Query 022583
Match_columns 295
No_of_seqs 124 out of 1583
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:38:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022583.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022583hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK08588 succinyl-diaminopimel 100.0 1E-39 2.3E-44 295.6 28.3 262 2-295 113-377 (377)
2 PRK13013 succinyl-diaminopimel 100.0 5.7E-39 1.2E-43 295.4 29.4 273 2-295 136-423 (427)
3 PRK06915 acetylornithine deace 100.0 1.2E-38 2.5E-43 292.8 27.7 269 2-294 147-418 (422)
4 PRK13009 succinyl-diaminopimel 100.0 1.8E-37 4E-42 280.8 28.4 256 2-294 112-374 (375)
5 PRK08651 succinyl-diaminopimel 100.0 1.3E-37 2.8E-42 283.6 27.5 262 2-295 127-392 (394)
6 TIGR01246 dapE_proteo succinyl 100.0 1.8E-37 4E-42 280.3 27.8 256 2-293 109-370 (370)
7 TIGR01910 DapE-ArgE acetylorni 100.0 7.8E-38 1.7E-42 283.2 23.5 255 2-285 118-375 (375)
8 PRK08652 acetylornithine deace 100.0 4.9E-37 1.1E-41 275.2 26.5 238 11-294 107-345 (347)
9 PRK07522 acetylornithine deace 100.0 4.6E-37 1E-41 279.1 26.2 266 2-294 117-384 (385)
10 TIGR03320 ygeY M20/DapE family 100.0 5.1E-37 1.1E-41 279.6 26.3 260 2-295 121-395 (395)
11 PRK06837 acetylornithine deace 100.0 6.2E-37 1.3E-41 281.5 27.0 267 2-294 151-422 (427)
12 PRK00466 acetyl-lysine deacety 100.0 1.3E-36 2.8E-41 272.3 26.1 231 13-295 112-344 (346)
13 TIGR03526 selenium_YgeY putati 100.0 1.2E-36 2.6E-41 277.0 26.2 258 2-295 121-395 (395)
14 PRK13983 diaminopimelate amino 100.0 2.6E-36 5.6E-41 275.5 27.9 261 2-292 130-399 (400)
15 TIGR01892 AcOrn-deacetyl acety 100.0 1.1E-36 2.5E-41 274.5 25.2 252 2-289 111-363 (364)
16 PRK08596 acetylornithine deace 100.0 3.7E-36 7.9E-41 275.9 27.1 269 1-295 130-417 (421)
17 PRK13004 peptidase; Reviewed 100.0 3E-36 6.4E-41 274.8 26.1 270 2-295 123-397 (399)
18 PRK07338 hypothetical protein; 100.0 2.8E-36 6.1E-41 275.4 24.7 252 2-295 142-399 (402)
19 PRK08201 hypothetical protein; 100.0 7.7E-36 1.7E-40 276.5 27.0 269 2-295 133-455 (456)
20 PRK08737 acetylornithine deace 100.0 1.2E-35 2.7E-40 266.9 26.1 245 11-292 117-363 (364)
21 PRK05111 acetylornithine deace 100.0 1.9E-35 4.1E-40 268.3 27.0 256 2-294 124-381 (383)
22 TIGR01880 Ac-peptdase-euk N-ac 100.0 6.5E-36 1.4E-40 272.8 23.5 265 2-294 125-398 (400)
23 PRK04443 acetyl-lysine deacety 100.0 2.1E-35 4.5E-40 264.6 25.2 240 8-293 107-348 (348)
24 PRK06133 glutamate carboxypept 100.0 3.1E-35 6.8E-40 268.8 25.3 252 2-295 149-408 (410)
25 PRK13007 succinyl-diaminopimel 100.0 2.8E-34 6.1E-39 257.9 26.0 240 10-290 112-351 (352)
26 PRK06446 hypothetical protein; 100.0 1.7E-34 3.7E-39 265.9 24.6 263 3-295 117-435 (436)
27 TIGR01900 dapE-gram_pos succin 100.0 2.7E-34 5.9E-39 259.4 25.4 246 8-275 124-373 (373)
28 TIGR01883 PepT-like peptidase 100.0 1.5E-34 3.3E-39 260.4 23.4 244 2-290 113-360 (361)
29 PRK09104 hypothetical protein; 100.0 8.7E-34 1.9E-38 263.3 27.7 268 2-295 141-463 (464)
30 PRK09290 allantoate amidohydro 100.0 6.5E-34 1.4E-38 260.5 24.8 256 2-295 105-411 (413)
31 PRK07473 carboxypeptidase; Pro 100.0 7E-34 1.5E-38 256.9 24.3 245 2-293 125-375 (376)
32 TIGR01902 dapE-lys-deAc N-acet 100.0 9.4E-34 2E-38 252.8 24.9 233 11-294 100-334 (336)
33 PRK09133 hypothetical protein; 100.0 3.3E-34 7.1E-39 266.6 22.5 261 2-295 154-470 (472)
34 PRK12892 allantoate amidohydro 100.0 8.4E-34 1.8E-38 259.9 24.6 255 2-295 106-411 (412)
35 PRK07906 hypothetical protein; 100.0 1.7E-33 3.6E-38 258.9 24.4 258 2-292 118-425 (426)
36 PRK12893 allantoate amidohydro 100.0 1.3E-33 2.8E-38 258.6 22.9 255 2-294 108-409 (412)
37 TIGR01879 hydantase amidase, h 100.0 2.6E-33 5.6E-38 255.5 23.9 255 1-293 98-401 (401)
38 PRK07907 hypothetical protein; 100.0 8.8E-33 1.9E-37 255.5 27.6 263 8-294 140-447 (449)
39 PRK12890 allantoate amidohydro 100.0 4.7E-33 1E-37 255.0 24.7 259 2-295 106-412 (414)
40 PLN02280 IAA-amino acid hydrol 100.0 8.1E-33 1.8E-37 255.3 25.8 253 2-293 199-473 (478)
41 PRK07079 hypothetical protein; 100.0 1E-32 2.2E-37 256.3 26.2 267 2-295 140-456 (469)
42 PRK12891 allantoate amidohydro 100.0 5.6E-33 1.2E-37 254.2 23.4 253 1-294 107-409 (414)
43 PRK08262 hypothetical protein; 100.0 4E-33 8.6E-38 260.3 22.4 264 2-294 167-484 (486)
44 COG0624 ArgE Acetylornithine d 100.0 2.3E-32 5E-37 250.1 26.7 261 2-295 129-408 (409)
45 TIGR01886 dipeptidase dipeptid 100.0 1.6E-32 3.5E-37 254.3 25.8 256 1-295 129-466 (466)
46 PRK13381 peptidase T; Provisio 100.0 2.4E-32 5.1E-37 249.6 24.3 248 2-295 151-404 (404)
47 PRK05469 peptidase T; Provisio 100.0 4.7E-31 1E-35 241.3 23.1 249 2-295 153-406 (408)
48 TIGR01882 peptidase-T peptidas 100.0 1.5E-31 3.2E-36 244.5 18.1 249 2-295 155-408 (410)
49 PRK07318 dipeptidase PepV; Rev 100.0 4.4E-31 9.5E-36 245.1 21.3 259 1-295 130-466 (466)
50 PLN02693 IAA-amino acid hydrol 100.0 3.4E-30 7.3E-35 236.3 26.6 253 2-293 149-420 (437)
51 COG1473 AbgB Metal-dependent a 100.0 7.1E-30 1.5E-34 227.8 24.8 254 2-293 116-388 (392)
52 TIGR03176 AllC allantoate amid 100.0 3.6E-30 7.9E-35 234.6 22.6 257 1-295 100-404 (406)
53 PRK15026 aminoacyl-histidine d 100.0 1.5E-29 3.3E-34 234.2 22.1 263 2-294 125-483 (485)
54 PRK07205 hypothetical protein; 100.0 1.5E-28 3.3E-33 227.0 25.1 254 2-295 129-443 (444)
55 TIGR01893 aa-his-dipept aminoa 100.0 1.3E-28 2.9E-33 229.1 24.0 255 10-293 126-476 (477)
56 PRK06156 hypothetical protein; 100.0 1.9E-28 4.1E-33 229.9 24.8 255 2-295 167-516 (520)
57 TIGR01891 amidohydrolases amid 100.0 1.1E-28 2.4E-33 222.4 22.1 238 3-279 104-360 (363)
58 KOG2275 Aminoacylase ACY1 and 100.0 6.8E-29 1.5E-33 215.6 19.1 266 1-295 141-419 (420)
59 PRK08554 peptidase; Reviewed 100.0 5.8E-28 1.3E-32 221.9 23.5 256 2-294 116-437 (438)
60 PRK13590 putative bifunctional 100.0 5.6E-28 1.2E-32 229.1 23.0 255 1-294 282-587 (591)
61 PRK13799 unknown domain/N-carb 100.0 5.3E-28 1.1E-32 229.1 22.8 258 1-295 282-590 (591)
62 TIGR01887 dipeptidaselike dipe 100.0 1.7E-27 3.7E-32 219.2 21.9 249 2-290 119-447 (447)
63 KOG2276 Metalloexopeptidases [ 99.9 7.4E-23 1.6E-27 176.6 22.4 272 1-295 144-472 (473)
64 COG2195 PepD Di- and tripeptid 99.8 1.3E-20 2.9E-25 168.5 13.6 246 9-294 165-412 (414)
65 PF07687 M20_dimer: Peptidase 99.8 4.1E-18 9E-23 127.4 9.9 109 62-175 1-109 (111)
66 PF01546 Peptidase_M20: Peptid 99.5 6.2E-14 1.3E-18 114.6 8.2 75 216-292 111-189 (189)
67 COG4187 RocB Arginine degradat 98.7 8.1E-08 1.8E-12 85.1 8.3 153 9-174 159-326 (553)
68 PRK09961 exoaminopeptidase; Pr 97.7 8.2E-05 1.8E-09 66.5 7.2 75 216-293 255-333 (344)
69 TIGR03107 glu_aminopep glutamy 97.2 0.0015 3.3E-08 58.5 7.6 75 217-294 265-342 (350)
70 COG1363 FrvX Cellulase M and r 96.1 0.022 4.7E-07 50.8 7.2 73 218-293 270-346 (355)
71 PRK09864 putative peptidase; P 95.5 0.068 1.5E-06 48.0 8.0 74 217-293 264-341 (356)
72 TIGR03106 trio_M42_hydro hydro 93.9 0.24 5.3E-06 44.4 7.4 72 216-291 265-340 (343)
73 PF04389 Peptidase_M28: Peptid 93.4 0.023 5E-07 45.7 0.1 51 2-55 39-89 (179)
74 PRK09864 putative peptidase; P 92.4 0.13 2.8E-06 46.2 3.5 46 3-57 186-231 (356)
75 PF05343 Peptidase_M42: M42 gl 92.3 0.26 5.7E-06 43.1 5.1 66 217-285 223-292 (292)
76 TIGR03107 glu_aminopep glutamy 92.2 0.16 3.5E-06 45.6 3.8 41 10-58 197-237 (350)
77 PTZ00371 aspartyl aminopeptida 92.1 0.75 1.6E-05 43.0 8.1 77 216-294 374-456 (465)
78 PRK02256 putative aminopeptida 92.0 0.41 8.9E-06 44.6 6.2 75 215-292 380-461 (462)
79 COG1363 FrvX Cellulase M and r 91.7 0.15 3.2E-06 45.7 2.9 42 8-57 197-238 (355)
80 PF05343 Peptidase_M42: M42 gl 91.1 0.16 3.4E-06 44.5 2.4 39 10-56 153-191 (292)
81 PRK09961 exoaminopeptidase; Pr 90.2 0.33 7.2E-06 43.5 3.8 40 10-57 185-224 (344)
82 PRK10199 alkaline phosphatase 88.7 0.36 7.7E-06 43.1 2.7 34 2-40 156-189 (346)
83 PRK02813 putative aminopeptida 88.1 1.2 2.6E-05 41.2 5.9 74 216-291 347-426 (428)
84 TIGR03106 trio_M42_hydro hydro 80.4 1 2.3E-05 40.3 1.9 26 2-27 196-221 (343)
85 COG1362 LAP4 Aspartyl aminopep 75.6 8.3 0.00018 35.2 6.0 75 216-292 355-435 (437)
86 KOG2194 Aminopeptidases of the 66.6 3.6 7.8E-05 40.8 1.9 52 1-56 175-226 (834)
87 PF02127 Peptidase_M18: Aminop 60.1 33 0.00072 31.8 6.8 88 197-289 338-431 (432)
88 PHA02448 hypothetical protein 54.9 53 0.0012 24.8 5.9 38 57-94 60-100 (192)
89 COG2234 Iap Predicted aminopep 49.8 15 0.00032 34.0 2.9 35 2-41 241-275 (435)
90 PRK06156 hypothetical protein; 45.6 2.8E+02 0.006 26.5 13.7 43 124-172 239-281 (520)
91 PRK15026 aminoacyl-histidine d 45.3 37 0.00081 32.0 4.8 42 124-172 344-385 (485)
92 PRK02813 putative aminopeptida 40.8 25 0.00053 32.7 2.8 45 12-56 252-311 (428)
93 KOG2195 Transferrin receptor a 37.0 26 0.00056 34.7 2.4 36 3-41 387-422 (702)
94 COG0766 MurA UDP-N-acetylgluco 25.9 1.9E+02 0.0041 26.6 5.7 94 124-226 213-319 (421)
95 PF03755 YicC_N: YicC-like fam 24.7 3.4E+02 0.0074 21.2 7.1 65 146-231 30-95 (159)
96 cd06411 PB1_p51 The PB1 domain 23.2 2.6E+02 0.0056 19.2 6.1 30 144-173 4-33 (78)
No 1
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1e-39 Score=295.63 Aligned_cols=262 Identities=23% Similarity=0.282 Sum_probs=220.8
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++.+..++++|.|+|++|||.|+ .|++++++++.+++ +|++++.+|+...+.++++|..+++|+++|+++|+
T Consensus 113 ~~l~~~~~~~~~~i~l~~~~dEE~g~---~G~~~~~~~~~~~~--~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~Hs 187 (377)
T PRK08588 113 IELKEQGQLLNGTIRLLATAGEEVGE---LGAKQLTEKGYADD--LDALIIGEPSGHGIVYAHKGSMDYKVTSTGKAAHS 187 (377)
T ss_pred HHHHHcCCCCCCcEEEEEEcccccCc---hhHHHHHhcCccCC--CCEEEEecCCCceeEEEEEEEEEEEEEEEeechhc
Confidence 45777777889999999999999987 79999999876543 57899999988888999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~ 161 (295)
+.|+.|.|||..+++++.++++... .+... ..+.+..|++++.|+ ||...|+||++|++.+|+|+.|+++.++
T Consensus 188 s~p~~g~nAi~~~~~~l~~l~~~~~-~~~~~-----~~~~~~~t~~v~~i~-gG~~~nvip~~~~~~~d~R~~p~~~~~~ 260 (377)
T PRK08588 188 SMPELGVNAIDPLLEFYNEQKEYFD-SIKKH-----NPYLGGLTHVVTIIN-GGEQVNSVPDEAELEFNIRTIPEYDNDQ 260 (377)
T ss_pred cCCccccCHHHHHHHHHHHHHHHhh-hhccc-----CccCCCCceeeeEEe-CCCcCCcCCCeEEEEEEeccCCCCCHHH
Confidence 9999999999999999999987532 22210 112235789999998 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-ecc
Q 022583 162 VMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SIT 240 (295)
Q Consensus 162 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~-~~~ 240 (295)
+.+.+++.+++.... .+.++++++...+||+..++++++++.+++++++.+|.++.. ...
T Consensus 261 v~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 321 (377)
T PRK08588 261 VISLLQEIINEVNQN-------------------GAAQLSLDIYSNHRPVASDKDSKLVQLAKDVAKSYVGQDIPLSAIP 321 (377)
T ss_pred HHHHHHHHHHHHhhc-------------------cCCceEEEEecCCCCcCCCCCCHHHHHHHHHHHHhhCCCCceecCC
Confidence 999999999875432 124567776677899988899999999999999988875433 345
Q ss_pred CCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 241 GTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 241 gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
|+ +|+++|.. .|+|++.||||...++|++||++++++|.+++++|..++.+|++
T Consensus 322 g~-tD~~~~~~~~~~ip~i~~Gpg~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 322 GA-TDASSFLKKKPDFPVIIFGPGNNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred Cc-ccHHHHhhhcCCCCEEEECCCCCccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 56 58877764 48999999999656899999999999999999999999998864
No 2
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.7e-39 Score=295.38 Aligned_cols=273 Identities=15% Similarity=0.184 Sum_probs=218.5
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-CceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+..++++|.|+|++|||.|+. .|.++|++++.++..++|++|+.||+.. .+.++++|..+++|+++|+++|
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~dEE~g~~--~g~~~l~~~~~~~~~~~d~~i~~ep~~~~~i~~~~~G~~~~~i~v~G~~~H 213 (427)
T PRK13013 136 EAFLAVYPDFAGSIEISGTADEESGGF--GGVAYLAEQGRFSPDRVQHVIIPEPLNKDRICLGHRGVWWAEVETRGRIAH 213 (427)
T ss_pred HHHHHhCCCCCccEEEEEEeccccCCh--hHHHHHHhcCCccccCCCEEEEecCCCCCceEEeeeeEEEEEEEEEccccc
Confidence 567777778899999999999999873 4888999887655334689999999874 6889999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCC-cccc-cCCCCCccccceeeecCCCCc----------ceeCCeeEEE
Q 022583 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHP-KEQV-YGFETPSTMKPTQWSYPGGGI----------NQIPGECTVS 148 (295)
Q Consensus 81 s~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~-~~~~-~~~~~~~t~~~~~i~~gg~~~----------n~iP~~~~~~ 148 (295)
++.|+.|.||+..++++|.+|++...+...... .... .......+++++.|+ ||... |+||++|++.
T Consensus 214 ~~~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~-gG~~~~~~~~~~~~~n~IPd~a~~~ 292 (427)
T PRK13013 214 GSMPFLGDSAIRHMGAVLAEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIH-GGEPEQDPDYTGLPAPCVADRCRIV 292 (427)
T ss_pred cCCCCcCcCHHHHHHHHHHHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEe-CCCccccccccccccccCCceEEEE
Confidence 999999999999999999999764321111000 0000 001124789999998 77666 9999999999
Q ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHH
Q 022583 149 GDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATE 228 (295)
Q Consensus 149 ~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~ 228 (295)
+|+|+.|+++.+++.+++++.+.+...... +..++++....+||+..++++++++.+.++++
T Consensus 293 idiR~~p~~~~~~v~~~i~~~i~~~~~~~~------------------~~~~~~~~~~~~~p~~~~~~~~lv~~l~~a~~ 354 (427)
T PRK13013 293 IDRRFLIEEDLDEVKAEITALLERLKRARP------------------GFAYEIRDLFEVLPTMTDRDAPVVRSVAAAIE 354 (427)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhhCC------------------CceeEEEEcccCCcccCCCCCHHHHHHHHHHH
Confidence 999999999999999999999987643210 24455554456888989999999999999999
Q ss_pred HHhCCCCceeccCCchhhHhhhhcC-C-CeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 229 EVVGHVNPYSITGTLPLIRELQDEG-F-DVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 229 ~~~g~~~~~~~~gg~~d~~~~~~~g-~-p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+.+|.++.....++++|++++.+.| + |++.||||....+|++|||+++++|.+++++|+.++.+||.
T Consensus 355 ~~~g~~~~~~~~~g~~D~~~~~~~g~~~~~v~fGPg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~ 423 (427)
T PRK13013 355 RVLGRQADYVVSPGTYDQKHIDRIGKLKNCIAYGPGILDLAHQPDEWVGIADMVDSAKVMALVLADLLA 423 (427)
T ss_pred HhhCCCCceeecCccCCHHHHHhcCCCCCEEEECCCCccccCCCCceeEHHHHHHHHHHHHHHHHHHhc
Confidence 9888765443334446899998887 4 69999999767899999999999999999999999999974
No 3
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.2e-38 Score=292.85 Aligned_cols=269 Identities=16% Similarity=0.151 Sum_probs=216.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++.+..++++|.|+|++|||.|+ .|+.+++.+++ ++|++|+.||+...++++++|..+++|+++|+++|+
T Consensus 147 ~~l~~~~~~~~~~v~~~~~~dEE~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~H~ 219 (422)
T PRK06915 147 EALIESGIELKGDVIFQSVIEEESGG---AGTLAAILRGY----KADGAIIPEPTNMKFFPKQQGSMWFRLHVKGKAAHG 219 (422)
T ss_pred HHHHHcCCCCCCcEEEEEecccccCC---cchHHHHhcCc----CCCEEEECCCCCccceeecccEEEEEEEEEeecccc
Confidence 56777777888999999999999987 69988887653 569999999998889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~ 161 (295)
|.|+.|.||+..+++++..|+++..........+....+..+.|++++.|+ ||...|+||++|++.+|+|+.|+++.++
T Consensus 220 s~p~~g~nAi~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~-gG~~~nvvP~~a~~~~d~R~~p~~~~~~ 298 (422)
T PRK06915 220 GTRYEGVSAIEKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIE-GGSWPSSVPDSVILEGRCGIAPNETIEA 298 (422)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEee-CCCCCCccCcEEEEEEEEEECCCCCHHH
Confidence 999999999999999999998764211000000011112235689999998 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc-CCCccccCCCCHHHHHHHHHHHHHhCCCCc-eec
Q 022583 162 VMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE-ATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSI 239 (295)
Q Consensus 162 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~-~~~ 239 (295)
+.++|++.+++........ . +..++++... .++++.++.++++++.+.+++++++|.++. ..+
T Consensus 299 v~~~i~~~l~~~~~~~~~~-------------~--~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~~~~~ 363 (422)
T PRK06915 299 AKEEFENWIAELNDVDEWF-------------V--EHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKPIIEAS 363 (422)
T ss_pred HHHHHHHHHHHHhccChhh-------------h--cCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCCeecee
Confidence 9999999998764321000 0 1123444332 246677888899999999999998887543 344
Q ss_pred cCCchhhHhhhhc-CCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 240 TGTLPLIRELQDE-GFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 240 ~gg~~d~~~~~~~-g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.++ +|+++|.+. |+|++.||||....+|++||+++++++..++++|++++.++|
T Consensus 364 ~g~-tD~~~~~~~~giP~v~fGpg~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~ 418 (422)
T PRK06915 364 PWG-TDGGLLTQIAGVPTIVFGPGETKVAHYPNEYIEVDKMIAAAKIIALTLLDWC 418 (422)
T ss_pred eee-ccHHHHhccCCCCEEEECCCCccccCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 555 588888886 999999999976789999999999999999999999999886
No 4
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.8e-37 Score=280.81 Aligned_cols=256 Identities=22% Similarity=0.209 Sum_probs=209.5
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----CceeeccceeeEEEEEEe
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~~~~~~~g~~~~~v~v~G 76 (295)
+.|++.+..++++|.|+|++|||.++. .|++.+++.....+.++|++|++||+.. .+.++++|..+++|+++|
T Consensus 112 ~~l~~~~~~~~~~i~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~~i~~g~~g~~~~~i~v~G 189 (375)
T PRK13009 112 ERFVAAHPDHKGSIAFLITSDEEGPAI--NGTVKVLEWLKARGEKIDYCIVGEPTSTERLGDVIKNGRRGSLTGKLTVKG 189 (375)
T ss_pred HHHHHhcCCCCceEEEEEEeecccccc--cCHHHHHHHHHHcCcCCCEEEEcCCCcccCCCCeEEEecceEEEEEEEEEe
Confidence 456677777889999999999998653 5999998765433456799999998753 366899999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCC-CcceeCCeeEEEEEEEeCC
Q 022583 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (295)
Q Consensus 77 ~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~-~~n~iP~~~~~~~~~R~~~ 155 (295)
+++|++.|+.|.||+..++++|.+|+....+.. ..+..+.+++++.|+ +|. ..|+||++|++.+|+|+.|
T Consensus 190 ~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~--------~~~~~~~~~~i~~i~-~G~~~~nvip~~~~~~~diR~~~ 260 (375)
T PRK13009 190 VQGHVAYPHLADNPIHLAAPALAELAATEWDEG--------NEFFPPTSLQITNID-AGTGATNVIPGELEAQFNFRFST 260 (375)
T ss_pred cCcccCCCCcccCHHHHHHHHHHHHHhhhccCC--------CccCCCceEEEEEEe-cCCCCCcccCCcEEEEEEEecCC
Confidence 999999999999999999999999987532111 112335788999998 665 7899999999999999999
Q ss_pred CCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC
Q 022583 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (295)
Q Consensus 156 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~ 235 (295)
+++.+++.++|++.+++. +.++++++...++|+..+. +++++.+.+++++.+|.++
T Consensus 261 ~~~~e~i~~~i~~~~~~~-----------------------~~~~~~~~~~~~~p~~~~~-~~~~~~l~~a~~~~~g~~~ 316 (375)
T PRK13009 261 EHTAESLKARVEAILDKH-----------------------GLDYTLEWTLSGEPFLTPP-GKLVDAVVAAIEAVTGITP 316 (375)
T ss_pred CCCHHHHHHHHHHHHHhc-----------------------CCCeEEEEecCCCcccCCC-cHHHHHHHHHHHHHhCCCc
Confidence 999999999999888742 1345555555667776664 8999999999999888765
Q ss_pred ce-eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 236 PY-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 236 ~~-~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.. ...|+ +|++++.+.|+|++.||||. .++|++||++++++|.+++++|.+++.+|.
T Consensus 317 ~~~~~~g~-tda~~~~~~g~p~v~~Gp~~-~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 317 ELSTSGGT-SDARFIADYGAQVVEFGPVN-ATIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred eeeccCCC-ccHHHHHHcCCCeEEeccCc-ccCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 44 34445 58999988899999999995 679999999999999999999999998874
No 5
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-37 Score=283.61 Aligned_cols=262 Identities=20% Similarity=0.263 Sum_probs=215.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-CceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+ +++|.|+|++|||.|+ .|++++++++.+ ++|++++++++.. .++++++|..+++|+++|+++|
T Consensus 127 ~~l~~~~---~~~v~~~~~~~EE~g~---~G~~~~~~~~~~---~~d~~i~~~~~~~~~i~~~~~G~~~~~i~v~G~~~H 197 (394)
T PRK08651 127 ERLDPAG---DGNIELAIVPDEETGG---TGTGYLVEEGKV---TPDYVIVGEPSGLDNICIGHRGLVWGVVKVYGKQAH 197 (394)
T ss_pred HHHHhcC---CCCEEEEEecCccccc---hhHHHHHhccCC---CCCEEEEecCCCCCceEEecccEEEEEEEEEEeccc
Confidence 3454443 7899999999999987 799999987653 3689999999886 7899999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCcccccee--eecCCCCcceeCCeeEEEEEEEeCCCCC
Q 022583 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQ--WSYPGGGINQIPGECTVSGDVRLTPFYN 158 (295)
Q Consensus 81 s~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~--i~~gg~~~n~iP~~~~~~~~~R~~~~~~ 158 (295)
++.|+.|.||+..|++++.+|++...+...... .........+++++. |+ ||...|+||++|++.+|+|+.|+++
T Consensus 198 ~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~--~~~~~~~~~~~~ig~~~i~-gG~~~nviP~~a~~~~diR~~~~~~ 274 (394)
T PRK08651 198 ASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE--YDDERGAKPTVTLGGPTVE-GGTKTNIVPGYCAFSIDRRLIPEET 274 (394)
T ss_pred cCCCccccCHHHHHHHHHHHHHHHHHhhhcccc--ccccccCCCceeecceeee-CCCCCCccCCEEEEEEEeeeCCCCC
Confidence 999999999999999999999875321111000 000011235678888 88 9999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ce
Q 022583 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PY 237 (295)
Q Consensus 159 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~ 237 (295)
.+++++++++.+++.... ++++++++....+||+.+++++++++.+++++++++|.++ +.
T Consensus 275 ~e~i~~~i~~~~~~~~~~-------------------~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~~~ 335 (394)
T PRK08651 275 AEEVRDELEALLDEVAPE-------------------LGIEVEFEITPFSEAFVTDPDSELVKALREAIREVLGVEPKKT 335 (394)
T ss_pred HHHHHHHHHHHHHHHhhc-------------------cCCCeeEEEecccCCccCCCCCHHHHHHHHHHHHHhCCCCcee
Confidence 999999999999876432 1345666666668898889999999999999999888653 34
Q ss_pred eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 238 SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 238 ~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
.+.|+ +|+++|+..|+|++.||||....+|++||+++++++..++++|.+++.+|++
T Consensus 336 ~~~g~-tD~~~~~~~gip~v~~Gpg~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 336 ISLGG-TDARFFGAKGIPTVVYGPGELELAHAPDEYVEVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred eecCc-ccHHHHhhCCCcEEEECCCChHhcCCCCceeEHHHHHHHHHHHHHHHHHhhc
Confidence 45566 4888898889999999999756899999999999999999999999999874
No 6
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.8e-37 Score=280.31 Aligned_cols=256 Identities=21% Similarity=0.199 Sum_probs=206.6
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----CceeeccceeeEEEEEEe
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~~~~~~~g~~~~~v~v~G 76 (295)
+.|++.+.+++++|.|+|++|||.++. .|++.+++........+|++|+.||+.. .++++++|..+++++++|
T Consensus 109 ~~l~~~~~~~~~~v~~~~~~dEE~~~~--~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~~i~~~~~G~~~~~v~v~G 186 (370)
T TIGR01246 109 ERFVKKNPDHKGSISLLITSDEEGTAI--DGTKKVVETLMARDELIDYCIVGEPSSVKKLGDVIKNGRRGSITGNLTIKG 186 (370)
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCC--cCHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEeeeEEEEEEEEEEc
Confidence 445666667889999999999998752 5999998754333346799999998753 367899999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCC-CcceeCCeeEEEEEEEeCC
Q 022583 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (295)
Q Consensus 77 ~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~-~~n~iP~~~~~~~~~R~~~ 155 (295)
+++|++.|+.|.||+..++++++.|++..... ...+..+++++++.|+ +|. ..|+||++|++.+|+|+.|
T Consensus 187 ~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~--------~~~~~~~~t~~i~~i~-~g~~~~nvvP~~~~~~~diR~~~ 257 (370)
T TIGR01246 187 IQGHVAYPHLANNPIHKAAPALAELTAIKWDE--------GNEFFPPTSLQITNIH-AGTGANNVIPGELYVQFNLRFST 257 (370)
T ss_pred cCcccCCcccCCCHHHHHHHHHHHHhhhhhcc--------CCccCCCCceEeeeee-cCCCCCcccCCceEEEEEEecCC
Confidence 99999999999999999999999998652211 0112345789999998 775 6899999999999999999
Q ss_pred CCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC
Q 022583 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN 235 (295)
Q Consensus 156 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~ 235 (295)
+++.+++.+.+++.+++. +..+++++...++|+..+ ++++++.+.+++++.+|.++
T Consensus 258 ~~~~~~v~~~i~~~~~~~-----------------------~~~~~v~~~~~~~p~~~~-~~~~~~~~~~a~~~~~g~~~ 313 (370)
T TIGR01246 258 EVSDEILKQRVEAILDQH-----------------------GLDYDLEWSLSGEPFLTN-DGKLIDKAREAIEETNGIKP 313 (370)
T ss_pred CCCHHHHHHHHHHHHHHc-----------------------CCCEEEEEecCCcceeCC-CCHHHHHHHHHHHHHhCCCC
Confidence 999999988888887642 133455544456666666 88999999999999888765
Q ss_pred ceeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 236 PYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 236 ~~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
.....++.+|++++...|+|++.||||. ..+|++||+++++++.+++++|.+++.+|
T Consensus 314 ~~~~~~g~~d~~~~~~~g~p~~~~Gp~~-~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 314 ELSTGGGTSDGRFIALMGAEVVEFGPVN-ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred ceecCCCCchHHHHHHcCCCEEEecCCc-ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 4433333358999988899999999995 56999999999999999999999999875
No 7
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=7.8e-38 Score=283.16 Aligned_cols=255 Identities=21% Similarity=0.248 Sum_probs=208.8
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCC-CCCceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~-~~~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+..++++|.|+|+++||.|+ .|++++++++.++ ++|++|+.+|+ ...++++++|..+++|+++|+++|
T Consensus 118 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~G~~~~~~~~~~~--~~d~~i~~~~~~~~~v~~~~~G~~~~~i~~~G~~~H 192 (375)
T TIGR01910 118 KAIREAGIKPNGNIILQSVVDEESGE---AGTLYLLQRGYFK--DADGVLIPEPSGGDNIVIGHKGSIWFKLRVKGKQAH 192 (375)
T ss_pred HHHHHcCCCCCccEEEEEEcCcccCc---hhHHHHHHcCCCC--CCCEEEECCCCCCCceEEEecceEEEEEEEeeeecc
Confidence 45677777789999999999999987 7999999887543 36899999988 477889999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 81 s~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
++.|+.|.||+..++++|++|.++......... .......++++++.|+ ||...|+||++|++.+|+|+.|+++.+
T Consensus 193 s~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~t~~i~~i~-gG~~~nviP~~~~~~~diR~~~~~~~~ 268 (375)
T TIGR01910 193 ASFPQFGVNAIMKLAKLITELNELEEHIYARNS---YGFIPGPITFNPGVIK-GGDWVNSVPDYCEFSIDVRIIPEENLD 268 (375)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc---ccccCCCccccceeEE-CCCCcCcCCCEEEEEEEeeeCCCCCHH
Confidence 999999999999999999999876422111000 0011124789999998 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCC-ccccCCCCHHHHHHHHHHHHHhCCCC-cee
Q 022583 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATN-GVACNLDSRGFHVLCKATEEVVGHVN-PYS 238 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~ 238 (295)
++++++++.+++.... .+++++++....+| |+..+.++++++.+.+++++.+|.++ ...
