAA +
Sbjct: 424 VHEQTGKQPDAIIACVGGGSNAIGIFSAFIDDPTVRLIGVEAGGKGNQLGEHAAWIKHQR 483
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
GV HG +YLLQDE GQI THS+ GL+YP +GP+ +FL +TGRA + + +D++A+ A
Sbjct: 484 KGVLHGTYTYLLQDENGQIAKTHSISAGLDYPAIGPQHAFLFETGRAIYTSVSDKDALTA 543
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLC-PTLPNGAKVVVNCSGGGDKDVDTVVNY 291
++ L + EGI PALE+SHA+A+L K V+VN SG GDKD+ + Y
Sbjct: 544 FKLLAKTEGIIPALESSHAIAYLLKEGRKKFSRKDIVIVNLSGRGDKDIPALKEY 598
>TIGR_CMR|CPS_1954 [details] [associations]
symbol:CPS_1954 "tryptophan synthase, beta subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006653 InterPro:IPR006654 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0133 HOGENOM:HOG000161710
GO:GO:0004834 PANTHER:PTHR10314:SF3 TIGRFAMs:TIGR00263 KO:K06001
RefSeq:YP_268684.1 ProteinModelPortal:Q483T2 SMR:Q483T2
STRING:Q483T2 GeneID:3518433 KEGG:cps:CPS_1954 PATRIC:21467043
OMA:LNHCMGE ProtClustDB:PRK13028
BioCyc:CPSY167879:GI48-2024-MONOMER Uniprot:Q483T2
Length = 400
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 129/293 (44%), Positives = 186/293 (63%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
++AK +G+K ++A TGAGQHGV + MG D++K+ VL MK+LGA
Sbjct: 103 LLAKHLGKKKLIAETGAGQHGVALATAAAYFGLECEIHMGEVDIKKEYPNVLRMKVLGAT 162
Query: 61 VKAVD-GC--FKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQ 117
V V G KEA A ++ + + Y G+VVGPHP P++VR+FQ +IG E R+Q
Sbjct: 163 VIPVTHGLKTLKEAVDSAFEAYLKDPISTIYCIGSVVGPHPFPMIVRDFQRVIGIEAREQ 222
Query: 118 AMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGKHAATLAKGE 177
++ G PD ++AC+G GSNA+G+F F+ D++ +L G+E AG +G+HAAT+ G+
Sbjct: 223 FLDMTGELPDSVVACIGGGSNAMGIFSSFLEDDETQLFGIEPAGKSFKTGEHAATMTLGK 282
Query: 178 VGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRAEFYTATDQEAVQA 237
G+ HG Y+LQDE G+ HS+ GL+YPGVGPE S L+D + + + TD+E + A
Sbjct: 283 PGLIHGFKCYILQDENGEPAPVHSIASGLDYPGVGPEHSMLKDMNKVTYDSITDKECIDA 342
Query: 238 YQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSGGGDKDVDTVVN 290
+ L RLEGI PALE++HA+A+ KL P + V+VN SG GDKD+D VV+
Sbjct: 343 FYELSRLEGIIPALESAHAVAYAMKLAQKFPEKS-VLVNLSGRGDKDLDYVVD 394
>ASPGD|ASPL0000031491 [details] [associations]
symbol:AN5444 species:162425 "Emericella nidulans"
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0004834 "tryptophan synthase activity"
evidence=RCA] [GO:0006568 "tryptophan metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR006654 InterPro:IPR001926 Pfam:PF00291 SUPFAM:SSF53686
EMBL:BN001305 EMBL:AACD01000094 GO:GO:0000162 eggNOG:COG0133
HOGENOM:HOG000161710 KO:K01696 OMA:WVANVDS GO:GO:0004834
PANTHER:PTHR10314:SF3 RefSeq:XP_663048.1 ProteinModelPortal:Q5B1Y6
STRING:Q5B1Y6 EnsemblFungi:CADANIAT00003645 GeneID:2871734
KEGG:ani:AN5444.2 OrthoDB:EOG43V33Z Uniprot:Q5B1Y6
Length = 443
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 111/295 (37%), Positives = 155/295 (52%)
