BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022575
(295 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 14/212 (6%)
Query: 48 EILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
E+ LG +K FS L+ A+ NF ++LG GGFG V+KG R G ++AV
Sbjct: 19 EVHLG-QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADGTLVAV 67
Query: 108 KRLNQESLQG-HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF 166
KRL +E QG L++ TE++ + H NL++L G+C+ RLLVY +M GS+ + L
Sbjct: 68 KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSD-KAKVIYRDFKTSNILLDLNYNAKLSDFG 225
R PL W R ++ALG+A+GLAYLH K+I+RD K +NILLD + A + DFG
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 226 LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATG 257
LAK HV V GT G+ APEY++TG
Sbjct: 188 LAKLMDY-KDXHVXXAVRGTIGHIAPEYLSTG 218
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 14/212 (6%)
Query: 48 EILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAV 107
E+ LG +K FS L+ A+ NF ++LG GGFG V+KG R G ++AV
Sbjct: 11 EVHLG-QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAV 59
Query: 108 KRLNQESLQG-HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF 166
KRL +E QG L++ TE++ + H NL++L G+C+ RLLVY +M GS+ + L
Sbjct: 60 KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSD-KAKVIYRDFKTSNILLDLNYNAKLSDFG 225
R PL W R ++ALG+A+GLAYLH K+I+RD K +NILLD + A + DFG
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 226 LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATG 257
LAK HV V G G+ APEY++TG
Sbjct: 180 LAKLMDY-KDXHVXXAVRGXIGHIAPEYLSTG 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 121/207 (58%), Gaps = 22/207 (10%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRAS 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL R S
Sbjct: 74 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLS 122
Query: 171 YIQ---PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ +Q+ + +R++GT Y APE +
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEAL 207
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 22/207 (10%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRAS 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL R S
Sbjct: 74 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLS 122
Query: 171 YIQ---PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ +Q+ + R++GT Y APE +
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEAL 207
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 119/207 (57%), Gaps = 22/207 (10%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV +GEGGFG V+KG+++ T A + + I + L
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRAS 170
Q+ Q EIK + + H NLV+L+G+ + D LVY +MP GSL R S
Sbjct: 68 KQQFDQ-------EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLS 116
Query: 171 YIQ---PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+ PLSW +R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLA 174
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ +Q + R++GT Y APE +
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEAL 201
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 19/225 (8%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
L+ AT NF ++G G FG V+KG + + G +A+KR ES QG E+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFE 83
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
TEI+ L HP+LV LIG+C E + +L+Y++M G+L+ HL+ +SW R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ +GAA+GL YLH+ +I+RD K+ NILLD N+ K++DFG++K G Q+H+ V
Sbjct: 144 ICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 243 MGTYGYAAPEYMATG-------IFQLVLLLFTFECSLLHFSLQLP 280
GT GY PEY G ++ ++LF C+ LP
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 19/225 (8%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
L+ AT NF ++G G FG V+KG + + G +A+KR ES QG E+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEFE 83
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
TEI+ L HP+LV LIG+C E + +L+Y++M G+L+ HL+ +SW R++
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ +GAA+GL YLH+ +I+RD K+ NILLD N+ K++DFG++K G Q+H+ V
Sbjct: 144 ICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 243 MGTYGYAAPEYMATG-------IFQLVLLLFTFECSLLHFSLQLP 280
GT GY PEY G ++ ++LF C+ LP
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 124/233 (53%), Gaps = 23/233 (9%)
Query: 57 SFSFNGLKTATRNF--RPDSV----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
SFSF LK T NF RP SV GEGGFG V+KG+++ T A + + I + L
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 111 NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRAS 170
Q+ Q EIK + H NLV+L+G+ + D LVY + P GSL R S
Sbjct: 65 KQQFDQ-------EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----LDRLS 113
Query: 171 YIQ---PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+ PLSW R K+A GAA G+ +LH + I+RD K++NILLD + AK+SDFGLA
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLP 280
+ +Q +R++GT Y APE + G +++F LL LP
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLYHP 134
LGEG FG V + Y P TG +AVK L ES H+ L EI+ L LYH
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 135 NLVKLIGYCLED--DHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
N+VK G C ED + L+ EF+P GSL+ +L + + I + ++K A+ KG+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAVQICKGMD 140
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV--STRVMGTYGYAA 250
YL S + ++RD N+L++ + K+ DFGL K T + R + Y A
Sbjct: 141 YLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 197
Query: 251 PEYMATGIFQLVLLLFTFECSL 272
PE + F + +++F +L
Sbjct: 198 PECLMQSKFYIASDVWSFGVTL 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLYHP 134
LGEG FG V + Y P TG +AVK L ES H+ L EI+ L LYH
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 135 NLVKLIGYCLED--DHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
N+VK G C ED + L+ EF+P GSL+ +L + + I + ++K A+ KG+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI---NLKQQLKYAVQICKGMD 128
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV--STRVMGTYGYAA 250
YL S + ++RD N+L++ + K+ DFGL K T + R + Y A
Sbjct: 129 YLGS--RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-A 185
Query: 251 PEYMATGIFQLVLLLFTFECSL 272
PE + F + +++F +L
Sbjct: 186 PECLMQSKFYIASDVWSFGVTL 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 31/189 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
L HPN+VKL Y L + +V EF+P G L + L +A P+ W++++++ L A
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIA 132
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQSHVSTRVM 243
G+ Y+ + +++RD ++ NI L L+ N AK++DFGL++ H + ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLL 187
Query: 244 GTYGYAAPE 252
G + + APE
Sbjct: 188 GNFQWMAPE 196
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 33/190 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
L HPN+VKL Y L + +V EF+P G L + L +A P+ W++++++ L A
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIA 132
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQS-HVSTRV 242
G+ Y+ + +++RD ++ NI L L+ N AK++DFG T QS H + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------TSQQSVHSVSGL 186
Query: 243 MGTYGYAAPE 252
+G + + APE
Sbjct: 187 LGNFQWMAPE 196
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 31/189 (16%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-------NQESLQGHLEWLTEIKHL 128
+G+GGFG V KG + + V+A+K L E ++ E+ E+ +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
L HPN+VKL Y L + +V EF+P G L + L +A P+ W++++++ L A
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIA 132
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLD-LNYN----AKLSDFGLAKDGPTGSQSHVSTRVM 243
G+ Y+ + +++RD ++ NI L L+ N AK++DF L++ H + ++
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLL 187
Query: 244 GTYGYAAPE 252
G + + APE
Sbjct: 188 GNFQWMAPE 196
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + H W EI L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+++K G C + + LV E++P GSL ++L R + + L + A +G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMA 131
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
YLHS I+R+ N+LLD + K+ DFGLAK P G +
Sbjct: 132 YLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L ++ H W EI L LYH
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 135 NLVKLIGYCLEDDHRL---LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGL 191
+++K G C ED LV E++P GSL ++L R + + L + A +G+
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGM 147
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AYLH+ I+RD N+LLD + K+ DFGLAK P G + +
Sbjct: 148 AYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ EF+P GSL +L + R +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CK 128
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 187 YAPESLTESKFSVASDVWSF 206
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 59 SFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH 118
S N + R+ + LG+G FG V + Y P + TG V+AVK+L Q S + H
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEH 72
Query: 119 L-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYI 172
L ++ EI+ L L H N+VK G C R L+ E++P GSL ++L + R +I
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+ L +T ++ KG+ YL + + I+RD T NIL++ K+ DFGL K P
Sbjct: 133 KLLQYTSQI------CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 233 GSQ-SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ V + APE + F + +++F
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 59 SFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH 118
S N + R+ + LG+G FG V + Y P + TG V+AVK+L Q S + H
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEH 72
Query: 119 L-EWLTEIKHLGQLYHPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYI 172
L ++ EI+ L L H N+VK G C R L+ E++P GSL ++L + R +I
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+ L +T ++ KG+ YL + + I+RD T NIL++ K+ DFGL K P
Sbjct: 133 KLLQYTSQI------CKGMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 233 GSQ-SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ V + APE + F + +++F
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLY 132
+G G FG V + W G +AVK L ++ E+L E+ + +L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN+V +G + + +V E++ +GSL L + + Q L R+ +A AKG+
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMN 151
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +++RD K+ N+L+D Y K+ DFGL++ S S GT + APE
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 253 YM 254
+
Sbjct: 210 VL 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 128
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 187 YAPESLTESKFSVASDVWSF 206
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 130
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 131 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 189 YAPESLTESKFSVASDVWSF 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 37/202 (18%)
Query: 73 DSVLGEGGFGCVFKG-WI-DEHTYAPAR--PGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ ++G GGFG V++ WI DE AR P + ++ + QE+ K
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEA-----------KLF 60
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
L HPN++ L G CL++ + LV EF G L L I P I + A+ A
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPP---DILVNWAVQIA 115
Query: 189 KGLAYLHSDK-AKVIYRDFKTSNILL-------DL-NYNAKLSDFGLAKDGPTGSQSHVS 239
+G+ YLH + +I+RD K+SNIL+ DL N K++DFGLA+ + H +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRT 169
Query: 240 TRV--MGTYGYAAPEYMATGIF 259
T++ G Y + APE + +F
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMF 191
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 70
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 124
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 125 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 183 YAPESLTESKFSVASDVWSF 202
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 184 YAPESLTESKFSVASDVWSF 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 102
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 156
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 157 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 215 YAPESLTESKFSVASDVWSF 234
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 77
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 131
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 132 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 190 YAPESLTESKFSVASDVWSF 209
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 78
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 132
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 133 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 191 YAPESLTESKFSVASDVWSF 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 184 YAPESLTESKFSVASDVWSF 203
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 69
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 123
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 124 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 182 YAPESLTESKFSVASDVWSF 201
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + H W EI L LYH
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+++K G C + + LV E++P GSL ++L R + + L + A +G+A
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMA 131
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
YLH+ I+R+ N+LLD + K+ DFGLAK P G +
Sbjct: 132 YLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 75
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 129
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 130 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 188 YAPESLTESKFSVASDVWSF 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
+G G FG V + + H G +AVK L ++ E+L E+ + +L H
Sbjct: 45 IGAGSFGTVHRA--EWH---------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PN+V +G + + +V E++ +GSL L + + Q L R+ +A AKG+ Y
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNY 152
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 253
LH+ +++R+ K+ N+L+D Y K+ DFGL S+ ST + PE+
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL-------SRLKASTFLSSKSAAGTPEW 205
Query: 254 MATGIFQ 260
MA + +
Sbjct: 206 MAPEVLR 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 74
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHL---FRRASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L R +I+ L +T ++ K
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CK 128
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 129 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 187 YAPESLTESKFSVASDVWSF 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 125
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ-SHVSTRVMGTYGY 248
G+ YL + + I+RD T NIL++ K+ DFGL K P + V +
Sbjct: 126 GMEYLGT--KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 184 YAPESLTESKFSVASDVWSF 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 21/200 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQLYHP 134
LG+G FG V + Y P + TG V+AVK+L Q S + HL ++ EI+ L L H
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHD 72
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAK 189
N+VK G C R L+ E++P GSL ++L + R +I+ L +T ++ K
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CK 126
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH-VSTRVMGTYGY 248
G+ YL + + I+R+ T NIL++ K+ DFGL K P + + V +
Sbjct: 127 GMEYLGT--KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE + F + +++F
Sbjct: 185 YAPESLTESKFSVASDVWSF 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + Q W EI+ L LYH
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
++VK G C + + LV E++P GSL ++L R + L + A +G+A
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 126
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
YLH+ I+R N+LLD + K+ DFGLAK P G +
Sbjct: 127 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 167
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG FG V + Y P GTG ++AVK L + Q W EI+ L LYH
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 135 NLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
++VK G C + + LV E++P GSL ++L R + L + A +G+A
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMA 125
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
YLH+ I+R N+LLD + K+ DFGLAK P G +
Sbjct: 126 YLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 166
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 142
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 143 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 162
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 163 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 201
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 161
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 162 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 200
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 135
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 136 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 174
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 143
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 144 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 142
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 143 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 181
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 141 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 179
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 143
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 144 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 141
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 142 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 138
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ YL S K ++RD N +LD + K++DFGLA+D
Sbjct: 139 KGMKYLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 177
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 94 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 147
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 202
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 203 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 141
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 142 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 180
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 148
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 149 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 187
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 68 RNFRPDS-----VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
R FRP VLG+G FG K E TG V+ +K L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFL 55
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
E+K + L HPN++K IG +D + E++ G+L + S W+ R+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVS 112
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA------KDGPTGSQS 236
A A G+AYLHS +I+RD + N L+ N N ++DFGLA K P G +S
Sbjct: 113 FAKDIASGMAYLHS--MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 237 ------HVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
V+G + APE + + + +F+F
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 143
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 144 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 144
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 145 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 144
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 145 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 183
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
+ V+G G FGCV+ G + ++ G + AVK LN+ + G + ++LTE +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 132 YHPNLVKLIGYCLEDD-HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG--AA 188
HPN++ L+G CL + L+V +M G L N F R P T++ + G A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNP---TVKDLIGFGLQVA 143
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
KG+ +L S K ++RD N +LD + K++DFGLA+D
Sbjct: 144 KGMKFLAS--KKFVHRDLAARNCMLDEKFTVKVADFGLARD 182
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLY 132
VLG G FG V+KG + P + +A+K LN+ + + ++E++ E + +
Sbjct: 44 KVLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKVALGAAK 189
HP+LV+L+G CL +L V + MP G L ++ I L+W +++ AK
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AK 151
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+ YL ++ ++++RD N+L+ + K++DFGLA+
Sbjct: 152 GMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLY 132
VLG G FG V+KG + P + +A+K LN+ + + ++E++ E + +
Sbjct: 21 KVLGSGAFGTVYKG-----IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKVALGAAK 189
HP+LV+L+G CL +L V + MP G L ++ I L+W +++ AK
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AK 128
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+ YL ++ ++++RD N+L+ + K++DFGLA+
Sbjct: 129 GMMYL--EERRLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQFGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSY 109
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 167 -TLWYRAPEIL 176
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 168 -TLWYRAPEIL 177
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ S++ F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 59 SFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ 112
S + TR+ P+ LG+G FG V+K E T ++ A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDT 72
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI 172
+S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--- 129
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 233 GSQSHVSTRVMGTYGYAAPEYM 254
Q S +GT + APE +
Sbjct: 188 TIQRRDS--FIGTPYWMAPEVV 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 59 SFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ 112
S + TR+ P+ LG+G FG V+K E T ++ A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDT 72
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI 172
+S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--- 129
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 233 GSQSHVSTRVMGTYGYAAPEYM 254
Q S +GT + APE +
Sbjct: 188 XIQRRDS--FIGTPYWMAPEVV 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL- 131
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L
Sbjct: 31 DVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 83
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQP-----------LSWTI 179
+HPN++ L+G C + L E+ P G+L + L + R P LS
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+ A A+G+ YL + + I+RD NIL+ NY AK++DFGL++
Sbjct: 144 LLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL- 131
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L
Sbjct: 21 DVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 73
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQP-----------LSWTI 179
+HPN++ L+G C + L E+ P G+L + L + R P LS
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+ A A+G+ YL + + I+RD NIL+ NY AK++DFGL++
Sbjct: 134 LLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWL-TE 124
+F+ ++LG+G F V++ TG+ +A+K ++++++ G ++ + E
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+K QL HP++++L Y + ++ LV E G + +L R ++P S
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFM 118
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
G+ YLHS +++RD SN+LL N N K++DFGLA + H + + G
Sbjct: 119 HQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 245 TYGYAAPE 252
T Y +PE
Sbjct: 175 TPNYISPE 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 66 ATRNFRPDS---VLGE-GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
TR+ P+ ++GE G FG V+K E T ++ A K ++ +S + ++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM 181
+ EI L HPN+VKL+ +++ ++ EF G+++ + +PL+ +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQ 111
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL-AKDGPTGSQSHVST 240
V L YLH +K +I+RD K NIL L+ + KL+DFG+ AK+ T Q S
Sbjct: 112 VVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS- 168
Query: 241 RVMGTYGYAAPEYM 254
+GT + APE +
Sbjct: 169 -FIGTPYWMAPEVV 181
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T +
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEV 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 VTLWYRAPEIL 176
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 59 SFNGLKTATRNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ 112
S + TR+ P+ LG+G FG V+K E T ++ A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDT 72
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI 172
+S + +++ EI L HPN+VKL+ +++ ++ EF G+++ +
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--- 129
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+PL+ + V L YLH +K +I+RD K NIL L+ + KL+DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 187
Query: 233 GSQSHVSTRVMGTYGYAAPEYM 254
Q +GT + APE +
Sbjct: 188 XIQRR--DXFIGTPYWMAPEVV 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 168 WYRAPEIL 175
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 167 WYRAPEIL 174
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 168 WYRAPEIL 175
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 167 WYRAPEIL 174
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTL 174
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 175 WYRAPEIL 182
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 19 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 68
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 184 YNKFSIKSDVWAF 196
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 168 WYRAPEIL 175
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 61
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 118
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 119 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARA--FGVPVRTYTHEVVTL 174
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 175 WYRAPEIL 182
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 58
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 115
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 116 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 171
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 172 WYRAPEIL 179
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 128
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 129 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 187 YNKFSIKSDVWAF 199
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 99/231 (42%), Gaps = 20/231 (8%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + +L H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLE 128
Query: 155 FMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 211
M G L++ L R S L+ + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 212 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
LL AK+ DFG+A+D S M + PE GIF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 29/200 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 22 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 128
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-------DGPTGSQSHVSTRVMGTYGY 248
+K I+RD N L+ N+ K++DFGL++ P G++ + +
Sbjct: 129 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------W 179
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE +A F + ++ F
Sbjct: 180 TAPESLAYNKFSIKSDVWAF 199
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 190
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 29/200 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 129
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-------DGPTGSQSHVSTRVMGTYGY 248
+K I+RD N L+ N+ K++DFGL++ P G++ + +
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--------W 180
Query: 249 AAPEYMATGIFQLVLLLFTF 268
APE +A F + ++ F
Sbjct: 181 TAPESLAYNKFSIKSDVWAF 200
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V K W +A+K++ ES + + E++ L ++
Sbjct: 14 EEVVGRGAFGVVCKAKW------------RAKDVAIKQIESESERKAF--IVELRQLSRV 59
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI---RMKVALGAA 188
HPN+VKL G CL + LV E+ GSL N L +PL + M L +
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCS 113
Query: 189 KGLAYLHSDKAK-VIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+G+AYLHS + K +I+RD K N+LL K+ DFG A D Q+H+ T G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSA 168
Query: 247 GYAAPE 252
+ APE
Sbjct: 169 AWMAPE 174
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSY 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 -TLWYRAPEIL 175
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI +L L HP+++KL D ++V E+ N LF +S +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 117
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DG-----PTGSQ 235
+ Y H + K+++RD K N+LLD + N K++DFGL+ DG GS
Sbjct: 118 FQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 236 SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
++ + V+ YA PE ++ ++L+ C L F
Sbjct: 176 NYAAPEVISGKLYAGPE---VDVWSCGVILYVMLCRRLPFD 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V+ G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 40 LGGGQYGEVYVGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 89
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + +V E+MP G+L ++L R + ++ + + +A + + YL
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYL- 146
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 147 -EKKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 204
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 205 YNTFSIKSDVWAF 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ V+G G FG V K W +A+K++ ES + + E++ L ++
Sbjct: 13 EEVVGRGAFGVVCKAKW------------RAKDVAIKQIESESERKAF--IVELRQLSRV 58
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI---RMKVALGAA 188
HPN+VKL G CL + LV E+ GSL N L +PL + M L +
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSWCLQCS 112
Query: 189 KGLAYLHSDKAK-VIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+G+AYLHS + K +I+RD K N+LL K+ DFG A D Q+H+ T G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKGSA 167
Query: 247 GYAAPE 252
+ APE
Sbjct: 168 AWMAPE 173
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI +L L HP+++KL D ++V E+ N LF +S +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRF 118
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DG-----PTGSQ 235
+ Y H + K+++RD K N+LLD + N K++DFGL+ DG GS
Sbjct: 119 FQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 236 SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
++ + V+ YA PE ++ ++L+ C L F
Sbjct: 177 NYAAPEVISGKLYAGPE---VDVWSCGVILYVMLCRRLPFD 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEIKHLGQL- 131
V+GEG FG V K I + G M A+KR+ + S H ++ E++ L +L
Sbjct: 28 DVIGEGNFGQVLKARI-------KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 80
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQP-----------LSWTI 179
+HPN++ L+G C + L E+ P G+L + L + R P LS
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+ A A+G+ YL + + I+R+ NIL+ NY AK++DFGL++
Sbjct: 141 LLHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 23/224 (10%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQG- 117
+K+ + + LGEG F V+K T ++A+K++ E+ G
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKA---------RDKNTNQIVAIKKIKLGHRSEAKDGI 55
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
+ L EIK L +L HPN++ L+ + LV++FM + LE + + + P
Sbjct: 56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHI 114
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
M + L +GL YLH + +++RD K +N+LLD N KL+DFGLAK GS +
Sbjct: 115 KAYMLMTL---QGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKS--FGSPNR 167
Query: 238 VSTRVMGTYGYAAPEYM-ATGIFQLVLLLFTFECSLLHFSLQLP 280
+ T Y APE + ++ + + ++ C L L++P
Sbjct: 168 AYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 228 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 277
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q +S + + +A + + YL
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYL- 334
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 335 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 392
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 393 YNKFSIKSDVWAF 405
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI +L L HP+++KL D ++V E+ N LF +S +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRF 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DG-----PTGSQ 235
+ Y H + K+++RD K N+LLD + N K++DFGL+ DG GS
Sbjct: 109 FQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 166
Query: 236 SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
++ + V+ YA PE ++ ++L+ C L F
Sbjct: 167 NYAAPEVISGKLYAGPE---VDVWSCGVILYVMLCRRLPFD 204
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 25 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 74
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 132 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 189
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 190 YNKFSIKSDVWAF 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 26 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 191 YNKFSIKSDVWAF 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-----QGHLEWLT 123
N++ LGEG FG V + HT TG +A+K +N++ L QG +E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---HT------TTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI +L L HP+++KL D ++V E+ N LF +S +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRF 112
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DG-----PTGSQ 235
+ Y H + K+++RD K N+LLD + N K++DFGL+ DG GS
Sbjct: 113 FQQIISAVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP 170
Query: 236 SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
++ + V+ YA PE ++ ++L+ C L F
Sbjct: 171 NYAAPEVISGKLYAGPE---VDVWSCGVILYVMLCRRLPFD 208
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 -TLWYRAPEIL 175
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GL++ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 112 LLQGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 168 WYRAPEIL 175
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 -TLWYRAPEIL 175
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 -TLWYRAPEIL 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 51
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 108
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 109 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 165
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 166 -TLWYRAPEIL 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 55
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 112
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 113 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 169
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 170 -TLWYRAPEIL 179
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 21 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 186 YNKFSIKSDVWAF 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 167 -TLWYRAPEIL 176
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 129
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 188 YNKFSIKSDVWAF 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 168 -TLWYRAPEIL 177
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 34 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 83
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 140
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 141 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 199 YNKFSIKSDVWAF 211
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 109
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 110 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 167 -TLWYRAPEIL 176
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 23 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 129
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+RD N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 188 YNKFSIKSDVWAF 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 111 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TL 166
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 167 WYRAPEIL 174
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 168 -TLWYRAPEIL 177
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 53
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSY 110
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 111 LFQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 167
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 168 -TLWYRAPEIL 177
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEI 125
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 109
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 110 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 166 LWYRAPEIL 174
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEI 125
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREI 54
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLF 111
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V T
Sbjct: 112 QLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 168 LWYRAPEIL 176
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 18/192 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F VLG+G FG VF RP +G + A+K L + +L+ T
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFL------VRKVTRPDSGHLYAMKVLKKATLKVRDRVRT 77
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+++ L + HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 78 KMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ALG L +LHS +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 137 AELALG----LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS- 189
Query: 241 RVMGTYGYAAPE 252
GT Y APE
Sbjct: 190 -FCGTVEYMAPE 200
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 98/231 (42%), Gaps = 20/231 (8%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + + H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 128
Query: 155 FMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 211
M G L++ L R S L+ + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 212 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
LL AK+ DFG+A+D S M + PE GIF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 131 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 128 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 128 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 133 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 98/231 (42%), Gaps = 20/231 (8%)
Query: 43 PRTEGEILLGSNI------KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYA 95
P TE GSN K+ S + LK R N LG G FG V++G +
Sbjct: 13 PTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 72
Query: 96 PARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYE 154
P + + +AVK L + S Q L++L E + + H N+V+ IG L+ R ++ E
Sbjct: 73 P----SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 128
Query: 155 FMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNI 211
M G L++ L R S L+ + VA A G YL + I+RD N
Sbjct: 129 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNC 186
Query: 212 LLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
LL AK+ DFG+A+D S M + PE GIF
Sbjct: 187 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 152 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+ RL+ E+ + EI
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREIS 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 111
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 112 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 167
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 168 WYRAPEIL 175
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+ RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALXKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+EF+ + + F AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---FMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 167 WYRAPEIL 174
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 121 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 130 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + +L H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 137 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 267 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 316
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 373
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 374 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 431
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 432 YNKFSIKSDVWAF 444
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 18 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 134 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 191
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 27 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 143 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 200
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 62
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV+EFM G L ++L + + + L +G+AYL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 120 --EEASVIHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF Y +++AVK L S ++ E + L L H +
