BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022590
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZY6|FIE2_MAIZE Polycomb group protein FIE2 OS=Zea mays GN=FIE2 PE=2 SV=1
Length = 379
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/294 (82%), Positives = 264/294 (89%), Gaps = 2/294 (0%)
Query: 1 MCYVDQ-KEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 58
YVD+ K+ESFYT+SWA + VDG P LVA G NGIIRVI+ + EKL KSFVGHGDSINE
Sbjct: 79 QAYVDEDKDESFYTLSWARDHVDGSPLLVAAGSNGIIRVINCATEKLAKSFVGHGDSINE 138
Query: 59 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 118
IRTQPLKPSL++SASKDESVRLWNV TGICILIFAGAGGHRNEVLSVDFHPSDI R ASC
Sbjct: 139 IRTQPLKPSLIISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIERFASC 198
Query: 119 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 178
GMDNTVKIWSMKEFW YV+KS++WTDLPSKFPTKYVQFPV IA+VHSNYVDC RWLGDFI
Sbjct: 199 GMDNTVKIWSMKEFWLYVDKSYSWTDLPSKFPTKYVQFPVLIAAVHSNYVDCTRWLGDFI 258
Query: 179 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238
LSKSVDNEIVLWEPK KEQSPGEG+ DILQKYPVPECDIWFIKFSCDFH+N AIGNREG
Sbjct: 259 LSKSVDNEIVLWEPKTKEQSPGEGSIDILQKYPVPECDIWFIKFSCDFHFNQLAIGNREG 318
Query: 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292
KI+VWE+QSSPPVLIARL + Q KSPIRQTA+S+DGSTIL EDG IWRWD +
Sbjct: 319 KIYVWEVQSSPPVLIARLYNQQCKSPIRQTAVSFDGSTILGAGEDGTIWRWDEV 372
>sp|Q9LT47|FIE_ARATH Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
OS=Arabidopsis thaliana GN=FIE PE=1 SV=2
Length = 369
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 231/291 (79%), Positives = 262/291 (90%), Gaps = 1/291 (0%)
Query: 3 YVDQ-KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT 61
Y D+ KEESFYTVSWAC V+G P++ AGG+ GIIRVIDV++E +HKS VGHGDS+NEIRT
Sbjct: 77 YADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRT 136
Query: 62 QPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 121
QPLKP LV++ASKDESVRLWNV+TGICILIFAGAGGHR EVLSVDFHPSDIYR ASCGMD
Sbjct: 137 QPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMD 196
Query: 122 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSK 181
T+KIWSMKEFWTYVEKSFTWTD PSKFPTK+VQFPVF AS+H+NYVDCNRW GDFILSK
Sbjct: 197 TTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKFVQFPVFTASIHTNYVDCNRWFGDFILSK 256
Query: 182 SVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241
SVDNEI+LWEP++KE SPGEG +D+L +YPVP CDIWFIKFSCD H ++ AIGN+EGK++
Sbjct: 257 SVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIWFIKFSCDLHLSSVAIGNQEGKVY 316
Query: 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292
VW+L+S PPVLI +LSH QSKS IRQTAMS DGSTIL+CCEDG IWRWD I
Sbjct: 317 VWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDVI 367
>sp|Q8VZY7|FIE1_MAIZE Polycomb group protein FIE1 OS=Zea mays GN=FIE1 PE=2 SV=1
Length = 461
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 244/292 (83%), Gaps = 2/292 (0%)
Query: 3 YVDQ-KEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD+ K+ESFYT+SW + VD P LVA G N IIRVI+ + EKL KS VGHG SI+EIR
Sbjct: 139 YVDEDKDESFYTLSWTIDQVDSSPLLVAAGSNRIIRVINCATEKLDKSLVGHGGSIHEIR 198
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM 120
T KPSL++SASKDES+RLWNV TGICIL+FAGAGGHR++VLSVDFHP+++ ASCGM
Sbjct: 199 THASKPSLIISASKDESIRLWNVHTGICILVFAGAGGHRHDVLSVDFHPTEVGIFASCGM 258
Query: 121 DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILS 180
DNTVKIWSMKEFW YVEKS++WT PSKFPT+ +QFPV A+VHS+YVDC RWLGDFILS
Sbjct: 259 DNTVKIWSMKEFWIYVEKSYSWTGHPSKFPTRNIQFPVLTAAVHSDYVDCTRWLGDFILS 318
Query: 181 KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240
KSV N ++LWEPK ++ PGEG+ D+LQKYPVP+C +WF+KFSCDF+ N AIGN +G+I
Sbjct: 319 KSVKNAVLLWEPKPDKRRPGEGSVDVLQKYPVPKCSLWFMKFSCDFYSNQMAIGNNKGEI 378
Query: 241 FVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292
+VWE+QSSPPVLI RL + + KSPIRQTA+S+DGSTIL +DGAIWRWD +
Sbjct: 379 YVWEVQSSPPVLIDRLCNQECKSPIRQTAVSFDGSTILGAADDGAIWRWDEV 430
>sp|O16023|ESC_MUSDO Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1
Length = 428
Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 188/306 (61%), Gaps = 19/306 (6%)
Query: 1 MCYVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 58
MCY D +E FYT SW+ ++ P L G G+IRVID+ + ++VGHG +INE
Sbjct: 117 MCYADPDPDEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQAINE 176
Query: 59 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIA 116
++ P + +L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF D+ RI
Sbjct: 177 LKFHPRQANLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDF---DLRGERIM 233
Query: 117 SCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCN 171
S GMD+++K+W + EF +E S T+ S+ FPT FP F +H NYVDC
Sbjct: 234 SSGMDHSLKLWRIDTPEFKDKIEMSRTFNPNKSQLPFPTIMQHFPEFSTRDIHRNYVDCV 293
Query: 172 RWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDF 226
+W GDF+LSKS +N IV W+P Q+ P + + I+ ++ EC+IWF++F +
Sbjct: 294 QWFGDFVLSKSCENSIVCWKPGQLHQTLSQLKPNDPSCTIISEFNYDECEIWFVRFGFNP 353
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
+ A+GN+ GK++VWEL S P + L++ + S +RQTA S D + ++ C+DG
Sbjct: 354 WHKIVALGNQYGKVYVWELDPSDPRHTHSSTLNNIRCTSIVRQTAFSRDATVLVWVCDDG 413
Query: 285 AIWRWD 290
+WRW+
Sbjct: 414 TVWRWN 419
>sp|Q26458|ESC_DROVI Polycomb protein esc OS=Drosophila virilis GN=esc PE=3 SV=1
Length = 425
Score = 238 bits (606), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 185/303 (61%), Gaps = 15/303 (4%)
Query: 2 CYVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEI 59
CY D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE+
Sbjct: 117 CYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINEL 176
Query: 60 RTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119
+ P K L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF+ RI S G
Sbjct: 177 KFHPHKLQLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRGD-RIVSSG 235
Query: 120 MDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCNRWL 174
MD+++K+W + +EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 236 MDHSLKLWCLNTQEFQHKIELSQTFSQEKSTLPFPTITKHFPDFSTRDIHRNYVDCVQWF 295
Query: 175 GDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHYN 229
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 296 GNFVLSKSCENAIVCWKPGQLHQSFEQLKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQK 355
Query: 230 AAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 287
A+GN++GK++VWE+ S P + L + +S + +RQ A S D S ++ C+D +W
Sbjct: 356 VIALGNQQGKVYVWEMDPSDPEGAHMTTLHNLRSVATVRQIAFSRDASVLVYVCDDATVW 415
Query: 288 RWD 290
RW+
Sbjct: 416 RWN 418
>sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musculus GN=Eed PE=1 SV=1
Length = 441
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 119 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++ C+D
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 432
Query: 285 AIWRWDAI 292
+IWRWD +
Sbjct: 433 SIWRWDRL 440
>sp|O75530|EED_HUMAN Polycomb protein EED OS=Homo sapiens GN=EED PE=1 SV=2
Length = 441
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 119 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++ C+D
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 432
Query: 285 AIWRWDAI 292
+IWRWD +
Sbjct: 433 SIWRWDRL 440
>sp|Q3SZ25|EED_BOVIN Polycomb protein EED OS=Bos taurus GN=EED PE=2 SV=1
Length = 441
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 119 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++ C+D
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 432
Query: 285 AIWRWDAI 292
+IWRWD +
Sbjct: 433 SIWRWDRL 440
>sp|Q8UUP2|EEDA_XENLA Polycomb protein eed-A OS=Xenopus laevis GN=eed-a PE=1 SV=1
