Query 022590
Match_columns 294
No_of_seqs 673 out of 1087
Neff 12.3
Searched_HMMs 29240
Date Mon Mar 25 07:56:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022590.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022590hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.6E-49 5.5E-54 303.5 33.4 249 3-293 8-259 (304)
2 4gqb_B Methylosome protein 50; 100.0 8.6E-49 2.9E-53 303.4 33.6 242 6-293 80-331 (344)
3 1vyh_C Platelet-activating fac 100.0 1.9E-48 6.4E-53 309.3 32.6 247 3-293 103-369 (410)
4 1vyh_C Platelet-activating fac 100.0 9.4E-48 3.2E-52 305.3 32.6 244 3-292 145-410 (410)
5 3ow8_A WD repeat-containing pr 100.0 3.7E-47 1.3E-51 292.2 33.0 243 4-292 76-320 (321)
6 2pm7_B Protein transport prote 100.0 8E-47 2.7E-51 287.7 33.2 260 2-293 3-285 (297)
7 3ow8_A WD repeat-containing pr 100.0 9.2E-47 3.2E-51 290.0 32.8 246 4-293 28-279 (321)
8 3frx_A Guanine nucleotide-bind 100.0 1.2E-46 4.1E-51 289.4 32.8 249 3-293 12-317 (319)
9 1got_B GT-beta; complex (GTP-b 100.0 4.4E-46 1.5E-50 288.9 34.8 245 4-293 51-301 (340)
10 4g56_B MGC81050 protein; prote 100.0 1.1E-46 3.6E-51 293.9 29.7 244 6-293 92-343 (357)
11 3iz6_a 40S ribosomal protein R 100.0 2.1E-46 7.1E-51 294.9 30.9 254 4-293 62-375 (380)
12 3bg1_A Protein SEC13 homolog; 100.0 3.5E-46 1.2E-50 286.5 26.9 255 4-292 9-292 (316)
13 2pbi_B Guanine nucleotide-bind 100.0 5E-45 1.7E-49 284.2 33.4 246 4-293 60-315 (354)
14 1got_B GT-beta; complex (GTP-b 100.0 5.9E-45 2E-49 282.6 32.8 239 5-290 94-340 (340)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-44 4.7E-49 281.0 34.2 261 5-293 58-335 (345)
16 2ynn_A Coatomer subunit beta'; 100.0 2E-44 6.8E-49 275.4 32.6 245 4-293 51-302 (304)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-44 3.9E-49 281.4 30.5 253 3-293 10-283 (345)
18 2hes_X YDR267CP; beta-propelle 100.0 1.2E-44 4.2E-49 279.6 29.7 253 7-293 57-328 (330)
19 4ery_A WD repeat-containing pr 100.0 1.4E-43 4.6E-48 272.0 34.4 244 4-293 19-268 (312)
20 3k26_A Polycomb protein EED; W 100.0 9.5E-45 3.3E-49 284.4 28.5 286 6-293 67-366 (366)
21 1erj_A Transcriptional repress 100.0 7.7E-44 2.6E-48 281.5 33.9 254 10-293 125-389 (393)
22 2xzm_R RACK1; ribosome, transl 100.0 6.7E-44 2.3E-48 277.0 32.9 248 4-293 72-340 (343)
23 4gqb_B Methylosome protein 50; 100.0 1.9E-44 6.5E-49 279.1 29.3 244 6-293 28-289 (344)
24 2pbi_B Guanine nucleotide-bind 100.0 1.3E-43 4.4E-48 276.3 33.0 240 6-290 104-354 (354)
25 2hes_X YDR267CP; beta-propelle 100.0 1.3E-43 4.4E-48 273.9 31.3 252 3-292 9-279 (330)
26 3jrp_A Fusion protein of prote 100.0 9E-44 3.1E-48 280.1 30.9 255 2-292 5-286 (379)
27 2xzm_R RACK1; ribosome, transl 100.0 4.3E-43 1.5E-47 272.5 33.2 247 3-293 16-285 (343)
28 4g56_B MGC81050 protein; prote 100.0 6.4E-44 2.2E-48 278.2 28.4 247 6-293 40-301 (357)
29 1nr0_A Actin interacting prote 100.0 3.1E-43 1.1E-47 292.7 31.7 248 3-293 54-355 (611)
30 4aow_A Guanine nucleotide-bind 100.0 2E-42 6.9E-47 268.6 33.2 250 3-293 33-337 (340)
31 1nr0_A Actin interacting prote 100.0 5.6E-43 1.9E-47 291.2 32.0 273 4-293 186-567 (611)
32 1erj_A Transcriptional repress 100.0 1.6E-42 5.6E-47 274.0 32.5 244 6-293 62-341 (393)
33 4ery_A WD repeat-containing pr 100.0 1.3E-41 4.4E-46 261.0 34.6 244 4-292 61-311 (312)
34 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-42 9.9E-47 268.4 30.4 265 3-293 6-337 (351)
35 3zwl_B Eukaryotic translation 100.0 3E-41 1E-45 264.7 34.6 259 4-293 28-346 (369)
36 2ymu_A WD-40 repeat protein; u 100.0 3.3E-41 1.1E-45 279.5 33.6 236 4-290 340-577 (577)
37 4e54_B DNA damage-binding prot 100.0 3.2E-42 1.1E-46 275.9 26.2 251 6-293 117-430 (435)
38 4aez_A CDC20, WD repeat-contai 100.0 1.1E-40 3.6E-45 264.5 33.3 241 6-293 132-380 (401)
39 3dwl_C Actin-related protein 2 100.0 1.9E-42 6.5E-47 272.5 22.9 255 6-292 9-280 (377)
40 3dm0_A Maltose-binding peripla 100.0 3.7E-41 1.3E-45 284.4 32.0 246 4-293 378-632 (694)
41 3ei3_B DNA damage-binding prot 100.0 1.8E-40 6.1E-45 261.8 33.6 253 4-294 69-383 (383)
42 3dm0_A Maltose-binding peripla 100.0 4.3E-41 1.5E-45 284.1 31.8 249 4-292 426-692 (694)
43 3jro_A Fusion protein of prote 100.0 1.1E-41 3.7E-46 289.3 27.6 256 2-293 3-285 (753)
44 4a11_B DNA excision repair pro 100.0 3.3E-40 1.1E-44 262.2 34.1 258 4-293 39-365 (408)
45 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-40 3.9E-45 261.9 31.1 258 4-293 4-274 (372)
46 2pm9_A Protein WEB1, protein t 100.0 3E-41 1E-45 269.0 26.3 248 6-293 65-337 (416)
47 2xyi_A Probable histone-bindin 100.0 1.6E-40 5.5E-45 265.6 30.2 252 6-292 126-409 (430)
48 1gxr_A ESG1, transducin-like e 100.0 1.1E-39 3.6E-44 252.9 33.9 239 6-293 49-296 (337)
49 2ymu_A WD-40 repeat protein; u 100.0 3.2E-40 1.1E-44 273.6 32.9 263 3-292 11-292 (577)
50 3vl1_A 26S proteasome regulato 100.0 2.9E-40 9.8E-45 263.7 31.4 261 10-293 98-365 (420)
51 1gxr_A ESG1, transducin-like e 100.0 1.6E-39 5.3E-44 252.0 34.5 238 6-292 95-336 (337)
52 3v7d_B Cell division control p 100.0 5E-40 1.7E-44 265.6 32.1 263 4-293 117-381 (464)
53 4gga_A P55CDC, cell division c 100.0 1.2E-39 4E-44 260.0 33.0 247 4-293 143-395 (420)
54 1sq9_A Antiviral protein SKI8; 100.0 3.5E-40 1.2E-44 261.3 29.5 246 4-293 12-322 (397)
55 3mkq_A Coatomer beta'-subunit; 100.0 5.4E-40 1.8E-44 282.4 32.6 248 3-293 8-259 (814)
56 4h5i_A Guanine nucleotide-exch 100.0 6.9E-40 2.4E-44 256.1 29.6 201 55-293 135-343 (365)
57 3dw8_B Serine/threonine-protei 100.0 4.9E-40 1.7E-44 264.4 29.5 255 6-293 26-373 (447)
58 1sq9_A Antiviral protein SKI8; 100.0 2.5E-40 8.5E-45 262.2 27.4 250 4-293 58-395 (397)
59 3k26_A Polycomb protein EED; W 100.0 1.3E-40 4.5E-45 260.8 25.1 256 5-293 15-318 (366)
60 1k8k_C P40, ARP2/3 complex 41 100.0 7.9E-40 2.7E-44 257.0 29.6 266 4-293 48-361 (372)
61 2j04_B YDR362CP, TAU91; beta p 100.0 2E-40 6.8E-45 268.7 26.7 248 5-293 204-517 (524)
62 2j04_B YDR362CP, TAU91; beta p 100.0 4E-41 1.4E-45 272.7 22.4 244 7-292 132-427 (524)
63 2pm9_A Protein WEB1, protein t 100.0 4.3E-41 1.5E-45 268.1 21.9 256 4-294 109-415 (416)
64 3i2n_A WD repeat-containing pr 100.0 3.7E-40 1.3E-44 257.5 26.3 252 6-293 63-353 (357)
65 3i2n_A WD repeat-containing pr 100.0 5.7E-40 2E-44 256.4 27.3 249 5-293 15-291 (357)
66 1r5m_A SIR4-interacting protei 100.0 2.5E-39 8.4E-44 258.5 31.4 244 7-292 107-424 (425)
67 2aq5_A Coronin-1A; WD40 repeat 100.0 9.9E-40 3.4E-44 259.1 28.3 248 3-293 76-342 (402)
68 3dwl_C Actin-related protein 2 100.0 4E-40 1.4E-44 259.3 25.2 266 3-291 50-377 (377)
69 1yfq_A Cell cycle arrest prote 100.0 5.1E-39 1.8E-43 249.7 30.5 255 5-293 8-282 (342)
70 3vl1_A 26S proteasome regulato 100.0 1.7E-38 5.7E-43 253.5 33.7 253 4-294 135-420 (420)
71 3gre_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44 261.1 26.3 251 5-293 60-359 (437)
72 3mmy_A MRNA export factor; mRN 100.0 1.1E-38 3.8E-43 250.0 30.2 249 3-293 34-304 (368)
73 1p22_A F-BOX/WD-repeat protein 100.0 7E-39 2.4E-43 256.7 29.0 239 4-293 169-414 (435)
74 1r5m_A SIR4-interacting protei 100.0 1.4E-38 4.7E-43 254.2 30.2 241 6-293 43-319 (425)
75 4ggc_A P55CDC, cell division c 100.0 7.7E-38 2.6E-42 240.6 32.9 246 5-293 64-315 (318)
76 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-38 6.1E-43 283.8 33.5 253 4-292 611-912 (1249)
77 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-38 8.4E-43 242.8 29.7 236 3-293 13-255 (313)
78 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-38 6.3E-43 251.8 29.5 240 12-293 38-299 (402)
79 1p22_A F-BOX/WD-repeat protein 100.0 8.7E-38 3E-42 250.3 33.0 234 6-292 131-364 (435)
80 3odt_A Protein DOA1; ubiquitin 100.0 3.7E-37 1.3E-41 236.2 34.1 237 4-293 55-296 (313)