Sbjct: 21 LGEGAFGKVFLA----ECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENH---------LFRRASYIQPLSWTIRMKVALG 186
+VK G C+E D ++V+E+M G L L + L+ + + +A
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
A G+ YL S ++RD T N L+ N K+ DFG+++D + V M
Sbjct: 137 IAAGMVYLASQ--HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 247 GYAAPE 252
+ PE
Sbjct: 195 RWMPPE 200
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G +G V++G +++ + +AVK L +++++ E+L E + ++ HPN
Sbjct: 225 LGGGQYGEVYEGVWKKYS---------LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPN 274
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L+G C + ++ EFM G+L ++L R Q ++ + + +A + + YL
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYL- 331
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+K I+R+ N L+ N+ K++DFGL++ TG + APE +A
Sbjct: 332 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 389
Query: 256 TGIFQLVLLLFTF 268
F + ++ F
Sbjct: 390 YNKFSIKSDVWAF 402
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIK 126
NF+ +GEG +G V+K TG V+A+K RL+ E+ + EI
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIREIS 53
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
L +L HPN+VKL+ ++ LV+E + + + F AS + + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ G T + T
Sbjct: 111 LLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTL 166
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 167 WYRAPEIL 174
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQLYHP 134
LGEG +G V+K E TG ++A+K++ ES LQ E + EI + Q P
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSP 84
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VK G ++ +V E+ GS+ + + R + ++ L KGL YL
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL---KGLEYL 141
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
H + I+RD K NILL+ +AKL+DFG+A G V+GT + APE +
Sbjct: 142 HF--MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVI 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + S+ +++ E + + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-----------VAIKTIKEGSMSED-DFIEEAEVMMKLSHP 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV+EFM G L ++L + + + L +G+AYL
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 139
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 140 --EEACVIHRDLAARNCLVGENQVIKVSDFGMTR 171
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ +LGEG FG V++G H G + +AVK ++ +L ++++E + L
Sbjct: 29 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGL 191
HP++VKLIG +E++ ++ E P G L ++L R + ++ L+ + +L K +
Sbjct: 83 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 138
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AYL S ++RD NIL+ KL DFGL++
Sbjct: 139 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 68 RNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
R+ P+ V LG+G FG V+K E TG + A K + +S + ++
Sbjct: 5 RDLDPNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDY 55
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM 181
+ EI+ L HP +VKL+G D ++ EF P G+++ + + +
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ L A L +LHS ++I+RD K N+L+ L + +L+DFG++ Q S
Sbjct: 116 RQMLEA---LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-- 168
Query: 242 VMGTYGYAAPEYM 254
+GT + APE +
Sbjct: 169 FIGTPYWMAPEVV 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGLA+ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 68 RNFRPDSV------LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
R+ P+ V LG+G FG V+K E TG + A K + +S + ++
Sbjct: 13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDY 63
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM 181
+ EI+ L HP +VKL+G D ++ EF P G+++ + + +
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ L A L +LHS ++I+RD K N+L+ L + +L+DFG++ Q S
Sbjct: 124 RQMLEA---LNFLHS--KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-- 176
Query: 242 VMGTYGYAAPEYM 254
+GT + APE +
Sbjct: 177 FIGTPYWMAPEVV 189
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 72
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 64
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 214
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 72
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 123
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
A+G+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 124 ----AEGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
+GEG FG VF+ P P T ++AVK L +E S ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI--------------------QP 174
N+VKL+G C L++E+M G L L + + P
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 175 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
LS ++ +A A G+AYL + K ++RD T N L+ N K++DFGL+++
Sbjct: 171 LSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 89
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ +LGEG FG V++G H G + +AVK ++ +L ++++E + L
Sbjct: 17 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGL 191
HP++VKLIG +E++ ++ E P G L ++L R + ++ L+ + +L K +
Sbjct: 71 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 126
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AYL S ++RD NIL+ KL DFGL++
Sbjct: 127 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ +LGEG FG V++G H G + +AVK ++ +L ++++E + L
Sbjct: 13 NRILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGL 191
HP++VKLIG +E++ ++ E P G L ++L R + ++ L+ + +L K +
Sbjct: 67 DHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL---YSLQICKAM 122
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AYL S ++RD NIL+ KL DFGL++
Sbjct: 123 AYLES--INCVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + + +P + M++AVK L +L ++ E + L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA----SYI----QP------LSWTIRM 181
+VK G C + D ++V+E+M G L F RA + I QP L + +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNK--FLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+A A G+ YL S ++RD T N L+ N K+ DFG+++D + V
Sbjct: 137 HIASQIASGMVYLASQ--HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 242 VMGTYGYAAPE 252
M + PE
Sbjct: 195 TMLPIRWMPPE 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 55 IKSFSFNGLKTATRNF---------RPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVI 105
I F+F A R F + + V+G G FG V G H P + + +
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG----HLKLPGK--REIFV 64
Query: 106 AVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
A+K L + + ++L+E +GQ HPN++ L G + +++ EFM GSL++
Sbjct: 65 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 165 LFRRASYIQPLSWTIRMKVAL--GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
L + +T+ V + G A G+ YL ++RD NIL++ N K+S
Sbjct: 125 LRQNDG-----QFTVIQLVGMLRGIAAGMKYLAD--MNYVHRDLAARNILVNSNLVCKVS 177
Query: 223 DFGLAK 228
DFGL++
Sbjct: 178 DFGLSR 183
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + +E +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV+EFM G L ++L + + + L +G+AYL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 119
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 120 --EEACVIHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 60
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV+EFM G L ++L + + + L +G+AYL
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 117
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 118 --EEACVIHRDLAARNCLVGENQVIKVSDFGMTR 149
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 79
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE--IKHLGQL 131
V G FGCV+K + +AVK +Q W E + L +
Sbjct: 30 EVKARGRFGCVWKAQL-----------LNEYVAVKIF---PIQDKQSWQNEYEVYSLPGM 75
Query: 132 YHPNLVKLIGYCLE----DDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGA 187
H N+++ IG D L+ F KGSL + F +A+ + SW +A
Sbjct: 76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANVV---SWNELCHIAETM 130
Query: 188 AKGLAYLHSD--------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
A+GLAYLH D K + +RD K+ N+LL N A ++DFGLA G + +
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 240 TRVMGTYGYAAPEYMATGI-FQ 260
+GT Y APE + I FQ
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQ 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + + ++ +++ E + + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-----------VAIKTIREGAMSEE-DFIEEAEVMMKLSHP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV+EFM G L ++L + + + L +G+AYL
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 122
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 123 --EEACVIHRDLAARNCLVGENQVIKVSDFGMTR 154
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ-----------PLSWTIRMKVA 184
+V+ G C E L+V+E+M G L L + PL + VA
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 136 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 245 TYGYAAPE 252
+ PE
Sbjct: 194 PIRWMPPE 201
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ-----------PLSWTIRMKVA 184
+V+ G C E L+V+E+M G L L + PL + VA
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 142 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 245 TYGYAAPE 252
+ PE
Sbjct: 200 PIRWMPPE 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 99
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 218 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 249
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 34 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 88
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 145
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 146 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 201
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 202 IRWTSPEAIA 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 73
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D S M + PE GIF
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LGEG FG VF + H P + M++AVK L + S ++ E + L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ-----------PLSWTIRMKVA 184
+V+ G C E L+V+E+M G L L + PL + VA
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
A G+ YL ++RD T N L+ K+ DFG+++D + V R M
Sbjct: 165 SQVAAGMVYLAG--LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 245 TYGYAAPE 252
+ PE
Sbjct: 223 PIRWMPPE 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD ++RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 71
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 129 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 184
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 185 IRWTSPEAIA 194
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L++ + MP G L +++ I L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 131 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 169
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLT 123
+ NF+ +GEG +G V+K TG V+A+K RL+ E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTAIR 54
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L +L HPN+VKL+ ++ LV+E + + + F AS + + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKK---FMDASALTGIPLPLIKSY 111
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GLA+ HS + V++RD K N+L++ KL+DFGLA+ +++ V
Sbjct: 112 LFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 168
Query: 244 GTYGYAAPEYM 254
T Y APE +
Sbjct: 169 -TLWYRAPEIL 178
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VL G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 129 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 127 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 165
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFG AK
Sbjct: 134 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGRAK 172
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEI 125
+ +F+ S+LGEG +G V T+ P TG ++A+K++ + L L EI
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
K L H N++ + D ++ + ++ L R S Q LS
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYFIY 119
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQS 236
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 237 HVSTRVMGTYGYAAPEYMATGI-FQLVLLLFTFECSLLHFSLQLPM 281
+ T + T Y APE M T + + +++ C L L+ P+
Sbjct: 178 GM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 98
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 155
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 156 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 211
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 212 IRWTSPEAIA 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI------QPLSWT 178
HLGQ H N+V L+G C L++ E+ G L N L R+A +PL
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S V
Sbjct: 153 DLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 239 STRVMGTYGYAAPEYMATGIFQL 261
+ APE + ++ +
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTV 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ V+G G FG V +G AP + + +A+K L + + E+L+E +GQ
Sbjct: 21 EEVIGAGEFGEVCRG----RLKAPGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL--GAAK 189
HPN+++L G +++ EFM G+L++ L + +T+ V + G A
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGIAS 129
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG---TY 246
G+ YL + ++RD NIL++ N K+SDFGL++ S T +G
Sbjct: 130 GMRYLA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 247 GYAAPEYMA 255
+ APE +A
Sbjct: 188 RWTAPEAIA 196
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E+M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL + D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
F+ VLG G FG V+KG WI P + +A+ L + S + + E L E
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKV 183
+ + +P++ +L+G CL +L+ + MP G L +++ I L+W +++
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 160
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG+ YL + ++++RD N+L+ + K++DFGLAK
Sbjct: 161 ----AKGMNYL--EDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLY 132
++GEG +G V K TG ++A+K+ + ++ + EIK L QL
Sbjct: 32 LVGEGSYGMVMKC---------RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN-HLFRRASYIQPLSWTIRMKVALGAAKGL 191
H NLV L+ C + LV+EF+ L++ LF L + + K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGI 137
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 251
+ HS +I+RD K NIL+ + KL DFG A+ + V + T Y AP
Sbjct: 138 GFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAP 193
Query: 252 EYMATGI 258
E + +
Sbjct: 194 ELLVGDV 200
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 239 STRVMGTYGYAAPEYMATGIF 259
+T + APE + ++
Sbjct: 216 TTNGRLPVKWMAPEALFDRVY 236
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEI 125
+ +F+ S+LGEG +G V T+ P TG ++A+K++ + L L EI
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
K L H N++ + D ++ + ++ L R S Q LS
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYFIY 119
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQS 236
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 237 HVSTRVMGTYGYAAPEYMATGI-FQLVLLLFTFECSLLHFSLQLPM 281
+ T + T Y APE M T + + +++ C L L+ P+
Sbjct: 178 GM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 20 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 136 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI------QPLSWT 178
HLGQ H N+V L+G C L++ E+ G L N L R+A +PL
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S V
Sbjct: 161 DLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 239 STRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLH-FSLQL 279
+ APE + ++ + ++++ L FSL L
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 260
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 27 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 143 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 200
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 26 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 24 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 140 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 26 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 33 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 149 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL A ++RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYLSDMGA--VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIK 126
R VLG G FG V+KG WI P + +A+K L + S + + E L E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKV 183
+ + P + +L+G CL +L V + MP G L +H+ R L+W +++
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI-- 128
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
AKG++YL + ++++RD N+L+ + K++DFGLA+
Sbjct: 129 ----AKGMSYL--EDVRLVHRDLAARNVLVKSPNHVKITDFGLAR 167
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 117
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 118 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 176 VPFAWCAPESLKTRTF 191
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIKHLGQLYH 133
+GEG +G V+K A+ G ++A+KR+ ++ + + EI L +L+H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PN+V LI + LV+EFM K L+ L + +Q I + L +G+A+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL---RGVAH 134
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 253
H + ++++RD K N+L++ + KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 135 CH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDV 190
Query: 254 M 254
+
Sbjct: 191 L 191
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 117
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 118 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 176 VPFAWCAPESLKTRTF 191
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 239 STRVMGTYGYAAPEYMATGIF 259
+T + APE + ++
Sbjct: 216 TTNGRLPVKWMAPEALFDRVY 236
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG GG V ++ E T + + R +E+L+ + E+ + QL H N
Sbjct: 19 LGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETLK---RFEREVHNSSQLSHQN 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ---PLSWTIRMKVALGAAKGLA 192
+V +I EDD LV E++ +L + YI+ PLS + G+
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTL-------SEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
+ H ++++RD K NIL+D N K+ DFG+AK S + + V+GT Y +PE
Sbjct: 126 HAHD--MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPE 182
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 55 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 171 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 228
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 229 MSPESLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 121
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 122 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 180 VPFAWCAPESLKTRTF 195
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 127
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 128 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 186 VPFAWCAPESLKTRTF 201
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIKHLGQLYH 133
+GEG +G V+K A+ G ++A+KR+ ++ + + EI L +L+H
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PN+V LI + LV+EFM K L+ L + +Q I + L +G+A+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL---RGVAH 134
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 253
H + ++++RD K N+L++ + KL+DFGLA+ +S+ T + T Y AP+
Sbjct: 135 CH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDV 190
Query: 254 M 254
+
Sbjct: 191 L 191
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 23 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRA----SYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L R A + P S + +++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 139 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 65
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 66 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 121
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P +V
Sbjct: 122 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 180 VPFAWCAPESLKTRTF 195
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 90
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D M + PE GIF
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 240
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 33 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRA----SYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L R A + P S + +++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 149 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 56 KSFSFNGLKTATR-NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE- 113
K+ S + LK R N LG G FG V++G + P + + +AVK L +
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVC 113
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RAS 170
S Q L++L E + + H N+V+ IG L+ R ++ E M G L++ L R S
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLA 227
L+ + VA A G YL + I+RD N LL AK+ DFG+A
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 228 KDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
+D M + PE GIF
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 263
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G P++ + I ++ Q ++L E +
Sbjct: 17 NISIDKVVGAGEFGEVCSG----RLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 71
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E M GSL++ L + + + ++ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 129 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 184
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 185 IRWTSPEAIA 194
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V G W+++ +A+K + +E +++ E + + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-----------VAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L G CLE LV EFM G L ++L + + + L +G+AYL
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYL 120
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++A VI+RD N L+ N K+SDFG+ +
Sbjct: 121 --EEACVIHRDLAARNCLVGENQVIKVSDFGMTR 152
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ V+G G FG V +G AP + + +A+K L + + E+L+E +GQ
Sbjct: 19 EEVIGAGEFGEVCRG----RLKAPGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL--GAAK 189
HPN+++L G +++ EFM G+L++ L + +T+ V + G A
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGIAS 127
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG---TY 246
G+ YL + ++RD NIL++ N K+SDFGL++ S T +G
Sbjct: 128 GMRYLA--EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 247 GYAAPEYMA 255
+ APE +A
Sbjct: 186 RWTAPEAIA 194
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 61
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 62 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 117
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P V
Sbjct: 118 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 176 VPFAWCAPESLKTRTF 191
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 45/241 (18%)
Query: 69 NFRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F P LG GGFG VF K +D+ YA R + + + L +E + + E+K
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKR----IRLPNRELAREKV------MREVK 55
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSL--ENHLFRRASY---------IQPL 175
L +L HP +V+ LE + + PK L + L R+ + I+
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL--AKDGPTG 233
++ + + L A+ + +LHS +++RD K SNI ++ K+ DFGL A D
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 234 SQSHVS--------TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
Q+ ++ T +GT Y +PE + IF L L+LF L FS Q
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL---LYPFSTQ 230
Query: 279 L 279
+
Sbjct: 231 M 231
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTE 124
++ R LG+G FG V +G D AP+ G + +AVK L + L + +++ E
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWD----APS--GKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ + L H NL++L G L ++ V E P GSL + L + + L T+ + A
Sbjct: 72 VNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHF--LLGTLS-RYA 127
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
+ A+G+ YL S + I+RD N+LL K+ DFGL + P V
Sbjct: 128 VQVAEGMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 245 T-YGYAAPEYMATGIF 259
+ + APE + T F
Sbjct: 186 VPFAWCAPESLKTRTF 201
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N D V+G G FG V G + P++ + I ++ Q ++L E +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK----LPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIM 100
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
GQ HPN+++L G + ++V E M GSL++ L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 158 SGMKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--P 213
Query: 246 YGYAAPEYMA 255
+ +PE +A
Sbjct: 214 IRWTSPEAIA 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 204 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 252
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 138 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEIT 223
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 43 PRTEGEILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTG 102
P E L S K+ + A +F LG+G FG V Y +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSK 59
Query: 103 MVIAVK-----RLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMP 157
++A+K +L + ++ L EI+ L HPN+++L GY + L+ E+ P
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
G++ L + + + + + T ++ A L+Y HS +VI+RD K N+LL
Sbjct: 118 LGTVYRELQKLSKFDEQRTATYITEL----ANALSYCHS--KRVIHRDIKPENLLLGSAG 171
Query: 218 NAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
K++DFG + P+ + T + GT Y PE +
Sbjct: 172 ELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG GGFG V + WI + TG +A+K+ QE S + W EI+ + +L HP
Sbjct: 22 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
N+V + +D LL E+ G L +L + + IR ++ +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 131
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGT 245
L YLH + ++I+RD K NI+L K+ D G AK+ Q + T +GT
Sbjct: 132 SALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGELCTEFVGT 186
Query: 246 YGYAAPEYMATGIFQLVLLLFTF 268
Y APE + + + + ++F
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSF 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G P T +A+K +N+ S++ +E+L E + +
Sbjct: 20 LGQGSFGMVYEGVA--KGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL------FRRASYIQPLSWTIRMKVALGAA 188
++V+L+G + L++ E M +G L+++L + P S + +++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL+++K ++RD N + ++ K+ DFG+ +D + + +
Sbjct: 136 DGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 193
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
+PE + G+F +++F L +
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-ESLQGHLEWLTEI 125
+ +F+ S+LGEG +G V T+ P TG ++A+K++ + L L EI
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA-----THKP----TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
K L H N++ + D ++ + ++ L R S Q LS
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-TQMLSDDHIQYFIY 119
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---------DGPTGSQS 236
+ + LH + VI+RD K SN+L++ N + K+ DFGLA+ PTG QS
Sbjct: 120 QTLRAVKVLHG--SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 237 HVSTRVMGTYGYAAPEYMATGI-FQLVLLLFTFECSLLHFSLQLPM 281
+ + T Y APE M T + + +++ C L L+ P+
Sbjct: 178 GM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG GGFG V + WI + TG +A+K+ QE S + W EI+ + +L HP
Sbjct: 23 LGTGGFGYVLR-WIHQ--------DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
N+V + +D LL E+ G L +L + + IR ++ +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 132
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGT 245
L YLH + ++I+RD K NI+L K+ D G AK+ Q + T +GT
Sbjct: 133 SALRYLHEN--RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGELCTEFVGT 187
Query: 246 YGYAAPEYMATGIFQLVLLLFTF 268
Y APE + + + + ++F
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSF 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 27/215 (12%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK 126
N VLG G FG V ++ Y ++ G + +AVK L +++ E L +E+K
Sbjct: 45 ENLEFGKVLGSGAFGKV----MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 127 HLGQL-YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-------------------F 166
+ QL H N+V L+G C L++E+ G L N+L
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 226
+ L++ + A AKG+ +L ++RD N+L+ K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC--VHRDLAARNVLVTHGKVVKICDFGL 218
Query: 227 AKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQL 261
A+D + S V + APE + GI+ +
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 84
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 85 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 145 DLVSCTYQLARGMEYLASQKC--IHRDLTARNVLVTENNVMKIADFGLARD 193
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 89
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 90 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 150 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 198
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 86
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 87 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 147 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 195
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL----TEIKHLG 129
LG G FG V G +H TG +AVK LN++ ++ L+ + EI++L
Sbjct: 22 DTLGVGTFGKVKVG---KHEL------TGHKVAVKILNRQKIRS-LDVVGKIRREIQNLK 71
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
HP+++KL +V E++ G L +++ + + S + ++
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----S 127
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGP-----TGSQSHVSTR 241
G+ Y H + V++RD K N+LLD + NAK++DFGL+ DG GS ++ +
Sbjct: 128 GVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPE 185
Query: 242 VMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
V+ YA PE I+ ++L+ C L F
Sbjct: 186 VISGRLYAGPE---VDIWSSGVILYALLCGTLPFD 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ E+ KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N +++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMRIADFGLARD 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 128 LGQLYHPNLVKLIG--YCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L L+ +VK G Y LV E++P G L + L R + L + + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 121
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V R G
Sbjct: 122 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQ 178
Query: 246 YG--YAAPEYMATGIFQLVLLLFTF 268
+ APE ++ IF +++F
Sbjct: 179 SPIFWYAPESLSDNIFSRQSDVWSF 203
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 128 LGQLYHPNLVKLIG--YCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L L+ +VK G Y LV E++P G L + L R + L + + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 122
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V R G
Sbjct: 123 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQ 179
Query: 246 YG--YAAPEYMATGIFQLVLLLFTF 268
+ APE ++ IF +++F
Sbjct: 180 SPIFWYAPESLSDNIFSRQSDVWSF 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
++ V+G G V + AP + +A+KR+N E Q + E L EI+
Sbjct: 16 DYELQEVIGSGATAVVQAAYC-----APKKEK----VAIKRINLEKCQTSMDELLKEIQA 66
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN---HLFRRASYIQ-PLSWTIRMKV 183
+ Q +HPN+V + D LV + + GS+ + H+ + + L + +
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG---SQSHVST 240
+GL YLH K I+RD K NILL + + +++DFG++ TG +++ V
Sbjct: 127 LREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 241 RVMGTYGYAAPEYM 254
+GT + APE M
Sbjct: 185 TFVGTPCWMAPEVM 198
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 128 LGQLYHPNLVKLIG--YCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L L+ +VK G Y LV E++P G L + L R + L + + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 134
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KG+ YL S + ++RD NIL++ + K++DFGLAK P +V R G
Sbjct: 135 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQ 191
Query: 246 YG--YAAPEYMATGIFQLVLLLFTF 268
+ APE ++ IF +++F
Sbjct: 192 SPIFWYAPESLSDNIFSRQSDVWSF 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P+G + L + + + + + T
Sbjct: 62 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 120 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 169
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 170 TLCGTLDYLPPEMI 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
++ V+G G V + AP + +A+KR+N E Q + E L EI+
Sbjct: 11 DYELQEVIGSGATAVVQAAYC-----APKKEK----VAIKRINLEKCQTSMDELLKEIQA 61
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLEN---HLFRRASYIQ-PLSWTIRMKV 183
+ Q +HPN+V + D LV + + GS+ + H+ + + L + +
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG---SQSHVST 240
+GL YLH K I+RD K NILL + + +++DFG++ TG +++ V
Sbjct: 122 LREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 241 RVMGTYGYAAPEYM 254
+GT + APE M
Sbjct: 180 TFVGTPCWMAPEVM 193
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R+ + S LG+G FG V + Y P TG ++AVK+L ++ EI+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 128 LGQLYHPNLVKLIG--YCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
L L+ +VK G Y LV E++P G L + L R + L + + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSS 118
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KG+ YL S + ++RD NIL++ + K++DFGLAK P V R G
Sbjct: 119 QICKGMEYLGS--RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQ 175
Query: 246 YG--YAAPEYMATGIFQLVLLLFTF 268
+ APE ++ IF +++F
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSF 200
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---------- 174
HLGQ H N+V L+G C L++ E+ G L N L R++ ++
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 175 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 234
LS + + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 235 QSHVSTRVMGTYGYAAPEYMATGIFQL 261
V + APE + ++ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTV 245
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRRAS 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
P M L +GL +LHS +V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVPTETIKDMMFQL--LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR-- 168
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFEC 270
S T V+ T Y APE + + + L++ C
Sbjct: 169 -IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRRAS 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
P M L +GL +LHS +V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVPTETIKDMMFQL--LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR-- 168
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLPM 281
S T V+ T Y APE + + + L++ C + P+
Sbjct: 169 -IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 43 PRTEGEILLGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTG 102
P E L S K+ + A +F LG+G FG V Y +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSK 59
Query: 103 MVIAVK-----RLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMP 157
++A+K +L + ++ L EI+ L HPN+++L GY + L+ E+ P
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
G++ L + + + + + T ++ A L+Y HS +VI+RD K N+LL
Sbjct: 118 LGTVYRELQKLSKFDEQRTATYITEL----ANALSYCHS--KRVIHRDIKPENLLLGSAG 171
Query: 218 NAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
K++DFG + P+ + + GT Y PE +
Sbjct: 172 ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMI 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLTEIKHLGQ 130
LG+G FG V Y + ++A+K +L + ++ L EI+
Sbjct: 20 LGKGKFGNV---------YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ--SH 68
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HPN+++L GY + L+ E+ P G++ L + + + + + T ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NA 124
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
L+Y HS +VI+RD K N+LL N K++DFG + P+ + T + GT Y
Sbjct: 125 LSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLP 178
Query: 251 PEYM 254
PE +
Sbjct: 179 PEMI 182
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCV--FKGWIDEHTYAPARPGTGMVIAVKRL---NQESLQGH 118
K + ++F+ LG G FG V + + YA +V+ +K++ N E L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-- 59
Query: 119 LEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
L + HP ++++ G + ++ +++ G L + L + + P++
Sbjct: 60 ---------LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF 110
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+V L L YLHS +IYRD K NILLD N + K++DFG AK P V
Sbjct: 111 YAAEVCLA----LEYLHS--KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----V 159
Query: 239 STRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ + GT Y APE ++T + + ++F
Sbjct: 160 TYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK--RLNQESLQGHLEWLTEIKHLGQLY 132
+LGEG FG V +G + + GT + +AVK +L+ S + E+L+E +
Sbjct: 41 ILGEGEFGSVMEGNLKQED------GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 133 HPNLVKLIGYCLEDDHR-----LLVYEFMPKGSLENHLF--RRASYIQPLSWTIRMKVAL 185
HPN+++L+G C+E + +++ FM G L +L R + + + +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
A G+ YL + ++RD N +L + ++DFGL+K
Sbjct: 155 DIALGMEYLSN--RNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---- 116
+GL A + + + +GEG +G VFK A G +A+KR+ ++ +
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFK--------ARDLKNGGRFVALKRVRVQTGEEGMP 55
Query: 117 -GHLEWLTEIKHLGQLYHPNLVKLIGYCL-----EDDHRLLVYEFMPKGSLENHLFRRAS 170
+ + ++HL HPN+V+L C + LV+E + + L +L +
Sbjct: 56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPE 114
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
P M L +GL +LHS +V++RD K NIL+ + KL+DFGLA+
Sbjct: 115 PGVPTETIKDMMFQL--LRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLAR-- 168
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLPM 281
S T V+ T Y APE + + + L++ C + P+
Sbjct: 169 -IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 51 LGSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-- 108
L S K+ + A +F LG+G FG V Y + ++A+K
Sbjct: 8 LASKQKNEESKKRQWALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVL 58
Query: 109 ---RLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL 165
+L + ++ L EI+ L HPN+++L GY + L+ E+ P G++ L
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 116
Query: 166 FRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
+ + + + + T ++ A L+Y HS +VI+RD K N+LL K++DFG
Sbjct: 117 QKLSKFDEQRTATYITEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFG 170
Query: 226 LAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ P+ + T + GT Y PE +
Sbjct: 171 WSVHAPSSRR----TTLCGTLDYLPPEMI 195
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 55 IKSFSFNGLKTATRNF---------RPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVI 105
+ F+F A R F + + V+G G FG V G P + + +
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSG----RLKVPGK--REICV 60
Query: 106 AVKRLNQE-SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
A+K L + + ++L+E +GQ HPN++ L G + +++ E+M GSL+
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 165 LFR---RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKL 221
L + R + IQ L +R G G+ YL A ++RD NIL++ N K+
Sbjct: 121 LRKNDGRFTVIQ-LVGMLR-----GIGSGMKYLSDMSA--VHRDLAARNILVNSNLVCKV 172
Query: 222 SDFGLAK---DGPTGSQSHVSTRVMGTYGYAAPEYMA 255
SDFG+++ D P + + ++ + APE +A
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIA 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 140 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEIT 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI------------ 172
HLGQ H N+V L+G C L++ E+ G L N L R+A +
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 173 -------QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
+PL + + A+G+A+L S I+RD N+LL + AK+ DFG
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFG 203
Query: 226 LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQL 261
LA+D S V + APE + ++ +
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F+ ++G GGFG VFK ID TY VI + N E + E+K
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTY---------VIKRVKYNNEKAE------REVK 56
Query: 127 HLGQLYHPNLVKLIG------YCLEDDHR----------LLVYEFMPKGSLENHLFRRAS 170
L +L H N+V G Y E + + EF KG+LE + +R
Sbjct: 57 ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
+ L + +++ KG+ Y+HS K+I RD K SNI L K+ DFGL
Sbjct: 117 --EKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMAT 256
+ R GT Y +PE +++
Sbjct: 173 KNDGK---RXRSKGTLRYMSPEQISS 195
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ + KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
++++ Y + L+ EF P+G L L + + + S T ++ A L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEYM 254
+ KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 184
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMAL----KVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 76
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
++++ Y + L+ EF P+G L L + + + S T ++ A L Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 132
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEYM 254
+ KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 185
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRM----------- 181
N+V L+G C L++ E+ G L N L R R S+I + M
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 182 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 147 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQL 279
