Query 022582
Match_columns 295
No_of_seqs 128 out of 819
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 07:49:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022582.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022582hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ct4_A PTS-dependent dihydroxy 100.0 1E-109 4E-114 789.1 26.8 261 1-266 70-332 (332)
2 2iu4_A DHA-DHAQ, dihydroxyacet 100.0 2E-109 5E-114 789.1 23.4 262 1-267 66-330 (336)
3 1oi2_A Hypothetical protein YC 100.0 3E-109 1E-113 791.6 24.7 267 1-268 78-365 (366)
4 1un8_A Dihydroxyacetone kinase 100.0 2E-100 6E-105 767.4 26.1 255 1-268 73-330 (552)
5 3nyi_A FAT acid-binding protei 88.3 2.2 7.4E-05 39.3 9.3 96 12-121 66-166 (297)
6 3fdj_A DEGV family protein; GU 87.5 2.9 9.7E-05 38.1 9.5 195 12-246 61-276 (278)
7 3jr7_A Uncharacterized EGV fam 87.4 2 7E-05 39.6 8.6 195 12-235 81-287 (298)
8 3pl5_A SMU_165, putative uncha 87.2 2.1 7.2E-05 40.1 8.6 183 13-235 98-303 (320)
9 1pzx_A Hypothetical protein AP 79.8 7.6 0.00026 35.4 8.9 198 12-246 63-283 (289)
10 2dt8_A DEGV family protein; fa 77.1 8.6 0.00029 34.9 8.4 94 12-122 62-158 (280)
11 2g7z_A Conserved hypothetical 74.6 8.2 0.00028 35.1 7.5 94 12-122 66-163 (282)
12 2bz1_A GTP cyclohydrolase II; 73.0 1.8 6E-05 38.2 2.5 56 4-59 53-143 (196)
13 3ct6_A PTS-dependent dihydroxy 71.2 6.7 0.00023 32.0 5.5 78 15-118 45-124 (131)
14 3gx1_A LIN1832 protein; APC633 71.1 23 0.00078 28.5 8.7 77 17-116 49-125 (130)
15 3egl_A DEGV family protein; al 69.5 6.8 0.00023 35.7 5.7 196 14-249 45-264 (277)
16 3b48_A Uncharacterized protein 67.0 10 0.00035 30.7 5.8 77 15-113 50-129 (135)
17 3lup_A DEGV family protein; PS 63.3 11 0.00039 34.2 6.0 195 12-246 65-282 (285)
18 3fys_A Protein DEGV; fatty aci 59.8 50 0.0017 30.5 9.7 185 12-235 96-301 (315)
19 1mgp_A Hypothetical protein TM 55.0 24 0.00081 32.7 6.6 94 12-122 89-188 (313)
20 3lub_A Putative creatinine ami 44.0 62 0.0021 28.9 7.4 60 151-226 83-143 (254)
21 3djh_A Macrophage migration in 40.0 15 0.00052 28.4 2.4 42 189-230 56-97 (114)
22 2yxd_A Probable cobalt-precorr 39.5 1E+02 0.0035 23.7 7.4 56 3-66 102-157 (183)
23 2lnd_A De novo designed protei 39.0 50 0.0017 25.6 5.1 50 150-212 24-73 (112)
24 3gdw_A Sigma-54 interaction do 38.8 45 0.0015 27.1 5.2 73 16-111 48-122 (139)
25 1uiz_A MIF, macrophage migrati 37.5 20 0.0007 27.4 2.7 43 188-230 56-98 (115)
26 3b64_A Macrophage migration in 36.2 20 0.00067 27.4 2.4 43 188-230 56-98 (112)
27 4dh4_A MIF; trimer, isomerase; 35.7 16 0.00055 28.1 1.9 42 189-230 57-98 (114)
28 1hfo_A Migration inhibitory fa 34.4 21 0.00072 27.2 2.3 43 188-230 55-97 (113)
29 3fwu_A Macrophage migration in 33.5 19 0.00067 29.0 2.1 43 188-230 77-119 (133)
30 2os5_A Acemif; macrophage migr 33.3 30 0.001 26.7 3.1 43 188-230 56-98 (119)
31 2id1_A Hypothetical protein; a 32.1 1.5E+02 0.005 24.2 7.2 92 162-260 2-110 (130)
32 2xcz_A Possible ATLS1-like lig 28.8 25 0.00084 26.9 1.9 43 188-230 56-98 (115)
33 3fwt_A Macrophage migration in 28.7 19 0.00066 29.0 1.3 42 189-230 78-119 (133)
34 1uf3_A Hypothetical protein TT 28.5 55 0.0019 26.6 4.1 37 5-41 37-75 (228)
35 2q8u_A Exonuclease, putative; 28.0 31 0.0011 31.0 2.7 51 5-57 66-122 (336)
36 3t5s_A Gilaa.00834.A, macropha 26.8 19 0.00065 29.1 0.9 43 188-230 77-119 (135)
37 4f0j_A Probable hydrolytic enz 26.7 65 0.0022 26.4 4.3 36 186-227 44-79 (315)
38 2qip_A Protein of unknown func 26.3 83 0.0028 25.7 4.8 40 20-64 100-140 (165)
39 2wkb_A Macrophage migration in 25.3 26 0.00088 27.5 1.4 43 188-230 56-98 (125)
40 1byr_A Protein (endonuclease); 24.9 81 0.0028 24.5 4.4 51 10-64 7-60 (155)
41 3no4_A Creatininase, creatinin 24.7 2.2E+02 0.0074 25.7 7.7 56 151-216 92-147 (267)
42 4fbl_A LIPS lipolytic enzyme; 24.5 71 0.0024 27.1 4.2 33 188-226 51-83 (281)
43 1boo_A Protein (N-4 cytosine-s 23.6 65 0.0022 29.2 4.0 52 18-69 65-123 (323)
44 1bs0_A Protein (8-amino-7-oxon 23.2 1.7E+02 0.0057 25.8 6.6 52 15-71 154-208 (384)
45 1pdo_A Mannose permease; phosp 23.0 99 0.0034 24.5 4.6 78 16-115 45-122 (135)
46 2dr1_A PH1308 protein, 386AA l 22.7 1.6E+02 0.0056 25.6 6.4 53 14-71 132-186 (386)
47 3w1s_C Ubiquitin-like protein 22.0 29 0.00098 26.8 1.0 32 8-42 56-87 (91)
48 4ham_A LMO2241 protein; struct 21.8 2.6E+02 0.0089 21.7 6.8 65 160-237 13-82 (134)
49 3qit_A CURM TE, polyketide syn 21.7 1.1E+02 0.0038 24.3 4.7 35 187-227 25-59 (286)
50 3n0v_A Formyltetrahydrofolate 21.5 71 0.0024 29.1 3.8 47 10-63 95-144 (286)
51 3sxy_A Transcriptional regulat 21.2 2.4E+02 0.0083 23.4 6.9 63 162-237 13-79 (218)
52 3sty_A Methylketone synthase 1 20.8 90 0.0031 25.0 3.9 68 185-258 9-76 (267)
53 3ihu_A Transcriptional regulat 20.7 1.1E+02 0.0038 25.7 4.6 64 161-237 16-83 (222)
54 3qd7_X Uncharacterized protein 20.6 2.1E+02 0.007 23.3 6.1 75 161-248 55-132 (137)
55 3e05_A Precorrin-6Y C5,15-meth 20.4 3.3E+02 0.011 21.7 7.4 57 3-64 110-166 (204)
56 3frk_A QDTB; aminotransferase, 20.3 75 0.0026 28.1 3.6 38 30-71 124-161 (373)
57 3rm3_A MGLP, thermostable mono 20.3 1.1E+02 0.0039 24.7 4.5 36 185-226 37-72 (270)
58 3pe6_A Monoglyceride lipase; a 20.2 1.1E+02 0.0038 24.6 4.4 36 186-227 40-75 (303)
No 1
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp}
Probab=100.00 E-value=1.2e-109 Score=789.14 Aligned_cols=261 Identities=36% Similarity=0.588 Sum_probs=248.1
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 022582 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (295)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gR 80 (295)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 149 (332)
T 3ct4_A 70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR 149 (332)
T ss_dssp SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCcCCCeeEEeccccCCCCccccc
Q 022582 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (295)
Q Consensus 81 RGlAGtvlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emE~G~GIHGEpG~~r~~ 159 (295)
||+|||||||||+|||||+|+||+||++++|++++|+|||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~ 229 (332)
T 3ct4_A 150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK 229 (332)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCCC
Q 022582 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239 (295)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm~ 239 (295)
++++++++++|+++|+++ +++++||+++|||||||+||.||||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus 230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~ 304 (332)
T 3ct4_A 230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA 304 (332)
T ss_dssp CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence 999999999999999997 88999999999999999999999999999999999888 9999999999999999999
Q ss_pred cceEEEecccH-HHHHhhcCCCCCCCCC
Q 022582 240 GFSISIMKADE-VILKHLDATTKAPHWP 266 (295)
Q Consensus 240 GfSiTLl~ldd-~l~~lldap~~ap~w~ 266 (295)
||||||+|+|| |+++|||+||+||+|+
T Consensus 305 G~SiTll~ldd~el~~lldaP~~tp~w~ 332 (332)
T 3ct4_A 305 GLSLTMIKLEDDQWLKNLNEDVKTISWG 332 (332)
T ss_dssp EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence 99999999999 9999999999999995
No 2
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A
Probab=100.00 E-value=1.5e-109 Score=789.07 Aligned_cols=262 Identities=32% Similarity=0.497 Sum_probs=257.4
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 022582 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (295)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gR 80 (295)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 66 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR 145 (336)
T 2iu4_A 66 MLAAAVTGPLFIPPKSKNILKAIRQVNSGKGVFVIIKNFEADLKEFNEAIKEARTEGIDVRYIVSHDDISVNAYNFHKRH 145 (336)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCSSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCHHHHHTCCSCC
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhCCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCCCCCCCCcCCCeeEEeccccCCCCcccccC
Q 022582 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADL 160 (295)
Q Consensus 81 RGlAGtvlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c~~Pg~~~~f~L~~~emE~G~GIHGEpG~~r~~~ 160 (295)
||+|||||||||+|||||+|+||+||+++||++++|+|||||+|++||+|+.+|+|+|++||||||||||||||++|.++
T Consensus 146 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGvaL~~ctvP~~~p~F~l~~~emE~G~GIHGEpG~~r~~~ 225 (336)
T 2iu4_A 146 RGVAGTILLHKILGAFAKEGGSIDEIEQLALSLSPEIYTLGVALAPVHFPHQKTSFVLAEDEVSFGIGIXGEPGYRVEKF 225 (336)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEEEEECCEETTTEESSCCCTTEEEESCCCCCCCCSEEEEC
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCccCCCCCCCCccCCCceEecccccCCCCccccCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCC--CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCC
Q 022582 161 QPVDVVVSHVLKQILSTETNYVPIT--RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDM 238 (295)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~l~~~--~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm 238 (295)
+++++++++|+++|+++ ++++ +||+++|||||||+||.||||++++++.++|+++ ||+|+|+|+|+|||||||
T Consensus 226 ~~a~el~~~m~~~ll~~----l~~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSLdM 300 (336)
T 2iu4_A 226 EGSERIAIELVNKLKAE----INWQKKANKNYILLVNGLGSTTLMELYSFQYDVMRLLELE-GLSVKFCKVGNLMTSCDM 300 (336)
T ss_dssp CCHHHHHHHHHHHHHHH----HCGGGCSCCEEEEEEEECBSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEEECSSCCTTB
T ss_pred CCHHHHHHHHHHHHHhh----CccccCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC-CCeEEEEeeecccCccCC
Confidence 99999999999999997 7888 8999999999999999999999999999999888 999999999999999999
Q ss_pred CcceEEEecccH-HHHHhhcCCCCCCCCCC
Q 022582 239 AGFSISIMKADE-VILKHLDATTKAPHWPV 267 (295)
Q Consensus 239 ~GfSiTLl~ldd-~l~~lldap~~ap~w~~ 267 (295)
+||||||+|+|| |+++|||+||+||+|+.