Length = 438
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 135 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 194
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 195 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 251
Query: 119 GMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + T +++S+ + PSK F ++ + FP F +H NYVDC
Sbjct: 252 GMDHSLKLWRINSLRMKTAIKESYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNYVDCV 309
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 310 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 369
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L++ P L++ + S +RQT+ S D S +++ C+D
Sbjct: 370 WQKMLALGNQVGKLYVWDLEAEDPHKAKCTTLTYPKCASAVRQTSFSRDSSILVAVCDDA 429
Query: 285 AIWRWDAI 292
IWRWD +
Sbjct: 430 TIWRWDRL 437
>sp|Q24338|ESC_DROME Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1
Length = 425
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 185/307 (60%), Gaps = 15/307 (4%)
Query: 2 CYVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEI 59
CY D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE+
Sbjct: 117 CYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINEL 176
Query: 60 RTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119
+ P K L++S SKD ++RLWN+Q+ +CI I G GHR+EVLS+DF+ RI S G
Sbjct: 177 KFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGD-RIVSSG 235
Query: 120 MDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCNRWL 174
MD+++K+W + EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 236 MDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWF 295
Query: 175 GDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHYN 229
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 296 GNFVLSKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQK 355
Query: 230 AAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 287
A+GN++GK++VWEL S P + L +++S + +RQ A S D S ++ C+D +W
Sbjct: 356 VIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLVYVCDDATVW 415
Query: 288 RWDAIPT 294
RW+ T
Sbjct: 416 RWNRRQT 422
>sp|Q5ZKH3|EED_CHICK Polycomb protein EED OS=Gallus gallus GN=EED PE=2 SV=1
Length = 446
Score = 234 bits (597), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 143 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 202
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 203 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 259
Query: 119 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 260 GMDHSLKLWRINSKRMINAIKESYEYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 317
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 318 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 377
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++ C+D
Sbjct: 378 WQKMLALGNQVGKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILIAVCDDA 437
Query: 285 AIWRWDAI 292
+IWRWD +
Sbjct: 438 SIWRWDRL 445
>sp|Q566T0|EED_DANRE Polycomb protein eed OS=Danio rerio GN=eed PE=2 SV=2
Length = 443
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 183/308 (59%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVDGI-PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 140 YVDADADENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELK 199
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS DF D+ +I SC
Sbjct: 200 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADF---DLLGEKIMSC 256
Query: 119 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + + + S+ + PSK F ++ + FP F +H NYVDC
Sbjct: 257 GMDHSLKLWRLDSERLQRAIRGSYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNYVDCV 314
Query: 172 RWLGDFILSKSVDNEIVLWEPKMKEQ-----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P E P E IL ++ +CDIW+++FS DF
Sbjct: 315 RWLGDLILSKSCENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRFSMDF 374
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L+ + S IRQT+ S D S +++ C+D
Sbjct: 375 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTLPRCTSAIRQTSFSRDSSILIAVCDDA 434
Query: 285 AIWRWDAI 292
+IWRWD +
Sbjct: 435 SIWRWDRL 442
>sp|Q6AZS2|EEDB_XENLA Polycomb protein eed-B OS=Xenopus laevis GN=eed-b PE=1 SV=2
Length = 438
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 188/308 (61%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 135 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 194
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 195 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 251
Query: 119 GMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + T +++S+ + P+K F ++ V FP F +H NYVDC
Sbjct: 252 GMDHSLKLWRINSLRMKTAIKESYDYN--PNKTNRPFVSQKVHFPDFSTRDIHRNYVDCV 309
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++FS DF
Sbjct: 310 RWLGDLILSKSCENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRFSMDF 369
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L++ + S IRQT+ S D S +++ C+D
Sbjct: 370 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSVLIAVCDDS 429
Query: 285 AIWRWDAI 292
IWRWD +
Sbjct: 430 TIWRWDRL 437
>sp|Q28DT7|EED_XENTR Polycomb protein eed OS=Xenopus tropicalis GN=eed PE=2 SV=1
Length = 438
Score = 231 bits (588), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 187/308 (60%), Gaps = 23/308 (7%)
Query: 3 YVD-QKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
YVD +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 135 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 194
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 118
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 195 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 251
Query: 119 GMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 171
GMD+++K+W + T + +S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 252 GMDHSLKLWRINSLRMKTAIRESYEYN--PNKTNRPFVSQKIHFPDFSTRDIHRNYVDCV 309
Query: 172 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 226
RWLGD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++FS DF
Sbjct: 310 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDF 369
Query: 227 HYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284
A+GN+ GK++VW+L+ P L++ + S IRQT+ S D S +++ C+D
Sbjct: 370 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILVAVCDDA 429
Query: 285 AIWRWDAI 292
IWRWD +
Sbjct: 430 TIWRWDRL 437
>sp|Q9GYS1|MES6_CAEEL Polycomb protein mes-6 OS=Caenorhabditis elegans GN=mes-6 PE=1 SV=2
Length = 459
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 153/355 (43%), Gaps = 70/355 (19%)
Query: 6 QKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEI 59
++EES +TV+W + D PF +V GG G I VID + KL G IN+I
Sbjct: 95 EREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLSNRLRSVGWEINDI 154
Query: 60 RTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119
RT P +L+V AS D+S+R+ +++ C+++ G H +LSVD+ +D I SCG
Sbjct: 155 RTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVDW-STDGDFILSCG 213
Query: 120 MDNTVKIW--SMKEFWTYVE-----------------------------KSFTWTDLPSK 148
D+ + W S+K+ ++E KS ++P K
Sbjct: 214 FDHQLMEWDLSVKQVKEHLERACKALHQDKINVLTQSQDIPYVSKGTMRKSAVSRNIPDK 273
Query: 149 ------------FPTKYVQFPVFIAS-----VHSNYVDCNRWL--GDFILSKSVDNE--I 187
P P++ S +HS+YVDC R+L ++ LSK NE I
Sbjct: 274 EEDQLLELHRELIPRPSCLLPIYTPSSVSTDMHSDYVDCIRFLIGTNYALSKGCGNEKAI 333
Query: 188 VLWE---PKMKEQSPGEGT-------ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237
W PK + ++ G + VP WFIKF+ D G
Sbjct: 334 HFWRFGPPKGEVENRIHGNVLRPKSCTTKFRTMNVPSGSAWFIKFAVDPRRRWLVCGGAG 393
Query: 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292