81 3frx_A Guanine nucleotide-bind 100.0 5.7E-38 2E-42 241.2 27.9 209 44-293 8-227 (319)
82 4aez_A CDC20, WD repeat-contai 100.0 1.8E-37 6.2E-42 245.9 30.0 241 6-293 89-336 (401)
83 3v7d_B Cell division control p 100.0 2.8E-37 9.6E-42 249.5 31.6 241 4-293 158-421 (464)
84 2pm7_B Protein transport prote 100.0 1.8E-37 6.3E-42 236.0 28.6 215 47-293 3-238 (297)
85 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.2E-37 2.1E-41 246.2 33.1 265 3-294 154-443 (445)
86 4gq1_A NUP37; propeller, trans 100.0 9.2E-39 3.2E-43 252.3 20.7 261 20-291 99-387 (393)
87 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-36 6.2E-41 243.4 33.9 256 7-293 118-391 (445)
88 3iz6_a 40S ribosomal protein R 100.0 1.1E-37 3.9E-42 245.2 25.1 227 33-293 46-280 (380)
89 3gre_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 249.0 26.4 244 6-290 109-437 (437)
90 4e54_B DNA damage-binding prot 100.0 1.4E-37 4.9E-42 249.0 24.2 214 46-293 112-327 (435)
91 1pgu_A Actin interacting prote 100.0 1.4E-36 4.9E-41 253.4 30.0 243 6-293 16-283 (615)
92 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-36 6.4E-41 270.9 31.7 270 4-293 653-1034(1249)
93 3dw8_B Serine/threonine-protei 100.0 2E-36 6.7E-41 243.4 27.6 246 9-292 94-445 (447)
94 4aow_A Guanine nucleotide-bind 100.0 4E-36 1.4E-40 233.2 27.7 214 41-293 26-246 (340)
95 2oaj_A Protein SNI1; WD40 repe 100.0 4.3E-36 1.5E-40 258.5 30.6 251 6-291 15-310 (902)
96 3mkq_A Coatomer beta'-subunit; 100.0 3.8E-36 1.3E-40 258.5 30.3 245 4-293 51-302 (814)
97 4gga_A P55CDC, cell division c 100.0 2.9E-35 1E-39 234.6 32.7 238 11-293 108-353 (420)
98 2oaj_A Protein SNI1; WD40 repe 100.0 9.3E-36 3.2E-40 256.4 31.0 277 4-293 147-605 (902)
99 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-35 4.4E-40 231.3 28.3 245 5-293 16-271 (355)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-35 6.3E-40 237.8 29.5 246 8-291 4-337 (450)
101 1pgu_A Actin interacting prote 100.0 1.7E-35 5.8E-40 247.0 30.2 245 4-293 59-328 (615)
102 3lrv_A PRE-mRNA-splicing facto 100.0 4.4E-36 1.5E-40 233.1 24.2 230 19-292 45-291 (343)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.7E-35 1.3E-39 236.0 30.4 243 6-293 100-391 (450)
104 3bg1_A Protein SEC13 homolog; 100.0 4.2E-36 1.4E-40 230.5 23.1 216 4-247 53-293 (316)
105 3jrp_A Fusion protein of prote 100.0 1.9E-35 6.5E-40 232.6 27.2 216 43-293 1-240 (379)
106 4ggc_A P55CDC, cell division c 100.0 7.7E-34 2.6E-38 218.3 33.0 239 11-293 28-273 (318)
107 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-35 1.2E-39 233.4 26.1 243 5-292 12-296 (588)
108 1yfq_A Cell cycle arrest prote 100.0 1.1E-34 3.7E-39 225.3 27.0 237 5-285 53-315 (342)
109 3mmy_A MRNA export factor; mRN 100.0 5.5E-35 1.9E-39 229.0 24.9 245 4-291 82-344 (368)
110 3ei3_B DNA damage-binding prot 100.0 2.4E-34 8.1E-39 226.8 25.9 215 42-293 62-282 (383)
111 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-34 8.5E-39 228.6 24.6 234 6-282 83-350 (588)
112 2w18_A PALB2, fancn, partner a 100.0 2.7E-33 9.1E-38 209.8 28.7 238 10-292 41-356 (356)
113 4h5i_A Guanine nucleotide-exch 100.0 9.2E-34 3.2E-38 221.5 26.0 205 6-248 131-344 (365)
114 2xyi_A Probable histone-bindin 100.0 2.4E-33 8.1E-38 224.2 27.6 217 48-293 123-353 (430)
115 4a11_B DNA excision repair pro 100.0 4.6E-33 1.6E-37 221.1 28.8 264 6-292 97-404 (408)
116 3f3f_A Nucleoporin SEH1; struc 100.0 4.5E-33 1.5E-37 216.5 27.0 225 47-293 5-249 (351)
117 3zwl_B Eukaryotic translation 100.0 6.9E-33 2.4E-37 217.2 27.7 214 46-293 25-249 (369)
118 3lrv_A PRE-mRNA-splicing facto 100.0 3.3E-33 1.1E-37 217.0 23.3 222 26-290 88-330 (343)
119 3jro_A Fusion protein of prote 100.0 3.9E-33 1.3E-37 237.0 25.7 215 46-293 2-238 (753)
120 2w18_A PALB2, fancn, partner a 100.0 8.2E-33 2.8E-37 207.1 22.7 205 8-245 111-355 (356)
121 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-31 5.2E-36 208.3 28.9 249 10-293 60-336 (355)
122 1l0q_A Surface layer protein; 100.0 5.7E-31 1.9E-35 208.1 32.6 235 9-293 32-275 (391)
123 3bws_A Protein LP49; two-domai 100.0 2.4E-31 8.1E-36 213.0 29.7 239 5-293 166-432 (433)
124 3bws_A Protein LP49; two-domai 100.0 4.8E-31 1.6E-35 211.2 26.7 237 9-293 123-390 (433)
125 4gq1_A NUP37; propeller, trans 100.0 1.3E-31 4.5E-36 211.5 20.7 227 3-246 131-388 (393)
126 1l0q_A Surface layer protein; 100.0 1.8E-29 6.2E-34 199.5 30.1 222 25-293 4-233 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.6E-26 8.8E-31 182.3 29.8 222 22-293 143-387 (415)
128 1ri6_A Putative isomerase YBHE 100.0 2.7E-25 9.1E-30 172.4 28.7 247 6-292 35-307 (343)
129 2oit_A Nucleoporin 214KDA; NH2 100.0 3.5E-26 1.2E-30 182.2 23.6 244 7-290 35-330 (434)
130 2ojh_A Uncharacterized protein 100.0 3.1E-26 1.1E-30 173.9 21.7 235 5-284 38-293 (297)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.8E-25 1.6E-29 175.0 27.8 220 4-275 174-410 (415)
132 3u4y_A Uncharacterized protein 99.9 9.6E-25 3.3E-29 168.6 28.5 250 7-293 39-304 (331)
133 1nir_A Nitrite reductase; hemo 99.9 7.8E-25 2.7E-29 178.9 28.5 245 18-293 145-402 (543)
134 1nir_A Nitrite reductase; hemo 99.9 2E-24 6.8E-29 176.5 28.5 251 8-293 221-514 (543)
135 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-25 1.6E-29 187.9 24.4 250 8-292 36-366 (741)
136 3vgz_A Uncharacterized protein 99.9 1.9E-23 6.7E-28 162.6 30.4 241 8-293 40-303 (353)
137 3hfq_A Uncharacterized protein 99.9 1.2E-23 4.1E-28 163.5 28.4 251 8-292 39-316 (347)
138 1pby_B Quinohemoprotein amine 99.9 4.7E-24 1.6E-28 165.0 25.6 233 10-293 35-310 (337)
139 3u4y_A Uncharacterized protein 99.9 1.4E-23 4.7E-28 162.1 28.1 235 20-293 7-252 (331)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 3.2E-24 1.1E-28 170.9 25.0 166 7-196 91-280 (434)
141 2ojh_A Uncharacterized protein 99.9 2.8E-24 9.5E-29 163.2 22.7 223 28-293 17-258 (297)
142 1ri6_A Putative isomerase YBHE 99.9 8.1E-23 2.8E-27 158.4 29.1 232 25-292 7-261 (343)
143 1jmx_B Amine dehydrogenase; ox 99.9 2.4E-23 8.3E-28 161.8 25.8 237 19-293 8-325 (349)
144 3o4h_A Acylamino-acid-releasin 99.9 7.4E-24 2.5E-28 175.7 22.8 231 8-291 21-274 (582)
145 3vgz_A Uncharacterized protein 99.9 1.6E-22 5.4E-27 157.5 28.6 227 10-283 90-334 (353)
146 1xfd_A DIP, dipeptidyl aminope 99.9 1.9E-24 6.5E-29 183.7 18.2 237 9-290 17-341 (723)
147 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-22 6.2E-27 171.1 25.9 245 6-293 118-435 (706)
148 1xfd_A DIP, dipeptidyl aminope 99.9 2.5E-22 8.7E-27 170.7 25.4 239 10-292 62-392 (723)
149 2ecf_A Dipeptidyl peptidase IV 99.9 2E-22 6.9E-27 171.7 24.1 237 10-292 110-412 (741)
150 1pby_B Quinohemoprotein amine 99.9 7.9E-22 2.7E-26 152.5 23.9 225 25-293 3-269 (337)
151 1k32_A Tricorn protease; prote 99.9 7.6E-22 2.6E-26 173.7 26.4 243 6-293 334-637 (1045)
152 3scy_A Hypothetical bacterial 99.9 3.2E-21 1.1E-25 150.6 27.2 256 8-292 49-336 (361)
153 2z3z_A Dipeptidyl aminopeptida 99.9 1E-21 3.5E-26 166.5 24.3 239 9-292 82-390 (706)
154 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.9E-21 3.4E-25 148.0 26.0 250 10-293 41-341 (365)
155 1k32_A Tricorn protease; prote 99.9 1.4E-21 4.9E-26 171.9 23.3 229 10-291 246-500 (1045)
156 3hfq_A Uncharacterized protein 99.9 3.4E-20 1.2E-24 144.0 27.5 243 25-292 4-270 (347)
157 1q7f_A NHL, brain tumor CG1071 99.9 3E-19 1E-23 134.9 31.1 239 7-293 28-280 (286)
158 3fvz_A Peptidyl-glycine alpha- 99.9 4.5E-19 1.5E-23 136.6 28.0 256 7-292 22-321 (329)
159 1z68_A Fibroblast activation p 99.9 7.8E-22 2.7E-26 167.6 13.6 252 13-292 20-345 (719)
160 4a5s_A Dipeptidyl peptidase 4 99.9 2.3E-20 7.8E-25 158.8 19.3 250 8-292 16-352 (740)
161 3scy_A Hypothetical bacterial 99.8 1.3E-17 4.5E-22 130.2 30.9 253 25-292 15-290 (361)
