BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022585
(295 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P05041|PABB_ECOLI Para-aminobenzoate synthase component 1 OS=Escherichia coli (strain
K12) GN=pabB PE=1 SV=1
Length = 453
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 190 SVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCS 249
+ LP QL D + A+F GG++ + +E+ + + + Q+R +C GYL+ C
Sbjct: 345 TAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIID-ELEPQRRNAWCGSIGYLSF--CG 401
Query: 250 NTGSLVLIEPVSTVNG 265
N + + I ++ +NG
Sbjct: 402 NMDTSITIRTLTAING 417
>sp|Q3U1V8|M3K9_MOUSE Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus
GN=Map3k9 PE=2 SV=2
Length = 1077
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 415 LQDDWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 464
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CKYC GTG ++ + + G +V + +G Q + E+C+ C G+GKV
Sbjct: 158 CKYCSGTGQISVEQNTPFGRIVNRQTCRHCSGTGQMIK----EKCTTCHGTGKV 207
>sp|P80192|M3K9_HUMAN Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens
GN=MAP3K9 PE=1 SV=3
Length = 1104
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 76 VQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQD 127
+QD K E+QE+ D +R++ ++ EE+ R +QQ KN E + + EQ+
Sbjct: 422 LQDNWKHEIQEMFDQLRAKEKELRTWEEELTRAALQQ--KNQEELLRRREQE 471
>sp|B7JN38|DNAJ_BACC0 Chaperone protein DnaJ OS=Bacillus cereus (strain AH820) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q6HDK8|DNAJ_BACHK Chaperone protein DnaJ OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=dnaJ PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q634M8|DNAJ_BACCZ Chaperone protein DnaJ OS=Bacillus cereus (strain ZK / E33L)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C1ESK7|DNAJ_BACC3 Chaperone protein DnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|Q81LS3|DNAJ_BACAN Chaperone protein DnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C3L5R6|DNAJ_BACAC Chaperone protein DnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=dnaJ PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|C3P8L9|DNAJ_BACAA Chaperone protein DnaJ OS=Bacillus anthracis (strain A0248) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + S +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIK----EKCTTCHGSGKV 212
>sp|P12679|PABB_ENTAE Para-aminobenzoate synthase component 1 OS=Enterobacter aerogenes
GN=pabB PE=1 SV=1
Length = 451
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 190 SVHLPMQLSQVDPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCS 249
+ LP L D + A+F GG++ + +E+ + + + Q+R +C GYL+ C
Sbjct: 343 TARLPAHLHAADLLRAAFPGGSITGAPKVRAMEIID-ELEPQRRNAWCGSIGYLSF--CG 399
Query: 250 NTGSLVLIEPVSTVNG 265
N S + I ++ G
Sbjct: 400 NMDSSITIRTLTAWQG 415
>sp|Q5TCX8|M3KL4_HUMAN Mitogen-activated protein kinase kinase kinase MLK4 OS=Homo sapiens
GN=MLK4 PE=1 SV=1
Length = 1036
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 66 GFCIIEGPE----TVQDFAKMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGI 121
G + E P+ ++QD K+E+Q++ D +R++ ++ EE+ R +QQ+ + EL
Sbjct: 403 GAVMTEMPQESFHSMQDDWKLEIQQMFDELRTKEKELRSREEELTRAALQQKSQE-ELLK 461
Query: 122 SKEEQ 126
+E+Q
Sbjct: 462 RREQQ 466
>sp|Q9KWS6|DNAJ_BACTR Chaperone protein DnaJ OS=Bacillus thermoglucosidasius GN=dnaJ PE=3
SV=1
Length = 380
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 230 EQKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
+++ C YC GTG ++ + + G +V G Q + ERC+ C G+G+V