+ APE IF V +TFE + + + L
Sbjct: 205 GNARLPVKWMAPE----SIFNCV---YTFESDVWSYGIFL 237
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 115 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 164
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 165 ELCGTLDYLPPEMI 178
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G FG V+ ++ + A V+ +L +E ++ L EI+ L HPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMA----LKVLFKSQLEKEGVEHQLRREIEIQ--SHLRHPN 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
++++ Y + L+ EF P+G L L + + + S T ++ A L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----ADALHYCH 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYAAPEYM 254
+ KVI+RD K N+L+ K++DFG + P+ + R M GT Y PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 184
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS KVI+RD K N+LL K++DFG + P+ ++ +
Sbjct: 115 TEL----ANALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC- 167
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 168 ---GTLDYLPPEMI 178
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ-----GHLEWLTEIKHLGQ 130
LG G FG K I EH TG +AVK LN++ ++ G ++ EI++L
Sbjct: 19 LGVGTFG---KVKIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKL 67
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
HP+++KL +V E++ G L +++ + ++ + + L A
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVD- 125
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGP-----TGSQSHVSTRV 242
Y H + V++RD K N+LLD + NAK++DFGL+ DG GS ++ + V
Sbjct: 126 --YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 243 MGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
+ YA PE I+ ++L+ C L F
Sbjct: 182 ISGRLYAGPE---VDIWSCGVILYALLCGTLPFD 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ-----GHLEWLTEIKHLGQ 130
LG G FG K I EH TG +AVK LN++ ++ G ++ EI++L
Sbjct: 19 LGVGTFG---KVKIGEHQL------TGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKL 67
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
HP+++KL +V E++ G L +++ + ++ + + L A
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVD- 125
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGP-----TGSQSHVSTRV 242
Y H + V++RD K N+LLD + NAK++DFGL+ DG GS ++ + V
Sbjct: 126 --YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 243 MGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFS 276
+ YA PE I+ ++L+ C L F
Sbjct: 182 ISGRLYAGPE---VDIWSCGVILYALLCGTLPFD 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++RD N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
N + ++G G +G V+KG +DE RP +AVK + + Q + I +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQNFIN-EKNIYRV 61
Query: 129 GQLYHPNLVKLI--GYCLEDDHR---LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
+ H N+ + I + D R LLV E+ P GSL +L S W ++
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRL 116
Query: 184 ALGAAKGLAYLHSD-------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA------KDG 230
A +GLAYLH++ K + +RD + N+L+ + +SDFGL+ +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGI 258
G + + + +GT Y APE + +
Sbjct: 177 RPGEEDNAAISEVGTIRYMAPEVLEGAV 204
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 37/204 (18%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQ--L 131
+ G FGCV+K + +AVK LQ W +E + +
Sbjct: 21 EIKARGRFGCVWKAQL-----------MNDFVAVKIF---PLQDKQSWQSEREIFSTPGM 66
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
H NL++ I G LE + L+ F KGSL ++L + + I +W VA
Sbjct: 67 KHENLLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYL--KGNII---TWNELCHVAET 120
Query: 187 AAKGLAYLHSD---------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
++GL+YLH D K + +RDFK+ N+LL + A L+DFGLA G
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 238 VSTRVMGTYGYAAPEYMATGI-FQ 260
+ +GT Y APE + I FQ
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQ 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYH 133
V+G G FG V+KG + + P +A+K L + + +++L E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+++L G + +++ E+M G+L+ L + L ++ G A G+ Y
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYGYAA 250
L + ++RD NIL++ N K+SDFGL++ D P + + ++ + A
Sbjct: 163 LAN--MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTA 218
Query: 251 PEYMATGIFQLVLLLFTF 268
PE ++ F +++F
Sbjct: 219 PEAISYRKFTSASDVWSF 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 103 MVIAVKRLNQESLQGHLEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
M + +RL+ E L+ E H+ + HP+++ LI LV++ M KG
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 161 LENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAK 220
L ++L + + + + +I M+ L A +++LH++ +++RD K NILLD N +
Sbjct: 187 LFDYLTEKVALSEKETRSI-MRSLLEA---VSFLHANN--IVHRDLKPENILLDDNMQIR 240
Query: 221 LSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGI 258
LSDFG + G + + GT GY APE + +
Sbjct: 241 LSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSM 275
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRM----------- 181
N+V L+G C L++ E+ G L N L R R S+I + M
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 182 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 163 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQL 279
+ APE IF V +TFE + + + L
Sbjct: 221 GNARLPVKWMAPE----SIFNCV---YTFESDVWSYGIFL 253
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRM----------- 181
N+V L+G C L++ E+ G L N L R R S+I + M
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 182 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 170 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQL 279
+ APE IF V +TFE + + + L
Sbjct: 228 GNARLPVKWMAPE----SIFNCV---YTFESDVWSYGIFL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 118 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 167
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 168 TLCGTLDYLPPEMI 181
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 62 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 120 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 169
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 170 TLCGTLDYLPPEXI 183
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 76 LGEGGFGCVFKGW---IDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL 131
LGEG FG V ID+ +P + +AVK L ++ + L + ++E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD-----KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 132 -YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR---------- 180
H N++ L+G C +D ++ + KG+L +L R S+ I
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 181 --MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ A+G+ YL S K I+RD N+L+ N K++DFGLA+D
Sbjct: 158 DLVSCTYQLARGMEYLASQKC--IHRDLAARNVLVTENNVMKIADFGLARD 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 62 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 120 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 169
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 170 DLCGTLDYLPPEMI 183
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 115 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 164
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 165 DLCGTLDYLPPEMI 178
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 58 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 116 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 165
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 166 DLCGTLDYLPPEMI 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 115 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 164
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 165 XLCGTLDYLPPEMI 178
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 62 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 120 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 169
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 170 TLCGTLDYLPPEMI 183
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 115 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 164
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 165 DLCGTLDYLPPEMI 178
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 58 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ ++ +S
Sbjct: 116 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS- 168
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 169 ---GTLDYLPPEMI 179
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRM----------- 181
N+V L+G C L++ E+ G L N L R R S+I + M
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 182 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ AKG+A+L S I+RD NILL K+ DFGLA+D S V
Sbjct: 165 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQL 279
+ APE IF V +TFE + + + L
Sbjct: 223 GNARLPVKWMAPE----SIFNCV---YTFESDVWSYGIFL 255
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G FG V G Y G +AVK + ++ +L E + QL H N
Sbjct: 20 IGKGEFGDVMLG-----DY------RGNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSN 66
Query: 136 LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L+G +E+ L +V E+M KGSL ++L R + L +K +L + + YL
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYL 124
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT--YGYAAPE 252
+ ++RD N+L+ + AK+SDFGL K+ ST+ G + APE
Sbjct: 125 EGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPE 175
Query: 253 YMATGIFQLVLLLFTF 268
+ F +++F
Sbjct: 176 ALREAAFSTKSDVWSF 191
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 115 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 164
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 165 TLCGTLDYLPPEMI 178
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P+G + L + + + + + T
Sbjct: 62 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ +
Sbjct: 120 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----X 169
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 170 XLXGTLDYLPPEMI 183
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 10 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 61 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 119 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 168
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 169 TLCGTLDYLPPEMI 182
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEI 125
A +F LG+G FG V+ + + A V+ +L + ++ L EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILAL----KVLFKAQLEKAGVEHQLRREVEI 58
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L HPN+++L GY + L+ E+ P G++ L + + + + + T ++
Sbjct: 59 Q--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL-- 114
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
A L+Y HS +VI+RD K N+LL K++DFG + P+ + T + GT
Sbjct: 115 --ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 166
Query: 246 YGYAAPEYM 254
Y PE +
Sbjct: 167 LDYLPPEMI 175
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI 179
++L+E +GQ HPN+++L G ++V E+M GSL+ L +TI
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTI 150
Query: 180 RMKVAL--GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGS 234
V + G G+ YL SD V +RD N+L+D N K+SDFGL++ D P +
Sbjct: 151 MQLVGMLRGVGAGMRYL-SDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 235 QSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ ++ + APE +A F +++F
Sbjct: 209 XTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQLY 132
+G G FG V Y V+A+K+++ Q + +W + E++ L +L
Sbjct: 62 IGHGSFGAV---------YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN ++ G L + LV E+ GS + L + +PL V GA +GLA
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLA 168
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLHS +I+RD K NILL KL DFG + S + +GT + APE
Sbjct: 169 YLHSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPE 220
Query: 253 YM 254
+
Sbjct: 221 VI 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 118 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 167
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 168 TLCGTLDYLPPEMI 181
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQLY 132
+G G FG V Y V+A+K+++ Q + +W + E++ L +L
Sbjct: 23 IGHGSFGAV---------YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN ++ G L + LV E+ GS + L + +PL V GA +GLA
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLA 129
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLHS +I+RD K NILL KL DFG + S + +GT + APE
Sbjct: 130 YLHSHN--MIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPE 181
Query: 253 YM 254
+
Sbjct: 182 VI 183
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 101 TGMVIAVKRLNQESLQGHLEWL-TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
TG ++A+K +++ +L L + TEI+ L L H ++ +L + +V E+ P G
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 160 SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA 219
L +++ + + + + ++ +AY+HS +RD K N+L D +
Sbjct: 94 ELFDYIISQDRLSEEETRVVFRQIV----SAVAYVHS--QGYAHRDLKPENLLFDEYHKL 147
Query: 220 KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA--------TGIFQLVLLLFTFECS 271
KL DFGL P G++ + G+ YAAPE + ++ + +LL+ C
Sbjct: 148 KLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
Query: 272 LLHFS 276
L F
Sbjct: 207 FLPFD 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 57 SFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ 116
F +G + + +G+G FG V G G +AVK + ++
Sbjct: 182 EFYRSGWALNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA 230
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPL 175
+L E + QL H NLV+L+G +E+ L +V E+M KGSL ++L R + L
Sbjct: 231 Q--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--L 286
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+K +L + + YL + ++RD N+L+ + AK+SDFGL K+ +
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 5 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 56 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + T
Sbjct: 114 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----T 163
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 164 TLCGTLDYLPPEMI 177
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
NFR + +G G F V++ A G+ +A+K++ L + + + EI
Sbjct: 33 NFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKEI 83
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKV 183
L QL HPN++K +ED+ +V E G L + F++ + P + V
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
L +A L ++HS +V++RD K +N+ + KL D GL + S++ + ++
Sbjct: 144 QLCSA--LEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLV 197
Query: 244 GTYGYAAPEYMATGIFQLVLLLFTFECSLLHF-SLQLP 280
GT Y +PE + + +++ C L +LQ P
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 57 SFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ 116
F +G + + +G+G FG V G G +AVK + ++
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA 58
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPL 175
+L E + QL H NLV+L+G +E+ L +V E+M KGSL ++L R + L
Sbjct: 59 Q--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--L 114
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+K +L + + YL + ++RD N+L+ + AK+SDFGL K+ +
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLTEIKHLGQ 130
LG+G FG V Y + ++A+K +L + ++ L EI+
Sbjct: 20 LGKGKFGNV---------YLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ--SH 68
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HPN+++L GY + L+ E+ P G++ L + + + + + T ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----NA 124
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
L+Y HS +VI+RD K N+LL N K++DFG + P+ + + GT Y
Sbjct: 125 LSYCHS--KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLP 178
Query: 251 PEYM 254
PE +
Sbjct: 179 PEMI 182
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G +AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP------------ 174
L Q+ HP+++KL G C +D LL+ E+ GSL L R + + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 175 ---------LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
L+ + A ++G+ YL + K+++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 226 LAKD 229
L++D
Sbjct: 196 LSRD 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G +AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP------------ 174
L Q+ HP+++KL G C +D LL+ E+ GSL L R + + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 175 ---------LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
L+ + A ++G+ YL + K+++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLA--EMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 226 LAKD 229
L++D
Sbjct: 196 LSRD 199
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 195 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 87
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
+ H N++ +GY + +V ++ SL +HL + + + + +A A+
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 143
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ +
Sbjct: 144 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 250 APEYM 254
APE +
Sbjct: 202 APEVI 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 52 GSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
GS+ S + K F VLG+GG+G VF+ + + T A TG + A+K L
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQ--VRKVTGA----NTGKIFAMKVLK 54
Query: 112 QESLQGHLEWLTEIKH----LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLF 166
+ + + + K L ++ HP +V LI Y + +L L+ E++ G L L
Sbjct: 55 KAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 226
R +++ + ++++ L +LH + +IYRD K NI+L+ + KL+DFGL
Sbjct: 114 REGIFMEDTACFYLAEISMA----LGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Query: 227 AKDG-PTGSQSHVSTRVMGTYGYAAPEYM 254
K+ G+ +H GT Y APE +
Sbjct: 168 CKESIHDGTVTHT---FCGTIEYMAPEIL 193
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRRASYI-----------QPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L RR + + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 242 VMGTYGYAAPEYMATGIF 259
+ APE + I+
Sbjct: 212 GRLPVKWMAPEALFDRIY 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 18/158 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G FG V G G +AVK + ++ +L E + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSN 60
Query: 136 LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LV+L+G +E+ L +V E+M KGSL ++L R + L +K +L + + YL
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYL 118
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+ ++RD N+L+ + AK+SDFGL K+ +
Sbjct: 119 EGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---------- 174
HLGQ H N+V L+G C L++ E+ G L N L R++ ++
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 175 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 234
S + + A+G+A+L S I+RD N+LL + AK+ DFGLA+D S
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 235 QSHVSTRVMGTYGYAAPEYMATGIFQL 261
V + APE + ++ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTV 245
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ + APE
Sbjct: 119 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 253 YM 254
+
Sbjct: 177 VI 178
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI 179
++L+E +GQ HPN+++L G ++V E+M GSL+ L +TI
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTI 150
Query: 180 RMKVAL--GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGS 234
V + G G+ YL SD V +RD N+L+D N K+SDFGL++ D P +
Sbjct: 151 MQLVGMLRGVGAGMRYL-SDLGYV-HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 235 QSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ ++ + APE +A F +++F
Sbjct: 209 YTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 79
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
+ H N++ +GY + +V ++ SL +HL + + + + +A A+
Sbjct: 80 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQ 135
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ +
Sbjct: 136 GMDYLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 250 APEYM 254
APE +
Sbjct: 194 APEVI 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 55/220 (25%)
Query: 69 NFRPDSVLGEGGFGCVFKG--WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F+ ++G GGFG VFK ID TY VI + N E + E+K
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTY---------VIRRVKYNNEKAE------REVK 57
Query: 127 HLGQLYHPNLVKLIGYCLE---------DDHR---------------------LLVYEFM 156
L +L H N+V G C + DD + EF
Sbjct: 58 ALAKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 157 PKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 216
KG+LE + +R + L + +++ KG+ Y+HS K+I+RD K SNI L
Sbjct: 117 DKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDT 172
Query: 217 YNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMAT 256
K+ DFGL + TR GT Y +PE +++
Sbjct: 173 KQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISS 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLED---DHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI L +L HPN+VKL+ L+D DH +V+E + +G + ++PLS
Sbjct: 86 EIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPV-----MEVPTLKPLSEDQA 139
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
KG+ YLH K+I+RD K SN+L+ + + K++DFG++ + GS + +S
Sbjct: 140 RFYFQDLIKGIEYLHY--QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSN 196
Query: 241 RVMGTYGYAAPEYMA 255
V GT + APE ++
Sbjct: 197 TV-GTPAFMAPESLS 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 147 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 52 GSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
GS+ S + K F VLG+GG+G VF+ + + T A TG + A+K L
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQ--VRKVTGA----NTGKIFAMKVLK 54
Query: 112 QESLQGHLEWLTEIKH----LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLF 166
+ + + + K L ++ HP +V LI Y + +L L+ E++ G L L
Sbjct: 55 KAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLE 113
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 226
R +++ + ++++ L +LH + +IYRD K NI+L+ + KL+DFGL
Sbjct: 114 REGIFMEDTACFYLAEISMA----LGHLH--QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Query: 227 AKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
K+ + V+ GT Y APE +
Sbjct: 168 CKE--SIHDGTVTHXFCGTIEYMAPEIL 193
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 146 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 85
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ K G L+D ++ E++ GS + L PL T + KGL YL
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYL 140
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE +
Sbjct: 141 HSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEVI 196
Query: 255 ATGIF 259
+
Sbjct: 197 KQSAY 201
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 62 GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE- 120
G + F +LG+G FG V TG A+K L +E + E
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEV 52
Query: 121 --WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSW 177
LTE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 53 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 111
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
++ L YLHS+K V+YRD K N++LD + + K++DFGL K+G +
Sbjct: 112 FYGAEIV----SALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 165
Query: 238 VSTRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 166 -MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +E+L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGA 187
L ++ HPN+V L H L+ + + G L + + + Y + + + +V L A
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV-LDA 128
Query: 188 AKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
K YLH +++RD K N+L LD + +SDFGL+K GS V + G
Sbjct: 129 VK---YLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACG 180
Query: 245 TYGYAAPEYMA 255
T GY APE +A
Sbjct: 181 TPGYVAPEVLA 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------IQPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L R SY + LS +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 143 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 10 DFEKISELGAGNGGVVFKV-----SHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 58
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 114
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 115 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDEMANEFVGT 169
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL----QLPMCVLYL 286
Y +PE + + + +++ SL+ ++ + PM + L
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEW-LTEIKHLGQL 131
VLG+G FG V R GT + A+K L ++ + +E + E + L L
Sbjct: 26 VLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
P + + C + RL V E++ G L H+ + + +P + ++++G
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG---- 132
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM-GTYGYA 249
L +LH K +IYRD K N++LD + K++DFG+ K+ V+TR GT Y
Sbjct: 133 LFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---HMMDGVTTREFCGTPDYI 187
Query: 250 APEYMA 255
APE +A
Sbjct: 188 APEIIA 193
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 75
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
+ H N++ +GY + +V ++ SL +HL + + + +A A+
Sbjct: 76 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL---IDIARQTAR 131
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ +
Sbjct: 132 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 250 APEYM 254
APE +
Sbjct: 190 APEVI 194
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ K G L+D ++ E++ GS + L PL T + KGL YL
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYL 120
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE +
Sbjct: 121 HSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEVI 176
Query: 255 ATGIF 259
+
Sbjct: 177 KQSAY 181
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH--LGQL 131
VLG+G FG VF + + + + AR + A+K L + +L+ T+++ L ++
Sbjct: 30 KVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 132 YHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
HP +VKL Y + + +L L+ +F+ G L L + + + ++AL
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA---- 138
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
L +LHS +IYRD K NILLD + KL+DFGL+K+ + S GT Y A
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 251 PE 252
PE
Sbjct: 195 PE 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K F VLG+G FG VF + + + + AR + A+K L + +L+ T
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRT 73
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+++ L ++ HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 74 KMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++AL L +LHS +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 133 AELALA----LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 241 RVMGTYGYAAPE 252
GT Y APE
Sbjct: 186 -FCGTVEYMAPE 196
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ ++ +
Sbjct: 118 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC- 170
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 171 ---GTLDYLPPEMI 181
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V E++ GSL + + ++ R + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
S++ VI+RD K+ NILL ++ + KL+DFG T QS ST V GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVV 188
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K F VLG+G FG VF + + + + AR + A+K L + +L+ T
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDAR----QLYAMKVLKKATLKVRDRVRT 74
Query: 124 EIKH--LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+++ L ++ HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 75 KMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++AL L +LHS +IYRD K NILLD + KL+DFGL+K+ + S
Sbjct: 134 AELALA----LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 186
Query: 241 RVMGTYGYAAPE 252
GT Y APE
Sbjct: 187 -FCGTVEYMAPE 197
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRRASYI-----------QPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L RR + + LS +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 154 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 29 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 77
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 78 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 134 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 189
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 190 INYGTFTIKSDVWSF 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +E+L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGA 187
L ++ HPN+V L H L+ + + G L + + + Y + + + +V L A
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV-LDA 128
Query: 188 AKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
K YLH +++RD K N+L LD + +SDFGL+K GS V + G
Sbjct: 129 VK---YLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACG 180
Query: 245 TYGYAAPEYMA 255
T GY APE +A
Sbjct: 181 TPGYVAPEVLA 191
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++R+ N ++ ++ K+ DFG+ +D + + +
Sbjct: 142 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEIT 227
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ ++ +
Sbjct: 115 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC- 167
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 168 ---GTLDYLPPEMI 178
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIKHLGQL-YH 133
LGEG FG V + +P +AVK L ++ + L + ++E++ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL-FRRASYI-----------QPLSWTIRM 181
N++ L+G C +D ++ E+ KG+L +L RR + + LS +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A A+G+ YL S K I+RD N+L+ + K++DFGLA+D
Sbjct: 139 SCAYQVARGMEYLAS--KKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIKHLGQ 130
+LG+G FG V TG A+K L +E + E LTE + L
Sbjct: 154 KLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 205 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 259
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
L YLHS+K V+YRD K N++LD + + K++DFGL K+G + + GT Y
Sbjct: 260 ALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYL 316
Query: 250 APEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
APE + A + L ++++ C L F Q
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQLYHP 134
LG+G FG V++G + A +AVK +N+ SL+ +E+L E +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE----TRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ------PLSWTIRMKVALGAA 188
++V+L+G + L+V E M G L+++L + P + +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
G+AYL++ K ++R+ N ++ ++ K+ DFG+ +D + + +
Sbjct: 141 DGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 249 AAPEYMATGIFQLVLLLFTFECSLLHFS 276
APE + G+F +++F L +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +E+L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGA 187
L ++ HPN+V L H L+ + + G L + + + Y + + + +V L A
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV-LDA 128
Query: 188 AKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
K YLH +++RD K N+L LD + +SDFGL+K GS V + G
Sbjct: 129 VK---YLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACG 180
Query: 245 TYGYAAPEYMA 255
T GY APE +A
Sbjct: 181 TPGYVAPEVLA 191
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIKHLGQ 130
+LG+G FG V TG A+K L +E + E LTE + L
Sbjct: 157 KLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 208 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 262
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
L YLHS+K V+YRD K N++LD + + K++DFGL K+G + + GT Y
Sbjct: 263 ALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYL 319
Query: 250 APEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
APE + A + L ++++ C L F Q
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 355
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 30 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 79 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 134
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 135 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 190
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 191 INYGTFTIKSDVWSF 205
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 50/248 (20%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL- 122
+T R +G+G FG V++G G +AVK + + W
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFR 70
Query: 123 -TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
EI L H N++ I +D+ LV ++ GSL ++L R ++ +
Sbjct: 71 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-- 128
Query: 178 TIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KD 229
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 129 ---IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 230 GPTGSQSHVSTRVMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL-- 272
T + +GT Y APE + I LV CS+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 245
Query: 273 LHFSLQLP 280
+H QLP
Sbjct: 246 IHEDYQLP 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 23/164 (14%)
Query: 73 DSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQ 130
D V+G+G FG V+ G +ID+ + A+K L++ + +E +L E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQ-------NRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 131 LYHPNLVKLIGYCLEDD---HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG- 186
L HPN++ LIG L + H LL Y M G L F R+ P T++ ++ G
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FIRSPQRNP---TVKDLISFGL 131
Query: 187 -AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
A+G+ YL + K ++RD N +LD ++ K++DFGLA+D
Sbjct: 132 QVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 132 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 187
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 188 INYGTFTIKSDVWSF 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-IKH 127
R VLG G FG V KG + P + + +K + +S + + +T+ +
Sbjct: 14 ELRKLKVLGSGVFGTVHKG-----VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKVA 184
+G L H ++V+L+G C +L V +++P GSL +H+ + + P L+W +++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 124
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
AKG+ YL ++ +++R+ N+LL +++DFG+A
Sbjct: 125 ---AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + +
Sbjct: 118 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC- 170
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 171 ---GTLDYLPPEMI 181
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G H P + + +A+K L + + ++L+E +GQ
Sbjct: 12 EQVIGAGEFGEVCSG----HLKLPGK--REIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL--GAAK 189
HPN++ L G + +++ EFM GSL++ L + +T+ V + G A
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-----QFTVIQLVGMLRGIAA 120
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+ YL ++R NIL++ N K+SDFGL++
Sbjct: 121 GMKYLAD--MNYVHRALAARNILVNSNLVCKVSDFGLSR 157
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 100/249 (40%), Gaps = 52/249 (20%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R +G+G FG V++G W G +AVK + + W
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKW------------RGEEVAVKIFSSREERS---WF 82
Query: 123 --TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLS 176
EI L H N++ I +D+ LV ++ GSL ++L R ++ +
Sbjct: 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM- 141
Query: 177 WTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--K 228
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA
Sbjct: 142 ----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
Query: 229 DGPTGSQSHVSTRVMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL- 272
D T + +GT Y APE + I LV CS+
Sbjct: 198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257
Query: 273 -LHFSLQLP 280
+H QLP
Sbjct: 258 GIHEDYQLP 266
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY +V ++ SL +HL + + + +A A+G+
Sbjct: 79 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL---IDIARQTARGMD 134
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA + S SH ++ G+ + APE
Sbjct: 135 YLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 253 YM 254
+
Sbjct: 193 VI 194
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 23 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 71
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 72 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 127
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 128 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 183
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 184 INYGTFTIKSDVWSF 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-IKH 127
R VLG G FG V KG + P + + +K + +S + + +T+ +
Sbjct: 32 ELRKLKVLGSGVFGTVHKG-----VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 86
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP---LSWTIRMKVA 184
+G L H ++V+L+G C +L V +++P GSL +H+ + + P L+W +++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI--- 142
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
AKG+ YL ++ +++R+ N+LL +++DFG+A
Sbjct: 143 ---AKGMYYL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 59 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + +
Sbjct: 117 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 169
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 170 ---GTLDYLPPEMI 180
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 182 INYGTFTIKSDVWSF 196
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 16 NYRLQKTIGKGNFAKV---KLARHVL------TGREVAVKIIDKTQLNPTSLQ---KLFR 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 113
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 114 KEARAKFRQIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD 171
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 172 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 59 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K+++FG + P+ + T
Sbjct: 117 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----T 166
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 167 TLCGTLDYLPPEMI 180
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 58 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ +
Sbjct: 116 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD---- 165
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 166 TLCGTLDYLPPEMI 179
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ K G L+D ++ E++ GS + L PL T + KGL YL
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYL 120
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS+K I+RD K +N+LL + KL+DFG+A G +GT + APE +
Sbjct: 121 HSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 255 ATGIF 259
+
Sbjct: 177 KQSAY 181
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 16 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 64
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 65 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 120
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 121 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 176
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 177 INYGTFTIKSDVWSF 191
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q P
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ K G L+D ++ E++ GS + L PL T + KGL YL
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYL 135
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS+K I+RD K +N+LL + KL+DFG+A G +GT + APE +
Sbjct: 136 HSEKK--IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 255 ATGIFQLVLLLFTFECSLL--------HFSLQLPMCVLYL 286
+ +++ + + H L PM VL+L
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELH-PMKVLFL 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +AVK + + S+ E+ E + + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMIKEGSMSED-EFFQEAQTMMKLSHP 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
LVK G C ++ +V E++ G L N+L ++P + +++ +G+A+L
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFL 120
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + I+RD N L+D + K+SDFG+ +
Sbjct: 121 ESH--QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + +
Sbjct: 118 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 170
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 171 ---GTLDYLPPEMI 181
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 181
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 182 INYGTFTIKSDVWSF 196
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIKHLGQ 130
+LG+G FG V TG A+K L +E + E LTE + L
Sbjct: 16 KLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 67 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 121
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
L YLHS+K V+YRD K N++LD + + K++DFGL K+G + GT Y
Sbjct: 122 ALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYL 178
Query: 250 APEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
APE + A + L ++++ C L F Q
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 57 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K++DFG + P+ + +
Sbjct: 115 TEL----ANALSYCHS--KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC- 167
Query: 241 RVMGTYGYAAPEYM 254
GT Y PE +
Sbjct: 168 ---GTLDYLPPEMI 178
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 31 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 80 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 135
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 136 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 191
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 192 INYGTFTIKSDVWSF 206