162 3pe7_A Oligogalacturonate lyas 99.8 3.7E-19 1.3E-23 140.3 20.1 237 14-293 41-329 (388)
163 1z68_A Fibroblast activation p 99.8 2.3E-19 7.8E-24 152.5 18.4 244 11-292 62-390 (719)
164 3o4h_A Acylamino-acid-releasin 99.8 6.3E-19 2.1E-23 146.2 20.5 225 9-292 65-314 (582)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-17 4.7E-22 130.2 25.4 235 25-292 4-290 (365)
166 1rwi_B Serine/threonine-protei 99.8 6.9E-17 2.4E-21 120.9 27.0 237 10-293 25-264 (270)
167 2oiz_A Aromatic amine dehydrog 99.8 4.3E-17 1.5E-21 126.9 25.9 240 13-293 54-334 (361)
168 1jmx_B Amine dehydrogenase; ox 99.8 9E-18 3.1E-22 130.4 21.4 217 10-251 44-329 (349)
169 3pe7_A Oligogalacturonate lyas 99.8 2E-17 6.8E-22 130.4 22.4 240 7-292 79-381 (388)
170 3azo_A Aminopeptidase; POP fam 99.8 1.9E-17 6.4E-22 139.5 23.5 253 5-291 20-321 (662)
171 3e5z_A Putative gluconolactona 99.8 1.3E-16 4.4E-21 121.1 25.1 239 6-292 25-285 (296)
172 3no2_A Uncharacterized protein 99.8 6.3E-16 2.1E-20 115.6 27.6 220 22-280 5-230 (276)
173 2bkl_A Prolyl endopeptidase; m 99.8 5.5E-17 1.9E-21 137.2 24.3 243 6-293 118-397 (695)
174 3azo_A Aminopeptidase; POP fam 99.8 3.9E-17 1.3E-21 137.5 23.2 244 13-291 81-367 (662)
175 2xdw_A Prolyl endopeptidase; a 99.8 3.5E-16 1.2E-20 132.6 29.0 251 7-293 123-414 (710)
176 2dg1_A DRP35, lactonase; beta 99.8 1.5E-15 5.2E-20 117.1 29.3 243 6-283 42-300 (333)
177 3dsm_A Uncharacterized protein 99.8 1.3E-15 4.6E-20 117.0 28.6 235 11-292 46-301 (328)
178 3c5m_A Oligogalacturonate lyas 99.8 1.3E-17 4.5E-22 131.7 16.8 232 11-293 38-329 (396)
179 2dg1_A DRP35, lactonase; beta 99.8 1.4E-16 4.7E-21 123.0 21.6 240 9-292 6-262 (333)
180 2gop_A Trilobed protease; beta 99.8 9E-16 3.1E-20 119.1 25.3 221 10-291 60-329 (347)
181 2z2n_A Virginiamycin B lyase; 99.7 5.6E-14 1.9E-18 106.5 31.7 239 6-291 12-253 (299)
182 3c5m_A Oligogalacturonate lyas 99.7 2.3E-16 7.8E-21 124.6 18.8 232 14-291 86-380 (396)
183 3dsm_A Uncharacterized protein 99.7 8.5E-15 2.9E-19 112.6 26.1 216 31-293 15-253 (328)
184 1qks_A Cytochrome CD1 nitrite 99.7 2.3E-14 8E-19 117.2 30.0 247 16-293 161-421 (567)
185 1yr2_A Prolyl oligopeptidase; 99.7 5.9E-15 2E-19 125.7 25.6 243 9-293 163-441 (741)
186 1q7f_A NHL, brain tumor CG1071 99.7 5.2E-14 1.8E-18 106.2 27.1 201 51-292 27-237 (286)
187 2gop_A Trilobed protease; beta 99.7 1.2E-14 4E-19 112.8 23.7 217 9-292 15-290 (347)
188 3fvz_A Peptidyl-glycine alpha- 99.7 1.6E-14 5.4E-19 111.2 24.0 211 53-293 23-277 (329)
189 4a5s_A Dipeptidyl peptidase 4 99.7 2.3E-16 7.7E-21 134.4 15.0 206 54-293 17-294 (740)
190 2z2n_A Virginiamycin B lyase; 99.7 7.3E-13 2.5E-17 100.4 32.1 236 8-293 56-295 (299)
191 2oiz_A Aromatic amine dehydrog 99.7 9.5E-15 3.2E-19 113.7 21.2 237 20-293 13-295 (361)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.8E-13 6.3E-18 104.5 27.5 242 10-293 19-299 (314)
193 2xdw_A Prolyl endopeptidase; a 99.7 3.3E-14 1.1E-18 120.6 24.3 236 20-291 81-366 (710)
194 2bkl_A Prolyl endopeptidase; m 99.7 2.5E-14 8.4E-19 121.1 22.9 234 19-292 76-348 (695)
195 3hrp_A Uncharacterized protein 99.7 6.3E-13 2.1E-17 105.1 29.4 248 9-292 131-409 (409)
196 2qc5_A Streptogramin B lactona 99.7 3.7E-12 1.3E-16 96.5 32.4 238 8-292 19-259 (300)
197 1qks_A Cytochrome CD1 nitrite 99.7 8.1E-13 2.8E-17 108.2 29.9 245 10-293 198-477 (567)
198 1xip_A Nucleoporin NUP159; bet 99.7 9.5E-15 3.3E-19 113.0 17.1 174 55-279 39-230 (388)
199 3e5z_A Putative gluconolactona 99.6 3.7E-13 1.3E-17 102.0 25.2 204 45-292 19-245 (296)
200 2mad_H Methylamine dehydrogena 99.6 2.4E-12 8.2E-17 100.4 29.8 236 13-293 70-350 (373)
201 2qc5_A Streptogramin B lactona 99.6 1.2E-11 4.1E-16 93.7 30.7 235 9-292 62-299 (300)
202 3g4e_A Regucalcin; six bladed 99.6 6.9E-12 2.3E-16 95.0 28.6 233 8-281 12-260 (297)
203 3sjl_D Methylamine dehydrogena 99.6 1.2E-12 4E-17 101.0 23.2 238 14-293 83-363 (386)
204 1rwi_B Serine/threonine-protei 99.6 5.5E-13 1.9E-17 99.6 20.8 197 9-249 67-266 (270)
205 3no2_A Uncharacterized protein 99.6 2.4E-12 8.3E-17 96.2 22.3 179 66-292 5-194 (276)
206 1xip_A Nucleoporin NUP159; bet 99.6 2.3E-13 7.8E-18 105.4 17.1 174 9-233 38-230 (388)
207 3dr2_A Exported gluconolactona 99.5 1.1E-11 3.8E-16 94.3 23.7 229 8-284 44-298 (305)
208 3c75_H MADH, methylamine dehyd 99.5 7.7E-12 2.6E-16 98.2 22.9 258 19-293 81-402 (426)
209 3iuj_A Prolyl endopeptidase; h 99.5 5.5E-12 1.9E-16 106.6 22.9 243 7-293 127-405 (693)
210 2ghs_A AGR_C_1268P; regucalcin 99.5 2.3E-10 7.8E-15 87.8 29.4 226 11-281 51-290 (326)
211 1yr2_A Prolyl oligopeptidase; 99.5 4.5E-12 1.5E-16 108.1 21.7 234 19-292 115-392 (741)
212 3sjl_D Methylamine dehydrogena 99.5 1.6E-11 5.4E-16 94.8 22.1 240 17-293 39-320 (386)
213 2mad_H Methylamine dehydrogena 99.5 2.4E-10 8.2E-15 89.1 28.8 237 18-293 28-307 (373)
214 2qe8_A Uncharacterized protein 99.5 1.1E-11 3.7E-16 95.9 20.6 230 9-291 17-276 (343)
215 2ece_A 462AA long hypothetical 99.5 2.6E-10 8.9E-15 88.9 25.9 228 20-281 93-399 (462)
216 1mda_H Methylamine dehydrogena 99.5 7.6E-11 2.6E-15 91.1 22.6 240 25-293 34-346 (368)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.3E-10 4.4E-15 88.7 23.6 201 8-248 70-300 (314)
218 3hrp_A Uncharacterized protein 99.4 7E-10 2.4E-14 87.7 26.5 203 54-292 131-353 (409)
219 2hz6_A Endoplasmic reticulum t 99.4 3.2E-13 1.1E-17 105.4 7.4 205 21-275 8-216 (369)
220 3g4e_A Regucalcin; six bladed 99.4 4.8E-10 1.6E-14 84.9 24.0 182 8-227 53-254 (297)
221 2hz6_A Endoplasmic reticulum t 99.4 8.5E-13 2.9E-17 103.0 6.9 179 65-293 8-192 (369)
222 2iwa_A Glutamine cyclotransfer 99.3 2.3E-09 7.8E-14 78.5 23.3 208 44-292 10-236 (266)
223 2qe8_A Uncharacterized protein 99.3 1.7E-10 5.8E-15 89.2 16.4 228 7-285 65-313 (343)
224 3hxj_A Pyrrolo-quinoline quino 99.3 2.8E-09 9.7E-14 81.8 23.0 214 25-292 109-323 (330)
225 1kb0_A Quinohemoprotein alcoho 99.3 9.6E-10 3.3E-14 92.4 21.5 245 25-293 130-507 (677)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.3 8.9E-09 3E-13 80.6 25.7 225 25-293 55-296 (376)
227 3iuj_A Prolyl endopeptidase; h 99.3 7.8E-10 2.7E-14 93.6 20.6 202 51-292 126-358 (693)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.7E-08 5.6E-13 79.1 26.8 227 25-293 105-337 (376)
229 3dr2_A Exported gluconolactona 99.3 4E-09 1.4E-13 80.1 22.5 204 45-292 36-266 (305)
230 1yiq_A Quinohemoprotein alcoho 99.3 2.2E-09 7.5E-14 90.5 22.6 247 25-293 123-505 (689)
231 3nol_A Glutamine cyclotransfer 99.3 1.6E-08 5.3E-13 73.3 23.8 194 45-283 33-245 (262)
232 2iwa_A Glutamine cyclotransfer 99.3 4.6E-09 1.6E-13 77.0 21.1 200 11-249 23-239 (266)
233 2ghs_A AGR_C_1268P; regucalcin 99.2 1.9E-08 6.4E-13 77.2 24.5 181 8-227 89-284 (326)
234 1npe_A Nidogen, entactin; glyc 99.2 1.7E-07 5.9E-12 69.6 28.7 226 25-293 3-238 (267)
235 1npe_A Nidogen, entactin; glyc 99.2 2.8E-07 9.6E-12 68.5 28.7 222 10-275 37-263 (267)
236 3nok_A Glutaminyl cyclase; bet 99.2 8.8E-08 3E-12 69.4 22.9 193 45-281 45-253 (268)
237 3mbr_X Glutamine cyclotransfer 99.1 1.9E-07 6.6E-12 67.1 24.1 193 45-282 11-223 (243)
238 3nol_A Glutamine cyclotransfer 99.1 6.6E-08 2.3E-12 70.1 21.7 181 12-235 46-244 (262)
239 3c75_H MADH, methylamine dehyd 99.1 1.3E-08 4.5E-13 80.1 19.6 217 13-251 122-406 (426)
240 3nok_A Glutaminyl cyclase; bet 99.1 6.2E-08 2.1E-12 70.2 21.1 178 12-235 58-254 (268)
241 1kb0_A Quinohemoprotein alcoho 99.1 8.6E-08 2.9E-12 80.7 24.4 236 25-278 176-535 (677)
242 1yiq_A Quinohemoprotein alcoho 99.1 1.3E-07 4.4E-12 79.8 25.1 231 32-280 182-536 (689)
243 1mda_H Methylamine dehydrogena 99.1 1.4E-08 4.6E-13 78.6 16.5 213 13-250 69-349 (368)