Sbjct: 161 KKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIK----ERCTTCGGTGRV 214
>sp|Q9UXR9|DNAJ_METTE Chaperone protein DnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3
SV=1
Length = 387
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R V ST G Q + +P C CSG+G+V
Sbjct: 158 KRCPTCGGTGQIRTTRTGLGMQFVSTTTCSTCRGKGQVIESP----CPVCSGTGRV 209
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 268 QPLSAPKTERCSNCSGSG-KVGWTPN 292
+ + P+TERCSNCSG+G + G +P
Sbjct: 133 KDIDVPRTERCSNCSGTGARPGTSPK 158
>sp|A9VHU0|DNAJ_BACWK Chaperone protein DnaJ OS=Bacillus weihenstephanensis (strain
KBAB4) GN=dnaJ PE=3 SV=1
Length = 368
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 160 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQMIK----EKCTTCHGSGKV 209
>sp|Q27237|TID_DROME Protein tumorous imaginal discs, mitochondrial OS=Drosophila
melanogaster GN=l(2)tid PE=1 SV=2
Length = 520
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 233 RCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
RC+YC GTG+ + TG V+ G Q + P CS C G G+
Sbjct: 243 RCQYCNGTGFETVS----TGPFVMRSTCRYCQGTRQHIKYP----CSECEGKGRT 289
>sp|Q182E7|DNAJ_CLOD6 Chaperone protein DnaJ OS=Clostridium difficile (strain 630)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 231 QKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSG 285
+K C C GTG + + + G++ P S NG + + +P CS C G+G
Sbjct: 168 KKTCSTCNGTGQVRTVQRTPFGNIASSRPCSACNGTGEVIESP----CSKCHGTG 218
>sp|B9IY80|DNAJ_BACCQ Chaperone protein DnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3
SV=1
Length = 371
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7HPL2|DNAJ_BACC7 Chaperone protein DnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|Q730M2|DNAJ_BACC1 Chaperone protein DnaJ OS=Bacillus cereus (strain ATCC 10987)
GN=dnaJ PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7HCT9|DNAJ_BACC4 Chaperone protein DnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|B7IYG6|DNAJ_BACC2 Chaperone protein DnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ
PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 234 CKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
CK+C G+G ++ + + G +V + +G Q + E+C+ C GSGKV
Sbjct: 163 CKHCSGSGQVSVEQNTPFGRIVNRQACGHCSGTGQIIK----EKCTTCHGSGKV 212
>sp|P0CW06|DNAJ_METMZ Chaperone protein DnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1
Length = 389
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R + V S +G Q + +P C CSG+G+V
Sbjct: 159 KRCPNCGGTGQVRTTRSTLGMQFVSTTTCSACHGRGQVVESP----CPTCSGAGRV 210
>sp|P0CW07|DNAJ_METMA Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dnaJ
PE=3 SV=1
Length = 389
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R + V S +G Q + +P C CSG+G+V
Sbjct: 159 KRCPNCGGTGQVRTTRSTLGMQFVSTTTCSACHGRGQVVESP----CPTCSGAGRV 210
>sp|O96133|YB145_PLAF7 Uncharacterized protein PFB0145c OS=Plasmodium falciparum (isolate
3D7) GN=PFB0145c PE=2 SV=1
Length = 1979
Score = 32.0 bits (71), Expect = 6.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 81 KMELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQDNEL 130
K E++ + NI+S N I + EEV L+ + +K +E+ + KEE D +L
Sbjct: 661 KQEMELLRGNIKSSEN-ILNNDEEVCDLKRKLSLKESEMKMMKEEHDKKL 709
>sp|Q8FNF5|DNAJ1_COREF Chaperone protein DnaJ 1 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=dnaJ1 PE=3 SV=1
Length = 378
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
K C C G+G + + S G+++ P T NG + + P C C+G G+V
Sbjct: 157 KTCGTCHGSGEIQEVQRSFLGNVMTSRPCHTCNGTGEVIPDP----CDECAGDGRV 208