T Consensus 301 ~G~SiTll~ldd~el~~lldaP~~tpa~~~ 330 (336)
T 2iu4_A 301 SGISLTLCSVKDPKWLDYLNVPTGAFAWLE 330 (336)
T ss_dssp EEEEEEEEECCSTHHHHHHHSCCCCTTCCC
T ss_pred CccEEEEEECCHHHHHHHhcCCCCCcccch
Confidence 999999999999 99999999999999974
No 3
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A
Probab=100.00 E-value=3.3e-109 Score=791.63 Aligned_cols=267 Identities=39% Similarity=0.624 Sum_probs=251.2
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 022582 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (295)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gR 80 (295)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus 78 MLdaAv~G~VFaSPs~~qi~~ai~av~~g~GvL~ivkNYtGDvlNF~mA~E~a~~eGi~v~~Vvv~DDvAv~~~~~~~gR 157 (366)
T 1oi2_A 78 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR 157 (366)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEecCceecCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988778999
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCcCCCeeEEeccccCCCCccccc
Q 022582 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD 159 (295)
Q Consensus 81 RGlAGtvlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emE~G~GIHGEpG~~r~~ 159 (295)
||+|||||||||+|||||+|+||+||++++|++++|++||||||++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus 158 RGvAGtvlv~KiaGAaAe~G~sL~ev~~~a~~~~~~~~SiGvaL~~ctvP~~g~p~F~l~~~emE~G~GIHGEPG~~r~~ 237 (366)
T 1oi2_A 158 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP 237 (366)
T ss_dssp CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcc--------------------cCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 022582 160 LQPVDVVVSHVLKQILST--------------------ETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219 (295)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~--------------------~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~ 219 (295)
++++++++++|+++|+++ +|.++++++||+|+|||||||+||.+|||++++++.++|+++
T Consensus 238 ~~sa~elv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vLVNgLG~T~~~El~iv~~~v~~~L~~~ 317 (366)
T 1oi2_A 238 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA 317 (366)
T ss_dssp CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccccccccccccccccccccccccCCCCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHHC
Confidence 999999999999999986 144689999999999999999999999999999999999988
Q ss_pred cCCeEEEeeeeccccccCCCcceEEEecccHHHHHhhcCCCCCCCCCCC
Q 022582 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (295)
Q Consensus 220 ~gi~v~r~~vG~~~TSldm~GfSiTLl~ldd~l~~lldap~~ap~w~~~ 268 (295)
||+|+|+|+|+|||||||+||||||+|+|||+++|||+||+||+|+|+
T Consensus 318 -gi~v~r~~vG~y~TSLdM~G~SiTLl~lddel~~lldaP~~tpa~~~g 365 (366)
T 1oi2_A 318 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 365 (366)
T ss_dssp -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred -CCeEEEEeeecccCCCCCCccEEEEEecCHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999985
No 4
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A*
Probab=100.00 E-value=1.7e-100 Score=767.37 Aligned_cols=255 Identities=50% Similarity=0.782 Sum_probs=250.1
Q ss_pred CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 022582 1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR 80 (295)
Q Consensus 1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gR 80 (295)
||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++ +||
T Consensus 73 ml~aav~G~vFaSPs~~~i~~ai~a~~~g~Gvl~ivkNYtGD~lnF~~A~e~a~~~gi~v~~v~v~DDva~~~~---~~R 149 (552)
T 1un8_A 73 MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNVEMLIVGDDISLPDN---KHP 149 (552)
T ss_dssp SBSEEEEEEETSCCCHHHHHHHHHHHCCTTCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCTTC---SSC
T ss_pred ccceeeecCcCCCCCHHHHHHHHHhhcCCCCEEEEecccHHHHhhHHHHHHHHHhcCCcEEEEEecCcccCCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 899
Q ss_pred ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCCCCCCC-CcCCCeeEEeccccCCCCccccc
Q 022582 81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVAD 159 (295)
Q Consensus 81 RGlAGtvlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c~~Pg~~~~f-~L~~~emE~G~GIHGEpG~~r~~ 159 (295)
||+|||||||||+||+||+|+||+||++++|++++|+|||||+|++||+|+++|+| +|++||||||||||||||++|.+
T Consensus 150 RGvaGtv~v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~s~gval~~ctvP~~~~~f~~l~~~e~E~G~GiHGEpG~~~~~ 229 (552)
T 1un8_A 150 RGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSLGVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVID 229 (552)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEEEEECCCCSSCCSSSCCBCTTCEEETCCTTCCCCSEEES
T ss_pred CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhceEEEEEcCCccCCCCCCCcccCCCCceEeccccCCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee--ccccccC
Q 022582 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG--SFMTSLD 237 (295)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG--~~~TSld 237 (295)
++++++++++|+++|+++ ++++ |+|+|||||||+||.||||++++++.++|+++ | +|+|+| +||||||
T Consensus 230 ~~~a~~~~~~l~~~ll~~----~~~~--~~v~~lvN~lG~t~~~El~i~~~~v~~~L~~~-g---~~~~vG~~~~~Tsld 299 (552)
T 1un8_A 230 TQNSAQVVNLMVDKLLAA----LPET--GRLAVMINNLGGVSVAEMAIITRELASSPLHS-R---IDWLIGPASLVTALD 299 (552)
T ss_dssp CCBHHHHHHHHHHHHHHH----SCSS--CCEEEEEEECBCSCHHHHHHHHHHHHTSTTGG-G---EEEEEEEECSSCCTT
T ss_pred CCCHHHHHHHHHHHHHhh----CCCc--CcEEEEEeCCCCCCHHHHHHHHHHHHHHHHHc-C---CeeeeCCccccCccC
Confidence 999999999999999997 7877 99999999999999999999999999999888 8 999999 9999999
Q ss_pred CCcceEEEecccHHHHHhhcCCCCCCCCCCC
Q 022582 238 MAGFSISIMKADEVILKHLDATTKAPHWPVG 268 (295)
Q Consensus 238 m~GfSiTLl~ldd~l~~lldap~~ap~w~~~ 268 (295)
|+||||||+|+|||+++|||+||++|+|++.
T Consensus 300 m~G~SiTll~ld~el~~~ldap~~~~~~~~~ 330 (552)
T 1un8_A 300 MKGFSLTAIVLEESIEKALLTEVETSNWPTP 330 (552)
T ss_dssp BEEEEEEEEECCTTHHHHHHSCCCCSSCCCC
T ss_pred CCcceEEeecCCHHHHHHhcCCCCCCCCCCc
Confidence 9999999999999999999999999999975
No 5
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=88.34 E-value=2.2 Score=39.31 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHhc-cCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccch
Q 022582 12 ASPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (295)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~--Gi~v~~viV~DDva~~~~~~~~gRRGlAGt 86 (295)
+.||+.++.++.+.+ ..+..||+|- ..-+|=.=+.-+|+++.+++ +.+|..| |- |..-.|.
T Consensus 66 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~e~~~~~~I~Vi---DS-----------~~~s~g~ 131 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVI---DS-----------KQNTVTQ 131 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTTCCEEEEESCTTTCSHHHHHHHHHHHHHHHCTTCCEEEE---EC-----------SCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHCCCeEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEE---eC-----------CchHHHH
Confidence 358999999998765 4557788875 55677777788888887554 4444432 31 2333455
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccce
Q 022582 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMG 121 (295)
Q Consensus 87 vlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tig 121 (295)
-++..-|-.++++|.|++|+.+..++..+++++.=
T Consensus 132 g~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f 166 (297)
T 3nyi_A 132 ALLIDQFVRMLEDGLSFEQAMSKLDALMASARIFF 166 (297)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEE
Confidence 55555588899999999999999999998877653
No 6
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=87.47 E-value=2.9 Score=38.12 Aligned_cols=195 Identities=11% Similarity=0.109 Sum_probs=111.0
Q ss_pred CCCCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhH
Q 022582 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILV 89 (295)
Q Consensus 12 aSPs~~qIl~ai~~v~~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv 89 (295)
+.||+.++.++.+ ....||+|- ..-+|=.=+.-+|+++..++--..++.+|+- |..-.|.-++
T Consensus 61 Sqps~~~~~~~f~---~~~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS------------~~~s~g~g~~ 125 (278)
T 3fdj_A 61 ACPGIDAWLEAFG---DDDEIFVVTITAGMSGTYNSAMAARAVYLEEHPQAKVRVIDS------------KSTGPQMRII 125 (278)
T ss_dssp ECCCHHHHHHHHT---TCSEEEEEESCTTTCSHHHHHHHHHHHHHTTCTTCEEEEEEC------------SSCTHHHHHH
T ss_pred cCCCHHHHHHHHh---cCCcEEEEECCCcHhHHHHHHHHHHHHHHhhCCCCeEEEEcC------------CchhHHHHHH
Confidence 3488888888886 456677765 4566766678888888765422233333322 2233565566
Q ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecccccc-CCC---------------CCCCCc-CCCeeEEeccccCC
Q 022582 90 NKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTL-PGQ---------------VTSDRL-GPGKMELGLGIHGE 152 (295)
Q Consensus 90 ~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c~~-Pg~---------------~~~f~L-~~~emE~G~GIHGE 152 (295)
..-|-.++++|.|++|+.+..++..+++++.=+-=+==++ =|| +|-.++ .+|+++
T Consensus 126 v~~A~~~~~~G~s~~eI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~-------- 197 (278)
T 3fdj_A 126 LEQLQQMIEEGKKFEEIDGAIDAYMQKTRLFCSLKSLHNLAQNGRVSKVVASAAEVLGISVIGTASSHGTLE-------- 197 (278)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESCCHHHHHTTSSCHHHHHGGGSTTEEEEEEECTTSSEE--------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcceEEEEECChHHHHHCCcchHHHHHHHHhhCcEEEEEEccCCeEE--------
Confidence 6667789999999999999999999888765331110000 011 112222 233332
Q ss_pred CCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeeeec
Q 022582 153 PGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYTGS 231 (295)
Q Consensus 153 pG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~g-i~v~r~~vG~ 231 (295)
...+..+-+..+++|++.+.+. .. ...++. +.+. + . . |. +.++.+.|+++++ .++.-..+|.
T Consensus 198 ---~~~KvRg~kka~~~l~~~~~~~-----~~-~~~~v~-i~h~-~-~-~-e~---a~~l~~~l~~~~~~~~i~i~~~g~ 260 (278)
T 3fdj_A 198 ---AIGKCRGDKKLLVKLQALLDDA-----GY-EGGKLR-ICHV-E-N-E-AL---ADKIADMIKQAYGTTDVCVYKAGG 260 (278)
T ss_dssp ---EEEEEESHHHHHHHHHHHHHHH-----TC-CSCCEE-EEES-S-C-H-HH---HHHHHHHHHHHHCCCCEEEEECCH
T ss_pred ---EeeeecCHHHHHHHHHHHHHHh-----CC-CCcEEE-EEec-C-C-H-HH---HHHHHHHHHHhCCCCcEEEEEeCc
Confidence 2344555566778888877653 11 223443 3332 1 2 2 32 3455556666554 3555556666
Q ss_pred ccc-ccCCCcceEEEe
Q 022582 232 FMT-SLDMAGFSISIM 246 (295)
Q Consensus 232 ~~T-Sldm~GfSiTLl 246 (295)
-++ =.+-.|+.|...