G + ++L+++ S++ +RQ + S G ++ ++G + R+D +
Sbjct: 394 GSVMFFDLRNNEETNPTHTCSVGSRT-VRQASFSTCGRFLVLVTDEGFVCRFDRV 447
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 59/281 (20%)
Query: 25 FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+D+++R+W++
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDL 200
Query: 84 Q-TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 142
+ G + + GH+N V S F P D + S G V +W+M ++ T + K
Sbjct: 201 KDDGNMMKVLR---GHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKY-TMIRK---- 251
Query: 143 TDLPSKFPTKYVQFPVFIASVHSNYVDCN-RWLGDFILSKSVDNEIVLWEPKMKEQSPGE 201
+ H + V C+ G + + S D + +W+P
Sbjct: 252 -----------------LEGHHHDVVACDFSPDGALLATASYDTRVYIWDPH-------- 286
Query: 202 GTADILQKY------PVP-----ECDIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSS 248
DIL ++ P P D W + FS D + A+ ++ + W +
Sbjct: 287 -NGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADDK--MVRFWRIDED 343
Query: 249 PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289
PV +A LS+ A S DGS + + DG+++ W
Sbjct: 344 YPVQVAPLSNGLC------CAFSTDGSVLAAGTHDGSVYFW 378
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P +P V+S+S D ++LW+
Sbjct: 72 IVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQP-FVLSSSDDMLIKLWDWDK 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G +C IF G H + V+ V F+P D AS +D TVK+WS+
Sbjct: 131 GWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTVKVWSL 172
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +++ + P P + ++ S+D +VRLW+
Sbjct: 200 PYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELP-ITLTGSEDGTVRLWHS 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1
PE=1 SV=1
Length = 421
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 49/276 (17%)
Query: 25 FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
L+A G+N G I++ DV KL + V H + + ++ P L+VSAS+D+++R+W++
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDL 200
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 143
+ ++ A H+N V S F P D + S G V +W+M ++ T + K
Sbjct: 201 KDDGNMVKVLRA--HQNWVYSCAFSP-DCSMLCSVGASKAVFLWNMDKY-TMIRK----- 251
Query: 144 DLPSKFPTKYVQFPVFIASVHSNYVDCN-RWLGDFILSKSVDNEIVLWEPKMKEQSPGEG 202
+ H + V C+ G + + S D + +W+P G+
Sbjct: 252 ----------------LEGHHHDVVACDFSPDGALLATASYDTRVYVWDPHN-----GDL 290
Query: 203 TADILQKYPVP-------ECDIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLI 253
+ +P P D W + FS D + A+ ++ + W + PV +
Sbjct: 291 LMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVASLADDK--MVRFWRIDEDCPVQV 348
Query: 254 ARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289
A LS+ A S DGS + + DG+++ W
Sbjct: 349 APLSNGLC------CAFSTDGSVLAAGTHDGSVYFW 378
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P +P V+S+S D ++LW+
Sbjct: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQP-FVLSSSDDMLIKLWDWDK 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G +C IF G H + V+ V F+P D AS +D TVK+WS+
Sbjct: 131 GWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTVKVWSL 172
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VRLW+
Sbjct: 200 PYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELP-IILTGSEDGTVRLWHS 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 2 CYVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT 61
C K + + S A + DG L +G + I++ + + K+++GH +S+ I
Sbjct: 802 CLRTLKSHTGWVRSVAFSADG-QTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAY 860
Query: 62 QPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 121
P ++VS S D +++LW+ QT ICI GH NEV SV F P D +A +D
Sbjct: 861 SP-DSKILVSGSGDRTIKLWDCQTHICIKTLH---GHTNEVCSVAFSP-DGQTLACVSLD 915
Query: 122 NTVKIWSMK 130
+V++W+ +
Sbjct: 916 QSVRLWNCR 924
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
+ G + +++ ++S + K+ H D I + P L+ SAS D+SVRLW+
Sbjct: 1034 IIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSP-DGQLLASASADQSVRLWDCC 1092
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 131
TG C+ I GH N V S F P+ IA+C D TVKIW ++
Sbjct: 1093 TGRCVGILR---GHSNRVYSAIFSPNGEI-IATCSTDQTVKIWDWQQ 1135
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 45/258 (17%)
Query: 35 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 94
+RV +V + KL GH + + + P ++ S DE+V+LW+V+ G+CI
Sbjct: 666 VRVWEVKSGKLLLICRGHSNWVRFVVFSP-DGEILASCGADENVKLWSVRDGVCIKTLT- 723
Query: 95 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154
GH +EV SV FHP D +AS D T+K+W +++ T L +
Sbjct: 724 --GHEHEVFSVAFHP-DGETLASASGDKTIKLWDIQDG----------TCLQT------- 763
Query: 155 QFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV 212
+ H+++V C + G+ + S + D+ I LW+ L+
Sbjct: 764 ------LTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQ---------GKCLRTLKS 808
Query: 213 PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY 272
+ + FS D A+ G+R KI+ + + L + H S I A S
Sbjct: 809 HTGWVRSVAFSADGQTLASGSGDRTIKIWNYH---TGECLKTYIGHTNSVYSI---AYSP 862
Query: 273 DGSTILSCCEDGAIWRWD 290
D ++S D I WD
Sbjct: 863 DSKILVSGSGDRTIKLWD 880
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 2 CYVDQKEESFY-TVSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSIN 57
C Q +++Y WA V P L +G + +++ D K S GH D I
Sbjct: 923 CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIY 982
Query: 58 EIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIAS 117
I P +L SAS D SVRLWN+ TG C I H + V +V FHP IA+
Sbjct: 983 GIAFSPDSQTLA-SASTDSSVRLWNISTGQCFQILL---EHTDWVYAVVFHPQGKI-IAT 1037
Query: 118 CGMDNTVKIWSM 129
D TVK+W++
Sbjct: 1038 GSADCTVKLWNI 1049
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 35 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 94
+++ D K K+ GH + + +I P ++ SAS D++VR+W+V TG C I
Sbjct: 1128 VKIWDWQQGKCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDVNTGKCHHICI- 1185
Query: 95 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
GH + V SV F P D +AS D TV+IW++K
Sbjct: 1186 --GHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVK 1218
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 41/266 (15%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
L + G + +++ V + K+ GH + + P +L SAS D++++LW++Q
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLA-SASGDKTIKLWDIQ 756
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144
G C+ GH + V V F P D +AS D+T+K+W V +
Sbjct: 757 DGTCLQTLT---GHTDWVRCVAFSP-DGNTLASSAADHTIKLWD-------VSQGKCLRT 805
Query: 145 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTA 204
L S T +V+ F A G + S S D I +W T
Sbjct: 806 LKSH--TGWVRSVAFSAD------------GQTLASGSGDRTIKIWNYH---------TG 842
Query: 205 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSP 264
+ L+ Y ++ I +S D + G+R I +W+ Q+ + + H + +
Sbjct: 843 ECLKTYIGHTNSVYSIAYSPDSKILVSGSGDR--TIKLWDCQTH---ICIKTLHGHT-NE 896
Query: 265 IRQTAMSYDGSTILSCCEDGAIWRWD 290
+ A S DG T+ D ++ W+
Sbjct: 897 VCSVAFSPDGQTLACVSLDQSVRLWN 922
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
LV+G + I++ D K+ GH + + + P +L S D+SVRLWN +
Sbjct: 866 ILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLAC-VSLDQSVRLWNCR 924
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
TG C+ + G+ + L V F P D +AS D TVK+W
Sbjct: 925 TGQCLKAWY---GNTDWALPVAFSP-DRQILASGSNDKTVKLW 963
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
L + + +R+ DV+ K H +GH ++ + P +V S S+D++VR+WNV+
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVK 1218
Query: 85 TGICILIF 92
TG C+ I
Sbjct: 1219 TGECLQIL 1226
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Query: 1 MCYVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