T Consensus 269 ~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (375)
T TIGR01910 269 EVKQIIEDVVKALSKS-------------------DGWLYENEPVVKWSGPNETPPDSRLVKALEAIIKKVRGIEPEVLV 329 (375)
T ss_pred HHHHHHHHHHHHHhhc-------------------CcHHhhCCCeeeecCCcCCCCCCHHHHHHHHHHHHHhCCCCeEee
Confidence 9999999999875421 12344444434456 78888999999999999999888753 344
Q ss_pred ccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHH
Q 022583 239 ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQV 285 (295)
Q Consensus 239 ~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~ 285 (295)
+.|+ +|++++++.|+|++.||||...++|++|||++++++.+++++
T Consensus 330 ~~g~-tD~~~~~~~gip~v~~Gpg~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 330 STGG-TDARFLRKAGIPSIVYGPGDLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred eccc-hhHHHHHHcCCcEEEECCCCccccCCCCceeEHHHHHHHhhC
Confidence 5566 589999989999999999976789999999999999998864
No 8
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.9e-37 Score=275.24 Aligned_cols=238 Identities=19% Similarity=0.216 Sum_probs=199.0
Q ss_pred CceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCcCCCCCCCCH
Q 022583 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAINP 90 (295)
Q Consensus 11 ~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs~~p~~g~na 90 (295)
++++|.|+|++|||.|+ .|+++++++. ++|++|+.||+...++++++|..+++|+++|+++|++.|+.|.||
T Consensus 107 ~~~~v~~~~~~dEE~g~---~G~~~~~~~~-----~~d~~i~~ep~~~~i~~~~~g~~~~~i~~~G~~~H~s~p~~g~nA 178 (347)
T PRK08652 107 EDLNVGIAFVSDEEEGG---RGSALFAERY-----RPKMAIVLEPTDLKVAIAHYGNLEAYVEVKGKPSHGACPESGVNA 178 (347)
T ss_pred cCCCEEEEEecCcccCC---hhHHHHHHhc-----CCCEEEEecCCCCceeeecccEEEEEEEEEeeecccCCCCcCcCH
Confidence 46799999999999987 7999998752 358999999988888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHH
Q 022583 91 LELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYV 170 (295)
Q Consensus 91 i~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i 170 (295)
+..+++++.+|+++.... .. .+. .+++++.|+ ||...|+||++|++.+|+|+.|+++.+++.+++++.+
T Consensus 179 i~~~a~~i~~l~~~~~~~-~~-------~~~--~~~~~~~i~-gg~~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 247 (347)
T PRK08652 179 IEKAFEMLEKLKELLKAL-GK-------YFD--PHIGIQEII-GGSPEYSIPALCRLRLDARIPPEVEVEDVLDEIDPIL 247 (347)
T ss_pred HHHHHHHHHHHHHHHHhh-hc-------ccC--CCCcceeee-cCCCCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 999999999998753211 10 011 245677788 8889999999999999999999999999999999888
Q ss_pred HHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhh
Q 022583 171 DDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIREL 249 (295)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~ 249 (295)
++. +. ++++...+|++..+.++++++.+++++++. |.++ +....|+ +|++++
T Consensus 248 ~~~-----------------------~v--~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~~~~~~g~-tDa~~~ 300 (347)
T PRK08652 248 DEY-----------------------TV--KYEYTEIWDGFELDEDEEIVQLLEKAMKEV-GLEPEFTVMRSW-TDAINF 300 (347)
T ss_pred Hhc-----------------------Cc--eEEEeccCCcccCCCCCHHHHHHHHHHHHh-CCCCCcCcCCcc-chhHHH
Confidence 642 12 333334467887888999999999999998 7653 3344556 599999
Q ss_pred hhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 250 QDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 250 ~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
++.|+|++.||||....+|++|||+++++|.++++++.+++..+-
T Consensus 301 ~~~gip~v~~Gpg~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~ 345 (347)
T PRK08652 301 RYNGTKTVVWGPGELDLCHTKFERIDVREVEKAKEFLKALNEILL 345 (347)
T ss_pred HHCCCCEEEECCCchhhcCCCCceeeHHHHHHHHHHHHHHHHHHh
Confidence 888999999999976789999999999999999999999998763
No 9
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.6e-37 Score=279.13 Aligned_cols=266 Identities=17% Similarity=0.250 Sum_probs=210.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++. .++++|.|+|++|||.|+ .|+++|+++......++|++|+++|+...++++++|..+++|+++|+++|+
T Consensus 117 ~~l~~~--~~~~~i~~~~~~dEE~g~---~G~~~l~~~~~~~~~~~d~~i~~ep~~~~~~~~~~G~~~~~i~v~G~~~Hs 191 (385)
T PRK07522 117 PELAAA--PLRRPLHLAFSYDEEVGC---LGVPSMIARLPERGVKPAGCIVGEPTSMRPVVGHKGKAAYRCTVRGRAAHS 191 (385)
T ss_pred HHHHhC--CCCCCEEEEEEeccccCC---ccHHHHHHHhhhcCCCCCEEEEccCCCCeeeeeecceEEEEEEEEeecccc
Confidence 455554 467899999999999987 799999986533345679999999998889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCC-CccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFET-PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
+.|+.|.||+..++++|.+|++...+...... ....+.. .++++++.|+ ||...|+||++|++.+|+|+.|+++.+
T Consensus 192 ~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~--~~~~~~~~~~t~~i~~i~-gG~~~nviP~~a~~~~diR~~~~~~~~ 268 (385)
T PRK07522 192 SLAPQGVNAIEYAARLIAHLRDLADRLAAPGP--FDALFDPPYSTLQTGTIQ-GGTALNIVPAECEFDFEFRNLPGDDPE 268 (385)
T ss_pred CCCccCcCHHHHHHHHHHHHHHHHHHHhhcCC--CCcCCCCCcceeEEeeee-cCccccccCCceEEEEEEccCCCCCHH
Confidence 99999999999999999999875321111000 0011211 2688999998 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-hhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceec
Q 022583 161 DVMKRLQEYVDDIN-ENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSI 239 (295)
Q Consensus 161 ~~~~~i~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~ 239 (295)
++.++|++.+++.. ... .. ...+++++++....+||+.+++++++++.+++++ +.......
T Consensus 269 ~i~~~i~~~i~~~~~~~~---~~-----------~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~ 330 (385)
T PRK07522 269 AILARIRAYAEAELLPEM---RA-----------VHPEAAIEFEPLSAYPGLDTAEDAAAARLVRALT----GDNDLRKV 330 (385)
T ss_pred HHHHHHHHHHHhhcchhh---hh-----------hcCCCcEEEEeccCCCCCCCCCCcHHHHHHHHHh----CCCCcceE
Confidence 99999999988721 100 00 1124566777666789999999999999887654 43322223
Q ss_pred cCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 240 TGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 240 ~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.++ +|+++++..|+|++.||||....+|++||++++++|.++++++.+++..++
T Consensus 331 ~~~-td~~~~~~~gip~v~~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 331 AYG-TEAGLFQRAGIPTVVCGPGSIEQAHKPDEFVELAQLAACEAFLRRLLASLA 384 (385)
T ss_pred eee-cchHHhccCCCCEEEECCCChhhCCCCCccccHHHHHHHHHHHHHHHHHHh
Confidence 345 488888888999999999976789999999999999999999999999886
No 10
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=5.1e-37 Score=279.59 Aligned_cols=260 Identities=15% Similarity=0.084 Sum_probs=206.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++.+..++++|.|++++|||.++- .|.++++++.. +.+|++|++||+...++++++|..+++|+++|+++|+
T Consensus 121 ~~l~~~g~~~~~~i~~~~~~dEE~~~g--~~~~~~~~~~~---~~~d~~iv~ep~~~~i~~g~~G~~~~~v~~~G~~~Hs 195 (395)
T TIGR03320 121 KIIKDLGLLDDYTLLVTGTVQEEDCDG--LCWQYIIEEDG---IKPEFVVITEPTDMNIYRGQRGRMEIKVTVKGVSCHG 195 (395)
T ss_pred HHHHHcCCCCCceEEEEecccccccCc--hHHHHHHHhcC---CCCCEEEEcCCCccceEEecceEEEEEEEEeeecccc
Confidence 467777777888999999999997530 34567775432 3579999999998889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCC-CCcceeCCeeEEEEEEEeCCCCChH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg-~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
+.|+.|.||+..++++|.+|++.... ... ..+.++.+++++.|+ +| ...|+||++|++.+|+|+.|+++.+
T Consensus 196 s~p~~g~nAi~~~~~~l~~l~~~~~~-~~~------~~~~~~~t~~v~~i~-~g~~~~NviP~~~~~~~diR~~p~~~~~ 267 (395)
T TIGR03320 196 SAPERGDNAIYKMAPILKELSQLNAN-LVE------DPFLGKGTLTVSEIF-FSSPSRCAVADGCTISIDRRLTWGETWE 267 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHh-hcC------CcccCcCceeeeeee-cCCCCcCccCCEEEEEEEEecCCCCCHH
Confidence 99999999999999999999886321 110 111234688999998 55 4799999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEE-------------EeccCCCccccCCCCHHHHHHHHHH
Q 022583 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTL-------------TFDEATNGVACNLDSRGFHVLCKAT 227 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~p~~~~~~~~~~~~~~~~a~ 227 (295)
++.++|++.+..... ..++++ .....+|++.+++++|+++.+.+++
T Consensus 268 ~i~~~i~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 326 (395)
T TIGR03320 268 YALEQIRNLPAVQGA---------------------EAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETY 326 (395)
T ss_pred HHHHHHHHHHhhcCC---------------------CceEeeeccCcccccccccccccccCccccCCCCHHHHHHHHHH
Confidence 999999887654210 011221 1122478898999999999999999
Q ss_pred HHHhCCCCce-eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 228 EEVVGHVNPY-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 228 ~~~~g~~~~~-~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
++++|.++.. ...++++..+++...|+|++.||||...++|++||||++++|.+++++|.+++.+||+
T Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~~~g~p~v~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 327 KRLFGKEPGVDKWTFSTNGVSIMGRHGIPVIGFGPGDEDQAHAPNEKTWKEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred HHHhCCCCceeecceecccceehhhcCCCEEEECCCchhhccCCCcEEEHHHHHHHHHHHHHHHHHhhC
Confidence 9998876433 2333433335666789999999999767899999999999999999999999999986
No 11
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=6.2e-37 Score=281.49 Aligned_cols=267 Identities=13% Similarity=0.134 Sum_probs=214.6
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++.+..++++|.|+|++|||.++ .|+..++.+++ .+|++|+.||+...++++++|..+++|+++|+++|+
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~dEE~~g---~g~~~~~~~~~----~~d~~iv~ep~~~~i~~~~~G~~~~~i~v~G~~~Hs 223 (427)
T PRK06837 151 DALRAAGLAPAARVHFQSVIEEESTG---NGALSTLQRGY----RADACLIPEPTGEKLVRAQVGVIWFRLRVRGAPVHV 223 (427)
T ss_pred HHHHHcCCCCCCcEEEEEEeccccCC---HhHHHHHhcCc----CCCEEEEcCCCCCccccccceeEEEEEEEEeecccc
Confidence 46777777889999999999999887 68888877653 468999999998888999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCC--cccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCCh
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHP--KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~--~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~ 159 (295)
+.|+.|.||+..++++|.+|++.... +.... ......+..+.|+|++.|+ ||...|+||++|++.+++|+.|++++
T Consensus 224 ~~p~~g~nAi~~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~~~t~ni~~i~-gG~~~nvVP~~~~~~~~ir~~p~~~~ 301 (427)
T PRK06837 224 REAGTGANAIDAAYHLIQALRELEAE-WNARKASDPHFEDVPHPINFNVGIIK-GGDWASSVPAWCDLDCRIAIYPGVTA 301 (427)
T ss_pred CCcccCcCHHHHHHHHHHHHHHHHHH-HhhcccCCCcccCCCCceeEeeeeEe-CCCCCCccCCEEEEEEEEeECCCCCH
Confidence 99999999999999999999875321 11000 0001112235689999998 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc-CCCccccCCCCHHHHHHHHHHHHHhCCCCc-e
Q 022583 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE-ATNGVACNLDSRGFHVLCKATEEVVGHVNP-Y 237 (295)
Q Consensus 160 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~-~ 237 (295)
+++.+++++.+++........ .+..+++++.. .++|+.+++++++++.+.+++++.+|.+.. .
T Consensus 302 ~~v~~~i~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~~~~ 366 (427)
T PRK06837 302 ADAQAEIEACLAAAARDDRFL---------------SNNPPEVVWSGFLAEGYVLEPGSEAEAALARAHAAVFGGPLRSF 366 (427)
T ss_pred HHHHHHHHHHHHHHHhcChhh---------------hhCCCeEEEEecccCCcCCCCCCHHHHHHHHHHHHHhCCCCeee
Confidence 999999999998754321000 01123344332 477899999999999999999998886543 4
Q ss_pred eccCCchhhHhhhh-cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 238 SITGTLPLIRELQD-EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 238 ~~~gg~~d~~~~~~-~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.+.|+ +|++++.. .|+|++.||||. .++|++||+++++++.+++++|.+++..||
T Consensus 367 ~~~g~-tDa~~~~~~~gip~v~~Gp~~-~~~H~~nE~i~i~~l~~~~~~~~~~l~~~~ 422 (427)
T PRK06837 367 VTTAY-TDTRFYGLYYGIPALCYGPSG-EGIHGFDERVDLESVRKVTKTIALFVAEWC 422 (427)
T ss_pred EEeec-cchHHHhccCCCCEEEECCCC-CccCCCCceEEHHHHHHHHHHHHHHHHHHh
Confidence 45555 58998875 799999999994 679999999999999999999999999886
No 12
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.3e-36 Score=272.29 Aligned_cols=231 Identities=17% Similarity=0.202 Sum_probs=195.9
Q ss_pred eeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC-CCceeeccceeeEEEEEEecCCCcCCCCCCCCHH
Q 022583 13 STVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFHSGLPHKAINPL 91 (295)
Q Consensus 13 ~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~~~~~~~g~~~~~v~v~G~~~Hs~~p~~g~nai 91 (295)
.++.|+|++|||.|+ .|++++++++. ++|+++++||+. ..+.++++|..+++|+++|+++|+|.|+ .||+
T Consensus 112 ~~i~~~~~~dEE~g~---~G~~~l~~~~~----~~d~~i~~ep~~~~~i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi 182 (346)
T PRK00466 112 IKVMVSGLADEESTS---IGAKELVSKGF----NFKHIIVGEPSNGTDIVVEYRGSIQLDIMCEGTPEHSSSAK--SNLI 182 (346)
T ss_pred CCEEEEEEcCcccCC---ccHHHHHhcCC----CCCEEEEcCCCCCCceEEEeeEEEEEEEEEEeeccccCCCC--cCHH
Confidence 468999999999987 79999998752 468999999987 4688999999999999999999999886 5999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHH
Q 022583 92 ELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVD 171 (295)
Q Consensus 92 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~ 171 (295)
..|++++.+|.+.. ..+ ...+++++.|+ ||...|+||++|++.+|+|+.|+++.+++++++++.+.
T Consensus 183 ~~~~~~l~~l~~~~-~~~------------~~~t~~~~~i~-gG~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 248 (346)
T PRK00466 183 VDISKKIIEVYKQP-ENY------------DKPSIVPTIIR-AGESYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQ 248 (346)
T ss_pred HHHHHHHHHHHhcc-ccC------------CCCcceeeEEe-cCCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHh
Confidence 99999999987642 111 13688999998 99999999999999999999999999999888887776
Q ss_pred HhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-eccCCchhhHhhh
Q 022583 172 DINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQ 250 (295)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~-~~~gg~~d~~~~~ 250 (295)
+ ++++....+||+..++++|+++.+.+++++. |.++.. .+.|+ +|+++|.
T Consensus 249 ~---------------------------~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~~~~~~g~-tD~~~~~ 299 (346)
T PRK00466 249 E---------------------------CGLKIVDETPPVKVSINNPVVKALMRALLKQ-NIKPRLVRKAGT-SDMNILQ 299 (346)
T ss_pred h---------------------------CcEeeccCCCCcccCCCCHHHHHHHHHHHHh-CCCceEEecCCc-CcHHHHH
Confidence 4 1223344678888899999999999999985 655433 34455 5999998
Q ss_pred hcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 251 DEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 251 ~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+.+.|++.||||....+|++|||+++++|.+++++|.+++.+|++
T Consensus 300 ~~~~~~v~fGpg~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~ 344 (346)
T PRK00466 300 KITTSIATYGPGNSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQ 344 (346)
T ss_pred HhCCCEEEECCCCcccccCCCceeeHHHHHHHHHHHHHHHHHHHh
Confidence 888899999999777899999999999999999999999999874
No 13
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.2e-36 Score=277.04 Aligned_cols=258 Identities=15% Similarity=0.090 Sum_probs=205.5
Q ss_pred hhhhcccCCCceeEEEEEEecccc-CCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~-g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+..+++++.|++++|||. ++ .|+++++++.. +++|++|++||+...+.++++|..+++|+++|+++|
T Consensus 121 ~~l~~~~~~~~~~v~~~~~~dEE~~~g---~~~~~~~~~~~---~~~d~~i~~ep~~~~i~~g~~G~~~~~v~v~G~~~H 194 (395)
T TIGR03526 121 KIIKDLGLLDDYTLLVTGTVQEEDCDG---LCWQYIIEEDK---IKPEFVVITEPTDMNIYRGQRGRMEIKVTVKGVSCH 194 (395)
T ss_pred HHHHHcCCCCCceEEEEEecccccCCc---HhHHHHHhccC---CCCCEEEecCCCCceEEEEcceEEEEEEEEecCCCc
Confidence 456777767788999999999994 33 57778886543 357899999999888899999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCC-CcceeCCeeEEEEEEEeCCCCCh
Q 022583 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTPFYNV 159 (295)
Q Consensus 81 s~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~-~~n~iP~~~~~~~~~R~~~~~~~ 159 (295)
++.|+.|.||+..+++++.+|++.... ... ..+....+++++.|+ +|. ..|+||++|++.+|+|+.|+++.
T Consensus 195 s~~p~~g~nAi~~~~~~i~~l~~~~~~-~~~------~~~~~~~~~~v~~i~-~g~~~~nviP~~~~~~~d~R~~~~~~~ 266 (395)
T TIGR03526 195 GSAPERGDNAIYKMAPILKELSQLNAN-LVE------DPFLGKGTLTVSEIF-FSSPSRCAVADGCTISIDRRLTWGETW 266 (395)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhhhh-hcC------CcccCccceeeeeee-cCCCCCCccCCeEEEEEEEecCCCCCH
Confidence 999999999999999999999875321 110 111224689999998 554 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEE-------------EeccCCCccccCCCCHHHHHHHHH
Q 022583 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTL-------------TFDEATNGVACNLDSRGFHVLCKA 226 (295)
Q Consensus 160 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~p~~~~~~~~~~~~~~~~a 226 (295)
+++++.+++.++..... .++++ .....+||+..++++|+++.+.++
T Consensus 267 ~~~~~~i~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~ 325 (395)
T TIGR03526 267 EYALEQIRNLPAVQGAE---------------------AEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALET 325 (395)
T ss_pred HHHHHHHHHHHHhcCCc---------------------ceEEEeccccccccccccccccccCccccCCCCHHHHHHHHH
Confidence 99999998887642110 11111 112247888899999999999999
Q ss_pred HHHHhCCCCce-eccCCchhh-HhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 227 TEEVVGHVNPY-SITGTLPLI-RELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 227 ~~~~~g~~~~~-~~~gg~~d~-~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+++.+|..+.. ...+++ ++ .++++.|+|++.||||...++|++||||+++++.+++++|.+++.++|.
T Consensus 326 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~p~v~~Gpg~~~~aH~~dE~i~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 326 YKRLFGKEPGVDKWTFST-NGVSIMGRHGIPVIGFGPGDEDQAHAPNEKTWKEDLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred HHHHhCCCCceeeeeeec-ccceehhhcCCCEEEECCcchhhccCCCceEEHHHHHHHHHHHHHHHHHhcC
Confidence 99999875433 223333 44 4556689999999999767899999999999999999999999999874
No 14
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-36 Score=275.52 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=208.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHc--cccccCCCCcEEEec---CCCCCceeeccceeeEEEEEEe
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKD--GLLNKLKGGPLYWID---TADKQPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~--~~~~~~~~d~~i~~e---~~~~~~~~~~~g~~~~~v~v~G 76 (295)
+.|++.+..++++|.|+|++|||.|+. .|++++++. +.+. +.|++++.+ |+...++++++|.++++|+++|
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~dEE~g~~--~g~~~~~~~~~~~~~--~~d~~i~~~~~~~~~~~i~~~~~G~~~~~v~v~G 205 (400)
T PRK13983 130 KALMDLGIRPKYNLGLAFVSDEETGSK--YGIQYLLKKHPELFK--KDDLILVPDAGNPDGSFIEIAEKSILWLKFTVKG 205 (400)
T ss_pred HHHHHhCCCCCCcEEEEEEeccccCCc--ccHHHHHhhcccccC--CCCEEEEecCCCCCCceeEEeecceEEEEEEEEe
Confidence 567777878999999999999998873 489999986 3332 247788744 4445578899999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCC-CccccceeeecCC-CCcceeCCeeEEEEEEEeC
Q 022583 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFET-PSTMKPTQWSYPG-GGINQIPGECTVSGDVRLT 154 (295)
Q Consensus 77 ~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~i~~gg-~~~n~iP~~~~~~~~~R~~ 154 (295)
+++|++.|+.|+||+..+++++..+++.....+.... ..+.+ ..+++++.+. +| ...|+||++|++.+++|+.
T Consensus 206 ~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~g~~~~nvvp~~~~~~~diR~~ 280 (400)
T PRK13983 206 KQCHASTPENGINAHRAAADFALELDEALHEKFNAKD----PLFDPPYSTFEPTKKE-ANVDNINTIPGRDVFYFDCRVL 280 (400)
T ss_pred EccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhcccc----cccCCCCcccccceee-cCCcCCcccCCeeEEEEEEEeC
Confidence 9999999999999999999999999873222222110 01111 2467778887 55 6899999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc-CCCccccCCCCHHHHHHHHHHHHHhCC
Q 022583 155 PFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE-ATNGVACNLDSRGFHVLCKATEEVVGH 233 (295)
Q Consensus 155 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~a~~~~~g~ 233 (295)
|+++.++++++|++.+++.... .+.+++++... .++++.+++++++++.+.+++++.+|.
T Consensus 281 p~~~~~~v~~~l~~~~~~~~~~-------------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~ 341 (400)
T PRK13983 281 PDYDLDEVLKDIKEIADEFEEE-------------------YGVKIEVEIVQREQAPPPTPPDSEIVKKLKRAIKEVRGI 341 (400)
T ss_pred CCCCHHHHHHHHHHHHHHhccc-------------------cCcceeEEEeeccCCccCCCCCcHHHHHHHHHHHHhcCC
Confidence 9999999999999999875432 13455666544 567888899999999999999998886
Q ss_pred CCc-eeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHh
Q 022583 234 VNP-YSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQ 292 (295)
Q Consensus 234 ~~~-~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~ 292 (295)
++. ..+.|+ +|++++...|+|++.|||+. ..+|++||+++++++.+++++|.+++.+
T Consensus 342 ~~~~~~~~g~-td~~~~~~~gip~v~~Gp~~-~~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 342 EPKVGGIGGG-TVAAFLRKKGYPAVVWSTLD-ETAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred CceeeeecCc-HHHHHHHHcCCCEEEeCCcc-ccCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 543 345555 69999988899999999994 6899999999999999999999998864
No 15
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.1e-36 Score=274.53 Aligned_cols=252 Identities=17% Similarity=0.226 Sum_probs=205.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
++|++. .++++|.|+|++|||.|+ .|++++++++. .++|++++++|+...++.+++|..+++|+++|+++|+
T Consensus 111 ~~l~~~--~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~ep~~~~~~~~~~G~~~~~v~v~G~~~Hs 182 (364)
T TIGR01892 111 PDLAAE--QLKKPLHLALTADEEVGC---TGAPKMIEAGA---GRPRHAIIGEPTRLIPVRAHKGYASAEVTVRGRSGHS 182 (364)
T ss_pred HHHHhc--CcCCCEEEEEEeccccCC---cCHHHHHHhcC---CCCCEEEECCCCCceeEEeeceEEEEEEEEEcccccc
Confidence 456554 468899999999999987 79999998865 3568999999998877889999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCC-CCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFE-TPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
+.|+.|.||+..+++++.+|+++... +... .....|. +.++++++.|+ ||...|+||++|++.+|+|+.|+++.+
T Consensus 183 ~~p~~g~nAi~~~~~~i~~l~~~~~~-~~~~--~~~~~~~~~~~~~~i~~i~-gg~~~nviP~~~~~~~diR~~p~~~~~ 258 (364)
T TIGR01892 183 SYPDSGVNAIFRAGRFLQRLVHLADT-LLRE--DLDEGFTPPYTTLNIGVIQ-GGKAVNIIPGACEFVFEWRPIPGMDPE 258 (364)
T ss_pred cCCccCcCHHHHHHHHHHHHHHHHHH-hccC--CCCccCCCCCceEEEeeee-cCCCCcccCCeEEEEEEeecCCCCCHH
Confidence 99999999999999999999875321 1100 0011122 24689999998 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceecc
Q 022583 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSIT 240 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~ 240 (295)
++.++|++.+++.... ..+.+++++....+|++..++++++++.+++++ +.++.. ..
T Consensus 259 ~v~~~i~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~-~~ 315 (364)
T TIGR01892 259 ELLQLLETIAQALVRD------------------EPGFEVQIEVVSTDPGVNTEPDAELVAFLEELS----GNAPEV-VS 315 (364)
T ss_pred HHHHHHHHHHHHHHhh------------------CCCceEEEEEccCCCCcCCCCCCHHHHHHHHHh----CCCCce-ec
Confidence 9999999999875321 113566676666789998999999999887653 443332 33
Q ss_pred CCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHH
Q 022583 241 GTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSI 289 (295)
Q Consensus 241 gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~ 289 (295)
++ +|+++++..|+|++.||||....+|++||+++++++.+++++|.++
T Consensus 316 ~~-tD~~~~~~~gip~v~~Gpg~~~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 316 YG-TEAPQFQELGAEAVVCGPGDIRQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred cc-ccHHHHHhCCCcEEEECCCChHhCCCCCceeeHHHHHHHHHHHHHh
Confidence 45 4899998899999999999767899999999999999999999876
No 16
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=3.7e-36 Score=275.90 Aligned_cols=269 Identities=19% Similarity=0.200 Sum_probs=212.7
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecC--
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKL-- 78 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~-- 78 (295)
+++|++.+..++++|.|+|++|||.|+ .|++++++++. .+|++|+.||+... +++++|...++++++|..
T Consensus 130 ~~~l~~~~~~~~~~v~~~~~~dEE~g~---~G~~~~~~~~~----~~d~~i~~ep~~~~-~~~~~G~~~~~~~v~g~~~~ 201 (421)
T PRK08596 130 IQLLHEAGIELPGDLIFQSVIGEEVGE---AGTLQCCERGY----DADFAVVVDTSDLH-MQGQGGVITGWITVKSPQTF 201 (421)
T ss_pred HHHHHHcCCCCCCcEEEEEEeccccCC---cCHHHHHhcCC----CCCEEEECCCCCCc-cccccceeeEEEEEEeeccc
Confidence 356788888889999999999999987 79999998753 46899999998765 489999988888888763
Q ss_pred --------CCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCC-CCCccccceeeecCCCCcceeCCeeEEEE
Q 022583 79 --------FHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGF-ETPSTMKPTQWSYPGGGINQIPGECTVSG 149 (295)
Q Consensus 79 --------~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~i~~gg~~~n~iP~~~~~~~ 149 (295)
+|++.|+.|.||+..++++|.+|+++... +.... ....+ ...++++++.|+ ||...|+||++|++.+
T Consensus 202 ~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~-~~~~~--~~~~~~~~~~t~~v~~i~-gG~~~nvvP~~~~~~~ 277 (421)
T PRK08596 202 HDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERH-WAVMK--SYPGFPPGTNTINPAVIE-GGRHAAFIADECRLWI 277 (421)
T ss_pred ccccccccccccCCccCcCHHHHHHHHHHHHHHHHHH-Hhhcc--cCccCCCCCcceeeeeee-CCCCCCccCceEEEEE
Confidence 79999999999999999999999875311 10000 00111 124789999998 9999999999999999
Q ss_pred EEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEE------Ee-ccCCCccccCCCCHHHHH
Q 022583 150 DVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTL------TF-DEATNGVACNLDSRGFHV 222 (295)
Q Consensus 150 ~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~p~~~~~~~~~~~~~ 222 (295)
|+|+.|+++.+++.++|++.+.+......+++ .....+++ +. ...+|++.+++++|++++
T Consensus 278 d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 344 (421)
T PRK08596 278 TVHFYPNETYEQVIKEIEEYIGKVAAADPWLR-------------ENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKT 344 (421)
T ss_pred EeeeCCCCCHHHHHHHHHHHHHHHHhcChhhh-------------hCCceeEEecccccccccccCCCccCCCCchHHHH
Confidence 99999999999999999999987532100000 00012221 11 124799999999999999
Q ss_pred HHHHHHHHhCCCCce-eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 223 LCKATEEVVGHVNPY-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 223 ~~~a~~~~~g~~~~~-~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+.+++++.+|.++.. ...++ +|++++..+|+|++.||||....+|++||++++++|.++++++..++.+||.
T Consensus 345 l~~a~~~~~g~~~~~~~~~g~-tD~~~~~~~gip~v~~Gpg~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~ 417 (421)
T PRK08596 345 LSSAHESVLSKNAILDMSTTV-TDGGWFAEFGIPAVIYGPGTLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCH 417 (421)
T ss_pred HHHHHHHHhCCCCeeeEEeee-cchhhhhhcCCCEEEECCCcccccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 999999998876543 33444 6999998899999999999767899999999999999999999999999873
No 17
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=3e-36 Score=274.83 Aligned_cols=270 Identities=15% Similarity=0.126 Sum_probs=206.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccC-CCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENS-AITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g-~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+..++++|.|+|++|||.+ + .|+++++++.. +++|+++++|++...+.++++|..+++|+++|+++|
T Consensus 123 ~~l~~~~~~~~~~i~~~~~~~EE~~~g---~~~~~~~~~~~---~~~d~~i~~e~~~~~i~~~~~G~~~~~v~v~G~~~H 196 (399)
T PRK13004 123 KIIKDLGLDDEYTLYVTGTVQEEDCDG---LCWRYIIEEDK---IKPDFVVITEPTDLNIYRGQRGRMEIRVETKGVSCH 196 (399)
T ss_pred HHHHhcCCCCCCeEEEEEEcccccCcc---hhHHHHHHhcC---CCCCEEEEccCCCCceEEecceEEEEEEEEeccccc
Confidence 5677778778999999999999964 3 57888887632 457999999999888999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 81 s~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
++.|+.|.||+..+++++.+|++.... +. ...+....+++++.|..|+...|+||++|++.+|+|+.|+++++
T Consensus 197 a~~p~~g~nAi~~~~~~i~~l~~~~~~-~~------~~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~ 269 (399)
T PRK13004 197 GSAPERGDNAIYKMAPILNELEELNPN-LK------EDPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWE 269 (399)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhhccc-cc------cCCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHH
Confidence 999999999999999999999876321 10 01122346788999873345899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhh-cc-ccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-
Q 022583 161 DVMKRLQEYVDDINENIE-KL-DTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY- 237 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~- 237 (295)
++.+.+++.+........ ++ ....| . -..+.++....+|++.+++++++++.+.+++++.+|.++..
T Consensus 270 ~v~~~i~~~~~~~~~~~~v~~~~~~~~---------~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~~~ 339 (399)
T PRK13004 270 SVLAEIRALPAVKKANAKVSMYNYDRP---------S-YTGLVYPTECYFPTWLYPEDHEFVKAAVEAYKGLFGKAPEVD 339 (399)
T ss_pred HHHHHHHHHHhhccccceEEEecccCC---------C-cccccccccccccccccCCCCHHHHHHHHHHHHHhCCCCeec
Confidence 999999888432110000 00 00000 0 00012233345789999999999999999999998865432
Q ss_pred eccCCchhhHhh-hhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 238 SITGTLPLIREL-QDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 238 ~~~gg~~d~~~~-~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
...+++ |+..+ +.+|+|++.||||....+|++||++++++|.+++++|.+++.+||+
T Consensus 340 ~~~~~t-d~~~~~~~~Gip~v~~Gpg~~~~aH~~nE~i~i~~l~~~~~~~~~~~~~~~~ 397 (399)
T PRK13004 340 KWTFST-NGVSIAGRAGIPTIGFGPGKEPLAHAPNEYTWKEQLVKAAAMYAAIPKSLLK 397 (399)
T ss_pred cccccc-CCeEEehhcCCCEEEECCCcccccCCCCceeEHHHHHHHHHHHHHHHHHHhh
Confidence 223333 33334 4579999999999766899999999999999999999999999984
No 18
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=275.40 Aligned_cols=252 Identities=16% Similarity=0.136 Sum_probs=206.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC--CCceeeccceeeEEEEEEecCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~--~~~~~~~~g~~~~~v~v~G~~~ 79 (295)
+.|++.+..++++|.|+|++|||.|+ .|++++++++. .+.+++++.||+. +.+.++++|..+++|+++|+++
T Consensus 142 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~g~~~~~~~~~---~~~~~~i~~ep~~~~~~v~~~~kG~~~~~v~v~G~~a 215 (402)
T PRK07338 142 LAFERSPLADKLGYDVLINPDEEIGS---PASAPLLAELA---RGKHAALTYEPALPDGTLAGARKGSGNFTIVVTGRAA 215 (402)
T ss_pred HHHHhcCCCCCCCEEEEEECCcccCC---hhhHHHHHHHh---ccCcEEEEecCCCCCCcEEeecceeEEEEEEEEeEcc
Confidence 56777777788999999999999987 69999998754 2457899999974 5677899999999999999999
Q ss_pred CcCC-CCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCC
Q 022583 80 HSGL-PHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (295)
Q Consensus 80 Hs~~-p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~ 158 (295)
|++. |+.|.||+..+++++++|+++.. .. ...|++++.|+ ||...|+||++|++.+|+|+.|+++
T Consensus 216 Hs~~~p~~g~nAi~~~~~~i~~l~~l~~-~~------------~~~t~~vg~i~-gG~~~nvVP~~a~~~~d~R~~~~~~ 281 (402)
T PRK07338 216 HAGRAFDEGRNAIVAAAELALALHALNG-QR------------DGVTVNVAKID-GGGPLNVVPDNAVLRFNIRPPTPED 281 (402)
T ss_pred cCCCCcccCccHHHHHHHHHHHHHhhhc-cC------------CCcEEEEEEEe-cCCCCceeccccEEEEEeccCCHHH
Confidence 9996 89999999999999999988532 11 13689999998 8999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCC-HHHHHHHHHHHHHhCCCCce
Q 022583 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDS-RGFHVLCKATEEVVGHVNPY 237 (295)
Q Consensus 159 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~a~~~~~g~~~~~ 237 (295)
.+++.+++++.+++... ..+++++++....+||+..++++ ++++.++++.++ +|.++..