Query: 1 MIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQ 60
+ A+ +G+ I G HG+ + MG +D+ Q V MK LGA
Sbjct: 160 LFAQHIGKTEISMECGFAGHGLFCATMCARMNMKCTILMGASDIAAQPDAVEEMKQLGAT 219
Query: 61 VKAVD--------GCFKEASSEAIRNWVGNLEKSYYL-TGTVVGPHPCPIMVREFQSIIG 111
V +V G + A++EA+R + L +Y++ TGTV GPHP P + R FQS++G
Sbjct: 220 VVSVQCSISDDGSGTLRAATNEALRYSLTRLNSTYHISTGTV-GPHPLPTITRTFQSLLG 278
Query: 112 KETRKQAMEKWG-GK------PDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGL 164
+E + + E G G+ P L++ SG+ ALG+F FI+D VRLI VEAA
Sbjct: 279 QEIKICSSELPGRGRRKNNFRPSALVST--SGAAALGMFAPFISDPAVRLIAVEAAD--- 333
Query: 165 DSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLRDTGRA 224
AA L G GV +G + LLQDE GQIL +HS+ L +P GPE++ RD GR
Sbjct: 334 -----AAPLTHGSPGVMYGCKTLLLQDENGQILPSHSISPDLNFPCAGPELAHWRDLGRL 388
Query: 225 EFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKLCPTLPNGAKVVVNCSG 279
E TA+ +EAV+ + LC EGI P L SHA+ ++ L G VV+ SG
Sbjct: 389 ETVTASSEEAVRGLRILCESEGIVPGLATSHAVLETVRVARQLGIGKDVVLLISG 443
>TIGR_CMR|GSU_2379 [details] [associations]
symbol:GSU_2379 "pyridoxal-phosphate dependent enzyme"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004834
"tryptophan synthase activity" evidence=ISS] HAMAP:MF_00133
InterPro:IPR006316 InterPro:IPR006653 InterPro:IPR023026
PIRSF:PIRSF001413 PROSITE:PS00168 UniPathway:UPA00035
InterPro:IPR001926 Pfam:PF00291 GO:GO:0030170 SUPFAM:SSF53686
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004834
HOGENOM:HOG000161709 KO:K06001 OMA:TPAKIYY PANTHER:PTHR10314:SF21
TIGRFAMs:TIGR01415 ProtClustDB:PRK12391 RefSeq:NP_953425.1
HSSP:P00933 ProteinModelPortal:Q74AH6 GeneID:2688048
KEGG:gsu:GSU2379 PATRIC:22027605
BioCyc:GSUL243231:GH27-2337-MONOMER Uniprot:Q74AH6
Length = 451
Score = 193 (73.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 90/309 (29%), Positives = 134/309 (43%)
Query: 4 KRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQV-- 61
K+ G + + TGAGQ G V+M ++ + +M+L GA V
Sbjct: 123 KQAGIRRLATETGAGQWGSSLALACSMFGLECTVYMVKVSCTQKPYRKSMMQLWGANVIP 182
Query: 62 ---------KAV-------DGCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVRE 105
+++ +G A SEA+ + + +Y L G+V+ H C
Sbjct: 183 SPSEFTNAGRSILAHDPDSNGSLGIAISEAVEDAASRADTNYAL-GSVLN-HVCL----- 235
Query: 106 FQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFIND----EDVRLIGVEAAG 161
Q+IIG+E R+Q + G PDV++AC G GSN G F+ D ++VR + VE A
Sbjct: 236 HQTIIGQEAREQ-LALAGDYPDVVIACCGGGSNFAGTAFPFLADRAAGKNVRCLAVEPAS 294
Query: 162 FG-LDSGKHAATLAKGEVGVYHG-AMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFLR 219
L G +A G+ AM Y L + G H+ G GL Y G P +S L
Sbjct: 295 CPTLTKGIYAFDY--GDTAKMAPIAMMYTL-GHDFMPPGIHA-G-GLRYHGESPLVSQLH 349
Query: 220 DTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHAL-AFLEKLCPTLPNGA-KVVVNC 277
G E + +A R EGI PA E+SHA+ A +++ G K ++ C