244 1fwx_A Nitrous oxide reductase 99.1 1.7E-08 5.9E-13 81.6 17.5 216 20-292 99-360 (595)
245 2ece_A 462AA long hypothetical 99.1 1.7E-07 5.8E-12 73.3 22.4 194 63-292 93-351 (462)
246 3mbr_X Glutamine cyclotransfer 99.1 5E-07 1.7E-11 64.9 23.2 190 11-235 23-223 (243)
247 2p4o_A Hypothetical protein; p 99.0 2.2E-06 7.4E-11 65.0 28.0 238 10-282 33-277 (306)
248 1kv9_A Type II quinohemoprotei 99.0 7.4E-08 2.5E-12 81.0 20.5 237 25-293 119-488 (668)
249 3hxj_A Pyrrolo-quinoline quino 99.0 8E-08 2.7E-12 73.7 18.5 180 20-249 146-326 (330)
250 2fp8_A Strictosidine synthase; 99.0 1.1E-06 3.9E-11 67.1 23.4 240 11-292 21-312 (322)
251 3v65_B Low-density lipoprotein 98.9 8.5E-06 2.9E-10 63.9 28.2 223 25-290 89-315 (386)
252 4a2l_A BT_4663, two-component 98.9 2E-05 6.7E-10 68.1 32.0 248 8-292 214-479 (795)
253 1k3i_A Galactose oxidase precu 98.9 2.2E-06 7.7E-11 72.1 25.4 108 20-132 195-324 (656)
254 2ad6_A Methanol dehydrogenase 98.9 1.6E-06 5.5E-11 71.5 23.0 67 25-94 117-194 (571)
255 3qqz_A Putative uncharacterize 98.9 6.9E-06 2.4E-10 59.9 25.0 220 48-291 21-251 (255)
256 4a2l_A BT_4663, two-component 98.9 1.1E-05 3.8E-10 69.6 28.6 248 11-293 175-436 (795)
257 1ijq_A LDL receptor, low-densi 98.8 1.3E-05 4.4E-10 61.1 30.5 226 25-291 3-236 (316)
258 3v64_C Agrin; beta propeller, 98.8 2.5E-05 8.5E-10 60.4 29.0 223 25-290 46-272 (349)
259 2xe4_A Oligopeptidase B; hydro 98.8 9.6E-06 3.3E-10 69.4 25.0 110 14-131 177-304 (751)
260 1w6s_A Methanol dehydrogenase 98.8 3.8E-06 1.3E-10 69.4 21.4 66 26-94 124-200 (599)
261 3v9f_A Two-component system se 98.7 4.6E-05 1.6E-09 65.6 27.8 242 8-292 312-567 (781)
262 3v65_B Low-density lipoprotein 98.7 4.5E-05 1.5E-09 59.8 28.4 200 10-249 117-320 (386)
263 3tc9_A Hypothetical hydrolase; 98.7 5.9E-05 2E-09 60.0 25.5 248 10-292 138-429 (430)
264 3qqz_A Putative uncharacterize 98.7 3.5E-05 1.2E-09 56.2 26.0 208 7-245 25-251 (255)
265 1k3i_A Galactose oxidase precu 98.6 2.8E-06 9.5E-11 71.6 17.5 226 20-282 252-530 (656)
266 2p4o_A Hypothetical protein; p 98.6 6.6E-05 2.2E-09 56.9 23.8 203 54-292 32-241 (306)
267 3v64_C Agrin; beta propeller, 98.6 7.9E-05 2.7E-09 57.5 29.0 199 11-249 75-277 (349)
268 1kv9_A Type II quinohemoprotei 98.6 4.1E-05 1.4E-09 64.5 24.1 108 25-135 164-337 (668)
269 3p5b_L Low density lipoprotein 98.6 0.0001 3.5E-09 58.1 30.6 226 25-291 85-318 (400)
270 2ad6_A Methanol dehydrogenase 98.6 0.00012 4.2E-09 60.4 25.9 82 183-279 442-523 (571)
271 1flg_A Protein (quinoprotein e 98.6 2.9E-05 1E-09 64.2 21.8 69 25-93 119-201 (582)
272 1fwx_A Nitrous oxide reductase 98.6 2E-06 6.9E-11 69.8 14.4 222 10-253 135-437 (595)
273 3v9f_A Two-component system se 98.6 0.00026 8.8E-09 61.0 31.8 241 9-292 258-523 (781)
274 2fp8_A Strictosidine synthase; 98.5 0.00014 4.7E-09 55.5 22.7 191 55-282 20-248 (322)
275 1ijq_A LDL receptor, low-densi 98.5 0.00016 5.3E-09 55.1 28.1 202 10-249 31-240 (316)
276 1n7d_A LDL receptor, low-densi 98.5 6.2E-06 2.1E-10 69.7 16.1 220 32-291 385-612 (699)
277 2vpj_A Kelch-like protein 12; 98.5 0.00017 6E-09 54.3 22.3 229 21-293 14-278 (301)
278 3sov_A LRP-6, low-density lipo 98.5 0.00019 6.4E-09 54.6 27.2 225 25-291 6-236 (318)
279 1flg_A Protein (quinoprotein e 98.4 0.00034 1.2E-08 57.9 24.5 81 184-279 465-546 (582)
280 4hw6_A Hypothetical protein, I 98.4 0.00036 1.2E-08 55.5 25.6 247 10-292 140-432 (433)
281 3m0c_C LDL receptor, low-densi 98.4 0.00075 2.6E-08 57.8 30.0 225 25-290 397-629 (791)
282 3ii7_A Kelch-like protein 7; p 98.4 0.00038 1.3E-08 52.6 22.1 226 25-293 14-272 (306)
283 1n7d_A LDL receptor, low-densi 98.3 1.6E-05 5.4E-10 67.3 14.7 202 10-249 407-616 (699)
284 3m0c_C LDL receptor, low-densi 98.3 0.0012 4.1E-08 56.6 27.8 203 9-249 424-634 (791)
285 2xn4_A Kelch-like protein 2; s 98.3 0.0005 1.7E-08 51.9 22.0 226 25-293 18-276 (302)
286 3p5b_L Low density lipoprotein 98.2 0.001 3.4E-08 52.4 30.3 203 9-249 112-322 (400)
287 1zgk_A Kelch-like ECH-associat 98.2 0.00091 3.1E-08 50.6 20.4 229 21-293 24-287 (308)
288 1w6s_A Methanol dehydrogenase 98.2 0.0013 4.4E-08 54.6 22.0 204 67-293 63-342 (599)
289 3sov_A LRP-6, low-density lipo 98.2 0.0011 3.9E-08 50.3 26.5 200 10-249 36-240 (318)
290 3kya_A Putative phosphatase; s 98.1 0.002 6.8E-08 51.8 25.5 262 10-293 140-475 (496)
291 4hw6_A Hypothetical protein, I 98.1 0.002 7E-08 51.2 23.4 200 55-291 140-372 (433)
292 3amr_A 3-phytase; beta-propell 98.1 0.0015 5.2E-08 49.7 23.4 200 66-292 40-262 (355)
293 2xe4_A Oligopeptidase B; hydro 98.0 0.00034 1.1E-08 60.0 16.6 195 55-289 175-394 (751)
294 3s94_A LRP-6, low-density lipo 98.0 0.0059 2E-07 51.0 25.6 221 32-292 17-242 (619)
295 3tc9_A Hypothetical hydrolase; 97.9 0.0045 1.5E-07 49.3 23.4 114 10-131 180-301 (430)
296 3ei3_A DNA damage-binding prot 97.9 0.0097 3.3E-07 53.4 24.3 220 33-289 807-1058(1158)
297 2vpj_A Kelch-like protein 12; 97.9 0.0033 1.1E-07 47.3 19.7 193 21-253 62-284 (301)
298 3amr_A 3-phytase; beta-propell 97.9 0.0038 1.3E-07 47.5 24.0 199 25-249 42-266 (355)
299 2p9w_A MAL S 1 allergenic prot 97.9 0.0038 1.3E-07 47.1 18.1 176 98-292 11-214 (334)
300 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0078 2.7E-07 50.4 30.3 223 25-291 8-235 (628)
301 3ii7_A Kelch-like protein 7; p 97.9 0.0043 1.5E-07 46.8 20.0 196 21-256 55-281 (306)
302 2xbg_A YCF48-like protein; pho 97.8 0.0052 1.8E-07 46.9 26.8 232 8-290 79-319 (327)
303 4asc_A Kelch repeat and BTB do 97.8 0.0052 1.8E-07 46.6 22.2 226 25-293 7-277 (315)
304 2p9w_A MAL S 1 allergenic prot 97.8 0.0066 2.2E-07 45.8 21.7 173 55-247 14-215 (334)
305 3s94_A LRP-6, low-density lipo 97.7 0.015 5E-07 48.7 23.6 200 10-249 41-245 (619)
306 2xzh_A Clathrin heavy chain 1; 97.7 0.0078 2.7E-07 45.2 25.2 218 33-293 49-290 (365)
307 2xzh_A Clathrin heavy chain 1; 97.7 0.0083 2.8E-07 45.1 28.3 234 19-290 75-329 (365)
308 4a0p_A LRP6, LRP-6, low-densit 97.7 0.016 5.6E-07 48.5 27.8 198 10-249 38-239 (628)
309 2xn4_A Kelch-like protein 2; s 97.7 0.0091 3.1E-07 44.9 19.6 190 21-250 61-279 (302)
310 1zgk_A Kelch-like ECH-associat 97.6 0.013 4.4E-07 44.3 17.2 193 21-253 70-293 (308)
311 2woz_A Kelch repeat and BTB do 97.6 0.014 4.8E-07 44.3 20.6 225 25-293 18-287 (318)
312 1bpo_A Protein (clathrin); cla 97.5 0.022 7.4E-07 44.7 25.6 218 33-293 48-289 (494)
313 2uvk_A YJHT; unknown function, 97.5 0.023 7.9E-07 43.8 21.0 94 21-121 19-128 (357)
314 2xbg_A YCF48-like protein; pho 97.5 0.022 7.4E-07 43.5 28.2 231 8-287 35-273 (327)
315 3a9g_A Putative uncharacterize 97.4 0.025 8.5E-07 43.7 27.9 102 10-119 30-153 (354)
316 1bpo_A Protein (clathrin); cla 97.4 0.033 1.1E-06 43.8 28.7 233 19-289 74-327 (494)
317 3kya_A Putative phosphatase; s 97.3 0.047 1.6E-06 44.0 23.3 115 10-131 187-341 (496)
318 4asc_A Kelch repeat and BTB do 97.3 0.037 1.3E-06 41.9 18.2 104 20-131 44-174 (315)
319 3pbp_A Nucleoporin NUP82; beta 97.1 0.062 2.1E-06 42.1 19.2 167 65-243 31-208 (452)
320 2ism_A Putative oxidoreductase 97.1 0.059 2E-06 41.6 27.4 102 11-119 33-153 (352)
321 1xi4_A Clathrin heavy chain; a 97.0 0.074 2.5E-06 48.4 17.5 219 33-293 48-289 (1630)
322 1xi4_A Clathrin heavy chain; a 97.0 0.1 3.6E-06 47.5 18.2 203 19-257 74-299 (1630)
323 2uvk_A YJHT; unknown function, 96.9 0.091 3.1E-06 40.5 18.1 60 186-256 286-351 (357)
324 3ei3_A DNA damage-binding prot 96.9 0.25 8.7E-06 44.6 30.3 104 25-131 525-636 (1158)
325 3sre_A PON1, serum paraoxonase 96.7 0.13 4.5E-06 39.5 22.1 193 55-283 51-287 (355)
326 3sre_A PON1, serum paraoxonase 96.7 0.14 4.9E-06 39.4 20.8 88 31-119 81-183 (355)
327 2woz_A Kelch repeat and BTB do 96.7 0.13 4.4E-06 38.9 18.7 105 20-132 55-185 (318)