T Consensus 282 ~~~v~~~i~~~~~~~~~-------------------~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~-~g~~~~~ 341 (402)
T PRK07338 282 AAWAEAELKKLIAQVNQ-------------------RHGVSLHLHGGFGRPPKPIDAAQQRLFEAVQACGAA-LGLTIDW 341 (402)
T ss_pred HHHHHHHHHHHHhcccc-------------------CCCeEEEEEccccCCCCCCCcchHHHHHHHHHHHHH-cCCCccc
Confidence 98888888888876532 11345555433357887766655 799999887766 5755433
Q ss_pred -eccCCchhhHhhhhcCCCeE-EEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 238 -SITGTLPLIRELQDEGFDVQ-TAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 238 -~~~gg~~d~~~~~~~g~p~v-~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
.+.|+ +|++++...|+|++ .|||| ...+|++|||+++++|.+++++++.++.+|+.
T Consensus 342 ~~~~g~-tDa~~~~~~giP~v~~~Gpg-~~~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 342 KDSGGV-CDGNNLAAAGLPVVDTLGVR-GGNIHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred ccCCcc-chHHHHhhcCCCeEeccCCC-CCCCCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 34455 59999988899999 69998 46789999999999999999999999999863
No 19
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=276.53 Aligned_cols=269 Identities=20% Similarity=0.218 Sum_probs=207.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----CceeeccceeeEEEEEEe
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~~~~~~~g~~~~~v~v~G 76 (295)
+.|++.+..++++|.|+|++|||.|+ .|+.+++++.. +.+++|++|++||+.. .+++++||.++++|+++|
T Consensus 133 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~g~~~~l~~~~-~~~~~d~~ii~e~~~~~~~~~~i~~g~kG~~~~~l~v~G 208 (456)
T PRK08201 133 EALLKVEGTLPVNVKFCIEGEEEIGS---PNLDSFVEEEK-DKLAADVVLISDTTLLGPGKPAICYGLRGLAALEIDVRG 208 (456)
T ss_pred HHHHHhcCCCCCCEEEEEEcccccCC---ccHHHHHHhhH-HhccCCEEEEeCCCcCCCCCEEEEEecCCeEEEEEEEEe
Confidence 45655556678899999999999998 68988887642 2245789999998753 378999999999999999
Q ss_pred cCC--CcCCCC-CCCCHHHHHHHHHHHHHhhhcc--------CCCCCCcc-------------------c-ccCC-----
Q 022583 77 KLF--HSGLPH-KAINPLELAMEALKVIQTRFYK--------DFPPHPKE-------------------Q-VYGF----- 120 (295)
Q Consensus 77 ~~~--Hs~~p~-~g~nai~~~~~~i~~l~~~~~~--------~~~~~~~~-------------------~-~~~~----- 120 (295)
+++ ||+.|. .+.|||..|+++|++|++.... .+.+.... . ..-+
T Consensus 209 ~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (456)
T PRK08201 209 AKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGY 288 (456)
T ss_pred CCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcch
Confidence 998 999755 4579999999999999763110 00000000 0 0000
Q ss_pred ------CCCccccceeeecCCC----CcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccc
Q 022583 121 ------ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYV 190 (295)
Q Consensus 121 ------~~~~t~~~~~i~~gg~----~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 190 (295)
....|++++.|+ ||. ..|+||++|++.+|+|+.|+++.+++.+.|++.+.+..
T Consensus 289 ~~~~~~~~~~t~~i~~i~-gg~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~---------------- 351 (456)
T PRK08201 289 TALERTWARPTLELNGVY-GGFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT---------------- 351 (456)
T ss_pred HHHHHHHhCCcEEEEeee-cCCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC----------------
Confidence 012478888887 553 37999999999999999999999999999999987631
Q ss_pred cCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCch--hhHhhhhcCCCeEEEcCCC-CCcC
Q 022583 191 LPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLP--LIRELQDEGFDVQTAGYGL-MATY 267 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~--d~~~~~~~g~p~v~~gpg~-~~~~ 267 (295)
..+++++++....+||+.++.++++++.+.+++++.+|.++.....+++. |+.++...|+|++.||||. ..++
T Consensus 352 ----~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~gg~~~~~~~~~~~~gip~v~~GpG~~~~~~ 427 (456)
T PRK08201 352 ----PAGVRVTIRRFDKGPAFVAPIDHPAIQAAARAYEAVYGTEAAFTRMGGSIPVVETFSSQLHIPIVLMGFGLPSENF 427 (456)
T ss_pred ----CCCeEEEEEECCCcCceecCCCCHHHHHHHHHHHHHhCCCceecCCCCcHHHHHHHHHHhCCCEEEecCCCCCCCC
Confidence 11345555555568999999999999999999999998765554444532 5666666899999999995 4689
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 268 HADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 268 H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
|++||||++++|.+++++|..++.++++
T Consensus 428 H~~nE~v~i~~l~~~~~~l~~~~~~~~~ 455 (456)
T PRK08201 428 HAPNEHFHLENFDKGLRTLVEYWHQLAE 455 (456)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999864
No 20
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-35 Score=266.94 Aligned_cols=245 Identities=13% Similarity=0.102 Sum_probs=190.0
Q ss_pred CceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCcCCC-CCCCC
Q 022583 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLP-HKAIN 89 (295)
Q Consensus 11 ~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs~~p-~~g~n 89 (295)
++++|.|+|++|||.|+. .|++++++++. ++|++|++||+...+++++||..+++|+++|+++|+|.| +.|+|
T Consensus 117 ~~~~v~~~~~~dEE~g~~--~g~~~~~~~~~----~~~~~iv~Ept~~~~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~N 190 (364)
T PRK08737 117 GDGDAAFLFSSDEEANDP--RCVAAFLARGI----PYEAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPSAS 190 (364)
T ss_pred cCCCEEEEEEcccccCch--hhHHHHHHhCC----CCCEEEEcCCCCceeEEecceeEEEEEEEEeeccccCCCcccCCC
Confidence 567999999999999863 48899988653 468999999999989999999999999999999999998 68999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHH
Q 022583 90 PLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEY 169 (295)
Q Consensus 90 ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~ 169 (295)
||..++++|.++.+.......+. ... ..+.+++++.|+ ||...|+||++|++.+|+|+.|+++.+++.+++++.
T Consensus 191 AI~~~~~~l~~~~~~~~~~~~~~----~~~-~~~~t~~vg~i~-GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~ 264 (364)
T PRK08737 191 ALHQAMRWGGQALDHVESLAHAR----FGG-LTGLRFNIGRVE-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGF 264 (364)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhc----cCC-CCCCceEEeeEe-cCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHH
Confidence 99999999988765422211100 000 123689999998 999999999999999999999999999999998766
Q ss_pred HHHhhhhhhccccCCCCcccccCCCCcceeEEEEe-ccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhhHh
Q 022583 170 VDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTF-DEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIRE 248 (295)
Q Consensus 170 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~~~ 248 (295)
++... ..++++. ...+|++..++ ++++..+.+.+.+..+.+......++ +|+++
T Consensus 265 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-tDa~~ 319 (364)
T PRK08737 265 AEPAA-----------------------ATFEETFRGPSLPSGDIAR-AEERRLAARDVADALDLPIGNAVDFW-TEASL 319 (364)
T ss_pred HHHcC-----------------------CceEEEeccCCCCCcccCc-chHHHHHHHHHHhhhcCCCCceeccc-cCHHH
Confidence 65410 2233332 22466665554 36676555544444454432233344 69999
Q ss_pred hhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHh
Q 022583 249 LQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQ 292 (295)
Q Consensus 249 ~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~ 292 (295)
|...|+|++.||||...++|++||+|++++|.+++++|.+++.+
T Consensus 320 ~~~~Gip~v~~GpG~~~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 320 FSAAGYTALVYGPGDIAQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred HHHcCCCEEEECCCChhhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 98899999999999767899999999999999999999998754
No 21
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.9e-35 Score=268.35 Aligned_cols=256 Identities=21% Similarity=0.242 Sum_probs=205.0
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
+.|++. .++++|.|+|++|||.|+ .|++++++++. +++|++|+++|+...++++++|.++++|+++|+++|+
T Consensus 124 ~~l~~~--~~~~~i~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~ep~~~~~~~~~~G~~~~~i~v~G~~~H~ 195 (383)
T PRK05111 124 RDIDLT--KLKKPLYILATADEETSM---AGARAFAEATA---IRPDCAIIGEPTSLKPVRAHKGHMSEAIRITGQSGHS 195 (383)
T ss_pred HHHhhc--CCCCCeEEEEEeccccCc---ccHHHHHhcCC---CCCCEEEEcCCCCCceeecccceEEEEEEEEeechhc
Confidence 344443 467899999999999987 79999998754 3458999999998878889999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCC-CCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGF-ETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 82 ~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
+.|+.|.||+..+++++.+|+.+... +.... ....| ....|++++.|+ ||...|+||++|++.+|+|+.|+++.+
T Consensus 196 ~~p~~g~nai~~~~~~i~~l~~~~~~-~~~~~--~~~~~~~~~~t~~i~~i~-gg~~~NvVP~~~~~~~diR~~p~~~~~ 271 (383)
T PRK05111 196 SDPALGVNAIELMHDVIGELLQLRDE-LQERY--HNPAFTVPYPTLNLGHIH-GGDAPNRICGCCELHFDIRPLPGMTLE 271 (383)
T ss_pred cCCccCcCHHHHHHHHHHHHHHHHHH-HhccC--CCccCCCCCCceeEeeee-cCCcCcccCCceEEEEEEecCCCCCHH
Confidence 99999999999999999999875311 10000 00111 124689999998 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEec-cCCCccccCCCCHHHHHHHHHHHHHhCCCCceec
Q 022583 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD-EATNGVACNLDSRGFHVLCKATEEVVGHVNPYSI 239 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~ 239 (295)
++.+.+++.++++... ++..++++.. ..+|++..+.++++++.+.+++ |.++.. .
T Consensus 272 ~v~~~i~~~i~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----g~~~~~-~ 327 (383)
T PRK05111 272 DLRGLLREALAPVSER-------------------WPGRITVAPLHPPIPGYECPADHQLVRVVEKLL----GHKAEV-V 327 (383)
T ss_pred HHHHHHHHHHHHHHhh-------------------CCCeEEEeccccCCCCcCCCCCCHHHHHHHHHh----CCCCce-e
Confidence 9999999999876443 1345555433 3578888888888888876654 544322 2
Q ss_pred cCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 240 TGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 240 ~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.++ +|+.+++..|+|++.||||...++|++||++++++|.+++++|.+++.+||
T Consensus 328 ~~~-~Da~~~~~~g~p~v~~G~g~~~~~H~~~E~v~~~~l~~~~~i~~~~~~~~~ 381 (383)
T PRK05111 328 NYC-TEAPFIQQLGCPTLVLGPGSIEQAHQPDEYLELSFIKPTRELLRQLIHHFC 381 (383)
T ss_pred eee-ccHHHHHhcCCCEEEECCCchHhCcCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 345 489888888999999999965689999999999999999999999999986
No 22
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=6.5e-36 Score=272.82 Aligned_cols=265 Identities=17% Similarity=0.186 Sum_probs=200.9
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEec-----CCC-CCceeeccceeeEEEEEE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TAD-KQPCIGTGGMIPWKLHVT 75 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e-----~~~-~~~~~~~~g~~~~~v~v~ 75 (295)
+.|++.+..++++|.|+|++|||.|+. .|++++++++.+... |++++.+ |+. ..++++++|.++++|+++
T Consensus 125 ~~l~~~~~~~~~~v~l~~~~dEE~g~~--~G~~~~~~~~~~~~~--~~~~~~d~g~~~~~~~~~i~~~~kG~~~~~l~v~ 200 (400)
T TIGR01880 125 RNLKASGFKFKRTIHISFVPDEEIGGH--DGMEKFAKTDEFKAL--NLGFALDEGLASPDDVYRVFYAERVPWWVVVTAP 200 (400)
T ss_pred HHHHHcCCCCCceEEEEEeCCcccCcH--hHHHHHHHhhhccCC--ceEEEEcCCCcccccccceeEEeeEEEEEEEEEe
Confidence 567777778899999999999999862 499999987654443 4445443 333 367889999999999999
Q ss_pred ecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCC
Q 022583 76 GKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTP 155 (295)
Q Consensus 76 G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~ 155 (295)
|+++|++.+. +.||+..|++++..|+++....+..........+...+|++++.|+ ||...|+||++|++.+|+|+.|
T Consensus 201 G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~-gG~~~nvIP~~a~~~~diR~~p 278 (400)
T TIGR01880 201 GNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKLK-GGVQSNVIPSEAEAGFDIRLAP 278 (400)
T ss_pred cCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccccccceeecceec-cCCcCCcCCCccEEEEEEeeCC
Confidence 9999999864 4699999999999887642111100000000111124799999998 9999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCC-ccccCCCCHHHHHHHHHHHHHhCCC
Q 022583 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATN-GVACNLDSRGFHVLCKATEEVVGHV 234 (295)
Q Consensus 156 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~a~~~~~g~~ 234 (295)
+++.+++.+.|++.+++... +++++++.....| +...+.++++++.+++++++.....
T Consensus 279 ~~~~~~~~~~i~~~i~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~~~~ 337 (400)
T TIGR01880 279 SVDFEEMENRLDEWCADAGE---------------------GVTYEFSQHSGKPLVTPHDDSNPWWVAFKDAVKEMGCTF 337 (400)
T ss_pred CCCHHHHHHHHHHHHhccCC---------------------ceEEEEeecCCCCCCCCCCCCCHHHHHHHHHHHHcCCee
Confidence 99999999999888885311 2445544333333 3445678899999999999863333
Q ss_pred CceeccCCchhhHhhhhcCCCeEEEcCCCC--CcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 235 NPYSITGTLPLIRELQDEGFDVQTAGYGLM--ATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 235 ~~~~~~gg~~d~~~~~~~g~p~v~~gpg~~--~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.+..+.|+ +|+++++..|+|++.||||.. ..+|++||++++++|.+++++|.+++.+++
T Consensus 338 ~~~~~~g~-tDa~~~~~~gip~v~fgp~~~~~~~aH~~dE~i~i~~l~~~~~~~~~~l~~~~ 398 (400)
T TIGR01880 338 KPEILPGS-TDSRYIRAAGVPALGFSPMNNTPVLLHDHNEFLNEAVFLRGIEIYQTLISALA 398 (400)
T ss_pred cceeecCc-chHHHHHhCCCCeEEECCccCCcccccCCCCceEHHHHHHHHHHHHHHHHHhh
Confidence 34556666 589999889999999999853 368999999999999999999999999885
No 23
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=2.1e-35 Score=264.63 Aligned_cols=240 Identities=19% Similarity=0.166 Sum_probs=193.5
Q ss_pred cCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-CceeeccceeeEEEEEEecCCCcCCCCC
Q 022583 8 KLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLFHSGLPHK 86 (295)
Q Consensus 8 ~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-~~~~~~~g~~~~~v~v~G~~~Hs~~p~~ 86 (295)
+..++++|.|+|++|||.|+ .|...++.+.. ++|++|++||+.. .++++++|..+++|+++|+++|||.|
T Consensus 107 ~~~~~~~i~~~~~~dEE~g~---~~~~~~l~~~~----~~d~~iv~Ept~~~~i~~~~kG~~~~~l~~~G~~~Hss~~-- 177 (348)
T PRK04443 107 EALVRARVSFVGAVEEEAPS---SGGARLVADRE----RPDAVIIGEPSGWDGITLGYKGRLLVTYVATSESFHSAGP-- 177 (348)
T ss_pred cccCCCCEEEEEEcccccCC---hhHHHHHHhcc----CCCEEEEeCCCCccceeeecccEEEEEEEEEeCCCccCCC--
Confidence 45688999999999999988 56666655442 5789999999874 68899999999999999999999987
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHH
Q 022583 87 AINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRL 166 (295)
Q Consensus 87 g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i 166 (295)
|.||+..|++++++|++..... . ....+..+.+++++.|+ . ..|+||++|++.+|+|+.|+++.+++.+++
T Consensus 178 g~NAi~~~~~~l~~l~~~~~~~-~-----~~~~~~~~~~~~i~~i~-~--~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i 248 (348)
T PRK04443 178 EPNAAEDAIEWWLAVEAWFEAN-D-----GRERVFDQVTPKLVDFD-S--SSDGLTVEAEMTVGLRLPPGLSPEEAREIL 248 (348)
T ss_pred CCCHHHHHHHHHHHHHHHHhcC-c-----cccccccccceeeeEEe-c--CCCCCCceEEEEEEEccCCCCCHHHHHHHH
Confidence 7999999999999998753210 1 11122234677888886 3 469999999999999999999999988888
Q ss_pred HHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhh
Q 022583 167 QEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLI 246 (295)
Q Consensus 167 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~ 246 (295)
++.+.. . ++++...+||+..+.++|+++.+.+++++.++.+......|+ +|+
T Consensus 249 ~~~~~~-------------------------~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~-tD~ 300 (348)
T PRK04443 249 DALLPT-------------------------G--TVTFTGAVPAYMVSKRTPLARAFRVAIREAGGTPRLKRKTGT-SDM 300 (348)
T ss_pred HHhCCC-------------------------c--EEEEecCCCceecCCCCHHHHHHHHHHHHhcCCcceeccccC-CcH
Confidence 777631 2 234445689999999999999999999998765433334445 588
Q ss_pred Hhhhh-cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 247 RELQD-EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 247 ~~~~~-~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
++|.+ .|+|++.||||...++|++|||+++++|.+++++|.+++.+|
T Consensus 301 ~~~~~~~gip~v~~Gpg~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 301 NVVAPAWGCPMVAYGPGDSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred HHHhhhcCCCEEEECCCCccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 88876 699999999997667899999999999999999999999764
No 24
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=3.1e-35 Score=268.76 Aligned_cols=252 Identities=21% Similarity=0.212 Sum_probs=205.7
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC--CCceeeccceeeEEEEEEecCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~--~~~~~~~~g~~~~~v~v~G~~~ 79 (295)
+.|++.+.+++++|.|+|++|||.|+ .|+++++++.. .++|++|+.||+. +.+.++++|..+++|+++|+++
T Consensus 149 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~G~~~~~~~~~---~~~d~~i~~ep~~~~~~v~~~~~G~~~~~v~v~G~~~ 222 (410)
T PRK06133 149 KILQQLGFKDYGTLTVLFNPDEETGS---PGSRELIAELA---AQHDVVFSCEPGRAKDALTLATSGIATALLEVKGKAS 222 (410)
T ss_pred HHHHHcCCCCCCCEEEEEECCcccCC---ccHHHHHHHHh---ccCCEEEEeCCCCCCCCEEEeccceEEEEEEEEeecc
Confidence 46777777788999999999999987 79999997643 2468999999987 3688999999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCC
Q 022583 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (295)
Q Consensus 80 Hs~-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~ 158 (295)
|++ .|+.|.||+..+++++..|+++.. .. ...+++++.|+ ||...|+||++|++.+|+|+.|.++
T Consensus 223 Hsg~~p~~g~nAi~~~~~~i~~l~~~~~-~~------------~~~t~~~~~i~-gG~~~nvIP~~~~~~~diR~~~~~~ 288 (410)
T PRK06133 223 HAGAAPELGRNALYELAHQLLQLRDLGD-PA------------KGTTLNWTVAK-AGTNRNVIPASASAQADVRYLDPAE 288 (410)
T ss_pred ccCCCcccCcCHHHHHHHHHHHHHhccC-CC------------CCeEEEeeEEE-CCCCCceeCCccEEEEEEEECCHHH
Confidence 986 799999999999999999987531 11 13678999998 9999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCC-HHHHHHHHHHHHHhCCC-Cc
Q 022583 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDS-RGFHVLCKATEEVVGHV-NP 236 (295)
Q Consensus 159 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~a~~~~~g~~-~~ 236 (295)
.+++.+.+++.+++.. ..+.++++++...+||+..+++. ++++.+.+++++. +.+ .+
T Consensus 289 ~~~v~~~i~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 347 (410)
T PRK06133 289 FDRLEADLQEKVKNKL--------------------VPDTEVTLRFERGRPPLEANAASRALAEHAQGIYGEL-GRRLEP 347 (410)
T ss_pred HHHHHHHHHHHHhccC--------------------CCCeEEEEEeccccCCcccCcchHHHHHHHHHHHHHc-CCCccc
Confidence 9888888888887621 11456667766678998777765 5777777777663 533 22
Q ss_pred --eeccCCchhhHhhhhcCCCeEEEcCCC-CCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 237 --YSITGTLPLIRELQDEGFDVQTAGYGL-MATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 237 --~~~~gg~~d~~~~~~~g~p~v~~gpg~-~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
....|+ +|+++++..|+|++++|+|. ..++|++||+++++++.++++++.+++.+||.
T Consensus 348 ~~~~~~g~-tDa~~~~~~gip~v~~g~G~~~~~aH~~nE~i~i~~~~~~~~~~~~~~~~~~~ 408 (410)
T PRK06133 348 IDMGTGGG-TDAAFAAGSGKAAVLEGFGLVGFGAHSNDEYIELNSIVPRLYLLTRMIMELSR 408 (410)
T ss_pred cccCCCCC-chHHHHHhcCCCceEecccCCCCCCCCCCcEEEcccHHHHHHHHHHHHHHhhc
Confidence 334566 58999998999999976664 35799999999999999999999999999873
No 25
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.8e-34 Score=257.85 Aligned_cols=240 Identities=18% Similarity=0.212 Sum_probs=194.1
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCcCCCCCCCC
Q 022583 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (295)
Q Consensus 10 ~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs~~p~~g~n 89 (295)
+++++|.|+|++|||.++.. .|+++++.+.. ...++|++|++||+...++++++|..+++|+++|+++|+|.|+.|+|
T Consensus 112 ~~~~~i~~~~~~~EE~~~~~-~G~~~~~~~~~-~~~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~n 189 (352)
T PRK13007 112 EPAHDLTLVFYDCEEVEAEA-NGLGRLAREHP-EWLAGDFAILLEPTDGVIEAGCQGTLRVTVTFHGRRAHSARSWLGEN 189 (352)
T ss_pred ccCCCeEEEEEecccccCCc-ccHHHHHHhcc-cccCCCEEEEecCCCCceEeeccceEEEEEEEEecccccCCCccCcC
Confidence 57889999999999986521 38999987542 23467999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHH
Q 022583 90 PLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEY 169 (295)
Q Consensus 90 ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~ 169 (295)
|+..++++|.+|++........ .......+++++.|+ ||...|+||++|++.+|+|+.|+++.+++.+++++.
T Consensus 190 Ai~~~~~~i~~l~~~~~~~~~~------~~~~~~~~~~~~~i~-gG~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~ 262 (352)
T PRK13007 190 AIHKAAPVLARLAAYEPREVVV------DGLTYREGLNAVRIS-GGVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREV 262 (352)
T ss_pred HHHHHHHHHHHHHHhccccccc------CCCCccceeEeEeEe-cCCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHH
Confidence 9999999999998753222111 011113578999998 999999999999999999999999999999888877
Q ss_pred HHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhhHhh
Q 022583 170 VDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIREL 249 (295)
Q Consensus 170 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~~~~ 249 (295)
+... + ++++...++++..+.++++++.+.+++ |..+. ...|+ +|++++
T Consensus 263 ~~~~-----------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~-~~~g~-td~~~~ 310 (352)
T PRK13007 263 FDGF-----------------------A---EVEVTDLAPGARPGLDHPAAAALVAAV----GGEVR-AKYGW-TDVARF 310 (352)
T ss_pred hccc-----------------------c---EEEeecccCCCCCCCCCHHHHHHHHHh----CCCCc-ccccc-chHHHH
Confidence 6532 1 344444567777888999999888863 43322 23445 478888
Q ss_pred hhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHH
Q 022583 250 QDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSII 290 (295)
Q Consensus 250 ~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l 290 (295)
...|+|++.||||...++|++||++++++|.++++++.+++
T Consensus 311 ~~~Gip~v~~Gpg~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 311 SALGIPAVNFGPGDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred HhCCCCEEEeCCCchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 88899999999997678999999999999999999999886
No 26
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=265.91 Aligned_cols=263 Identities=16% Similarity=0.176 Sum_probs=201.4
Q ss_pred hhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC------CceeeccceeeEEEEEEe
Q 022583 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK------QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 3 ~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~------~~~~~~~g~~~~~v~v~G 76 (295)
.|++.+ .++++|.|+|++|||.|+ .|+++++++.. ..+++|++| +||+.. .+++++||..+++++++|
T Consensus 117 ~l~~~~-~~~~~i~~~~~~dEE~g~---~g~~~~l~~~~-~~~~~d~vi-~E~~~~~~~~~~~i~~~~kG~~~~~l~v~G 190 (436)
T PRK06446 117 HLIDKH-KLNVNVKFLYEGEEEIGS---PNLEDFIEKNK-NKLKADSVI-MEGAGLDPKGRPQIVLGVKGLLYVELVLRT 190 (436)
T ss_pred HHHHcC-CCCCCEEEEEEcccccCC---HhHHHHHHHHH-HHhCCCEEE-ECCCCccCCCCeEEEEecCeEEEEEEEEEe
Confidence 444444 578899999999999998 78999887632 224568776 477754 678999999999999999
Q ss_pred --cCCCcCCCCCCCCHHHHHHHHHHHHHhhhcc----C----CCCCCc---------------------------cc---
Q 022583 77 --KLFHSGLPHKAINPLELAMEALKVIQTRFYK----D----FPPHPK---------------------------EQ--- 116 (295)
Q Consensus 77 --~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~----~----~~~~~~---------------------------~~--- 116 (295)
+++|+|.|+.|.||+..|+++|++|.+.... . +.+..+ ..
T Consensus 191 ~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 270 (436)
T PRK06446 191 GTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREK 270 (436)
T ss_pred CCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCccc
Confidence 9999999999999999999999999864200 0 000000 00
Q ss_pred -ccCCCCCccccceeeecCC----CCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCccccc
Q 022583 117 -VYGFETPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (295)
Q Consensus 117 -~~~~~~~~t~~~~~i~~gg----~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 191 (295)
........|+|++.|+ +| ...|+||++|++.+|+|+.|+++.+++.+.+++.+.+..
T Consensus 271 ~~~~~~~~~t~nv~~i~-~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~~~----------------- 332 (436)
T PRK06446 271 IAEALLTEPTCNIDGFY-SGYTGKGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQKVG----------------- 332 (436)
T ss_pred HHHHHHhCCcEEEeeee-ccccCCCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHHcC-----------------
Confidence 0001123688998887 54 467999999999999999999999999999999988631
Q ss_pred CCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-eccCCchhhHhhhh-cCCCeEE--EcCCC-CCc
Q 022583 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQD-EGFDVQT--AGYGL-MAT 266 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~-~~~gg~~d~~~~~~-~g~p~v~--~gpg~-~~~ 266 (295)
..+++++...++|+..+.++|+++.+++++++++|.++.. ...+|++|+++|.. +|+|++. +|||. ..+
T Consensus 333 ------~~~~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~~g~~d~~~~~~~~gip~v~~~~g~g~~~~~ 406 (436)
T PRK06446 333 ------FNGEIIVHGFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVIPNSAGTQPMGLFVYKLGIRDIVSAIGVGGYYSN 406 (436)
T ss_pred ------CCeEEEEcCCcceeecCCCCHHHHHHHHHHHHHhCCCCceecCCCCcchHHHHHHHhCCCcceeecccCCCCcC
Confidence 2345555556788889999999999999999998875433 23334456666654 7999875 66654 568
Q ss_pred CCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 267 YHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 267 ~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+|++||+|++++|.+++++|.+++.++++
T Consensus 407 ~H~~dE~i~i~~l~~~~~~~~~~~~~~~~ 435 (436)
T PRK06446 407 AHAPNENIRIDDYYKAIKHTEEFLKLYST 435 (436)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998864
No 27
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=2.7e-34 Score=259.38 Aligned_cols=246 Identities=15% Similarity=0.156 Sum_probs=188.5
Q ss_pred cCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCcCCCCCC
Q 022583 8 KLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKA 87 (295)
Q Consensus 8 ~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs~~p~~g 87 (295)
+..++++|.|+|++|||.++.. .|+++++++.. ...++|++|++||+...++++++|..+++|+++|+++|++.|+.|
T Consensus 124 ~~~~~~~i~~~~~~dEE~~~~~-~G~~~~~~~~~-~~~~~d~~iv~Ept~~~i~~g~~G~~~~~i~v~G~~~H~s~p~~g 201 (373)
T TIGR01900 124 ETELKHDLTLIAYDCEEVAAEK-NGLGHIRDAHP-DWLAADFAIIGEPTGGGIEAGCNGNIRFDVTAHGVAAHSARAWLG 201 (373)
T ss_pred ccCCCCCEEEEEEecccccCCC-CCHHHHHHhCc-ccccCCEEEEECCCCCcccccceeeEEEEEEEEeeccccCCCCCC
Confidence 4467899999999999986411 49999998642 223578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHH
Q 022583 88 INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQ 167 (295)
Q Consensus 88 ~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~ 167 (295)
.||+..|+++|.+|+++....... ..+....+++++.|+ ||...|+||++|++.+|+|+.|+++.+++.++|+
T Consensus 202 ~NAi~~~~~~i~~l~~l~~~~~~~------~~~~~~~t~~v~~I~-GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~ 274 (373)
T TIGR01900 202 DNAIHKAADIINKLAAYEAAEVNI------DGLDYREGLNATFCE-GGKANNVIPDEARMHLNFRFAPDKDLAEAKALMM 274 (373)
T ss_pred CCHHHHHHHHHHHHHHhhcccccc------cCCcccceEEEEEEe-CCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHH
Confidence 999999999999998753222110 011123688999998 9999999999999999999999999999999998
Q ss_pred HHHHHhh----hhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCc
Q 022583 168 EYVDDIN----ENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTL 243 (295)
Q Consensus 168 ~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~ 243 (295)
+.+++.. +++.+.. .+ .. ..+++++.....+++..+.++++++.+.++++++++.++.. ..+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~------~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~g~t 342 (373)
T TIGR01900 275 GADAGAELGNGEHVAEGG------EF----DG-QDGIEIAMEDEAGGALPGLGAPLAQDLIDAVGEEKGRDPLA-KFGWT 342 (373)
T ss_pred hhhhhhhhhHHHHHHhhc------cc----cc-cccceEEEcccCCCCCCCCCCHHHHHHHHHHHhccCCCccc-ccCCc
Confidence 7754421 0110000 00 00 01344444434556666778999999999999988865433 45564
Q ss_pred hhhHhhhhcCCCeEEEcCCCCCcCCCCCcccc
Q 022583 244 PLIRELQDEGFDVQTAGYGLMATYHADNEYCL 275 (295)
Q Consensus 244 ~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~ 275 (295)
|+++|...|+|++.||||...++|++||||+
T Consensus 343 -D~~~~~~~gip~v~~Gpg~~~~aH~~dE~v~ 373 (373)
T TIGR01900 343 -DVARFSALGIPALNFGAGDPLFAHKHDEQCP 373 (373)
T ss_pred -cHHHHHhcCCCEEEeCCCChhhccCCCCCCC
Confidence 8888887899999999997678999999985
No 28
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.5e-34 Score=260.44 Aligned_cols=244 Identities=15% Similarity=0.218 Sum_probs=199.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC--CCceeeccceeeEEEEEEecCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~--~~~~~~~~g~~~~~v~v~G~~~ 79 (295)
+.|++.+ .++++|.|+|++|||.|+ .|++.+++.. +++|++++.+++. +.++++++|..+++|+++|+++
T Consensus 113 ~~l~~~~-~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~g~~~~~i~~~G~~~ 184 (361)
T TIGR01883 113 DVLSTEE-TPHGTIEFIFTVKEELGL---IGMRLFDESK----ITAAYGYCLDAPGEVGNIQLAAPTQVKVDATIAGKDA 184 (361)
T ss_pred HHHHhcC-CCCCCEEEEEEcccccCc---hhHhHhChhh----cCcceeEEEeCCCCcceEEecCCceEEEEEEEEeeec
Confidence 4565554 578899999999999987 7999887643 3457788777654 5688899999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCC
Q 022583 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (295)
Q Consensus 80 Hs~-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~ 158 (295)
|++ .|+.|+||+..+++++.+|+.. ..++ ..+++++.|+ ||...|+||++|++.+++|..|..+
T Consensus 185 Ha~~~p~~g~nAi~~~~~~i~~l~~~---~~~~-----------~~~~~i~~i~-gG~~~nvVP~~~~~~~diR~~~~~~ 249 (361)
T TIGR01883 185 HAGLVPEDGISAISVARMAIHAMRLG---RIDE-----------ETTANIGSFS-GGVNTNIVQDEQLIVAEARSLSFRK 249 (361)
T ss_pred CCCCCcccCcCHHHHHHHHHHhcccc---CCCC-----------ccccccceee-cCCccCccCCceEEEEEEecCCHHH
Confidence 986 6999999999999999988652 1211 2578899998 9999999999999999999999888
Q ss_pred hHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-
Q 022583 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY- 237 (295)
Q Consensus 159 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~- 237 (295)
.+++++++++.+++.... ++.++++++...+|++.++.++++++.+.+++++ +|.++..