Sbjct: 350 HAGLIEAKSYRQTACFEAAHLFARHEGIVPAPESSHAVRAAIDEAVIAKEEGKEKTILFC 409
Query: 278 -SGGGDKDV 285
SG G D+
Sbjct: 410 LSGHGQLDM 418
>TIGR_CMR|CHY_0751 [details] [associations]
symbol:CHY_0751 "putative tryptophan synthase, beta
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004834 "tryptophan synthase activity" evidence=ISS]
HAMAP:MF_00133 InterPro:IPR006316 InterPro:IPR023026
PIRSF:PIRSF001413 UniPathway:UPA00035 InterPro:IPR001926
Pfam:PF00291 GO:GO:0030170 SUPFAM:SSF53686 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0004834 eggNOG:COG1350
HOGENOM:HOG000161709 KO:K06001 OMA:TPAKIYY PANTHER:PTHR10314:SF21
TIGRFAMs:TIGR01415 RefSeq:YP_359605.1 STRING:Q3AE29 GeneID:3727325
KEGG:chy:CHY_0751 PATRIC:21274636 ProtClustDB:PRK12391
BioCyc:CHYD246194:GJCN-751-MONOMER Uniprot:Q3AE29
Length = 425
Score = 176 (67.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 86/315 (27%), Positives = 133/315 (42%)
Query: 7 GRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQV----- 61
G + + TGAGQ G V+M +++ + + M+ GA+V
Sbjct: 120 GTEQLTTETGAGQWGSALAYAANFFGLKLTVYMVGISYDQKPYRRIFMETFGARVVKSPS 179
Query: 62 -------KAVD------GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQS 108
K ++ G A SEA+ + + K+ Y G+V+ H +++ Q+
Sbjct: 180 PETAAGRKVLEADPNSPGSLGIAISEAVEVAMSD-PKTKYALGSVLD-H---VLLH--QT 232
Query: 109 IIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFIND----EDVRLIGVEAAGFGL 164
+IG+E ++ + G KPDVL+ACVG GSN G F+ + E++ +I VE
Sbjct: 233 VIGQEVYEE-LSLLGEKPDVLIACVGGGSNFGGFTFPFVREKLKGENIEIIAVEP----- 286
Query: 165 DSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSV--GV---GLEYPGVGPEISFLR 219
K TL +GE G ++ L LG + G+ GL Y G P +S L
Sbjct: 287 ---KACPTLTEGEYKYDFGDVAGLTPKMPMYTLGYDFIPPGIHAGGLRYHGDSPLVSLLY 343
Query: 220 DTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFL--EKLCPTLPNGAKVVV-N 276
+ +A R EGI PA E+SHA+A E + + AK +V N
Sbjct: 344 KNKIISAKAYPQLKVFEAGVTFARTEGIIPAPESSHAIAAAIDEAIKCREESVAKTIVFN 403
Query: 277 CSGGGDKDVDTVVNY 291
SG G D+ Y
Sbjct: 404 LSGHGYFDLSAYEAY 418
>TAIR|locus:2159838 [details] [associations]
symbol:TSBtype2 "tryptophan synthase beta type 2"
species:3702 "Arabidopsis thaliana" [GO:0000162 "tryptophan
biosynthetic process" evidence=IEA;ISS;IDA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004834 "tryptophan synthase activity"
evidence=IEA;ISS] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0052684 "L-serine
hydro-lyase (adding indole, L-tryptophan-forming) activity"
evidence=IDA] HAMAP:MF_00133 InterPro:IPR006316 InterPro:IPR023026
InterPro:IPR001926 Pfam:PF00291 EMBL:AB005231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0042803 GO:GO:0030170
SUPFAM:SSF53686 GO:GO:0000162 GO:GO:0004834 EMBL:AY081349
EMBL:BT000255 IPI:IPI00517404 RefSeq:NP_198669.1 UniGene:At.20935
ProteinModelPortal:Q9FFW8 SMR:Q9FFW8 IntAct:Q9FFW8 STRING:Q9FFW8