>sp|C5D4U0|DNAJ_GEOSW Chaperone protein DnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ
PE=3 SV=1
Length = 380
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 230 EQKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
+++ C YC GTG ++ + + G +V G Q + E+C+ C G+G+V
Sbjct: 161 KKETCSYCHGTGQISTEQSTPFGRIVNRRTCPYCGGTGQYIK----EKCTTCGGTGRV 214
>sp|P18187|PHNS_DESFR Periplasmic [NiFe] hydrogenase small subunit OS=Desulfovibrio
fructosovorans GN=hydA PE=1 SV=4
Length = 314
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 47 ESSSFAPSIDAESADKNAAGFCIIE----GPETVQDFAKMELQEIHDNIRS 93
E+S FAPS D+E A K GFC+ E GP T + K+ +++ +++
Sbjct: 244 EASEFAPSFDSEEAKK---GFCLYELGCKGPVTYNNCPKVLFNQVNWPVQA 291
>sp|O88943|KCNQ2_RAT Potassium voltage-gated channel subfamily KQT member 2 OS=Rattus
norvegicus GN=Kcnq2 PE=2 SV=1
Length = 852
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 25 YHGGN---SRFRRLNSNWRCRASEP-----ESSSFAPSIDAESADKNAAGFCIIEGPETV 76
Y GGN + F RL CR SE ++S PS+D E +++ +GF I + E +
Sbjct: 735 YSGGNRASTEFLRLEGTPACRPSEAALRDSDTSISIPSVDHEELERSFSGFSISQSKENL 794
Query: 77 QDFA 80
A
Sbjct: 795 NALA 798
>sp|C4YJE1|ENOPH_CANAW Enolase-phosphatase E1 OS=Candida albicans (strain WO-1) GN=UTR4
PE=3 SV=1
Length = 271
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 84 LQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEE--QDNEL--PSFPS---F 136
L+++ DNI I+ H + + I+ I + G+ ++ ++NEL P + F
Sbjct: 67 LKQLPDNITKSSESIYKHFKNLVDQDIKDPILKSLQGLIWKQGYENNELQAPIYQDSVEF 126
Query: 137 IPFLPPLSAANLKVYYATCFSLIAGVILFGGL 168
I P S+ N K+Y + S+ A ++LFG +
Sbjct: 127 IESFPTKSSTNNKIYIYSSGSIKAQILLFGHV 158
>sp|Q8TQR1|DNAJ_METAC Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
Length = 382
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
KRC C GTG + R + + ST +G Q + +P C C G+G+V
Sbjct: 159 KRCPTCGGTGQVRTTRSTLGMQFISTTTCSTCHGRGQIIESP----CPVCGGAGRV 210
>sp|B2G6W4|DNAJ_LACRJ Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 222 EVNNVKQQEQKRCKYCLGTGY------LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKT 275
+ +K CK C GTG + C RC G + + PL +T
Sbjct: 139 KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQT--------PLGNMQT 190
Query: 276 E-RCSNCSGSGKV 287
+ C C+G+GK+
Sbjct: 191 QTTCPECNGTGKI 203
>sp|A5VJE8|DNAJ_LACRD Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 222 EVNNVKQQEQKRCKYCLGTGY------LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKT 275
+ +K CK C GTG + C RC G + + PL +T
Sbjct: 139 KTTTIKYDRDAECKTCHGTGAKPGKSPITCPRCHGAGVITSVRQT--------PLGNMQT 190
Query: 276 E-RCSNCSGSGKV 287
+ C C+G+GK+
Sbjct: 191 QTTCPECNGTGKI 203
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain Massachusetts
/ E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 232 KRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKV 287
K C C G+G + R + GS V + G +S P CS+C G G V
Sbjct: 162 KTCPKCNGSGQIKVQRNTALGSFVSVNTCDMCGGKGTIISDP----CSDCKGKGTV 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,571,145
Number of Sequences: 539616
Number of extensions: 4524050
Number of successful extensions: 12732
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 12639
Number of HSP's gapped (non-prelim): 108
length of query: 295
length of database: 191,569,459
effective HSP length: 117
effective length of query: 178
effective length of database: 128,434,387
effective search space: 22861320886
effective search space used: 22861320886
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)