BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022585
MLMCCGGRVLAGLYPAKKPLIPYNYHGGNSRFRRLNSNWRCRASEPESSSFAPSIDAESA
DKNAAGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELG
ISKEEQDNELPSFPSFIPFLPPLSAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIG
GTSYADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGT
GYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVGWTPNEIF

High Scoring Gene Products

Symbol, full name Information P value
AT5G61670 protein from Arabidopsis thaliana 3.1e-99
AT5G06130 protein from Arabidopsis thaliana 8.9e-70

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022585
        (295 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151556 - symbol:AT5G61670 "AT5G61670" species...   985  3.1e-99   1
TAIR|locus:2152845 - symbol:AT5G06130 species:3702 "Arabi...   707  8.9e-70   1


>TAIR|locus:2151556 [details] [associations]
            symbol:AT5G61670 "AT5G61670" species:3702 "Arabidopsis
            thaliana" [GO:0009536 "plastid" evidence=ISS] [GO:0009661
            "chromoplast organization" evidence=ISS] [GO:0016120 "carotene
            biosynthetic process" evidence=ISS] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB012239 eggNOG:NOG279301
            ProtClustDB:CLSN2686933 EMBL:AY065401 EMBL:AY094431 EMBL:AY117226
            EMBL:AY084568 EMBL:AY149953 IPI:IPI00531772 RefSeq:NP_200975.1
            RefSeq:NP_974975.1 UniGene:At.28655 ProteinModelPortal:Q9FKF4
            STRING:Q9FKF4 PaxDb:Q9FKF4 PRIDE:Q9FKF4 EnsemblPlants:AT5G61670.1
            EnsemblPlants:AT5G61670.2 GeneID:836289 KEGG:ath:AT5G61670
            TAIR:At5g61670 HOGENOM:HOG000265745 InParanoid:Q9FKF4 OMA:INEEQEH
            PhylomeDB:Q9FKF4 ArrayExpress:Q9FKF4 Genevestigator:Q9FKF4
            Uniprot:Q9FKF4
        Length = 307

 Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
 Identities = 202/283 (71%), Positives = 221/283 (78%)

Query:     7 GRVLAGLYPAKKPLIPYNYHGGNSRFRR-LNSNWRCRXXXXXXXXXXXXIDAES-ADKNA 64
             GR+L+  YP      PY +     +    L  N R R            +D+ES ADK A
Sbjct:     5 GRILSVSYPPD----PYTWRFSQYKLSSSLGRNRRLRWRFTALDPESSSLDSESSADKFA 60

Query:    65 AGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKE 124
             +GFCIIEGPETVQDFAKM+LQEI DNIRSRRNKIFLHMEEVRRLRIQQRIKN ELGI  E
Sbjct:    61 SGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNTELGIINE 120

Query:   125 EQDNEXXXXXXXXXXXXXXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIGGTSY 184
             EQ++E               AANLKVYYATCFSLIAG+ILFGGLLAP+LELKLGIGGTSY
Sbjct:   121 EQEHELPNFPSFIPFLPPLTAANLKVYYATCFSLIAGIILFGGLLAPTLELKLGIGGTSY 180

Query:   185 ADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLA 244
             ADFIQS+HLPMQLSQVDPIVASFSGGAVGVISALM+VEVNNVKQQE KRCKYCLGTGYLA
Sbjct:   181 ADFIQSLHLPMQLSQVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLA 240

Query:   245 CARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
             CARCS+TG+LVL EPVS + GG+  LS PKTERCSNCSG+GKV
Sbjct:   241 CARCSSTGALVLTEPVSAIAGGNHSLSPPKTERCSNCSGAGKV 283


>TAIR|locus:2152845 [details] [associations]
            symbol:AT5G06130 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002688
            EMBL:AY072147 EMBL:AY133750 IPI:IPI00527561 RefSeq:NP_196231.2
            UniGene:At.9801 ProteinModelPortal:Q8VYD8 SMR:Q8VYD8 PaxDb:Q8VYD8
            PRIDE:Q8VYD8 EnsemblPlants:AT5G06130.2 GeneID:830500
            KEGG:ath:AT5G06130 TAIR:At5g06130 eggNOG:NOG279301
            InParanoid:Q8VYD8 OMA:PCARCSA ProtClustDB:CLSN2686933
            ArrayExpress:Q8VYD8 Genevestigator:Q8VYD8 Uniprot:Q8VYD8
        Length = 315

 Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
 Identities = 140/230 (60%), Positives = 170/230 (73%)

Query:    59 SADKNAAGFCIIEGPETVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAE 118
             S D     FCIIEG ETVQDF +M+LQEI DNIRSRRNKIFL MEEVRRLR+QQRIK+ +
Sbjct:    62 SGDTVPNNFCIIEGSETVQDFVQMQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKSVK 121

Query:   119 -LGISKEEQDNEXXXXXXXXXXXXXXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKL 177
              +    E +  E                  LK  Y+T  +LI+G+I FGGL+AP+LELK+
Sbjct:   122 AINEDSELEATEMPEITSSIPFLPNVTPKTLKQLYSTSVALISGIIFFGGLIAPNLELKV 181

Query:   178 GIGGTSYADFIQSVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYC 237
             G+GGTSY DFI+S+HLP+QLSQVDPIVASFSGGAVGVIS LM++EVNNVKQQE+KRCKYC
Sbjct:   182 GLGGTSYEDFIRSLHLPLQLSQVDPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYC 241

Query:   238 LGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
             LGTGYL CARCS +G  + I+P++     +Q +    T+RC NCSG+GKV
Sbjct:   242 LGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKV 291


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      295       268   0.00096  114 3  11 22  0.47    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  196 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.35u 0.34s 20.69t   Elapsed:  00:00:02
  Total cpu time:  20.35u 0.34s 20.69t   Elapsed:  00:00:02
  Start:  Fri May 10 06:53:38 2013   End:  Fri May 10 06:53:40 2013

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