PaxDb:Q9FFW8 PRIDE:Q9FFW8 EnsemblPlants:AT5G38530.1 GeneID:833841
KEGG:ath:AT5G38530 TAIR:At5g38530 eggNOG:COG1350
HOGENOM:HOG000161709 InParanoid:Q9FFW8 KO:K06001 OMA:TPAKIYY
PhylomeDB:Q9FFW8 ProtClustDB:CLSN2687111
BioCyc:ARA:AT5G38530-MONOMER BioCyc:MetaCyc:AT5G38530-MONOMER
ArrayExpress:Q9FFW8 Genevestigator:Q9FFW8 GO:GO:0052684
PANTHER:PTHR10314:SF21 TIGRFAMs:TIGR01415 Uniprot:Q9FFW8
Length = 506
Score = 168 (64.2 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 83/311 (26%), Positives = 123/311 (39%)
Query: 7 GRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQVKAVDG 66
G K++V TGAGQ G V+ + + L+M+ GA+V
Sbjct: 181 GVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSPS 240
Query: 67 CFKEAS------------------SEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVREFQS 108
EA SEA+ N E + Y G+V+ H +++ Q+
Sbjct: 241 DLTEAGRRILESDPSSPGSLGIAISEAVEVAARN-EDTKYCLGSVLN-H---VLLH--QT 293
Query: 109 IIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDEDVRLIGVEAAGFGLDSGK 168
IIG+E +Q ME +G PD+++ C G GSN GL FI + +L G
Sbjct: 294 IIGEECIQQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIRE---KLKGKINPVIRAVEPS 349
Query: 169 HAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSV-----GVGLEYPGVGPEISFLRDTGR 223
+L KG G + L + LG + GL Y G+ P IS + + G
Sbjct: 350 ACPSLTKGVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGF 409
Query: 224 AEFYTATDQEAVQAYQRLCRLEGIFPALEASHALA--FLEKL-CPTLPNGAKVVVNCSGG 280
E + E Q + R EGI PA E +HA+A E L C +++ G
Sbjct: 410 MEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGH 469
Query: 281 GDKDVDTVVNY 291
G D+ + Y
Sbjct: 470 GHFDLTSYDKY 480
>UNIPROTKB|Q3Z7P8 [details] [associations]
symbol:trpB "Tryptophan synthase beta chain" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00133 InterPro:IPR006316 InterPro:IPR006653
InterPro:IPR023026 PIRSF:PIRSF001413 PROSITE:PS00168
UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291 GO:GO:0030170
SUPFAM:SSF53686 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0004834 eggNOG:COG1350 HOGENOM:HOG000161709 KO:K06001
OMA:TPAKIYY PANTHER:PTHR10314:SF21 TIGRFAMs:TIGR01415
ProtClustDB:PRK12391 RefSeq:YP_181751.1 ProteinModelPortal:Q3Z7P8
STRING:Q3Z7P8 GeneID:3229679 KEGG:det:DET1035 PATRIC:21609117
BioCyc:DETH243164:GJNF-1036-MONOMER Uniprot:Q3Z7P8
Length = 454
Score = 160 (61.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 87/311 (27%), Positives = 131/311 (42%)
Query: 4 KRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQV-- 61
K+ G K I TGAGQ G V+M + + ++M+ GA V
Sbjct: 124 KKAGIKRISTETGAGQWGSSLAMACKFFDIECKVYMVKVSYNMKPYRRVMMETWGASVVP 183
Query: 62 -KAVD---------------GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVRE 105
+ D G A SEA+ + V + Y L G+V+ H +++
Sbjct: 184 SPSPDTKIGREILERDPECPGSLGIAISEAVEDAVTHPGTKYAL-GSVLN-H---VLLH- 237
Query: 106 FQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDE------DVRLIGVEA 159