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 22 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 70
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 71 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 126
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 127 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEXTAREGAKFPIKWTAPEA 182
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 183 INYGTFTIKSDVWSF 197
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTEIKHLGQ 130
+LG+G FG V TG A+K L +E + E LTE + L
Sbjct: 15 KLLGKGTFGKVI---------LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 131 LYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
HP L L Y + RL V E+ G L HL R + + + ++
Sbjct: 66 SRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV----S 120
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
L YLHS+K V+YRD K N++LD + + K++DFGL K+G + GT Y
Sbjct: 121 ALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYL 177
Query: 250 APEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
APE + A + L ++++ C L F Q
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 62 GLKTATR----NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL-- 115
G+ ++ R NF VLG+G FG V + E TG + AVK L ++ +
Sbjct: 13 GVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQ 63
Query: 116 QGHLEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
+E K + L HP L +L D V EF+ G L H+ + + +
Sbjct: 64 DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE 123
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG 233
+ ++ L +LH DK +IYRD K N+LLD + KL+DFG+ K+G
Sbjct: 124 ARARFYAAEII----SALMFLH-DKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177
Query: 234 SQSHVSTRVMGTYGYAAPEYMATGIF 259
+ + GT Y APE + ++
Sbjct: 178 GVT--TATFCGTPDYIAPEILQEMLY 201
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 26 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 74
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 75 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 130
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 131 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 186
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 187 INYGTFTIKSDVWSF 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
LGE FG V+KG H + PA +A+K L ++ +G L E+ E +L H
Sbjct: 34 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 88
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA---------------SYIQPLSWT 178
PN+V L+G +D +++ + G L L R+ S ++P +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 147
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + A G+ YL S V+++D T N+L+ N K+SD GL ++ +
Sbjct: 148 --VHLVAQIAAGMEYLSSH--HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 239 STRVMGTYGYAAPEYMATGIFQL 261
+ + APE + G F +
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSI 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 132 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 187
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 188 INYGTFTIKSDVWSF 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 69 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 117
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 173
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 174 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 228
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 260
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 50/247 (20%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK + + W
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFRE 46
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
EI L H N++ I +D+ LV ++ GSL ++L R ++ +
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 103
Query: 179 IRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KDG 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 104 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 161
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL--L 273
T + +GT Y APE + I LV CS+ +
Sbjct: 162 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 221
Query: 274 HFSLQLP 280
H QLP
Sbjct: 222 HEDYQLP 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLE 120
A +F LG+G FG V Y + ++A+K +L + ++ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNV---------YLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
EI+ L HPN+++L GY + L+ E+ P G++ L + + + + + T
Sbjct: 60 REVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ A L+Y HS +VI+RD K N+LL K+++FG + P+ + T
Sbjct: 118 TEL----ANALSYCHSK--RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----T 167
Query: 241 RVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 168 TLCGTLDYLPPEMI 181
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQLYH 133
LGE FG V+KG H + PA +A+K L ++ +G L E+ E +L H
Sbjct: 17 LGEDRFGKVYKG----HLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH 71
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA---------------SYIQPLSWT 178
PN+V L+G +D +++ + G L L R+ S ++P +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF- 130
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + A G+ YL S V+++D T N+L+ N K+SD GL ++ +
Sbjct: 131 --VHLVAQIAAGMEYLSSH--HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 239 STRVMGTYGYAAPEYMATGIFQL 261
+ + APE + G F +
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSI 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 50/247 (20%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK + + W
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFRE 51
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
EI L H N++ I +D+ LV ++ GSL ++L R ++ +
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 108
Query: 179 IRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KDG 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 109 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 166
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL--L 273
T + +GT Y APE + I LV CS+ +
Sbjct: 167 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 226
Query: 274 HFSLQLP 280
H QLP
Sbjct: 227 HEDYQLP 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIK- 126
N + LG G FG V ++ + + + +AVK L + E L +E+K
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 127 --HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRA------SY------I 172
HLGQ H N+V L+G C L++ E+ G L N L R+ SY
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 173 QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+ LS + + A+G+A+L S I+RD N+LL + AK+ DFGLA+D
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNC--IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 233 GSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLH-FSLQL 279
S V + APE + ++ + ++++ L FSL L
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 181
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 182 INYGTFTIKSDVWSF 196
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 73 DSVLGE----GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIK 126
D VLGE G FG VF G + ++AVK +E+L L+ +L E +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSC-RETLPPDLKAKFLQEAR 164
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL- 185
L Q HPN+V+LIG C + +V E + G ++++ +R+K L
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF-------LTFLRTEGARLRVKTLLQ 217
Query: 186 ---GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
AA G+ YL S I+RD N L+ K+SDFG++++ G +
Sbjct: 218 MVGDAAAGMEYLESKCC--IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
Query: 243 MGTYGYAAPEYMATGIF 259
+ APE + G +
Sbjct: 276 QVPVKWTAPEALNYGRY 292
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 123
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 124 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 253 YM 254
+
Sbjct: 182 VI 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 68 RNFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVD 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
++ + HPN+++L + LV++ M KG L ++L + + LS K+
Sbjct: 63 ILRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKI 116
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 117 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVC 171
Query: 244 GTYGYAAPEYMATGI 258
GT Y APE + +
Sbjct: 172 GTPSYLAPEIIECSM 186
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG V+KG ID HT V+A+K ++ +E+ + EI L Q P
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE--------VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ + G L+ ++ E++ GS + L PL T + KGL YL
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYL 132
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS++ I+RD K +N+LL + KL+DFG+A G +GT + APE +
Sbjct: 133 HSERK--IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 255 ATGIFQLVLLLFTFECSLLHF-------SLQLPMCVLYL 286
+ +++ + + S PM VL+L
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 98/247 (39%), Gaps = 50/247 (20%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-- 122
T R +G+G FG V++G G +AVK S + W
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIF---SSREERSWFRE 48
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
EI L H N++ I +D+ LV ++ GSL ++L R ++ +
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 105
Query: 179 IRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KDG 230
+K+AL A GLA+LH + K + +RD K+ NIL+ N ++D GLA D
Sbjct: 106 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 163
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL--L 273
T + +GT Y APE + I LV CS+ +
Sbjct: 164 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 223
Query: 274 HFSLQLP 280
H QLP
Sbjct: 224 HEDYQLP 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 111
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 166
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-EWLTEIK 126
+N LGEG FG V K + R G +AVK L + + L + L+E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA---TAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP------------ 174
L Q+ HP+++KL G C +D LL+ E+ GSL L R + + P
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSS 137
Query: 175 ---------LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
L+ + A ++G+ YL + +++RD NIL+ K+SDFG
Sbjct: 138 SLDHPDERALTMGDLISFAWQISQGMQYLA--EMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 226 LAKD 229
L++D
Sbjct: 196 LSRD 199
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 63 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 119 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 253 YM 254
+
Sbjct: 177 VI 178
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
+G G FG V+KG W H + ++ V E Q + E+ L + H
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQA---FRNEVAVLRKTRHV 92
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
N++ +GY + D+ +V ++ SL HL + + Q + +A A+G+ YL
Sbjct: 93 NILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYL 148
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
H+ +I+RD K++NI L K+ DFGLA S S + G+ + APE +
Sbjct: 149 HA--KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 56 KSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL 115
K + + + + + + LG G FG V+ ++HT +AVK + S+
Sbjct: 170 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMKPGSM 219
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPL 175
+L E + L H LVKL + + ++ EFM KGSL + L QPL
Sbjct: 220 SVEA-FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
I + A+G+A++ ++ I+RD + +NIL+ + K++DFGLA+ G++
Sbjct: 278 PKLIDFSAQI--AEGMAFI--EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VGAK 330
Query: 236 SHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHF 275
+ + APE + G F + +++F L+
Sbjct: 331 FPIK--------WTAPEAINFGSFTIKSDVWSFGILLMEI 362
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 68 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 123
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 124 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 253 YM 254
+
Sbjct: 182 VI 183
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 65 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 120
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 121 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 253 YM 254
+
Sbjct: 179 VI 180
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 56 KSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL 115
K + + + + + + LG G FG V+ ++HT +AVK + S+
Sbjct: 176 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMKPGSM 225
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPL 175
+L E + L H LVKL + + ++ EFM KGSL + L QPL
Sbjct: 226 SVEA-FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
I + A+G+A++ ++ I+RD + +NIL+ + K++DFGLA+
Sbjct: 284 PKLIDFSAQI--AEGMAFI--EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VIED 336
Query: 236 SHVSTRVMGTY--GYAAPEYMATGIFQLVLLLFTFECSLLHF 275
+ + R + + APE + G F + +++F L+
Sbjct: 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 91 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 146
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 147 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 253 YM 254
+
Sbjct: 205 VI 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LT 123
+++ F+ LG G + V+KG TG+ +A+K + +S +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIR 52
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP--LSWTIRM 181
EI + +L H N+V+L ++ LV+EFM L+ ++ R P L +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+GLA+ H +K +++RD K N+L++ KL DFGLA+
Sbjct: 112 YFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G + + +
Sbjct: 111 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY + +V ++ SL +HL + + + + +A A+G+
Sbjct: 90 HVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 145
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 146 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 253 YM 254
+
Sbjct: 204 VI 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 34 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 82
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 138
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 139 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 193
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFKV-----SHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 111
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 166
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 68 RNFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVD 75
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
++ + HPN+++L + LV++ M KG L ++L + + LS K+
Sbjct: 76 ILRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKI 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 130 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVC 184
Query: 244 GTYGYAAPEYMATGI 258
GT Y APE + +
Sbjct: 185 GTPSYLAPEIIECSM 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 55
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQILGKVSI 111
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 112 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 166
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN-----QESLQGHLEWLTEIKHLG 129
+G G FG V+KG W + +AVK LN + LQ + E+ L
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQA---FKNEVGVLR 63
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
+ H N++ +GY + +V ++ SL +HL + + + +A A+
Sbjct: 64 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKL---IDIARQTAR 119
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ +
Sbjct: 120 GMDYLHA--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 250 APEYM 254
APE +
Sbjct: 178 APEVI 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
+ V+G G FG V G + P + + I ++ Q ++L E +GQ
Sbjct: 27 ERVIGAGEFGEVCSGRLK----LPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFD 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL--GAAKG 190
HPN++ L G + ++V E+M GSL+ L + +T+ V + G + G
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG-----QFTVIQLVGMLRGISAG 136
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGTYG 247
+ YL SD V +RD NIL++ N K+SDFGL++ D P + + ++
Sbjct: 137 MKYL-SDMGYV-HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 192
Query: 248 YAAPEYMA 255
+ APE +A
Sbjct: 193 WTAPEAIA 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G VFK ++ P +G+V+A K ++ E +++ + + E+
Sbjct: 26 DFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI--IREL 74
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + ++A I I KV++
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE---QILGKVSI 130
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
KGL YL +K K+++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 131 AVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 185
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y +PE + + + +++ SL+ ++
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 67 TRNFRPDSV-----LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQ 116
TR+F D LG+G FG V Y + ++A+K ++ +E ++
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNV---------YLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS 176
L EI+ L+HPN+++L Y + L+ E+ P+G L L + ++ + +
Sbjct: 68 HQLRREIEIQ--AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT 125
Query: 177 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQS 236
TI ++ A L Y H KVI+RD K N+LL L K++DFG + P+ +
Sbjct: 126 ATIMEEL----ADALMYCHG--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK 179
Query: 237 HVSTRVMGTYGYAAPEYM 254
+ GT Y PE +
Sbjct: 180 ----TMCGTLDYLPPEMI 193
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHL 119
++ +F S LG G G VFK ++ P +G+V+A K ++ E +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI 51
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+ E++ L + P +V G D + E M GSL + + ++A I I
Sbjct: 52 --IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQI 105
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
KV++ KGL YL +K K+++RD K SNIL++ KL DFG++ ++
Sbjct: 106 LGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMA 160
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
+GT Y +PE + + + +++ SL+ ++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 23/218 (10%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHL 119
++ +F S LG G G VFK ++ P +G+V+A K ++ E +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK-----VSHKP----SGLVMARKLIHLEIKPAIRNQI 51
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+ E++ L + P +V G D + E M GSL + + ++A I I
Sbjct: 52 --IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRI---PEQI 105
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
KV++ KGL YL +K K+++RD K SNIL++ KL DFG++ ++
Sbjct: 106 LGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMA 160
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
+GT Y +PE + + + +++ SL+ ++
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 54
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G + + +
Sbjct: 114 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 167
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 168 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 56 KSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL 115
K + + + + + + LG G FG V+ ++HT +AVK + S+
Sbjct: 3 KPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMKPGSM 52
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPL 175
+L E + L H LVKL + + ++ EFM KGSL + L QPL
Sbjct: 53 SVEA-FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 110
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
I + A+G+A++ ++ I+RD + +NIL+ + K++DFGLA+
Sbjct: 111 PKLIDFSAQI--AEGMAFI--EQRNYIHRDLRAANILVSASLVCKIADFGLAR---VIED 163
Query: 236 SHVSTRVMGTY--GYAAPEYMATGIFQLVLLLFTFECSLLHF 275
+ + R + + APE + G F + +++F L+
Sbjct: 164 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G + + +
Sbjct: 111 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 70 FRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTE 124
++ VLG+G FG V K I TG AVK +++ ++ + L E
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
++ L QL HPN++KL + + + LV E G L + + R + + + I +V
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 160
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR 241
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ S
Sbjct: 161 ----SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKD 211
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 212 KIGTAYYIAPEVL 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 70 FRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTE 124
++ VLG+G FG V K I TG AVK +++ ++ + L E
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
++ L QL HPN++KL + + + LV E G L + + R + + + I +V
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 159
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR 241
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ S
Sbjct: 160 ----SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA---SKKMKD 210
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 211 KIGTAYYIAPEVL 223
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 111 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATM 162
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
+ V+G G FG V G + P + + I ++ Q ++L E +GQ
Sbjct: 48 ERVIGAGEFGEVCSGRLK----LPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFD 102
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN+V L G ++V EFM G+L+ L + + ++ G A G+
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMR 159
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL ++RD NIL++ N K+SDFGL++
Sbjct: 160 YLAD--MGYVHRDLAARNILVNSNLVCKVSDFGLSR 193
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 111 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATM 162
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 56
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 57 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 115
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 116 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATM 167
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-- 121
K +F +LG+G FG V TG A+K L +E + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAH 51
Query: 122 -LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+TE + L HP L L Y + RL V E+ G L HL R + + +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
++ L YLHS V+YRD K N++LD + + K++DFGL K+G S
Sbjct: 111 GAEIV----SALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATM 162
Query: 240 TRVMGTYGYAAPEYM-------ATGIFQLVLLLFTFECSLLHFSLQ 278
GT Y APE + A + L ++++ C L F Q
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES-LQGHLEWLTEIKHLGQL-YH 133
LG G FG V ++ Y + M +AVK L + L ++E+K L L H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRM----------- 181
N+V L+G C L++ E+ G L N L R R S+I + M
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 182 --KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ AKG+A+L S I+RD NILL K+ DFGLA+ S V
Sbjct: 170 LLSFSYQVAKGMAFLASKNC--IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQL 279
+ APE IF V +TFE + + + L
Sbjct: 228 GNARLPVKWMAPE----SIFNCV---YTFESDVWSYGIFL 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 73 DSVLGE----GGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIK 126
D VLGE G FG VF G + ++AVK +E+L L+ +L E +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLR---------ADNTLVAVKSC-RETLPPDLKAKFLQEAR 164
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL- 185
L Q HPN+V+LIG C + +V E + G ++++ +R+K L
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF-------LTFLRTEGARLRVKTLLQ 217
Query: 186 ---GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
AA G+ YL S I+RD N L+ K+SDFG++++ G +
Sbjct: 218 MVGDAAAGMEYLESKCC--IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR 275
Query: 243 MGTYGYAAPEYMATGIF 259
+ APE + G +
Sbjct: 276 QVPVKWTAPEALNYGRY 292
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 70 FRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTE 124
++ VLG+G FG V K I TG AVK +++ ++ + L E
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
++ L QL HPN++KL + + + LV E G L + + R + + + I +V
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 136
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR 241
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ +
Sbjct: 137 ----SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK-- 188
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 189 -IGTAYYIAPEVL 200
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 68 RNFRPDSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
N+ P +LG G C+ K E+ G + + + QE + L+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-QELREATLKEVD 75
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
++ + HPN+++L + LV++ M KG L ++L + + LS K+
Sbjct: 76 ILRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKI 129
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+ + LH K +++RD K NILLD + N KL+DFG + G + V
Sbjct: 130 MRALLEVICALH--KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVC 184
Query: 244 GTYGYAAPEYMATGI 258
GT Y APE + +
Sbjct: 185 GTPSYLAPEIIECSM 199
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V E++ GSL + + ++ R + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGL-AKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
S++ VI+RD K+ NILL ++ + KL+DFG A+ P S+ + ++GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVV 188
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
L + + + + Y +L + + M G L HL + + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ LG L ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILG----LEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 243 MGTYGYAAPEYMATGI 258
+GT+GY APE + G+
Sbjct: 351 VGTHGYMAPEVLQKGV 366
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
L + + + + Y +L + + M G L HL + + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ LG L ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILG----LEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 243 MGTYGYAAPEYMATGI 258
+GT+GY APE + G+
Sbjct: 351 VGTHGYMAPEVLQKGV 366
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 29 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V E++ GSL + + ++ R + L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
S++ VI+R+ K+ NILL ++ + KL+DFG T QS ST V GT + APE +
Sbjct: 135 SNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSTMV-GTPYWMAPEVV 189
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 189 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
L + + + + Y +L + + M G L HL + + + +
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 299
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ LG L ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 300 IILG----LEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 349
Query: 243 MGTYGYAAPEYMATGI 258
+GT+GY APE + G+
Sbjct: 350 VGTHGYMAPEVLQKGV 365
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKH 127
+FR VLG G F V T ++A+K + +++L+G + EI
Sbjct: 21 DFR--DVLGTGAFSEVILA---------EDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGA 187
L ++ HPN+V L H L+ + + G L + + + Y + + + +V L A
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV-LDA 128
Query: 188 AKGLAYLHSDKAKVIYRDFKTSNIL---LDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMG 244
K YLH +++RD K N+L LD + +SDFGL+K GS V + G
Sbjct: 129 VK---YLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACG 180
Query: 245 TYGYAAPEYMA 255
T GY APE +A
Sbjct: 181 TPGYVAPEVLA 191
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLY 132
+G G FG V+KG W + +AVK LN + Q + E+ L +
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ +GY +V ++ SL +HL + + + + +A A+G+
Sbjct: 63 HVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMD 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH+ +I+RD K++NI L + K+ DFGLA S SH ++ G+ + APE
Sbjct: 119 YLHA--KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 253 YM 254
+
Sbjct: 177 VI 178
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 112
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 KEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 171 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL---QGHLEWLTEI 125
+F ++G GGFG V Y + TG + A+K L+++ + QG L E
Sbjct: 190 DFSVHRIIGRGGFGEV---------YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 126 KHLGQLYHPN--LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
L + + + + Y +L + + M G L HL + + + +
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ LG L ++H+ V+YRD K +NILLD + + ++SD GLA D + + H S
Sbjct: 301 IILG----LEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHAS--- 350
Query: 243 MGTYGYAAPEYMATGI 258
+GT+GY APE + G+
Sbjct: 351 VGTHGYMAPEVLQKGV 366
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G P + + +A+K L + + ++L+E +GQ
Sbjct: 13 EKVIGVGEFGEVCSG----RLKVPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAA 188
HPN++ L G + +++ E+M GSL+ L + R + IQ L +R G
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLR-----GIG 120
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD + V +RD NIL++ N K+SDFG+++ D P + + ++
Sbjct: 121 SGMKYL-SDMSYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--P 176
Query: 246 YGYAAPEYMA 255
+ APE +A
Sbjct: 177 IRWTAPEAIA 186
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLYH 133
+G+G FG V++G G +AVK + + W EI L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSSREERS---WFREAEIYQTVMLRH 56
Query: 134 PNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
N++ I +D+ LV ++ GSL ++L R ++ + +K+AL A
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTAS 111
Query: 190 GLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLA--KDGPTGSQSHVSTR 241
GLA+LH + K + +RD K+ NIL+ N ++D GLA D T +
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 242 VMGTYGYAAPEYMATGI---------------FQLVLLLFTFECSL--LHFSLQLP 280
+GT Y APE + I LV CS+ +H QLP
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP--------LSWTIRMK 182
+H N+V L+G C + L+V EF G+L +L + + P L+ +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 149 YSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKIXDFGLARD 193
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLEWLTEIKHLGQL 131
+ V+G G FG V G P + + +A+K L + + ++L+E +GQ
Sbjct: 19 EKVIGVGEFGEVCSG----RLKVPGK--REICVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAA 188
HPN++ L G + +++ E+M GSL+ L + R + IQ L +R G
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ-LVGMLR-----GIG 126
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK---DGPTGSQSHVSTRVMGT 245
G+ YL SD + V +RD NIL++ N K+SDFG+++ D P + + ++
Sbjct: 127 SGMKYL-SDMSYV-HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--P 182
Query: 246 YGYAAPEYMA 255
+ APE +A
Sbjct: 183 IRWTAPEAIA 192
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 112
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 KEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 171 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 28 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V E++ GSL + + ++ R + L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
S++ VI+RD K+ NILL ++ + KL+DFG T QS S V GT + APE +
Sbjct: 134 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVV 188
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 24/159 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN---QESLQGHLEWLTEIKHLGQLY 132
LG+G +G V+K ID T G V+AVK++ Q S + EI L +L
Sbjct: 17 LGKGAYGIVWKS-IDRRT--------GEVVAVKKIFDAFQNSTDAQRTF-REIMILTELS 66
Query: 133 -HPNLVKLIGYCLEDDHR--LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
H N+V L+ D+ R LV+++M + H RA+ ++P+ + V K
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH---KQYVVYQLIK 120
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+ YLHS +++RD K SNILL+ + K++DFGL++
Sbjct: 121 VIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+G+G G V Y TG +A++++N + + EI + + +PN
Sbjct: 29 IGQGASGTV---------YTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V E++ GSL + + ++ R + L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
S++ VI+RD K+ NILL ++ + KL+DFG T QS S V GT + APE +
Sbjct: 135 SNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQ-ITPEQSKRSXMV-GTPYWMAPEVV 189
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 69 NFRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLT 123
++ VLG+G FG V K I TG AVK +++ ++ + L
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLR 81
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ L QL HPN++KL + + + LV E G L + + R + + + I +V
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVST 240
G+ Y+H K K+++RD K N+LL+ + N ++ DFGL+ +
Sbjct: 142 L----SGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK- 194
Query: 241 RVMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 195 --IGTAYYIAPEVL 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +A+K +LN SLQ +
Sbjct: 13 NYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPTSLQ---KLFR 60
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + L+ E+ G + ++L RMK
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----------RMKE 110
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
+K + Y H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 111 KEARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 169 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 17 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQGSMSPD-AFLAEANLMKQLQHQR 65
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 66 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 121
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+R+ + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 122 -EERNYIHRNLRAANILVSDTLSCKIADFGLAR---LIEDNEYTAREGAKFPIKWTAPEA 177
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 178 INYGTFTIKSDVWSF 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 23/169 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 90
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP----------LSWTIR 180
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 151 IXYSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 112
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 KEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G YAAPE ++ L ++L+T L F Q
Sbjct: 171 A---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
H E EI L L HPN++KL + + LV EF G L + R + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN---YNAKLSDFGLAKDGPTGS 234
I MK L G+ YLH K +++RD K NILL+ N K+ DFGL+ S
Sbjct: 150 NI-MKQILS---GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFS 200
Query: 235 QSHVSTRVMGTYGYAAPEYM 254
+ + +GT Y APE +
Sbjct: 201 KDYKLRDRLGTAYYIAPEVL 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP--------LSWTIRMK 182
+H N+V L+G C + L+V EF G+L +L + + P L+ +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 149 YSFQVAKGMEFLAS--RKXIHRDLAARNILLSEKNVVKICDFGLARD 193
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +A+K +LN SLQ +
Sbjct: 16 NYRLLKTIGKGNFAKV---KLARHIL------TGREVAIKIIDKTQLNPTSLQ---KLFR 63
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + L+ E+ G + ++L RMK
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----------RMKE 113
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
+K + Y H + ++++RD K N+LLD + N K++DFG + + G +
Sbjct: 114 KEARSKFRQIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G YAAPE ++ L ++L+T L F Q
Sbjct: 172 A---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AV+ +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVRIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 112
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 KEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-- 168
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 169 -LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AV+ +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVRIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L RMK
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----------RMKE 112
Query: 184 ALGAAK------GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
AK + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 113 KEARAKFRQIVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 238 VSTRVMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 171 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 70 FRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE---WLTE 124
++ VLG+G FG V K I TG AVK +++ ++ + L E
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
++ L QL HPN+ KL + + + LV E G L + + R + + + I +V
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 136
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLD---LNYNAKLSDFGLAKDGPTGSQSHVSTR 241
G+ Y H K K+++RD K N+LL+ + N ++ DFGL+ S
Sbjct: 137 ----SGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKD 187
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 188 KIGTAYYIAPEVL 200
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHLGQLYHP 134
LG G FG V ++E + +G+ +K +N++ Q +E + EI+ L L HP
Sbjct: 30 LGSGAFGDVH--LVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 135 NLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N++K+ ED H + +V E G L + + + LS ++ LAY
Sbjct: 81 NIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 194 LHSDKAKVIYRDFKTSNILL-DLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
HS V+++D K NIL D + ++ K+ DFGLA+ S H ST GT Y A
Sbjct: 140 FHSQ--HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEH-STNAAGTALYMA 194
Query: 251 PEYMATGIFQLVLLLFTFECSL 272
PE + TF+C +
Sbjct: 195 PEVFKRDV--------TFKCDI 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL- 122
K NF VLG G +G VF + TG + A+K L + ++ +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFL------VRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103
Query: 123 ---TEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWT 178
TE + L + + + Y + + +L L+ +++ G L HL +R + +
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH---- 159
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+++ +G LA H K +IYRD K NILLD N + L+DFGL+K+ ++
Sbjct: 160 -EVQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETER 216
Query: 239 STRVMGTYGYAAPEYMATG 257
+ GT Y AP+ + G
Sbjct: 217 AYDFCGTIEYMAPDIVRGG 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 37 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 90
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL +C +DD +L + G L ++ + S+ + + ++
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 147
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 148 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 204 QYVSPELL 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 89
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP-----------LSWTI 179
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 150 LICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ APE + ++ + +++F
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G G V+ G+ + HT +AVK L Q S+ +L E + QL H
Sbjct: 21 LGAGQAGEVWMGYYNGHTK----------VAVKSLKQGSMSPDA-FLAEANLMKQLQHQR 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L ++ ++ E+M GSL + L + S I+ L+ + +A A+G+A++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSLVDFL-KTPSGIK-LTINKLLDMAAQIAEGMAFI- 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAPEY 253
++ I+RD + +NIL+ + K++DFGLA+ + + R + + APE
Sbjct: 126 -EERNYIHRDLRAANILVSDTLSCKIADFGLAR---LIEDAEXTAREGAKFPIKWTAPEA 181
Query: 254 MATGIFQLVLLLFTF 268
+ G F + +++F
Sbjct: 182 INYGTFTIKSDVWSF 196
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN-QESLQGHLEWLTEIKHLGQLYHP 134
+G+G FG VFKG ID T V+A+K ++ +E+ + EI L Q
Sbjct: 31 IGKGSFGEVFKG-IDNRTQ--------QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
+ K G L+ ++ E++ GS + L RA +K L KGL YL
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEIL---KGLDYL 136
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
HS+K I+RD K +N+LL + KL+DFG+A T +Q +T V GT + APE +
Sbjct: 137 HSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQ-LTDTQIKRNTFV-GTPFWMAPEVI 192
Query: 255 ATGIFQLVLLLFTFECSLLHF-------SLQLPMCVLYL 286
+ +++ + + S PM VL+L
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 44 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 102
Query: 156 MPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL 215
+ G L H+ R+ + + +++L L YLH + +IYRD K N+LLD
Sbjct: 103 VNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH--ERGIIYRDLKLDNVLLDS 156
Query: 216 NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ KL+D+G+ K+G + ++ GT Y APE +
Sbjct: 157 EGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 193
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 34/223 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 8 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 55
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ + L HPN+VKL + LV E+ G + ++L +++ + +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-WMKEKEARAKFRQ 114
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+ A + Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 115 IVSAVQ---YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FC 166