T Consensus 250 ~~~~~~~i~~~i~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~-~g~~~~~~ 309 (361)
T TIGR01883 250 AEAQVQTMRERFEQAAEK-------------------YGATLEEETRLIYEGFKIHPQHPLMNIFKKAAKK-IGLKTSEI 309 (361)
T ss_pred HHHHHHHHHHHHHHHHHH-------------------cCCEEEEEEEeccccccCCCCCHHHHHHHHHHHH-cCCCcEEE
Confidence 788888888888765432 1345566655668898888899999999999987 5755433
Q ss_pred eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHH
Q 022583 238 SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSII 290 (295)
Q Consensus 238 ~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l 290 (295)
.+.|+ +|+.++...|+|++.||||. ..+|++||+++++++..++++|.+++
T Consensus 310 ~~~g~-tD~~~~~~~giP~v~~G~g~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 310 FSGGG-SDANVLNEKGVPTVNLSAGY-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred ecCcc-cHHHHHhhCCCceEEECCCc-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 34555 58988888899999999996 68999999999999999999999886
No 29
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=8.7e-34 Score=263.27 Aligned_cols=268 Identities=19% Similarity=0.208 Sum_probs=204.5
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----CceeeccceeeEEEEEEe
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~~~~~~~g~~~~~v~v~G 76 (295)
+.|++.+..++++|.|+|++|||.|+ .|+++++.+.. +.+++|++|+.|++.. .+++++||.++++|+++|
T Consensus 141 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~g~~~~l~~~~-~~~~~d~~iv~E~~~~~~~~~~i~~~~kG~~~~~l~v~g 216 (464)
T PRK09104 141 RAWKAVTGSLPVRVTILFEGEEESGS---PSLVPFLEANA-EELKADVALVCDTGMWDRETPAITTSLRGLVGEEVTITA 216 (464)
T ss_pred HHHHHhcCCCCCcEEEEEECccccCC---ccHHHHHHhhH-HhcCCCEEEEeCCCCCCCCCeEEEeecCCeEEEEEEEEe
Confidence 56777666788899999999999998 68887776532 2245789999997642 477899999999999999
Q ss_pred --cCCCcCC-CCCCCCHHHHHHHHHHHHHhhhccCC---------CCCCc----------ccccCC--------------
Q 022583 77 --KLFHSGL-PHKAINPLELAMEALKVIQTRFYKDF---------PPHPK----------EQVYGF-------------- 120 (295)
Q Consensus 77 --~~~Hs~~-p~~g~nai~~~~~~i~~l~~~~~~~~---------~~~~~----------~~~~~~-------------- 120 (295)
+++||+. +..|.||+..|++++.+|++... .+ ..... .....|
T Consensus 217 ~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (464)
T PRK09104 217 ADRDLHSGLFGGAAANPIRVLTRILAGLHDETG-RVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKG 295 (464)
T ss_pred CCCCccccccCCccCCHHHHHHHHHHhccCCCC-CEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCccc
Confidence 6899996 68899999999999999976311 10 00000 000000
Q ss_pred -------CCCccccceeeecCCC----CcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCccc
Q 022583 121 -------ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKY 189 (295)
Q Consensus 121 -------~~~~t~~~~~i~~gg~----~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 189 (295)
...+|++++.|+ ||. ..|+||++|++.+|+|+.|+++++++.+.|++.+.+...
T Consensus 296 ~~~~~~~~~~~t~~i~~i~-gg~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~~-------------- 360 (464)
T PRK09104 296 RSVLEQIWSRPTCEINGIW-GGYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARLP-------------- 360 (464)
T ss_pred HHHHHHHhhCCeEEEeccc-cCCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCC--------------
Confidence 012578999998 664 479999999999999999999999999999998875311
Q ss_pred ccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCc-hhhHhhh-hcCCCeEEEcCCC-CCc
Q 022583 190 VLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTL-PLIRELQ-DEGFDVQTAGYGL-MAT 266 (295)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~-~d~~~~~-~~g~p~v~~gpg~-~~~ 266 (295)
.+.++++.....+||+.+++++++++.+.+++++.++.++.....+++ +++..|. ..|+|++.||||. ..+
T Consensus 361 ------~~~~v~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~gip~v~~g~G~~~~~ 434 (464)
T PRK09104 361 ------ADCSVEFHDHGGSPAIALPYDSPALAAAKAALSDEWGKPAVLIGSGGSIPIVGDFKRILGMDSLLVGFGLDDDR 434 (464)
T ss_pred ------CCeEEEEEecCCCCceECCCCCHHHHHHHHHHHHHhCCCceecCCCCcHHHHHHHHHHhCCCEEEecCCCCCCC
Confidence 124455554456899999999999999999999998876443333333 3334444 4799999999985 467
Q ss_pred CCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 267 YHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 267 ~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+|++||+|++++|.+++++|.+++..+|+
T Consensus 435 aH~~nE~i~i~~l~~~~~~~~~ll~~~~~ 463 (464)
T PRK09104 435 IHSPNEKYDLESFHKGIRSWARILAALAE 463 (464)
T ss_pred CcCCCCCcCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999998863
No 30
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.5e-34 Score=260.48 Aligned_cols=256 Identities=17% Similarity=0.161 Sum_probs=199.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccC----CCCCcCHHHHHHccc--------------------cccCCCCcEEEe--cC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENS----AITGVGVDALVKDGL--------------------LNKLKGGPLYWI--DT 55 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g----~~~~~Ga~~l~~~~~--------------------~~~~~~d~~i~~--e~ 55 (295)
+.|++.+..++++|.|+|++|||.| +. .|+++++++.. ..+.++|+++++ ||
T Consensus 105 ~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ep 182 (413)
T PRK09290 105 RTLNERGIRPRRPIEVVAFTNEEGSRFGPAM--LGSRVFTGALTPEDALALRDADGVSFAEALAAIGYDGDEAVGAARAR 182 (413)
T ss_pred HHHHHcCCCCCCCeEEEEEcCCccccccCcc--ccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcCCChhhccccccCC
Confidence 5677778788999999999999984 21 68888874321 123566777765 44
Q ss_pred CC---------------------CCceeeccceeeEEEEEEecCCCcC-CC-CCCCCHHHHHHHHHHHHHhhhccCCCCC
Q 022583 56 AD---------------------KQPCIGTGGMIPWKLHVTGKLFHSG-LP-HKAINPLELAMEALKVIQTRFYKDFPPH 112 (295)
Q Consensus 56 ~~---------------------~~~~~~~~g~~~~~v~v~G~~~Hs~-~p-~~g~nai~~~~~~i~~l~~~~~~~~~~~ 112 (295)
+. ..+++++||..+++|+++|+++|++ .| +.|.|||..+++++++|+++..+. .
T Consensus 183 t~~~~~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~-~-- 259 (413)
T PRK09290 183 RDIKAFVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH-G-- 259 (413)
T ss_pred CCccEEEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc-C--
Confidence 42 2377899999999999999999998 58 589999999999999998764221 1
Q ss_pred CcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccC
Q 022583 113 PKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLP 192 (295)
Q Consensus 113 ~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
.+.+++++.|+.++...|+||++|++.+|+|+.|+++.+++++++++.+++....
T Consensus 260 ---------~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~---------------- 314 (413)
T PRK09290 260 ---------PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAAR---------------- 314 (413)
T ss_pred ---------CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 1357899999833478999999999999999999999999999999998876432
Q ss_pred CCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCe-EEEcCCCCCcCCCC
Q 022583 193 DENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHAD 270 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~-v~~gpg~~~~~H~~ 270 (295)
.+++++++....+|++. .++++++.+.+++++. |.+. .....|+ +|+++|.. ++|+ +.|||+....+|++
T Consensus 315 ---~~~~~e~~~~~~~~~~~--~d~~lv~~l~~a~~~~-g~~~~~~~~~g~-tDa~~~~~-~iP~~~~~gp~~~~~~H~~ 386 (413)
T PRK09290 315 ---RGVEVEIELISRRPPVP--FDPGLVAALEEAAERL-GLSYRRLPSGAG-HDAQILAA-VVPTAMIFVPSVGGISHNP 386 (413)
T ss_pred ---cCCeEEEEEEecCCCcc--CCHHHHHHHHHHHHHc-CCCccccCCccc-hHHHHHhc-cCCEEEEEeccCCCCCCCc
Confidence 13556666555677754 4678999999999775 6543 3334556 58888864 7998 66888866678999
Q ss_pred CccccHHHHHHHHHHHHHHHHhhhC
Q 022583 271 NEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 271 dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
||++++++|..++++|..++.+||.
T Consensus 387 dE~v~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 387 AEFTSPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999874
No 31
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=7e-34 Score=256.87 Aligned_cols=245 Identities=13% Similarity=0.105 Sum_probs=191.5
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC--CCceeeccceeeEEEEEEecCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~--~~~~~~~~g~~~~~v~v~G~~~ 79 (295)
++|++.+..++++|.|+|++|||.|+ .|++++++++.. ++|++|++||+. ..++++++|..+++|+++|+++
T Consensus 125 ~~l~~~~~~~~~~v~~~~~~dEE~g~---~g~~~~~~~~~~---~~d~~iv~ep~~~~~~v~~~~~G~~~~~v~~~G~~a 198 (376)
T PRK07473 125 RQLARAGITTPLPITVLFTPDEEVGT---PSTRDLIEAEAA---RNKYVLVPEPGRPDNGVVTGRYAIARFNLEATGRPS 198 (376)
T ss_pred HHHHHcCCCCCCCEEEEEeCCcccCC---ccHHHHHHHhhc---cCCEEEEeCCCCCCCCEEEECeeeEEEEEEEEeEcC
Confidence 56777776778899999999999988 799999986532 468999999985 4689999999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCC
Q 022583 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (295)
Q Consensus 80 Hs~-~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~ 158 (295)
|++ .|+.|.||+..+++++.+|++.... ..+++++.|+ ||...|+||++|++.++.|.....+
T Consensus 199 Hag~~p~~g~nAi~~~~~~i~~l~~~~~~---------------~~~~~vg~i~-gg~~~n~VP~~~~~~~d~r~~~~~~ 262 (376)
T PRK07473 199 HAGATLSEGRSAIREMARQILAIDAMTTE---------------DCTFSVGIVH-GGQWVNCVATTCTGEALSMAKRQAD 262 (376)
T ss_pred CCCCCcccCcCHHHHHHHHHHHHHHhcCC---------------CceEeEeeEE-cCCCCcCCCCceEEEEEEEeCCHhH
Confidence 987 6999999999999999999886311 2578999998 8999999999999999999876433
Q ss_pred hHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCC-HHHHHHHHHHHHHhCCCC-c
Q 022583 159 VTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDS-RGFHVLCKATEEVVGHVN-P 236 (295)
Q Consensus 159 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~a~~~~~g~~~-~ 236 (295)
.++.++++.+.+. .. .+++++++....+|++..+.++ ++++.++++.+. .|.+. .
T Consensus 263 ~~~~~~~i~~~~~---~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~~~~ 319 (376)
T PRK07473 263 LDRGVARMLALSG---TE-------------------DDVTFTVTRGVTRPVWEPDAGTMALYEKARAIAGQ-LGLSLPH 319 (376)
T ss_pred HHHHHHHHHHhhC---cC-------------------CCeEEEEEccccCCCCCCChhHHHHHHHHHHHHHH-cCCCCcc
Confidence 3333333332222 00 1245555443457777666554 677777776544 56553 3
Q ss_pred eeccCCchhhHhhhhcCCCeEE-EcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 237 YSITGTLPLIRELQDEGFDVQT-AGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 237 ~~~~gg~~d~~~~~~~g~p~v~-~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
..+.|+ +|+++++..|+|++. ||||. .++|++|||+++++|.+++++|.+++.++
T Consensus 320 ~~~~g~-tDa~~~~~~giP~v~g~Gpg~-~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 320 GSAGGG-SDGNFTGAMGIPTLDGLGVRG-ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred ccCccc-cHhhhHHhcCCCEEEeccCCC-CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 344556 589999888999997 99984 67899999999999999999999999765
No 32
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=9.4e-34 Score=252.82 Aligned_cols=233 Identities=18% Similarity=0.174 Sum_probs=189.5
Q ss_pred CceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-CceeeccceeeEEEEEEecCCCcCCCCCCCC
Q 022583 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (295)
Q Consensus 11 ~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-~~~~~~~g~~~~~v~v~G~~~Hs~~p~~g~n 89 (295)
..++|.|+|++|||.|+ .|+++++++.. .+++|++||+.. .++++++|..+++++++|+++|++.+. |
T Consensus 100 ~~~~i~~~~~~dEE~g~---~G~~~~~~~~~-----~~~~ii~ept~~~~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ 168 (336)
T TIGR01902 100 KGIKVIVSGLVDEESSS---KGAREVIDKNY-----PFYVIVGEPSGAEGITLGYKGSLQLKIMCEGTPFHSSSAG---N 168 (336)
T ss_pred CCCcEEEEEEeCcccCC---ccHHHHHhhcC-----CCEEEEecCCCCcceeeeeeeEEEEEEEEEecCcccCCCh---h
Confidence 34689999999999987 79999998742 358999999874 688999999999999999999999876 4
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHH
Q 022583 90 PLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEY 169 (295)
Q Consensus 90 ai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~ 169 (295)
|+..+.+++++|.+....... + +..+++++.++ ||...|+||++|++.+|+|+.|+++++++.+++++.
T Consensus 169 ai~~~~~~~~~l~~~~~~~~~---------~-~~~~~~~~~i~-gg~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~~ 237 (336)
T TIGR01902 169 AAELLIDYSKKIIEVYKQPEN---------Y-DKPSIVPTIIR-FGESYNDTPAKLELHFDLRYPPNNKPEEAIKEITDK 237 (336)
T ss_pred HHHHHHHHHHHHHHHhccccC---------C-CCCcceeEEEE-ccCCCcCCCceEEEEEEEeeCCCCCHHHHHHHHHhc
Confidence 899999999999743222111 0 12467888898 899999999999999999999999998887777651
Q ss_pred HHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhhHhh
Q 022583 170 VDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIREL 249 (295)
Q Consensus 170 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~~~~ 249 (295)
..++++....+||+..++++++++.+++++++....+......|+ +|++++
T Consensus 238 ----------------------------~~~~~~~~~~~~p~~~~~~~~lv~~~~~a~~~~~~~~~~~~~~g~-tD~~~~ 288 (336)
T TIGR01902 238 ----------------------------FPICLEIVDETPPYKVSRNNPLVRAFVRAIRKQGMKPRLKKKTGT-SDMNIL 288 (336)
T ss_pred ----------------------------cCceEEEEeccCceecCCCCHHHHHHHHHHHHcCCCeEEeecccc-Ccccee
Confidence 012334445678888899999999999999986433233344555 589888
Q ss_pred hhc-CCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 250 QDE-GFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 250 ~~~-g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
.+. |+|++.||||....+|++||+++++++.+++++|.+++.+|+
T Consensus 289 ~~~~g~p~v~~Gpg~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~ 334 (336)
T TIGR01902 289 APIWTVPMVAYGPGDSTLDHTPQEKISLAEYLIGIKTLMLAIEELW 334 (336)
T ss_pred ccccCCCeEEECCCCcccCCCCcceeEHHHHHHHHHHHHHHHHHHh
Confidence 875 999999999976678999999999999999999999999886
No 33
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=266.62 Aligned_cols=261 Identities=19% Similarity=0.166 Sum_probs=199.7
Q ss_pred hhhhcccCCCceeEEEEEEeccc-cCCCCCcCHHHHHHccccccCCCCcEEEecCCC-----------CCceeeccceee
Q 022583 2 RKLGETKLKLKSTVIAVFIASEE-NSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-----------KQPCIGTGGMIP 69 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE-~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-----------~~~~~~~~g~~~ 69 (295)
+.|++.+..++++|.|+|++||| .|+ .|+++++++.. ..+++|++|+ |++. ..+++++||..+
T Consensus 154 ~~l~~~~~~~~~~i~~~~~~dEE~~g~---~G~~~l~~~~~-~~~~~~~~i~-e~~~~~~~~~gept~~~i~~g~kG~~~ 228 (472)
T PRK09133 154 IRLKREGFKPKRDIILALTGDEEGTPM---NGVAWLAENHR-DLIDAEFALN-EGGGGTLDEDGKPVLLTVQAGEKTYAD 228 (472)
T ss_pred HHHHhcCCCCCCCEEEEEECccccCcc---chHHHHHHHHh-hccCeEEEEE-CCCccccCCCCCceEEEeeeecceeEE
Confidence 56777777889999999999999 665 79999998653 2356788998 6543 235589999999
Q ss_pred EEEEEEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCC-C----------------------------CCCc------
Q 022583 70 WKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDF-P----------------------------PHPK------ 114 (295)
Q Consensus 70 ~~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~-~----------------------------~~~~------ 114 (295)
++|+++|+++|+|.|+ +.|||..++++|.+|++...... . +.+.
T Consensus 229 ~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (472)
T PRK09133 229 FRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALL 307 (472)
T ss_pred EEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHH
Confidence 9999999999999997 58999999999999986421100 0 0000
Q ss_pred ccccCC--CCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccC
Q 022583 115 EQVYGF--ETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLP 192 (295)
Q Consensus 115 ~~~~~~--~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
.....+ ....|++++.|+ ||...|+||++|++.+|+|+.|+++.+++.++|++.+++.
T Consensus 308 ~~~~~~~~~~~~t~~~~~i~-gG~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~~------------------- 367 (472)
T PRK09133 308 SADPSYNAMLRTTCVATMLE-GGHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVADP------------------- 367 (472)
T ss_pred hcCcchhheeeeeEEeeEEe-cCCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcCC-------------------
Confidence 000011 124688999998 8999999999999999999999999988888888776531
Q ss_pred CCCcceeEEEEeccC-CCccccCCCCHHHHHHHHHHHHHh-CCCC-ceeccCCchhhHhhhhcCCCeEE----EcCCCCC
Q 022583 193 DENIRGSLTLTFDEA-TNGVACNLDSRGFHVLCKATEEVV-GHVN-PYSITGTLPLIRELQDEGFDVQT----AGYGLMA 265 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~a~~~~~-g~~~-~~~~~gg~~d~~~~~~~g~p~v~----~gpg~~~ 265 (295)
.++++.... .++...+.+.++++.+++++++.+ |.++ +..+.|+ +|++++...|+|++. |||+...
T Consensus 368 ------~v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~~~~~gg-tDa~~~~~~gip~~~~~~i~gp~~~~ 440 (472)
T PRK09133 368 ------AIKITRIGDPSPSPASPLRPDIMKAVEKLTAAMWPGVPVIPSMSTGA-TDGRYLRAAGIPTYGVSGLFGDPDDT 440 (472)
T ss_pred ------CEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHHCCCCceeccccccc-cchHHHHhcCCCceeecCcccCcccc
Confidence 133333222 344456677899999999999887 4443 3345566 589999888999983 6777667
Q ss_pred cCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 266 TYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 266 ~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
.+|++||||+++++.+++++|.+++.+|++
T Consensus 441 ~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 441 FAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999999999874
No 34
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=8.4e-34 Score=259.91 Aligned_cols=255 Identities=19% Similarity=0.154 Sum_probs=201.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccC----CCCCcCHHHHHHcccc---------------------ccCCCCcEEEecCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENS----AITGVGVDALVKDGLL---------------------NKLKGGPLYWIDTA 56 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g----~~~~~Ga~~l~~~~~~---------------------~~~~~d~~i~~e~~ 56 (295)
+.|++.+..++++|.|++++|||.+ +. .|+++++.+... .++.+|++++.||+
T Consensus 106 ~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~--~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~ 183 (412)
T PRK12892 106 RALNEHGIATRHPLDVVAWCDEEGSRFTPGF--LGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAADRA 183 (412)
T ss_pred HHHHHcCCCCCCCeEEEEecCcccccccCcc--ccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhccccccc
Confidence 5678888889999999999999984 32 699999853210 12345667777765
Q ss_pred C---------------------CCceeeccceeeEEEEEEecCCCcCC-CC-CCCCHHHHHHHHHHHHHhhhccCCCCCC
Q 022583 57 D---------------------KQPCIGTGGMIPWKLHVTGKLFHSGL-PH-KAINPLELAMEALKVIQTRFYKDFPPHP 113 (295)
Q Consensus 57 ~---------------------~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~-~g~nai~~~~~~i~~l~~~~~~~~~~~~ 113 (295)
. ..++++++|..+++|+++|+++|++. |+ .|.||+..+++++++|++......
T Consensus 184 ~~~~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~~---- 259 (412)
T PRK12892 184 RPKGYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRVC---- 259 (412)
T ss_pred CccEEEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcC----
Confidence 2 23778999999999999999999975 64 689999999999999988532221
Q ss_pred cccccCCCCCccccceeeecCC-CCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccC
Q 022583 114 KEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLP 192 (295)
Q Consensus 114 ~~~~~~~~~~~t~~~~~i~~gg-~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
.+.+++++.|+ +| ...|+||++|++.+|+|+.|+++.+++.+++++.+++....
T Consensus 260 --------~~~~~~vg~i~-gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~---------------- 314 (412)
T PRK12892 260 --------GPAVVTVGRVA-LDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARR---------------- 314 (412)
T ss_pred --------CCcEEEEEEEE-ecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 14689999998 65 79999999999999999999999999999999988876432
Q ss_pred CCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCe-EEEcCCCCCcCCCC
Q 022583 193 DENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHAD 270 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~-v~~gpg~~~~~H~~ 270 (295)
++++++++....+|++. .++++++.+.+++++ .|.++ .....|+ +|+++|++. +|+ +.||||....+|++
T Consensus 315 ---~~~~~e~~~~~~~~~~~--~d~~lv~~~~~a~~~-~g~~~~~~~~~g~-tDa~~~~~~-ip~~~~~gp~~~~~~H~~ 386 (412)
T PRK12892 315 ---RGCRVSVDRIAEYAPAP--CDAALVDALRAAAEA-AGGPYLEMPSGAG-HDAQNMARI-APSAMLFVPSKGGISHNP 386 (412)
T ss_pred ---hCCeEEEEEEecCCCcC--CCHHHHHHHHHHHHH-cCCCccccCcchH-HHHHHHHhH-CCEEEEEeccCCCCCCCC
Confidence 13556666555677764 457899999999988 67553 3344555 588888876 785 66899866679999
Q ss_pred CccccHHHHHHHHHHHHHHHHhhhC
Q 022583 271 NEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 271 dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
||++++++|.+++++|..++.+|+.
T Consensus 387 ~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 387 AEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998863
No 35
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=258.88 Aligned_cols=258 Identities=18% Similarity=0.204 Sum_probs=192.8
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----------CceeeccceeeE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----------QPCIGTGGMIPW 70 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----------~~~~~~~g~~~~ 70 (295)
+.|++.+..++++|.|+|++|||.|+. .|+++|+++.. ..++...+++.|++.. .++++++|..++
T Consensus 118 ~~l~~~~~~~~~~i~~~~~~dEE~g~~--~g~~~l~~~~~-~~~~~~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~ 194 (426)
T PRK07906 118 RHLARTGRRPPRDLVFAFVADEEAGGT--YGAHWLVDNHP-ELFEGVTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWM 194 (426)
T ss_pred HHHHHcCCCCCccEEEEEecCcccchh--hhHHHHHHHHH-HhccchheEEECCCceeeccCCCccEEEEEeccceEEEE
Confidence 567777888899999999999999863 59999987642 1112123456666532 367899999999
Q ss_pred EEEEEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccC--------------------CCCCCc----------ccccCC
Q 022583 71 KLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKD--------------------FPPHPK----------EQVYGF 120 (295)
Q Consensus 71 ~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~--------------------~~~~~~----------~~~~~~ 120 (295)
+|+++|+++|++.|+. .|||..++++|.+|++..... +.+... .....+
T Consensus 195 ~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 273 (426)
T PRK07906 195 RLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGA 273 (426)
T ss_pred EEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhh
Confidence 9999999999999875 999999999999997642110 000000 000000
Q ss_pred CCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeE
Q 022583 121 ETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSL 200 (295)
Q Consensus 121 ~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (295)
...+|++++.|+ ||...|+||++|++.+|+|+.|+++ +++.+.+++.+. ..+
T Consensus 274 ~~~~t~~~~~i~-gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~~~~~--------------------------~~v 325 (426)
T PRK07906 274 TLRNTANPTMLK-AGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVDELLG--------------------------PDV 325 (426)
T ss_pred hhcccccceeEe-ccCccccCCCceEEEEEEeECCCCc-HHHHHHHHHHhC--------------------------CCe
Confidence 113689999998 8999999999999999999999875 444444433321 124
Q ss_pred EEEeccCCCccccCCCCHHHHHHHHHHHHHhCC--CCceeccCCchhhHhhhhcCCCeEEEcCCC-------CCcCCCCC
Q 022583 201 TLTFDEATNGVACNLDSRGFHVLCKATEEVVGH--VNPYSITGTLPLIRELQDEGFDVQTAGYGL-------MATYHADN 271 (295)
Q Consensus 201 ~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~--~~~~~~~gg~~d~~~~~~~g~p~v~~gpg~-------~~~~H~~d 271 (295)
++++...+|++.++.++++++.+.+++++.++. ..++...|+ +|++++...|+|++.|||+. ..++|++|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~~~~~~~gg-tDa~~~~~~g~p~~~~gp~~~~~~~~~~~~~H~~~ 404 (426)
T PRK07906 326 EREWVHRDPALETPFDGPLVDAMNAALLAEDPGARVVPYMLSGG-TDAKAFSRLGIRCYGFAPLRLPPDLDFAALFHGVD 404 (426)
T ss_pred EEEEecCCCCCCCCCCcHHHHHHHHHHHHHCCCCeEeeeeeccc-CcHHHHHhcCCceEEEeccccCccccccccCcCCC
Confidence 455555688888899999999999999988642 234445566 48999998999999999974 15799999
Q ss_pred ccccHHHHHHHHHHHHHHHHh
Q 022583 272 EYCLLSDMCQGYQVFVSIISQ 292 (295)
Q Consensus 272 E~v~~~~l~~~~~~~~~~l~~ 292 (295)
|++++++|.+++++|.+++.+
T Consensus 405 E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 405 ERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred CceeHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 36
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.3e-33 Score=258.58 Aligned_cols=255 Identities=15% Similarity=0.111 Sum_probs=194.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccC-----CCCCcCHHHHHHccccc--------------------cCCCC--------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENS-----AITGVGVDALVKDGLLN--------------------KLKGG-------- 48 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g-----~~~~~Ga~~l~~~~~~~--------------------~~~~d-------- 48 (295)
+.|++.+..++++|.|+|++|||.| + .|++++..+...+ ...++
T Consensus 108 ~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (412)
T PRK12893 108 RTLNDAGIRTRRPIEVVSWTNEEGARFAPAM---LGSGVFTGALPLDDALARRDADGITLGEALARIGYRGTARVGRRAV 184 (412)
T ss_pred HHHHHcCCCCCCCeEEEEEcccccccccccc---ccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccccccCCc
Confidence 5677778788999999999999986 4 6888887543210 01111
Q ss_pred -cEEEec----------CCCCCceeeccceeeEEEEEEecCCCcCC-CC-CCCCHHHHHHHHHHHHHhhhccCCCCCCcc
Q 022583 49 -PLYWID----------TADKQPCIGTGGMIPWKLHVTGKLFHSGL-PH-KAINPLELAMEALKVIQTRFYKDFPPHPKE 115 (295)
Q Consensus 49 -~~i~~e----------~~~~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~~ 115 (295)
..+-.| +....++++++|..+++|+++|+++|++. |+ .|.|||..+++++.+|+++..+ ..
T Consensus 185 ~~~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~-~~----- 258 (412)
T PRK12893 185 DAYLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAAA-LA----- 258 (412)
T ss_pred cEEEEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHHh-cC-----
Confidence 122121 11234778999999999999999999985 84 7999999999999999886422 21
Q ss_pred cccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCC
Q 022583 116 QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDEN 195 (295)
Q Consensus 116 ~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (295)
...+++++.|+.++...|+||++|++.+|+|+.|+++.+++.+++++.+++....
T Consensus 259 ------~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~------------------- 313 (412)
T PRK12893 259 ------PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAA------------------- 313 (412)
T ss_pred ------CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 1368899999833579999999999999999999999999999999988876432
Q ss_pred cceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccc
Q 022583 196 IRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYC 274 (295)
Q Consensus 196 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v 274 (295)
++++++++....+||+.. +.++++.+++++++. |.+. .....|+ +|+++|+..+.+++.|||+....+|++||++
T Consensus 314 ~~~~v~~~~~~~~~~~~~--d~~l~~~l~~~~~~~-g~~~~~~~~~g~-tD~~~~~~~~p~~v~~gp~~~~~~Hs~dE~v 389 (412)
T PRK12893 314 RGVQVTVETVWDFPPVPF--DPALVALVEAAAEAL-GLSHMRMVSGAG-HDAMFLARVAPAAMIFVPCRGGISHNEAEDT 389 (412)
T ss_pred cCCeEEEEEEecCCCcCC--CHHHHHHHHHHHHHc-CCCccccCCccH-HHHHHHHhhCCEEEEEeecCCCCCCCccccC
Confidence 135566655455777544 577999999988764 6543 3334555 5888888765447899998666789999999
Q ss_pred cHHHHHHHHHHHHHHHHhhh
Q 022583 275 LLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 275 ~~~~l~~~~~~~~~~l~~~~ 294 (295)
++++|..++++|..++.+|+
T Consensus 390 ~i~~l~~~~~i~~~ll~~~~ 409 (412)
T PRK12893 390 EPADLAAGANVLLHAVLELA 409 (412)
T ss_pred CHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999886
No 37
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=2.6e-33 Score=255.50 Aligned_cols=255 Identities=16% Similarity=0.101 Sum_probs=197.6
Q ss_pred ChhhhcccCCCceeEEEEEEecccc-----CCCCCcCHHHHHHcccc-------c--c---------CCCCcEEEecCCC
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGLL-------N--K---------LKGGPLYWIDTAD 57 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~-----g~~~~~Ga~~l~~~~~~-------~--~---------~~~d~~i~~e~~~ 57 (295)
++.|++.+.+++++|.|++++|||. ++ .|+++++..... + + ..++++++.++++
T Consensus 98 ~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~---~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 174 (401)
T TIGR01879 98 VDALKEAYVVPLHPIEVVAFTEEEGSRFPYGM---WGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPNQPLRPR 174 (401)
T ss_pred HHHHHHcCCCCCCCeEEEEEeCCcCcCccccc---ccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccccccccc
Confidence 3578888989999999999999997 44 789888753210 0 0 1233444333332
Q ss_pred -----------------------CCceeeccceeeEEEEEEecCCCcCC-CC-CCCCHHHHHHHHHHHHHhhhccCCCCC
Q 022583 58 -----------------------KQPCIGTGGMIPWKLHVTGKLFHSGL-PH-KAINPLELAMEALKVIQTRFYKDFPPH 112 (295)
Q Consensus 58 -----------------------~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~-~g~nai~~~~~~i~~l~~~~~~~~~~~ 112 (295)
..++++++|..|++|+++|+++|++. |. .+.||+..+++++.+|+++..+. .
T Consensus 175 ~~~~~~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~-~-- 251 (401)
T TIGR01879 175 GDIKAYVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM-G-- 251 (401)
T ss_pred ccccEEEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc-C--
Confidence 24678999999999999999999986 53 67999999999999999864322 1
Q ss_pred CcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccC
Q 022583 113 PKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLP 192 (295)
Q Consensus 113 ~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
.+.+.+++.|+.++...|+||++|++.+|+|+.|+++.+++.+++++.+++....