328 2be1_A Serine/threonine-protei 96.5 0.2 6.7E-06 38.3 21.0 111 25-136 12-135 (339)
329 2be1_A Serine/threonine-protei 96.4 0.032 1.1E-06 42.6 9.9 118 66-197 10-133 (339)
330 3pbp_A Nucleoporin NUP82; beta 96.3 0.27 9.3E-06 38.6 19.8 118 168-288 68-207 (452)
331 1tl2_A L10, protein (tachylect 96.2 0.19 6.6E-06 35.6 13.7 189 65-286 3-203 (236)
332 2g8s_A Glucose/sorbosone dehyd 96.2 0.3 1E-05 37.7 29.3 75 215-292 271-351 (353)
333 2zwa_A Leucine carboxyl methyl 96.0 0.62 2.1E-05 39.7 20.1 197 65-293 397-635 (695)
334 3ott_A Two-component system se 96.0 0.67 2.3E-05 39.9 27.5 244 10-291 192-446 (758)
335 2zwa_A Leucine carboxyl methyl 95.9 0.72 2.5E-05 39.3 21.6 106 21-131 397-522 (695)
336 1tl2_A L10, protein (tachylect 95.7 0.065 2.2E-06 37.9 7.7 102 10-125 42-157 (236)
337 3ott_A Two-component system se 95.5 1.1 3.6E-05 38.7 27.6 230 9-284 63-299 (758)
338 3das_A Putative oxidoreductase 94.9 0.96 3.3E-05 34.7 27.5 104 10-119 33-158 (347)
339 1cru_A Protein (soluble quinop 93.3 2.6 9E-05 33.7 29.3 107 10-120 28-163 (454)
340 3qhy_B Beta-lactamase inhibito 93.2 1.9 6.6E-05 31.9 22.6 221 9-291 24-244 (282)
341 2ism_A Putative oxidoreductase 92.4 3 0.0001 32.1 21.7 74 54-131 31-114 (352)
342 3a9g_A Putative uncharacterize 91.9 3.5 0.00012 31.7 22.5 75 54-131 29-114 (354)
343 3sbq_A Nitrous-oxide reductase 90.9 6 0.00021 32.6 18.8 72 217-292 325-407 (638)
344 4gq2_M Nucleoporin NUP120; bet 89.2 3.5 0.00012 36.7 10.3 76 55-131 237-317 (950)
345 1q47_A Semaphorin 3A; beta pro 89.0 2.5 8.6E-05 34.2 8.6 73 216-288 405-487 (495)
346 3al9_A Plexin-A2; beta-propell 87.5 2.6 9E-05 34.5 8.0 73 216-288 401-476 (539)
347 3das_A Putative oxidoreductase 86.4 9.6 0.00033 29.2 12.6 83 207-291 24-114 (347)
348 4gq2_M Nucleoporin NUP120; bet 84.6 22 0.00074 31.8 13.1 39 101-140 237-275 (950)
349 4gz8_A Semaphorin-3A; multi-do 83.9 10 0.00036 32.0 9.9 72 217-288 414-495 (667)
350 3sbq_A Nitrous-oxide reductase 83.4 4.5 0.00015 33.4 7.2 72 54-131 323-408 (638)
351 3ol2_B Plexin-B1; beta-propell 83.2 7.6 0.00026 31.8 8.6 72 216-288 388-461 (528)
352 3nvq_A Semaphorin-7A; beta-pro 80.0 12 0.0004 31.1 8.7 61 228-288 380-444 (590)
353 1olz_A Semaphorin 4D; developm 78.2 10 0.00035 32.1 8.1 73 216-288 398-477 (663)
354 2wg3_C Hedgehog-interacting pr 77.0 27 0.00093 28.1 13.4 113 168-284 16-160 (463)
355 3f7f_A Nucleoporin NUP120; nuc 76.6 5.9 0.0002 33.7 6.1 37 55-94 223-259 (729)
356 4fhn_B Nucleoporin NUP120; pro 76.1 2.7 9.3E-05 38.2 4.4 38 55-93 239-276 (1139)
357 3zwu_A Alkaline phosphatase PH 74.2 16 0.00056 30.4 8.1 60 216-280 477-548 (592)
358 3oky_A Plexin-A2; transmembran 73.9 12 0.0004 31.9 7.2 73 216-288 400-475 (681)
359 1sqj_A OXG-RCBH, oligoxylogluc 72.8 47 0.0016 28.9 12.1 112 8-122 14-143 (789)
360 3uc1_A DNA gyrase subunit A; D 72.5 29 0.001 26.3 24.6 244 25-291 5-277 (327)
361 3no0_A DNA gyrase subunit A; D 70.4 30 0.001 25.5 20.4 211 9-247 24-246 (276)
362 4fhn_B Nucleoporin NUP120; pro 70.1 22 0.00076 32.5 8.7 39 101-140 239-277 (1139)
363 4a9v_A PHOX; hydrolase, beta-p 69.3 32 0.0011 28.6 8.6 61 215-280 476-548 (592)
364 3oky_B Putative uncharacterize 69.2 48 0.0016 27.5 9.8 72 217-288 405-495 (565)
365 3f7f_A Nucleoporin NUP120; nuc 68.6 9.8 0.00033 32.4 5.7 36 10-50 223-258 (729)
366 2wg3_C Hedgehog-interacting pr 67.6 47 0.0016 26.7 27.6 106 12-122 17-160 (463)
367 1cru_A Protein (soluble quinop 67.2 47 0.0016 26.6 22.3 64 54-118 27-98 (454)
368 3b7f_A Glycosyl hydrolase, BNR 65.5 45 0.0015 25.8 25.7 70 55-125 116-202 (394)
369 3zwu_A Alkaline phosphatase PH 65.3 41 0.0014 28.1 8.6 58 57-118 479-548 (592)
370 3b7f_A Glycosyl hydrolase, BNR 57.6 64 0.0022 24.9 25.5 101 25-127 24-143 (394)
371 3s25_A Hypothetical 7-bladed b 56.6 59 0.002 24.2 23.0 87 170-280 151-240 (302)
372 2g8s_A Glucose/sorbosone dehyd 56.6 64 0.0022 24.6 20.1 47 175-227 289-335 (353)
373 1zi0_A DNA gyrase subunit A; b 55.0 64 0.0022 24.1 26.2 247 21-291 2-275 (307)
374 4a9v_A PHOX; hydrolase, beta-p 53.5 98 0.0034 25.8 9.4 60 55-118 477-548 (592)
375 4gz8_A Semaphorin-3A; multi-do 51.3 84 0.0029 26.8 8.3 58 67-126 430-495 (667)
376 1olz_A Semaphorin 4D; developm 50.5 95 0.0032 26.4 8.5 58 67-126 416-477 (663)
377 1suu_A DNA gyrase subunit A; t 49.0 82 0.0028 23.6 21.7 209 60-293 3-231 (312)
378 3qhy_B Beta-lactamase inhibito 48.5 78 0.0027 23.3 20.8 206 10-278 64-269 (282)
379 3al9_A Plexin-A2; beta-propell 46.8 60 0.0021 26.7 6.7 69 10-80 401-476 (539)
380 3mvd_K Regulator of chromosome 44.9 1.1E+02 0.0038 24.0 33.3 250 25-291 86-372 (423)
381 3uc1_A DNA gyrase subunit A; D 43.3 1.1E+02 0.0036 23.3 25.2 238 25-284 55-321 (327)
382 3nvn_B Plexin-C1; beta-propell 43.2 1.3E+02 0.0044 24.3 8.0 71 216-289 341-417 (476)
383 1q47_A Semaphorin 3A; beta pro 41.0 1.1E+02 0.0038 24.9 7.3 70 10-80 405-487 (495)
384 4fww_A Macrophage-stimulating 40.8 62 0.0021 26.5 6.0 73 215-288 405-479 (527)
385 3l6v_A GYRA, DNA gyrase subuni 40.6 1.3E+02 0.0043 23.4 26.7 110 20-133 5-134 (370)
386 3kci_A Probable E3 ubiquitin-p 37.1 1.4E+02 0.0049 23.0 32.0 244 25-292 64-344 (389)
387 3a0f_A Xyloglucanase; beta-pro 36.3 2.1E+02 0.0073 24.8 13.5 113 7-122 19-155 (763)
388 3l6v_A GYRA, DNA gyrase subuni 36.3 1.5E+02 0.0051 23.0 23.1 161 61-247 3-180 (370)
389 3mvd_K Regulator of chromosome 33.3 1.7E+02 0.0059 22.8 28.7 237 26-291 36-320 (423)
390 3ol2_B Plexin-B1; beta-propell 33.0 2.1E+02 0.0071 23.6 8.1 70 9-80 387-461 (528)
391 3no0_A DNA gyrase subunit A; D 32.5 1.5E+02 0.005 21.8 22.6 208 54-291 24-244 (276)
392 3nvq_A Semaphorin-7A; beta-pro 31.4 2.3E+02 0.008 23.7 8.1 58 67-126 381-444 (590)
393 3v4v_A Integrin alpha-4; cell 26.2 2.9E+02 0.01 23.2 11.0 118 172-290 172-310 (597)
394 3kci_A Probable E3 ubiquitin-p 24.7 2.4E+02 0.0083 21.7 30.6 245 25-291 12-291 (389)
395 1vc3_B L-aspartate-alpha-decar 24.6 1.2E+02 0.004 18.1 3.6 30 76-105 18-47 (96)
396 3enb_A PRE-mRNA-processing-spl 23.2 1.2E+02 0.0042 21.0 4.0 38 8-47 14-51 (222)
397 1ukf_A Avirulence protein AVRP 23.2 1.5E+02 0.005 20.3 4.4 36 7-44 117-152 (188)
398 4d9s_A UVB-resistance protein 22.6 2.7E+02 0.0094 21.6 34.8 255 8-291 15-303 (406)
399 1ukf_A Avirulence protein AVRP 22.5 98 0.0033 21.2 3.4 38 52-89 117-154 (188)
400 3oug_A Aspartate 1-decarboxyla 22.1 1.4E+02 0.0049 18.3 3.8 55 50-105 12-74 (114)
401 1c3k_A Agglutinin; beta prism, 22.0 1.7E+02 0.0058 18.9 11.0 71 7-78 37-117 (147)
402 3plx_B Aspartate 1-decarboxyla 21.7 1.3E+02 0.0045 18.1 3.5 29 76-105 18-46 (102)
403 1uhe_A Aspartate 1-decarboxyla 21.4 1.3E+02 0.0046 17.9 3.5 29 76-105 17-45 (97)
404 4hvt_A Ritya.17583.B, post-pro 21.4 3.9E+02 0.014 23.0 23.9 68 18-86 137-226 (711)
405 1wp5_A Topoisomerase IV; broke 21.1 2.7E+02 0.0093 21.0 25.9 250 20-291 3-275 (323)
406 1a12_A RCC1, regulator of chro 20.9 3E+02 0.01 21.4 30.4 249 25-291 70-363 (413)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-49 Score=303.50 Aligned_cols=249 Identities=15% Similarity=0.219 Sum_probs=219.0
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.++.|.+.|++++|+ |+++ +|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~h~~~V~~~~fs--p~~~-~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFH--PTEP-WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEECSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEE
T ss_pred eecCCCCceEEEEEC--CCCC-EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEE
Confidence 356899999999998 9998 999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.+++.+..+. +|...|.+++|+| ++.+|++|+.|++|++||++.. ......+.
T Consensus 84 ~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~----------------------~~~~~~~~ 137 (304)