C E S + A + DG L + + +R+ D + GH + +
Sbjct: 1053 QCLKTLSEHSDKILGMAWSPDG-QLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAI 1111
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM 120
P ++ + S D++V++W+ Q G C+ GH N V + F P D +AS
Sbjct: 1112 FSP-NGEIIATCSTDQTVKIWDWQQGKCLKTLT---GHTNWVFDIAFSP-DGKILASASH 1166
Query: 121 DNTVKIWSM 129
D TV+IW +
Sbjct: 1167 DQTVRIWDV 1175
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 21 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 80
DG A G + I++ D+ + ++ GH D + + P +L SA+ D +++L
Sbjct: 737 DGETLASASG-DKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA-DHTIKL 794
Query: 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 128
W+V G C+ H V SV F +D +AS D T+KIW+
Sbjct: 795 WDVSQGKCLRTLK---SHTGWVRSVAF-SADGQTLASGSGDRTIKIWN 838
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
L + + +R+ ++S + + + H D + + P + ++ + S D +V+LWN+ T
Sbjct: 993 LASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHP-QGKIIATGSADCTVKLWNIST 1051
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
G C+ + H +++L + + P D +AS D +V++W
Sbjct: 1052 GQCLKTLS---EHSDKILGMAWSP-DGQLLASASADQSVRLW 1089
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 46/303 (15%)
Query: 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 67
E++ Y+VS++ + I +GG + I++ S+ L K+ GH ++N + P +
Sbjct: 1113 EDAVYSVSFSPDGQTI---ASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKN 1169
Query: 68 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
L SAS D S++LW+ +G ++ GH V++V F P D IA+ D TVK+W
Sbjct: 1170 LA-SASSDHSIKLWDTTSGQLLMTLT---GHSAGVITVRFSP-DGQTIAAGSEDKTVKLW 1224
Query: 128 SMKE--FWTYVEKSFTWTD----------LPSKFPTKYVQF-------PVFIASVHSNYV 168
++ + W + L S K ++ V H++ V
Sbjct: 1225 HRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSV 1284
Query: 169 -DCN-RWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDF 226
D N G I S S DN I LW E L+ + ++ + F D
Sbjct: 1285 WDVNFSSDGKAIASASRDNTIKLWNRHGIE----------LETFTGHSGGVYAVNFLPDS 1334
Query: 227 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286
+ A+A + + I +W+ P LI+ L S + + +DGS I + DG I
Sbjct: 1335 NIIASA--SLDNTIRLWQ---RP--LISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNI 1387
Query: 287 WRW 289
W
Sbjct: 1388 QLW 1390
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 47/285 (16%)
Query: 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSL 68
++ Y +S+ D + + + +++ V + K K+ +GH + +N++ P +L
Sbjct: 1405 KAIYGISFTPQGD---LIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTL 1461
Query: 69 VVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 128
SAS+D +V+LWNV G GH +EV V F P D IAS D T+++W
Sbjct: 1462 A-SASRDNTVKLWNVSDGKFKKTLK---GHTDEVFWVSFSP-DGKIIASASADKTIRLWD 1516
Query: 129 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIV 188
SF+ + S P V+S + + G + S S D +
Sbjct: 1517 ----------SFSGNLIKS--------LPAHNDLVYSVNFNPD---GSMLASTSADKTVK 1555
Query: 189 LWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 248
LW +L + ++ FS D Y A+A ++ KI W++
Sbjct: 1556 LWRSH---------DGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKI--WQIDGH 1604
Query: 249 PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA--IWRWDA 291
L+ L Q ++ + S DG T++S D IWR+D+
Sbjct: 1605 ---LLTTL--PQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDS 1644
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 42/239 (17%)
Query: 51 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 110
GH D + I + S S D++++LW+ +F GH + V SV F P
Sbjct: 1070 GHKDGVISISISR-DGQTIASGSLDKTIKLWSRDG----RLFRTLNGHEDAVYSVSFSP- 1123
Query: 111 DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 170
D IAS G D T+K+W + + K+ T + +V++ Y
Sbjct: 1124 DGQTIASGGSDKTIKLWQTSD--GTLLKTITGHE----------------QTVNNVYFSP 1165
Query: 171 NRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNA 230
+ G + S S D+ I LW+ + +L + ++FS D A
Sbjct: 1166 D---GKNLASASSDHSIKLWDTT---------SGQLLMTLTGHSAGVITVRFSPDGQTIA 1213
Query: 231 AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289
A G+ + + +W Q L+ L+ Q + + S DG T+ S D I W
Sbjct: 1214 A--GSEDKTVKLWHRQDGK--LLKTLNGHQDW--VNSLSFSPDGKTLASASADKTIKLW 1266
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 47 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 106
++F GH + + P +++ SAS D ++RLW + + AG G V +V
Sbjct: 1316 ETFTGHSGGVYAVNFLP-DSNIIASASLDNTIRLWQRPLISPLEVLAGNSG----VYAVS 1370
Query: 107 F-HPSDIYRIASCGMDNTVKIWSMKE 131
F H I IA+ G D +++W ++
Sbjct: 1371 FLHDGSI--IATAGADGNIQLWHSQD 1394
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 72 VVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP-YVLSSSDDMLIKLWDWEK 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G +C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 131 GWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 65 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 124
KP L+ + S D + ++W+ QT C+ G H + V +V FHP ++ I + D TV
Sbjct: 199 KPYLI-TGSDDHTAKVWDYQTKSCVQTLEG---HTHNVSAVSFHP-ELPIIITGSEDGTV 253
Query: 125 KIW 127
+IW
Sbjct: 254 RIW 256
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELP-IIITGSEDGTVRIWHA 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+V + +++ +V K+ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNP-QSSLVVSGSFDESVRIWDVRT 194
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145
G+C+ H + V +V F+ D I S D V+IW K+ +
Sbjct: 195 GMCVKTLP---AHSDPVSAVSFN-RDGSLITSGSYDGLVRIWDTANGQCV--KTLVDDEN 248
Query: 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205
P P +V+F G +ILS ++DN + LW+ G
Sbjct: 249 P---PVAFVKFSPN---------------GKYILSSNLDNTLKLWD---------FGKGK 281
Query: 206 ILQKYPVPECDIWFIKFSCDFHYNAAA---IGNREGKIFVWELQS 247
L++Y E + + I +F G+ + KI+VW LQ+
Sbjct: 282 TLKQYQGHENNKYCI--FANFSVTGGKWIISGSEDCKIYVWNLQT 324
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 47/199 (23%)
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156
GH + +V F P + + + D TVKIW+M + E++ T
Sbjct: 77 GHTKSISAVKFSPCGKF-LGTSSADKTVKIWNMSDL--SCERTLTG-------------- 119
Query: 157 PVFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWE-PKMKEQSPGEGTADILQKYPVP 213
H V+ W D I++ S D + ++E P +K +G + +
Sbjct: 120 -------HKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYV------ 166
Query: 214 ECDIWFIKFSCDFHYNAAAI--GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS 271
F C+F+ ++ + G+ + + +W++++ + + A S P+ + +
Sbjct: 167 --------FCCNFNPQSSLVVSGSFDESVRIWDVRTG---MCVKTLPAHS-DPVSAVSFN 214
Query: 272 YDGSTILSCCEDGAIWRWD 290
DGS I S DG + WD
Sbjct: 215 RDGSLITSGSYDGLVRIWD 233
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 67 SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 126
+ VSAS D S+RLWN+Q G C F GH +VLSV F P D +I S G DN +++
Sbjct: 80 NFAVSASWDHSLRLWNLQNGQCQYKFL---GHTKDVLSVAFSP-DNRQIVSGGRDNALRV 135
Query: 127 WSMKEFWTYVEKSFTWTDLPS--KFPTKYVQFPVFIAS---------------------V 163
W++K + TD S +F + + PV ++
Sbjct: 136 WNVKGECMHTLSRGAHTDWVSCVRF-SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKG 194
Query: 164 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 223
H+NYV D L S D + V ++ + + GE +++ P+ + I FS
Sbjct: 195 HTNYVTSVTVSPDGSLCASSDKDGV---ARLWDLTKGEALSEMAAGAPINQ-----ICFS 246
Query: 224 CDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQ---TAMSYDGSTILSC 280
+ ++ AA E I +++L++ ++ H SK + + A S DGST+ S
Sbjct: 247 PNRYWMCAAT---EKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSG 303
Query: 281 CEDGAIWRW 289
D I W
Sbjct: 304 YTDNVIRVW 312