T Consensus 252 ---------~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~---------------- 306 (401)
T TIGR01879 252 ---------DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDE---------------- 306 (401)
T ss_pred ---------CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 1356789999833477999999999999999999999999999999998875432
Q ss_pred CCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCC
Q 022583 193 DENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADN 271 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~d 271 (295)
.+++++++....+|++ +.++++++.+.+++++. |.+. ...+.++ +|+++|...++|++.||||....+|++|
T Consensus 307 ---~~~~~~~~~~~~~~~~--~~d~~lv~~l~~a~~~~-g~~~~~~~~~gg-tDa~~~~~~~~~~v~fgPg~~~~aH~~d 379 (401)
T TIGR01879 307 ---RDIGIDIERWMDEEPV--PCSEELVAALTELCERL-GYNARVMVSGAG-HDAQILAPIVPIGMIFIPSINGISHNPA 379 (401)
T ss_pred ---cCceEEEEEeecCCCc--CCCHHHHHHHHHHHHHc-CCCccccccchH-HHHHHHHhhCCEEEEEecCCCCCcCCCC
Confidence 1355666655567775 45789999999999875 6443 3334555 5999998888999999999767899999
Q ss_pred ccccHHHHHHHHHHHHHHHHhh
Q 022583 272 EYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 272 E~v~~~~l~~~~~~~~~~l~~~ 293 (295)
|++++++|.+++++|.+++.++
T Consensus 380 E~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 380 EWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999998764
No 38
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=255.54 Aligned_cols=263 Identities=15% Similarity=0.134 Sum_probs=200.6
Q ss_pred cCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC-----CceeeccceeeEEEEEE--ecCCC
Q 022583 8 KLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK-----QPCIGTGGMIPWKLHVT--GKLFH 80 (295)
Q Consensus 8 ~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~-----~~~~~~~g~~~~~v~v~--G~~~H 80 (295)
+..++++|.|++++|||.|+ .|+++++++.. +.+++|++|+.||+.. .+++++||..+++|+++ |+++|
T Consensus 140 ~~~~~~~i~~~~~~dEE~g~---~g~~~~l~~~~-~~~~~d~~iv~E~~~~~~~~p~i~~~~kG~~~~~l~v~~~G~~~H 215 (449)
T PRK07907 140 GGDLPVGVTVFVEGEEEMGS---PSLERLLAEHP-DLLAADVIVIADSGNWSVGVPALTTSLRGNADVVVTVRTLEHAVH 215 (449)
T ss_pred ccCCCCcEEEEEEcCcccCC---ccHHHHHHhch-HhhcCCEEEEecCCcCCCCCeEEEEecCCcEEEEEEEEECCCCCC
Confidence 34567899999999999998 79999998642 2246789999999764 36789999999999998 88999
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHhhhccC----CCCCCcc--c-------------------------ccCCCCCccccc
Q 022583 81 SGL-PHKAINPLELAMEALKVIQTRFYKD----FPPHPKE--Q-------------------------VYGFETPSTMKP 128 (295)
Q Consensus 81 s~~-p~~g~nai~~~~~~i~~l~~~~~~~----~~~~~~~--~-------------------------~~~~~~~~t~~~ 128 (295)
||. +..+.||+..++++|.+|.+...+. +...... . ........|+++
T Consensus 216 ss~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i 295 (449)
T PRK07907 216 SGQFGGAAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITV 295 (449)
T ss_pred CccccccCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEE
Confidence 997 4678999999999999998642110 0000000 0 000012357888
Q ss_pred eeeec--CCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc
Q 022583 129 TQWSY--PGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE 206 (295)
Q Consensus 129 ~~i~~--gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (295)
+.|+. +|...|+||++|++.+|+|+.|+++.+++.+.|++.+++... ++.+++++...
T Consensus 296 ~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~~~--------------------~~~~~~~~~~~ 355 (449)
T PRK07907 296 IGIDAPPVAGASNALPPSARARLSLRVAPGQDAAEAQDALVAHLEAHAP--------------------WGAHVTVERGD 355 (449)
T ss_pred EeeecCCCCCCCCEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC--------------------CCcEEEEEECC
Confidence 88873 146789999999999999999999999999999999876311 12456666556
Q ss_pred CCCccccCCCCHHHHHHHHHHHHHhCCCCcee-ccCCchhhHhhhh-c-CCCeEEEcCCCC-CcCCCCCccccHHHHHHH
Q 022583 207 ATNGVACNLDSRGFHVLCKATEEVVGHVNPYS-ITGTLPLIRELQD-E-GFDVQTAGYGLM-ATYHADNEYCLLSDMCQG 282 (295)
Q Consensus 207 ~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~-~~gg~~d~~~~~~-~-g~p~v~~gpg~~-~~~H~~dE~v~~~~l~~~ 282 (295)
.++|+.++.++++++.+++++++.+|.++... ..|+.+....|.. . ++|++.||||.. .++|++||+|++++|.++
T Consensus 356 ~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~Gpg~~~~~aH~~nE~i~i~~l~~~ 435 (449)
T PRK07907 356 AGQPFAADASGPAYDAARAAMREAWGKDPVDMGMGGSIPFIAELQEAFPQAEILVTGVEDPKTRAHSPNESVHLGELERA 435 (449)
T ss_pred CcCceeCCCCCHHHHHHHHHHHHHhCCCceecCCCCcHHHHHHHHHhcCCCcEEEeccCCCCCCCcCCCCCcCHHHHHHH
Confidence 68899999999999999999999998765433 3333222233332 3 589999999973 689999999999999999
Q ss_pred HHHHHHHHHhhh
Q 022583 283 YQVFVSIISQLE 294 (295)
Q Consensus 283 ~~~~~~~l~~~~ 294 (295)
+++|+++|.+|.
T Consensus 436 ~~~~~~~l~~~~ 447 (449)
T PRK07907 436 AVAEALLLARLA 447 (449)
T ss_pred HHHHHHHHHHHh
Confidence 999999999884
No 39
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.7e-33 Score=254.96 Aligned_cols=259 Identities=15% Similarity=0.077 Sum_probs=196.8
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCC--CCcCHHHHHHccc--------------------cccCCCCcEEE--ecCC-
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVKDGL--------------------LNKLKGGPLYW--IDTA- 56 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~--~~~Ga~~l~~~~~--------------------~~~~~~d~~i~--~e~~- 56 (295)
+.|++.+..++++|.|++++|||.|+. ...|++++.+... ..+..+|++++ ++|+
T Consensus 106 ~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ep~~ 185 (414)
T PRK12890 106 AALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGGDPDALPGALRPPGA 185 (414)
T ss_pred HHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCC
Confidence 567777778899999999999997430 0157776654321 01223344332 4442
Q ss_pred --------------------CCCceeeccceeeEEEEEEecCCCcCC-CC-CCCCHHHHHHHHHHHHHhhhccCCCCCCc
Q 022583 57 --------------------DKQPCIGTGGMIPWKLHVTGKLFHSGL-PH-KAINPLELAMEALKVIQTRFYKDFPPHPK 114 (295)
Q Consensus 57 --------------------~~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~-~g~nai~~~~~~i~~l~~~~~~~~~~~~~ 114 (295)
...++++++|..+++|+++|+++|++. |+ .+.|||..+++++.+|++...+ ..
T Consensus 186 ~~~~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~-~~---- 260 (414)
T PRK12890 186 VAAFLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARA-LL---- 260 (414)
T ss_pred ccEEEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHh-cC----
Confidence 235778999999999999999999985 85 4589999999999999986422 11
Q ss_pred ccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCC
Q 022583 115 EQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDE 194 (295)
Q Consensus 115 ~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 194 (295)
.+.+++++.|+.|+...|+||++|++.+|+|+.|+++.++++++|++.+++....
T Consensus 261 -------~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~------------------ 315 (414)
T PRK12890 261 -------HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAA------------------ 315 (414)
T ss_pred -------CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 1467899999833579999999999999999999999999999999998876432
Q ss_pred CcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCc-eeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCcc
Q 022583 195 NIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEY 273 (295)
Q Consensus 195 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~-~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~ 273 (295)
.+.+++++....+|++. .+.++++.+.+++++. |.+.. ..+.|+ +|+++|.+.+.+++.|||+....+|++||+
T Consensus 316 -~~~~~~~~~~~~~~~~~--~~~~l~~~l~~~~~~~-g~~~~~~~~~g~-tDa~~~~~~gp~~~~~gp~~~~~aHs~dE~ 390 (414)
T PRK12890 316 -RGVRIELERLSRSEPVP--CDPALVDAVEAAAARL-GYPSRRMPSGAG-HDAAAIARIGPSAMIFVPCRGGISHNPEEA 390 (414)
T ss_pred -hCCeEEEEEeecCCCcC--CCHHHHHHHHHHHHHc-CCCceecCCccc-HHHHHHHhhCCEEEEEecCCCCCCCCcCcc
Confidence 13456665555677754 4578999999999774 65433 334556 589999887866667899866679999999
Q ss_pred ccHHHHHHHHHHHHHHHHhhhC
Q 022583 274 CLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 274 v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+++++|..++++|..++.+|++
T Consensus 391 v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 391 MDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred CCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998863
No 40
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=8.1e-33 Score=255.27 Aligned_cols=253 Identities=18% Similarity=0.211 Sum_probs=195.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCC--------ceeeccceeeEEEE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ--------PCIGTGGMIPWKLH 73 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~--------~~~~~~g~~~~~v~ 73 (295)
++|++.+.+++++|.|+|++|||.| .|+++|++++.+++ +|+++..|+.+.. .....+|..+++|+
T Consensus 199 ~~L~~~~~~~~g~V~~if~pdEE~g----~Ga~~li~~g~~~~--~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~ 272 (478)
T PLN02280 199 KILKSREHLLKGTVVLLFQPAEEAG----NGAKRMIGDGALDD--VEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAV 272 (478)
T ss_pred HHHHhccccCCceEEEEeccccccc----chHHHHHHCCCCcC--CCEEEEEecCCCCCCceeEecccccccceeEEEEE
Confidence 4567677778999999999999996 59999999987764 4677777654321 12344599999999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEe
Q 022583 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (295)
Q Consensus 74 v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~ 153 (295)
++|+++|++.|+.|+||+..+++++..++++..+...+. .+.+++++.|+ ||...|+||++|++.+++|+
T Consensus 273 v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~---------~~~tvnvg~I~-GG~~~NvIPd~~~l~~diR~ 342 (478)
T PLN02280 273 ISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPL---------DSQVVSVTTMD-GGNNLDMIPDTVVLGGTFRA 342 (478)
T ss_pred EECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCC---------CCcEEEEEEEE-ccCCCCEeCCEEEEEEEEec
Confidence 999999999999999999999999999988643322221 24688999998 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEec----cCCCccccCCCCHHHHHHHHHHHH
Q 022583 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFD----EATNGVACNLDSRGFHVLCKATEE 229 (295)
Q Consensus 154 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~a~~~ 229 (295)
.|+++.+++.++|++.++..... .++++++++. ..+||..+ +.++++.++++..+
T Consensus 343 ~~~e~~e~l~~~I~~~~~~~a~~-------------------~g~~~~v~~~~~~~~~~pp~~n--~~~l~~~~~~~a~~ 401 (478)
T PLN02280 343 FSNTSFYQLLKRIQEVIVEQAGV-------------------FRCSATVDFFEKQNTIYPPTVN--NDAMYEHVRKVAID 401 (478)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEeccccCCCCCccC--CHHHHHHHHHHHHH
Confidence 99888888888888887764332 1355555542 23677544 45789999998877
Q ss_pred HhCCC-C-ce-eccCCchhhHhhhhcCCCeEEEcCC-------CCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 230 VVGHV-N-PY-SITGTLPLIRELQDEGFDVQTAGYG-------LMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 230 ~~g~~-~-~~-~~~gg~~d~~~~~~~g~p~v~~gpg-------~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
..|.+ . .. ...|+ +|..+|.+ .+|++.||+| ....+|+++|++++++|..++++|..++.++
T Consensus 402 ~~G~~~~~~~~~~~g~-tD~~~~~~-~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~ 473 (478)
T PLN02280 402 LLGPANFTVVPPMMGA-EDFSFYSQ-VVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERY 473 (478)
T ss_pred hcCccccccCCCCeee-chHHHHHh-hCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 77754 1 11 23455 47777876 4999988433 2337899999999999999999999998765
No 41
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1e-32 Score=256.31 Aligned_cols=267 Identities=16% Similarity=0.124 Sum_probs=201.1
Q ss_pred hhhhc-ccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC-----CCceeeccceeeEEEEEE
Q 022583 2 RKLGE-TKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-----KQPCIGTGGMIPWKLHVT 75 (295)
Q Consensus 2 ~~L~~-~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-----~~~~~~~~g~~~~~v~v~ 75 (295)
+.|++ .+..+.++|.|+|++|||.|+ .|+++++++.. ..+++|++|+.||+. ..+++++||.++++|+++
T Consensus 140 ~~l~~~~~~~~~~~i~~~~~~dEE~g~---~G~~~l~~~~~-~~~~~d~~iv~e~~~~~~~~~~i~~g~kG~~~~~v~v~ 215 (469)
T PRK07079 140 EQVLAARGGRLGFNVKLLIEMGEEIGS---PGLAEVCRQHR-EALAADVLIASDGPRLSAERPTLFLGSRGAVNFRLRVN 215 (469)
T ss_pred HHHHHhcCCCCCCCEEEEEECccccCC---ccHHHHHHHhH-HhcCCCEEEEeCCCccCCCCeEEEEecceEEEEEEEEe
Confidence 34443 346788999999999999998 79999998753 224579999999764 247899999999999999
Q ss_pred ec--CCCcCCC-CCCCCHHHHHHHHHHHHHhhhccC--------------------CCCCCccccc--------------
Q 022583 76 GK--LFHSGLP-HKAINPLELAMEALKVIQTRFYKD--------------------FPPHPKEQVY-------------- 118 (295)
Q Consensus 76 G~--~~Hs~~p-~~g~nai~~~~~~i~~l~~~~~~~--------------------~~~~~~~~~~-------------- 118 (295)
|+ +.||+.. ..+.||+..++++|.++.+....- +.........
T Consensus 216 G~~~~~hs~~~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (469)
T PRK07079 216 LRDGAHHSGNWGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPA 295 (469)
T ss_pred eCCCCCCCCccccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHH
Confidence 98 4566642 234799999999999986531100 0000000000
Q ss_pred -CCCCCccccceeeecCCC---CcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCC
Q 022583 119 -GFETPSTMKPTQWSYPGG---GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDE 194 (295)
Q Consensus 119 -~~~~~~t~~~~~i~~gg~---~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 194 (295)
......|+|++.|+ ||. ..|+||++|++.+|+|+.|+++.+++.++|++.+++...
T Consensus 296 ~~~~~~~t~nv~~i~-gG~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~------------------- 355 (469)
T PRK07079 296 ERVFGWNTLEVLAFK-TGNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGF------------------- 355 (469)
T ss_pred HHHhhCCceEEEeee-cCCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCC-------------------
Confidence 01123578999998 663 589999999999999999999999999999999886310
Q ss_pred CcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCce-eccCCchhhHhhhh-cCCCeEEEcCCC-CCcCCCCC
Q 022583 195 NIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPY-SITGTLPLIRELQD-EGFDVQTAGYGL-MATYHADN 271 (295)
Q Consensus 195 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~-~~~gg~~d~~~~~~-~g~p~v~~gpg~-~~~~H~~d 271 (295)
.++++++...++|+..++++|+++.+.+++++++|.++.. ...++++|+++|.. .|+|++.||++. ...+|++|
T Consensus 356 ---~~v~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~~g~~d~~~~~~~~giP~v~~g~~~~~~~~H~~d 432 (469)
T PRK07079 356 ---PMVEVTVERGSPATRLDPDDPWVRWALASIARTTGKKPALLPNLGGSLPNDVFADILGLPTLWVPHSYPACSQHAPN 432 (469)
T ss_pred ---CCeEEEEeCCCCceecCCCCHHHHHHHHHHHHHhCCCCceecCCCcchhHHHHHHHhCCCEEEecCCCCCccCcCCC
Confidence 1345566667888889999999999999999998876433 33344456777764 799999886653 34579999
Q ss_pred ccccHHHHHHHHHHHHHHHHhhhC
Q 022583 272 EYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 272 E~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
|||++++|.+++++|.+++.+|++
T Consensus 433 E~v~l~~l~~~~~~~~~~~~~~~~ 456 (469)
T PRK07079 433 EHLLASVAREGLQIMAGLFWDLGE 456 (469)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999874
No 42
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.6e-33 Score=254.23 Aligned_cols=253 Identities=14% Similarity=0.081 Sum_probs=195.4
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCC--CcCHHHH------------------------HHccccccCCCCcEEEec
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAIT--GVGVDAL------------------------VKDGLLNKLKGGPLYWID 54 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~--~~Ga~~l------------------------~~~~~~~~~~~d~~i~~e 54 (295)
++.|++.+..++++|.|++++|||.+... ..|++.+ .+.++ ..|++++.+
T Consensus 107 ~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~ 182 (414)
T PRK12891 107 VRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGY----AGAEPVGGY 182 (414)
T ss_pred HHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCC----CcccccccC
Confidence 36788899999999999999999986310 0366544 33332 234444444
Q ss_pred CC-------------------CCCceeeccceeeEEEEEEecCCCcC-CCC-CCCCHHHHHHHHHHHHHhhhccCCCCCC
Q 022583 55 TA-------------------DKQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHP 113 (295)
Q Consensus 55 ~~-------------------~~~~~~~~~g~~~~~v~v~G~~~Hs~-~p~-~g~nai~~~~~~i~~l~~~~~~~~~~~~ 113 (295)
|+ ...++++++|..+++|+++|+++|++ .|+ .|.|||..+++++..|+++.... .
T Consensus 183 ~~~~~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~-~--- 258 (414)
T PRK12891 183 PVHAAYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD-A--- 258 (414)
T ss_pred CCCEEEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc-C---
Confidence 32 12477899999999999999999998 576 58999999999999998864321 1
Q ss_pred cccccCCCCCccccceeeecCC-CCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccC
Q 022583 114 KEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLP 192 (295)
Q Consensus 114 ~~~~~~~~~~~t~~~~~i~~gg-~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 192 (295)
.+.+++++.|+ || ...|+||++|++.+|+|+.|+++.++++++|++.+++....
T Consensus 259 --------~~~t~~vg~I~-gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~---------------- 313 (414)
T PRK12891 259 --------PDARATVGMID-ARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADE---------------- 313 (414)
T ss_pred --------CCeEEEEEEEE-eeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 14689999999 75 68999999999999999999999999999999888876432
Q ss_pred CCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCe-EEEcCCCCCcCCCC
Q 022583 193 DENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHAD 270 (295)
Q Consensus 193 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~-v~~gpg~~~~~H~~ 270 (295)
++++++++....+||+.+ +.++++.+++++++ .|.+. ...+.|++ |+.++. .|+|+ +.|||+....+|++
T Consensus 314 ---~~~~~~~~~~~~~~~~~~--d~~lv~~l~~a~~~-~G~~~~~~~~~ggt-Da~~~~-~giPt~~~~gp~~~~~aH~~ 385 (414)
T PRK12891 314 ---TGLRADIEQIFGYAPAPF--APGCIDAVRDAARA-LGLSHMDIVSGAGH-DACFAA-RGAPTGMIFVPCVDGLSHNE 385 (414)
T ss_pred ---hCCEEEEEEEecCCCcCC--CHHHHHHHHHHHHH-cCCCceecCCcchH-HHHHHH-hhCCEEEEEEcCCCCCCCCc
Confidence 135666666566777643 56899999999865 46543 33455664 777764 48998 67899976678999
Q ss_pred CccccHHHHHHHHHHHHHHHHhhh
Q 022583 271 NEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 271 dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
||++++++|..++++|..++.+|+
T Consensus 386 dE~v~i~~l~~~~~il~~~l~~~~ 409 (414)
T PRK12891 386 AEAITPEWFAAGADVLLRAVLQSA 409 (414)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999886
No 43
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=4e-33 Score=260.27 Aligned_cols=264 Identities=17% Similarity=0.173 Sum_probs=197.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEE------EecCCC------CCceeeccceee
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY------WIDTAD------KQPCIGTGGMIP 69 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i------~~e~~~------~~~~~~~~g~~~ 69 (295)
+.|++.+..++++|.|+|++|||.|+ .|++++++.....+.++|+++ ..++.. ..+.++++|..+
T Consensus 167 ~~l~~~~~~l~~~I~llf~~dEE~g~---~G~~~l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i~~~~kG~~~ 243 (486)
T PRK08262 167 EALLAQGFQPRRTIYLAFGHDEEVGG---LGARAIAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVALIGVAEKGYAT 243 (486)
T ss_pred HHHHHcCCCCCCeEEEEEecccccCC---cCHHHHHHHHHHhcCCEEEEEeCCceecccccCCCCceEEeeEEeeeeeEE
Confidence 56777777889999999999999988 699999875322233445443 222111 235678999999
Q ss_pred EEEEEEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccC-CC-----------CCCc-----------------------
Q 022583 70 WKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKD-FP-----------PHPK----------------------- 114 (295)
Q Consensus 70 ~~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~-~~-----------~~~~----------------------- 114 (295)
++|+++|+++||+.|+. .||+..++++|.+|++..... +. +...
T Consensus 244 ~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (486)
T PRK08262 244 LELTARATGGHSSMPPR-QTAIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAK 322 (486)
T ss_pred EEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhc
Confidence 99999999999999998 999999999999998741100 00 0000
Q ss_pred ccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCC
Q 022583 115 EQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDE 194 (295)
Q Consensus 115 ~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 194 (295)
.........+|++++.|+ ||...|+||++|++.+|+|+.|+++.+++.+++++.+++.
T Consensus 323 ~~~~~~~~~~t~~i~~I~-gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~--------------------- 380 (486)
T PRK08262 323 SPETAAMLRTTTAPTMLK-GSPKDNVLPQRATATVNFRILPGDSVESVLAHVRRAVADD--------------------- 380 (486)
T ss_pred CCccceeEEeeeeeeEEe-cCCccccCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccC---------------------
Confidence 000001224789999998 8999999999999999999999999999988888777642
Q ss_pred CcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCC-CC-ceeccCCchhhHhhhhcC-----CCeEEEcCCCCCcC
Q 022583 195 NIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH-VN-PYSITGTLPLIRELQDEG-----FDVQTAGYGLMATY 267 (295)
Q Consensus 195 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~-~~-~~~~~gg~~d~~~~~~~g-----~p~v~~gpg~~~~~ 267 (295)
+.++++.....+|++..+.++++++.+++++++.+|. .. +..+.|+ +|+++++... ++++.+|||....+
T Consensus 381 --~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~~~~~~~g~-tDa~~~~~~~p~~~~~~~~~~gpg~~~~~ 457 (486)
T PRK08262 381 --RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVVAPYLVVGA-TDSRHYSGISDNVYRFSPLRLSPEDLARF 457 (486)
T ss_pred --ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCccccceeccc-ccHHHHHHhcCCeEEECCccCCcccccCC
Confidence 1344444333467777888899999999999999874 22 2334456 5888887642 45566788766789
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 268 HADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 268 H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
|++||++++++|.+++++|.+++.++|
T Consensus 458 Ht~dE~i~i~~l~~~~~i~~~~l~~~~ 484 (486)
T PRK08262 458 HGTNERISVANYARMIRFYYRLIENAA 484 (486)
T ss_pred CCCCCceeHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999886
No 44
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-32 Score=250.12 Aligned_cols=261 Identities=23% Similarity=0.261 Sum_probs=201.6
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHcccc-ccCCCCcEEEecCC-----CCCceeeccceeeEEEEEE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL-NKLKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~-~~~~~d~~i~~e~~-----~~~~~~~~~g~~~~~v~v~ 75 (295)
+.|.+.+..++++|.++|++|||+|+ .|+..++.++.. ..+++|++|+.|++ ...+.++++|..+++|+++
T Consensus 129 ~~l~~~~~~~~~~v~~~~~~dEE~g~---~~~~~~~~~~~~~~~~~~d~~i~~E~~~~~~~~~~~~~~~kG~~~~~v~v~ 205 (409)
T COG0624 129 SALKAAGGELPGDVRLLFTADEESGG---AGGKAYLEEGEEALGIRPDYEIVGEPTLESEGGDIIVVGHKGSLWLEVTVK 205 (409)
T ss_pred HHHHHhCCCCCeEEEEEEEeccccCC---cchHHHHHhcchhhccCCCEEEeCCCCCcccCCCeEEEcceeEEEEEEEEE
Confidence 45666667889999999999999998 677777776532 23568999999983 3346679999999999999
Q ss_pred ecCCCcCC--CCCCCCHH----HHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeec-------CCCCcceeC
Q 022583 76 GKLFHSGL--PHKAINPL----ELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSY-------PGGGINQIP 142 (295)
Q Consensus 76 G~~~Hs~~--p~~g~nai----~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~-------gg~~~n~iP 142 (295)
|+++|+|. |+.+.|++ ..+.+++..+.+.....+. .+.+++++.+.. ++...|+||
T Consensus 206 G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~nviP 274 (409)
T COG0624 206 GKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFD-----------GPLGLNVGLILAGPGASVNGGDKVNVIP 274 (409)
T ss_pred eecccccccCCcccccHHHHHHHHHHHHHHHhccccccccc-----------CCccccccccccCCcccccCCccCceec
Confidence 99999998 99999955 4444444444433211111 035556665541 233469999
Q ss_pred CeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHH
Q 022583 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHV 222 (295)
Q Consensus 143 ~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 222 (295)
++|++.+|+|+.|+++++++.+++++.++..... .+.+++++.....+++..+.++++++.
T Consensus 275 ~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~ 335 (409)
T COG0624 275 GEAEATVDIRLLPGEDLDDVLEELEAELRAIAPK-------------------EGVEYEIEPGLGEPPLPVPGDSPLVAA 335 (409)
T ss_pred ceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccc-------------------cCceEEeccccCCccccCCCchHHHHH
Confidence 9999999999999999999999999999875321 023333333245777888899999999
Q ss_pred HHHHHHHHhCCCCceeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 223 LCKATEEVVGHVNPYSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 223 ~~~a~~~~~g~~~~~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+.+++++.+|.+....+.|+++|+++++..++|++.||||..+.+|++|||+++++|.+++++|.+++.+|+.
T Consensus 336 l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~~~~fgp~~~~~~H~~~E~v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 336 LAEAAEELLGLPPEVSTGGGTHDARFFARLGIPAVIFGPGDIGLAHQPNEYVELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred HHHHHHHhhCCCceecCCCCcchHHHHHhcCCeeEEECCCCcccccCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 9999999888764444455657999999989999999999778999999999999999999999999999874
No 45
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.6e-32 Score=254.25 Aligned_cols=256 Identities=17% Similarity=0.098 Sum_probs=191.6
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEE---------ecCCCCCc-----------
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYW---------IDTADKQP----------- 60 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~---------~e~~~~~~----------- 60 (295)
+++|++.+.+++++|.|+|++|||+|+ .|++++++++. .+|++++ +|++...+
T Consensus 129 ~~~l~~~~~~~~~~i~~~~~~dEE~g~---~g~~~~~~~~~----~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~ 201 (466)
T TIGR01886 129 MKILKELGLPPSKKIRFVVGTNEETGW---VDMDYYFKHEE----TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGD 201 (466)
T ss_pred HHHHHHhCCCCCCCEEEEEECccccCc---ccHHHHHhcCc----CCCEEEECCCCceeEEEecceEEEEEEEecCCCCc
Confidence 357888888899999999999999998 79999998654 2456543 33322110
Q ss_pred -------------------------------------eeecccee---------eEEEEEEecCCCcCCCCCCCCHHHHH
Q 022583 61 -------------------------------------CIGTGGMI---------PWKLHVTGKLFHSGLPHKAINPLELA 94 (295)
Q Consensus 61 -------------------------------------~~~~~g~~---------~~~v~v~G~~~Hs~~p~~g~nai~~~ 94 (295)
..+++|.. |++|+++|+++|+|.|+.|+|||..|
T Consensus 202 ~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~ 281 (466)
T TIGR01886 202 YVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFL 281 (466)
T ss_pred eeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHH
Confidence 01345543 78899999999999999999999999
Q ss_pred HHHHHHH----------Hhh---hccCC-CCC-CcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCCh
Q 022583 95 MEALKVI----------QTR---FYKDF-PPH-PKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (295)
Q Consensus 95 ~~~i~~l----------~~~---~~~~~-~~~-~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~ 159 (295)
+++|..+ +.+ ...+. ... .......+.++.|+|++.|+ +|.. | ++|++.+|+|+.|+++.
T Consensus 282 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~S~nvgvI~-gG~~-~---~~~~l~iD~R~~Pge~~ 356 (466)
T TIGR01886 282 ALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDELMGDLAMNAGMFD-FDHA-N---KESKLLLNFRYPQGTSP 356 (466)
T ss_pred HHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCcccccCcCceEEEeEEEE-EecC-C---ceEEEEEEEecCCCCCH
Confidence 9988873 221 10000 000 00011223456899999998 6654 3 79999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-cee
Q 022583 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYS 238 (295)
Q Consensus 160 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~ 238 (295)
+++.++|++.+... .++++.. ...+|+..+.++++++.+.++++++.|.+. ...
T Consensus 357 eev~~eI~~~i~~~------------------------~~v~~~~-~~~~P~~~~~ds~lv~~l~~a~~~v~G~~~~~~~ 411 (466)
T TIGR01886 357 ETMQKQVLDKFGGI------------------------VDVTYNG-HFEEPHYVPGSDPLVQTLLKVYEKHTGKKGHEVI 411 (466)
T ss_pred HHHHHHHHHHHhcc------------------------cEEEEec-ccCCCcccCCCCHHHHHHHHHHHHHhCCCCceee
Confidence 99999988877631 1222211 134556678889999999999999988764 344
Q ss_pred ccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 239 ITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 239 ~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
.+++ +|+++|.. ++|++.||||...++|++||||++++|.+++++|.+++.+||+
T Consensus 412 ~~gg-TDa~~~~~-~i~~gv~gPG~~~~aH~~dE~V~i~el~~a~~iy~~~i~~l~~ 466 (466)
T TIGR01886 412 IGGG-TYGRLLER-GVAYGAMFEGGPDVMHQANEFMMLDDLILAAAIYAEAIYELAK 466 (466)
T ss_pred ecCc-cHHHhccc-ccccccccCCCCCCccCCCcceEHHHHHHHHHHHHHHHHHHhC
Confidence 5666 59999874 7998899999878899999999999999999999999999985
No 46
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2.4e-32 Score=249.56 Aligned_cols=248 Identities=16% Similarity=0.159 Sum_probs=192.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCC-CCCceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~-~~~~~~~~~g~~~~~v~v~G~~~H 80 (295)
+.|++.+ .++++|.|+|++|||.|+ .|+++++.+++ .+|++++.|.. .+.+.++++|..+++|+++|+++|
T Consensus 151 ~~l~~~~-~~~g~i~~~~~~dEE~g~---~G~~~~~~~~~----~~d~~~~~~~~~~~~i~~~~~G~~~~~v~v~Gk~aH 222 (404)
T PRK13381 151 ENLTENE-VEHGDIVVAFVPDEEIGL---RGAKALDLARF----PVDFAYTIDCCELGEVVYENFNAASAEITITGVTAH 222 (404)
T ss_pred HHHHhcC-CCCCCEEEEEEccccccc---ccHHHHHHhcC----CCCEEEEecCCCcceEEEecCcceEEEEEEEeEecC
Confidence 3455554 468899999999999987 79999986543 35777766533 346778999999999999999999
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCCh
Q 022583 81 SGL-PHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (295)
Q Consensus 81 s~~-p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~ 159 (295)
++. |+.|.|||..+++++.+|++...+..... ...+++++.|+ ++ |++|++.+|+|+.|+++.
T Consensus 223 a~~~p~~g~NAI~~a~~~i~~l~~~~~~~~~~~---------~~~~i~v~~i~-g~------p~~~~~~~diR~~~~~~~ 286 (404)
T PRK13381 223 PMSAKGVLVNPILMANDFISHFPRQETPEHTEG---------REGYIWVNDLQ-GN------VNKAKLKLIIRDFDLDGF 286 (404)
T ss_pred CCCCcccCcCHHHHHHHHHHhCCccCCCCCCCC---------cccEEEEEeEE-eC------cceEEEEEEEecCCHHHH
Confidence 884 89999999999999999987532221110 12356667666 42 899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcc-eeEEEEeccC--CCccccCCCCHHHHHHHHHHHHHhCCCCc
Q 022583 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIR-GSLTLTFDEA--TNGVACNLDSRGFHVLCKATEEVVGHVNP 236 (295)
Q Consensus 160 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~p~~~~~~~~~~~~~~~~a~~~~~g~~~~ 236 (295)
+++.++|++.+++..... + +++++++... .++..++.++++++.+++++++. |.++.
T Consensus 287 e~i~~~i~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~ 346 (404)
T PRK13381 287 EARKQFIEEVVAKINAKY-------------------PTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEPK 346 (404)
T ss_pred HHHHHHHHHHHHHHHHHc-------------------CCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCee
Confidence 999999999888765431 1 3455544333 34556777889999999999874 65433
Q ss_pred e-eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 237 Y-SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 237 ~-~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
. .+.++ +|+++|...|+|+++||||. ..+|++||+|++++|.+++++|.+++..+++
T Consensus 347 ~~~~~g~-tDa~~~~~~giP~v~~GpG~-~~aH~~dE~v~i~~l~~~~~v~~~~~~~~~~ 404 (404)
T PRK13381 347 VIPMRGG-TDGAALSAKGLPTPNLFTGA-HNFHSRFEFLPVSSFVKSYEVTITICLLAAK 404 (404)
T ss_pred eccCCcc-chHHHHhcCCCCeEEECccc-cCCcCcceeEEHHHHHHHHHHHHHHHHHhcC
Confidence 3 34555 58999988899999999996 5699999999999999999999999998874
No 47
>PRK05469 peptidase T; Provisional
Probab=99.98 E-value=4.7e-31 Score=241.33 Aligned_cols=249 Identities=16% Similarity=0.113 Sum_probs=188.2
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC-CCceeeccceeeEEEEEEecCCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~~~~~~~g~~~~~v~v~G~~~H 80 (295)
++|++.+..++++|.|+|++|||.| .|+++++.+. .+.|++++.++.. +.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~~~~~g~v~~~f~~dEE~g----~Ga~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~g~~~~~i~v~Gk~~H 224 (408)
T PRK05469 153 EYLIAHPEIKHGDIRVAFTPDEEIG----RGADKFDVEK----FGADFAYTVDGGPLGELEYENFNAASAKITIHGVNVH 224 (408)
T ss_pred HHHHhCCCCCCCCEEEEEecccccC----CCHHHhhhhh----cCCcEEEEecCCCcceEEeccCceeEEEEEEeeecCC
Confidence 4566666667899999999999986 4898886443 2345666555432 35777889999999999999999
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCCh
Q 022583 81 SGL-PHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (295)
Q Consensus 81 s~~-p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~ 159 (295)
++. |+.|.||+..+++++..|++........ ....+++++.|+ | .|++|++.+++|+.|+++.