T 2ynn_A 84 YNTGEKVVDFE---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENN----------------------WALEQTFE 137 (304)
T ss_dssp TTTCCEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGT----------------------TEEEEEEC
T ss_pred CCCCcEEEEEe---CCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCC----------------------cchhhhhc
Confidence 99999999888 7999999999999 8889999999999999999873 12345677
Q ss_pred cCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCe
Q 022590 163 VHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGK 239 (294)
Q Consensus 163 ~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~ 239 (294)
+|...|.+++|+ +.+|++++.|+.|++||++.... .......+...+..+.|+|.+...+|++|+.|+.
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~ 209 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe
Confidence 899999999997 46899999999999999986542 2222334557789999998665579999999999
Q ss_pred EEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 240 IFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 240 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|++||+++++ ....+. +|...|.+++|+|++++|++|+.||.|++||+++
T Consensus 210 i~iWd~~~~~--~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 210 IKIWDYQTKS--CVATLE--GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEETTTTE--EEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEeCCCCc--cceeeC--CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999875 334444 7889999999999999999999999999999864
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.6e-49 Score=303.40 Aligned_cols=242 Identities=15% Similarity=0.178 Sum_probs=204.7
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee----cccCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF----VGHGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
+++..|++++|+ |++ .|++|+.||+|+|||+.+++....+ .+|.+.|++++|+| ++++|++|+.|++|++|
T Consensus 80 ~~~~~v~~~~~s--~d~--~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 80 QTEAGVADLTWV--GER--GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EESSCEEEEEEE--TTT--EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred ccCCCEEEEEEe--CCC--eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 456789999998 776 5889999999999999998765543 47999999999999 89999999999999999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
|+.+++.+..+. +|...|++++|+|++..+|++++.|++|++||+++.. +...+
T Consensus 155 d~~~~~~~~~~~---~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----------------------~~~~~ 208 (344)
T 4gqb_B 155 DLAQQVVLSSYR---AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-----------------------PASQI 208 (344)
T ss_dssp ETTTTEEEEEEC---CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-----------------------CEEEC
T ss_pred ECCCCcEEEEEc---CcCCceEEEEecCCCCCceeeeccccccccccccccc-----------------------eeeee
Confidence 999999999888 7999999999999555789999999999999999732 22222
Q ss_pred --ecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 162 --SVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 162 --~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
..|...+.+++|+ +++|++|+.||.|++||+++++ .+..+..|...|++++|+|++. .+|++|+.
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~---------~~~~~~~h~~~v~~v~fsp~g~-~~lasgs~ 278 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS---------CVLSSAVHSQCVTGLVFSPHSV-PFLASLSE 278 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----------CCEEEECCSSCEEEEEECSSSS-CCEEEEET
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc---------EEEEEcCCCCCEEEEEEccCCC-eEEEEEeC
Confidence 3455678888886 5688999999999999999765 5677888999999999999985 58999999
Q ss_pred CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC-EEEEeccCCcEEEEecCC
Q 022590 237 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 237 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~ 293 (294)
|+.|++||+++++. ..+ .+|...|++++|+|+++ +|++++.||.|++|++.+
T Consensus 279 D~~i~vwd~~~~~~---~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 279 DCSLAVLDSSLSEL---FRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp TSCEEEECTTCCEE---EEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CCeEEEEECCCCcE---EEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999999988752 233 37889999999999986 567899999999999865
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-48 Score=309.35 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=222.3
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.+..|.++|++++|+ |+++ +|++|+.||+|++||+.+++....+.+|.+.|++++|+| ++++|++|+.|++|++||
T Consensus 103 ~l~gh~~~V~~~~~~--p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFH--PVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178 (410)
T ss_dssp EEECCSSCEEEEEEC--SSSS-EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEE
T ss_pred eecccCCcEEEEEEc--CCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEe
Confidence 355899999999997 8898 999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.+++.+..+. +|...|.+++|+| ++.+|++|+.|++|++||+++ ...+..+.
T Consensus 179 ~~~~~~~~~~~---~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~-----------------------~~~~~~~~ 231 (410)
T 1vyh_C 179 FQGFECIRTMH---GHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQT-----------------------GYCVKTFT 231 (410)
T ss_dssp TTSSCEEECCC---CCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTT-----------------------CCEEEEEE
T ss_pred CCCCceeEEEc---CCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCC-----------------------CcEEEEEe
Confidence 99999888877 7999999999999 889999999999999999988 44566778
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCC-------------
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH------------- 227 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 227 (294)
+|...|.++.|+ +.++++++.|+.|++||+++++ ....+..|...+.+++|+|++.
T Consensus 232 ~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE---------CKAELREHRHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------eeeEecCCCceEEEEEEcCcccccchhhhcccccc
Confidence 899999999997 7899999999999999998664 5667788889999999999742
Q ss_pred -----cceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 228 -----YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 228 -----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+.+|++|+.|+.|++||+++++. ...+. +|...|++++|+|++++|++|+.||.|++||+++
T Consensus 303 ~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~--~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp -----CCEEEEEETTSEEEEEETTTTEE--EEEEE--CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred ccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEE--CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 35899999999999999998763 33333 7888999999999999999999999999999864
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.4e-48 Score=305.33 Aligned_cols=244 Identities=22% Similarity=0.382 Sum_probs=218.9
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.+..|.+.|.+++|+ |+|+ +|++|+.||+|++||+.+++.+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 145 ~l~~h~~~V~~v~~~--~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 145 TLKGHTDSVQDISFD--HSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp EECCCSSCEEEEEEC--TTSS-EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEE
T ss_pred EEeccCCcEEEEEEc--CCCC-EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 356899999999997 8898 999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.++.++..+. +|...|.++.|+| ++.+|++|+.|+.|++||+++ ......+.