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 7 KEESFYTVSWACNVDGI-----------PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS 55
K E +T+S + D + P +V+GG + +++V D++ +L GH +
Sbjct: 139 KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNY 198
Query: 56 INEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI 115
+ + P SL S+ KD RLW++ G + A AG N++ F P+ +
Sbjct: 199 VTSVTVSP-DGSLCASSDKDGVARLWDLTKGEALSEMA-AGAPINQIC---FSPNRYWMC 253
Query: 116 AS 117
A+
Sbjct: 254 AA 255
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 67 SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 126
+ VSAS D S+RLWN+Q G C F GH +VLSV F P D +I S G DN +++
Sbjct: 80 NFAVSASWDHSLRLWNLQNGQCQYKFL---GHTKDVLSVAFSP-DNRQIVSGGRDNALRV 135
Query: 127 WSMKEFWTYVEKSFTWTDLPS--KFPTKYVQFPVFIAS---------------------V 163
W++K + TD S +F + + PV ++
Sbjct: 136 WNVKGECMHTLSRGAHTDWVSCVRF-SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKG 194
Query: 164 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 223
H+NYV D L S D + V ++ + + GE +++ P+ + I FS
Sbjct: 195 HTNYVTSVTVSPDGSLCASSDKDGV---ARLWDLTKGEALSEMAAGAPINQ-----ICFS 246
Query: 224 CDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQ---TAMSYDGSTILSC 280
+ ++ AA E I +++L++ ++ H SK + + A S DGST+ S
Sbjct: 247 PNRYWMCAAT---EKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSG 303
Query: 281 CEDGAIWRW 289
D I W
Sbjct: 304 YTDNVIRVW 312
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 7 KEESFYTVSWACNVDGI-----------PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS 55
K E +T+S + D + P +V+GG + +++V D++ +L GH +
Sbjct: 139 KGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNY 198
Query: 56 INEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI 115
+ + P SL S+ KD RLW++ G + A AG N++ F P+ +
Sbjct: 199 VTSVTVSP-DGSLCASSDKDGVARLWDLTKGEALSEMA-AGAPINQIC---FSPNRYWMC 253
Query: 116 AS 117
A+
Sbjct: 254 AA 255
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P P V+S+S D ++LW+
Sbjct: 72 VVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWDK 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G +C IF G H + V+ V F+P D AS +D T KIWS+
Sbjct: 131 GWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTTKIWSL 172
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +I+ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPELP-IIITGSEDGTVRIWHS 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P V+GG + I+V + N + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVSVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+ +G I+G I++ D ++ ++ GHG + + P V S S D+++++W+ +
Sbjct: 1150 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDKTIKIWDTAS 1208
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
G C G GG V SV F P D R+AS DNT+KIW
Sbjct: 1209 GTCTQTLEGHGGW---VQSVAFSP-DGQRVASGSSDNTIKIW 1246
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 105/267 (39%), Gaps = 43/267 (16%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+ +G + I++ D ++ ++ GHG S+ + P V S S D+++++W+ +
Sbjct: 940 VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSP-DGQRVASGSGDKTIKIWDTAS 998
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145
G C G GG V SV F P D R+AS D T+KIW S T T
Sbjct: 999 GTCTQTLEGHGG---SVWSVAFSP-DGQRVASGSDDKTIKIWDTA--------SGTCTQT 1046
Query: 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPG-EGTA 204
+VQ VF G + S S D+ I +W+ + EG
Sbjct: 1047 LEGHG-GWVQSVVFSPD------------GQRVASGSDDHTIKIWDAVSGTCTQTLEGHG 1093
Query: 205 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSP 264
D +W + FS D A+ G+ +G I +W+ S H
Sbjct: 1094 D----------SVWSVAFSPDGQRVAS--GSIDGTIKIWDAASGTCTQTLE-GHG---GW 1137
Query: 265 IRQTAMSYDGSTILSCCEDGAIWRWDA 291
+ A S DG + S DG I WDA
Sbjct: 1138 VHSVAFSPDGQRVASGSIDGTIKIWDA 1164
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+ +G + I++ D ++ ++ GHG + + P V S S D ++++W+ +
Sbjct: 898 VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVASGSDDHTIKIWDAAS 956
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
G C GH + VLSV F P D R+AS D T+KIW
Sbjct: 957 GTCTQTLE---GHGSSVLSVAFSP-DGQRVASGSGDKTIKIW 994
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 14 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 73
+S A + DG + +G + I++ D ++ ++ GHG S+ + P + V S S
Sbjct: 845 LSVAFSADG-QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRER-VASGS 902
Query: 74 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
D+++++W+ +G C G GG V SV F P D R+AS D+T+KIW
Sbjct: 903 DDKTIKIWDAASGTCTQTLEGHGGR---VQSVAFSP-DGQRVASGSDDHTIKIW 952
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+ +G + I++ D ++ ++ GHG + + P V S S D ++++W+ +
Sbjct: 1192 VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIWDTAS 1250
Query: 86 GIC 88
G C
Sbjct: 1251 GTC 1253
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 15 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 74
S A N DG L +G + +R+ ++S+ K +F GH ++ + P +++ S S
Sbjct: 1289 SVAFNPDG-SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP-DGTMLASGSD 1346
Query: 75 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
D++VRLW++ +G C+ F GH N V SV F P D +AS D TV++WS+
Sbjct: 1347 DQTVRLWSISSGECLYTFL---GHTNWVGSVIFSP-DGAILASGSGDQTVRLWSI 1397
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
L +G + +R+ D+S+ + K+F GH + + P ++ S S D++VRLW++
Sbjct: 920 MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP-NSLMLASGSSDQTVRLWDIS 978
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
+G C+ IF GH V SV F+ D +A+ D TV++W +
Sbjct: 979 SGECLYIFQ---GHTGWVYSVAFNL-DGSMLATGSGDQTVRLWDI 1019
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
L +G + +R+ +S+ K + GH + + I P +L+ S S D++VRLWN+ +
Sbjct: 1383 LASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISS 1441
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
G C+ GH N V SV F SD +AS D T+K+W +K
Sbjct: 1442 GECLYTLH---GHINSVRSVAF-SSDGLILASGSDDETIKLWDVK 1482
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 78
N DG L +G + +R+ ++++ K +F GH +N + P S++ S S D++V
Sbjct: 1209 NPDG-STLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTV 1266
Query: 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
RLW++ + C+ F GH N V SV F+P D +AS D TV++W +
Sbjct: 1267 RLWDISSSKCLHTFQ---GHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEI 1313
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
L G + I+R+ D+S++K + GH + +N + P +L S S D++VRLW++ +
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISS 1189
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
C+ I GH + V SV F+P D +AS D TV++W +
Sbjct: 1190 SKCLYILQ---GHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEI 1229
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 15 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 74
S A N+DG L G + +R+ D+S+ + F GH + + +++ S S
Sbjct: 995 SVAFNLDG-SMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS-DGAMLASGSD 1052
Query: 75 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
D++VRLW++ +G C+ GH + V SV F P D +AS G D V++W +
Sbjct: 1053 DQTVRLWDISSGNCLYTLQ---GHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDI 1103
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 14 VSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 70
SW +V P L +G + +R+ +S+ + +F+GH + + + P +++
Sbjct: 1326 TSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP-DGAILA 1384
Query: 71 SASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
S S D++VRLW++ +G C+ GH N V S+ F P D +AS D TV++W++
Sbjct: 1385 SGSGDQTVRLWSISSGKCLYTLQ---GHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNI 1439