T Consensus 225 a~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~---------~~~~~i~~g~i~-g------gp~~~~i~~diR~~~~e~~ 288 (408)
T PRK05469 225 PGTAKGKMVNALLLAADFHAMLPADETPETTE---------GYEGFYHLTSIK-G------TVEEAELSYIIRDFDREGF 288 (408)
T ss_pred CCCCcccccCHHHHHHHHHHhCCCCCCCCCCC---------CceEEEEEEEEE-E------ccceEEEEEEEecCCHHHH
Confidence 875 8999999999999999887643111110 012345666666 4 3899999999999998888
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCc--cccCCCCHHHHHHHHHHHHHhCCCCce
Q 022583 160 TDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNG--VACNLDSRGFHVLCKATEEVVGHVNPY 237 (295)
Q Consensus 160 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~a~~~~~g~~~~~ 237 (295)
+++.++|++.++++..... ++++++++...+++ ..++.++++++.+++++++. |.++..
T Consensus 289 e~i~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~~ 349 (408)
T PRK05469 289 EARKALMQEIAKKVNAKYG------------------EGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPII 349 (408)
T ss_pred HHHHHHHHHHHHHHHHHcC------------------CCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcEE
Confidence 8888888888877643210 24455555444442 34667789999999999874 654333
Q ss_pred -eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 238 -SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 238 -~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
.+.|+ +|++++...|+|++.||||. ..+|++||++++++|..++++|.+++..||+
T Consensus 350 ~~~~gg-tD~~~~~~~giP~v~~gpG~-~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~ 406 (408)
T PRK05469 350 KPIRGG-TDGSQLSFMGLPCPNIFTGG-HNFHGKFEFVSLESMEKAVEVIVEIAELTAE 406 (408)
T ss_pred ecCCCc-ccHHHHhhCCCceEEECcCc-ccCcCcceeeEHHHHHHHHHHHHHHHHHHhc
Confidence 34566 58888887899999999995 4699999999999999999999999999985
No 48
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.98 E-value=1.5e-31 Score=244.51 Aligned_cols=249 Identities=16% Similarity=0.104 Sum_probs=183.7
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEEEecCCCc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v~G~~~Hs 81 (295)
++|++.+..++++|.|+|++|||.| .|++++..++. +.++++++.++|+. .+.+..+|..+++|+++|+++|+
T Consensus 155 ~~L~e~~~~~~g~I~~~ft~dEE~g----~Ga~~l~~~~~--~~~~~~~i~gep~g-~i~~~~~g~~~~~I~v~Gk~aHa 227 (410)
T TIGR01882 155 DYLINHPEIKHGTIRVAFTPDEEIG----RGAHKFDVKDF--NADFAYTVDGGPLG-ELEYETFSAAAAKITIQGNNVHP 227 (410)
T ss_pred HHHHhCCCCCCCCEEEEEECcccCC----cCcchhhhhhc--CccEEEEeCCCCCC-eEEEccccceEEEEEEEEEecCc
Confidence 5666654346899999999999986 48888865432 22233445444444 35666679999999999999999
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChH
Q 022583 82 GLP-HKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (295)
Q Consensus 82 ~~p-~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~ 160 (295)
+.+ +.++||+..+.+++..+.... .+. .++-+.+.++ ++ ..|.+|++|++.+++|+.++++.+
T Consensus 228 ~~~~~~g~nAi~~a~~~~~~l~~~~----~~~----------~t~~~~g~i~-~g-~i~giPd~a~l~~diR~~~~e~~e 291 (410)
T TIGR01882 228 GTAKGKMINAAQIAIDLHNLLPEDD----RPE----------YTEGREGFFH-LL-SIDGTVEEAKLHYIIRDFEKENFQ 291 (410)
T ss_pred ccChHHHHHHHHHHHHHHHhcCCcC----CCc----------cccceeEEEE-EE-eEEEecCEEEEEEEEecCCHHHHH
Confidence 975 689999999998877665421 100 0111224455 33 467799999999999999988888
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcc-eeEEEEeccCCC--ccccCCCCHHHHHHHHHHHHHhCCCC-c
Q 022583 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIR-GSLTLTFDEATN--GVACNLDSRGFHVLCKATEEVVGHVN-P 236 (295)
Q Consensus 161 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p--~~~~~~~~~~~~~~~~a~~~~~g~~~-~ 236 (295)
+++++|++.++++.... + ..+++++...++ ++..+.++++++.+.+++++. |.++ .
T Consensus 292 ~i~~~i~~i~~~~~~~~-------------------g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~~ 351 (410)
T TIGR01882 292 ERKELMKRIVEKMNNEY-------------------GQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPKI 351 (410)
T ss_pred HHHHHHHHHHHHHHHHc-------------------CCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCCCcc
Confidence 88888888888764321 2 134455444454 456778889999999999874 6443 2
Q ss_pred eeccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 237 YSITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 237 ~~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
....|| +|+++|...|+|++.||||. .++|++||||++++|.+++++|.+++..+++
T Consensus 352 ~~~~gg-tDa~~~~~~Gip~~~~G~G~-~~aHt~dE~v~i~~l~~~~~~~~~li~~~~~ 408 (410)
T TIGR01882 352 SPIRGG-TDGSQLSYMGLPTPNIFAGG-ENMHGRFEYISVDNMVKAVDVIVEIAKLNEE 408 (410)
T ss_pred ccccee-chHHHHHhCCCCCCeEcCCc-ccCcCCceEEEHHHHHHHHHHHHHHHHHHhh
Confidence 334556 58999988999999999995 6799999999999999999999999988763
No 49
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.98 E-value=4.4e-31 Score=245.14 Aligned_cols=259 Identities=17% Similarity=0.142 Sum_probs=188.2
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc--cCCCCc---EEEecCCCCC----------------
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGGP---LYWIDTADKQ---------------- 59 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~--~~~~d~---~i~~e~~~~~---------------- 59 (295)
++.|++.+..++++|.|+|++|||.|+ .|+++++++.... .+.+|+ ++++|++...
T Consensus 130 l~~l~~~g~~~~~~i~l~~~~DEE~g~---~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07318 130 LKIIKELGLPLSKKVRFIVGTDEESGW---KCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVL 206 (466)
T ss_pred HHHHHHcCCCCCccEEEEEEcccccCc---hhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCcee
Confidence 356777888888999999999999998 7999999864211 111222 3445442100
Q ss_pred ------------------------------------ceeecccee-----eEEEEEEecCCCcCCCCCCCCHHHHHHHHH
Q 022583 60 ------------------------------------PCIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEAL 98 (295)
Q Consensus 60 ------------------------------------~~~~~~g~~-----~~~v~v~G~~~Hs~~p~~g~nai~~~~~~i 98 (295)
+..++||.. |++|+++|+++|++.|+.|.|||..|+++|
T Consensus 207 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i 286 (466)
T PRK07318 207 VSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFL 286 (466)
T ss_pred EEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHH
Confidence 002567755 799999999999999999999999999999
Q ss_pred HHHHhh------h---ccCCC--CC--C--cccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHH
Q 022583 99 KVIQTR------F---YKDFP--PH--P--KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVM 163 (295)
Q Consensus 99 ~~l~~~------~---~~~~~--~~--~--~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~ 163 (295)
.+|+.. . ....+ .. . ........+..|+|++.|+ +|... +|++.+|+|+.|+++.+++.
T Consensus 287 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~-gg~~~-----~~~~~iDiR~~p~~~~~~v~ 360 (466)
T PRK07318 287 NQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFS-FDEEK-----GGTLGLNFRYPVGTDFEKIK 360 (466)
T ss_pred HhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEE-EecCc-----EEEEEEEEeCCCCCCHHHHH
Confidence 998641 0 00000 00 0 0001112234688999998 55321 79999999999999999999
Q ss_pred HHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCC
Q 022583 164 KRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGT 242 (295)
Q Consensus 164 ~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg 242 (295)
++|++.+++. .++++....+||+..+.++++++.+++++++..|.+. ...+.|+
T Consensus 361 ~~i~~~~~~~-------------------------~~~~~~~~~~~p~~~~~d~~lv~~l~~a~~~~~g~~~~~~~~~gg 415 (466)
T PRK07318 361 AKLEKLIGVT-------------------------GVELSEHEHQKPHYVPKDDPLVKTLLKVYEKQTGLKGEEQVIGGG 415 (466)
T ss_pred HHHHHHHHhc-------------------------CeEEEEccCCCceeeCCCCHHHHHHHHHHHHHhCCCCCeeEEcch
Confidence 9888886641 2445555567887778899999999999999888654 3445556
Q ss_pred chhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 243 LPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 243 ~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+|++++.. ++|+..++||...++|++||++++++|.+++++|.+++.+||+
T Consensus 416 -tDa~~~~~-~i~~Gp~~pg~~~~aH~~dE~v~i~~l~~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 416 -TYARLLKR-GVAFGAMFPGSEDTMHQANEYIEIDDLIKAAAIYAEAIYELAK 466 (466)
T ss_pred -HhHhhCCC-eEEeCCCCCCCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHhC
Confidence 59998864 6665555577656799999999999999999999999999985
No 50
>PLN02693 IAA-amino acid hydrolase
Probab=99.98 E-value=3.4e-30 Score=236.35 Aligned_cols=253 Identities=17% Similarity=0.233 Sum_probs=186.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC----Cce----eeccceeeEEEE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK----QPC----IGTGGMIPWKLH 73 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~----~~~----~~~~g~~~~~v~ 73 (295)
++|++.+..++++|.|+|++|||. + .|++.+++++.+++ .|+++..|..+. .+. ..++|..+++|+
T Consensus 149 ~~L~~~~~~~~g~V~~if~pdEE~-~---~Ga~~~i~~g~~~~--~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~ 222 (437)
T PLN02693 149 KILQEHRHHLQGTVVLIFQPAEEG-L---SGAKKMREEGALKN--VEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAV 222 (437)
T ss_pred HHHHhCcccCCceEEEEEEEcccc-h---hhHHHHHHCCCCCC--CCEEEEEecCCCCCCeeEEeccCcccccceEEEEE
Confidence 567777667889999999999994 3 59999999887543 355554443322 121 125789999999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEe
Q 022583 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (295)
Q Consensus 74 v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~ 153 (295)
++|+++|++.|+.|+|||..+++++.+|+++..+..++. .+.+++++.|+ ||...|+||++|++.+++|+
T Consensus 223 v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~---------~~~ti~vg~i~-GG~~~NvVPd~a~~~~diR~ 292 (437)
T PLN02693 223 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPL---------DSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 292 (437)
T ss_pred EEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCC---------CCcEEEEEEEE-cCCCCceECCeEEEEEEEec
Confidence 999999999999999999999999999998743322221 25789999998 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc-CCCccc-cCCCCHHHHHHHHHHHHHh
Q 022583 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE-ATNGVA-CNLDSRGFHVLCKATEEVV 231 (295)
Q Consensus 154 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~-~~~~~~~~~~~~~a~~~~~ 231 (295)
.|++ +++.++|++.+++.+.. +++++++++.. .+|++. +..+.++++.+++++++.+
T Consensus 293 ~~~~--~~i~~~i~~i~~~~a~~-------------------~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~ 351 (437)
T PLN02693 293 FTGF--TQLQQRIKEIITKQAAV-------------------HRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLL 351 (437)
T ss_pred CCHH--HHHHHHHHHHHHHHHHH-------------------hCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhc
Confidence 9863 46666666666654322 13445555432 234432 3334579999999999988
Q ss_pred CCCCc---eeccCCchhhHhhhhcCCCeE--EEcCCC----CCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 232 GHVNP---YSITGTLPLIRELQDEGFDVQ--TAGYGL----MATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 232 g~~~~---~~~~gg~~d~~~~~~~g~p~v--~~gpg~----~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
|.+.. ....|+ +|.+++.+ .+|.+ .+|++. ....|+++|+++.+.|..+++++..++.++
T Consensus 352 G~~~~~~~~~~~gs-eDf~~~~~-~vP~~~~~lG~~~~~~~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~ 420 (437)
T PLN02693 352 GQEAFVEAAPEMGS-EDFSYFAE-TIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHATMAVQY 420 (437)
T ss_pred CCcceeecCCCcee-chHHHHHH-HhhhhEEEEecCCCCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 86522 123455 57777776 68887 556653 136899999999999999999999988776
No 51
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=99.97 E-value=7.1e-30 Score=227.82 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=206.4
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC----Ccee----eccceeeEEEE
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK----QPCI----GTGGMIPWKLH 73 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~----~~~~----~~~g~~~~~v~ 73 (295)
++|++...+++|+|+|+|||.||.++ |++.|+++|.+++. +|+++..|+.++ .+.+ -..+...++++
T Consensus 116 ~~L~~~~~~~~Gtv~~ifQPAEE~~~----Ga~~mi~~G~~~~~-vD~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~ 190 (392)
T COG1473 116 LALAEHKDNLPGTVRLIFQPAEEGGG----GAKAMIEDGVFDDF-VDAVFGLHPGPGLPVGTVALRPGALMAAADEFEIT 190 (392)
T ss_pred HHHHhhhhhCCcEEEEEecccccccc----cHHHHHhcCCcccc-ccEEEEecCCCCCCCceEEeecccceeecceEEEE
Confidence 56777767899999999999999984 89999999988886 799999998654 2221 25578899999
Q ss_pred EEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEe
Q 022583 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (295)
Q Consensus 74 v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~ 153 (295)
++|+++|++.|+.++||+.+++.++..|+.+..+.++|.+ +.+++++.++ +|...|+||+++++..++|.
T Consensus 191 ~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~---------~~vv~vg~~~-aG~a~NVIpd~A~l~gtvR~ 260 (392)
T COG1473 191 FKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLD---------SAVVTVGKIE-AGTAANVIPDSAELEGTIRT 260 (392)
T ss_pred EEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCcc---------CeEEEEEEec-CCCcCCcCCCeeEEEEEeec
Confidence 9999999999999999999999999999998777776643 4788999998 99999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCC
Q 022583 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGH 233 (295)
Q Consensus 154 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~ 233 (295)
.. .++.+.+.+.++++++.++ ..+++++++++...+|+..+++. +.+.+.+++++..|.
T Consensus 261 ~~----~~~~~~~~~~i~~ia~g~a---------------~~~g~~~ei~~~~~~p~~~Nd~~--~~~~~~~~~~~~~~~ 319 (392)
T COG1473 261 FS----DEVREKLEARIERIAKGIA---------------AAYGAEAEIDYERGYPPVVNDPA--LTDLLAEAAEEVGGE 319 (392)
T ss_pred CC----HHHHHHHHHHHHHHHHHHH---------------HHhCCeEEEEecCCCCCccCCHH--HHHHHHHHHHHhccc
Confidence 97 6677777777777666655 44578999999999999876654 799999999999874
Q ss_pred C-----CceeccCCchhhHhhhhcCCCeEEEcCCC--CC----cCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 234 V-----NPYSITGTLPLIRELQDEGFDVQTAGYGL--MA----TYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 234 ~-----~~~~~~gg~~d~~~~~~~g~p~v~~gpg~--~~----~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
. ....+.||+|++.+.+. +|...|-.|. .. ..|.+...++.+.+..+++++..+...+
T Consensus 320 ~~~~~~~~~~~~gsEDf~~~~~~--~Pg~~~~lG~~~~~~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~ 388 (392)
T COG1473 320 EVVVVELPPSMAGSEDFGYYLEK--VPGAFFFLGTGSADGGTYPLHHPKFDFDEAALATGVKLLAALALLY 388 (392)
T ss_pred cceecccCCCCCccchHHHHHHh--CCeeEEEeecCcCCCCcccccCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3 12224488777665544 5666554443 22 3899999999999999999999988765
No 52
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.97 E-value=3.6e-30 Score=234.59 Aligned_cols=257 Identities=12% Similarity=0.071 Sum_probs=192.2
Q ss_pred ChhhhcccCCCceeEEEEEEeccccC-----CCCCcCHHHHHHcc----cc---c-------------cC----------
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENS-----AITGVGVDALVKDG----LL---N-------------KL---------- 45 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g-----~~~~~Ga~~l~~~~----~~---~-------------~~---------- 45 (295)
++.|++.+..++++|.+++..+||.+ . .|++.+.... .+ + ++
T Consensus 100 ~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~---~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~ 176 (406)
T TIGR03176 100 VDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVF---WGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAPTVRD 176 (406)
T ss_pred HHHHHHcCCCCCCCeEEEEeccccCccCCccc---ccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccccccccc
Confidence 46788998999999999999999986 4 6787776311 00 0 00
Q ss_pred CCCcEEEecCC----------CCCceeeccceeeEEEEEEecCCCcCCCCC--CCCHHHHHHHHHHHHHhhhccCCCCCC
Q 022583 46 KGGPLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSGLPHK--AINPLELAMEALKVIQTRFYKDFPPHP 113 (295)
Q Consensus 46 ~~d~~i~~e~~----------~~~~~~~~~g~~~~~v~v~G~~~Hs~~p~~--g~nai~~~~~~i~~l~~~~~~~~~~~~ 113 (295)
+.++.+=.|-. ...++++++|..+++|+++|+++|+|.+.. +.||+..+++++..+.+...+ ..
T Consensus 177 ~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~-~~--- 252 (406)
T TIGR03176 177 DIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE-IG--- 252 (406)
T ss_pred ccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh-cC---
Confidence 11222223321 123557999999999999999999997654 489999999999999876322 11
Q ss_pred cccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCC
Q 022583 114 KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPD 193 (295)
Q Consensus 114 ~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~ 193 (295)
.+.+++++.|+.++...|+||++|++.+|+|..|+++.+++.+++++.+++++..
T Consensus 253 --------~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~----------------- 307 (406)
T TIGR03176 253 --------DPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADE----------------- 307 (406)
T ss_pred --------CCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 1358899999845788999999999999999999888888888888888876543
Q ss_pred CCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhhHhhhhcCCCe-EEEcCCCCCcCCCCCc
Q 022583 194 ENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLIRELQDEGFDV-QTAGYGLMATYHADNE 272 (295)
Q Consensus 194 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~~~~~~~g~p~-v~~gpg~~~~~H~~dE 272 (295)
++++++++.....+| .+.++++++.+.+++++..+......+.|+ +|+.+|.+. +|+ +.|||+.....|++||
T Consensus 308 --~g~~~ei~~~~~~~p--~~~d~~lv~~l~~a~~~~~~~~~~~~sggg-~Da~~~~~~-vP~~~ifgp~~~g~~H~p~E 381 (406)
T TIGR03176 308 --MDITIDIDLWMDEAP--VPMNKEIVAIIEQLAKAEKLNYRLMHSGAG-HDAQIFAPR-VPTAMIFVPSIGGISHNPAE 381 (406)
T ss_pred --cCCeEEEEEEecCCC--CCCCHHHHHHHHHHHHHcCCCceecCcccH-HHHHHHHHH-CCEEEEEEeCCCCCCCCccc
Confidence 135555554333333 345678999999999886554333344556 588888875 888 5688986567899999
Q ss_pred cccHHHHHHHHHHHHHHHHhhhC
Q 022583 273 YCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 273 ~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
++++++|..++++|..++.+|+.
T Consensus 382 ~v~~e~l~~g~~vl~~~l~~l~~ 404 (406)
T TIGR03176 382 RTNIEDLVEGVKTLADMLYELAY 404 (406)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998864
No 53
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.97 E-value=1.5e-29 Score=234.17 Aligned_cols=263 Identities=15% Similarity=0.169 Sum_probs=193.0
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC-CCceeec----------------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGT---------------- 64 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~~~~~~---------------- 64 (295)
.+|++.+. .+++|.|+|++|||.|+ .|++++.. .. .++|++|+.||+. +.+++++
T Consensus 125 ~~l~~~~~-~~~~i~~l~t~dEE~G~---~ga~~l~~-~~---~~~~~~i~~e~~~~g~l~~g~~G~~~~~~~~~~~r~~ 196 (485)
T PRK15026 125 AVLADENV-VHGPLEVLLTMTEEAGM---DGAFGLQS-NW---LQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREA 196 (485)
T ss_pred HHHHhCCC-CCCCEEEEEEcccccCc---HhHHHhhh-cc---CCcCEEEEeCCCCCCeEEEeCCCcceEEEEEEEEEEe
Confidence 34555554 48899999999999998 79999864 22 3578999999974 4565555
Q ss_pred --cceeeEEEEEEe-cCCCcC-CCCCCC-CHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcc
Q 022583 65 --GGMIPWKLHVTG-KLFHSG-LPHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGIN 139 (295)
Q Consensus 65 --~g~~~~~v~v~G-~~~Hs~-~p~~g~-nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n 139 (295)
+|..+++|+++| +++||+ .|+.|. |||..|+++|.++.. ..+++++.|+ ||...|
T Consensus 197 ~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~~-------------------~~~~~v~~i~-GG~~~N 256 (485)
T PRK15026 197 VPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE-------------------ELDLRLIDFN-GGTLRN 256 (485)
T ss_pred cCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhHh-------------------hCCeEEEEEe-CCCccC
Confidence 466789999999 999999 599998 999999999998542 1577999998 999999
Q ss_pred eeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhh------------------------------h-------hcccc
Q 022583 140 QIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN------------------------------I-------EKLDT 182 (295)
Q Consensus 140 ~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~------------------------------~-------~~~~~ 182 (295)
+||++|++.+++|.......+++.+.+.+.+++.... + -++..
T Consensus 257 aIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~ 336 (485)
T PRK15026 257 AIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSD 336 (485)
T ss_pred CCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEecc
Confidence 9999999999999876444455555554444421100 0 00001
Q ss_pred CCCCcccccCC------CCcc----------------------------eeEEEEeccCCCccccCCCCHHHHHHHHHHH
Q 022583 183 RGPVSKYVLPD------ENIR----------------------------GSLTLTFDEATNGVACNLDSRGFHVLCKATE 228 (295)
Q Consensus 183 ~~~~~~~~~~~------~~~~----------------------------~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~ 228 (295)
..++...+.-| .... ...+++....||||..++++|+++.+.++++
T Consensus 337 ~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~~~~~~~~p~w~~~~ds~lv~~l~~~y~ 416 (485)
T PRK15026 337 VAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQ 416 (485)
T ss_pred CCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 11100000000 0000 1123455567999999999999999999999
Q ss_pred HHhCCCC-ceeccCCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 229 EVVGHVN-PYSITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 229 ~~~g~~~-~~~~~gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
+++|+++ .....||+ |++.|.+ .++|+|.|||+ ...+|++||+++++++...++++.++|.+++
T Consensus 417 e~~G~~~~~~~ihagl-EcG~~~~~~p~i~~VsfGP~-~~~~HspdE~v~I~s~~~~~~~l~~~l~~~~ 483 (485)
T PRK15026 417 RLFNKTPNIQIIHAGL-ECGLFKKPYPEMDMVSIGPT-ITGPHSPDEQVHIESVGHYWTLLTELLKEIP 483 (485)
T ss_pred HHHCCCCeEEEEEEEe-hHHHHHhhCCCCCEEEECCC-CCCCCCCCcEEEhHHHHHHHHHHHHHHHhhh
Confidence 9999874 45677886 5556663 59999999999 4679999999999999999999999998873
No 54
>PRK07205 hypothetical protein; Provisional
Probab=99.97 E-value=1.5e-28 Score=227.00 Aligned_cols=254 Identities=16% Similarity=0.149 Sum_probs=178.8
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc--cCCCC--------------cEEEecCCCCC------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGG--------------PLYWIDTADKQ------ 59 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~--~~~~d--------------~~i~~e~~~~~------ 59 (295)
+.|++.+..++++|.|+|++|||+|+ .|++++++..... .+.+| ++|.++|+...
T Consensus 129 ~~l~~~~~~~~~~i~l~~~~dEE~g~---~g~~~~~~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~ 205 (444)
T PRK07205 129 KALLDAGVQFNKRIRFIFGTDEETLW---RCMNRYNEVEEQATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQ 205 (444)
T ss_pred HHHHHcCCCCCCcEEEEEECCcccCc---ccHHHHHhCCCCCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCC
Confidence 56777888889999999999999998 6888888642110 11223 13444554220
Q ss_pred -----cee---------------eccc----eeeEEEEEEecCCCcCCCCCCCCHHHHHHHHHHHHHhhh-----ccCCC
Q 022583 60 -----PCI---------------GTGG----MIPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRF-----YKDFP 110 (295)
Q Consensus 60 -----~~~---------------~~~g----~~~~~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~-----~~~~~ 110 (295)
+.. +.+| ..+.+|+++|+++|++.|+.|.|||..+++++.++++.. ...+.
T Consensus 206 ~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 285 (444)
T PRK07205 206 AFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIG 285 (444)
T ss_pred cccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcC
Confidence 000 1123 134499999999999999999999999999999886421 01110
Q ss_pred CCC------cccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCC
Q 022583 111 PHP------KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRG 184 (295)
Q Consensus 111 ~~~------~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~ 184 (295)
... ...........|+|++. .|+||++|++.+|+|+.|+++.+++.+.+++.+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~t~nvg~-------~nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~~----------- 347 (444)
T PRK07205 286 EDATGLNIFGDIEDEPSGKLSFNIAG-------LTITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQEY----------- 347 (444)
T ss_pred CCCccccCCccccCCCcCCceEEeEE-------EEEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHHc-----------
Confidence 000 00001111224444443 479999999999999999999999999998876641
Q ss_pred CCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCc-eeccCCchhhHhhhhcCCCeEEEc---
Q 022583 185 PVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSITGTLPLIRELQDEGFDVQTAG--- 260 (295)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~-~~~~gg~~d~~~~~~~g~p~v~~g--- 260 (295)
.++++....++|+..+.++++++.+.+++++.+|.+.. ..+.|+ +|+.+ ..|++.||
T Consensus 348 --------------~v~~~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~~~~~gg~-~~~~~----~~~~i~~G~~~ 408 (444)
T PRK07205 348 --------------GLTYEEFDYLAPLYVPLDSELVSTLMSVYQEKTGDDSPAQSSGGA-TFART----MPNCVAFGALF 408 (444)
T ss_pred --------------CcEEEEecCCCceeeCCCcHHHHHHHHHHHHHhCCCCceEEeccH-HHHHh----CCCcEEECCcc
Confidence 12233334578888889999999999999998887533 334444 35543 35788999
Q ss_pred CCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 261 YGLMATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 261 pg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
||...++|++||+++++++.+++++|.+++.+||+
T Consensus 409 Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 409 PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhc
Confidence 87667899999999999999999999999999874
No 55
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.97 E-value=1.3e-28 Score=229.07 Aligned_cols=255 Identities=17% Similarity=0.179 Sum_probs=183.1
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecC-----------CCCCc------eee--ccceeeE
Q 022583 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT-----------ADKQP------CIG--TGGMIPW 70 (295)
Q Consensus 10 ~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~-----------~~~~~------~~~--~~g~~~~ 70 (295)
.++++|.++|++|||.|+ .|++++..+.. ..+++++.++ +.... .+. ++|..++
T Consensus 126 ~~~~~i~~~~~~dEE~g~---~Gs~~l~~~~~----~~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~ 198 (477)
T TIGR01893 126 LKHPPLELLFTVDEETGM---DGALGLDENWL----SGKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGY 198 (477)
T ss_pred CCCCCEEEEEEeccccCc---hhhhhcChhhc----CCcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEE
Confidence 356799999999999987 79999976543 2244454443 22110 111 5899999
Q ss_pred EEEEEe-cCCCcCC-CCCC-CCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEE
Q 022583 71 KLHVTG-KLFHSGL-PHKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 147 (295)
Q Consensus 71 ~v~v~G-~~~Hs~~-p~~g-~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~ 147 (295)
+|+++| +++|+|. |..+ .||+..|+++|.++.+.. ..+++.+. ||...|+||++|++
T Consensus 199 ~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~-------------------~~~v~~~~-gg~~~N~ip~~~~~ 258 (477)
T TIGR01893 199 QISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL-------------------NFRLSDIK-GGSKRNAIPREAKA 258 (477)
T ss_pred EEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC-------------------CeEEEEEe-CCCcccccCCceEE
Confidence 999999 9999985 8888 599999999999988741 13567787 89999999999999
Q ss_pred EEEEEeCCCCChHHHHHHHHHHHHHhhhh-------------------------------------hhccccCCCC----
Q 022583 148 SGDVRLTPFYNVTDVMKRLQEYVDDINEN-------------------------------------IEKLDTRGPV---- 186 (295)
Q Consensus 148 ~~~~R~~~~~~~~~~~~~i~~~i~~~~~~-------------------------------------~~~~~~~~~~---- 186 (295)
.+|+|.......+..++++.+.+...... +.+++...|+
T Consensus 259 ~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 338 (477)
T TIGR01893 259 LIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVES 338 (477)
T ss_pred EEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEe
Confidence 99999887666666666666655543311 0000000000
Q ss_pred ------------------cccccCCCC------------cceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCc
Q 022583 187 ------------------SKYVLPDEN------------IRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP 236 (295)
Q Consensus 187 ------------------~~~~~~~~~------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~ 236 (295)
.-...|+.. ...++++++...+||+.+++++|+++.+.+++++.+|.++.
T Consensus 339 t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~~~~~~p~~~~~d~plv~~l~~a~~~~~g~~~~ 418 (477)
T TIGR01893 339 SLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEVSAGYPSWQPDPQSNLLDTARKVYSEMFGEDPE 418 (477)
T ss_pred eeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEEecCCCcccCCCCCHHHHHHHHHHHHHHCCCCe
Confidence 000000000 00134555556789999999999999999999999997654
Q ss_pred -eeccCCchhhHhhhhc--CCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 237 -YSITGTLPLIRELQDE--GFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 237 -~~~~gg~~d~~~~~~~--g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
..+.|++ |+++|... ++|++.|||+ ..++|++||+|++++|.++++++.+++..|
T Consensus 419 ~~~~~Ggt-d~~~~~~~~~~i~~v~~Gp~-~~~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 419 VKVIHAGL-ECGIISSKIPDIDMISIGPN-IYDPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred EEEeecCc-cHHHHHhhCCCceEEEeCCC-CCCCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 3456664 68888763 7999999998 478999999999999999999999999765
No 56
>PRK06156 hypothetical protein; Provisional
Probab=99.97 E-value=1.9e-28 Score=229.88 Aligned_cols=255 Identities=14% Similarity=0.152 Sum_probs=184.7
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCc---------EEEecCCCCC-------------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGP---------LYWIDTADKQ------------- 59 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~---------~i~~e~~~~~------------- 59 (295)
+.|++.+.+++++|.|+|++|||.|+ .|+++++.+... +++ ++++|++...
T Consensus 167 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~G~~~~~~~~~~----~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~ 239 (520)
T PRK06156 167 KAIKDSGLPLARRIELLVYTTEETDG---DPLKYYLERYTP----PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGK 239 (520)
T ss_pred HHHHHcCCCCCceEEEEEecccccCc---hhHHHHHHhcCC----CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCC
Confidence 46777777888999999999999998 799999976532 233 3445543100
Q ss_pred ------------------------------------------ceeecccee---------eEEEEEEecCCCcCCCCCCC
Q 022583 60 ------------------------------------------PCIGTGGMI---------PWKLHVTGKLFHSGLPHKAI 88 (295)
Q Consensus 60 ------------------------------------------~~~~~~g~~---------~~~v~v~G~~~Hs~~p~~g~ 88 (295)
...+++|.+ |++|+++|+++|+|.|+.|.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~ 319 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGV 319 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCc
Confidence 011234555 89999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhccC------------CC----CC-C-cccccCCCCCccccceeeecCCCCcceeCCeeEEEEE
Q 022583 89 NPLELAMEALKVIQTRFYKD------------FP----PH-P-KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGD 150 (295)
Q Consensus 89 nai~~~~~~i~~l~~~~~~~------------~~----~~-~-~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~ 150 (295)
|||..+++++.+|++..... .. .. . -.....+.++.+++++.|. +|. ++|++.+|
T Consensus 320 NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~-gg~------~~~~l~iD 392 (520)
T PRK06156 320 NPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVG-QDD------KGTEVTVN 392 (520)
T ss_pred cHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEE-EeC------CeEEEEEE
Confidence 99999999999987621100 00 00 0 0001122234566777776 443 58999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHH
Q 022583 151 VRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEV 230 (295)
Q Consensus 151 ~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~ 230 (295)
+|+.|+++.++++++|++.+++.... .+.++++.. ...+|+..++++++++.+.+++++.