Query: 244 GTYGYAAPEYMA--------TGIFQLVLLLFTFECSLLHFSLQ 278
G+ YAAPE ++ L ++L+T L F Q
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 209
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 29 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 87
Query: 156 MPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL 215
+ G L H+ R+ + + +++L L YLH + +IYRD K N+LLD
Sbjct: 88 VNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH--ERGIIYRDLKLDNVLLDS 141
Query: 216 NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ KL+D+G+ K+G + ++ GT Y APE +
Sbjct: 142 EGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 178
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG---HLEWLTEIKHLGQLY 132
LGEG FG V T +A+K ++++ L+ H+ EI +L L
Sbjct: 17 LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HP+++KL ++V E+ G L +++ + + ++ +
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IE 122
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
Y H + K+++RD K N+LLD N N K++DFGL+ G+ S G+ YAAPE
Sbjct: 123 YCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177
Query: 253 YM 254
+
Sbjct: 178 VI 179
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A+K + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 33 TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 91
Query: 156 MPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL 215
+ G L H+ R+ + + +++L L YLH + +IYRD K N+LLD
Sbjct: 92 VNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH--ERGIIYRDLKLDNVLLDS 145
Query: 216 NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ KL+D+G+ K+G + ++ GT Y APE +
Sbjct: 146 EGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 182
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 79
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 79
Query: 132 YHPNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 239 STRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
+ APE + ++ + +++F
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 79
Query: 132 YHPNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 79
Query: 132 YHPNLVKLIGYCLEDDHRLLVY-EFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 140 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 188
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 125
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 186 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 149 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 197
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHL 128
F LG G F V TG + AVK + +++L+G + EI L
Sbjct: 24 FEFKETLGTGAFSEVV---------LAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
++ H N+V L +H LV + + G L + + + Y + + T+ +V
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL---- 130
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ YLH + +++RD K N+L D +SDFGL+K G V + GT
Sbjct: 131 DAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 246 YGYAAPEYMA 255
GY APE +A
Sbjct: 186 PGYVAPEVLA 195
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 75 VLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
V+G+G FG V + +E YA V+ K + ++ + H+ + L +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYA------VKVLQKKAILKKKEEKHIMSERNVL-LKNVK 97
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HP LV L D V +++ G L HL R +++P + ++A L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIA----SALG 153
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLHS ++YRD K NILLD + L+DFGL K+ + ++ GT Y APE
Sbjct: 154 YLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEHNSTTSTFCGTPEYLAPE 209
Query: 253 YM 254
+
Sbjct: 210 VL 211
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 53 SNIKSFSFNGLKTATR--NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL 110
+ + F NG + + +F VLG+G FG V R GT + AVK L
Sbjct: 3 NTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVM---------LSERKGTDELYAVKIL 53
Query: 111 NQESL--QGHLEW-LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLF 166
++ + +E + E + L P + + C + RL V E++ G L H+
Sbjct: 54 KKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ 113
Query: 167 RRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 226
+ + +P + ++A+G L +L S +IYRD K N++LD + K++DFG+
Sbjct: 114 QVGRFKEPHAVFYAAEIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Query: 227 AKDGPTGSQSHVSTRVM-GTYGYAAPEYMA 255
K+ V+T+ GT Y APE +A
Sbjct: 168 CKE---NIWDGVTTKXFCGTPDYIAPEIIA 194
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 52 GSNIKSFSFNGLKTATR--NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR 109
+ I F NG + + +F VLG+G FG V R GT + AVK
Sbjct: 323 ANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVM---------LSERKGTDELYAVKI 373
Query: 110 LNQESL--QGHLEW-LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHL 165
L ++ + +E + E + L P + + C + RL V E++ G L H+
Sbjct: 374 LKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 433
Query: 166 FRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
+ + +P + ++A+G L +L S +IYRD K N++LD + K++DFG
Sbjct: 434 QQVGRFKEPHAVFYAAEIAIG----LFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 226 LAKDGPTGSQSHVSTRVM-GTYGYAAPEYMA 255
+ K+ V+T+ GT Y APE +A
Sbjct: 488 MCKE---NIWDGVTTKXFCGTPDYIAPEIIA 515
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 25/171 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 90
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP------------LSWT 178
+H N+V L+G C + L+V EF G+L +L + + P L+
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ + AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 151 HLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 199
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Query: 52 GSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
G + F ++ R VL EGGF V Y G+G A+KRL
Sbjct: 12 GRDQSDFVGQTVELGELRLRVRRVLAEGGFAFV---------YEAQDVGSGREYALKRLL 62
Query: 112 QESLQGHLEWLTEIKHLGQLY-HPNLVKL-----IGYCLED--DHRLLVYEFMPKGSLEN 163
+ + + E+ + +L HPN+V+ IG D L+ + KG L
Sbjct: 63 SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE 122
Query: 164 HLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSD 223
L + S PLS +K+ + + ++H K +I+RD K N+LL KL D
Sbjct: 123 FLKKMESR-GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181
Query: 224 FGLA 227
FG A
Sbjct: 182 FGSA 185
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E+MP G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D K++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE---SLQGHLEWLTEI 125
+F S LG G G V T RP +G+++A K ++ E +++ + + E+
Sbjct: 17 DFERISELGAGNGGVV--------TKVQHRP-SGLIMARKLIHLEIKPAIRNQI--IREL 65
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+ L + P +V G D + E M GSL + + + A I I KV++
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRI---PEEILGKVSI 121
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
+GLAYL +K ++++RD K SNIL++ KL DFG++ ++ +GT
Sbjct: 122 AVLRGLAYLR-EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ----LIDSMANSFVGT 176
Query: 246 YGYAAPEYMATGIFQLVLLLFTFECSLLHFSL 277
Y APE + + + +++ SL+ ++
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAV 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 101 TGMVIAVKRLNQESLQGH--LEWLTEIKHLGQLY--HPNLVKLIGYCLEDDHRLL-VYEF 155
T + A++ + +E + ++W+ KH+ + HP LV L C + + RL V E+
Sbjct: 76 TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS-CFQTESRLFFVIEY 134
Query: 156 MPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL 215
+ G L H+ R+ + + +++L L YLH + +IYRD K N+LLD
Sbjct: 135 VNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH--ERGIIYRDLKLDNVLLDS 188
Query: 216 NYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ KL+D+G+ K+G + ++ GT Y APE +
Sbjct: 189 EGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEIL 225
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLYH 133
LG G FG V+ G+ + T +AVK L S+Q LE E + L H
Sbjct: 20 LGAGQFGEVWMGYYNNSTK----------VAVKTLKPGTMSVQAFLE---EANLMKTLQH 66
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
LV+L +++ ++ EFM KGSL + L L I + A+G+AY
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAY 124
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAP 251
+ ++ I+RD + +N+L+ + K++DFGLA+ + + R + + AP
Sbjct: 125 I--ERKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAP 179
Query: 252 EYMATGIFQLVLLLFTF 268
E + G F + +++F
Sbjct: 180 EAINFGCFTIKSNVWSF 196
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR--LNQESLQGHLEWLTEIKHLGQLYH 133
+GEG +G VFK E T ++A+KR L+ + L EI L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+V+L D LV+EF + L+ + + P I KGL +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGF 116
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
HS V++RD K N+L++ N KL+DFGLA+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E+MP G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D K++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HPN++KL + +V E G L + + +R + + + I +V G
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SG 133
Query: 191 LAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGTY 246
+ Y+H K +++RD K NILL + + + K+ DFGL+ T Q + + +GT
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTA 187
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 188 YYIAPEVL 195
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL Y +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL Y +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHK------ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL Y +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 374 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 428
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L +L + + +V++G +
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 483
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 484 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 517
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 375 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 429
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L +L + + +V++G +
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 484
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 485 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 518
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 49 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASY----IQPLSWTIRMKVALGAA 188
H N++ + D R E M L HL Y Q LS
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYG 247
+GL Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T
Sbjct: 155 RGLKYIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 248 YAAPEYM 254
Y APE M
Sbjct: 213 YRAPEIM 219
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH- 127
F LG G FG V + +H TG A+K L+++ + L EI+H
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVK----LKEIEHT 88
Query: 128 ------LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L + P LVKL + +D+ L +V E+ P G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+++D K++DFGLAK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
VLG G F VF + TG + A+K + + EI L ++ H
Sbjct: 15 EVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+V L H LV + + G L + + R Y + + ++ ++ L A K Y
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDA-SLVIQQVLSAVK---Y 121
Query: 194 LHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
LH + +++RD K N+L + N ++DFGL+K Q+ + + GT GY A
Sbjct: 122 LHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSK----MEQNGIMSTACGTPGYVA 175
Query: 251 PEYMA 255
PE +A
Sbjct: 176 PEVLA 180
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE--WLTEIKHLGQLYH 133
+GEG +G VFK TG ++A+K+ + ++ L EI+ L QL H
Sbjct: 11 IGEGSYGVVFKC---------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PNLV L+ LV+E+ L H R Y + + + + + + +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDR--YQRGVPEHLVKSITWQTLQAVNF 117
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEY 253
H K I+RD K NIL+ + KL DFG A+ TG + V T Y +PE
Sbjct: 118 CH--KHNCIHRDVKPENILITKHSVIKLCDFGFAR-LLTGPSDYYDDEV-ATRWYRSPEL 173
Query: 254 MA 255
+
Sbjct: 174 LV 175
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 86
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L N ++ +++ + +++ + G+
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKDKN---IIELVHQVSMGMK 141
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 142 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 32 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 86
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L N ++ +++ + +++ + G+
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKDKN---IIELVHQVSMGMK 141
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 142 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 64 KTATRN-FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHL 119
+ T+N FR VLG+GGFG V + TG + A K+L ++ ++ G
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEA 229
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLE-DDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
L E K + + + V + Y E D LV M G L+ H++ P +
Sbjct: 230 MALNE-KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + GL LH + +++YRD K NILLD + + ++SD GLA P G +
Sbjct: 289 VFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--I 342
Query: 239 STRVMGTYGYAAPEYM 254
RV GT GY APE +
Sbjct: 343 KGRV-GTVGYMAPEVV 357
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L +L + + +V++G +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MK 125
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 126 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 16 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 70
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L +L ++ +++ + +++ + G+
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKN---IIELVHQVSMGMK 125
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 126 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 30 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L N ++ +++ + +++ + G+
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKDKN---IIELVHQVSMGMK 139
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 140 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 173
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 22 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 76
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L N ++ +++ + +++ + G+
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKDKN---IIELVHQVSMGMK 131
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 132 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 12 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 66
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L +L ++ +++ + +++ + G+
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKN---IIELVHQVSMGMK 121
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAA 250
YL +++ ++RD N+LL + AK+SDFGL+K +++ + G + + A
Sbjct: 122 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYA 178
Query: 251 PE 252
PE
Sbjct: 179 PE 180
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V KG+ + + I N +L+ L L E + QL
Sbjct: 10 DKELGSGNFGTVKKGY---YQMKKVVKTVAVKILKNEANDPALKDEL--LAEANVMQQLD 64
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
+P +V++IG C E + +LV E G L N ++ +++ + +++ + G+
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPL-NKYLQQNRHVKDKN---IIELVHQVSMGMK 119
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL +++ ++RD N+LL + AK+SDFGL+K
Sbjct: 120 YL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSK 153
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 64 KTATRN-FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHL 119
+ T+N FR VLG+GGFG V + TG + A K+L ++ ++ G
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVR---------ATGKMYACKKLEKKRIKKRKGEA 229
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLE-DDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
L E K + + + V + Y E D LV M G L+ H++ P +
Sbjct: 230 MALNE-KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + GL LH + +++YRD K NILLD + + ++SD GLA P G +
Sbjct: 289 VFYAAEICC--GLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--I 342
Query: 239 STRVMGTYGYAAPEYM 254
RV GT GY APE +
Sbjct: 343 KGRV-GTVGYMAPEVV 357
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 31/208 (14%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R +G+G +G V++G W G +AVK + Q
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLW------------HGESVAVKIFSSRDEQSWFR-E 50
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMPKGSLENHLFRRASYIQPLSWT 178
TEI + L H N++ I + + L+ + GSL + L R Q L
Sbjct: 51 TEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPH 105
Query: 179 IRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+ +++A+ AA GLA+LH + K + +RDFK+ N+L+ N ++D GLA
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 233 GSQ--SHVSTRVMGTYGYAAPEYMATGI 258
GS + +GT Y APE + I
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQI 193
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK-----RLNQESLQGHLEWLT 123
N+R +G+G F V + H TG +AVK +LN SLQ +
Sbjct: 15 NYRLLKTIGKGNFAKV---KLARHIL------TGKEVAVKIIDKTQLNSSSLQ---KLFR 62
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
E++ L HPN+VKL + LV E+ G + ++L + + ++
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+ Y H + +++RD K N+LLD + N K++DFG + + G++
Sbjct: 123 V----SAVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FC 173
Query: 244 GTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFSLQ 278
G YAAPE ++ L ++L+T L F Q
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HPN++KL + +V E G L + + +R + + + I +V G
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SG 133
Query: 191 LAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGTY 246
+ Y+H K +++RD K NILL + + + K+ DFGL+ T Q + + +GT
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTA 187
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 188 YYIAPEVL 195
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 29/188 (15%)
Query: 75 VLGEGGFGCVFK--GWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEIKHLGQ 130
+LG+G FG V K I + YA VK +N+ S + L E++ L +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYA-----------VKVINKASAKNKDTSTILREVELLKK 77
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HPN++KL + +V E G L + + +R + + + I +V G
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SG 133
Query: 191 LAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTR-VMGTY 246
+ Y+H K +++RD K NILL + + + K+ DFGL+ T Q + + +GT
Sbjct: 134 ITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS----TCFQQNTKMKDRIGTA 187
Query: 247 GYAAPEYM 254
Y APE +
Sbjct: 188 YYIAPEVL 195
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V ++HT G +AVK+++ Q E+ + +H N
Sbjct: 53 IGEGSTGIVCIA-TEKHT--------GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V + L D +V EF+ G+L + + + ++ V L + L+YLH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLH 158
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 159 NQ--GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ--VSKEVPKRKXLVGTPYWMAPEVIS 214
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++P G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D K++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 55 IKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-- 112
+K+ SF+ + +G G +G V R TG +A+K++
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSA---------RRRLTGQQVAIKKIPNAF 91
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS----------LE 162
+ + L E+K L H N++ + + ++ +P G +E
Sbjct: 92 DVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLME 142
Query: 163 NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
+ L + QPL+ +GL Y+HS A+VI+RD K SN+L++ N K+
Sbjct: 143 SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--AQVIHRDLKPSNLLVNENCELKIG 200
Query: 223 DFGLAKDGPTGSQSH--VSTRVMGTYGYAAPEYM 254
DFG+A+ T H T + T Y APE M
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 55 IKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ-- 112
+K+ SF+ + +G G +G V R TG +A+K++
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSA---------RRRLTGQQVAIKKIPNAF 92
Query: 113 ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS----------LE 162
+ + L E+K L H N++ + + ++ +P G +E
Sbjct: 93 DVVTNAKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLME 143
Query: 163 NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
+ L + QPL+ +GL Y+HS A+VI+RD K SN+L++ N K+
Sbjct: 144 SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--AQVIHRDLKPSNLLVNENCELKIG 201
Query: 223 DFGLAKDGPTGSQSH--VSTRVMGTYGYAAPEYM 254
DFG+A+ T H T + T Y APE M
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 144
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 145 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 198
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 199 APEIILSKGYNKAVDWWALGV 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN--QESLQGHLEWLTEIKHLGQLYH 133
LG G FG V+ G+ + T +AVK L S+Q LE E + L H
Sbjct: 21 LGAGQFGEVWMGYYNNSTK----------VAVKTLKPGTMSVQAFLE---EANLMKTLQH 67
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
LV+L ++ ++ E+M KGSL + L L I + A+G+AY
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAY 125
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GYAAP 251
+ ++ I+RD + +N+L+ + K++DFGLA+ + + R + + AP
Sbjct: 126 I--ERKNYIHRDLRAANVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAP 180
Query: 252 EYMATGIFQLVLLLFTF 268
E + G F + +++F
Sbjct: 181 EAINFGCFTIKSDVWSF 197
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA-FLQEAQVM 316
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + L L + M + A
Sbjct: 317 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--A 373
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 374 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 139 YIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 252 EYM 254
E M
Sbjct: 197 EIM 199
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEI 125
+FR VLG GGFG VF A TG + A K+LN++ L+ G+ + E
Sbjct: 189 DFR---VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFR----RASYIQPLSWTIR 180
K L ++ H + + Y E L LV M G + H++ + +P +
Sbjct: 237 KILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSH 237
++ GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 296 AQIV----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 238 VSTRVMGTYGYAAPEYM 254
GT G+ APE +
Sbjct: 350 A-----GTPGFMAPELL 361
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEI 125
+FR VLG GGFG VF A TG + A K+LN++ L+ G+ + E
Sbjct: 189 DFR---VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFR----RASYIQPLSWTIR 180
K L ++ H + + Y E L LV M G + H++ + +P +
Sbjct: 237 KILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSH 237
++ GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 296 AQIV----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 238 VSTRVMGTYGYAAPEYM 254
GT G+ APE +
Sbjct: 350 A-----GTPGFMAPELL 361
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEI 125
+FR VLG GGFG VF A TG + A K+LN++ L+ G+ + E
Sbjct: 189 DFR---VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFR----RASYIQPLSWTIR 180
K L ++ H + + Y E L LV M G + H++ + +P +
Sbjct: 237 KILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSH 237
++ GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 296 AQIV----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 238 VSTRVMGTYGYAAPEYM 254
GT G+ APE +
Sbjct: 350 A-----GTPGFMAPELL 361
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR--LNQESLQGHLEWLTEIKHLGQLYH 133
+GEG +G VFK E T ++A+KR L+ + L EI L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+V+L D LV+EF + L+ + + P I KGL +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGF 116
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
HS V++RD K N+L++ N KL++FGLA+
Sbjct: 117 CHS--RNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ---GHLEWLTEI 125
+FR VLG GGFG VF A TG + A K+LN++ L+ G+ + E
Sbjct: 189 DFR---VLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFR----RASYIQPLSWTIR 180
K L ++ H + + Y E L LV M G + H++ + +P +
Sbjct: 237 KILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT 295
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA---KDGPTGSQSH 237
++ GL +LH + +IYRD K N+LLD + N ++SD GLA K G T ++ +
Sbjct: 296 AQIV----SGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 238 VSTRVMGTYGYAAPEYM 254
GT G+ APE +
Sbjct: 350 A-----GTPGFMAPELL 361
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH- 127
F LG G FG V + +H TG A+K L+++ + L EI+H
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVK----LKEIEHT 88
Query: 128 ------LGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L + P LVKL + +D+ L +V E+ P G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+++D +++DFGLAK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 139 YIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 252 EYM 254
E M
Sbjct: 197 EIM 199
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES--LQGHLE 120
+K +F +LG+G FG VF + T A+K L ++ + +E
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVE 63
Query: 121 WLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
K + L HP L + ++ V E++ G L H+ ++ + LS
Sbjct: 64 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLS-- 119
Query: 179 IRMKVALGAAK---GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
+ AA+ GL +LHS ++YRD K NILLD + + K++DFG+ K+ G
Sbjct: 120 ---RATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 174
Query: 236 SHVSTRVMGTYGYAAPEYM 254
+ GT Y APE +
Sbjct: 175 K--TNEFCGTPDYIAPEIL 191
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
++ + +L HP VKL + +DD +L + G L ++ + S+ + + +
Sbjct: 59 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 116 IV----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 243 MGTYGYAAPEYM 254
+GT Y +PE +
Sbjct: 170 VGTAQYVSPELL 181
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYL 127
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 128 ES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE 120
+ + + R + LG+G FG V+ G + T +A+K L ++
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA- 49
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+L E + + +L H LV+L + ++ +V E+M KGSL + L L +
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
M A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 109 M--AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 59
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
++ + +L HP VKL + +DD +L + G L ++ + S+ + + +
Sbjct: 60 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 117 IV----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 243 MGTYGYAAPEYM 254
+GT Y +PE +
Sbjct: 171 VGTAQYVSPELL 182
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 139 YIHS--ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 252 EYM 254
E M
Sbjct: 197 EIM 199
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRRASYIQPL 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP- 110
Query: 176 SWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG 233
+ TI+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+
Sbjct: 111 AETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IY 162
Query: 234 SQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFEC 270
S V+ T Y APE + + + +++ C
Sbjct: 163 SYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 31 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 141 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 252 EYM 254
E M
Sbjct: 199 EIM 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VKLIG E+ ++ E G L + L R + S + A + LAYL
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAYL 127
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 128 ES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 139 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 252 EYM 254
E M
Sbjct: 197 EIM 199
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
++ + +L HP VKL + +DD +L + G L ++ + S+ + + +
Sbjct: 62 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 119 IV----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 243 MGTYGYAAPEYM 254
+GT Y +PE +
Sbjct: 173 VGTAQYVSPELL 184
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS-WTIRM 181
TEI L +P++V G+ +DD +V E + SL RR + +P + + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA + +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-- 201
Query: 242 VMGTYGYAAPEYMATGIFQLVLLLFTFECSL 272
+ GT Y APE + + +++ C L
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT 123
K +F+ +LGEG F V + A +R ++ + + +E+ ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
++ + +L HP VKL + +DD +L + G L ++ + S+ + + +
Sbjct: 61 DV--MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+ L YLH +I+RD K NILL+ + + +++DFG AK S+ +
Sbjct: 118 IV----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 243 MGTYGYAAPEYM 254
+GT Y +PE +
Sbjct: 172 VGTAQYVSPELL 183
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 37 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 146
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 147 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 252 EYM 254
E M
Sbjct: 205 EIM 207
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 29 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 139 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 252 EYM 254
E M
Sbjct: 197 EIM 199
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS-WTIRM 181
TEI L +P++V G+ +DD +V E + SL RR + +P + + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKX 201
Query: 242 VMGTYGYAAPEYMATGIFQLVLLLFTFECSL 272
+ GT Y APE + + +++ C L
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 63 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 114 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 172
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 173 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 226
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 227 APEIILSKGYNKAVDWWALGV 247
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VKLIG E+ ++ E G L + L R + S + A + LAYL
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAYL 507
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 508 ES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE 120
+ + + R + LG+G FG V+ G + T +A+K L ++
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA- 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+L E + + +L H LV+L + ++ +V E+M KGSL + L L +
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
M A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 112 M--AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 155
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 158
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 159 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 252 EYM 254
E M
Sbjct: 217 EIM 219
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 100
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 101 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 156
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 157 SKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 28 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 79 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 137
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 138 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYL 191
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 192 APEIILSKGYNKAVDWWALGV 212
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 35 QFERIKTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 86 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 144
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 145 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 198
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 199 APEIILSKGYNKAVDWWALGV 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-CQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS-WTIRM 181
TEI L +P++V G+ +DD +V E + SL RR + +P + + +R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 150
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 151 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKD 201
Query: 242 VMGTYGYAAPEYMATGIFQLVLLLFTFECSL 272
+ GT Y APE + + +++ C L
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS-WTIRM 181
TEI L +P++V G+ +DD +V E + SL RR + +P + + +R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQ 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+ +G+ YLH+++ VI+RD K N+ L+ + + K+ DFGLA +
Sbjct: 135 TI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKD 185
Query: 242 VMGTYGYAAPEYMATGIFQLVLLLFTFECSL 272
+ GT Y APE + + +++ C L
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 34/197 (17%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
R + D +G G F V+KG E T A + ++L + Q E E +
Sbjct: 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE---EAEX 78
Query: 128 LGQLYHPNLVKLIG---------YCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPL-S 176
L L HPN+V+ C+ +LV E G+L+ +L R + I+ L S
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRS 133
Query: 177 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD-LNYNAKLSDFGLAKDGPTGSQ 235
W ++ KGL +LH+ +I+RD K NI + + K+ D GLA T +
Sbjct: 134 WCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKR 183
Query: 236 SHVSTRVMGTYGYAAPE 252
+ + V+GT + APE
Sbjct: 184 ASFAKAVIGTPEFXAPE 200
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 34 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 143
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 144 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 252 EYM 254
E M
Sbjct: 202 EIM 204
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 35 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 144
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 145 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 252 EYM 254
E M
Sbjct: 203 EIM 205
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 26 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 135
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 136 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 252 EYM 254
E M
Sbjct: 194 EIM 196
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA-FLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + L L + M + A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--A 290
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 291 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA-FLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + L L + M + A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--A 290
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 291 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 27 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 136
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 137 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 252 EYM 254
E M
Sbjct: 195 EIM 197
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRRASYIQPL 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP- 110
Query: 176 SWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG 233
+ TI+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+
Sbjct: 111 AETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IY 162
Query: 234 SQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFEC 270
S V+ T Y APE + + + +++ C
Sbjct: 163 SYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 82
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 139
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 196 QYVSPELL 203
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 27 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 136
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 137 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 252 EYM 254
E M
Sbjct: 195 EIM 197
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 77
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 78 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 134 SKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 75
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 76 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 131
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 132 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 82
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 139
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 140 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 196 QYVSPELL 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--------G 117
AT + P + +G G +G V+K P +G +A+K + +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRRASYI 172
+ + ++ L HPN+V+L+ C D + LV+E + + L +L +
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 173 QPLSWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
P + TI+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+
Sbjct: 117 LP-AETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR-- 168
Query: 231 PTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFEC 270
S T V+ T Y APE + + + +++ C
Sbjct: 169 -IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 14 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 67
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 68 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 124
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 125 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 181 QYVSPELL 188
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 74
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 75 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 130
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 131 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V +G Y + + I V + E E + E + + QL
Sbjct: 15 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLD 68
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM--KVALGAAKG 190
+P +V+LIG C + + +LV E G L L + I P+S + +V++G
Sbjct: 69 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVSMG---- 122
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GY 248
+ YL ++ ++RD N+LL + AK+SDFGL+K S+ + R G + +
Sbjct: 123 MKYL--EEKNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKW 179
Query: 249 AAPE 252
APE
Sbjct: 180 YAPE 183
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 58 FSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG 117
F N + N+ LG+G F V + TG+ A K +N + L
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSA 69
Query: 118 H--LEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPL 175
+ E + +L HPN+V+L E+ LV++ + G L + R Y +
Sbjct: 70 RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 129
Query: 176 SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD--- 229
+ ++ + +AY HS+ +++R+ K N+LL KL+DFGLA +
Sbjct: 130 ASHCIQQI----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 230 -----GPTGSQSHVSTRVMGTYGYAAP-EYMATGIFQLVLLL 265
G G+ ++S V+ Y+ P + A G+ +LL+
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 50
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + L
Sbjct: 51 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYL 108
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + M + A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 109 RLPQLVDMSAQI--ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 140
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 197 QYVSPELL 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA-FLQEAQVM 56
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + F + + L + +A A
Sbjct: 57 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 113
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 114 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 151
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 140
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 197 QYVSPELL 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE 120
+ + + R + LG+G FG V+ G + T +A+K L ++
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA- 50
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
+L E + + +L H LV+L + ++ +V E+M KGSL + F + + L
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQL 107
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
+ +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 108 VDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 153
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 35 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 88
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 89 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 145
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 146 --SALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 202 QYVSPELL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 72
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 73 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 128
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 129 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 86