T Consensus 221 ~~~~~~~~~~~---~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~-----------------------~~~~~~~~ 273 (410)
T 1vyh_C 221 VQTGYCVKTFT---GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVAT-----------------------KECKAELR 273 (410)
T ss_dssp TTTCCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------CCEEEEEC
T ss_pred CCCCcEEEEEe---CCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCC-----------------------CceeeEec
Confidence 99999998888 7999999999999 899999999999999999987 33455667
Q ss_pred cCCCceeeccee----------------------cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEE
Q 022590 163 VHSNYVDCNRWL----------------------GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 220 (294)
Q Consensus 163 ~~~~~i~~~~~~----------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 220 (294)
.|...|.++.|+ +.+|++|+.|+.|++||++++. .+..+..|...|.++
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~---------~~~~~~~h~~~v~~v 344 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM---------CLMTLVGHDNWVRGV 344 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEE
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc---------eEEEEECCCCcEEEE
Confidence 888889988885 3489999999999999998664 677788899999999
Q ss_pred EEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 221 KFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 221 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+|+|++ .+|++|+.||.|++||+.+.+.. ..+. .|...|++++|+|++++|++|+.||.|++|+++
T Consensus 345 ~~~~~g--~~l~s~s~D~~i~vwd~~~~~~~--~~~~--~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 345 LFHSGG--KFILSCADDKTLRVWDYKNKRCM--KTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EECSSS--SCEEEEETTTEEEEECCTTSCCC--EEEE--CCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEcCCC--CEEEEEeCCCeEEEEECCCCceE--EEEc--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999998 58999999999999999887643 3333 778899999999999999999999999999974
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-47 Score=292.21 Aligned_cols=243 Identities=14% Similarity=0.206 Sum_probs=220.9
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
++.|...|.+++|+ |++. ++++++.|+.|++||+.+++.+..+..|...+.+++|+| ++++|++|+.||.|++|++
T Consensus 76 l~gh~~~v~~~~~~--~~~~-~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 76 LEGHQLGVVSVDIS--HTLP-IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp ECCCSSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEET
T ss_pred eccCCCCEEEEEEC--CCCC-EEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEc
Confidence 56899999999997 8888 999999999999999999999999999999999999999 8999999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
++++....+. .|...|.+++|+| ++.+|++|+.||.|++||+++ ...+..+..
T Consensus 152 ~~~~~~~~~~---~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~-----------------------~~~~~~~~~ 204 (321)
T 3ow8_A 152 ESGKKEYSLD---TRGKFILSIAYSP-DGKYLASGAIDGIINIFDIAT-----------------------GKLLHTLEG 204 (321)
T ss_dssp TTCSEEEEEE---CSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------TEEEEEECC
T ss_pred CCCceeEEec---CCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCC-----------------------CcEEEEEcc
Confidence 9999888887 5888999999999 899999999999999999987 445667788
Q ss_pred CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 164 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
|..+|.+++|+ +++|++++.|+.|++||++..+ ....+..|...|.+++|+|++ .+|++++.|+.|+
T Consensus 205 h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~~~~sp~~--~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN---------LAGTLSGHASWVLNVAFCPDD--THFVSSSSDKSVK 273 (321)
T ss_dssp CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEE
T ss_pred cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc---------eeEEEcCCCCceEEEEECCCC--CEEEEEeCCCcEE
Confidence 99999999997 7899999999999999998654 567788899999999999998 5899999999999
Q ss_pred EEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 242 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+||+++.+ ....+. .|...|.+++|+|++++|++++.||.|++||..
T Consensus 274 iwd~~~~~--~~~~~~--~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 274 VWDVGTRT--CVHTFF--DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTTTE--EEEEEC--CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEeCCCCE--EEEEEc--CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999875 333443 778899999999999999999999999999963
No 6
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8e-47 Score=287.66 Aligned_cols=260 Identities=17% Similarity=0.204 Sum_probs=213.2
Q ss_pred CcccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC--ccccceecccCcceEEEEeCCC-CCceEEEeeCCCcE
Q 022590 2 CYVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN--EKLHKSFVGHGDSINEIRTQPL-KPSLVVSASKDESV 78 (294)
Q Consensus 2 ~~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~i 78 (294)
..+..|.+.|++++|+ |+|+ +||+|+.|++|+|||+.+ .+.+.++.+|.++|++++|++. ++++|++|+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s--~~g~-~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMD--YYGK-RMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEEC--CCCC-EEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 3457999999999998 9998 999999999999999974 4677889999999999999863 37899999999999
Q ss_pred EEEEcCCCc--eEEEeeccCCCCCceeEEEEecCC-CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 79 RLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 79 ~vwd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
++||+.+++ .+..+. +|...|.+++|+|+. +.+|++++.|+.|++||++....
T Consensus 80 ~iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--------------------- 135 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--------------------- 135 (297)
T ss_dssp EEEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC---------------------
T ss_pred EEEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc---------------------
Confidence 999998874 444454 699999999999932 78999999999999999986310
Q ss_pred eceEEeecCCCceeecceec---------------ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEE
Q 022590 156 FPVFIASVHSNYVDCNRWLG---------------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 220 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~~---------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 220 (294)
.....+..|...|.+++|+. ++|++++.|+.|++||++.+.. .......+..|...|.++
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~-----~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-----TYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT-----EEEEEEEECCCSSCEEEE
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc-----eEEEEEEecCCCCceEEE
Confidence 11245678899999999973 4899999999999999986542 222456778899999999
Q ss_pred EEcccCC-cceEEEEcCCCeEEEEeccCCCcee-eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 221 KFSCDFH-YNAAAIGNREGKIFVWELQSSPPVL-IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 221 ~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+|+|++. +.+|++++.|+.|++||++...... ...+....|...|.+++|+|++++||+++.||.|++|+...
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9999851 2689999999999999998753211 12222236678899999999999999999999999999763
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.2e-47 Score=290.02 Aligned_cols=246 Identities=19% Similarity=0.335 Sum_probs=215.4
Q ss_pred ccccCceeEEEEEeec--CCCceEEEEeecCCeEEEEEcCCccc--cceecccCcceEEEEeCCCCCceEEEeeCCCcEE
Q 022590 4 VDQKEESFYTVSWACN--VDGIPFLVAGGINGIIRVIDVSNEKL--HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVR 79 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~--~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 79 (294)
++.|++.|++++|++. +++. +|++|+.|++|+||++.+++. ...+.+|...|.+++|++ ++.++++++.|++|+
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~-~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIR 105 (321)
T ss_dssp TTSSSSCEEEEEEC-------C-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred cccCCCcEEEEEEecCCCCCCC-EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEE
Confidence 3589999999999843 2466 899999999999999987653 456889999999999999 889999999999999
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
+||+.+++.+..+. .|...+.+++|+| ++.+|++++.||.|++||++. .....
T Consensus 106 lWd~~~~~~~~~~~---~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~-----------------------~~~~~ 158 (321)
T 3ow8_A 106 LWDLENGKQIKSID---AGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVES-----------------------GKKEY 158 (321)
T ss_dssp EEETTTTEEEEEEE---CCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTT-----------------------CSEEE
T ss_pred EEECCCCCEEEEEe---CCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCC-----------------------CceeE
Confidence 99999999988887 5888999999999 889999999999999999987 33455
Q ss_pred EeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 160 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.+..|...|.+++|+ +++|++++.|+.|++||+++++ .+..+..|..+|.+++|+|++ .+|++|+.|
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~spd~--~~l~s~s~d 227 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---------LLHTLEGHAMPIRSLTFSPDS--QLLVTASDD 227 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCCCEEEECTTS--CEEEEECTT
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------EEEEEcccCCceeEEEEcCCC--CEEEEEcCC
Confidence 667788899999997 8899999999999999998664 677788889999999999998 699999999
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|.|++||+++.+. ...+. +|...|.+++|+|++++|++++.||.|++||+++
T Consensus 228 g~i~iwd~~~~~~--~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 228 GYIKIYDVQHANL--AGTLS--GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp SCEEEEETTTCCE--EEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEECCCcce--eEEEc--CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999998763 33444 7889999999999999999999999999999874
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-46 Score=289.45 Aligned_cols=249 Identities=21% Similarity=0.327 Sum_probs=211.7
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC-----ccccceecccCcceEEEEeCCCCCceEEEeeCCCc
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDES 77 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 77 (294)
.++.|.++|++++|+ |++..+|++|+.|++|++|++.+ +.++..+.+|...|++++|+| ++.+|++|+.|++
T Consensus 12 ~l~gH~~~V~~l~~~--~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~ 88 (319)
T 3frx_A 12 TLEGHNGWVTSLATS--AGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKT 88 (319)
T ss_dssp EECCCSSCEEEEEEC--SSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred EEccccceEEEEEcc--CCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCE
Confidence 467999999999998 65533999999999999999864 345678899999999999999 8999999999999
Q ss_pred EEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 78 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 78 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
|++||+.+++.+..+. +|...|.+++|+| ++.+|++|+.|++|++||++. ..
T Consensus 89 v~~wd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~------------------------~~ 140 (319)
T 3frx_A 89 LRLWDVATGETYQRFV---GHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG------------------------QC 140 (319)
T ss_dssp EEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS------------------------CE
T ss_pred EEEEECCCCCeeEEEc---cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC------------------------Ce
Confidence 9999999999998888 7999999999999 889999999999999999975 23
Q ss_pred eEEeecCCCceeecceec--------ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcc
Q 022590 158 VFIASVHSNYVDCNRWLG--------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~~--------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (294)
...+.+|...|.++.|.+ ..+++++.|+.|++||+++.+ ....+..|...|.+++|+|++ .
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------~~~~~~~h~~~v~~~~~sp~g--~ 209 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---------IEADFIGHNSNINTLTASPDG--T 209 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---------EEEEECCCCSCEEEEEECTTS--S
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---------hheeecCCCCcEEEEEEcCCC--C
Confidence 456678999999998852 379999999999999998653 566778899999999999999 6
Q ss_pred eEEEEcCCCeEEEEeccCCCceeeeec--------------------------------------c------ccccCCCe
Q 022590 230 AAAIGNREGKIFVWELQSSPPVLIARL--------------------------------------S------HAQSKSPI 265 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------------------------------~------~~~~~~~v 265 (294)
+|++++.||.|++||+.+.+....... . ...+...+
T Consensus 210 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcce
Confidence 999999999999999987643211100 0 01234568
Q ss_pred EEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 266 RQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 266 ~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.+++|+|+|++|++|+.||.|++||+.+
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred eEEEECCCCCEEEEeecCceEEEEEEee
Confidence 8999999999999999999999999865
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.4e-46 Score=288.91 Aligned_cols=245 Identities=19% Similarity=0.260 Sum_probs=215.8
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.++|++++|+ |+++ +|++|+.||.|++||..+++.+..+..|...|.+++|+| ++++|++|+.|+.|++|++
T Consensus 51 l~gH~~~v~~~~~s--~d~~-~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 51 LRGHLAKIYAMHWG--TDSR-LLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEET
T ss_pred ecCCCCceEEEEEC--CCCC-EEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEEC
Confidence 56899999999997 8998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCc----eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 84 QTGI----CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 84 ~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
.+++ ....+. +|.+.|.++.|++ ++. +++++.|+.|++||+++ .....