Q+IIG+E +KQ M PD+++ CVG GSN G+ F+ D+ D R++ VE
Sbjct: 238 -QTIIGQEAKKQ-MAMADCYPDIVIGCVGGGSNFGGIALPFVEDKLNGTHKDTRIMAVEP 295
Query: 160 AGF-GLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFL 218
A L G A E G+ + L Q + GL Y G+ P +S L
Sbjct: 296 ASCPSLTKGLDAYDFGD-EAGMTPMMKMFTLGH---QFMPPPVHAGGLRYHGMSPLLSHL 351
Query: 219 RDTGRAEFYTATDQ-EAVQAYQRLCRLEGIFPALEASHAL-AFLEKLCPTLPNG-AKVVV 275
E TA +Q E +A + + EG A E +HA+ A +++ G AK ++
Sbjct: 352 SRLNLIEA-TAVNQIETFEAGIQFAQTEGFISAPETNHAIRATIDEALKCRETGEAKTIL 410
Query: 276 NC-SGGGDKDV 285
C SG G D+
Sbjct: 411 FCHSGHGHVDM 421
>TIGR_CMR|DET_1035 [details] [associations]
symbol:DET_1035 "pyridoxal-phosphate dependent TrpB-like
enzyme" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00133 InterPro:IPR006316
InterPro:IPR006653 InterPro:IPR023026 PIRSF:PIRSF001413
PROSITE:PS00168 UniPathway:UPA00035 InterPro:IPR001926 Pfam:PF00291
GO:GO:0030170 SUPFAM:SSF53686 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004834 eggNOG:COG1350
HOGENOM:HOG000161709 KO:K06001 OMA:TPAKIYY PANTHER:PTHR10314:SF21
TIGRFAMs:TIGR01415 ProtClustDB:PRK12391 RefSeq:YP_181751.1
ProteinModelPortal:Q3Z7P8 STRING:Q3Z7P8 GeneID:3229679
KEGG:det:DET1035 PATRIC:21609117
BioCyc:DETH243164:GJNF-1036-MONOMER Uniprot:Q3Z7P8
Length = 454
Score = 160 (61.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 87/311 (27%), Positives = 131/311 (42%)
Query: 4 KRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLLGAQV-- 61
K+ G K I TGAGQ G V+M + + ++M+ GA V
Sbjct: 124 KKAGIKRISTETGAGQWGSSLAMACKFFDIECKVYMVKVSYNMKPYRRVMMETWGASVVP 183
Query: 62 -KAVD---------------GCFKEASSEAIRNWVGNLEKSYYLTGTVVGPHPCPIMVRE 105
+ D G A SEA+ + V + Y L G+V+ H +++
Sbjct: 184 SPSPDTKIGREILERDPECPGSLGIAISEAVEDAVTHPGTKYAL-GSVLN-H---VLLH- 237
Query: 106 FQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLFHEFINDE------DVRLIGVEA 159
Q+IIG+E +KQ M PD+++ CVG GSN G+ F+ D+ D R++ VE
Sbjct: 238 -QTIIGQEAKKQ-MAMADCYPDIVIGCVGGGSNFGGIALPFVEDKLNGTHKDTRIMAVEP 295
Query: 160 AGF-GLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGQILGTHSVGVGLEYPGVGPEISFL 218
A L G A E G+ + L Q + GL Y G+ P +S L
Sbjct: 296 ASCPSLTKGLDAYDFGD-EAGMTPMMKMFTLGH---QFMPPPVHAGGLRYHGMSPLLSHL 351
Query: 219 RDTGRAEFYTATDQ-EAVQAYQRLCRLEGIFPALEASHAL-AFLEKLCPTLPNG-AKVVV 275
E TA +Q E +A + + EG A E +HA+ A +++ G AK ++
Sbjct: 352 SRLNLIEA-TAVNQIETFEAGIQFAQTEGFISAPETNHAIRATIDEALKCRETGEAKTIL 410
Query: 276 NC-SGGGDKDV 285
C SG G D+
Sbjct: 411 FCHSGHGHVDM 421
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 281 0.00083 115 3 11 22 0.38 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 605 (64 KB)
Total size of DFA: 190 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.19u 0.35s 19.54t Elapsed: 00:00:02
Total cpu time: 19.19u 0.35s 19.54t Elapsed: 00:00:02
Start: Fri May 10 06:24:34 2013 End: Fri May 10 06:24:36 2013