T Consensus 393 iR~~p~~~~eev~~~I~~~i~~~~~~-------------------~gv~ve~~~-~~~~p~~~~~d~~lv~~l~~a~~~~ 452 (520)
T PRK06156 393 LRRPVGKTPELLKGEIADALAAWQAK-------------------HQVALDIDY-YWGEPMVRDPKGPWLKTLLDVFGHF 452 (520)
T ss_pred eeCCCCCCHHHHHHHHHHHHHHHHhh-------------------cCceEEEee-cCCCceeeCCCCHHHHHHHHHHHHH
Confidence 99999999999999999998875321 124444432 2345666788999999999999999
Q ss_pred hCCCC-ceeccCCchhhHhhhhcCCCeEEEcCCC---CCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 231 VGHVN-PYSITGTLPLIRELQDEGFDVQTAGYGL---MATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 231 ~g~~~-~~~~~gg~~d~~~~~~~g~p~v~~gpg~---~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+|.++ +....|+ +|++++. +++.|||+. ...+|++||+|+++++.+++++|.++|.+|++
T Consensus 453 ~G~~~~~~~~~gg-TDa~~~~----~~v~fGP~~~g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 453 TGLDAKPVAIAGS-TNAKLFP----NAVSFGPAMPGVKYTGHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred hCCCCceeeecCh-hhhhhCC----ccEEEcCCCCCCCCCCcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 88764 4445556 5888763 589999953 34689999999999999999999999999874
No 57
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=99.97 E-value=1.1e-28 Score=222.41 Aligned_cols=238 Identities=18% Similarity=0.203 Sum_probs=182.3
Q ss_pred hhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCC--------ceeeccceeeEEEEE
Q 022583 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ--------PCIGTGGMIPWKLHV 74 (295)
Q Consensus 3 ~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~--------~~~~~~g~~~~~v~v 74 (295)
.|++.+..++++|.|+|++|||.+ .|++++++++.+++ .|++|+.||++.. ..++++|..+++|++
T Consensus 104 ~l~~~~~~~~~~i~~~~~~dEE~~----~G~~~~~~~~~~~~--~d~~i~~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~ 177 (363)
T TIGR01891 104 LLKKLADLLEGTVRLIFQPAEEGG----GGATKMIEDGVLDD--VDAILGLHPDPSIPAGTVGLRPGTIMAAADKFEVTI 177 (363)
T ss_pred HHHhchhhCCceEEEEEeecCcCc----chHHHHHHCCCCCC--cCEEEEECCCCCCCCeEEEECCCcceeecceEEEEE
Confidence 455555667899999999999985 59999998876543 4789999886421 234678999999999
Q ss_pred EecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeC
Q 022583 75 TGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLT 154 (295)
Q Consensus 75 ~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~ 154 (295)
+|+++|++.|+.|.||+..|++++.+++++.....+.. .+.+++++.|+ ||...|+||++|++.+|+|+.
T Consensus 178 ~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~---------~~~~~~i~~i~-gG~~~nvvP~~~~~~~diR~~ 247 (363)
T TIGR01891 178 HGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPS---------RPAVVTVGIIE-AGGAPNVIPDKASMSGTVRSL 247 (363)
T ss_pred EeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCC---------CCcEEEEEEEE-cCCCCcEECCeeEEEEEEEeC
Confidence 99999999999999999999999999988632222111 13688999998 888999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCC
Q 022583 155 PFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV 234 (295)
Q Consensus 155 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~ 234 (295)
|+++.+++.+++++.+++.... .+.+++++....+|+. ..++++++.+++++++.+|..
T Consensus 248 ~~~~~e~~~~~i~~~~~~~~~~-------------------~~~~ve~~~~~~~p~~--~~~~~l~~~l~~a~~~~~g~~ 306 (363)
T TIGR01891 248 DPEVRDQIIDRIERIVEGAAAM-------------------YGAKVELNYDRGLPAV--TNDPALTQILKEVARHVVGPE 306 (363)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-------------------hCCeEEEEEecCCCCc--cCCHHHHHHHHHHHHHhcCcc
Confidence 9888888888888888876432 1355666655556663 356789999999999987743
Q ss_pred -C---ceeccCCchhhHhhhhcCCCeEEEc-CCCC------CcCCCCCccccHHHH
Q 022583 235 -N---PYSITGTLPLIRELQDEGFDVQTAG-YGLM------ATYHADNEYCLLSDM 279 (295)
Q Consensus 235 -~---~~~~~gg~~d~~~~~~~g~p~v~~g-pg~~------~~~H~~dE~v~~~~l 279 (295)
. +..+.||+ |++++++. +|+++++ |+.. ...|+++...+.+-+
T Consensus 307 ~~~~~~~~~~gg~-Da~~~~~~-~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 307 NVAEDPEVTMGSE-DFAYYSQK-VPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred ceeccCCCCcccc-CHHHHHHh-CCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 2 22356674 89888874 8996643 4431 368999877776654
No 58
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.96 E-value=6.8e-29 Score=215.60 Aligned_cols=266 Identities=18% Similarity=0.216 Sum_probs=202.4
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecC--CCC---CceeeccceeeEEEEEE
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT--ADK---QPCIGTGGMIPWKLHVT 75 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~--~~~---~~~~~~~g~~~~~v~v~ 75 (295)
++.|+..+.+++++|.+.|.+|||.|+. .|++.+++...+++.. -+.+..|+ +.. .+++++||.+|++|+++
T Consensus 141 ir~L~~~g~kp~Rti~lsfvpDEEi~G~--~Gm~~fa~~~~~~~l~-~~filDEG~~se~d~~~vfyaEkg~w~~~v~~~ 217 (420)
T KOG2275|consen 141 IRNLKASGFKPKRTIHLSFVPDEEIGGH--IGMKEFAKTEEFKKLN-LGFILDEGGATENDFATVFYAEKGPWWLKVTAN 217 (420)
T ss_pred HHHHHhcCCCcCceEEEEecCchhccCc--chHHHHhhhhhhcccc-eeEEecCCCCCcccceeEEEEeeceeEEEEEec
Confidence 3678888999999999999999999975 8999998844444432 24566676 322 46899999999999999
Q ss_pred ecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCC
Q 022583 76 GKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTP 155 (295)
Q Consensus 76 G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~ 155 (295)
|+++|+|.+-. ..|+..+.+++.++.+.....+..............+|+|++.|+ ||.+.|++|..+++.+|+|+.|
T Consensus 218 G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~~vtT~Nv~~i~-GGv~~N~~P~~~ea~~dirv~~ 295 (420)
T KOG2275|consen 218 GTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLALGDVTTINVGIIN-GGVQSNVLPETFEAAFDIRVRP 295 (420)
T ss_pred CCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceeccceeEEeeeeee-cccccCcCchhheeeeeeEecc
Confidence 99999998433 257888888888887764222111111112223346999999999 9999999999999999999999
Q ss_pred CCChHHHHHHH-HHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEecc----CCCc-cccCCCCHHHHHHHHHHHH
Q 022583 156 FYNVTDVMKRL-QEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDE----ATNG-VACNLDSRGFHVLCKATEE 229 (295)
Q Consensus 156 ~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~-~~~~~~~~~~~~~~~a~~~ 229 (295)
..+..++.+++ ++..++. +-.+++++.. .+++ ...+.++|+...+..++++
T Consensus 296 ~~d~~~i~~~l~~~w~~~~-----------------------~eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~~~ 352 (420)
T KOG2275|consen 296 HVDVKAIRDQLEDEWAEEA-----------------------GEGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGALKD 352 (420)
T ss_pred CCCHHHHHHHHHHHhhhhc-----------------------CCceEEeccCcccCCCCCCCCCCCCChHHHHHHHHHHH
Confidence 99998888888 4444432 1224444432 3444 3445567999999999999
Q ss_pred HhCCCCceeccCCchhhHhhhhcCCCeEEEcCCC--CCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 230 VVGHVNPYSITGTLPLIRELQDEGFDVQTAGYGL--MATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 230 ~~g~~~~~~~~gg~~d~~~~~~~g~p~v~~gpg~--~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
..++-.+...+|+| |.+++++.|+|+..|-|+. ....|..||++..+.+++++++|..+|.++++
T Consensus 353 ~~~k~~~~i~~gst-dsr~~rn~gvp~~~fsp~~nt~~~~H~hnE~l~~~~~l~gi~~~~~~i~~~~~ 419 (420)
T KOG2275|consen 353 EGGKGYPEIGPGST-DSRHIRNEGVPAIGFSPIINTPMLLHDHNEFLNEKVFLRGIEIYYTIIVNLAN 419 (420)
T ss_pred hcCccceeeccccc-ccchhhhcCcchhcccccccccceecchhhhhCchhhhhhhhHHHHHHHhhcC
Confidence 87665555566775 9999999999999999886 34789999999999999999999999998864
No 59
>PRK08554 peptidase; Reviewed
Probab=99.96 E-value=5.8e-28 Score=221.91 Aligned_cols=256 Identities=19% Similarity=0.175 Sum_probs=178.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCCCceeeccceeeEEEEE-------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHV------- 74 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~~~~~~~~g~~~~~v~v------- 74 (295)
+.|++. .++++|.|+|++|||.|+ .+..+++++.......+|++|++||+...+++++++..++++++
T Consensus 116 ~~l~~~--~~~~~i~l~~~~dEE~g~---~~~~~~~~~~~~~~~~~~~~iv~Ept~~~~~~~~~kg~~~~~~~~~~~~~~ 190 (438)
T PRK08554 116 KELSKE--PLNGKVIFAFTGDEEIGG---AMAMHIAEKLREEGKLPKYMINADGIGMKPIIRRRKGFGVTIRVPSEKVKV 190 (438)
T ss_pred HHHHhc--CCCCCEEEEEEcccccCc---cccHHHHHHHHhcCCCCCEEEEeCCCCCcchhhcCCceEEEEEeccccccc
Confidence 345443 367899999999999987 45557776543233467999999999877665444444565554
Q ss_pred Eec--------------CCCcCCCCCCCC--HHHHHHHHHHHHHhhhc---cCCCCCCcccccCCCCCccccceeee-cC
Q 022583 75 TGK--------------LFHSGLPHKAIN--PLELAMEALKVIQTRFY---KDFPPHPKEQVYGFETPSTMKPTQWS-YP 134 (295)
Q Consensus 75 ~G~--------------~~Hs~~p~~g~n--ai~~~~~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~t~~~~~i~-~g 134 (295)
+|+ .+|++.+..|.| ++..+++++.++..... ..+... . ..+..++++.+. .+
T Consensus 191 ~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~------~-~~~~~~~~~~~~p~~ 263 (438)
T PRK08554 191 KGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVLAVSLEGKFLKG------N-VVPGEVTLTYLEPGE 263 (438)
T ss_pred ccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCceEEEEeeeeeec------C-cccceeEEEEecCCC
Confidence 343 499998776655 47778887776653210 000000 0 001111111111 01
Q ss_pred CC-----------------------------------Cccee---CCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhh
Q 022583 135 GG-----------------------------------GINQI---PGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN 176 (295)
Q Consensus 135 g~-----------------------------------~~n~i---P~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~ 176 (295)
|. ..|++ |++|++.+|+|+.| .+.+++.++|++.+++..
T Consensus 264 g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~~-- 340 (438)
T PRK08554 264 GEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFNL-- 340 (438)
T ss_pred CccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhccC--
Confidence 11 45565 89999999999988 688888888887776421
Q ss_pred hhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCC
Q 022583 177 IEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFD 255 (295)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p 255 (295)
| +++++++.....|+..+++++++++.+++++++ .|.++ +...+|+ +|+++++..|+|
T Consensus 341 ---------------~----~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~~~-~g~~~~~~~~~Gg-tDa~~~~~~Gip 399 (438)
T PRK08554 341 ---------------P----EAEVEIRTNEKAGYLFTPPDEEIVKVALRVLKE-LGEDAEPVEGPGA-SDSRYFTPYGVK 399 (438)
T ss_pred ---------------C----CceEEEEeccCCCCcCCCCChHHHHHHHHHHHH-hCCCcEEEecCCc-hHHHHHHhcCCC
Confidence 1 345666655556777788899999999999988 57654 4445666 699999888999
Q ss_pred eEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 256 VQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 256 ~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
++.|||+. .++|++|||+++++|.+++++|.+++.+|.
T Consensus 400 ~v~~Gp~~-~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 400 AIDFGPKG-GNIHGPNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred ceEECCCC-CCCCCCcceEEHHHHHHHHHHHHHHHHHHh
Confidence 99999974 689999999999999999999999998875
No 60
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.96 E-value=5.6e-28 Score=229.12 Aligned_cols=255 Identities=18% Similarity=0.146 Sum_probs=190.6
Q ss_pred ChhhhcccCCCceeEEEEEEeccccC-----CCCCcCHHHH--------HHc----cc-------cccC-----------
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENS-----AITGVGVDAL--------VKD----GL-------LNKL----------- 45 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g-----~~~~~Ga~~l--------~~~----~~-------~~~~----------- 45 (295)
++.|++.+..++++|.|++..+||.+ . .|++.+ ++. +. ..++
T Consensus 282 ~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~---~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~ 358 (591)
T PRK13590 282 VRELHRQGRRLPFGLEVVGFAEEEGQRYKATF---LGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRD 358 (591)
T ss_pred HHHHHHcCCCCCCCeEEEEecCCccccCCccc---cchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccC
Confidence 46788999888999999999999973 3 577753 220 00 0000
Q ss_pred --CCCcEEEe--cCC--------CCCceeeccceeeEEEEEEecCCCcCC-CC-CCCCHHHHHHHHHHHHHhhhccCCCC
Q 022583 46 --KGGPLYWI--DTA--------DKQPCIGTGGMIPWKLHVTGKLFHSGL-PH-KAINPLELAMEALKVIQTRFYKDFPP 111 (295)
Q Consensus 46 --~~d~~i~~--e~~--------~~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~-~g~nai~~~~~~i~~l~~~~~~~~~~ 111 (295)
+++..|=. |++ ...++++++|..+++|+++|+++|+|. |. .+.||+..+++++..+++.... .
T Consensus 359 ~~~~~a~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~--~- 435 (591)
T PRK13590 359 PARYLGFVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ--D- 435 (591)
T ss_pred CCCccEEEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc--C-
Confidence 11122222 433 235778999999999999999999996 53 3689999999999999885321 1
Q ss_pred CCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCccccc
Q 022583 112 HPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (295)
Q Consensus 112 ~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 191 (295)
...+++++.|+.+|+..|+||++|++.+|+|+.++++.+.+.+.+++.+++++..
T Consensus 436 ----------~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~--------------- 490 (591)
T PRK13590 436 ----------GDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICER--------------- 490 (591)
T ss_pred ----------CCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 1246688888744668999999999999999999888888888888888876543
Q ss_pred CCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCeEEEcCCC-CCcCCC
Q 022583 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDVQTAGYGL-MATYHA 269 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~v~~gpg~-~~~~H~ 269 (295)
++++++++.....|+ ...+.++++.+.+++++ .|.+. ...+.|| +|+.++.+.+.++++||||. .+.+|+
T Consensus 491 ----~g~~vei~~~~~~~~--~~~d~~lv~~~~~aa~~-~G~~~~~~~sggg-~Da~~~a~~~p~~mifgpg~~~g~sH~ 562 (591)
T PRK13590 491 ----RGLRYTLEETMRAAA--APSAPAWQQRWEAAVAA-LGLPLFRMPSGAG-HDAMKLHEIMPQAMLFVRGENAGISHN 562 (591)
T ss_pred ----cCCeEEEEEeecCCC--cCCCHHHHHHHHHHHHH-cCCCcccCCcchh-HHHHHHHHHCCEEEEEEeeCCCCCCCC
Confidence 145666665444555 45567799999999877 46543 3345566 58888888766688899985 367899
Q ss_pred CCccccHHHHHHHHHHHHHHHHhhh
Q 022583 270 DNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 270 ~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
+||++++++|..+++++.+++..++
T Consensus 563 p~E~v~~edL~~g~~vl~~ll~~l~ 587 (591)
T PRK13590 563 PLESSTADDMQLAVQAFQHLLDQLA 587 (591)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998876
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.96 E-value=5.3e-28 Score=229.10 Aligned_cols=258 Identities=17% Similarity=0.136 Sum_probs=191.6
Q ss_pred ChhhhcccCCCceeEEEEEEecccc-----CCCCCcCHHHHHH------------ccc-------cccC-----------
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVK------------DGL-------LNKL----------- 45 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~-----g~~~~~Ga~~l~~------------~~~-------~~~~----------- 45 (295)
++.|++.+.+++++|.|+...+||. ++ .|++.+.- +|. ..+.
T Consensus 282 ~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~---~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~ 358 (591)
T PRK13799 282 VKELHEQGERLPFHFEVIAFAEEEGQRFKATF---LGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARD 358 (591)
T ss_pred HHHHHHcCCCCCCCeEEEEecCCCccCCCccc---cchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccC
Confidence 4678999999999999999999997 44 67777751 121 0000
Q ss_pred --CCCcEEEecCC----------CCCceeeccceeeEEEEEEecCCCcCC-C-CCCCCHHHHHHHHHHHHHhhhccCCCC
Q 022583 46 --KGGPLYWIDTA----------DKQPCIGTGGMIPWKLHVTGKLFHSGL-P-HKAINPLELAMEALKVIQTRFYKDFPP 111 (295)
Q Consensus 46 --~~d~~i~~e~~----------~~~~~~~~~g~~~~~v~v~G~~~Hs~~-p-~~g~nai~~~~~~i~~l~~~~~~~~~~ 111 (295)
++++.+=.|-. ...++++++|..+++|+++|+++|+|. | ..+.||+..+++++..+++...+. +
T Consensus 359 ~~~~~a~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~-~- 436 (591)
T PRK13799 359 PADVLGFIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD-Q- 436 (591)
T ss_pred CCCccEEEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc-C-
Confidence 11122222211 224668999999999999999999996 5 458999999999999998864321 1
Q ss_pred CCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCccccc
Q 022583 112 HPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVL 191 (295)
Q Consensus 112 ~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 191 (295)
. ...+++++.|+.+++..|+||++|++.+|+|+.++++.+.+.+++++.++++++.
T Consensus 437 ~---------~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~--------------- 492 (591)
T PRK13799 437 H---------ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAAR--------------- 492 (591)
T ss_pred C---------CCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 0 1246788899843458999999999999999999888888888888888876543
Q ss_pred CCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCC-ceeccCCchhhHhhhhcCCCeEEEcCC-CCCcCCC
Q 022583 192 PDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVN-PYSITGTLPLIRELQDEGFDVQTAGYG-LMATYHA 269 (295)
Q Consensus 192 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~-~~~~~gg~~d~~~~~~~g~p~v~~gpg-~~~~~H~ 269 (295)
+++.++++.....|+. ..+.++++.+.+++++ .|.+. ...+.+| +|+.+|.+.+.+++.|+|+ ..+..|+
T Consensus 493 ----~g~~~ei~~~~~~~~~--~~d~~lv~~~~~a~~~-~G~~~~~~~sgag-~Da~~~a~~~p~amif~~~g~~g~sHs 564 (591)
T PRK13799 493 ----RGIEYKAELAMKAAAA--PCAPELMKQLEAATDA-AGVPLFELASGAG-HDAMKIAEIMDQAMLFTRCGNAGISHN 564 (591)
T ss_pred ----hCCeEEEEEEecCCCc--CCCHHHHHHHHHHHHH-cCCCceecCcchH-HHHHHHHhhCCEEEEEEecCCCCCCCC
Confidence 1355666655555553 4456799999888876 56543 3345566 5898998888888889875 3456899
Q ss_pred CCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 270 DNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 270 ~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
+||++++++|..+++++.+++.+|++
T Consensus 565 p~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 565 PLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999875
No 62
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.96 E-value=1.7e-27 Score=219.21 Aligned_cols=249 Identities=17% Similarity=0.138 Sum_probs=176.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccc--cCCCCc---EEEecC---------------------
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGGP---LYWIDT--------------------- 55 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~--~~~~d~---~i~~e~--------------------- 55 (295)
+.|++.+.+++++|.|+|++|||.|+ .|+++++++.... .+.+|+ ++++++
T Consensus 119 ~~l~~~~~~~~~~i~~~~~~dEE~g~---~g~~~~l~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~ 195 (447)
T TIGR01887 119 KILKELGLKLKKKIRFIFGTDEETGW---ACIDYYFEHEEAPDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLES 195 (447)
T ss_pred HHHHHcCCCCCCcEEEEEECCcccCc---HhHHHHHHhcCCCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEE
Confidence 56777788889999999999999998 7999998763211 112333 454443
Q ss_pred ------CCCC-----ceeecc-------------------cee-----eEEEEEEecCCCcCCCCCCCCHHHHHHHHHHH
Q 022583 56 ------ADKQ-----PCIGTG-------------------GMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALKV 100 (295)
Q Consensus 56 ------~~~~-----~~~~~~-------------------g~~-----~~~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~ 100 (295)
++.. .+++++ |.+ +++|+++|+++|++.|+.|.|||..|++++..
T Consensus 196 ~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~ 275 (447)
T TIGR01887 196 FKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQ 275 (447)
T ss_pred EeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHh
Confidence 2221 245555 777 79999999999999999999999999999999
Q ss_pred HH--hhhccC-------CC-----CCC-cccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHH
Q 022583 101 IQ--TRFYKD-------FP-----PHP-KEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKR 165 (295)
Q Consensus 101 l~--~~~~~~-------~~-----~~~-~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~ 165 (295)
+. +..... .. ... ........+.+|+|++.|+ ++ +|++|++.+|+|+.|+++.++++++
T Consensus 276 l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I~-~g-----~p~~~~~~~d~R~~p~~~~e~~~~~ 349 (447)
T TIGR01887 276 LNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVID-YE-----NAEAGLIGLNVRYPVGNDPDTMLKN 349 (447)
T ss_pred ccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEEE-Ee-----CCcEEEEEEEEecCCCCCHHHHHHH
Confidence 86 211000 00 000 0001111245788999998 55 3899999999999999999987777
Q ss_pred HHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCc-eeccCCch
Q 022583 166 LQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNP-YSITGTLP 244 (295)
Q Consensus 166 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~-~~~~gg~~ 244 (295)
+.+.+.. . ..+.....++|+..++++|+++.+.+++++.+|.++. ....|+ +
T Consensus 350 i~~~~~~-------------------------~-~~~~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~~~~~~gg-t 402 (447)
T TIGR01887 350 ELAKESG-------------------------I-VEVTENGYLKPLYVPKDDPLVQTLMKVYEKQTGDEGTPVAIGGG-T 402 (447)
T ss_pred HHHHhhC-------------------------c-EEEEEccCCCCeEECCCCHHHHHHHHHHHHHhCCCCCeeEecch-h
Confidence 7643221 1 1122222356666788999999999999999887643 445556 4
Q ss_pred hhHhhhhcCCCeEEEcC---CCCCcCCCCCccccHHHHHHHHHHHHHHH
Q 022583 245 LIRELQDEGFDVQTAGY---GLMATYHADNEYCLLSDMCQGYQVFVSII 290 (295)
Q Consensus 245 d~~~~~~~g~p~v~~gp---g~~~~~H~~dE~v~~~~l~~~~~~~~~~l 290 (295)
|++++. +++.||| |...++|++||+|++++|..++++|.+++
T Consensus 403 da~~~~----~~i~~Gp~~pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 403 YARLME----NGVAFGALFPGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred hhhhCC----CcEEeCCCCCCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 887653 3677884 55567999999999999999999998764
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=7.4e-23 Score=176.61 Aligned_cols=272 Identities=22% Similarity=0.337 Sum_probs=208.7
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHcc---ccccCCCCcEEEecCCC---CCce--eeccceeeEEE
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG---LLNKLKGGPLYWIDTAD---KQPC--IGTGGMIPWKL 72 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~---~~~~~~~d~~i~~e~~~---~~~~--~~~~g~~~~~v 72 (295)
+++|++++..++-+|+|+|.+.||.|+ .|...++++. ++.+ .|++.+.+... -.+| +|.+|...+.+
T Consensus 144 v~a~~~~g~~lpvnv~f~~EgmEEsgS---~~L~~l~~~~kD~~~~~--vD~vciSdnyWlg~kkPcltyGlRG~~yf~i 218 (473)
T KOG2276|consen 144 VKALQQLGIDLPVNVVFVFEGMEESGS---EGLDELIEKEKDKFFKD--VDFVCISDNYWLGTKKPCLTYGLRGVIYFQI 218 (473)
T ss_pred HHHHHHhCccccceEEEEEEechhccC---ccHHHHHHHHhhhhhcc--CCEEEeeCceeccCCCcccccccccceeEEE
Confidence 468899999999999999999999999 6888887643 3334 46776666432 2344 78999999999
Q ss_pred EEEe--cCCCcCC-CCCCCCHHHHHHHHHHHHHhhhc--------cCCCCCCcc---------------------c----
Q 022583 73 HVTG--KLFHSGL-PHKAINPLELAMEALKVIQTRFY--------KDFPPHPKE---------------------Q---- 116 (295)
Q Consensus 73 ~v~G--~~~Hs~~-p~~g~nai~~~~~~i~~l~~~~~--------~~~~~~~~~---------------------~---- 116 (295)
+|.| +..||+. .-.-.-|+..+..++..|.+... +.+.|..++ .
T Consensus 219 ~v~g~~~DlHSGvfGG~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~ 298 (473)
T KOG2276|consen 219 EVEGPSKDLHSGVFGGVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPT 298 (473)
T ss_pred EEeecccccccccccchhHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhcccccccccc
Confidence 9999 6789995 33334577777777777654321 223332210 0
Q ss_pred -------ccCCCCCccccceeee---cCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCC
Q 022583 117 -------VYGFETPSTMKPTQWS---YPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPV 186 (295)
Q Consensus 117 -------~~~~~~~~t~~~~~i~---~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 186 (295)
.++|.- .++.+..|+ ++.+...+||.++.-.+.+|+.|.++++.+.+.+.++++...++..
T Consensus 299 ~~k~~~l~~rWry-PSLsihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~n-------- 369 (473)
T KOG2276|consen 299 DDKKRILMHRWRY-PSLSIHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELN-------- 369 (473)
T ss_pred CchHHHhhhhccc-CccceecccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcC--------
Confidence 011222 344556665 2456788999999999999999999999999999999998765421
Q ss_pred cccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCC-chhhHhhhhc-CCCeEEEcCCC-
Q 022583 187 SKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGT-LPLIRELQDE-GFDVQTAGYGL- 263 (295)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg-~~d~~~~~~~-g~p~v~~gpg~- 263 (295)
.| -++++++.....||..+++++-+.++++|+++++|.++.+...|| .+..+-|+.. |.+++.++.|.
T Consensus 370 ----S~-----N~l~~~~~~~~~~Wv~d~~~~~y~a~krA~~~v~gvePd~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~ 440 (473)
T KOG2276|consen 370 ----SP-----NKLKVSMGHAGAPWVSDPDDPHYLALKRAIETVYGVEPDFTREGGSIPVTLTFQDITGKSVLLLPYGAS 440 (473)
T ss_pred ----CC-----CceEEeecCCCCceecCCCchhHHHHHHHHHHhhCCCCCccccCCccceehHHHHHhCCCeEEeccccc
Confidence 22 367888888889999999999999999999999999888877664 4667778874 99999888885
Q ss_pred CCcCCCCCccccHHHHHHHHHHHHHHHHhhhC
Q 022583 264 MATYHADNEYCLLSDMCQGYQVFVSIISQLED 295 (295)
Q Consensus 264 ~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~~ 295 (295)
++++|+.||++++.++.++++++..++.+++.
T Consensus 441 dD~aHsqNEkl~i~N~~~G~k~l~ay~~el~~ 472 (473)
T KOG2276|consen 441 DDGAHSQNEKLNITNYVEGTKVLAAYISELAQ 472 (473)
T ss_pred ccchhhhcccccHHHHhhhHHHHHHHHHHHhc
Confidence 78999999999999999999999999998863
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-20 Score=168.48 Aligned_cols=246 Identities=16% Similarity=0.114 Sum_probs=197.1
Q ss_pred CCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC-CCceeeccceeeEEEEEEecCCCcCC-CCC
Q 022583 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFHSGL-PHK 86 (295)
Q Consensus 9 ~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~-~~~~~~~~g~~~~~v~v~G~~~Hs~~-p~~ 86 (295)
.-++++|.+.|+++||.|+ .|+.++.-. .+.+|+.+..+++. +.+.+...+...+++++.|+..|++. +..
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~---rg~~~~~~a----~f~a~~ay~iDGg~~g~i~~ea~~~~~~~~~~~g~~~h~~~a~~~ 237 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGG---RGAANKDVA----RFLADFAYTLDGGPVGEIPREAFNAAAVRATIVGPNVHPGSAKGK 237 (414)
T ss_pred cccccCeEEEecchHHhhh---hhhhhccHH----hhhcceeEecCCCccCeeeeeccchheeeeeeeccCcCccchHHH
Confidence 4578999999999999998 788777543 23467788887543 56778888899999999999999996 777
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHH
Q 022583 87 AINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRL 166 (295)
Q Consensus 87 g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i 166 (295)
.+||+..+.+++..+... ..+. .++...+..+ +++..|.|.+++.+...+|..........++.+
T Consensus 238 ~i~a~~~a~e~~~~~~~~---~~~e-----------~t~~~~Gv~~-~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~ 302 (414)
T COG2195 238 MINALLLAAEFILELPLE---EVPE-----------LTEGPEGVYH-LGDSTNSVEETSLNLAIIRDFDNLLFRARKDSM 302 (414)
T ss_pred HhhHHHhhhhhhhcCCcc---cccc-----------cccccceEEe-ccccccchhhhhhhhhhhhhcchhHHHHhHHHH
Confidence 899999888888876643 2221 2566777777 889999999999999999999876666677777
Q ss_pred HHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCCCceeccCCchhh
Q 022583 167 QEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHVNPYSITGTLPLI 246 (295)
Q Consensus 167 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~gg~~d~ 246 (295)
++.+.+..++.. ....+++++...||+|..+++++++..+++++++++.++......||+ |+
T Consensus 303 ~~~~~~~~~~~g-----------------~~~~~~~~~~~~Yp~~~~~~~~~iv~~a~~a~~~l~~~p~v~~i~gGt-d~ 364 (414)
T COG2195 303 KDVVEEMAASLG-----------------KLAGAELEVKDSYPGWKIKPDSPLVDLAKKAYKELGIKPKVKPIHGGT-DG 364 (414)
T ss_pred HHHHHHHHHHhh-----------------hccceEEEEeccccCcCCCCCchHHHHHHHHHHHhCCCceEEEeeccc-ch
Confidence 777776655421 015677788889999999999999999999999998775555678886 77
Q ss_pred HhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhhh
Q 022583 247 RELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQLE 294 (295)
Q Consensus 247 ~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~~ 294 (295)
..+..+|+|+..++.|...+.|+++|+|+++++.+.++++..++..++
T Consensus 365 ~~is~~g~p~~~i~~Gp~~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 365 GVLSFKGLPTPNISTGPGENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred hhhhccCCCCceEecccccCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 778888888876665545789999999999999999999999998765
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.76 E-value=4.1e-18 Score=127.39 Aligned_cols=109 Identities=27% Similarity=0.375 Sum_probs=92.4
Q ss_pred eeccceeeEEEEEEecCCCcCCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcccccCCCCCccccceeeecCCCCccee
Q 022583 62 IGTGGMIPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQI 141 (295)
Q Consensus 62 ~~~~g~~~~~v~v~G~~~Hs~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~i 141 (295)
++++|..+++|+++|+++|+|.|+.|+||+..|++++.+|++...+.... ....+.++.+++++.|+ +|...|+|
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~----~~~~~~~~~~~~~~~i~-gG~~~n~i 75 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFR----PEEFFPGPPTLNIGSIE-GGTAPNVI 75 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTST----HHHCTCTSEEEEEEEEE-EESSTTEE
T ss_pred CcCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccc----cccccccccceeEeecc-cCCcCCEE
Confidence 57899999999999999999999999999999999999999863321100 00112245899999998 89999999
Q ss_pred CCeeEEEEEEEeCCCCChHHHHHHHHHHHHHhhh
Q 022583 142 PGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (295)
Q Consensus 142 P~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~ 175 (295)
|++|++.+++|+.|+++.+++++++++.+++..+
T Consensus 76 p~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~~~~ 109 (111)
T PF07687_consen 76 PDEATLTVDIRYPPGEDLEEIKAEIEAAVEKIAK 109 (111)
T ss_dssp SSEEEEEEEEEESTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCcchHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999988654
No 66
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.50 E-value=6.2e-14 Score=114.61 Aligned_cols=75 Identities=23% Similarity=0.322 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHhCCC-CceeccCCchhhHhhh---hcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHV-NPYSITGTLPLIRELQ---DEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIIS 291 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~-~~~~~~gg~~d~~~~~---~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~ 291 (295)
+.++++.+.+++++.++.+ ....+.+++ |+.++. ..++|++.|||+. .++|++||+++++++.+++++|.++|.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t-D~~~~~~~~~~~~~~i~~G~~~-~~~H~~~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 111 DPPLVQALQAAAQEVGGEPPEPVASGGGT-DAGFLAEVKGLGIPAIGFGPGG-SNAHTPDEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp CHHHHHHHHHHHHHTTSSEEEEEEESSSS-THHHHHCHHHTTEEEEEEESCE-ESTTSTT-EEEHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhccccccceeccc-cchhhhhhhccccceeeeCCCC-CCCCCCCcEecHHHHHHHHHHHHHHHh
Confidence 4458999999999987633 444566674 888888 5799999999995 899999999999999999999999987
Q ss_pred h
Q 022583 292 Q 292 (295)
Q Consensus 292 ~ 292 (295)
+
T Consensus 189 n 189 (189)
T PF01546_consen 189 N 189 (189)
T ss_dssp T
T ss_pred C
Confidence 4
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.67 E-value=8.1e-08 Score=85.07 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=108.7
Q ss_pred CCCceeEEEEEEeccccCCCCCcCHHHHHHcc--ccc--cCCCCcEEEecCCC-------C-CceeeccceeeEEEEEEe
Q 022583 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDG--LLN--KLKGGPLYWIDTAD-------K-QPCIGTGGMIPWKLHVTG 76 (295)
Q Consensus 9 ~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~--~~~--~~~~d~~i~~e~~~-------~-~~~~~~~g~~~~~v~v~G 76 (295)
....|||.|+.++|||.-+ .|++..+... +.+ +++.-++|+.+++. + -+++|..|.+..-+-|.|
T Consensus 159 ~~~~GNlLf~a~pdEE~~s---~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG 235 (553)
T COG4187 159 TDRQGNLLFMAVPDEEVES---RGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVG 235 (553)
T ss_pred CCCCCcEEEEeccchhhhc---ccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEe
Confidence 4678999999999999988 8998877643 222 23334566666542 1 267899999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHhh--hccCCCCCCcccccCCCCCccccceeeecCCCCcce-eCCeeEEEEEEEe
Q 022583 77 KLFHSGLPHKAINPLELAMEALKVIQTR--FYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQ-IPGECTVSGDVRL 153 (295)
Q Consensus 77 ~~~Hs~~p~~g~nai~~~~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~t~~~~~i~~gg~~~n~-iP~~~~~~~~~R~ 153 (295)
...|+|.|..|+||-..+++++.+|+-. ..++.. +.-..+|+.+. . +.--+..|| .|.++.+.++.-+
T Consensus 236 ~etHvG~~f~Gvnan~maSei~~~le~N~~l~dr~~------Ge~t~PPs~L~--q-kDlKe~Y~VqTp~~a~~~fN~l~ 306 (553)
T COG4187 236 CETHVGYPFEGVNANFMASEITRRLELNADLADRVD------GEITPPPSCLE--Q-KDLKESYNVQTPERAWLYFNWLY 306 (553)
T ss_pred eccccCCcccCCCHHHHHHHHHHHhhcChhhhhhhC------CeeCCCcHhhh--h-hhhhhhccccCcchhhhhheehh
Confidence 9999999999999999999999998742 112211 01111233221 1 112456776 7899999999966
Q ss_pred CCCCChHHHHHHHHHHHHHhh
Q 022583 154 TPFYNVTDVMKRLQEYVDDIN 174 (295)
Q Consensus 154 ~~~~~~~~~~~~i~~~i~~~~ 174 (295)
. +.+..++.+.+++..++++
T Consensus 307 h-~~ta~~~~d~l~~~a~~A~ 326 (553)
T COG4187 307 H-SRTAKELFDRLKEEAETAA 326 (553)
T ss_pred h-cCCHHHHHHHHHHHHHHHH
Confidence 6 6788888888887776554
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=97.75 E-value=8.2e-05 Score=66.53 Aligned_cols=75 Identities=15% Similarity=0.060 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCce--eccCCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHVNPY--SITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIIS 291 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~~~~--~~~gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~ 291 (295)
+.++++.+.+++++. +.+... ...+| +|+..++. .|+|++.+||+. -.+|+++|+++++++..+++++.+++.