T Consensus 261 vi~~h~G~gal~i~~~ 276 (278)
T 3fdj_A 261 LCSYYAERGGIILSCE 276 (278)
T ss_dssp HHHHHHCTTCEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 554 456666666654
No 7
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=87.38 E-value=2 Score=39.59 Aligned_cols=195 Identities=13% Similarity=0.138 Sum_probs=108.9
Q ss_pred CCCCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccchh
Q 022582 12 ASPPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (295)
Q Consensus 12 aSPs~~qIl~ai~~v~~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~--Gi~v~~viV~DDva~~~~~~~~gRRGlAGtv 87 (295)
+.||+.++.++.+. ....||+|- ..-+|=.=+.-+|+++..++ +.+|. +|+- |.--.|.=
T Consensus 81 Sqps~~~~~~~f~~--~~~~Ii~i~iSs~LSGTy~sA~~Aa~~~~e~~~~~~I~--ViDS------------~~~s~g~g 144 (298)
T 3jr7_A 81 SCPSPERYMESYHC--DAERIYVVTLSAELSGSYNSAVLGKNLYEEEYGEKQIH--VFNS------------RSASVGET 144 (298)
T ss_dssp ECCCHHHHHHHHCS--SCSEEEEEESCTTTCSHHHHHHHHHHHHHHHHCCCEEE--EEEC------------SSCTHHHH
T ss_pred CCCCHHHHHHHHHh--cCCeEEEEECCcchhHHHHHHHHHHHHHHhhCCCCeEE--EECC------------CchhHHHH
Confidence 35899999999885 556777765 45667666778888877654 33333 3322 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeec--cccccCCCCC--CCCcCCCeeEEeccc-cCCCCc--ccccC
Q 022582 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVAL--SVCTLPGQVT--SDRLGPGKMELGLGI-HGEPGA--AVADL 160 (295)
Q Consensus 88 lv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigval--s~c~~Pg~~~--~f~L~~~emE~G~GI-HGEpG~--~r~~~ 160 (295)
++..-|-.++++|.|++||.+..++..+++++.=+-= ..=.- ||+- ..-+=-+-+-|=-=+ +.+-|. ...+.
T Consensus 145 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~k-GGRis~~~a~ig~lL~IKPIl~~~~~G~l~~~~Kv 223 (298)
T 3jr7_A 145 LIALKVQQCEKAGMTFEEVVESVECYIEEQHTYFVLENLDTLRK-NGRLTGIKSLVAGALNIKPIMGSTPQGTICQKEKA 223 (298)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCEEEECSCCHHHHH-TTCSTTCCC--CCCTTEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhCeEEEEeCChHHHHh-CCeehHHHHHHHhhcCcEEEEEEccCCeEEEeeec
Confidence 6666677899999999999999999999888764311 10000 1110 000000111111122 123342 24556
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeeeccccc
Q 022582 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTGSFMTS 235 (295)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~vG~~~TS 235 (295)
.+-+..++.|++.+.++ .. ......+.+.+. +. . |. +.++.+.|+++++. ++.-..+|+.+.+
T Consensus 224 Rg~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~~--~-e~---a~~l~~~l~~~~~~~~i~i~~~g~vig~ 287 (298)
T 3jr7_A 224 RGMKKALVKMADCVAAD----VV-NAGDKILAIAHC-NC--E-ER---AKEVQRLLKERFAVKSSFIVDTSGISTV 287 (298)
T ss_dssp ESHHHHHHHHHHHHHHH----CC-SGGGCEEEEEES-SC--H-HH---HHHHHHHHHHHCCCSEEEEEECCHHHHH
T ss_pred CCHHHHHHHHHHHHHHH----hc-cCCCcEEEEEeC-CC--H-HH---HHHHHHHHHhhcCCCcEEEEEEccEEEE
Confidence 66677788888888764 22 112233334442 22 2 32 34556667777654 5555566765553
No 8
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=87.18 E-value=2.1 Score=40.05 Aligned_cols=183 Identities=17% Similarity=0.144 Sum_probs=109.0
Q ss_pred CCCHHHHHHHHHhc-cCCCceEEEe--eccccccccHHHHHHHHHhc--CCcEEEEEecccccCCCCCCCCCcccccchh
Q 022582 13 SPPVDSILAGIHAV-TGPMGCLLIV--TNYTGDRLNFGLAAEQAKSE--GYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (295)
Q Consensus 13 SPs~~qIl~ai~~v-~~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~--Gi~v~~viV~DDva~~~~~~~~gRRGlAGtv 87 (295)
.||+.++.++.+.. ..+..||+|- ..-+|=.=+.-+|+++..++ +.+|.. | |- +..-.|.-
T Consensus 98 qPs~~~~~~~f~~l~~~g~~Ii~I~iSS~LSGTy~sA~~Aa~~~~e~~~~~~I~V--i-DS-----------~~~s~g~g 163 (320)
T 3pl5_A 98 QVNVGQFESYFRQSAENGQEVLYIAFSSVLSGTYQSAVMARDIVLEEYPQASIEI--V-DT-----------LAATGGEG 163 (320)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECCTTTCTHHHHHHHHHHHHHHHCTTCCEEE--E-EC-----------CCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCeEEEEecCchHhHHHHHHHHHHHHHHhhCCCCeEEE--E-cC-----------CchHHHHH
Confidence 58999999998765 3557788775 45677767788888887654 444433 3 31 22335555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccc------cccCC----------CCCCCCcC-CCeeEEecccc
Q 022582 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSV------CTLPG----------QVTSDRLG-PGKMELGLGIH 150 (295)
Q Consensus 88 lv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~------c~~Pg----------~~~~f~L~-~~emE~G~GIH 150 (295)
++..-|-.++++|.|++||.+..++..+++++.=+-=+= --++. =+|-..+. +|+++
T Consensus 164 ~lv~~Aa~l~~~G~s~eeI~~~le~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~iG~lL~IKPIl~~~~dG~l~------ 237 (320)
T 3pl5_A 164 YLAMLAAQAREEGKSLKETKELILDVGPRLRTFFLVDNLYHLMRGGRLSKTSAIVGSLVNIKPLLWLDASGKLV------ 237 (320)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHGGGEEEEEECSCSHHHHHHTCCC--------CTTEEEEEEECTTSCEE------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECChHHHHhCCCccHHHHHHHhhhCceEEEEEccCCeEE------
Confidence 666667789999999999999999999988765331110 00000 01112222 23322
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeee
Q 022582 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYT 229 (295)
Q Consensus 151 GEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~v 229 (295)
...+..+-+..++.|++.+.+. .. ..+ +.+.+. +. .|. +.++.+.|+++++. ++.-..+
T Consensus 238 -----~~~KvRg~kka~~~lv~~~~~~----~~---~~~-v~I~h~-~~---~e~---a~~l~~~l~~~~~~~~i~i~~i 297 (320)
T 3pl5_A 238 -----PIAKLRGRKKGMKEMLKRATAD----VA---HDT-AVVAYA-ND---SEA---AENLKEQLLANEKIKNVVTLPL 297 (320)
T ss_dssp -----EEEEEESHHHHHHHHHHHHTSS----CC---SSE-EEEEES-SC---HHH---HHHHHHHHHTSTTCCEEEEEEC
T ss_pred -----EEeeecCHHHHHHHHHHHHHHh----cC---CCE-EEEEeC-CC---HHH---HHHHHHHHHhhcCCCcEEEEEe
Confidence 2355566677888899888653 22 233 444442 21 233 35667777777664 4444556
Q ss_pred eccccc
Q 022582 230 GSFMTS 235 (295)
Q Consensus 230 G~~~TS 235 (295)
|+-+.+
T Consensus 298 g~vIg~ 303 (320)
T 3pl5_A 298 GPVIST 303 (320)
T ss_dssp CHHHHH
T ss_pred ccEEEE
Confidence 655543
No 9
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=79.83 E-value=7.6 Score=35.43 Aligned_cols=198 Identities=10% Similarity=0.045 Sum_probs=108.8
Q ss_pred CCCCHHHHHHHHHhc-cCCCceEEEee--ccccccccHHHHHHHHHh--cCCcEEEEEecccccCCCCCCCCCcccccch
Q 022582 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKS--EGYKVEIVIVGDDCALPPPRGIAGRRGLAGT 86 (295)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~~GvL~iv~--NYtGD~lNFgmA~E~A~~--~Gi~v~~viV~DDva~~~~~~~~gRRGlAGt 86 (295)
+.||+.++.++.+.+ ..+..||+|-- .-+|=.=+.-+|+++..+ .+.+|. +| | -|..-.|.