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 11 FYTVSWACN-VDGIPF------LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 63
YT+ N V+ + F L +G + +R+ D+S+ K GH +N + P
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP 1210
Query: 64 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 123
S + S S D++VRLW + + C+ F GH + V SV F+P D +AS D T
Sbjct: 1211 -DGSTLASGSSDQTVRLWEINSSKCLCTFQ---GHTSWVNSVVFNP-DGSMLASGSSDKT 1265
Query: 124 VKIWSM 129
V++W +
Sbjct: 1266 VRLWDI 1271
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
L +G + +R+ D+S+ + F GH + + L S++ + S D++VRLW++
Sbjct: 962 MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDIS 1020
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
+ C IF GH + V SV F SD +AS D TV++W +
Sbjct: 1021 SSQCFYIFQ---GHTSCVRSVVF-SSDGAMLASGSDDQTVRLWDI 1061
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
L +G + +R+ D+S+ + GH + + P +++ S D+ VRLW++
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDI 1103
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
+G C+ G+ + V + F P+ + +A+ D V++W +
Sbjct: 1104 SSGNCLYTLQ---GYTSWVRFLVFSPNGV-TLANGSSDQIVRLWDI 1145
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWN 82
L +G + +R+ ++S+ + + GH IN +R+ ++ S S DE+++LW+
Sbjct: 1424 LLASGSDDQTVRLWNISSGECLYTLHGH---INSVRSVAFSSDGLILASGSDDETIKLWD 1480
Query: 83 VQTGICI 89
V+TG CI
Sbjct: 1481 VKTGECI 1487
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWEK 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 131 GWACTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P V+GG + I+V + + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW 122
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
Q+ CI + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCISVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWEN 130
Query: 86 G-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 131 GWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Query: 84 QT 85
T
Sbjct: 259 TT 260
>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2
Length = 1322
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 12 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 71
+ V W+ +GI L +G +G +R+ D + + GH + + P L++S
Sbjct: 570 FHVKWSPLREGI--LCSGSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLIS 627
Query: 72 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 131
S D ++++W+ + G C+ G +V + HPS + +ASC D+TV++WS+
Sbjct: 628 GSWDYTIKVWDTREGTCVDTVYDHGA---DVYGLTCHPSRPFTMASCSRDSTVRLWSLTA 684
Query: 132 FWTYVE 137
T V+
Sbjct: 685 LVTPVQ 690
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 50 VGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 109
+GH ++I + + +P P+L+ +AS D ++++W++ T + G G + S+ + P
Sbjct: 390 LGHVETIFDCKFKPDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEG---VIYSLSWAP 446
Query: 110 SDIYRIASCGMDNTVKIWSMKE 131
+ IA N IW++++
Sbjct: 447 GGLNCIAGGTSRNGAFIWNVQK 468
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 51/271 (18%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS----------------- 389
Query: 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205
T +F V + H + C ++ ++S S DN I LW+ +
Sbjct: 390 -----TSTCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE---------CGA 434
Query: 206 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS------PPVLIARLSHA 259
L+ E + I+F G +GKI VW+LQ++ L R
Sbjct: 435 CLRVLEGHEELVRCIRFD----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE 490
Query: 260 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290
S R + +D I+S D I WD
Sbjct: 491 HSGRVFR---LQFDEFQIISSSHDDTILIWD 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
++V+ + I+V S + ++ GH I ++ + LVVS S D ++RLW+++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIE 431
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
G C+ + GH V + F D RI S D +K+W ++
Sbjct: 432 CGACLRVLE---GHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQ 471
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 51/271 (18%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS----------------- 389
Query: 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205
T +F V + H + C ++ ++S S DN I LW+ +
Sbjct: 390 -----TSTCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE---------CGA 434
Query: 206 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS------PPVLIARLSHA 259
L+ E + I+F G +GKI VW+LQ++ L R
Sbjct: 435 CLRVLEGHEELVRCIRFD----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE 490
Query: 260 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290
S R + +D I+S D I WD
Sbjct: 491 HSGRVFR---LQFDEFQIISSSHDDTILIWD 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
++V+ + I+V S + ++ GH I ++ + LVVS S D ++RLW+++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIE 431
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
G C+ + GH V + F D RI S D +K+W ++
Sbjct: 432 CGACLRVLE---GHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQ 471
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 21 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESV 78
DG F+ A + ++V +K S H IN +R P L+VSAS D++V
Sbjct: 114 DGQSFVTASD-DKTVKVWSTHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDDKTV 169
Query: 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 170 KLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 83
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 143
+ + H V SV F SD + D TVK+WS
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSFVTASDDKTVKVWSTHR------------ 134
Query: 144 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 196
KF +F S H N+V C ++ G I+S S D + LW+ +E
Sbjct: 135 ---QKF--------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 41/196 (20%)
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156
GHR+ V SVDF + ++AS MD+ + +W MK Q
Sbjct: 17 GHRDAVTSVDF-SLNTKQLASGSMDSCLMVWHMKP-----------------------QT 52
Query: 157 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 214
+ + H + V C + G + S S D + +W P +K GE T +
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK----GESTV-----FRAHT 103
Query: 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274
+ + F D A ++ K++ Q S +Q + +R S DG
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQK------FLFSLSQHINWVRCAKFSPDG 157
Query: 275 STILSCCEDGAIWRWD 290
I+S +D + WD
Sbjct: 158 RLIVSASDDKTVKLWD 173
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 21 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESV 78
DG F+ A + ++V +K S H IN +R P L+VSAS D++V
Sbjct: 114 DGQSFVTASD-DKTVKVWATHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDDKTV 169
Query: 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 170 KLWDKSSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 83
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 143
+ + H V SV F SD + D TVK+W+
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSFVTASDDKTVKVWATHR------------ 134
Query: 144 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 196
KF +F S H N+V C ++ G I+S S D + LW+ +E
Sbjct: 135 ---QKF--------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 41/196 (20%)
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156
GHR+ V VDF + ++AS MD+ + +W MK Q
Sbjct: 17 GHRDAVTCVDF-SINTKQLASGSMDSCLMVWHMKP-----------------------QS 52
Query: 157 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 214
+ + H + V C + G + S S D + +W P +K GE T +
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK----GESTV-----FRAHT 103
Query: 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274