T Consensus 255 ~~~l~~~l~~~A~~~-~Ip~Q~~~~~ggG-TDa~~~~~~~~Giptv~ig~p~-ry~Hs~~E~v~~~D~~~~~~Ll~~~i~ 331 (344)
T PRK09961 255 PPKLTAWIETVAAEI-GIPLQADMFSNGG-TDGGAVHLTGTGVPTVVMGPAT-RHGHCAASIADCRDILQMIQLLSALIQ 331 (344)
T ss_pred CHHHHHHHHHHHHHc-CCCcEEEecCCCc-chHHHHHHhCCCCCEEEechhh-hcccChhheEEHHHHHHHHHHHHHHHH
Confidence 456888888888775 444333 23345 47876654 799999999984 489999999999999999999999986
Q ss_pred hh
Q 022583 292 QL 293 (295)
Q Consensus 292 ~~ 293 (295)
.+
T Consensus 332 ~l 333 (344)
T PRK09961 332 RL 333 (344)
T ss_pred Hc
Confidence 65
No 69
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=97.16 E-value=0.0015 Score=58.46 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHhCCCCce-eccCCchhhH--hhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 217 SRGFHVLCKATEEVVGHVNPY-SITGTLPLIR--ELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 217 ~~~~~~~~~a~~~~~g~~~~~-~~~gg~~d~~--~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
-.+.+.+.++.++. +-+..+ .+.|| +|+. .+...|+|++.+|.+ .-..|++.|.++++|+..+++++.+++..+
T Consensus 265 ~~l~~~l~~~A~~~-~I~~Q~~~~~gG-tDa~~~~~~~~Gvpt~~i~ip-~Ry~Hs~~e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 265 PRMKDFLLTTAEEA-GIKYQYYVAKGG-TDAGAAHLKNSGVPSTTIGVC-ARYIHSHQTLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHHHHHHc-CCCcEEecCCCC-chHHHHHHhCCCCcEEEEccC-cccccChhheeeHHHHHHHHHHHHHHHHhc
Confidence 34677777777664 544333 34456 4787 444579999999976 467899999999999999999999999876
Q ss_pred h
Q 022583 294 E 294 (295)
Q Consensus 294 ~ 294 (295)
.
T Consensus 342 ~ 342 (350)
T TIGR03107 342 D 342 (350)
T ss_pred C
Confidence 3
No 70
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=96.08 E-value=0.022 Score=50.84 Aligned_cols=73 Identities=15% Similarity=0.085 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhCCCCc-eecc-CCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHhh
Q 022583 218 RGFHVLCKATEEVVGHVNP-YSIT-GTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQL 293 (295)
Q Consensus 218 ~~~~~~~~a~~~~~g~~~~-~~~~-gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~~ 293 (295)
.+.+.+.++.++. +-+.. .... +| +|+..++. .|+|+..+|++ .-..|++.|.+.++++..+.+++..++..+
T Consensus 270 ~l~~~L~~~A~~~-~Ip~Q~~v~~~gg-TDA~a~~~~g~gvpta~Igip-~ry~Hs~~e~~~~~D~~~~~~Ll~~~i~~~ 346 (355)
T COG1363 270 KLRKFLLELAEKN-NIPYQVDVSPGGG-TDAGAAHLTGGGVPTALIGIP-TRYIHSPVEVAHLDDLEATVKLLVAYLESL 346 (355)
T ss_pred HHHHHHHHHHHHc-CCCeEEEecCCCC-ccHHHHHHcCCCCceEEEecc-cccccCcceeecHHHHHHHHHHHHHHHHhc
Confidence 3667777777664 44422 2333 45 57776664 57999999987 467899999999999999999999999875
No 71
>PRK09864 putative peptidase; Provisional
Probab=95.50 E-value=0.068 Score=47.97 Aligned_cols=74 Identities=12% Similarity=0.018 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHhCCCCce-e-ccCCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHHh
Q 022583 217 SRGFHVLCKATEEVVGHVNPY-S-ITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIISQ 292 (295)
Q Consensus 217 ~~~~~~~~~a~~~~~g~~~~~-~-~~gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~~ 292 (295)
-.+.+.+.++.++. +-+..+ . ..||| |+..++. .|+|++.++.- .-..|++.|-++++|+..+++++..++.+
T Consensus 264 ~~l~~~l~~~A~~~-~Ip~Q~~~~~~ggT-Da~~i~~~~~Gvpt~~isiP-~RY~Hs~~e~~~~~D~e~~~~Ll~~~~~~ 340 (356)
T PRK09864 264 QKLVAALKSCAAHN-DLPLQFSTMKTGAT-DGGRYNVMGGGRPVVALCLP-TRYLHANSGMISKADYDALLTLIRDFLTT 340 (356)
T ss_pred HHHHHHHHHHHHHc-CCCceEEEcCCCCc-hHHHHHHhCCCCcEEEEeec-cCcCCCcceEeEHHHHHHHHHHHHHHHHh
Confidence 34677777777664 544333 2 33564 7766654 68999988743 23689999999999999999999999977
Q ss_pred h
Q 022583 293 L 293 (295)
Q Consensus 293 ~ 293 (295)
+
T Consensus 341 l 341 (356)
T PRK09864 341 L 341 (356)
T ss_pred c
Confidence 6
No 72
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=93.87 E-value=0.24 Score=44.36 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCce--eccCCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHVNPY--SITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSIIS 291 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~~~~--~~~gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~l~ 291 (295)
+..+++.+.+++++. +-+..+ ...+|| |+..++. .|+|+..+++. .-..|+ -|.++++++..+++++..++.
T Consensus 265 ~~~l~~~l~~~A~~~-~Ip~Q~~~~~~~gt-Da~~~~~~~~Gi~t~~i~iP-~Ry~Hs-~e~~~~~D~~~~~~Ll~~~~~ 340 (343)
T TIGR03106 265 DYHLTRKLIRLCQDH-GIPHRRDVFRYYRS-DAASAVEAGHDIRTALVTFG-LDASHG-YERTHIDALEALANLLVAYAQ 340 (343)
T ss_pred CHHHHHHHHHHHHHc-CCCcEEEecCCCCC-hHHHHHHcCCCCCEEEeecc-ccchhh-hhhccHHHHHHHHHHHHHHhc
Confidence 345777888887764 544333 233564 6766654 68999999976 457899 999999999999999999873
No 73
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=93.37 E-value=0.023 Score=45.68 Aligned_cols=51 Identities=27% Similarity=0.257 Sum_probs=37.1
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~ 55 (295)
|.|++.+.+++.+|+|+|..+||.|. .|+++++++......+..++|+.|.
T Consensus 39 r~l~~~~~~~~~~i~fv~~~~EE~gl---~GS~~~~~~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 39 RVLKELKPQPKRTIRFVFFDGEEQGL---LGSRAFVEHDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHHHSTHSSSEEEEEEEESSGGGTS---HHHHHHHHHHHCHHHHEEEEEEECS
T ss_pred HHHHHhhcccCccEEEEEecccccCc---cchHHHHHhhhcccccceeEEeccc
Confidence 56777677889999999999999998 8999999732111122345666654
No 74
>PRK09864 putative peptidase; Provisional
Probab=92.42 E-value=0.13 Score=46.17 Aligned_cols=46 Identities=22% Similarity=0.127 Sum_probs=35.9
Q ss_pred hhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC
Q 022583 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (295)
Q Consensus 3 ~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (295)
+|++.+. +..+|+++|++.||+|. .||+..... ++||.+|+.|.+.
T Consensus 186 ~l~~l~~-~~~~vy~v~TvQEEvGl---rGA~~aa~~-----i~PDiaIavDvt~ 231 (356)
T PRK09864 186 LLQTVNN-PEITLYGVGSVEEEVGL---RGAQTSAEH-----IKPDVVIVLDTAV 231 (356)
T ss_pred HHHHhhc-CCCeEEEEEEcchhcch---HHHHHHHhc-----CCCCEEEEEeccc
Confidence 3444432 77899999999999998 899887643 5689999998764
No 75
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=92.28 E-value=0.26 Score=43.07 Aligned_cols=66 Identities=17% Similarity=0.060 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHhCCCCc--eeccCCchhhHhhhh--cCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHH
Q 022583 217 SRGFHVLCKATEEVVGHVNP--YSITGTLPLIRELQD--EGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQV 285 (295)
Q Consensus 217 ~~~~~~~~~a~~~~~g~~~~--~~~~gg~~d~~~~~~--~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~ 285 (295)
..+.+.+.+++++. +-+.. ....++ +|+..++. .|+|++.++.. .-..|++.|.++++++..++++
T Consensus 223 ~~l~~~l~~~A~~~-~Ip~Q~~~~~~gg-TDa~~~~~~~~Gi~t~~i~iP-~ry~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 223 PKLVDKLREIAEEN-GIPYQREVFSGGG-TDAGAIQLSGGGIPTAVISIP-CRYMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp HHHHHHHHHHHHHT-T--EEEEEESSSS-STHHHHHTSTTSSEEEEEEEE-EBSTTSTTEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCeEEEecCCcc-cHHHHHHHcCCCCCEEEEecc-cccCCCcceEEEHHHHHHHhhC
Confidence 35777888877764 54432 334555 58888875 48999998854 3578999999999999988764
No 76
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=92.21 E-value=0.16 Score=45.59 Aligned_cols=41 Identities=20% Similarity=0.209 Sum_probs=33.5
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCCC
Q 022583 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (295)
Q Consensus 10 ~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~~ 58 (295)
+++.+|+++|++.||+|. .||+..... ++||.+|+.|.+..
T Consensus 197 ~~~~~l~~~~tvqEEvG~---rGA~~aa~~-----i~pD~aI~vDv~~~ 237 (350)
T TIGR03107 197 ELPNTLIAGANVQEEVGL---RGAHVSTTK-----FNPDIFFAVDCSPA 237 (350)
T ss_pred CCCceEEEEEEChhhcCc---hhhhhHHhh-----CCCCEEEEEecCCc
Confidence 467899999999999998 899876532 57899999987653
No 77
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=92.09 E-value=0.75 Score=43.00 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCce-----eccCCchhhHhhh-hcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHVNPY-----SITGTLPLIRELQ-DEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSI 289 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~~~~-----~~~gg~~d~~~~~-~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~ 289 (295)
+..++..+++.+++. +-+... .+++|+|-+.+.. +.|+|++.+|.- .-.+|++.|-+..+|+..+++++..+
T Consensus 374 d~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP-~l~MHS~rE~~~~~D~~~~~~l~~af 451 (465)
T PTZ00371 374 NGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIP-QLAMHSIREMCGVVDIYYLVKLIKAF 451 (465)
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechh-hcccccHHHHccHHHHHHHHHHHHHH
Confidence 455777887777664 544211 1233544555555 479999999965 34679999999999999999999999
Q ss_pred HHhhh
Q 022583 290 ISQLE 294 (295)
Q Consensus 290 l~~~~ 294 (295)
+..|.
T Consensus 452 ~~~~~ 456 (465)
T PTZ00371 452 FTNYS 456 (465)
T ss_pred HHhhh
Confidence 87663
No 78
>PRK02256 putative aminopeptidase 1; Provisional
Probab=91.98 E-value=0.41 Score=44.58 Aligned_cols=75 Identities=13% Similarity=0.194 Sum_probs=55.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCCce--e----c-cCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHH
Q 022583 215 LDSRGFHVLCKATEEVVGHVNPY--S----I-TGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFV 287 (295)
Q Consensus 215 ~~~~~~~~~~~a~~~~~g~~~~~--~----~-~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~ 287 (295)
.+..++..+.+.+++. +-+... . + .||| ++..+.+.|+|++.+|.- .-.+|++-|-+..+|+..+++++.
T Consensus 380 ~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgT-ig~~~s~~Gi~tvdiGiP-~l~MHS~rE~~~~~D~~~~~~ll~ 456 (462)
T PRK02256 380 ANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGT-IAKFLANYGMEVIDCGVA-LLSMHSPFEIASKADIYETYKAYK 456 (462)
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcCh-HHHHHcCCCCcEEEechh-hhccccHHHHhhHHHHHHHHHHHH
Confidence 3555777787777664 544222 2 2 3564 777777789999999965 346799999999999999999999
Q ss_pred HHHHh
Q 022583 288 SIISQ 292 (295)
Q Consensus 288 ~~l~~ 292 (295)
.++..
T Consensus 457 ~f~~~ 461 (462)
T PRK02256 457 AFLEE 461 (462)
T ss_pred HHHhh
Confidence 88753
No 79
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=91.72 E-value=0.15 Score=45.66 Aligned_cols=42 Identities=19% Similarity=0.152 Sum_probs=34.7
Q ss_pred cCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC
Q 022583 8 KLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (295)
Q Consensus 8 ~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (295)
+..++.+++|+|++.||+|. .||+.... .++||.+|..+.+.
T Consensus 197 ~~~~~~~vy~v~tvqEEVGl---rGA~~~a~-----~i~pd~aiavd~~~ 238 (355)
T COG1363 197 GIELPADVYFVASVQEEVGL---RGAKTSAF-----RIKPDIAIAVDVTP 238 (355)
T ss_pred cCCCCceEEEEEecchhhcc---chhhcccc-----ccCCCEEEEEeccc
Confidence 46789999999999999998 79877763 35789999888654
No 80
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=91.13 E-value=0.16 Score=44.51 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=30.5
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCC
Q 022583 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (295)
Q Consensus 10 ~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~ 56 (295)
.+..+|+|+|++.||.|. .||+....+ ++||++|+.|.+
T Consensus 153 ~~~~~v~~v~tvqEEvG~---rGA~~aa~~-----i~PD~ai~vD~~ 191 (292)
T PF05343_consen 153 ELDVDVYFVFTVQEEVGL---RGAKTAAFR-----IKPDIAIAVDVT 191 (292)
T ss_dssp S-SSEEEEEEESSCTTTS---HHHHHHHHH-----H-CSEEEEEEEE
T ss_pred CCCceEEEEEEeeeeecC---cceeecccc-----cCCCEEEEEeee
Confidence 355999999999999998 899988754 467889887643
No 81
>PRK09961 exoaminopeptidase; Provisional
Probab=90.21 E-value=0.33 Score=43.52 Aligned_cols=40 Identities=25% Similarity=0.170 Sum_probs=33.1
Q ss_pred CCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCCC
Q 022583 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (295)
Q Consensus 10 ~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~~ 57 (295)
++..+|+++|+..||+|. .||+..... ++||++|+.|.+.
T Consensus 185 ~~~~~v~~~~tvqEEvG~---rGa~~aa~~-----i~pd~~I~vDv~~ 224 (344)
T PRK09961 185 ELPAEVWLVASSSEEVGL---RGGQTATRA-----VSPDVAIVLDTAC 224 (344)
T ss_pred CCCceEEEEEEcccccch---HHHHHHHhc-----cCCCEEEEEeccC
Confidence 467899999999999998 799887643 5689999988664
No 82
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=88.70 E-value=0.36 Score=43.11 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=27.6
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHcc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~ 40 (295)
+.|++. .++.+|.|+++++||.|. .|+++++++.
T Consensus 156 r~l~~~--~~~~~I~fv~~~~EE~Gl---~GS~~~~~~~ 189 (346)
T PRK10199 156 ERLKNV--PTEYGIRFVATSGEEEGK---LGAENLLKRM 189 (346)
T ss_pred HHHhhC--CCCCcEEEEEECCcccCc---HHHHHHHHhc
Confidence 445543 467899999999999998 8999999864
No 83
>PRK02813 putative aminopeptidase 2; Provisional
Probab=88.14 E-value=1.2 Score=41.21 Aligned_cols=74 Identities=15% Similarity=0.099 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHhCCCC-ceec----cCCchhhHhhh-hcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHVN-PYSI----TGTLPLIRELQ-DEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSI 289 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~~-~~~~----~gg~~d~~~~~-~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~ 289 (295)
+......+++++++. +-+. .+.. ++|+|-+.+.. +.|+|++.+|.- .-.+|++-|-+..+|+..+++++..|
T Consensus 347 ~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP-~l~MHS~~E~~~~~D~~~~~~l~~~f 424 (428)
T PRK02813 347 DAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAP-MLAMHSARELAGVKDHAYLIKALTAF 424 (428)
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChh-hcccccHHHHccHHHHHHHHHHHHHH
Confidence 445677777777664 5442 2222 25655555554 479999999965 34679999999999999999999988
Q ss_pred HH
Q 022583 290 IS 291 (295)
Q Consensus 290 l~ 291 (295)
+.
T Consensus 425 ~~ 426 (428)
T PRK02813 425 FS 426 (428)
T ss_pred hc
Confidence 64
No 84
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=80.45 E-value=1 Score=40.32 Aligned_cols=26 Identities=27% Similarity=0.370 Sum_probs=21.5
Q ss_pred hhhhcccCCCceeEEEEEEeccccCC
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSA 27 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~ 27 (295)
+.|++.+..++.+|.++|+++||.|+
T Consensus 196 ~~l~~~~~~~~~~v~~~~t~qEEvG~ 221 (343)
T TIGR03106 196 KAIVEHKVPLPVDVHPLFTITEEVGS 221 (343)
T ss_pred HHHHhcCCCCCceEEEEEECCcccCc
Confidence 45666666688999999999999994
No 85
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=75.58 E-value=8.3 Score=35.22 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCc-e-----eccCCchhhHhhhhcCCCeEEEcCCCCCcCCCCCccccHHHHHHHHHHHHHH
Q 022583 216 DSRGFHVLCKATEEVVGHVNP-Y-----SITGTLPLIRELQDEGFDVQTAGYGLMATYHADNEYCLLSDMCQGYQVFVSI 289 (295)
Q Consensus 216 ~~~~~~~~~~a~~~~~g~~~~-~-----~~~gg~~d~~~~~~~g~p~v~~gpg~~~~~H~~dE~v~~~~l~~~~~~~~~~ 289 (295)
++..+..+++++++. |.++. + ...|||.-.....+.|++++-+|+- .-.+|++-|-....|+....+.|..|
T Consensus 355 d~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDiG~~-~LsMHS~rE~~g~~D~~~~~~~~~aF 432 (437)
T COG1362 355 DSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDIGPA-LLSMHSIRELSGSADLYEAYKALSAF 432 (437)
T ss_pred CchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceeecchh-hhhhccHHHHcchhHHHHHHHHHHHH
Confidence 666788888888774 54321 1 1234442333345679999999975 34679999999999999999999998
Q ss_pred HHh
Q 022583 290 ISQ 292 (295)
Q Consensus 290 l~~ 292 (295)
+.+
T Consensus 433 f~~ 435 (437)
T COG1362 433 FEN 435 (437)
T ss_pred Hhc
Confidence 864
No 86
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=66.59 E-value=3.6 Score=40.83 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=39.5
Q ss_pred ChhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccccccCCCCcEEEecCC
Q 022583 1 MRKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (295)
Q Consensus 1 ~~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~~~~~~~d~~i~~e~~ 56 (295)
+|++.+....+..+|+|+|...||.+. .|+...+.++.+.+ ...++|+.|.+
T Consensus 175 lRv~s~~~~~l~~~vVFLfNgaEE~~L---~gsH~FItQH~w~~-~~ka~INLea~ 226 (834)
T KOG2194|consen 175 LRVLSKSDKLLTHSVVFLFNGAEESGL---LGSHAFITQHPWSK-NIKAVINLEAA 226 (834)
T ss_pred HHHhhcCCCcccccEEEEecCcccchh---hhcccceecChhhh-hhheEEecccc
Confidence 356677777789999999999999997 89999998765543 23467776643
No 87
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M18, (clan MH). The proteins have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal aminoacid, usually neutral or hydrophobic, from a polypeptide []. The type example is aminopeptidase I from Saccharomyces cerevisiae (Baker's yeast), the sequence of which has been deduced, and the mature protein shown to consist of 469 amino acids []. A 45-residue presequence contains both positively- and negatively-charged and hydrophobic residues, which could be arranged in an N-terminal amphiphilic alpha-helix []. The presequence differs from signal sequences that direct proteins across bacterial plasma membranes and endoplasmic reticulum or into mitochondria. It is unclear how this unique presequence targets aminopeptidase I to yeast vacuoles, and how this sorting utilises classical protein secretory pathways [].; GO: 0004177 aminopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1Y7E_A 2GLJ_R 4DYO_A 2IJZ_B 3VAT_A 3VAR_A 2GLF_B.
Probab=60.14 E-value=33 Score=31.85 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=51.7
Q ss_pred ceeEEEEeccCCCccccCCCCHHHHHHHHHHHHHhCCC-Cce----eccCCchhhHhhh-hcCCCeEEEcCCCCCcCCCC
Q 022583 197 RGSLTLTFDEATNGVACNLDSRGFHVLCKATEEVVGHV-NPY----SITGTLPLIRELQ-DEGFDVQTAGYGLMATYHAD 270 (295)
Q Consensus 197 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a~~~~~g~~-~~~----~~~gg~~d~~~~~-~~g~p~v~~gpg~~~~~H~~ 270 (295)
+.++.++.....- + .-+......+++.+++. +.+ ..+ ...+|.+-+..+. +.|+++|-+|.- .-.+|++
T Consensus 338 ~~G~viK~~a~q~-y--atd~~~~a~~~~i~~~~-~ip~Q~f~~r~d~~~GsTiGpi~sa~~gi~tvDiG~P-~LsMHS~ 412 (432)
T PF02127_consen 338 NKGPVIKKNANQR-Y--ATDAASAAVFREICEKA-GIPWQEFVNRSDDPGGSTIGPILSARLGIRTVDIGIP-QLSMHSI 412 (432)
T ss_dssp TS-EEEESETTTT-S--SS-HHHHHHHHHHHHHH-H--EEEEESSSTSSS--HHHHHHHHCCTSEEEEEE-E-EESTTSS
T ss_pred CcccEEEEeCCCC-c--ccCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCCccHHHHHHHhcCCCEEEechh-hhhcccH
Confidence 3455565543211 1 22334455566666554 333 111 1233334565554 589999999965 3457999
Q ss_pred CccccHHHHHHHHHHHHHH
Q 022583 271 NEYCLLSDMCQGYQVFVSI 289 (295)
Q Consensus 271 dE~v~~~~l~~~~~~~~~~ 289 (295)
-|-....|+...++++..|
T Consensus 413 rE~~g~~D~~~~~~~~~aF 431 (432)
T PF02127_consen 413 RETAGKKDIYYLYKAFKAF 431 (432)
T ss_dssp SEEEEHHHHHHHHHHHHHH
T ss_pred HHHhccccHHHHHHHHHHh
Confidence 9999999999999999876
No 88
>PHA02448 hypothetical protein
Probab=54.86 E-value=53 Score=24.75 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=27.9
Q ss_pred CCCceeeccceeeEEEEEEecC--CCc-CCCCCCCCHHHHH
Q 022583 57 DKQPCIGTGGMIPWKLHVTGKL--FHS-GLPHKAINPLELA 94 (295)
Q Consensus 57 ~~~~~~~~~g~~~~~v~v~G~~--~Hs-~~p~~g~nai~~~ 94 (295)
.+.+.+-+.|.+|+++++.|.. +.+ +....|.||+..+
T Consensus 60 ~glp~~d~~gglwirlt~~g~tr~gygd~~gk~gpnavkea 100 (192)
T PHA02448 60 NGLPLLDEHGGLWIRLTLCGVTRIGYGDAGGKKGPNAVKEA 100 (192)
T ss_pred CCCcccccCCCeEEEEEEeccceeeccccCCCcCchHHHHH
Confidence 3456678899999999999864 333 3456789998765
No 89
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=49.76 E-value=15 Score=33.98 Aligned_cols=35 Identities=34% Similarity=0.289 Sum_probs=29.3
Q ss_pred hhhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccc
Q 022583 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL 41 (295)
Q Consensus 2 ~~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~ 41 (295)
|.|++. .++.+|.|++...||.|. .|+.+++.+..
T Consensus 241 r~l~~~--~p~~~v~f~~~~aEE~Gl---~GS~~~~~~~~ 275 (435)
T COG2234 241 RVLKGN--PPKRTVRFVAFGAEESGL---LGSEAYVKRLS 275 (435)
T ss_pred HHHhcC--CCCceEEEEEecchhhcc---cccHHHHhcCC
Confidence 455544 388999999999999998 89999998765
No 90
>PRK06156 hypothetical protein; Provisional
Probab=45.65 E-value=2.8e+02 Score=26.45 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=29.1
Q ss_pred ccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHH
Q 022583 124 STMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDD 172 (295)
Q Consensus 124 ~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~ 172 (295)
.+.++..++ ||...|+||+.|.+.+. ..+ .+.+...+.+..+.
T Consensus 239 ~~~~l~~~~-gG~~~n~ip~~a~~~~~--~~~---~~~~~~~~~~~~~~ 281 (520)
T PRK06156 239 KGAEIVAMT-GGAFANQIPQTAVATLS--GGD---PAALAAALQAAAAA 281 (520)
T ss_pred CceeEEEEE-cCCcCCCCCCccEEEEe--cCC---HHHHHHHHHHHHHH
Confidence 455778898 99999999999998844 333 34444455544443
No 91
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=45.34 E-value=37 Score=32.05 Aligned_cols=42 Identities=7% Similarity=-0.077 Sum_probs=31.4
Q ss_pred ccccceeeecCCCCcceeCCeeEEEEEEEeCCCCChHHHHHHHHHHHHH
Q 022583 124 STMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDD 172 (295)
Q Consensus 124 ~t~~~~~i~~gg~~~n~iP~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~ 172 (295)
++.|++.++ .--+.|++.+++|++++.+.+++.+.++...+.
T Consensus 344 ~S~Nlg~v~-------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~ 385 (485)
T PRK15026 344 TSLNVGVVT-------MTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKL 385 (485)
T ss_pred eeeEEEEEE-------EeCCEEEEEEEecCCCchHHHHHHHHHHHHHHH
Confidence 445555554 344689999999999988888888888777553
No 92
>PRK02813 putative aminopeptidase 2; Provisional
Probab=40.81 E-value=25 Score=32.67 Aligned_cols=45 Identities=24% Similarity=0.231 Sum_probs=28.7
Q ss_pred ceeEEEEEEeccccCCCCCcCHHH-----HHHcc----------ccccCCCCcEEEecCC
Q 022583 12 KSTVIAVFIASEENSAITGVGVDA-----LVKDG----------LLNKLKGGPLYWIDTA 56 (295)
Q Consensus 12 ~~~v~~~~~~dEE~g~~~~~Ga~~-----l~~~~----------~~~~~~~d~~i~~e~~ 56 (295)
...++++|...||+|+....||+. ++++- +...+.++++|..|.+
T Consensus 252 ~~~~~~~~~d~EEVGs~~~~GA~s~~l~~~l~ri~~~~~~~~~~~~~~i~~s~~IS~Dva 311 (428)
T PRK02813 252 DATNVLAAFDHEEVGSATKQGADSPFLEDVLERIVLALGGDREDFLRALARSFLISADMA 311 (428)
T ss_pred CCeEEEEEEecCccCCCCCcccCchhHHHHHHHHHHhhcCchHHHHHhhCCCeEEEEecc
Confidence 678999999999999832227763 11111 1123567888887754
No 93
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=37.05 E-value=26 Score=34.66 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=31.4
Q ss_pred hhhcccCCCceeEEEEEEeccccCCCCCcCHHHHHHccc
Q 022583 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL 41 (295)
Q Consensus 3 ~L~~~~~~~~~~v~~~~~~dEE~g~~~~~Ga~~l~~~~~ 41 (295)
.|++.+++|.++|+|+.=.+||.|. .|+-.+++...
T Consensus 387 ~~~k~gwrP~RtI~F~sWdAeEfGl---iGStE~~E~~~ 422 (702)
T KOG2195|consen 387 KLKKRGWRPRRTILFASWDAEEFGL---LGSTEWAEEYL 422 (702)
T ss_pred HHHHcCCCccceEEEEEccchhccc---cccHHHHHHHH
Confidence 4667789999999999999999998 89999988653
No 94
>COG0766 MurA UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane]
Probab=25.90 E-value=1.9e+02 Score=26.57 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=48.6
Q ss_pred ccccceeee-cCCCCcceeCCeeEE------------EEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccc
Q 022583 124 STMKPTQWS-YPGGGINQIPGECTV------------SGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYV 190 (295)
Q Consensus 124 ~t~~~~~i~-~gg~~~n~iP~~~~~------------~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 190 (295)
+++.+..++ ..|..+.+|||+-++ .+.++-.. .+-++.+.+.++++...+..-+... ++
T Consensus 213 ~~I~I~GV~~L~g~~h~VipDRIEAGT~~~aaA~tgg~v~i~~v~----~~hl~~~~~kL~e~G~~~~~~~~~i----~v 284 (421)
T COG0766 213 STITIEGVEKLHGAEHSVIPDRIEAGTFLVAAAITGGDVTIENVR----PEHLEAVLAKLREAGVDIEEGEDGI----RV 284 (421)
T ss_pred CeEEEeccccccceeeEecCchhhHHHHHHHHHHhCCcEEEeCCC----HHHHHHHHHHHHHhCCeEEEcCCeE----EE
Confidence 455544444 236678999998553 34555553 5666666777776554432100000 00
Q ss_pred cCCCCcceeEEEEeccCCCccccCCCCHHHHHHHHH
Q 022583 191 LPDENIRGSLTLTFDEATNGVACNLDSRGFHVLCKA 226 (295)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~a 226 (295)
..+...-..++++ ...||++++|.+.+++.++..+
T Consensus 285 ~~~~~~~k~v~i~-T~p~PGFpTDmQaqf~~L~~~a 319 (421)
T COG0766 285 DMEGKRLKAVDIK-TLPYPGFPTDMQAQFMALLTVA 319 (421)
T ss_pred eccCCCCCcceec-cCCCCCCchhHHHHHHHHHhhc
Confidence 0000000111222 1249999999998887777655
No 95
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=24.67 E-value=3.4e+02 Score=21.16 Aligned_cols=65 Identities=8% Similarity=0.171 Sum_probs=33.6
Q ss_pred EEEEEEEeCCCCChHHHHHHHHHHHHHhhhhhhccccCCCCcccccCCCCcceeEEEEeccCC-CccccCCCCHHHHHHH
Q 022583 146 TVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGSLTLTFDEAT-NGVACNLDSRGFHVLC 224 (295)
Q Consensus 146 ~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~ 224 (295)
.+.+.+|++.. ...+...+++.+++.... + .+++.+++.... .......|.++++.+.
T Consensus 30 ~Ldi~~rlP~~--l~~lE~~ir~~i~~~l~R-----------------G--kV~v~i~~~~~~~~~~~~~in~~l~~~y~ 88 (159)
T PF03755_consen 30 FLDISIRLPRE--LSSLEPEIRKLIRKKLSR-----------------G--KVEVSIRVERSSESAVELRINEELAKAYY 88 (159)
T ss_pred ceeeEEeCCHH--HHHHHHHHHHHHHHhccc-----------------c--eEEEEEEEEECcccCCCcccCHHHHHHHH
Confidence 35667777742 344455555555543321 1 244445544332 2223445666777777
Q ss_pred HHHHHHh
Q 022583 225 KATEEVV 231 (295)
Q Consensus 225 ~a~~~~~ 231 (295)
++++++-
T Consensus 89 ~~l~~l~ 95 (159)
T PF03755_consen 89 EALKELA 95 (159)
T ss_pred HHHHHHH
Confidence 7766653
No 96
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=23.17 E-value=2.6e+02 Score=19.19 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=26.1
Q ss_pred eeEEEEEEEeCCCCChHHHHHHHHHHHHHh
Q 022583 144 ECTVSGDVRLTPFYNVTDVMKRLQEYVDDI 173 (295)
Q Consensus 144 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~ 173 (295)
+|++.+.+|..++.+..++...|-+.+...
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~ 33 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQ 33 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCC
Confidence 689999999999999988888888887754
Done!