T Consensus 63 Sqps~~~~~~~f~~l~~~g~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~--Vi-D-----------S~~~s~g~ 128 (289)
T 1pzx_A 63 AQPSPLAMKELFLPYAKENRPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLT--II-D-----------SKCASLGQ 128 (289)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEE--EE-E-----------CCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEE--EE-c-----------CchhhHHH
Confidence 458999999999766 45567877742 345555566677776543 243433 22 2 13334555
Q ss_pred hhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecc--cc----ccCC-C---------CCCCCcCCCeeEEecccc
Q 022582 87 ILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--VC----TLPG-Q---------VTSDRLGPGKMELGLGIH 150 (295)
Q Consensus 87 vlv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals--~c----~~Pg-~---------~~~f~L~~~emE~G~GIH 150 (295)
-++..-|-.++++|+|++||.+..++..+++++.=+-=+ .= -++. . +|-..+.+|+++
T Consensus 129 g~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPil~~~~G~l~------ 202 (289)
T 1pzx_A 129 GLAVMKAVELAKQNTPYNLLCETIESYCRHMEHIFTVDNLDYLARGGRISKTAAAFGGLLNIKPLLHVEDGALI------ 202 (289)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEECSCHHHHHHHTSCC----------CEEEEEEEETTEEE------
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCEEEEEeCCHHHHHHCCCccHHHHHHHHhhCceEEEEEECCEEE------
Confidence 666667778899999999999999999998887644111 00 0111 0 111122223222
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeee
Q 022582 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (295)
Q Consensus 151 GEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~g-i~v~r~~v 229 (295)
...+..+.+..+++|++.+.+. .. ...+..+.+..+ + . .| -+.++.+.|+++++ .++....+
T Consensus 203 -----~~~KvRg~kka~~~l~~~~~~~----~~-~~~~~~v~i~h~-~-~--~e---~a~~l~~~l~~~~~~~~i~i~~~ 265 (289)
T 1pzx_A 203 -----PLEKWRGRKKVLKRMVELMGER----GD-DLQKQTIGISHA-D-D--EE---TALELKQMIEETHGCTRFFLSDI 265 (289)
T ss_dssp -----EEEEEESHHHHHHHHHHHHHHH----CS-SGGGSEEEEEES-S-C--HH---HHHHHHHHHHHHTCCCEEEEEEC
T ss_pred -----EeeccCCHHHHHHHHHHHHHHH----hc-cCCCeEEEEEEC-C-C--HH---HHHHHHHHHHhhCCCCcEEEEEe
Confidence 2345555667778888877653 11 111223333332 2 2 23 23455566666654 35555566
Q ss_pred eccccccCC-CcceEEEe
Q 022582 230 GSFMTSLDM-AGFSISIM 246 (295)
Q Consensus 230 G~~~TSldm-~GfSiTLl 246 (295)
|+-+.+-=. .++.|..+
T Consensus 266 g~vig~H~Gpg~igi~~~ 283 (289)
T 1pzx_A 266 GSAIGAHAGPGTIALFFL 283 (289)
T ss_dssp CHHHHHHHCTTCEEEEEE
T ss_pred ccEEEEEeCCCeEEEEEE
Confidence 765554333 33555444
No 10
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=77.10 E-value=8.6 Score=34.90 Aligned_cols=94 Identities=19% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHHHhc-cCCCceEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhh
Q 022582 12 ASPPVDSILAGIHAV-TGPMGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (295)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~~GvL~iv~--NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvl 88 (295)
+.||+.++.++.+.+ ..+..||+|-- .-+|= |.- +.+|+.+ ++-++.+| | -|..-.|.=+
T Consensus 62 Sqps~~~~~~~f~~l~~~~~~ii~i~lSs~LSGT---y~s-A~~aa~~-~~~~I~Vi-D-----------S~~~s~g~g~ 124 (280)
T 2dt8_A 62 SQPSPEDFARVYREALEEADHVLSLHISGKLSGT---VQS-AELAAQE-FPGRVTVV-D-----------TQAASLGVGM 124 (280)
T ss_dssp ECCCHHHHHHHHHHHTTSCSEEEEEESCTTTCTH---HHH-HHHHHTT-STTSEEEE-E-----------CSCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCCcHhHH---HHH-HHHHHHh-CCCCEEEE-C-----------CchhHHHHHH
Confidence 358999999999776 34466777642 22332 222 3333332 11122222 2 1233355566
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccee
Q 022582 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (295)
Q Consensus 89 v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigv 122 (295)
+..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 125 ~v~~a~~l~~~G~s~eei~~~l~~~~~~~~~~f~ 158 (280)
T 2dt8_A 125 MVLRAKELLEEGQSLEAVLAELERLRRDHFVRFS 158 (280)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEE
Confidence 6667778899999999999999999998887543
No 11
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=74.62 E-value=8.2 Score=35.13 Aligned_cols=94 Identities=18% Similarity=0.063 Sum_probs=61.7
Q ss_pred CCCCHHHHHHHHHhc-cCC-CceEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 022582 12 ASPPVDSILAGIHAV-TGP-MGCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (295)
Q Consensus 12 aSPs~~qIl~ai~~v-~~~-~GvL~iv~--NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtv 87 (295)
+.||+.++.++.+.. ..+ ..||+|-- .-+|=.=+.-+|++ . ++.+|. |=| -|..-.|.-
T Consensus 66 Sqps~~~~~~~f~~l~~~gy~~ii~i~iSs~LSGTy~sA~~aa~-~--~~~~I~---ViD-----------S~~~s~g~g 128 (282)
T 2g7z_A 66 SQPPVGLFAETYENLVKKGVTDIVAIHLSPALSGTIEASRQGAE-I--AEAPVT---VLD-----------SGFTDQAMK 128 (282)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCEEEEEECCTTTCTHHHHHHHHHH-H--HTCCEE---EEE-----------CSSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEECCCcHhHHHHHHHHHHh-C--CCCeEE---EEC-----------CCchhHHHH
Confidence 458999999999776 344 56777642 33444444555555 3 222322 222 133345666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhcccee
Q 022582 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGV 122 (295)
Q Consensus 88 lv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigv 122 (295)
++..-|-.++++|+|++||.+..++..+++++.=+
T Consensus 129 ~~v~~A~~l~~~G~s~~eI~~~l~~~~~~~~~~f~ 163 (282)
T 2g7z_A 129 FQVVEAAKMAKAGASLNEILAAVQAIKSKTELYIG 163 (282)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEE
Confidence 66667778899999999999999999998887644
No 12
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=73.02 E-value=1.8 Score=38.17 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=42.2
Q ss_pred eeecCCccCCC---CHHHHHHHHHhcc-CCCceEEEeecc-------------------------------ccccccHHH
Q 022582 4 AAICGDVFASP---PVDSILAGIHAVT-GPMGCLLIVTNY-------------------------------TGDRLNFGL 48 (295)
Q Consensus 4 Aav~G~VFaSP---s~~qIl~ai~~v~-~~~GvL~iv~NY-------------------------------tGD~lNFgm 48 (295)
.+..||||-|. ...|+-+|++.+. .+.|||+....= ..|-=+||+
T Consensus 53 ec~tgDvfgs~rcdcg~qL~~Al~~I~~~G~GVlvyLrqegrgigL~~kl~ay~lqd~g~dt~~an~~lg~~~d~R~ygi 132 (196)
T 2bz1_A 53 ECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTL 132 (196)
T ss_dssp CCHHHHTSCCSSCSHHHHHHHHHHHHHHHTSEEEEEECCHHHHTCHHHHHHHHHHHHTTCCHHHHHHHTTCCSCCCCTHH
T ss_pred cCChHHHhCCCCCCChHHHHHHHHHHHHhCCEEEEEECCCCcchhHHHHHHHHhhhccCCcccccccccCCCCccccHHH
Confidence 46689999997 4669999999987 477999887421 125568888
Q ss_pred HHHHHHhcCCc
Q 022582 49 AAEQAKSEGYK 59 (295)
Q Consensus 49 A~E~A~~~Gi~ 59 (295)
+++..+.-|++
T Consensus 133 gAqIL~dLGV~ 143 (196)
T 2bz1_A 133 CADMFKLLGVN 143 (196)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 88888887775
No 13
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=71.22 E-value=6.7 Score=31.97 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=51.8
Q ss_pred CHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHh
Q 022582 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAG 94 (295)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv~KiaG 94 (295)
..++|.++|+.++ +.|||+++== -|=.+|-.++.++.+ -+|+.+ | .| +|....-
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggsp~N~~~al~~~~---~~v~vi----N--lP---------------mvega~~ 98 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSARMNLDLVSEMTD---KELTIF----N--VP---------------LIEGAYT 98 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGGHHHHHHHHHTCS---SEEEEC----C--SC---------------HHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCChHHHHHHHHhcC---CCEEEE----E--hh---------------HHHHHHH
Confidence 4788999999988 6899998744 666677777766432 255544 2 22 3433333
Q ss_pred H--HHHcCCCHHHHHHHHHHHHhhhc
Q 022582 95 A--AAAAGLSLADVAAEAKRASEMVG 118 (295)
Q Consensus 95 A--aAe~G~~L~ev~~~a~~~~~~~~ 118 (295)
| .+..|.+++|+.+-+.....+-|
T Consensus 99 aa~~~~~~~~l~el~~~~~~~~~~~~ 124 (131)
T 3ct6_A 99 ASALLEAGATFEAIKEQLEKMLIEKR 124 (131)
T ss_dssp HHHHHHTTCCHHHHHHHHGGGCCCCC
T ss_pred HHHHhhcCCCHHHHHHHHHHHHhCcc
Confidence 2 35679999999888877655544
No 14
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=71.09 E-value=23 Score=28.55 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=48.3
Q ss_pred HHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHhHH
Q 022582 17 DSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAA 96 (295)
Q Consensus 17 ~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv~KiaGAa 96 (295)
+++.++++.++.++|||+++== |=-.||. ....+..+.++++| +=+. +-++.+++ -.
T Consensus 49 ~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a--~~l~~~~~~~v~vI---~gvn---------------lpmllea~-~~ 105 (130)
T 3gx1_A 49 EKLKQTVVKLNPVKGVLILSDM--GSLTSFG--NILTEELGIRTKTV---TMVS---------------TPVVLEAM-RK 105 (130)
T ss_dssp HHHHHHHHTSCCTTCEEEEECS--GGGGTHH--HHHHHHHCCCEEEE---CSCC---------------HHHHHHHH-HH
T ss_pred HHHHHHHHhhCCCCCEEEEEeC--CCHHHHH--HHHHHhcCCCEEEE---eCCC---------------HHHHHHHH-HH
Confidence 5566678888999999999932 6666653 33333336676654 1122 23444543 23
Q ss_pred HHcCCCHHHHHHHHHHHHhh
Q 022582 97 AAAGLSLADVAAEAKRASEM 116 (295)
Q Consensus 97 Ae~G~~L~ev~~~a~~~~~~ 116 (295)
+..+.+|+|+++.++....+
T Consensus 106 ~~~~~~l~el~~~~~~~~~~ 125 (130)
T 3gx1_A 106 ASLGRGLEDIYQSCEQLFEN 125 (130)
T ss_dssp HHTTCCHHHHHHHHHHHHHH
T ss_pred hhcCCCHHHHHHHHHHHHHH
Confidence 45566999999888776544
No 15
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=69.49 E-value=6.8 Score=35.66 Aligned_cols=196 Identities=14% Similarity=-0.014 Sum_probs=108.4
Q ss_pred CCHHHHHHHHHh-ccC--CCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhh
Q 022582 14 PPVDSILAGIHA-VTG--PMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (295)
Q Consensus 14 Ps~~qIl~ai~~-v~~--~~GvL~iv--~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvl 88 (295)
||+.++.+..+. ... ...||+|- ..-+|=.=+.-+|+++.. +.+ |.|=| -|..-.|.-+
T Consensus 45 ps~~~~~~~f~~~~~~~~~d~Ii~I~iSs~LSGTy~sA~~aa~~~~--~~~---I~ViD-----------S~~~s~g~g~ 108 (277)
T 3egl_A 45 LSSLELAASYARQLERGGDDGVLALHISXELSSTWSAAVTAAAVFD--DDS---VRVVD-----------TSSLGMAVGA 108 (277)
T ss_dssp CCHHHHHHHHHHHHHHTTTSCEEEECSCTTTCSHHHHHHHHHTTSS--TTS---EEEEC-----------CSCCTHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCcEEEEEeCcchhhhhHHHHHHHHhCC--CCC---EEEEC-----------CCchhHHHHH
Confidence 999999999864 332 25688774 334554434444443321 223 22223 1333456666
Q ss_pred HHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecc--c----cccCC----------CCCCCCcCCCeeEEeccccCC
Q 022582 89 VNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALS--V----CTLPG----------QVTSDRLGPGKMELGLGIHGE 152 (295)
Q Consensus 89 v~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals--~----c~~Pg----------~~~~f~L~~~emE~G~GIHGE 152 (295)
+..-|-.++++|.|++|+.+..++..+++++.=+-=+ . --+.. =+|-..+.+|+++
T Consensus 109 ~v~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~dG~l~-------- 180 (277)
T 3egl_A 109 AAMAAARMAXDGASLQECYDIAVDTLXRSETWIYLHRIDEIWXSGRISTATAMVSTALATRPIMRFNGGRME-------- 180 (277)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTEEEEEECSCSHHHHHTTCSCTTTCSSGGGGCSSCEEEEETTEEE--------
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhceEEEEcCCHHHHhhCCccchHHHHHhhccceEEEEEEeCCEEE--------
Confidence 7777788999999999999999999998876533110 0 00111 0121222223222
Q ss_pred CCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC--eEEEeeee
Q 022582 153 PGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL--AVERVYTG 230 (295)
Q Consensus 153 pG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi--~v~r~~vG 230 (295)
...+..+.+..++.|++.+.+. . ..++..+.+.+. +. .|. +.++.+.|+++++. ++.-..+|
T Consensus 181 ---~~~KvRg~kka~~~l~~~~~~~----~--~~~~~~i~i~h~-~~---~e~---a~~l~~~l~~~~~~~~~i~i~~ig 244 (277)
T 3egl_A 181 ---IAAXTRTQSXAFAXLVELAQIR----A--DGEPVFIAIGQN-EA---REA---AXQLEELLRNALPEGSSFMSVDID 244 (277)
T ss_dssp ---EEECCCSHHHHHHHHHHHHHHH----H--TTSCCEEEEEEE-SC---HHH---HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred ---EEEecCChhHHHHHHHHHHHHH----h--CCCCEEEEEEeC-CC---HHH---HHHHHHHHHHhcCCCceEEEEEEc
Confidence 2356666777778888887653 2 122223333332 22 232 34556666776653 56666677
Q ss_pred cccccc-CCCcceEEEeccc
Q 022582 231 SFMTSL-DMAGFSISIMKAD 249 (295)
Q Consensus 231 ~~~TSl-dm~GfSiTLl~ld 249 (295)
+-+.+= +-..+.|..++-+
T Consensus 245 ~vIg~H~Gpg~igi~~~~~~ 264 (277)
T 3egl_A 245 PTLAVHSGPGAVSVSAVFAN 264 (277)
T ss_dssp HHHHHHHCTTEEEEEEECSS
T ss_pred cEEEEEeCCCeEEEEEEECC
Confidence 666543 4444667766543
No 16
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=67.04 E-value=10 Score=30.72 Aligned_cols=77 Identities=21% Similarity=0.214 Sum_probs=51.3
Q ss_pred CHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhc-CCcEEEEEecccccCCCCCCCCCcccccchhhHHHHH
Q 022582 15 PVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (295)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~-Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv~Kia 93 (295)
...+|.++|+.++.+.|||+++== -|=.+|-.+|.+....+ .-+|+.+ ..| +|.+..