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 143
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 144 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 200 QYVSPELL 207
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 86
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 143
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 144 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 200 QYVSPELL 207
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 50
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + L
Sbjct: 51 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYL 108
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + M + A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 109 RLPQLVDMSAQI--ASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 159
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 83
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 140
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 141 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 197 QYVSPELL 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG V +G +P P + I + N S ++L E + Q HP+
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPH 69
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+VKLIG E+ ++ E G L + L R Y L+ I L A LAYL
Sbjct: 70 IVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA--LAYLE 125
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ N KL DFGL++
Sbjct: 126 S--KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 52 GSNIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
++ + L+ F ++G G +G V+KG H TG + A+K ++
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---RHV------KTGQLAAIKVMD 58
Query: 112 -----QESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLE------DDHRLLVYEFMPKGS 160
+E ++ + L + H H N+ G ++ DD LV EF GS
Sbjct: 59 VTGDEEEEIKQEINMLKKYSH-----HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 113
Query: 161 LENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAK 220
+ + + W + +GL++LH + KVI+RD K N+LL N K
Sbjct: 114 VTDLIKNTKGNTLKEEWI--AYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVK 169
Query: 221 LSDFGLAK--DGPTGSQSHVSTRVMGTYGYAAPEYMA 255
L DFG++ D G ++ +GT + APE +A
Sbjct: 170 LVDFGVSAQLDRTVGRRN----TFIGTPYWMAPEVIA 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + + +A+K+++ Q + + L EIK L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 141 YIHS--ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 252 EYM 254
E M
Sbjct: 199 EIM 201
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L
Sbjct: 31 SYIGEGAYGMVCSAYDN---------VNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 141 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 252 EYM 254
E M
Sbjct: 199 EIM 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 66 ATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN----QESLQ-GHLE 120
AT + P + +G G +G V+K P +G +A+K + +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCL--EDDHRL---LVYEFMPKGSLENHLFRRASYIQPL 175
+ ++ L HPN+V+L+ C D + LV+E + + L +L + P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP- 110
Query: 176 SWTIR--MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTG 233
+ TI+ M+ L +GL +LH++ +++RD K NIL+ KL+DFGLA+
Sbjct: 111 AETIKDLMRQFL---RGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR---IY 162
Query: 234 SQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFEC 270
S V+ T Y APE + + + +++ C
Sbjct: 163 SYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGTMSPEA-FLQEAQVM 233
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + L L + M + A
Sbjct: 234 KKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--A 290
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 291 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 328
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH-LEWLTEIKHLGQLYHP 134
LGEG + V+KG T ++A+K + E +G + E+ L L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
N+V L + LV+E++ K L+ +L + I + + + L +GLAY
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLL---RGLAYC 116
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
H + KV++RD K N+L++ KL+DFGLA+ ++++ + V T Y P+ +
Sbjct: 117 H--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDIL 172
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + ++ H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F+ +LGEG F V + A +R ++ + + +E+ ++ ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDV-- 85
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV-- 142
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY 246
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +GT
Sbjct: 143 --SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 247 GYAAPEYM 254
Y +PE +
Sbjct: 199 QYVSPELL 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLY 132
LGEG +G E A R T +AVK ++ + E + EI L
Sbjct: 12 QTLGEGAYG--------EVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N+VK G+ E + + L E+ G L + + +P + + G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA----QRFFHQLMAGVV 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 253 YMATGIFQ 260
+ F
Sbjct: 177 LLKRREFH 184
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLY 132
LGEG +G E A R T +AVK ++ + E + EI L
Sbjct: 13 QTLGEGAYG--------EVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN 63
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N+VK G+ E + + L E+ G L + + +P + ++ G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVV 119
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 253 YMATGIFQ 260
+ F
Sbjct: 178 LLKRREFH 185
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLY 132
LGEG +G E A R T +AVK ++ + E + EI L
Sbjct: 13 QTLGEGAYG--------EVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 63
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N+VK G+ E + + L E+ G L + + +P + ++ G+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVV 119
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 253 YMATGIFQ 260
+ F
Sbjct: 178 LLKRREFH 185
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT-EIKHLGQLY 132
LGEG +G E A R T +AVK ++ + E + EI L
Sbjct: 12 QTLGEGAYG--------EVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLN 62
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N+VK G+ E + + L E+ G L + + +P + ++ G+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVV 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 253 YMATGIFQ 260
+ F
Sbjct: 177 LLKRREFH 184
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+++++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + T + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLT-E 124
+F+ +LGEG F T T A+K L + + + + ++T E
Sbjct: 30 EDFKFGKILGEGSFST---------TVLARELATSREYAIKILEKRHIIKENKVPYVTRE 80
Query: 125 IKHLGQLYHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
+ +L HP VKL + +DD +L + G L ++ + S+ + + ++
Sbjct: 81 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
L YLH +I+RD K NILL+ + + +++DFG AK S+ + +
Sbjct: 140 V----SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 244 GTYGYAAPEYM 254
GT Y +PE +
Sbjct: 194 GTAQYVSPELL 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES--LQGHLE 120
+K +F +LG+G FG VF + T A+K L ++ + +E
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDDVE 62
Query: 121 WLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
K + L HP L + ++ V E++ G L H+ ++ + LS
Sbjct: 63 CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLS-- 118
Query: 179 IRMKVALGAAK---GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
+ AA+ GL +LHS ++YRD K NILLD + + K++DFG+ K+ G
Sbjct: 119 ---RATFYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173
Query: 236 SHVSTRVMGTYGYAAPEYM 254
+ GT Y APE +
Sbjct: 174 K--TNXFCGTPDYIAPEIL 190
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA----QRFFHQLMAG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KGSL + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLAAANILVGENLVCKVADFGLAR 162
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 117
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 176 PELLKRREFH 185
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + + G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA----QRFFHQLMAG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM 181
L E+ L QL HPN++KL + + + LV E G L + + R + + + I M
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI-M 110
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHV 238
K L G YLH K +++RD K N+LL+ K+ DFGL+ G +
Sbjct: 111 KQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 162
Query: 239 STRVMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 163 MKERLGTAYYIAPEVL 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P L KL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 116
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 175 PELLKRREFH 184
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L H N+VK G+ E + + L E+ G L + + +P + ++ G
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AG 115
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ YLH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y A
Sbjct: 116 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 251 PEYMATGIFQ 260
PE + F
Sbjct: 174 PELLKRREFH 183
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD--HRLLVYEFMP 157
G +V+ V ++ S + ++ E L HPN++ ++G C H L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
GSL N L +++ S + K AL A+G+A+LH+ + + + ++++D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAV--KFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM 150
Query: 218 NAKLS 222
A++S
Sbjct: 151 TARIS 155
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIK 126
F LG G FG V + +H TG A+K L+++ + +E K
Sbjct: 43 QFERIRTLGTGSFGRVM---LVKHK------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 127 HLGQLYH-PNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ Q + P LVKL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 94 RIQQAVNFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D K++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 17/190 (8%)
Query: 98 RPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRRASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTSN 210
E+ G L + + + Q L + +R+ L A + SD V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 211 ILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM-------ATGIFQLVL 263
+ LD N KL DFGLA+ + +GT Y +PE M + I+ L
Sbjct: 147 VFLDGKQNVKLGDFGLAR--ILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 264 LLFTFECSLL 273
LL+ C+L+
Sbjct: 205 LLYEL-CALM 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM 181
L E+ L QL HPN++KL + + + LV E G L + + R + + + + M
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAAVIM 127
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHV 238
K L G YLH K +++RD K N+LL+ K+ DFGL+ G +
Sbjct: 128 KQVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 179
Query: 239 STRVMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 180 MKERLGTAYYIAPEVL 195
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KG L + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 28 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 133
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 134 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 189
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VKLIG E+ ++ E G L + L R + S + A + LAYL
Sbjct: 72 HIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAYL 127
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ KL DFGL++
Sbjct: 128 ESKR--FVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 76 LGEGGFG--CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW---LTEIKHLGQ 130
+G+G FG C+ + + T + A+K +N++ E E++ +
Sbjct: 23 IGKGSFGKVCIVQ-----------KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HP LV L +++ +V + + G L HL + + + T+++ +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---TVKLFIC-ELVMA 127
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
L YL + ++I+RD K NILLD + + ++DF +A P +Q T + GT Y A
Sbjct: 128 LDYLQN--QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMA 182
Query: 251 PEYMAT 256
PE ++
Sbjct: 183 PEMFSS 188
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P L KL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWL 122
+ N+ LG+G F V + TG+ A K +N + L LE
Sbjct: 4 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE-- 52
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
E + +L HPN+V+L E+ LV++ + G L + R Y + + +
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 112
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD--------GP 231
+ + +AY HS+ +++R+ K N+LL KL+DFGLA + G
Sbjct: 113 I----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 232 TGSQSHVSTRVMGTYGYAAP-EYMATGIFQLVLLL 265
G+ ++S V+ Y+ P + A G+ +LL+
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 201
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 98 RPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRRASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTSN 210
E+ G L + + + Q L + +R+ L A + SD V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 211 ILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM-------ATGIFQLVL 263
+ LD N KL DFGLA+ + + +GT Y +PE M + I+ L
Sbjct: 147 VFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 264 LLFTFECSLL 273
LL+ C+L+
Sbjct: 205 LLYEL-CALM 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 54 NIKSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE 113
+ + + + + R + LG+G FG V+ G + T +A+K L
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPG 53
Query: 114 SLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQ 173
++ +L E + + +L H LV+L + ++ +V E+M KG L + F + +
Sbjct: 54 TMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLD--FLKGEMGK 109
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
L + +A A G+AY+ ++ ++RD + +NIL+ N K++DFGLA+
Sbjct: 110 YLRLPQLVDMAAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWL 122
+ N+ LG+G F V + TG+ A K +N + L LE
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE-- 53
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
E + +L HPN+V+L E+ LV++ + G L + R Y + + +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD--------GP 231
+ + +AY HS+ +++R+ K N+LL KL+DFGLA + G
Sbjct: 114 I----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 232 TGSQSHVSTRVMGTYGYAAP-EYMATGIFQLVLLL 265
G+ ++S V+ Y+ P + A G+ +LL+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 98 RPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLYHPNLVKLIGYCLEDDHRLL--VY 153
R G ++ K L+ S+ + + +E+ L +L HPN+V+ ++ + L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 154 EFMPKGSLENHLFRRASYIQPL--SWTIRMKVALGAAKGLAYLHSDKA-KVIYRDFKTSN 210
E+ G L + + + Q L + +R+ L A + SD V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 211 ILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM-------ATGIFQLVL 263
+ LD N KL DFGLA+ + + +GT Y +PE M + I+ L
Sbjct: 147 VFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204
Query: 264 LLFTFECSLL 273
LL+ C+L+
Sbjct: 205 LLYEL-CALM 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 43 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P L KL + +D+ L +V E+ P G + +HL R + +P + ++
Sbjct: 94 RILQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+++D K++DFG AK G T G+ ++
Sbjct: 153 LT----FEYLHS--LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYL 206
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 207 APEIILSKGYNKAVDWWALGV 227
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH----LEWL 122
+ N+ LG+G F V + TG+ A K +N + L LE
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLE-- 53
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK 182
E + +L HPN+V+L E+ LV++ + G L + R Y + + +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD--------GP 231
+ + +AY HS+ +++R+ K N+LL KL+DFGLA + G
Sbjct: 114 I----LESIAYCHSN--GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 232 TGSQSHVSTRVMGTYGYAAP-EYMATGIFQLVLLL 265
G+ ++S V+ Y+ P + A G+ +LL+
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 33 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + + T Y AP
Sbjct: 143 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 252 EYM 254
E M
Sbjct: 201 EIM 203
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLY 132
S +GEG +G V + + + +A+K+++ Q + + L EIK L +
Sbjct: 34 SYIGEGAYGMVCSAYDN---------LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N++ + + ++ + +E L++ Q LS +GL
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK-TQHLSNDHICYFLYQILRGLK 143
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAP 251
Y+HS A V++RD K SN+LL+ + K+ DFGLA+ P + + T Y AP
Sbjct: 144 YIHS--ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 252 EYM 254
E M
Sbjct: 202 EIM 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 37 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 142
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 143 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 198
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V A R +G ++AVK+++ Q E+ + H N
Sbjct: 32 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 137
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 138 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 193
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL-NQESLQGHLEWLTEIKHLGQLYHP 134
+GEG FG V +G +P P M +A+K N S ++L E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
++VKLIG E+ ++ E G L + L R + S + A + LAYL
Sbjct: 452 HIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLIL---YAYQLSTALAYL 507
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
S + ++RD N+L+ KL DFGL++
Sbjct: 508 ES--KRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 39 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 144
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 145 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 200
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+LG G FG V K E T TG+ +A K + ++ E EI + QL H
Sbjct: 95 EILGGGRFGQVHKC---EET------ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH 145
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
NL++L + +LV E++ G L + + + + L + MK +G+ +
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRH 202
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+H + +++ D K NIL +N +A K+ DFGLA+ + V+ GT + A
Sbjct: 203 MH--QMYILHLDLKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLA 256
Query: 251 PEYM 254
PE +
Sbjct: 257 PEVV 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
+ R + LG+G FG V+ G + T +A+K L ++ +L E + +
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTR----------VAIKTLKPGNMSPEA-FLQEAQVM 234
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
+L H LV+L + ++ +V E+M KGSL + F + + L + +A A
Sbjct: 235 KKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIA 291
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
G+AY+ ++ ++RD + +NIL+ N K++DFGL +
Sbjct: 292 SGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLGR 329
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
+G +AVK ++ Q E+ + H N+V++ L + ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 161 LENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAK 220
L + + + + ++ V + LAYLH+ VI+RD K+ +ILL L+ K
Sbjct: 129 LTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVK 181
Query: 221 LSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIF 259
LSDFG ++KD P ++GT + APE ++ ++
Sbjct: 182 LSDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISRSLY 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG FG K + + T G VI +++ S + E E+ L + HPN
Sbjct: 32 IGEGSFG---KAILVKST----EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYI----QPLSWTIRMKVALGAAKGL 191
+V+ E+ +V ++ G L + + + Q L W +++ +AL
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK----- 139
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 251
H K+++RD K+ NI L + +L DFG+A+ S ++ +GT Y +P
Sbjct: 140 ---HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYYLSP 194
Query: 252 EYM-------ATGIFQLVLLLFTFECSLLH 274
E + I+ L +L+ C+L H
Sbjct: 195 EICENKPYNNKSDIWALGCVLYEL-CTLKH 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 159 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 264
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 265 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 320
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLTEIKHLGQLYH 133
LG+G F V + + G A K +N + L + H + E + L H
Sbjct: 30 LGKGAFSVVRRC---------VKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP-LSWTIRMKVALGAAKGLA 192
PN+V+L E+ H L+++ + G L + R Y + S I+ + A
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------A 133
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
LH + V++RD K N+LL KL+DFGLA + Q+ GT GY
Sbjct: 134 VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYL 191
Query: 250 APEYM 254
+PE +
Sbjct: 192 SPEVL 196
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 28/196 (14%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLG 129
F+ + + G+G FG V G TGM +A+K++ Q+ + E L ++ L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 130 QLYHPNLVKLIGYCL---EDDHRLL----VYEFMPKG--SLENHLFRRASYIQPLSWTIR 180
L+HPN+V+L Y E D R + V E++P + +RR P I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP----IL 130
Query: 181 MKVAL-GAAKGLAYLHSDKAKVIYRDFKTSNILL-DLNYNAKLSDFGLAKDGPTGSQSHV 238
+KV L + + LH V +RD K N+L+ + + KL DFG AK S S
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KLSPSEP 187
Query: 239 STRVMGTYGYAAPEYM 254
+ + + Y APE +
Sbjct: 188 NVAYICSRYYRAPELI 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
+GEG G V + +G ++AVK+++ Q E+ + H N
Sbjct: 82 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V++ L D +V EF+ G+L + + + ++ V L + L+ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLH 187
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
+ VI+RD K+ +ILL + KLSDFG + ++GT + APE ++
Sbjct: 188 AQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGTPYWMAPELIS 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L H ++V G+ ++D +V E + SL RR + +P + ++
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTRV 242
LG YLH ++ VI+RD K N+ L+ + K+ DFGLA K G + V +
Sbjct: 125 VLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 175
Query: 243 MGTYGYAAPEYMA 255
GT Y APE ++
Sbjct: 176 CGTPNYIAPEVLS 188
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGS 160
M+I K+L S + H + E + L HPN+V+L E+ H L+++ + G
Sbjct: 40 AAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 96
Query: 161 LENHLFRRASYIQP-LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN- 218
L + R Y + S I+ + A LH + V++R+ K N+LL
Sbjct: 97 LFEDIVAREYYSEADASHCIQQILE-------AVLHCHQMGVVHRNLKPENLLLASKLKG 149
Query: 219 --AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
KL+DFGLA + Q+ GT GY +PE +
Sbjct: 150 AAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVL 185
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGH--LEWLTEI 125
+ F +LG+G FG V + + + G+ + +AVK L + + E+L E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQED------GSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHR------LLVYEFMPKGSLENHLFRRASYI------Q 173
+ + HP++ KL+G L + +++ FM G L H F AS I
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGENPFNL 134
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
PL +R V + A G+ YL S I+RD N +L + ++DFGL++
Sbjct: 135 PLQTLVRFMVDI--ACGMEYLSS--RNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+GGF F E + A + I K L + Q + EI L H +
Sbjct: 47 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQH 100
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V G+ ++D +V E + SL RR + +P + ++ LG YLH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTRVMGTYGYAAPEYM 254
++ VI+RD K N+ L+ + K+ DFGLA K G + V + GT Y APE +
Sbjct: 157 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVL 211
Query: 255 A 255
+
Sbjct: 212 S 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L H ++V G+ ++D +V E + SL RR + +P + ++
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA-KDGPTGSQSHVSTRV 242
LG YLH ++ VI+RD K N+ L+ + K+ DFGLA K G + V +
Sbjct: 151 VLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---L 201
Query: 243 MGTYGYAAPEYMA 255
GT Y APE ++
Sbjct: 202 CGTPNYIAPEVLS 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 134
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
D LG G FG V +G Y + + I V + E E + E + + QL
Sbjct: 341 DIELGCGNFGSVRQG-----VYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLD 394
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRM--KVALGAAKG 190
+P +V+LIG C + + +LV E G L L + I P+S + +V++G
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVSMG---- 448
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTY--GY 248
+ YL ++ ++R+ N+LL + AK+SDFGL+K S+ + R G + +
Sbjct: 449 MKYL--EEKNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKW 505
Query: 249 AAPE 252
APE
Sbjct: 506 YAPE 509
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW----TIRMKVALGAAK 189
P +V+L +D + +V E+MP G L N + ++Y P W T + +AL A
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
+ +H RD K N+LLD + + KL+DFG H T V GT Y
Sbjct: 192 SMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYI 242
Query: 250 APEYMAT 256
+PE + +
Sbjct: 243 SPEVLKS 249
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMV-IAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
VLG+G +G V+ G R + V IA+K + + + EI L H
Sbjct: 29 VLGKGTYGIVYAG----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+V+ +G E+ + E +P GSL L + ++ TI +GL Y
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKY 137
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 251
LH + ++++RD K N+L++ Y+ K+SDFG +K + + GT Y AP
Sbjct: 138 LHDN--QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 192
Query: 252 EYMATGI--FQLVLLLFTFECSLLHFSLQLP 280
E + G + +++ C+++ + P
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRRASYIQPLSWTIRMK 182
N+V LI C LV++F G L N L + LS R+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM 131
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVST 240
L GL Y+H + K+++RD K +N+L+ + KL+DFGLA+ SQ +
Sbjct: 132 QML--LNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 241 RVMGTYGYAAPEYM 254
+ T Y PE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 101 TGMVIAVKRL----NQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFM 156
TG VIAVK++ N+E + L L + L P +V+ G + + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDVFIAMELM 106
Query: 157 PKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 216
G+ L +R P+ I K+ + K L YL +K VI+RD K SNILLD
Sbjct: 107 --GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYL-KEKHGVIHRDVKPSNILLDER 161
Query: 217 YNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
KL DFG++ R G Y APE +
Sbjct: 162 GQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERI 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 79
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 134
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 135 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMV-IAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
VLG+G +G V+ G R + V IA+K + + + EI L H
Sbjct: 15 VLGKGTYGIVYAG----------RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
N+V+ +G E+ + E +P GSL L + ++ TI +GL Y
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKY 123
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 251
LH + ++++RD K N+L++ Y+ K+SDFG +K + + GT Y AP
Sbjct: 124 LHDN--QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 178
Query: 252 EYMATG 257
E + G
Sbjct: 179 EIIDKG 184
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 59
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 114
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 115 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW-LTEIKHLGQLYHP 134
+GEG +G V + +H +A+K+++ Q + + L EI+ L + H
Sbjct: 51 IGEGAYGMVSSAY--DHV-------RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
N++ + + ++ + +E L++ Q LS +GL Y+
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYI 160
Query: 195 HSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHVSTRVMGTYGYAAPEY 253
HS A V++RD K SN+L++ + K+ DFGLA+ P + T + T Y APE
Sbjct: 161 HS--ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 254 M 254
M
Sbjct: 219 M 219
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 70
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 125
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 126 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRRASYIQPLSWTIRMK 182
N+V LI C LV++F G L N L + LS R+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM 131
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVST 240
L GL Y+H + K+++RD K +N+L+ + KL+DFGLA+ SQ +
Sbjct: 132 QML--LNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 241 RVMGTYGYAAPEYM 254
+ T Y PE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 28/201 (13%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLE 120
L+ ++ V+G G FG V T V A+K L++ + +
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEV---------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 114
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSW-- 177
+ E + + + V + Y +DD L +V E+MP G L N + ++Y P W
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWAR 171
Query: 178 --TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
T + +AL A + ++H RD K N+LLD + + KL+DFG
Sbjct: 172 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 236 SHVSTRVMGTYGYAAPEYMAT 256
T V GT Y +PE + +
Sbjct: 224 VRCDTAV-GTPDYISPEVLKS 243
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 28/201 (13%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLE 120
L+ ++ V+G G FG V T V A+K L++ + +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV---------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSW-- 177
+ E + + + V + Y +DD L +V E+MP G L N + ++Y P W
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWAR 176
Query: 178 --TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
T + +AL A + ++H RD K N+LLD + + KL+DFG
Sbjct: 177 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 236 SHVSTRVMGTYGYAAPEYMAT 256
T V GT Y +PE + +
Sbjct: 229 VRCDTAV-GTPDYISPEVLKS 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 28/201 (13%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLE 120
L+ ++ V+G G FG V T V A+K L++ + +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV---------QLVRHKSTRKVYAMKLLSKFEMIKRSDSA 119
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSW-- 177
+ E + + + V + Y +DD L +V E+MP G L N + ++Y P W
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWAR 176
Query: 178 --TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQ 235
T + +AL A + ++H RD K N+LLD + + KL+DFG
Sbjct: 177 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 236 SHVSTRVMGTYGYAAPEYMAT 256
T V GT Y +PE + +
Sbjct: 229 VRCDTAV-GTPDYISPEVLKS 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN---QESLQGHLEWLTEIKHLGQLY 132
LGE G G G +++ + P +G ++AVKR+ E Q L L ++ + +
Sbjct: 27 LGEIGRGAY--GSVNKMVHKP----SGQIMAVKRIRSTVDEKEQKQL--LMDLDVVMRSS 78
Query: 133 H-PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGL 191
P +V+ G + + E M + + + + + I K+ L K L
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAP 251
+L + K+I+RD K SNILLD + N KL DFG++ S TR G Y AP
Sbjct: 139 NHLKEN-LKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAP 194
Query: 252 E 252
E
Sbjct: 195 E 195
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 64
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 64
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 120 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 105 IAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENH 164
I + R S + + L E+ L L HPN++KL + + + LV E G L +
Sbjct: 67 IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDE 126
Query: 165 LFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKL 221
+ R + + + I +V G+ YLH K +++RD K N+LL+ K+
Sbjct: 127 IIHRMKFNEVDAAVIIKQVL----SGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKI 180
Query: 222 SDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
DFGL+ +Q + R +GT Y APE +
Sbjct: 181 VDFGLS--AVFENQKKMKER-LGTAYYIAPEVL 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 22/156 (14%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
LG G FG V G W ++ +A+K + + S+ E++ E K + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMIKEGSMSED-EFIEEAKVMMNLSHE 63
Query: 135 NLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLA 192
LV+L G C + ++ E+M G L N+L R Q L +++ + +
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 118
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
YL S + ++RD N L++ K+SDFGL++
Sbjct: 119 YLES--KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 25 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRRASYIQPLSWTIRMK 182
N+V LI C LV++F G L N L + LS R+
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM 130
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVST 240
L GL Y+H +K +++RD K +N+L+ + KL+DFGLA+ SQ +
Sbjct: 131 QML--LNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 241 RVMGTYGYAAPEYM 254
+ T Y PE +
Sbjct: 187 NRVVTLWYRPPELL 200
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 168
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 169 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGV 247
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 84 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 142
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 143 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 196
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGV 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 36/199 (18%)
Query: 69 NFRPDSVLGEGGFGC-VFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
+F P VLG G G V++G D +AVKR+ E + ++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD-----------VAVKRILPECFSFADREVQLLRE 73
Query: 128 LGQLYHPNLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASY---IQPLSWTIRMKV 183
+ HPN+++ +C E D + + +L+ ++ ++ ++P++ +
Sbjct: 74 SDE--HPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT------L 123
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-----NYNAKLSDFGLAKDGPTGSQSHV 238
GLA+LHS +++RD K NIL+ + A +SDFGL K G S
Sbjct: 124 LQQTTSGLAHLHS--LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS-F 180
Query: 239 STR--VMGTYGYAAPEYMA 255
S R V GT G+ APE ++
Sbjct: 181 SRRSGVPGTEGWIAPEMLS 199
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES---LQGHLEWLTEI 125
F LG G FG V + +H TG A+K L+++ L+ L E
Sbjct: 42 QFERIKTLGTGSFGRVM---LVKHM------ETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 126 KHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVA 184
+ L + P LVKL + +D+ L +V E++ G + +HL R + +P + ++
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GSQSHV 238
L YLHS +IYRD K N+L+D +++DFG AK G T G+ ++
Sbjct: 152 LT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYL 205
Query: 239 STRVMGTYGY-AAPEYMATGI 258
+ ++ + GY A ++ A G+
Sbjct: 206 APEIILSKGYNKAVDWWALGV 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG--HLEWLTEIKHLGQLYH 133
+G+G FG VFK H TG +A+K++ E+ + + L EIK L L H
Sbjct: 26 IGQGTFGEVFKA---RHR------KTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 134 PNLVKLIGYCLEDDHRL--------LVYEFMP---KGSLENHLFRRASYIQPLSWTIRMK 182
N+V LI C LV++F G L N L + LS R+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM 131
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPTGSQSHVST 240
L GL Y+H + K+++RD K +N+L+ + KL+DFGLA+ SQ +
Sbjct: 132 QML--LNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 241 RVMGTYGYAAPEYM 254
+ T Y PE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 110 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 168
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 169 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGT 222
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGV 247
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI L H ++V G+ ++D +V E + SL RR + +P + ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
LG YLH ++ VI+RD K N+ L+ + K+ DFGLA + + +
Sbjct: 127 VLGCQ----YLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LC 178
Query: 244 GTYGYAAPEYMA 255
GT Y APE ++
Sbjct: 179 GTPNYIAPEVLS 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+GGF F E + A + I K L + Q + EI L H +
Sbjct: 25 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQH 78
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V G+ ++D +V E + SL RR + +P + ++ LG YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
++ VI+RD K N+ L+ + K+ DFGLA + + + GT Y APE ++
Sbjct: 135 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS 190
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+GGF F E + A + I K L + Q + EI L H +
Sbjct: 29 LGKGGFAKCF-----EISDADTKEVFAGKIVPKSLLLKPHQRE-KMSMEISIHRSLAHQH 82
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
+V G+ ++D +V E + SL RR + +P + ++ LG YLH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMA 255
++ VI+RD K N+ L+ + K+ DFGLA + + + GT Y APE ++
Sbjct: 139 RNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS 194
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V+ G + +T +A+K L ++ +L E + + +L H
Sbjct: 17 LGNGQFGEVWMGTWNGNTK----------VAIKTLKPGTMSPE-SFLEEAQIMKKLKHDK 65
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV+L + ++ +V E+M KGSL + F + + L + +A A G+AY+
Sbjct: 66 LVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMAYI- 121
Query: 196 SDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK 228
++ I+RD +++NIL+ K++DFGLA+
Sbjct: 122 -ERMNYIHRDLRSANILVGNGLICKIADFGLAR 153
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPIGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 139
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 140 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 192 -----WYRAPEIM 199
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 74 SVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
++G+G FG V+ G W H R +I ++R N++ L+ + E+ Q
Sbjct: 39 ELIGKGRFGQVYHGRW---HGEVAIR-----LIDIERDNEDQLKA---FKREVMAYRQTR 87
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
H N+V +G C+ H L + + KG + R A + ++ T ++A KG+
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKT--RQIAQEIVKGMG 144
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGL 226
YLH+ ++++D K+ N+ D N ++DFGL
Sbjct: 145 YLHA--KGILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 58/253 (22%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMV-------------IAVKRLNQESL 115
++R L +G F + D YA + ++ I++K +
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKS-KYDDF 90
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCL-------EDDHRLLVYEFMPKGSL----ENH 164
+ L+ +T+IK+ YCL D ++YE+M S+ E
Sbjct: 91 KNELQIITDIKN-------------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 165 LFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDF 224
+Y + + + +Y+H++K + +RD K SNIL+D N KLSDF
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDF 196
Query: 225 GLAKDGPTGSQSHVSTRV---MGTYGYAAPEYMA---------TGIFQLVLLLFTFECSL 272
G S+ V ++ GTY + PE+ + I+ L + L+ ++
Sbjct: 197 G-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 273 LHFSLQLPMCVLY 285
+ FSL++ + L+
Sbjct: 250 VPFSLKISLVELF 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYMATGI 258
Y APE M +
Sbjct: 187 -----WYRAPEIMLNAM 198
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 39 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 145
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 146 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 198 -----WYRAPEIM 205
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 139
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 140 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 192 -----WYRAPEIM 199
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 148
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 149 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGV 227
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGV 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 140
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 141 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 193 -----WYRAPEIM 200
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 76 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 134
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 135 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGT 188
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGV 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVST 240
++ L YLHS +IYRD K N+L+D +++DFG AK V
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 241 RVMGTYGYAAPEYMATGI 258
R G PEY+A I
Sbjct: 194 RTWXLCG--TPEYLAPAI 209
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 136
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 189 -----WYRAPEIM 196
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 141