+ + F D A ++ K++ Q S +Q + +R S DG
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK------FLFSLSQHINWVRCAKFSPDG 157
Query: 275 STILSCCEDGAIWRWD 290
I+S +D + WD
Sbjct: 158 RLIVSASDDKTVKLWD 173
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+V+ + +++ ++ ++ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKT 202
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145
G+CI H + V +V F+ D IAS D V+IW K+ +
Sbjct: 203 GMCIKTLP---AHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCI--KTLVDDEN 256
Query: 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205
P P +V+F G +IL+ ++D+ + LW+ K ++ + T
Sbjct: 257 P---PVAFVKFSPN---------------GKYILASNLDSTLKLWD-FSKGKTLKQYTGH 297
Query: 206 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 247
KY + F FS + G+ + KI++W LQ+
Sbjct: 298 ENSKYCI------FANFSVTGGKWIIS-GSEDCKIYIWNLQT 332
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 44/251 (17%)
Query: 42 NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNE 101
N KL + GH SI+ + P L S S D++V++WN+ IC GH+
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTS-SADKTVKIWNMDHMICERTLT---GHKLG 131
Query: 102 VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161
V + + SD + S D T+KI+ + V T T
Sbjct: 132 VNDIAWS-SDSRCVVSASDDKTLKIFEI------VTSRMTKT-----------------L 167
Query: 162 SVHSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 219
H+NYV C + ++S S D + +W+ K T ++ P +
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK---------TGMCIKTLPAHSDPVSA 218
Query: 220 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 279
+ F+ D A+ G+ +G + +W+ + I L ++ P+ S +G IL+
Sbjct: 219 VSFNRDGSLIAS--GSYDGLVRIWDTANG--QCIKTLVDDENP-PVAFVKFSPNGKYILA 273
Query: 280 CCEDGAIWRWD 290
D + WD
Sbjct: 274 SNLDSTLKLWD 284
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNV 83
LV + ++V ++ S H IN +R P L+VSAS D++V+LW+
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
+ CI + GG V VDFHPS IA+ GMDNTVK+W +
Sbjct: 175 TSRECIHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDAR 217
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 83
L +G ++ + + + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 143
+ + H V SV F SD + + D TVK+WS
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSLVTASDDKTVKVWST-------------- 132
Query: 144 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 196
+ Q +F + H N+V C ++ G I+S S D + LW+ +E
Sbjct: 133 ---------HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 71/196 (36%), Gaps = 41/196 (20%)
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156
GHR+ V VDF + +AS MD+T+ IW MK Q
Sbjct: 17 GHRDAVTCVDF-SLNTKHLASGSMDSTLMIWHMKP-----------------------QS 52
Query: 157 PVFIASVHSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 214
+ + H + V C + G + S S D + +W P +K GE T +
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK----GESTV-----FRAHT 103
Query: 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274
+ + F D A ++ K++ Q S Q + +R S DG
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQR------FLFSLTQHINWVRCAKFSPDG 157
Query: 275 STILSCCEDGAIWRWD 290
I+S +D + WD
Sbjct: 158 RLIVSASDDKTVKLWD 173
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 44/242 (18%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
FL G + +IR+ D+ N K+ GH I + P LV S S D +VR+W+++
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLR 515
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144
TG C L + G V +V P D IA+ +D V++W E F
Sbjct: 516 TGQCSLTLSIEDG----VTTVAVSPGDGKYIAAGSLDRAVRVWDS-------ETGFLVER 564
Query: 145 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLW-----EPKMKEQSP 199
L S+ + + V + G ++S S+D + LW K ++P
Sbjct: 565 LDSENESGTGHKDSVYSVVFTRD-------GQSVVSGSLDRSVKLWNLQNANNKSDSKTP 617
Query: 200 GEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--------GNREGKIFVWELQSSPPV 251
GT C++ +I DF + A G+++ + W+ +S P+
Sbjct: 618 NSGT-----------CEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 665
Query: 252 LI 253
L+
Sbjct: 666 LM 667
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 67
E+ Y++ + + D LV+G + +R+ D+ + + D + + P
Sbjct: 485 EQDIYSLDYFPSGDK---LVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGK 540
Query: 68 LVVSASKDESVRLWNVQTGICILIF----AGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 123
+ + S D +VR+W+ +TG + GH++ V SV F D + S +D +
Sbjct: 541 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVSGSLDRS 599
Query: 124 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV 183
VK+W+++ KS + T Y+ F+ SV + D ++ILS S
Sbjct: 600 VKLWNLQNANN---KSDSKTPNSGTCEVTYIGHKDFVLSVATTQND------EYILSGSK 650
Query: 184 DNEIVLWEPK 193
D ++ W+ K
Sbjct: 651 DRGVLFWDKK 660
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 48 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 105
+++GH D + + T ++S SKD V W+ ++G +L+ GHRN V+SV
Sbjct: 625 TYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVISV 678
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 6 QKEESF-----YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 60
+KE S + +S A + DG +L +G I+GII + D++ KL + GH I +
Sbjct: 139 KKEHSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 61 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM 120
P L+V+AS D +++++VQ + GH + VLSV F P D + ++S
Sbjct: 198 FSP-DSQLLVTASDDGYIKIYDVQHANLAGTLS---GHGSWVLSVAFSPDDTHFVSSSS- 252
Query: 121 DNTVKIW 127
D ++K+W
Sbjct: 253 DKSIKVW 259
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
LV +G I++ DV + L + GHG + + P + VS+S D+S+++W+
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSP-DDTHFVSSSSDKSIKVWDTS 262
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
+ C+ F H+++V SV ++P+ +I S G D + I+
Sbjct: 263 SRSCVNTFF---DHQDQVWSVKYNPTG-SKIVSAGDDRAIHIY 301
Score = 38.1 bits (87), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 8 EESFYTVSWA-CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQ-PLK 65
E++ +T +W DG +V G ++ +++V S+EKL + G + +
Sbjct: 16 EDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQN 75
Query: 66 PSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA 116
++ S+S D +RLW+++TG ++ S+D P D + +A
Sbjct: 76 GAIAASSSLDAHIRLWDLETG-------------KQIKSMDAGPVDAWTVA 113
>sp|Q5R650|WDR37_PONAB WD repeat-containing protein 37 OS=Pongo abelii GN=WDR37 PE=2 SV=1
Length = 495
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 44 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 103
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 104 SVDFHPSDIYRIASCGMDNTVKIW 127
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 39 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 96
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 310 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 365
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 132
GH + V S F D + S D TVK+W +K
Sbjct: 366 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 399
>sp|Q9Y2I8|WDR37_HUMAN WD repeat-containing protein 37 OS=Homo sapiens GN=WDR37 PE=2 SV=2
Length = 494
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 44 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 103
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 104 SVDFHPSDIYRIASCGMDNTVKIW 127
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 39 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 96
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 309 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 364
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 132
GH + V S F D + S D TVK+W +K