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp~N~~~~~~~~~~~~~~~v~vv------NlP---------------mv~~~l 107 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAVLSSELAFDMLEEDQQKHYHLV------DAP---------------LVEGAF 107 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHHHHHHHHHHHSCHHHHTTEEEC------CSC---------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCChhHHHHHHHHhcccccCCEEEE------EHH---------------HHHHHH
Confidence 478999999999999999998833 55556766777765432 1255553 221 555554
Q ss_pred hH--HHHcCCCHHHHHHHHHHH
Q 022582 94 GA--AAAAGLSLADVAAEAKRA 113 (295)
Q Consensus 94 GA--aAe~G~~L~ev~~~a~~~ 113 (295)
-| .+..|.+++|+.+.+...
T Consensus 108 ~aa~~~~~~~~l~el~~~a~~~ 129 (135)
T 3b48_A 108 ASAITAGVSDDLTQILAEAQNA 129 (135)
T ss_dssp HHHHHHC-CCCHHHHHHHHHTC
T ss_pred HHHHHhhcCCCHHHHHHHHHHH
Confidence 43 345699999998877653
No 17
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=63.26 E-value=11 Score=34.18 Aligned_cols=195 Identities=11% Similarity=0.073 Sum_probs=104.9
Q ss_pred CCCCHHHHHHHHHhccC-C-CceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 022582 12 ASPPVDSILAGIHAVTG-P-MGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (295)
Q Consensus 12 aSPs~~qIl~ai~~v~~-~-~GvL~iv--~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtv 87 (295)
+.||+.++.++.+.... + ..||+|- ..-+|=.=+.-+|+|+. .+.+ |.|=| -|..-.|.-
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~--~~~~---I~ViD-----------S~~~s~g~g 128 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEH--PNLT---IAFPD-----------TKITSAPQG 128 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHC--TTSE---EECCC-----------CCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhC--CCCC---EEEEc-----------CCchHHHHH
Confidence 45899999999977643 4 4577764 34455433333343321 2322 22222 234455666
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeecccc----------------ccCCCCCCCCcC-CCeeEEecccc
Q 022582 88 LVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVC----------------TLPGQVTSDRLG-PGKMELGLGIH 150 (295)
Q Consensus 88 lv~KiaGAaAe~G~~L~ev~~~a~~~~~~~~Tigvals~c----------------~~Pg~~~~f~L~-~~emE~G~GIH 150 (295)
++..-|-.++++|.|++|+.+..++..+++++.=+-=+== ++=.=+|-.++. +|+++
T Consensus 129 ~~v~~A~~l~~~G~s~eeI~~~l~~~~~~~~~~f~v~~L~~L~kGGRis~~~a~ig~lL~IKPIl~~~~~G~l~------ 202 (285)
T 3lup_A 129 NLVRNALMCSREGMDFDVIVNKIQSQIEKIEGFIVVNDLNHLVKGGRLSNGSAIIGNLLSIKPVLHFNEEGKIV------ 202 (285)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTTCEEEEECSCTHHHHHHTCBTTHHHHHHHHTTSCCEEEECTTSCEE------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHhhcEEEEEECChHHHhhCCCccHHHHHHHHhhCcEEEEEEccCceEE------
Confidence 6777777899999999999999999998877653311000 000112333443 44443
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcC-CeEEEeee
Q 022582 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHG-LAVERVYT 229 (295)
Q Consensus 151 GEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~g-i~v~r~~v 229 (295)
...+..+.+..++.|++.+.+. .. . ++..+.+... + . . |. +.++.+.|++++. .++....+
T Consensus 203 -----~~~KvRg~kka~~~l~~~~~~~----~~-~-~~~~v~i~h~-~-~-~-e~---a~~l~~~l~~~~~~~~i~i~~i 264 (285)
T 3lup_A 203 -----VYEKVRTEKKALKRLAEIVKEM----TA-D-GEYDIAIIHS-R-A-Q-DK---AEQLYNLLAKAGLKDDLEIVSF 264 (285)
T ss_dssp -----EEECCSSHHHHHHHHHHHHHHH----GG-G-SCEEEEEEES-S-C-H-HH---HHHHHHHHHHTTCGGGEEEEEC
T ss_pred -----EeeecCCHHHHHHHHHHHHHHh----hc-C-CCcEEEEEeC-C-C-H-HH---HHHHHHHHHhhCCCCeEEEEEE
Confidence 2355566667778888777653 22 1 2222333432 2 2 2 32 2345566666543 34555666
Q ss_pred eccccccCCC-cceEEEe
Q 022582 230 GSFMTSLDMA-GFSISIM 246 (295)
Q Consensus 230 G~~~TSldm~-GfSiTLl 246 (295)
|+-+.+==.+ .+.|..+
T Consensus 265 g~vig~H~Gpg~igi~~~ 282 (285)
T 3lup_A 265 GGVIATHLGEGAVAFGIT 282 (285)
T ss_dssp CHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEecCCeEEEEEE
Confidence 6655443333 3445444
No 18
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=59.81 E-value=50 Score=30.51 Aligned_cols=185 Identities=12% Similarity=0.092 Sum_probs=99.1
Q ss_pred CCCCHHHHHHHHHhcc-CCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhh
Q 022582 12 ASPPVDSILAGIHAVT-GPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTIL 88 (295)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvl 88 (295)
+.||+.++.++.+.+. ....||+|- ..-+|=.=+.-+|+++. .+.+ +.+| | -|..-.|.-+
T Consensus 96 SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~LSGTy~sA~~Aa~~~--~~~~--I~Vi-D-----------S~~~s~g~g~ 159 (315)
T 3fys_A 96 SQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMV--DNID--VYPF-D-----------SEISCLAQGF 159 (315)
T ss_dssp ECCCHHHHHHHHHHHTTTCSEEEEEESCTTTCSHHHHHHHGGGGC--SSCE--EEEE-E-----------CSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEeCCCcHhHHHHHHHHHHHhC--CCCC--EEEE-C-----------CchhHHHHHH
Confidence 4589999999997764 456677775 33444333333333221 2322 2222 2 1333455566
Q ss_pred HHHHHhHHHHcCC-CHHHHHHHHHHHHhhhccceeeccc----------------cccCCCCCCCCcCCCeeEEeccccC
Q 022582 89 VNKIAGAAAAAGL-SLADVAAEAKRASEMVGTMGVALSV----------------CTLPGQVTSDRLGPGKMELGLGIHG 151 (295)
Q Consensus 89 v~KiaGAaAe~G~-~L~ev~~~a~~~~~~~~Tigvals~----------------c~~Pg~~~~f~L~~~emE~G~GIHG 151 (295)
+..-|-.++++|. |++||++..++..+++++.=+-=+= .++=.=+|-..+.+|+++
T Consensus 160 lv~~Aa~l~~~G~~s~eeI~~~l~~~~~~~~~~f~v~~L~yL~kGGRIs~~~a~ig~lL~IKPIl~~~dG~l~------- 232 (315)
T 3fys_A 160 YALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIV------- 232 (315)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTTTCEEEEECSCTHHHHHHTTTHHHHHHHSSCCCSCEEEEEETTEEE-------
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHhccEEEEEECchHHHHhCCcchHHHHHHHhhcCcEEEEEEECCEEE-------
Confidence 6667778999999 9999999999999887765331000 000001222333333332
Q ss_pred CCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCC-eEEEeeee
Q 022582 152 EPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGL-AVERVYTG 230 (295)
Q Consensus 152 EpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi-~v~r~~vG 230 (295)
...+..+.+..++.|++.+.+. .. ...+..+.+... + . .|. +.++.+.|+++++. ++.-..+|
T Consensus 233 ----~~~KvRg~kka~~~l~~~~~~~----~~-~~~~~~v~I~h~-~-~--~e~---a~~l~~~l~~~~~~~~i~i~~ig 296 (315)
T 3fys_A 233 ----PFEKIRTRKKAISRIYELLDED----AS-KGLPMRAAVIHA-N-R--EEE---AAKIIEELSAKYPHVEFYNSYFG 296 (315)
T ss_dssp ----EEEECSCHHHHHHHHHHHHHHH----HT-TCCCEEEEEEES-S-C--HHH---HHHHHHHHHHHCTTEEEEEEECC
T ss_pred ----EEeeeccHHHHHHHHHHHHHHH----hh-cCCCcEEEEEec-C-C--HHH---HHHHHHHHHHhCCCCcEEEEEEc
Confidence 2355566667778888777653 11 112233334432 2 2 232 34556666776654 34445566
Q ss_pred ccccc
Q 022582 231 SFMTS 235 (295)
Q Consensus 231 ~~~TS 235 (295)
.-+.+
T Consensus 297 ~vIg~ 301 (315)
T 3fys_A 297 AVIGT 301 (315)
T ss_dssp HHHHH
T ss_pred cEEEE
Confidence 55543
No 19
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=54.96 E-value=24 Score=32.70 Aligned_cols=94 Identities=13% Similarity=0.142 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHhcc-CCC-ceEEEee--ccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchh
Q 022582 12 ASPPVDSILAGIHAVT-GPM-GCLLIVT--NYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTI 87 (295)
Q Consensus 12 aSPs~~qIl~ai~~v~-~~~-GvL~iv~--NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtv 87 (295)
+.||+.++.++.+.+. .+. .||+|-- .-+|=.=+.-+|+++. +.+ +.+| |- +..-.|.-
T Consensus 89 SqPs~~~~~e~f~~l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~---~~~--I~Vi-DS-----------~~~s~g~g 151 (313)
T 1mgp_A 89 SQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEV---DIP--VYVV-DT-----------LLASGAIP 151 (313)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEEEESCTTTCSHHHHHHHHHHHS---SSC--EEEE-EC-----------SCCGGGTH
T ss_pred CCcCHHHHHHHHHHHHHcCCCeEEEEECCccHhHHHHHHHHHHhcC---CCe--EEEE-eC-----------CcchHHHH
Confidence 4589999999997763 333 5777642 2234333344444432 222 2222 31 22334555
Q ss_pred hHHHHHhHHHHcCCCHHHHHHHHHHHHh--hhcccee
Q 022582 88 LVNKIAGAAAAAGLSLADVAAEAKRASE--MVGTMGV 122 (295)
Q Consensus 88 lv~KiaGAaAe~G~~L~ev~~~a~~~~~--~~~Tigv 122 (295)
++..-|-.++++|.|++||++..++..+ ++++.=+
T Consensus 152 ~lv~~Aa~l~~~G~s~eeI~~~l~~~~~~~~~~~~f~ 188 (313)
T 1mgp_A 152 LPARVAREMLENGATIEEVLKKLDERMKNKDFKAIFY 188 (313)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhhCceEEEEE
Confidence 6666677889999999999999999999 8776543
No 20
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=44.02 E-value=62 Score=28.89 Aligned_cols=60 Identities=12% Similarity=0.213 Sum_probs=37.8
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhc-CCeEEE
Q 022582 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEH-GLAVER 226 (295)
Q Consensus 151 GEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~-gi~v~r 226 (295)
+=||.-.....+...++..+++.|.. .|=+=+|+||+=||-. +-.+++++. .++ ++.+..