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 142 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 194 -----WYRAPEIM 201
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 141
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 142 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 194 -----WYRAPEIM 201
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 136
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 189 -----WYRAPEIM 196
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 51 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 157
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 158 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-- 209
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 210 ---WYRAPEIM 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 139
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 140 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 191
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 192 ---WYRAPEIM 199
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 141
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 142 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 193
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 194 ---WYRAPEIM 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 35 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 141
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 142 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 194 -----WYRAPEIM 201
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 136
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 188
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 189 ---WYRAPEIM 196
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 146
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 147 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 199 -----WYRAPEIM 206
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 154
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 155 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 206
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 207 ---WYRAPEIM 214
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 30 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 136
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 137 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 189 -----WYRAPEIM 196
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 25 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 131
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 183
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 184 ---WYRAPEIM 191
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+++D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
+++ ++ + GY A ++ A G+
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGV 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 39 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 145
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 146 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 197
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 198 ---WYRAPEIM 205
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 47 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 153
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 154 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 205
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 206 ---WYRAPEIM 213
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 146
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 147 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 198
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 199 ---WYRAPEIM 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 40 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 146
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 147 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 198
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 199 ---WYRAPEIM 206
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 25 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 131
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 132 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 183
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 184 ---WYRAPEIM 191
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 33 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 139
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 140 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 192 -----WYRAPEIM 199
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 27 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 133
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 134 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 185
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 186 -----WYRAPEIM 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 51 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 157
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 158 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 209
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 210 ---WYRAPEIM 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 26 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 132
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 133 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 184
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 185 ---WYRAPEIM 192
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 41/213 (19%)
Query: 64 KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL 122
+T R+ +G+G +G V++G W E+ +AVK S + W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIF---SSRDEKSWF 48
Query: 123 --TEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMPKGSLENHLFRRASYIQPLS 176
TE+ + L H N++ I + H L+ + GSL ++L + L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLD 103
Query: 177 WTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
+++ L A GLA+LH + K + +RD K+ NIL+ N ++D GLA
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--- 160
Query: 231 PTGSQSHVSTRV-----MGTYGYAAPEYMATGI 258
SQS V +GT Y APE + I
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 140
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 141 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 192
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 193 ---WYRAPEIM 200
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 130
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 183 ---WYRAPEIM 190
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 76 LGEGGFGCV--FKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY- 132
LGEGGF V +G D H YA R ++ ++ ++E Q + + +L+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKR-----ILCHEQQDREEAQREAD-------MHRLFN 84
Query: 133 HPNLVKLIGYCLED----DHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
HPN+++L+ YCL + L+ F +G+L N + R L+ + + LG
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG 225
+GL +H+ +RD K +NILL L D G
Sbjct: 145 RGLEAIHA--KGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFRRA----SYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + A ++Q L + I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQI-- 130
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 183 -----WYRAPEIM 190
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 140
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 141 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 192
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 193 ---WYRAPEIM 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK-VALGAAKGLA 192
N+VKL +LV+E L+ L + + ++ K L G+A
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
Y H +V++RD K N+L++ K++DFGLA+ G T + T Y AP+
Sbjct: 115 YCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPD 170
Query: 253 YM 254
+
Sbjct: 171 VL 172
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 46/232 (19%)
Query: 50 LLGSNIKSFSFNGL-----KTATRNFRPDSVLGEGGFGCVFKG-WIDEHTYAPARPGTGM 103
LL + S S +GL +T R +G+G +G V++G W E+
Sbjct: 14 LLDHSCTSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGEN----------- 62
Query: 104 VIAVKRLNQESLQGHLEWL--TEIKHLGQLYHPNLVKLIGYCLEDDHR----LLVYEFMP 157
+AVK S + W TE+ + L H N++ I + H L+ +
Sbjct: 63 -VAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNI 211
GSL ++L + L +++ L A GLA+LH + K + +RD K+ NI
Sbjct: 119 MGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 173
Query: 212 LLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV-----MGTYGYAAPEYMATGI 258
L+ N ++D GLA SQS V +GT Y APE + I
Sbjct: 174 LVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK-VALGAAKGLA 192
N+VKL +LV+E L+ L + + ++ K L G+A
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
Y H +V++RD K N+L++ K++DFGLA+ G T + T Y AP+
Sbjct: 115 YCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPD 170
Query: 253 YM 254
+
Sbjct: 171 VL 172
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLT--EIKHLGQLYH 133
+GEG +G V+K A+ G A+K++ E + T EI L +L H
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMK-VALGAAKGLA 192
N+VKL +LV+E L+ L + + ++ K L G+A
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
Y H +V++RD K N+L++ K++DFGLA+ G T + T Y AP+
Sbjct: 115 YCHD--RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPD 170
Query: 253 YM 254
+
Sbjct: 171 VL 172
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGL + +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + + E TG A K + EI+ + L HP
Sbjct: 59 LGTGAFGVVHR--VTER-------ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV L +D+ +++YEFM G L + A +S ++ KGL ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 196 SDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
+ ++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 167 EN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 122 LTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIR 180
L E + L + P LVKL + +D+ L +V E++ G + +HL R + +P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA 147
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK--DGPT----GS 234
++ L YLHS +IYRD K N+L+D +++DFG AK G T G+
Sbjct: 148 AQIVLT----FEYLHS--LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 235 QSHVSTRVMGTYGY-AAPEYMATGI 258
++ ++ + GY A ++ A G+
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGV 226
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + + E TG A K + EI+ + L HP
Sbjct: 165 LGTGAFGVVHR--VTER-------ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV L +D+ +++YEFM G L + A +S ++ KGL ++H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 196 SDKAKVIYRDFKTSNILLDLNYNA--KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
+ ++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 273 EN--NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPE 326
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG G FG V + TG V K +N EI + QL+HP
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 136 LVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYL 194
L+ L ED + + L+ EF+ G L R A+ +S + A +GL ++
Sbjct: 110 LINLHD-AFEDKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 195 HSDKAKVIYRDFKTSNILLDLNY--NAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
H + +++ D K NI+ + + K+ DFGLA V+T T +AAPE
Sbjct: 166 H--EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + +G+ IAVK+L++ +S+ E++ L +
Sbjct: 57 SPVGSGAYGSVCSSY---------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 163
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 164 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 216 -----WYRAPEIM 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRLLVYEFMP 157
+AVK+L++ +SL E++ L L H N++ L+ +ED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 158 KGSLENHLFRRA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 214
L N + +A ++Q L + + +GL Y+HS A +I+RD K SN+ ++
Sbjct: 116 GADLNNIVKSQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVAVN 165
Query: 215 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ ++ DFGLA+ +V+TR Y APE M
Sbjct: 166 EDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 70 FRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLG 129
F +S LG G V++ + GT A+K L + + + TEI L
Sbjct: 55 FEVESELGRGATSIVYRC---------KQKGTQKPYALKVLKKTVDKKIVR--TEIGVLL 103
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
+L HPN++KL LV E + G L + + + Y + + A A K
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE--------RDAADAVK 155
Query: 190 ----GLAYLHSDKAKVIYRDFKTSNILLDL---NYNAKLSDFGLAKDGPTGSQSHVSTRV 242
+AYLH + +++RD K N+L + K++DFGL+K + V
Sbjct: 156 QILEAVAYLHEN--GIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTV 210
Query: 243 MGTYGYAAPEYM 254
GT GY APE +
Sbjct: 211 CGTPGYCAPEIL 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
+LG+G VF+G TG + A+K N S ++ + E + L +L
Sbjct: 15 DILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 133 HPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRA-SYIQPLS-WTIRMKVALG 186
H N+VKL + +E++ H++L+ EF P GSL L + +Y P S + I ++ +G
Sbjct: 66 HKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA----KLSDFGLAKDGPTGSQSHVSTRV 242
G+ +L + +++R+ K NI+ + + KL+DFG A++ Q +
Sbjct: 124 ---GMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSL 175
Query: 243 MGTYGYAAPEYMATGIFQ 260
GT Y P+ + +
Sbjct: 176 YGTEEYLHPDMYERAVLR 193
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 60 FNGLKTATR---NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ 116
F + T TR +++ LG+G F V + P + +I K+L S +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCV----KKTPTQEYAAKIINTKKL---SAR 72
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS 176
H + E + L HPN+V+L E+ LV++ + G L + R Y + +
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 177 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTG 233
++ + + ++H + +++RD K N+LL KL+DFGLA +
Sbjct: 133 SHCIHQI----LESVNHIH--QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 234 SQSHVSTRVMGTYGYAAPEYM 254
Q+ GT GY +PE +
Sbjct: 187 QQAWFG--FAGTPGYLSPEVL 205
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEFM-PKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E M P L + + R + + L+ + +V L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-L 124
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 125 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 172
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ D+GLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 130
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 131 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 182
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 183 ---WYRAPEIM 190
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE-WLTEIKHLGQLY 132
+LG+G VF+G TG + A+K N S ++ + E + L +L
Sbjct: 15 DILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 133 HPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRA-SYIQPLS-WTIRMKVALG 186
H N+VKL + +E++ H++L+ EF P GSL L + +Y P S + I ++ +G
Sbjct: 66 HKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA----KLSDFGLAKDGPTGSQSHVSTRV 242
G+ +L + +++R+ K NI+ + + KL+DFG A++ Q +
Sbjct: 124 ---GMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVXL 175
Query: 243 MGTYGYAAPEYMATGIFQ 260
GT Y P+ + +
Sbjct: 176 YGTEEYLHPDMYERAVLR 193
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 154
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 155 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 206
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 207 ---WYRAPEIM 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 47 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 153
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 154 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 205
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 206 ---WYRAPEIM 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD--HRLLVYEFMP 157
G +V+ V ++ S + ++ E L HPN++ ++G C H L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
GSL N L +++ S + K AL A+G A+LH+ + + + ++ +D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAV--KFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDX 150
Query: 218 NAKLS 222
A++S
Sbjct: 151 TARIS 155
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 34 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 140
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 141 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 193 -----WYRAPEIM 200
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPAR----PGTGMVIAVKRLNQESLQ 116
+G+ T N S++ G+ V K I +Y+ + T M AVK +++ S +
Sbjct: 9 SGVDLGTENLYFQSMVFSDGY--VVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-SKR 65
Query: 117 GHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS 176
E + + GQ HPN++ L + H LV E M G L + + R+ + + +
Sbjct: 66 DPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 177 WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNYNA---KLSDFGLAKD--- 229
+ + K + YLHS V++RD K SNIL +D + N ++ DFG AK
Sbjct: 124 SFVLHTI----GKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 230 ------GPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
P + + V+ V+ GY I+ L +LL+T
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDE----GCDIWSLGILLYTM 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRLLVYEFMP 157
+AVK+L++ +SL E++ L L H N++ L+ +ED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 158 KGSLENHLFRRA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 214
L N + +A ++Q L + + +GL Y+HS A +I+RD K SN+ ++
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVAVN 165
Query: 215 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ ++ DFGLA+ +V+TR Y APE M
Sbjct: 166 EDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQLYH 133
+G G +G V + TG +AVK+L++ +S+ E++ L + H
Sbjct: 40 VGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 134 PNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRMKV 183
N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI---- 144
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ +V+TR
Sbjct: 145 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-- 196
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 197 ---WYRAPEIM 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 30/189 (15%)
Query: 73 DSVLGEGGFG----CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHL 128
D LGEG F CV K + AVK +++ + +T +K
Sbjct: 16 DKPLGEGSFSICRKCVHKK-------------SNQAFAVKIISKRMEANTQKEITALKLC 62
Query: 129 GQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
HPN+VKL + H LV E + G LF R + S T +
Sbjct: 63 EG--HPNIVKLHEVFHDQLHTFLVMELLNGGE----LFERIKKKKHFSETEASYIMRKLV 116
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
++++H V++RD K N+L + N K+ DFG A+ P +Q + T T
Sbjct: 117 SAVSHMHD--VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-T 172
Query: 246 YGYAAPEYM 254
YAAPE +
Sbjct: 173 LHYAAPELL 181
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 105 IAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLI-----GYCLEDDHRLLVYEFMP 157
+AVK+L++ +SL E++ L L H N++ L+ +ED + + +
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 158 KGSLENHLFRRA---SYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 214
L N + +A ++Q L + + +GL Y+HS A +I+RD K SN+ ++
Sbjct: 108 GADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIHS--AGIIHRDLKPSNVAVN 157
Query: 215 LNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+ ++ DFGLA+ +V+TR Y APE M
Sbjct: 158 EDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 192
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 57 SFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SL 115
S + + P LG G +G V ++ + P +G ++AVKR+ +
Sbjct: 40 SIGNQNFEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNS 90
Query: 116 QGHLEWLTEIK-HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP 174
Q L ++ + + P V G + + E M SL+ + Q
Sbjct: 91 QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQT 149
Query: 175 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+ I K+A+ K L +LHS K VI+RD K SN+L++ K+ DFG++
Sbjct: 150 IPEDILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 41/201 (20%)
Query: 76 LGEGGFGCVFKG-WIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL--TEIKHLGQLY 132
+G+G +G V++G W E+ +AVK S + W TE+ + L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIF---SSRDEKSWFRETELYNTVMLR 60
Query: 133 HPNLVKLIGYCLEDDHR----LLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAA 188
H N++ I + H L+ + GSL ++L + L +++ L A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIA 115
Query: 189 KGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
GLA+LH + K + +RD K+ NIL+ N ++D GLA SQS V
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDV 172
Query: 243 -----MGTYGYAAPEYMATGI 258
+GT Y APE + I
Sbjct: 173 GNNPRVGTKRYMAPEVLDETI 193
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 62 GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHLE 120
++ + P LG G +G V ++ + P +G ++AVKR+ + Q
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKR 51
Query: 121 WLTEIK-HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTI 179
L ++ + + P V G + + E M SL+ + Q + I
Sbjct: 52 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDI 110
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
K+A+ K L +LHS K VI+RD K SN+L++ K+ DFG++
Sbjct: 111 LGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 188 ----YRAPELI 194
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 48 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 154
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 155 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-- 206
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 207 ---WYRAPEIM 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 29/174 (16%)
Query: 65 TATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRL----NQESLQGHLE 120
T+ +R + LGEG +G V+K ID T +A+KR+ +E + G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA-IDT--------VTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 121 WLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
+ E+ L +L H N+++L + +HRL L++E+ EN L + +S +
Sbjct: 81 -IREVSLLKELQHRNIIEL-KSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRV 133
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-----KLSDFGLAK 228
G+ + HS + ++RD K N+LL ++ + K+ DFGLA+
Sbjct: 134 IKSFLYQLINGVNFCHS--RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 44/182 (24%)
Query: 69 NFRPDSVLGEGGFGCVFKGW--IDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVM 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRL-------------LVYEFMPKGSL------ENHLFR 167
L L H +V+ LE + + + E+ G+L EN +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 168 RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
R Y W + ++ + L+Y+HS +I+RD K NI +D + N K+ DFGLA
Sbjct: 115 RDEY-----WRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 228 KD 229
K+
Sbjct: 164 KN 165
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T M AVK +++ S + E + + GQ HPN++ L + + +V E M G
Sbjct: 45 ATNMEFAVKIIDK-SKRDPTEEIEILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 160 SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNYN 218
L + + R+ + + + + + K + YLH+ V++RD K SNIL +D + N
Sbjct: 102 ELLDKILRQKFFSEREASAVLFTIT----KTVEYLHAQG--VVHRDLKPSNILYVDESGN 155
Query: 219 A---KLSDFGLAKD---------GPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLF 266
++ DFG AK P + + V+ V+ GY A A I+ L +LL+
Sbjct: 156 PESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDA----ACDIWSLGVLLY 211
Query: 267 TF 268
T
Sbjct: 212 TM 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTE-------IK 126
V+G+G F V + E TG AVK ++ TE I
Sbjct: 30 EVIGKGAFSVVRRCINRE---------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
H+ L HP++V+L+ D +V+EFM L + +RA S +
Sbjct: 81 HM--LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVM 243
+ L Y H + +I+RD K N+LL N+ KL DFG+A G V+ +
Sbjct: 139 ILEALRYCHDN--NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRV 194
Query: 244 GTYGYAAPEYM 254
GT + APE +
Sbjct: 195 GTPHFMAPEVV 205
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 188 ----YRAPELI 194
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 24 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 130
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 131 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 182
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 183 ---WYRAPEIM 190
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DFGLA+ V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLTEIKHLGQLYH 133
+G+G F V + + TG A K +N + L + H + E + L H
Sbjct: 12 IGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQP-LSWTIRMKVALGAAKGLA 192
N+V+L E+ LV++ + G L + R Y + S I+ + A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-------A 115
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKD---------GPTGSQSHVST 240
LH + V++RD K N+LL KL+DFGLA + G G+ ++S
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 241 RVMGTYGYAAP-EYMATGIFQLVLLL 265
V+ Y P + A G+ +LL+
Sbjct: 176 EVLRKEAYGKPVDIWACGVILYILLV 201
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
++ +G G +G V + GT + A K++ + ++ + EI+ + L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN+++L ++ LV E G LF R + + + ++ +A
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 193 YLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLA---KDG-----PTGSQSHVSTR 241
Y H K V +RD K N L + KL DFGLA K G G+ +VS +
Sbjct: 138 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 242 VM-GTYGYAAPEYMATGIFQLVLL 264
V+ G YG E+ A G+ VLL
Sbjct: 196 VLEGLYGPECDEWSA-GVMMYVLL 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 73 DSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY 132
++ +G G +G V + GT + A K++ + ++ + EI+ + L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN+++L ++ LV E G LF R + + + ++ +A
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 193 YLHSDKAKVIYRDFKTSNILL---DLNYNAKLSDFGLA---KDG-----PTGSQSHVSTR 241
Y H K V +RD K N L + KL DFGLA K G G+ +VS +
Sbjct: 121 YCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 242 VM-GTYGYAAPEYMATGIFQLVLL 264
V+ G YG E+ A G+ VLL
Sbjct: 179 VLEGLYGPECDEWSA-GVMMYVLL 201
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 100 GTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T M AVK +++ S + E + + GQ HPN++ L + H LV E M G
Sbjct: 50 ATNMEYAVKVIDK-SKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGG 106
Query: 160 SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNIL-LDLNYN 218
L + + R+ + + + + + K + YLHS V++RD K SNIL +D + N
Sbjct: 107 ELLDKILRQKFFSEREASFVLHTI----GKTVEYLHSQ--GVVHRDLKPSNILYVDESGN 160
Query: 219 A---KLSDFGLAKD---------GPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLF 266
++ DFG AK P + + V+ V+ GY I+ L +LL+
Sbjct: 161 PECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDE----GCDIWSLGILLY 216
Query: 267 TF 268
T
Sbjct: 217 TM 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ FGLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 38/193 (19%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLED-DHRLLVYEFMPKGSLENHLFR----RASYIQPLSWTIRM 181
H N++ L+ LE+ + LV M G+ N++ + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQI-- 134
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTR 241
+GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 135 ------LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR 186
Query: 242 VMGTYGYAAPEYM 254
Y APE M
Sbjct: 187 -----WYRAPEIM 194
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVK----RLNQESLQG--HLEWLTEIKHLG 129
LG G F V K TG+ A K R ++ S +G E E+ L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 130 QLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAK 189
Q+ HPN++ L +L+ E + G L + L ++ S + + + ++
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LD 126
Query: 190 GLAYLHSDKAKVIYRDFKTSNI-LLDLNY---NAKLSDFGLAKDGPTGSQSHVSTRVMGT 245
G+ YLH+ K+ + D K NI LLD N + KL DFGLA + G + + GT
Sbjct: 127 GVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGT 181
Query: 246 YGYAAPEYM 254
+ APE +
Sbjct: 182 PEFVAPEIV 190
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 159
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 160 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 207
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQG E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 185
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKR-LNQESLQGHLEWLTEIKH 127
+R +LG+GGFG VF G H VI R L L + E+
Sbjct: 32 EYRLGPLLGKGGFGTVFAG----HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 128 LGQLY----HPNLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMK 182
L ++ HP +++L+ + + +LV E +P L +++ + + S +
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN-AKLSDFGLAKDGPTGSQSHVS-- 239
V A H V++RD K NIL+DL AKL DFG +G+ H
Sbjct: 148 VVA------AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDEPY 195
Query: 240 TRVMGTYGYAAPEYMA--------TGIFQLVLLLFTFECSLLHFS 276
T GT Y+ PE+++ ++ L +LL+ C + F
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 139
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 140 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 187
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 153
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 154 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 201
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 139
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 140 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 187
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 140
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 141 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 188
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 172
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 173 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 220
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG+ +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ D GLA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 152
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 153 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 200
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 167
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 168 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 215
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 62 GLKTA-TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLE 120
G+K+ T F +G G FG VFK + G + A+KR +++ L G ++
Sbjct: 4 GMKSRYTTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVD 53
Query: 121 WLTEIKH------LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRRASY 171
++ LGQ H ++V+ EDDH L+ E+ GSL + + +R SY
Sbjct: 54 EQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 172 IQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILL 213
+ + L +GL Y+HS +++ D K SNI +
Sbjct: 112 FKEAELK---DLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 148
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 63 LKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--- 119
++ R+ +P +G G +G V +D T G +A+K+L + Q L
Sbjct: 23 VRAVYRDLQP---VGSGAYGAVCSA-VDGRT--------GAKVAIKKLYR-PFQSELFAK 69
Query: 120 EWLTEIKHLGQLYHPNLVKLIGYCLEDD------HRLLVYEFMPK--GSLENHLFRRASY 171
E++ L + H N++ L+ D+ LV FM G L H
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 172 IQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGP 231
IQ L + + KGL Y+H+ A +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 130 IQFLVYQM--------LKGLRYIHA--AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 232 TGSQSHVSTRVMGTYGYAAPEYM 254
+ V TR Y APE +
Sbjct: 180 SEMXGXVVTR-----WYRAPEVI 197
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 167
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 168 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 215
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 124
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 125 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 172
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 125
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 126 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 173
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 123
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 124 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 171
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 147
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 148 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 195
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
T F +G G FG VFK + G + A+KR +++ L G ++ ++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 57
Query: 127 H------LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRRASYIQPLSW 177
LGQ H ++V+ EDDH L+ E+ GSL + + +R SY +
Sbjct: 58 EVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILL 213
+ L +GL Y+HS +++ D K SNI +
Sbjct: 116 K---DLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 40/180 (22%)
Query: 69 NFRPDSVLGEGGFGCVFKGW--IDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVM 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS---------- 176
L L H +V+ LE R + M ++ LF + Y + +
Sbjct: 55 LLASLNHQYVVRYYAAWLE---RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL 111
Query: 177 -------WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
W + ++ + L+Y+HS +I+RD K NI +D + N K+ DFGLAK+
Sbjct: 112 NQQRDEYWRLFRQIL----EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 165
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 166 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 221
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 222 ----YRAPELI 228
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
T F +G G FG VFK + G + A+KR +++ L G ++ ++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 57
Query: 127 H------LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRRASYIQPLSW 177
LGQ H ++V+ EDDH L+ E+ GSL + + +R SY +
Sbjct: 58 EVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILL 213
+ L +GL Y+HS +++ D K SNI +
Sbjct: 116 K---DLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 67 TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
T F +G G FG VFK + G + A+KR +++ L G ++ ++
Sbjct: 6 TTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKR-SKKPLAGSVDEQNALR 55
Query: 127 H------LGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL---FRRASYIQPLSW 177
LGQ H ++V+ EDDH L+ E+ GSL + + +R SY +
Sbjct: 56 EVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILL 213
+ L +GL Y+HS +++ D K SNI +
Sbjct: 114 K---DLLLQVGRGLRYIHS--MSLVHMDIKPSNIFI 144
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 159
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 160 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 215
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 216 ----YRAPELI 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 169
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 170 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 225
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 226 ----YRAPELI 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 167
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 168 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 224 ----YRAPELI 230
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ--GHLEWLTEIKHLGQLY 132
+LG GGFG V+ G R + +A+K + ++ + G L T + L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 133 HP------NLVKLIGYCLEDDHRLLVYEF-MPKGSLENHLFRRASYIQPLSWTIRMKVAL 185
+++L+ + D +L+ E P L + + R + + L+ + +V L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-L 120
Query: 186 GAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTR 241
A + H V++RD K NIL+DLN KL DFG L KD V T
Sbjct: 121 EAVR-----HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTD 168
Query: 242 VMGTYGYAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
GT Y+ PE++ + ++ L +LL+ C + F
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 136
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 137 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 192
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 193 ----YRAPELI 199
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 210
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 211 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 266
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 267 ----YRAPELI 273
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ LQ E++ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 165
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS +
Sbjct: 166 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-ICSR 220
Query: 246 YGYAAPEYM 254
Y Y APE +
Sbjct: 221 Y-YRAPELI 228
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG VF+ + E +A+K++ Q+ + E++ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESDE----------VAIKKVLQDKRFKN----RELQIMRIVKHP 92
Query: 135 NLVKLIGYCLEDDHRL------LVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV----A 184
N+V L + + + LV E++P+ ++R + + L T+ M +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYM 147
Query: 185 LGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVM 243
+ LAY+HS + +RD K N+LLD KL DFG AK G + +VS +
Sbjct: 148 YQLLRSLAYIHS--IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSX-IC 203
Query: 244 GTYGYAAPEYM 254
Y Y APE +
Sbjct: 204 SRY-YRAPELI 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 86
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 144
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 145 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 200
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 201 ----YRAPELI 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQ--SHVSTRVM 243
+ LAY+HS + +RD K N+LLD + KL DFG AK G S++ +R
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 244 GTYGYAAPEYM 254
Y APE +
Sbjct: 188 ----YRAPELI 194
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIKHLGQL 131
S +G G +G V + TG +AVK+L++ +S+ E++ L +
Sbjct: 28 SPVGSGAYGSVCAAF---------DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 132 YHPNLVKLI-----GYCLEDDHRLLVYEFMPKGSLENHLFRRA---SYIQPLSWTIRMKV 183
H N++ L+ LE+ + + + + L N + + ++Q L + I
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI---- 134
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVM 243
+GL Y+HS A +I+RD K SN+ ++ + K+ DF LA+ +V+TR
Sbjct: 135 ----LRGLKYIHS--ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-- 186
Query: 244 GTYGYAAPEYM 254
Y APE M
Sbjct: 187 ---WYRAPEIM 194
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLTEIKHLGQLYH 133
LG+G F V + + TG A K +N + L + H + E + L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PN+V+L E+ LV++ + G L + R Y + + ++ + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----LESVNH 118
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
H + +++RD K N+LL KL+DFGLA + Q+ GT GY +
Sbjct: 119 CHLN--GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 251 PEYM 254
PE +
Sbjct: 175 PEVL 178
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL--QGHLEWLTEIKHLGQLYH 133
LG+G F V + + TG A K +N + L + H + E + L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 134 PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAY 193
PN+V+L E+ LV++ + G L + R Y + + ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 194 LHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
H +++RD K N+LL KL+DFGLA + Q+ GT GY +
Sbjct: 118 -HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 251 PEYM 254
PE +
Sbjct: 175 PEVL 178
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 185
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 85
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 143
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 144 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 197
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 198 RYYRAPELI 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 85
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 143
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS +
Sbjct: 144 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-ICSR 198
Query: 246 YGYAAPEYM 254
Y Y APE +
Sbjct: 199 Y-YRAPELI 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 92
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 150
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 151 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 204
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 205 RYYRAPELI 213
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 77
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 135
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 136 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 189
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 190 RYYRAPELI 198
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 81