Sbjct: 365 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 398
>sp|P93107|PF20_CHLRE Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas
reinhardtii GN=PF20 PE=2 SV=1
Length = 606
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 45 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104
L+K+F GH S+ + P KP L V+AS D++ ++W++ G I+ GH++ V
Sbjct: 318 LNKTFKGHLLSVANLALHPTKPIL-VTASDDKTWKMWHMPGGDLIMC---GEGHKDWVAG 373
Query: 105 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164
VDFHP+ +AS G D+ VKIW ++ + T + I SV
Sbjct: 374 VDFHPAGTC-LASGGGDSAVKIWDFEK---------------QRCVTTFTDHKQAIWSVR 417
Query: 165 SNYVDCNRWLGDFILSKSVDNEIVLWE 191
++ LG+ + S S+D+ + LW+
Sbjct: 418 FHH------LGEVVASGSLDHTVRLWD 438
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+ +G ++ +R+ D+ K + GH DS+N++ QP SL +AS D++V +W+ +
Sbjct: 425 VASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSSL-ATASSDKTVSVWDARA 483
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
G+C + GH+N V F+ ++AS D VK+W +
Sbjct: 484 GLCTQTYY---GHQNSCNGVSFNILGT-QLASTDADGVVKLWDTR 524
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 16 WACNVDGIPF---LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA 72
W VD P L +GG + +++ D ++ +F H +I +R L +V S
Sbjct: 370 WVAGVDFHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLG-EVVASG 428
Query: 73 SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
S D +VRLW++ G C + G N++ F S +A+ D TV +W +
Sbjct: 429 SLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSS----LATASSDKTVSVWDAR 482
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 68 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127
++ A D V+ ++ G+ + A GH + V +V F P+ Y + SCG DNT ++W
Sbjct: 550 VLAVACDDGKVKAYSTTDGV---LQAELAGHEDAVQAVLFDPAGQY-LVSCGSDNTFRLW 605
Query: 128 S 128
S
Sbjct: 606 S 606
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 49 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 108
GH + IN +R PL S++VSAS+D ++R+W+ +G GH N V +DF
Sbjct: 100 LTGHRNCINAVRFHPL-FSVIVSASEDATMRIWDFDSGDFERTLK---GHTNAVQDIDFD 155
Query: 109 PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168
S +ASC D T+K+W + F + H + V
Sbjct: 156 KSGNL-LASCSADLTIKLWDFQSFDC-----------------------IKTLHGHDHNV 191
Query: 169 DCNRWL--GDFILSKSVDNEIVLWE 191
C R+L GD ++S S D I +WE
Sbjct: 192 SCVRFLPSGDQLVSSSRDKSIKVWE 216
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84
+L G + I++ +++ + ++++GH + + I+ P L+ S D+S+R+W++
Sbjct: 316 YLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPCGKYLI-SVGDDKSIRVWDIA 374
Query: 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
G CI A H + + +DF + + IA+ G+D+ +KIW +
Sbjct: 375 QGRCIKTINEA--HSHFISCLDFCSHNPH-IATGGVDDIIKIWKL 416
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 47 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 106
K+ GH +++ +R P LV S+S+D+S+++W TG C GH + V V
Sbjct: 182 KTLHGHDHNVSCVRFLPSGDQLV-SSSRDKSIKVWETATGYCTKTLT---GHEDWVRKV- 236
Query: 107 FHPSDIYRIASCGMDNTVKIWSMKE---FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163
D +ASC D T ++W++ + T+ E S + + P V+ P + S
Sbjct: 237 IVSEDGTTLASCSNDQTARVWNLAKGECLLTFREHSHV-VECLAYSPANIVEVPGSLLST 295
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85
+V+ + +R+ D + ++ GH +++ +I +L+ S S D +++LW+ Q+
Sbjct: 119 IVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDK-SGNLLASCSADLTIKLWDFQS 177
Query: 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 141
CI GH + V V F PS ++ S D ++K+W Y K+ T
Sbjct: 178 FDCIKTLH---GHDHNVSCVRFLPSG-DQLVSSSRDKSIKVWETAT--GYCTKTLT 227
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P V+GG + I+V + + + GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVAVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 24 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83
P V+GG + I+V + + + GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 129
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVAVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 45 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104
L + F GH D++ + P L S S D + +WN++ + F G H++ +LS
Sbjct: 10 LERHFKGHRDTVTTVDFNPNTKQLA-SGSMDSCLMIWNMKPQMRAYRFVG---HKDAILS 65
Query: 105 VDFHPSDIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWT------------------D 144
VDF PS + IAS D TV++W S+K T V K+ T T D
Sbjct: 66 VDFSPSG-HLIASASRDKTVRLWVPSVKGEST-VFKAHTGTVRSVSFSGDGQSLVTASDD 123
Query: 145 LPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 196
K T + Q +F + H N+V C ++ G I+S S D I LW+ +E
Sbjct: 124 KTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRE 177
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNV 83
LV + I+V V +K S H IN +R P L+VSAS D++++LW+
Sbjct: 117 LVTASDDKTIKVWTVHRQKFLFSLNQH---INWVRCAKFSPDGRLIVSASDDKTIKLWDK 173
Query: 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130
+ CI F GG N VDFHPS IA+ DNTVK+W ++
Sbjct: 174 TSRECIHSFCEHGGFVN---FVDFHPSGTC-IAAAATDNTVKVWDIR 216
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 77/194 (39%), Gaps = 37/194 (19%)
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156
GHR+ V +VDF+P + ++AS MD+ + IW+MK P ++V
Sbjct: 16 GHRDTVTTVDFNP-NTKQLASGSMDSCLMIWNMK---------------PQMRAYRFVGH 59
Query: 157 PVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECD 216
I SV + G I S S D + LW P +K GE T +
Sbjct: 60 KDAILSVDFSPS------GHLIASASRDKTVRLWVPSVK----GESTV-----FKAHTGT 104
Query: 217 IWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGST 276
+ + FS D A ++ I VW + + S Q + +R S DG
Sbjct: 105 VRSVSFSGDGQSLVTASDDK--TIKVWTVHRQKFLF----SLNQHINWVRCAKFSPDGRL 158
Query: 277 ILSCCEDGAIWRWD 290
I+S +D I WD
Sbjct: 159 IVSASDDKTIKLWD 172
>sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 OS=Mus musculus GN=Wdr37 PE=2 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 44 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 103
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 104 SVDFHPSDIYRIASCGMDNTVKIW 127
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 39 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 96
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 311 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 366
Query: 97 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 132
GH + V S F D + S D TVK+W +K
Sbjct: 367 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 400
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 37/250 (14%)
Query: 14 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 73
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 74 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 133
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLP---AHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-- 202
Query: 134 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPK 193
K+ D P P +V+F G +IL+ ++DN + LW+
Sbjct: 203 GQCLKTLIDDDNP---PVSFVKFSPN---------------GKYILAATLDNTLKLWD-Y 243
Query: 194 MKEQSPGEGTADILQKYPV-----PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 248
K + T +KY + W + S D N I N + K V +LQ
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---NLVYIWNLQTKEIVQKLQGH 300
Query: 249 PPVLIARLSH 258
V+I+ H
Sbjct: 301 TDVVISTACH 310
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,839,282
Number of Sequences: 539616
Number of extensions: 4716977
Number of successful extensions: 17048
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 796
Number of HSP's that attempted gapping in prelim test: 11150
Number of HSP's gapped (non-prelim): 4971
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)