T Consensus 83 ~fPGTisl~~~tl~~~l~di~~sl~~---------~G~rrlvivNgHGGN~---l~~a~~~l~----~~~~~~~v~~ 143 (254)
T 3lub_A 83 ELPFCIHTRYATQQAILEDIVSSLHV---------QGFRKLLILSGHGGNN---FKGMIRDLA----FEYPDFLIAA 143 (254)
T ss_dssp TSTTCCBCCHHHHHHHHHHHHHHHHH---------TTCCEEEEEESCTTCC---CHHHHHHHH----HHCTTCEEEE
T ss_pred CcCCeEEeCHHHHHHHHHHHHHHHHH---------cCCCEEEEEeCCchHH---HHHHHHHHH----HHCCCcEEEE
Confidence 45786555555555666666666643 3666799999999987 444555554 444 666553
No 21
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=40.02 E-value=15 Score=28.40 Aligned_cols=42 Identities=12% Similarity=0.067 Sum_probs=36.7
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 189 ~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
-..+-|..+|+.+.-+---+.+.+.+.|++++||...|+|+=
T Consensus 56 ~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~ 97 (114)
T 3djh_A 56 CALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYIN 97 (114)
T ss_dssp CEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred EEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 356778889999987778899999999999999999999984
No 22
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=39.52 E-value=1e+02 Score=23.75 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=39.1
Q ss_pred ceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEec
Q 022582 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVG 66 (295)
Q Consensus 3 dAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~ 66 (295)
|.+++..+ ....+++..++.+ +.|.|++......+ +.-..+..+..|.+++.+-+.
T Consensus 102 D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~ 157 (183)
T 2yxd_A 102 NKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDAVNVF 157 (183)
T ss_dssp SEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEEEEee
Confidence 45555555 6778888888887 88888887643332 445677778889888877543
No 23
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=38.96 E-value=50 Score=25.63 Aligned_cols=50 Identities=18% Similarity=0.362 Sum_probs=32.5
Q ss_pred cCCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHH
Q 022582 150 HGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKA 212 (295)
Q Consensus 150 HGEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v 212 (295)
|+=||.....-.+..++ +.++..+. ..|...+|+||| .|+-...-+-+++
T Consensus 24 hnypgryirtatssqdi-rdiiksmk---------dngkplvvfvng---asqndvnefqnea 73 (112)
T 2lnd_A 24 HNYPGRYIRTATSSQDI-RDIIKSMK---------DNGKPLVVFVNG---ASQNDVNEFQNEA 73 (112)
T ss_dssp HHSCTTTEEEECSHHHH-HHHHHHHT---------TCCSCEEEEECS---CCHHHHHHHHHHH
T ss_pred cCCCCceeeeccchhhH-HHHHHHHH---------hcCCeEEEEecC---cccccHHHHHHHH
Confidence 88899876666677666 44444443 358899999994 5555544444444
No 24
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.76 E-value=45 Score=27.14 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=45.6
Q ss_pred HHHHHHHHHh--ccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHH
Q 022582 16 VDSILAGIHA--VTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIA 93 (295)
Q Consensus 16 ~~qIl~ai~~--v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv~Kia 93 (295)
.+++.++++. ++.++|||+++== |=-.||. ....+..+.++++| +=+. +-++.+++
T Consensus 48 ~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a--~~l~~~~~~~v~vI---~gvn---------------lpmllea~ 105 (139)
T 3gdw_A 48 YEQLRNQVITQKESLNNGILLLTDM--GSLNSFG--NMLFEETGIRTKAI---TMTS---------------TMIVLEAI 105 (139)
T ss_dssp HHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHH--HHHHHHHCCCEEEE---CSCC---------------HHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHH--HHHHHhhCCCEEEE---eCCC---------------HHHHHHHH
Confidence 3556667777 7789999999932 5555653 33333336676654 1122 23455544
Q ss_pred hHHHHcCCCHHHHHHHHH
Q 022582 94 GAAAAAGLSLADVAAEAK 111 (295)
Q Consensus 94 GAaAe~G~~L~ev~~~a~ 111 (295)
-.+..+.+|+|+++.++
T Consensus 106 -~~~~~~~~L~el~~~~~ 122 (139)
T 3gdw_A 106 -RMASVGRSLEDIYQNIQ 122 (139)
T ss_dssp -HHHHTTCCHHHHHHHHH
T ss_pred -HHhhcCCCHHHHHHHHH
Confidence 33457999999999884
No 25
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=37.52 E-value=20 Score=27.40 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=36.7
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|..+|+.+.-+.--+++.+.+.|++.+|+...|+||=
T Consensus 56 ~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 1uiz_A 56 PCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYIN 98 (115)
T ss_dssp SCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3456678889999988888999999999999889999988873
No 26
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=36.18 E-value=20 Score=27.43 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=36.8
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|...|+.+.-+.--+++.+.+.|++.+|+...|+|+=
T Consensus 56 ~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 56 PVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp SCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3456778889999988888999999999999889999998874
No 27
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=35.75 E-value=16 Score=28.14 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=36.2
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 189 ~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
-..+-|..+|+.+.-.---+.+.+.+.|++++|+...|+|+=
T Consensus 57 ~a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI~ 98 (114)
T 4dh4_A 57 CAFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYTT 98 (114)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 366778889999997777899999999999999999999873
No 28
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=34.43 E-value=21 Score=27.19 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=36.6
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|..+|+.+.-+.--+++.+.+.|++.+|+...|+||=
T Consensus 55 ~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 97 (113)
T 1hfo_A 55 PAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIH 97 (113)
T ss_dssp SCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 3356678889999988888999999999999889999988873
No 29
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=33.48 E-value=19 Score=28.98 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=37.1
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+-|..+|+.+.-+---+++.+.+.|++++||...|+|+-
T Consensus 77 P~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 77 PVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp SCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 3466778889999887777899999999999999999999984
No 30
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=33.33 E-value=30 Score=26.74 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=37.1
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|..+|+.+.-+.--+++++.+.|++.+|+...|+|+=
T Consensus 56 ~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (119)
T 2os5_A 56 PVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIIT 98 (119)
T ss_dssp SCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 4466778889999988888999999999999889999988873
No 31
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=32.07 E-value=1.5e+02 Score=24.23 Aligned_cols=92 Identities=7% Similarity=0.080 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHccc---------CCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeee--e
Q 022582 162 PVDVVVSHVLKQILSTE---------TNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYT--G 230 (295)
Q Consensus 162 ~a~~lv~~ml~~ll~~~---------~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~v--G 230 (295)
+..++++.+.+.|-+.+ +....+ -.+.|+.+ |+|.=-...+++++.+.|++. |+++.++-- .
T Consensus 2 ~~~~l~~~i~~al~dkKa~DI~vlDv~~~s~~---~DyfVIaT---g~S~rqv~Aiad~v~~~lk~~-g~~~~~~EG~~~ 74 (130)
T 2id1_A 2 EIQEISKLAIEALEDIKGKDIIELDTSKLTSL---FQRMIVAT---GDSNRQVKALANSVQVKLKEA-GVDIVGSEGHES 74 (130)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEEGGGTCSS---CSEEEEEE---CSSHHHHHHHHHHHHHHHHHT-TCCCCBCCSTTT
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEcCCCCcc---cCEEEEEE---cCCHHHHHHHHHHHHHHHHHc-CCcCccccCCCC
Confidence 45678888777775543 111111 24778888 778888999999999999988 987665421 1
Q ss_pred ccccccCCCcceEEEecccH----HHHHhh--cCCC
Q 022582 231 SFMTSLDMAGFSISIMKADE----VILKHL--DATT 260 (295)
Q Consensus 231 ~~~TSldm~GfSiTLl~ldd----~l~~ll--dap~ 260 (295)
.-=.-+|..-+-|-++.=+. +|.+|| |+|.
T Consensus 75 ~~WvLlD~GdVvVHIf~~e~RefY~LE~LW~~da~~ 110 (130)
T 2id1_A 75 GEWVLVDAGDVVVHVMLPAVRDYYDIEALWGGQKPS 110 (130)
T ss_dssp SSEEEEEETTEEEEEECHHHHHHHCHHHHTTCCCCC
T ss_pred CCEEEEecCCEEEEcCCHHHHhHcCHHHHhcCCCcc
Confidence 12234555555555554332 488999 6664
No 32
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=28.84 E-value=25 Score=26.93 Aligned_cols=43 Identities=14% Similarity=0.284 Sum_probs=36.4
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|..+|+.+.-+.--+++++.+.|++.+|+...|+||=
T Consensus 56 ~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 2xcz_A 56 PTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIG 98 (115)
T ss_dssp SCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred cEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 3456667789989988888999999999999889999988873
No 33
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=28.74 E-value=19 Score=28.97 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=35.7
Q ss_pred eEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 189 RVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 189 ~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
-+.+-|..+|+.+.-+---+++.+.+.|++++||...|+|+=
T Consensus 78 ~a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 78 AAYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp CEEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 356667777888887778899999999999999999999984
No 34
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=28.47 E-value=55 Score=26.57 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=24.5
Q ss_pred eecCCccCCC-CHHHHHHHHHhccC-CCceEEEeecccc
Q 022582 5 AICGDVFASP-PVDSILAGIHAVTG-PMGCLLIVTNYTG 41 (295)
Q Consensus 5 av~G~VFaSP-s~~qIl~ai~~v~~-~~GvL~iv~NYtG 41 (295)
.++||+|-.. +.++..+.++.+.. +..+++|.+|+--
T Consensus 37 i~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~ 75 (228)
T 1uf3_A 37 ALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDA 75 (228)
T ss_dssp EEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSC
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCc
Confidence 4689998765 66655445544432 4569999999953
No 35
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=28.01 E-value=31 Score=30.97 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=27.0
Q ss_pred eecCC-cc--CCCCHHH---HHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcC
Q 022582 5 AICGD-VF--ASPPVDS---ILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEG 57 (295)
Q Consensus 5 av~G~-VF--aSPs~~q---Il~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~G 57 (295)
.++|| +| ..|+... +.+.++.+.....|++|.+|+--..+ +...+..+..|
T Consensus 66 liaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~~--~~~~~~l~~~g 122 (336)
T 2q8u_A 66 LLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNHDWKGL--KLFGNFVTSIS 122 (336)
T ss_dssp EEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSCEEECCC------C--HHHHHHHHHHC
T ss_pred EECCccccCCCCCCHHHHHHHHHHHHHHHhcCCEEEECCCCCcccc--ccHHHHHHhcC
Confidence 46999 99 4455543 44555554322679999999965543 33344555555
No 36
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=26.75 E-value=19 Score=29.13 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=32.9
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+-|..+|+.+.-+---+++.+.+.|++++||...|+|+=
T Consensus 77 p~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI~ 119 (135)
T 3t5s_A 77 LCCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYIS 119 (135)
T ss_dssp SCEEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred eEEEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEEE
Confidence 3467778899999888778899999999999999999999984
No 37
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=26.67 E-value=65 Score=26.42 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=28.3
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEe
Q 022582 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERV 227 (295)
Q Consensus 186 ~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~ 227 (295)
....++|++.|+|+.+.. ++.+.+.|.++ |+.|...