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 139
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 140 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 193
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 194 RYYRAPELI 202
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 74
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 132
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 133 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 186
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 187 RYYRAPELI 195
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKL------IGYCLEDDHRLLVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L G ++ + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 185
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 53/210 (25%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G G +AVKR+ + L EIK L +
Sbjct: 20 EKILGYGSSGTVVFQGSF-----------QGRPVAVKRMLIDFCDIAL---MEIKLLTES 65
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRRASYIQPLSWTIR 180
HPN+++ YC E R L + + + ++ + + P+S +
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGLA 227
+ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 124 I------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 228 KDGPTGSQSHVSTRV---MGTYGYAAPEYM 254
K +G QS T + GT G+ APE +
Sbjct: 176 KKLDSG-QSSFRTNLNNPSGTSGWRAPELL 204
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI + L HPN+V+ L H ++ E+ G L + + + + ++
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS--DFGLAKDGPTGSQSHVSTR 241
G++Y HS ++ +RD K N LLD + +L DFG +K SQ +
Sbjct: 126 ----LSGVSYCHS--MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 177
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 178 -VGTPAYIAPEVL 189
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + + T + T Y
Sbjct: 136 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYR 190
Query: 250 APEYM 254
APE +
Sbjct: 191 APEVI 195
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 54/218 (24%)
Query: 69 NFRPDSVLGEGGFGCVFKGW--IDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F +VLG+G FG V K +D YA I R +E L L+E+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYA---------IKKIRHTEEKLST---ILSEVX 54
Query: 127 HLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLS---------- 176
L L H +V+ LE + + + K S LF + Y + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKST---LFIQXEYCENRTLYDLIHSENL 111
Query: 177 -------WTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
W + ++ + L+Y+HS +I+R+ K NI +D + N K+ DFGLAK+
Sbjct: 112 NQQRDEYWRLFRQIL----EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 230 -------------GPTGSQSHVSTRVMGTYGYAAPEYM 254
GS ++ T +GT Y A E +
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNL-TSAIGTAXYVATEVL 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
Y +P++ + + A+G+ +L S K I+RD NILL N K+ DFGLA+D
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLSS--RKCIHRDLAARNILLSENNVVKICDFGLARD 248
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWL-TEIKHLGQL-YH 133
LG G FG V + + + T +AVK L + + + L TE+K L + +H
Sbjct: 35 LGRGAFGKVVQA----SAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 134 PNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHL 165
N+V L+G C + L+V E+ G+L N+L
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 75 VLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHP 134
V+G G FG V++ + + +G ++A+K++ Q+ + E++ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKVLQDKRFKN----RELQIMRKLDHC 73
Query: 135 NLVKLIGYCLEDDHRL------LVYEFMPKG--SLENHLFRRASYIQPLSWTIRMKVALG 186
N+V+L + + LV +++P+ + H + RA P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL- 131
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGT 245
+ LAY+HS + +RD K N+LLD + KL DFG AK G + +VS + +
Sbjct: 132 -FRSLAYIHS--FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX--ICS 185
Query: 246 YGYAAPEYM 254
Y APE +
Sbjct: 186 RYYRAPELI 194
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 137 VKLIGYCLEDDHRL-LVYEFMPKGSLENHLFR---RASYIQPLSWTIRMKVALGAAKGLA 192
+ + Y +DD+ L LV ++ G L L + R + M +A+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 193 YLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGY 248
Y+H RD K NIL+D+N + +L+DFG L +DG QS V+ +GT Y
Sbjct: 196 YVH--------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--QSSVA---VGTPDY 242
Query: 249 AAPEYM 254
+PE +
Sbjct: 243 ISPEIL 248
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 104 VIAVKRLNQ-ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE 162
++AVK + + E + +++ EI + L HPN+V+ L H +V E+ G
Sbjct: 46 LVAVKYIERGEKIAANVK--REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE-- 101
Query: 163 NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
LF R S G++Y H+ +V +RD K N LLD + +L
Sbjct: 102 --LFERICNAGRFSEDEARFFFQQLISGVSYCHA--MQVCHRDLKLENTLLDGSPAPRLK 157
Query: 223 --DFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
DFG +K SQ + +GT Y APE +
Sbjct: 158 ICDFGYSKSSVLHSQPKST---VGTPAYIAPEVL 188
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 250 APEYM 254
APE +
Sbjct: 186 APEVI 190
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NIL+ K+ DFG+A+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Query: 233 GSQSHVSTRVMGTYGYAAPEY-------MATGIFQLVLLLFTFECSLLHFSLQLPMCVLY 285
G+ + V+GT Y +PE + ++ L +L+ F+ P+ V Y
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI + L HPN+V+ L H +V E+ G LF R S
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 119
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS--DFGLAKDGPTGSQSHVSTR 241
G++Y H+ +V +RD K N LLD + +L DFG +K SQ +
Sbjct: 120 FQQLISGVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 175
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 176 -VGTPAYIAPEVL 187
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 143 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 197
Query: 250 APEYM 254
APE +
Sbjct: 198 APEVI 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 250 APEYM 254
APE +
Sbjct: 187 APEVI 191
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 131 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 185
Query: 250 APEYM 254
APE +
Sbjct: 186 APEVI 190
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 250 APEYM 254
APE +
Sbjct: 187 APEVI 191
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 132 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 250 APEYM 254
APE +
Sbjct: 187 APEVI 191
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 250 APEYM 254
APE +
Sbjct: 194 APEVI 198
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 250 APEYM 254
APE +
Sbjct: 194 APEVI 198
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 139 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 193
Query: 250 APEYM 254
APE +
Sbjct: 194 APEVI 198
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 137 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 191
Query: 250 APEYM 254
APE +
Sbjct: 192 APEVI 196
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 104 VIAVKRLNQ--ESLQGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMP 157
V+A+K++ + E L L EI L +L H ++VK++ + D L V +
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
+ LFR Y+ L + L G+ Y+HS A +++RD K +N L++ +
Sbjct: 140 DSDFKK-LFRTPVYLTELHIKTLLYNLLV---GVKYVHS--AGILHRDLKPANCLVNQDC 193
Query: 218 NAKLSDFGLAK--DGPTGSQSHV 238
+ K+ DFGLA+ D P S +
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQL 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 250 APEYM 254
APE +
Sbjct: 231 APEVI 235
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
KGL Y+HS A V++RD K N+ ++ + K+ DFGLA+ +V TR Y
Sbjct: 155 KGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 207
Query: 249 AAPEYM 254
APE +
Sbjct: 208 RAPEVI 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + T + T Y
Sbjct: 176 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 230
Query: 250 APEYM 254
APE +
Sbjct: 231 APEVI 235
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI + L HPN+V+ L H +V E+ G L + + + + ++
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN--YNAKLSDFGLAKDGPTGSQSHVSTR 241
G++Y H+ +V +RD K N LLD + K++DFG +K SQ +
Sbjct: 125 ----ISGVSYAHA--MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-- 176
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 177 -VGTPAYIAPEVL 188
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 78/195 (40%), Gaps = 47/195 (24%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL---EWLTEIKHLGQLY 132
+G G +G V ID+ + G +A+K+L++ Q + E+ L +
Sbjct: 32 VGSGAYGSVCSA-IDKRS--------GEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV--------- 183
H N++ L+ F P SL N F + P T K+
Sbjct: 82 HENVIGLLDV------------FTPASSLRN--FYDFYLVMPFMQTDLQKIMGLKFSEEK 127
Query: 184 ----ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVS 239
KGL Y+HS A V++RD K N+ ++ + K+ DFGLA+ +V
Sbjct: 128 IQYLVYQMLKGLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV 185
Query: 240 TRVMGTYGYAAPEYM 254
TR Y APE +
Sbjct: 186 TR-----WYRAPEVI 195
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 74 SVLGEGG----FGCVFKGWIDEHTYAPAR-PGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
S L EGG + KG+ D T AR TG + V+R+N E+ + +L H
Sbjct: 19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 78
Query: 128 LGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L+ HPN+V + D+ +V FM GS ++ + ++ ++ + G
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC--THFMDGMNELAIAYILQG 136
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
K L Y+H ++R K S+IL+ ++ LS
Sbjct: 137 VLKALDYIH--HMGYVHRSVKASHILISVDGKVYLS 170
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 74 SVLGEGG----FGCVFKGWIDEHTYAPAR-PGTGMVIAVKRLNQESLQGHL-EWLTEIKH 127
S L EGG + KG+ D T AR TG + V+R+N E+ + +L H
Sbjct: 3 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELH 62
Query: 128 LGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALG 186
+ +L+ HPN+V + D+ +V FM GS ++ + ++ ++ + G
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC--THFMDGMNELAIAYILQG 120
Query: 187 AAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS 222
K L Y+H ++R K S+IL+ ++ LS
Sbjct: 121 VLKALDYIH--HMGYVHRSVKASHILISVDGKVYLS 154
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 133 HPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLA 192
HPN++ L + + +V E G L + + R+ + + + + + K +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTIT----KTVE 130
Query: 193 YLHSDKAKVIYRDFKTSNIL-LDLNYNA---KLSDFGLAKD---------GPTGSQSHVS 239
YLH+ V++RD K SNIL +D + N ++ DFG AK P + + V+
Sbjct: 131 YLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 240 TRVMGTYGYAAPEYMATGIFQLVLLLFT 267
V+ GY A A I+ L +LL+T
Sbjct: 189 PEVLERQGYDA----ACDIWSLGVLLYT 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NI++ K+ DFG+A+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 233 GSQSHVSTRVMGTYGYAAPEY-------MATGIFQLVLLLFTFECSLLHFSLQLPMCVLY 285
G+ + V+GT Y +PE + ++ L +L+ F+ P+ V Y
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NI++ K+ DFG+A+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 233 GSQSHVSTRVMGTYGYAAPEY-------MATGIFQLVLLLFTFECSLLHFSLQLPMCVLY 285
G+ + V+GT Y +PE + ++ L +L+ F+ P+ V Y
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NI++ K+ DFG+A+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 233 GSQSHVSTRVMGTYGYAAPEY-------MATGIFQLVLLLFTFECSLLHFSLQLPMCVLY 285
G+ + V+GT Y +PE + ++ L +L+ F+ P+ V Y
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T + + T + T Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYYR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 122 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 171
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 172 MRT-LCGTPTYLAPEVLVS 189
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 123 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 173 MRT-LCGTPTYLAPEVLVS 190
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 123 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 173 MRT-LCGTPTYLAPEVLVS 190
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 123 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 172
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 173 MRT-LCGTPTYLAPEVLVS 190
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 192 AYLHSDKAKVIYRDFKTSNILLDLNYNA-KLSDFG---LAKDGPTGSQSHVSTRVMGTYG 247
A H V++RD K NIL+DLN KL DFG L KD V T GT
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRV 221
Query: 248 YAAPEYM--------ATGIFQLVLLLFTFECSLLHFS 276
Y+ PE++ + ++ L +LL+ C + F
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 129 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 178
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 179 MRT-LCGTPTYLAPEVLVS 196
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NI++ K+ DFG+A+ +
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 233 GSQSHVSTRVMGTYGYAAPEY-------MATGIFQLVLLLFTFECSLLHFSLQLPMCVLY 285
G+ + V+GT Y +PE + ++ L +L+ F+ P+ V Y
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 13/169 (7%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQE-SLQGHL 119
+ + P LG G +G V ++ + P +G + AVKR+ + Q
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVV-----EKXRHVP----SGQIXAVKRIRATVNSQEQK 77
Query: 120 EWLTEIKHLGQLYH-PNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
L ++ + P V G + + E + SL+ + Q +
Sbjct: 78 RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPED 136
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
I K+A+ K L +LHS K VI+RD K SN+L++ K DFG++
Sbjct: 137 ILGKIAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ T S + + T Y
Sbjct: 140 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYR 194
Query: 250 APEYM 254
APE +
Sbjct: 195 APEVI 199
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 262 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 311
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 312 MRT-LCGTPTYLAPEVLVS 329
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLF--RRASYIQPLSWTIR 180
TEI+ L +L HP ++K+ + +D+ +V E M G L + + +R + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN---AKLSDFGLAKDGPTGSQSH 237
M +A + YLH + +I+RD K N+LL K++DFG +K G S
Sbjct: 248 MLLA------VQYLHEN--GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSL 297
Query: 238 VSTRVMGTYGYAAPEYMAT 256
+ T + GT Y APE + +
Sbjct: 298 MRT-LCGTPTYLAPEVLVS 315
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWID-EHTYAPARPGTGMVIAVKR--LNQESLQG 117
NG K R + DS++G+G FG V K + E + + +I K+ LNQ ++
Sbjct: 29 NGEKWMDR-YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEV 82
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
L L KH ++ + +V L + + +H LV+E + S + R + + +S
Sbjct: 83 RLLELMN-KHDTEMKY-YIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSL 137
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
+ K A L +L + + +I+ D K NILL N K S + G +
Sbjct: 138 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQ 194
Query: 238 VSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLPM 281
+ + + Y +PE + + L + +++ C L+ P+
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ G+ + V+ Y Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 190 GLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYA 249
G+ +LHS A +I+RD K SNI++ + K+ DFGLA+ G+ + V+ Y Y
Sbjct: 138 GIKHLHS--AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 250 APEYM 254
APE +
Sbjct: 193 APEVI 197
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWID-EHTYAPARPGTGMVIAVKR--LNQESLQG 117
NG K R + DS++G+G FG V K + E + + +I K+ LNQ ++
Sbjct: 48 NGEKWMDR-YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEV 101
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
L L KH ++ + +V L + + +H LV+E + S + R + + +S
Sbjct: 102 RLLELMN-KHDTEMKY-YIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSL 156
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSH 237
+ K A L +L + + +I+ D K NILL N K S + G +
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQ 213
Query: 238 VSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLPM 281
+ + + Y +PE + + L + +++ C L+ P+
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 174 PLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD-GPT 232
P++ ++V A + L + H + +I+RD K +NI++ K+ DFG+A+ +
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 233 GSQSHVSTRVMGTYGYAAPE 252
G+ + V+GT Y +PE
Sbjct: 170 GNSVTQTAAVIGTAQYLSPE 189
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G G +AVKR+ + L EIK L +
Sbjct: 38 EKILGYGSSGTVVFQGSF-----------QGRPVAVKRMLIDFCDIAL---MEIKLLTES 83
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRRASYIQPLSWTIR 180
HPN+++ YC E R L + + + ++ + + P+S +
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGLA 227
+ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 142 I------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 228 KDGPTGSQSHVS--TRVMGTYGYAAPEYM 254
K +G GT G+ APE +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 40/219 (18%)
Query: 57 SFSFNGLKTATR--NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQES 114
S + +G +R + +P LG GG G VF ++ +A+K++
Sbjct: 1 SMNIHGFDLGSRYMDLKP---LGCGGNGLVFSAVDND---------CDKRVAIKKIVLTD 48
Query: 115 LQGHLEWLTEIKHLGQLYHPNLVKL--------------IGYCLEDDHRLLVYEFMPKGS 160
Q L EIK + +L H N+VK+ +G E + +V E+M +
Sbjct: 49 PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETD 107
Query: 161 LENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-NYNA 219
L N L + PL +GL Y+HS A V++RD K +N+ ++ +
Sbjct: 108 LANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANLFINTEDLVL 160
Query: 220 KLSDFGLAK--DGPTGSQSHVSTRVMGTYGYAAPEYMAT 256
K+ DFGLA+ D + H+S ++ T Y +P + +
Sbjct: 161 KIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLS 198
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G G +AVKR+ + L EIK L +
Sbjct: 38 EKILGYGSSGTVVFQGSF-----------QGRPVAVKRMLIDFCDIAL---MEIKLLTES 83
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRRASYIQPLSWTIR 180
HPN+++ YC E R L + + + ++ + + P+S +
Sbjct: 84 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGLA 227
+ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 142 I------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 228 KDGPTGSQSHVS--TRVMGTYGYAAPEYM 254
K +G GT G+ APE +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELL 222
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 51/209 (24%)
Query: 73 DSVLGEGGFG-CVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQL 131
+ +LG G G VF+G G +AVKR+ + L EIK L +
Sbjct: 20 EKILGYGSSGTVVFQGSF-----------QGRPVAVKRMLIDFCDIAL---MEIKLLTES 65
Query: 132 Y-HPNLVKLIGYCLEDDHRLL----------VYEFMPKGSLENHLFRRASYIQPLSWTIR 180
HPN+++ YC E R L + + + ++ + + P+S +
Sbjct: 66 DDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 181 MKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDL-------------NYNAKLSDFGLA 227
+ A G+A+LHS K+I+RD K NIL+ N +SDFGL
Sbjct: 124 I------ASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 228 KDGPTGSQSHVS--TRVMGTYGYAAPEYM 254
K +G GT G+ APE +
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY-HPNLVKLIGYCLEDDHRL-LVYEFMPK 158
G AVK + +++ E++ L Q + N+++LI + EDD R LV+E +
Sbjct: 37 NGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF-FEDDTRFYLVFEKLQG 95
Query: 159 GSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 218
GS+ H+ ++ + + + +V A L +LH+ + +RD K NIL +
Sbjct: 96 GSILAHIQKQKHFNEREA----SRVVRDVAAALDFLHT--KGIAHRDLKPENILCESPEK 149
Query: 219 ---AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTF 268
K+ DF L + T T + EYMA + ++ TF
Sbjct: 150 VSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF 202
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-----------EWLTE 124
+ G +G V G E G+ +A+KR+ G L E
Sbjct: 30 ISSGSYGAVCAGVDSE----------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 125 IKHLGQLYHPNLVKL--IGYCLEDD--HRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
I+ L +HPN++ L I E+ H+L LV E M + L + + I P
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY 138
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHV 238
M L GL LH +A V++RD NILL N + + DF LA+ D +++H
Sbjct: 139 FMYHIL---LGLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 239 STRVMGTYGYAAPE 252
T Y APE
Sbjct: 194 VTH----RWYRAPE 203
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL-----------EWLTE 124
+ G +G V G E G+ +A+KR+ G L E
Sbjct: 30 ISSGSYGAVCAGVDSE----------GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79
Query: 125 IKHLGQLYHPNLVKL--IGYCLEDD--HRL-LVYEFMPKGSLENHLFRRASYIQPLSWTI 179
I+ L +HPN++ L I E+ H+L LV E M + L + + I P
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY 138
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAK-DGPTGSQSHV 238
M L GL LH +A V++RD NILL N + + DF LA+ D +++H
Sbjct: 139 FMYHIL---LGLHVLH--EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 239 STRVMGTYGYAAPE 252
T Y APE
Sbjct: 194 VTH----RWYRAPE 203
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 158 KGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNY 217
K +L++ + RR S ++ + + + + A+ + +LHS +++RD K SNI ++
Sbjct: 145 KENLKDWMNRRCS-LEDREHGVCLHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDD 201
Query: 218 NAKLSDFGL--AKDGPTGSQSHVSTR--------VMGTYGYAAPEYM-------ATGIFQ 260
K+ DFGL A D Q+ ++ +GT Y +PE + IF
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 261 LVLLLFTFECSLLHFSLQL 279
L L+LF L FS Q+
Sbjct: 262 LGLILFEL---LYSFSTQM 277
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 69 NFRPDSVLGEGGFGCVF--KGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIK 126
+F P +G GGFG VF K +D+ YA R + + + L +E + + E+K
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKR----IRLPNRELAREKV------MREVK 56
Query: 127 HLGQLYHPNLVKLIGYCLE 145
L +L HP +V+ LE
Sbjct: 57 ALAKLEHPGIVRYFNAWLE 75
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HP++V+L+ D +V+EFM L + +RA S + +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGTYG 247
L Y H + +I+RD K +LL N+ KL FG+A G V+ +GT
Sbjct: 145 LRYCHDN--NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPH 200
Query: 248 YAAPEYM 254
+ APE +
Sbjct: 201 FMAPEVV 207
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKG 190
L HP++V+L+ D +V+EFM L + +RA S + +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNA---KLSDFGLAKDGPTGSQSHVSTRVMGTYG 247
L Y H + +I+RD K +LL N+ KL FG+A G V+ +GT
Sbjct: 143 LRYCHDN--NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPH 198
Query: 248 YAAPEYM 254
+ APE +
Sbjct: 199 FMAPEVV 205
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 60 FNGLKTA--TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESL 115
F G+K N+ ++G G +G V+ + T +A+K++N+ E L
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDL 66
Query: 116 QGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDD-----HRLLVYEFMP---KGSLENHLFR 167
L EI L +L +++L + DD +V E K + +F
Sbjct: 67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFL 126
Query: 168 RASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLA 227
+I+ + + + + G ++H ++ +I+RD K +N LL+ + + K+ DFGLA
Sbjct: 127 TEEHIKTILYNLLL--------GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
Query: 228 K 228
+
Sbjct: 177 R 177
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI + L HPN+V+ L H +V E+ G LF R S
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS--DFGLAKDGPTGSQSHVSTR 241
G++Y H+ +V +RD K N LLD + +L FG +K SQ +
Sbjct: 121 FQQLISGVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-- 176
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 177 -VGTPAYIAPEVL 188
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 27/229 (11%)
Query: 61 NGLKTATRNFRPDSVLGEGGFGCVFKGWID-EHTYAPARPGTGMVIAVKR--LNQESLQG 117
NG K R + DS++G+G FG V K + E + + +I K+ LNQ ++
Sbjct: 48 NGEKWMDR-YEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEV 101
Query: 118 HLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSW 177
L L KH ++ + +V L + + +H LV+E + S + R + + +S
Sbjct: 102 RLLELMN-KHDTEMKY-YIVHLKRHFMFRNHLCLVFEML---SYNLYDLLRNTNFRGVSL 156
Query: 178 TIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILL--DLNYNAKLSDFGLAKDGPTGSQ 235
+ K A L +L + + +I+ D K NILL K+ DF GS
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDF--------GSS 208
Query: 236 SHVSTRV---MGTYGYAAPEYMATGIFQLVLLLFTFECSLLHFSLQLPM 281
+ R+ + + Y +PE + + L + +++ C L+ P+
Sbjct: 209 CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 124 EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKV 183
EI + L HPN+V+ L H +V E+ G LF R S
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFF 120
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLS--DFGLAKDGPTGSQSHVSTR 241
G++Y H+ +V +RD K N LLD + +L FG +K SQ
Sbjct: 121 FQQLISGVSYCHA--MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ---PKD 175
Query: 242 VMGTYGYAAPEYM 254
+GT Y APE +
Sbjct: 176 TVGTPAYIAPEVL 188
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG--LAKDGPTGSQSH 237
M +A+ + L Y+H RD K N+LLD+N + +L+DFG L + QS
Sbjct: 183 EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 234
Query: 238 VSTRVMGTYGYAAPEYM 254
V+ +GT Y +PE +
Sbjct: 235 VA---VGTPDYISPEIL 248
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 123 TEIKHLGQLYHPNLVKLIGYCLEDD----HRLLVYEFMPKGSLENHLFRRASYIQPLSWT 178
TEI + H N++ I ++ L+ ++ GSL ++L +++ + S
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKS-- 135
Query: 179 IRMKVALGAAKGLAYLHSD------KAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPT 232
+K+A + GL +LH++ K + +RD K+ NIL+ N ++D GLA +
Sbjct: 136 -MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 233 GSQS---HVSTRVMGTYGYAAPEYM 254
+ +TRV GT Y PE +
Sbjct: 195 DTNEVDIPPNTRV-GTKRYMPPEVL 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 180 RMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFG--LAKDGPTGSQSH 237
M +A+ + L Y+H RD K N+LLD+N + +L+DFG L + QS
Sbjct: 199 EMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 250
Query: 238 VSTRVMGTYGYAAPEYM 254
V+ +GT Y +PE +
Sbjct: 251 VA---VGTPDYISPEIL 264
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 68 RNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKH 127
++F+ S LG G +G VFK E G + AVKR + +G + ++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKE---------DGRLYAVKR-SMSPFRGPKDRARKLAE 106
Query: 128 LGQL----YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHLFR-RASYIQPLSWTIRMK 182
+G HP V+L E+ L + + SL+ H AS + W
Sbjct: 107 VGSHEKVGQHPCCVRLE-QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 183 VALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRV 242
L LA+LHS +++ D K +NI L KL DFGL + T V
Sbjct: 166 TLLA----LAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-- 217
Query: 243 MGTYGYAAPEYM------ATGIFQLVLLLFTFECSL 272
G Y APE + A +F L L + C++
Sbjct: 218 -GDPRYMAPELLQGSYGTAADVFSLGLTILEVACNM 252
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 199 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 242
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 30 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 83
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP 174
+H N+V L+G C + L+V EF G+L +L + + P
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 24/198 (12%)
Query: 60 FNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL 119
F + R + +G GG VF+ + A+K +N E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ----------VLNEKKQIYAIKYVNLEEADNQT 69
Query: 120 --EWLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE-NHLFRRASYIQP 174
+ EI +L +L + +++L Y + D + +Y M G+++ N ++ I P
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDP 126
Query: 175 LSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGS 234
K L A + + +++ D K +N L+ ++ KL DFG+A +
Sbjct: 127 WERKSYWKNMLEAVHTIH-----QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT 180
Query: 235 QSHVSTRVMGTYGYAAPE 252
S V +GT Y PE
Sbjct: 181 TSVVKDSQVGTVNYMPPE 198
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 197 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 240
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 81
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP 174
+H N+V L+G C + L+V EF G+L +L + + P
Sbjct: 82 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 125
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 204 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 247
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 88
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP 174
+H N+V L+G C + L+V EF G+L +L + + P
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 184 ALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKD 229
+ AKG+ +L S K I+RD NILL K+ DFGLA+D
Sbjct: 206 SFQVAKGMEFLAS--RKCIHRDLAARNILLSEKNVVKICDFGLARD 249
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQG-HLEWLTEIK---HLGQL 131
LG G FG V I+ + + T +AVK L + + H ++E+K H+G
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 90
Query: 132 YHPNLVKLIGYCLEDDHRLLV-YEFMPKGSLENHLFRRASYIQP 174
+H N+V L+G C + L+V EF G+L +L + + P
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G F +FKG E T +++ V L++ + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV G C+ D +LV EF+ GSL+ +L + + I L W +++VA A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLE 130
Query: 196 SDKAKVIYRDFKTSNILL 213
+ +I+ + NILL
Sbjct: 131 EN--TLIHGNVCAKNILL 146
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 81/193 (41%), Gaps = 29/193 (15%)
Query: 69 NFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQ--ESLQGHLEWLTEIK 126
N+ ++G G +G V+ + +A+K++N+ E L L EI
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY---------DKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 127 HLGQLYHPNLVKLIGYCL-ED----DHRLLVYEFMP---KGSLENHLFRRASYIQPLSWT 178
L +L +++L + ED D +V E K + +F +++ + +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 179 IRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHV 238
+ + G ++H ++ +I+RD K +N LL+ + + K+ DFGLA+ + H+
Sbjct: 140 LLL--------GEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
Query: 239 STRVMGTYGYAAP 251
+ P
Sbjct: 190 VNDLEEKEENEEP 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 56/226 (24%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQ----GHLEWL-TEIKHLGQ 130
+G+G +G V + I+ T A + A+K +N+ ++ +E + TE++ + +
Sbjct: 34 IGQGSYG-VVRVAIENQTRA--------IRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84
Query: 131 LYHPNLVKLIGYCLEDDHRLLVYEFMPKGSLENHL--FRRAS------------------ 170
L+HPN+ +L ++ + LV E G L + L F S
Sbjct: 85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 171 ------------YIQPLSWTIRMKVALGAAK----GLAYLHSDKAKVIYRDFKTSNILLD 214
+ + L + R K+ + L YLH+ + +RD K N L
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ--GICHRDIKPENFLFS 202
Query: 215 LN--YNAKLSDFGLAKD--GPTGSQSHVSTRVMGTYGYAAPEYMAT 256
N + KL DFGL+K+ + + T GT + APE + T
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T AVK + ++ E++ L Q H N+++LI + E+D LV+E M G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 160 SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN- 218
S+ +H+ +R + + L ++ V A L +LH+ + +RD K NIL +
Sbjct: 97 SILSHIHKRRHFNE-LEASV---VVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQV 150
Query: 219 --AKLSDFGLAKDGP-TGSQSHVSTRVM----GTYGYAAPEYM 254
K+ DFGL G S +ST + G+ Y APE +
Sbjct: 151 SPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 104 VIAVKRLNQESLQGHL--EWLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
+ A+K +N E + EI +L +L + +++L Y + D + +Y M G
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECG 138
Query: 160 SLE-NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 218
+++ N ++ I P K L A + + H +++ D K +N L+ ++
Sbjct: 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQHG----IVHSDLKPANFLI-VDGM 192
Query: 219 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
KL DFG+A + S V +GT Y PE
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQL-- 131
+G GG VF+ ++ + A+K +N E + EI +L +L
Sbjct: 64 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE-NHLFRRASYIQPLSWTIRMKVALGAAKG 190
+ +++L Y + D + +Y M G+++ N ++ I P K L A
Sbjct: 114 HSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ + H +++ D K +N L+ ++ KL DFG+A + S V +GT Y
Sbjct: 171 I-HQHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 251 PE 252
PE
Sbjct: 225 PE 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 104 VIAVKRLNQESLQGHL--EWLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
+ A+K +N E + EI +L +L + +++L Y + D + +Y M G
Sbjct: 34 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECG 90
Query: 160 SLE-NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 218
+++ N ++ I P K L A + + +++ D K +N L+ ++
Sbjct: 91 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-----QHGIVHSDLKPANFLI-VDGM 144
Query: 219 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
KL DFG+A + S V +GT Y PE
Sbjct: 145 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 104 VIAVKRLNQESLQGHL--EWLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
+ A+K +N E + EI +L +L + +++L Y + D + +Y M G
Sbjct: 38 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECG 94
Query: 160 SLE-NHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 218
+++ N ++ I P K L A + + +++ D K +N L+ ++
Sbjct: 95 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH-----QHGIVHSDLKPANFLI-VDGM 148
Query: 219 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPE 252
KL DFG+A + S V +GT Y PE
Sbjct: 149 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQL-- 131
+G GG VF+ ++ + A+K +N E + EI +L +L
Sbjct: 17 IGSGGSSKVFQVLNEK----------KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 66
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE-NHLFRRASYIQPLSWTIRMKVALGAAKG 190
+ +++L Y + D + +Y M G+++ N ++ I P K L A
Sbjct: 67 HSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ + H +++ D K +N L+ ++ KL DFG+A + S V +GT Y
Sbjct: 124 I-HQHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 251 PE 252
PE
Sbjct: 178 PE 179
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 35/214 (16%)
Query: 56 KSFSFNGLKTA----TRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLN 111
K+ GL ++ + S LG G FG V+ E + VK +
Sbjct: 8 KAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKE---------VVVKFIK 58
Query: 112 QESLQGHLEWLT---------EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG-SL 161
+E + W+ EI L ++ H N++K++ LV E G L
Sbjct: 59 KEKVLEDC-WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDL 117
Query: 162 ENHLFRRASYIQPL-SWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAK 220
+ R +PL S+ R V+ + YL +I+RD K NI++ ++ K
Sbjct: 118 FAFIDRHPRLDEPLASYIFRQLVS-----AVGYLRL--KDIIHRDIKDENIVIAEDFTIK 170
Query: 221 LSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
L DFG A G + GT Y APE +
Sbjct: 171 LIDFGSAAYLERGKLFYT---FCGTIEYCAPEVL 201
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYHPN 135
LG+G F +FKG E T +++ V L++ + + +L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKV--LDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 136 LVKLIGYCLEDDHRLLVYEFMPKGSLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLH 195
LV G C D +LV EF+ GSL+ +L + + I L W +++VA A + +L
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLE 130
Query: 196 SDKAKVIYRDFKTSNILL 213
+ +I+ + NILL
Sbjct: 131 EN--TLIHGNVCAKNILL 146
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 101 TGMVIAVKRLNQESL--QGHLEWLTEIKHLGQLYHPNLVKLIGYCLEDDHRL-LVYEFMP 157
TG V A+K +N+ + +G + E + + + + + +D++ L LV E+
Sbjct: 85 TGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144
Query: 158 KGSLENHLFRRASYI---QPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLD 214
G L L + I + + +A+ + L Y+H RD K NILLD
Sbjct: 145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH--------RDIKPDNILLD 196
Query: 215 LNYNAKLSDFG----LAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLV 262
+ +L+DFG L DG S V T P+Y++ I Q V
Sbjct: 197 RCGHIRLADFGSCLKLRADGTVRSLVAVGT----------PDYLSPEILQAV 238
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 56 KSFSFNGLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESL 115
++ F + R + +G GG VF+ + A+K +N E
Sbjct: 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQ----------VLNEKKQIYAIKYVNLEEA 65
Query: 116 QGHL--EWLTEIKHLGQL--YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE-NHLFRRAS 170
+ EI +L +L + +++L Y + D + +Y M G+++ N ++
Sbjct: 66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKK 122
Query: 171 YIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDG 230
I P K L A + + +++ D K +N L+ ++ KL DFG+A
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIH-----QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM 176
Query: 231 PTGSQSHVSTRVMGTYGYAAPE 252
V +GT Y PE
Sbjct: 177 QPDXXXVVKDSQVGTVNYMPPE 198
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 76 LGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHL--EWLTEIKHLGQL-- 131
+G GG VF+ ++ + A+K +N E + EI +L +L
Sbjct: 64 IGSGGSSKVFQVLNEKK----------QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ 113
Query: 132 YHPNLVKLIGYCLEDDHRLLVYEFMPKGSLE-NHLFRRASYIQPLSWTIRMKVALGAAKG 190
+ +++L Y + D + +Y M G+++ N ++ I P K L A
Sbjct: 114 HSDKIIRLYDYEITDQY---IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 191 LAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAA 250
+ + H +++ D K +N L+ ++ KL DFG+A + S V +G Y
Sbjct: 171 I-HQHG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP 224
Query: 251 PE 252
PE
Sbjct: 225 PE 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 101 TGMVIAVKRLNQESLQGHLEWLTEIKHLGQLY-HPNLVKLIGYCLEDDHRLLVYEFMPKG 159
T AVK + ++ E++ L Q H N+++LI + E+D LV+E M G
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96
Query: 160 SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN- 218
S+ +H+ +R + + L ++ V A L +LH+ + +RD K NIL +
Sbjct: 97 SILSHIHKRRHFNE-LEASV---VVQDVASALDFLHN--KGIAHRDLKPENILCEHPNQV 150
Query: 219 --AKLSDFGLAKDGP-TGSQSHVSTRVM----GTYGYAAPEYM 254
K+ DF L G S +ST + G+ Y APE +
Sbjct: 151 SPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 74 SVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEWLTEIKHLGQLYH 133
+LGEG +G V K +D T + I K+ + G EI+ L +L H
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLC----RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 134 PNLVKLIG--YCLEDDHRLLVYEFMPKGS---LENHLFRRASYIQPLSWTIRMKVALGAA 188
N+++L+ Y E +V E+ G L++ +R Q + ++
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL------I 119
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILLDLNYNAKLSDFGLAKDGPTGSQSHVSTRVMGTYGY 248
GL YLHS ++++D K N+LL K+S G+A+ + G+ +
Sbjct: 120 DGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 249 AAPEYMATGI 258
PE +A G+
Sbjct: 178 QPPE-IANGL 186
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 104 VIAVKRLNQESLQGHLEWLT----EIKHLGQLYHPNLVKLIGYCLEDDHRLLVYEFMPKG 159
++A+K L E+L + T E + G+L P++V + + E D +L V + G
Sbjct: 61 IVALK-LXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLING 118
Query: 160 -SLENHLFRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLNYN 218
L L R+ P + I ++ G A + A +RD K NIL+ +
Sbjct: 119 VDLAAXLRRQGPLAPPRAVAIVRQI------GSALDAAHAAGATHRDVKPENILVSADDF 172
Query: 219 AKLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYMATGIFQLVLLLFTFECSL 272
A L DFG+A + + V GT Y APE + ++ C L
Sbjct: 173 AYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVL 225
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 216
K+ +GL YLH+ K ++I+ D K NILL +N
Sbjct: 150 KIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVN 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 182 KVALGAAKGLAYLHSDKAKVIYRDFKTSNILLDLN 216
K+ +GL YLH+ K ++I+ D K NILL +N
Sbjct: 134 KIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVN 167
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 62/234 (26%)
Query: 62 GLKTATRNFRPDSVLGEGGFGCVFKGWIDEHTYAPARPGTGMVIAVKRLNQESLQGHLEW 121
GL+T+++ + LG G FG V + + E +G A+K++ Q+ +
Sbjct: 1 GLETSSKKYSLGKTLGTGSFGIVCEVFDIE---------SGKRFALKKVLQDPRYKN--- 48
Query: 122 LTEIKHLGQLYHPNLVKLIGYCL------------EDDHRLL------------------ 151
E+ + L H N++KL+ Y DDH L
Sbjct: 49 -RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNP 107
Query: 152 --------VYEFMPKGSLENHL--FRRASYIQPLSWTIRMKVALGAAKGLAYLHSDKAKV 201
+ E++P +L L F R+ P++ L A G ++HS +
Sbjct: 108 SQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG--FIHS--LGI 162
Query: 202 IYRDFKTSNILLDLNYNA-KLSDFGLAKDGPTGSQSHVSTRVMGTYGYAAPEYM 254
+RD K N+L++ N KL DFG AK S S + + Y APE M
Sbjct: 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAK---KLIPSEPSVAXICSRFYRAPELM 213
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 189 KGLAYLHSDKAKVIYRDFKTSNILL 213
+GL YLHS K K+I+ D K NIL+
Sbjct: 151 QGLDYLHS-KCKIIHTDIKPENILM 174
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,872,183
Number of Sequences: 62578
Number of extensions: 368126
Number of successful extensions: 2527
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 882
Number of HSP's gapped (non-prelim): 1011
length of query: 295
length of database: 14,973,337
effective HSP length: 98
effective length of query: 197
effective length of database: 8,840,693
effective search space: 1741616521
effective search space used: 1741616521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)