T Consensus 44 ~~~p~vv~~hG~~~~~~~-----~~~~~~~l~~~-g~~v~~~ 79 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGT-----WERTIDVLADA-GYRVIAV 79 (315)
T ss_dssp CCSCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEEE
T ss_pred CCCCeEEEEcCCCCcchH-----HHHHHHHHHHC-CCeEEEe
Confidence 345789999999998864 55777888888 8887754
No 38
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=26.32 E-value=83 Score=25.67 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=27.5
Q ss_pred HHHHHhccCCCceEEEeeccccccccHHHHHHHHHhc-CCcEEEEE
Q 022582 20 LAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSE-GYKVEIVI 64 (295)
Q Consensus 20 l~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~-Gi~v~~vi 64 (295)
++++..++.- -+++|+ |||- .|--++++++++ |.+|..+-
T Consensus 100 iD~~~~a~~~-d~~vLv---SgD~-DF~plv~~lr~~~G~~V~v~g 140 (165)
T 2qip_A 100 LDAIEIAPDV-DRVILV---SGDG-DFSLLVERIQQRYNKKVTVYG 140 (165)
T ss_dssp HHHHHHGGGC-SEEEEE---CCCG-GGHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHhhccC-CEEEEE---ECCh-hHHHHHHHHHHHcCcEEEEEe
Confidence 4455554333 455555 7787 899999999997 98886554
No 39
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=25.32 E-value=26 Score=27.48 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=32.2
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeee
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTG 230 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG 230 (295)
+-+.+=|..+|+.+.-+.--+++++.+.|.+.+|+...|+||=
T Consensus 56 p~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (125)
T 2wkb_A 56 GYCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIE 98 (125)
T ss_dssp SCEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3456778889999988888999999999999889999988873
No 40
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=24.85 E-value=81 Score=24.49 Aligned_cols=51 Identities=25% Similarity=0.215 Sum_probs=28.9
Q ss_pred ccCCCCH---HHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEE
Q 022582 10 VFASPPV---DSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVI 64 (295)
Q Consensus 10 VFaSPs~---~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~vi 64 (295)
++-||.. +.+++.|+.+. --++|..-|-.|. .+--|...|.+.|++|++++
T Consensus 7 ~~f~p~~~~~~~~~~~i~~A~---~~I~i~~~~~~~~-~i~~aL~~a~~rGV~Vril~ 60 (155)
T 1byr_A 7 VGYSPEGSARVLVLSAIDSAK---TSIRMMAYSFTAP-DIMKALVAAKKRGVDVKIVI 60 (155)
T ss_dssp EEEETTTHHHHHHHHHHHHCS---SEEEEEESSBCCH-HHHHHHHHHHHTTCEEEEEE
T ss_pred EEECCCCcHHHHHHHHHHHHh---hEEEEEEEEeCCH-HHHHHHHHHHHCCCEEEEEE
Confidence 4456653 34455555544 3566665555441 23344555667899998765
No 41
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=24.68 E-value=2.2e+02 Score=25.70 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=36.5
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhh
Q 022582 151 GEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNL 216 (295)
Q Consensus 151 GEpG~~r~~~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L 216 (295)
+=||.-.....+...++..+++.|.. .|=+-+|+||+=||-... +..+++++.+.+
T Consensus 92 ~fpGTisl~~~t~~~~l~di~~sl~~---------~G~~~iv~vNgHGGN~~~-l~~a~~el~~~~ 147 (267)
T 3no4_A 92 AFPGTISLRPSTLIQVVRDYVTCLAK---------AGFSKFYFINGHGGNIAT-LKAAFSETYAHL 147 (267)
T ss_dssp TSTTCBCCCHHHHHHHHHHHHHHHHH---------HTCCEEEEEECCTTHHHH-HHHHHHHHHHHH
T ss_pred CCCCeEEeCHHHHHHHHHHHHHHHHH---------cCCCEEEEEECCcCcHHH-HHHHHHHHHHHh
Confidence 35886655555556666666666654 366679999999996542 445666666554
No 42
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.47 E-value=71 Score=27.12 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=25.6
Q ss_pred CeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEE
Q 022582 188 NRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVER 226 (295)
Q Consensus 188 d~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r 226 (295)
..-|||+-|+|+++.. ++.+.++|.++ |+.|..
T Consensus 51 ~~~VlllHG~~~s~~~-----~~~la~~La~~-Gy~Via 83 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQS-----MRFLAEGFARA-GYTVAT 83 (281)
T ss_dssp SEEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEE
T ss_pred CceEEEECCCCCCHHH-----HHHHHHHHHHC-CCEEEE
Confidence 3348999999998753 45677889888 998874
No 43
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=23.57 E-value=65 Score=29.22 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=33.1
Q ss_pred HHHHHHHhccCCCceEEEeecc---ccc----cccHHHHHHHHHhcCCcEEEEEecccc
Q 022582 18 SILAGIHAVTGPMGCLLIVTNY---TGD----RLNFGLAAEQAKSEGYKVEIVIVGDDC 69 (295)
Q Consensus 18 qIl~ai~~v~~~~GvL~iv~NY---tGD----~lNFgmA~E~A~~~Gi~v~~viV~DDv 69 (295)
+++..++.+-.+.|+|+|.--. .|- ..++.+..+..+..|.+..-.+|.+--
T Consensus 65 ~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~~iiW~k~ 123 (323)
T 1boo_A 65 SFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNP 123 (323)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEEEEEEECS
T ss_pred HHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEEEEEEEEecC
Confidence 3444444455678998886332 232 346777778788889887766776543
No 44
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=23.24 E-value=1.7e+02 Score=25.77 Aligned_cols=52 Identities=10% Similarity=0.069 Sum_probs=34.8
Q ss_pred CHHHHHHHHHhccCCCceEEEeecc---ccccccHHHHHHHHHhcCCcEEEEEecccccC
Q 022582 15 PVDSILAGIHAVTGPMGCLLIVTNY---TGDRLNFGLAAEQAKSEGYKVEIVIVGDDCAL 71 (295)
Q Consensus 15 s~~qIl~ai~~v~~~~GvL~iv~NY---tGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~ 71 (295)
..+++-++++...... .++++.|. ||.+++..--.+.|++.|+ .+|-|++-.
T Consensus 154 d~~~l~~~l~~~~~~~-~~v~~~~~~nptG~~~~l~~i~~l~~~~~~----~li~De~~~ 208 (384)
T 1bs0_A 154 DVTHLARLLASPCPGQ-QMVVTEGVFSMDGDSAPLAEIQQVTQQHNG----WLMVDDAHG 208 (384)
T ss_dssp CHHHHHHHHHSCCSSC-EEEEEESBCTTTCCBCCHHHHHHHHHHTTC----EEEEECTTT
T ss_pred CHHHHHHHHHhcCCCC-eEEEEeCCCCCCCCccCHHHHHHHHHHcCc----EEEEECCcc
Confidence 4566666665432223 55665556 9999998877888888774 566787753
No 45
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=23.00 E-value=99 Score=24.46 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=45.6
Q ss_pred HHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCcccccchhhHHHHHhH
Q 022582 16 VDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGA 95 (295)
Q Consensus 16 ~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~~~~~~~~gRRGlAGtvlv~KiaGA 95 (295)
.+++.++++.++.++|||+++==|-|=..|+ |.+..+. ..+++.| + -+.. -++..++ .
T Consensus 45 ~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~--a~~~~~~-~~~v~vi--~-GvNl---------------pmlle~~-~ 102 (135)
T 1pdo_A 45 IEKYNAQLAKLDTTKGVLFLVDTWGGSPFNA--ASRIVVD-KEHYEVI--A-GVNI---------------PMLVETL-M 102 (135)
T ss_dssp HHHHHHHHTTSCCTTCEEEEESSTTSHHHHH--HHHHHTT-CTTEEEE--E-SCCH---------------HHHHHHH-H
T ss_pred HHHHHHHHHhcCCCCCEEEEEECCCCCHHHH--HHHHHhc-cCCEEEE--e-CCCH---------------HHHHHHH-H
Confidence 3456667777788889999984445555676 5555543 2245432 1 1221 2244433 2
Q ss_pred HHHcCCCHHHHHHHHHHHHh
Q 022582 96 AAAAGLSLADVAAEAKRASE 115 (295)
Q Consensus 96 aAe~G~~L~ev~~~a~~~~~ 115 (295)
.+..+.+++|+.+.+.....
T Consensus 103 ~~~~~~~l~el~~~~~~~g~ 122 (135)
T 1pdo_A 103 ARDDDPSFDELVALAVETGR 122 (135)
T ss_dssp HHTTCCCHHHHHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHHhh
Confidence 34458999999876666543
No 46
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=22.72 E-value=1.6e+02 Score=25.57 Aligned_cols=53 Identities=13% Similarity=0.050 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHhccCCCceEEEe--eccccccccHHHHHHHHHhcCCcEEEEEecccccC
Q 022582 14 PPVDSILAGIHAVTGPMGCLLIV--TNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCAL 71 (295)
Q Consensus 14 Ps~~qIl~ai~~v~~~~GvL~iv--~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~ 71 (295)
++++++.++++.-...+ ++++. .|.||.++...--++.|++.|+ .++-|++-.
T Consensus 132 ~d~~~l~~~l~~~~~~~-~v~~~~~~nptG~~~~l~~i~~l~~~~~~----~li~D~a~~ 186 (386)
T 2dr1_A 132 VKPEDLDDALRKNPDVE-AVTITYNETSTGVLNPLPELAKVAKEHDK----LVFVDAVSA 186 (386)
T ss_dssp CCHHHHHHHHHHCTTCC-EEEEESEETTTTEECCHHHHHHHHHHTTC----EEEEECTTT
T ss_pred CCHHHHHHHHhcCCCCc-EEEEEeecCCcchhCCHHHHHHHHHHcCC----eEEEEcccc
Confidence 57788888886523333 44444 5779999998877888888774 456666643
No 47
>3w1s_C Ubiquitin-like protein ATG12; ubiquitin fold, E3-like, ATG3 binding, isopeptide bond betwe Gly186 and ATG5 Lys149, ligase; 2.60A {Saccharomyces cerevisiae S288C}
Probab=21.98 E-value=29 Score=26.79 Aligned_cols=32 Identities=16% Similarity=0.299 Sum_probs=21.2
Q ss_pred CCccCCCCHHHHHHHHHhccCCCceEEEeeccccc
Q 022582 8 GDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGD 42 (295)
Q Consensus 8 G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD 42 (295)
.+.|+ |++++.+..+=......|-|+| ||.+-
T Consensus 56 Nn~f~-Ps~d~~~~~Ly~~fk~dg~Lyv--~Ys~~ 87 (91)
T 3w1s_C 56 NNSFA-PSPQQNIGELWMQFKTNDELIV--SYCAS 87 (91)
T ss_dssp TTTBC-CCTTSBHHHHHHHHCBTTEEEE--EEEC-
T ss_pred CCccC-CCcccHHHHHHHHhCCCCEEEE--EEeCc
Confidence 45555 7877777776555556887777 78763
No 48
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=21.82 E-value=2.6e+02 Score=21.68 Aligned_cols=65 Identities=14% Similarity=0.278 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCC-hHHHHHH----HHHHHHHhhhhhcCCeEEEeeeecccc
Q 022582 160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGAT-PVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMT 234 (295)
Q Consensus 160 ~~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~t-s~lEl~i----~~~~v~~~L~~~~gi~v~r~~vG~~~T 234 (295)
++=-.++++.+.+.|++- .|.+|+++- +. ...|.+- -++++.+.|+.+ |+-..+.-.|+|++
T Consensus 13 ~PlY~QI~~~i~~~I~~G-----~l~pG~~LP-------ser~La~~~gVSr~tVReAl~~L~~e-Glv~~~~g~G~~V~ 79 (134)
T 4ham_A 13 LPIYEQIVQKIKEQVVKG-----VLQEGEKIL-------SIREFASRIGVNPNTVSKAYQELERQ-EVIITVKGKGTFIA 79 (134)
T ss_dssp SCHHHHHHHHHHHHHHHT-----SSCTTCEEC-------CHHHHHHHHTCCHHHHHHHHHHHHHT-TSEEEETTTEEEEC
T ss_pred CCHHHHHHHHHHHHHHcC-----CCCCCCCCc-------cHHHHHHHHCCCHHHHHHHHHHHHHC-CcEEEEcCcEEEEe
Confidence 333478999999999874 678999861 00 1122222 578999999999 99888888999997
Q ss_pred ccC
Q 022582 235 SLD 237 (295)
Q Consensus 235 Sld 237 (295)
...
T Consensus 80 ~~~ 82 (134)
T 4ham_A 80 NQT 82 (134)
T ss_dssp CCS
T ss_pred CCc
Confidence 643
No 49
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=21.66 E-value=1.1e+02 Score=24.27 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=27.7
Q ss_pred CCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEe
Q 022582 187 GNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERV 227 (295)
Q Consensus 187 gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~ 227 (295)
+.+.+|++.|+|+++.. ++.+.+.|.++ |+.|...
T Consensus 25 ~~~~vv~~hG~~~~~~~-----~~~~~~~l~~~-G~~v~~~ 59 (286)
T 3qit_A 25 EHPVVLCIHGILEQGLA-----WQEVALPLAAQ-GYRVVAP 59 (286)
T ss_dssp TSCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEEE
T ss_pred CCCEEEEECCCCcccch-----HHHHHHHhhhc-CeEEEEE
Confidence 45789999999998864 45677888888 8887754
No 50
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=21.52 E-value=71 Score=29.09 Aligned_cols=47 Identities=11% Similarity=-0.034 Sum_probs=30.8
Q ss_pred ccCCCCHHHHHHHHHhccC---CCceEEEeeccccccccHHHHHHHHHhcCCcEEEE
Q 022582 10 VFASPPVDSILAGIHAVTG---PMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIV 63 (295)
Q Consensus 10 VFaSPs~~qIl~ai~~v~~---~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~v 63 (295)
||.|++-....+-+.+... +.-+.+||.|... |.+.|++.||++..+
T Consensus 95 vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~-------~~~~A~~~gIp~~~~ 144 (286)
T 3n0v_A 95 IMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPD-------LEPLAHWHKIPYYHF 144 (286)
T ss_dssp EEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSST-------THHHHHHTTCCEEEC
T ss_pred EEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHH-------HHHHHHHcCCCEEEe
Confidence 5777775333333344333 3568899999865 456788889998765
No 51
>3sxy_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.65A {Thermotoga maritima} PDB: 3dbw_A 3fms_A*
Probab=21.19 E-value=2.4e+02 Score=23.41 Aligned_cols=63 Identities=22% Similarity=0.254 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHH----HHHHHHHhhhhhcCCeEEEeeeeccccccC
Q 022582 162 PVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMTSLD 237 (295)
Q Consensus 162 ~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i----~~~~v~~~L~~~~gi~v~r~~vG~~~TSld 237 (295)
-.+.+.+.+.+.|++ -.+.+|+++. .+ ...|.+- -+++++..|+.. |+-..+...|.|++.++
T Consensus 13 l~~~v~~~l~~~I~~-----g~l~pG~~L~--e~-----~La~~lgVSRtpVREAL~~L~~e-Glv~~~~~~G~~V~~~~ 79 (218)
T 3sxy_A 13 VRTKVYNLLKEMILN-----HELKLGEKLN--VR-----ELSEKLGISFTPVRDALLQLATE-GLVKVVPRVGFFVTDVD 79 (218)
T ss_dssp -CHHHHHHHHHHHHT-----TSSCTTCEEC--HH-----HHHHHHTCCHHHHHHHHHHHHHH-TSEEEETTTEEEECCCC
T ss_pred HHHHHHHHHHHHHHh-----CCCCCCCEeC--HH-----HHHHHHCCCHHHHHHHHHHHHHC-CCEEEeCCCceEEcCCC
Confidence 346788888889887 4678999851 11 2233333 578999999999 99888888999999865
No 52
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=20.81 E-value=90 Score=25.04 Aligned_cols=68 Identities=9% Similarity=-0.050 Sum_probs=0.0
Q ss_pred CCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCCCcceEEEecccHHHHHhhcC
Q 022582 185 TRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDA 258 (295)
Q Consensus 185 ~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm~GfSiTLl~ldd~l~~llda 258 (295)
.+..+.+|++.|+|+++.. ++.+.+.|.++ |++|...-.=-+=.|-.-..-..|+-..-+++.+++++
T Consensus 9 ~~~~~~vvllHG~~~~~~~-----~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~ 76 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAWC-----WYKIVALMRSS-GHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMAS 76 (267)
T ss_dssp -CCCCEEEEECCTTCCGGG-----GHHHHHHHHHT-TCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHT
T ss_pred CCCCCeEEEECCCCCCcch-----HHHHHHHHHhc-CCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHh
No 53
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=20.74 E-value=1.1e+02 Score=25.70 Aligned_cols=64 Identities=17% Similarity=0.228 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHH----HHHHHHHhhhhhcCCeEEEeeeecccccc
Q 022582 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMI----AAGKAVPNLQLEHGLAVERVYTGSFMTSL 236 (295)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i----~~~~v~~~L~~~~gi~v~r~~vG~~~TSl 236 (295)
.-.+.+.+.+.+.|++ -.+.+|+++- .+ ...|.+- -+|++++.|+.+ |+-..+...|.|++.+
T Consensus 16 ~~~~~v~~~l~~~I~~-----g~l~pG~~L~--E~-----~La~~lgVSRtpVREAl~~L~~e-Glv~~~~~~G~~V~~~ 82 (222)
T 3ihu_A 16 SASDTVFFGIMSGLEL-----GTFVPGQRLV--ET-----DLVAHFGVGRNSVREALQRLAAE-GIVDLQRHRGAVIRRL 82 (222)
T ss_dssp CHHHHHHHHHHHHHHH-----TSSCTTCEEC--HH-----HHHHHHTCCHHHHHHHHHHHHHT-TSEEECSTTCEEECCC
T ss_pred cHHHHHHHHHHHHHHh-----CCCCCCCccC--HH-----HHHHHHCCCHHHHHHHHHHHHHC-CCEEEecCCCeEEecC
Confidence 3446688888888887 4678999853 22 1223332 678999999999 9988888889999876
Q ss_pred C
Q 022582 237 D 237 (295)
Q Consensus 237 d 237 (295)
+
T Consensus 83 ~ 83 (222)
T 3ihu_A 83 S 83 (222)
T ss_dssp C
T ss_pred C
Confidence 5
No 54
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=20.65 E-value=2.1e+02 Score=23.28 Aligned_cols=75 Identities=23% Similarity=0.228 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeecccccc---C
Q 022582 161 QPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSL---D 237 (295)
Q Consensus 161 ~~a~~lv~~ml~~ll~~~~~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSl---d 237 (295)
.+.+|....+.+.|-+ ....|-+.+.+|-|-|.-|.-...++=+.|.+||.+. .+|-.|.... +
T Consensus 55 ~~~~EA~~~L~~fL~~------a~~~g~r~V~IIHGKG~gs~~~~~vLk~~V~~wL~~~-------~~V~~f~~a~~~~G 121 (137)
T 3qd7_X 55 QPVEECRKMVFSFIQQ------ALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEF-------DDVQAYCTALPHHG 121 (137)
T ss_dssp CCHHHHHHHHHHHHHH------HHHTTCSEEEEECCCCSSTTSHHHHHHHHHHHHHHTS-------TTEEEEEECCGGGT
T ss_pred CCHHHHHHHHHHHHHH------HHHCCCCEEEEEECCCCCCCCchHHHHHHHHHHHhcC-------CceeEEeecCccCC
Confidence 3456665555555533 2346788999999999877777889999999999876 3455566543 3
Q ss_pred CCcceEEEecc
Q 022582 238 MAGFSISIMKA 248 (295)
Q Consensus 238 m~GfSiTLl~l 248 (295)
..|..+-+||-
T Consensus 122 G~Gat~V~Lr~ 132 (137)
T 3qd7_X 122 GSGACYVALRK 132 (137)
T ss_dssp GGGEEEEEECC
T ss_pred CCEEEEEEEEc
Confidence 44444444443
No 55
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=20.42 E-value=3.3e+02 Score=21.72 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=36.9
Q ss_pred ceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEE
Q 022582 3 TAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVI 64 (295)
Q Consensus 3 dAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~vi 64 (295)
|.+++...+ +...++++.+..+-.+.|.|++..... -++....+..++.|.+++.+-
T Consensus 110 D~i~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~~~~~~~ 166 (204)
T 3e05_A 110 DRVFIGGSG--GMLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGYMVEVAC 166 (204)
T ss_dssp SEEEESCCT--TCHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCC--cCHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCCceeEEE
Confidence 444444433 257788888777777889999864432 246666777788897555443
No 56
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=20.28 E-value=75 Score=28.10 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=28.6
Q ss_pred CceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccC
Q 022582 30 MGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCAL 71 (295)
Q Consensus 30 ~GvL~iv~NYtGD~lNFgmA~E~A~~~Gi~v~~viV~DDva~ 71 (295)
+-.++++.|+||......--.+.|++.|+ .++-|++-.
T Consensus 124 ~~~~v~~~n~~G~~~~l~~i~~l~~~~~~----~li~D~a~~ 161 (373)
T 3frk_A 124 KTKAIIAVHLYGQPADMDEIKRIAKKYNL----KLIEDAAQA 161 (373)
T ss_dssp TEEEEEEECCTTCCCCHHHHHHHHHHHTC----EEEEECTTC
T ss_pred CCeEEEEECCCcCcccHHHHHHHHHHcCC----EEEEECCcc
Confidence 33455688999999999888888988874 556676643
No 57
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=20.25 E-value=1.1e+02 Score=24.71 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=28.6
Q ss_pred CCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEE
Q 022582 185 TRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVER 226 (295)
Q Consensus 185 ~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r 226 (295)
..+.+.+|++.|+|+.+.. ++.+.+.|.++ |+.|..
T Consensus 37 ~g~~~~vv~~HG~~~~~~~-----~~~~~~~l~~~-G~~v~~ 72 (270)
T 3rm3_A 37 ENGPVGVLLVHGFTGTPHS-----MRPLAEAYAKA-GYTVCL 72 (270)
T ss_dssp CCSSEEEEEECCTTCCGGG-----THHHHHHHHHT-TCEEEE
T ss_pred CCCCeEEEEECCCCCChhH-----HHHHHHHHHHC-CCEEEE
Confidence 3456899999999999874 56778888888 888764
No 58
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=20.17 E-value=1.1e+02 Score=24.61 Aligned_cols=36 Identities=14% Similarity=0.040 Sum_probs=27.6
Q ss_pred CCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEe
Q 022582 186 RGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERV 227 (295)
Q Consensus 186 ~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~ 227 (295)
++..++|++.|+|+.+. .++.+.+.|.++ |+.|...
T Consensus 40 ~~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~-g~~v~~~ 75 (303)
T 3pe6_A 40 TPKALIFVSHGAGEHSG-----RYEELARMLMGL-DLLVFAH 75 (303)
T ss_dssp CCSEEEEEECCTTCCGG-----GGHHHHHHHHHT-TEEEEEE
T ss_pred CCCeEEEEECCCCchhh-----HHHHHHHHHHhC-CCcEEEe
Confidence 34678999999999887 446677888888 8877643
Done!