T Consensus 127 ~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~-l~s~s~d~~i~~wd~~~-----------------------~~~~~ 178 (340)
T 1got_B 127 KTREGNVRVSRELA---GHTGYLSCCRFLD-DNQ-IVTSSGDTTCALWDIET-----------------------GQQTT 178 (340)
T ss_dssp TTCSBSCEEEEEEE---CCSSCEEEEEEEE-TTE-EEEEETTSCEEEEETTT-----------------------TEEEE
T ss_pred ccCCCcceeEEEec---CCCccEEEEEECC-CCc-EEEEECCCcEEEEECCC-----------------------CcEEE
Confidence 8753 334444 7999999999998 655 89999999999999987 44566
Q ss_pred EeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 160 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.+.+|...|.+++|+ ++++++++.|+.|++||++++. ....+..|...|.+++|+|++ .+|++|+.|
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~d 247 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---------CRQTFTGHESDINAICFFPNG--NAFATGSDD 247 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---------EEEEECCCSSCEEEEEECTTS--SEEEEEETT
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---------eEEEEcCCcCCEEEEEEcCCC--CEEEEEcCC
Confidence 778899999999997 7799999999999999998764 567788889999999999998 689999999
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|.|++||+++.+.. ..+.+..+...|++++|+|+|++|++|+.||.|++||+.+
T Consensus 248 ~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 248 ATCRLFDLRADQEL--MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp SCEEEEETTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEECCCCcEE--EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 99999999987533 3333334556899999999999999999999999999864
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-46 Score=293.86 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=201.0
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc----eecccCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK----SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
+|...|++++|+ |+++ +++++.||+|+|||+.+++... ...+|...|++++|+| ++++|++|+.|++|++|
T Consensus 92 ~~~~~V~~~~~s--~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 92 QTEAGVTDVAWV--SEKG--ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp ECSSCEEEEEEE--TTTE--EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEc--CCCC--EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 688899999998 8885 6678889999999998876543 2347999999999999 89999999999999999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
|+.+++.+..+. +|...|++++|+|.+..++++++.||.|++||+++.... .....
T Consensus 167 d~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~---------------------~~~~~ 222 (357)
T 4g56_B 167 DLSQKAVLKSYN---AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA---------------------TRIDF 222 (357)
T ss_dssp ETTTTEEEEEEC---CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB---------------------CBCCC
T ss_pred ECCCCcEEEEEc---CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee---------------------eeeee
Confidence 999999998888 799999999999955568999999999999999874211 11223
Q ss_pred ecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 162 SVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 162 ~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
..|...+.+++|+ +.+|++|+.|+.|++||+++++ .+..+..+...|++++|+|++. .+|++|+.||
T Consensus 223 ~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~---------~~~~~~~~~~~v~~l~~sp~~~-~~lasgs~D~ 292 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD---------SAQTSAVHSQNITGLAYSYHSS-PFLASISEDC 292 (357)
T ss_dssp TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG---------GCEEECCCSSCEEEEEECSSSS-CCEEEEETTS
T ss_pred ccccccccchhhhhcccceEEEeecccceeEEECCCCc---------EeEEEeccceeEEEEEEcCCCC-CEEEEEeCCC
Confidence 4567788999996 5689999999999999998765 4667788889999999999975 5899999999
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEcc-CCCEEEEeccCCcEEEEecCC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++||+++++. ...+ +|...|++++|+| ++++|++++.||.|++|++..
T Consensus 293 ~i~iwd~~~~~~--~~~~---~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 293 TVAVLDADFSEV--FRDL---SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CEEEECTTSCEE--EEEC---CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEECCCCcE--eEEC---CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999999988753 2222 6789999999998 799999999999999999864
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.1e-46 Score=294.95 Aligned_cols=254 Identities=20% Similarity=0.299 Sum_probs=202.6
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCC--------------------
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP-------------------- 63 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-------------------- 63 (294)
+++|.++|++++|+ |+++ +|++|+.||+|+|||+.+++....+..|...|.+++|+|
T Consensus 62 l~gH~~~V~~~~~s--p~~~-~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 62 LQGHSGKVYSLDWT--PEKN-WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp ECCCSSCEEEEEEC--TTSS-CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred ccccccEEEEEEEc--CCCC-EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 56899999999998 8998 999999999999999988776666655555555555554
Q ss_pred -----------------------------CCCceEEEeeCCCcEEEEEcCCCceEEEeec--cCCCCCceeEEEEecCCC
Q 022590 64 -----------------------------LKPSLVVSASKDESVRLWNVQTGICILIFAG--AGGHRNEVLSVDFHPSDI 112 (294)
Q Consensus 64 -----------------------------~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~ 112 (294)
.++..|++|+.|++|++||+.+++.+..+.. ..+|...|.+++|+|.++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 2234566777777777777777776665521 136899999999988688
Q ss_pred ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEe
Q 022590 113 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLW 190 (294)
Q Consensus 113 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iw 190 (294)
++|++|+.|+.|++||++.. ......+.+|...|.+++|+ +++|++++.|++|++|
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~----------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRIT----------------------SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276 (380)
T ss_dssp CEEEEEETTSCEEEEETTTT----------------------CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEE
T ss_pred CEEEEEECCCeEEEEECCCC----------------------CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEE
Confidence 99999999999999999852 23456778899999999997 7899999999999999
Q ss_pred cCCCCCCCCCCCCceeeeeeecC-------CCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCC
Q 022590 191 EPKMKEQSPGEGTADILQKYPVP-------ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 263 (294)
Q Consensus 191 d~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 263 (294)
|+++++ .+..+..+ ...+.+++|+|++ .++++|+.||.|++||+...+..........+|..
T Consensus 277 d~~~~~---------~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 277 DMRTGH---------QLQVYNREPDRNDNELPIVTSVAFSISG--RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG 345 (380)
T ss_dssp ETTTTE---------EEEEECCCCSSSCCSSCSCSEEEECSSS--SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC
T ss_pred ECCCCc---------EEEEecccccccccccCceEEEEECCCC--CEEEEEECCCCEEEEECCCCceEEEEecccCCCCC
Confidence 999765 23333221 2348899999999 69999999999999999887644333222347889
Q ss_pred CeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 264 PIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 264 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++++|+|+|++|++|+.||.|++|++..
T Consensus 346 ~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 999999999999999999999999999864
No 12
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.5e-46 Score=286.48 Aligned_cols=255 Identities=17% Similarity=0.207 Sum_probs=202.7
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCC-CCceEEEeeCCCcEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPL-KPSLVVSASKDESVRL 80 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~i~v 80 (294)
+..|++.|++++|+ |+|+ +||+|+.|++|+|||+.+++ .+..+.+|.++|++++|+|. ++++|++|+.|++|++
T Consensus 9 ~~~H~~~V~~v~~s--~~g~-~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 9 DTSHEDMIHDAQMD--YYGT-RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -----CCEEEEEEC--GGGC-EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccccCeEEEeeEc--CCCC-EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 45899999999998 8898 99999999999999998764 46778999999999999862 4789999999999999
Q ss_pred EEcCCCc--eEEEeeccCCCCCceeEEEEecCC-CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 81 WNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 81 wd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
||+++++ ....+. +|...|.+++|+|+. +.+|++|+.|+.|++||++.... ...
T Consensus 86 Wd~~~~~~~~~~~~~---~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~--------------------~~~ 142 (316)
T 3bg1_A 86 WREENGTWEKSHEHA---GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ--------------------WEV 142 (316)
T ss_dssp ECCSSSCCCEEEEEC---CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC--------------------EEE
T ss_pred EECCCCcceEEEEcc---CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC--------------------cce
Confidence 9998874 444555 699999999999932 78999999999999999986311 011
Q ss_pred eEEeecCCCceeecceec-------------------ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee
Q 022590 158 VFIASVHSNYVDCNRWLG-------------------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 218 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~~-------------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 218 (294)
......|...+.++.|++ .+|++++.|+.|++||++... .......+..|...|.
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~------~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG------QWKEEQKLEAHSDWVR 216 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTS------CEEEEECCBCCSSCEE
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCC------ccceeeecccCCCceE
Confidence 223456777788887763 589999999999999996432 2235567788899999
Q ss_pred EEEEcccCC--cceEEEEcCCCeEEEEeccCCCc--eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 219 FIKFSCDFH--YNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 219 ~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+++|+|++. ..+|++++.||.|++|++++... .....+. .|...|.+++|+|++++|++++.||.|++|+..
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999862 25899999999999999986321 1111122 567899999999999999999999999999975
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5e-45 Score=284.22 Aligned_cols=246 Identities=15% Similarity=0.223 Sum_probs=215.1
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
++.|.++|++++|+ |+++ +|++|+.||+|++||..+++....+..|...|.+++|+| ++.+|++|+.|+.+++|++
T Consensus 60 l~gH~~~V~~~~~s--~d~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 60 LKGHGNKVLCMDWC--KDKR-RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EECCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEEC
T ss_pred ecCCCCeEEEEEEC--CCCC-EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEE
Confidence 56899999999998 8998 999999999999999999998889999999999999999 8999999999999999998
Q ss_pred CCC------ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 84 QTG------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 84 ~~~------~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
... .....+. +|...|.+++|+| ++..|++++.|++|++||+++ ...
T Consensus 136 ~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~-----------------------~~~ 188 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVA---MHTNYLSACSFTN-SDMQILTASGDGTCALWDVES-----------------------GQL 188 (354)
T ss_dssp CCCTTCCSGGGCEEEE---ECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTT-----------------------CCE
T ss_pred eccccccccccceeee---ccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCC-----------------------CeE
Confidence 643 2334444 6999999999999 888899999999999999988 445
Q ss_pred eEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE
Q 022590 158 VFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 233 (294)
+..+.+|...|.++.++ +++|++++.||.|++||+++++ .+..+..|...|.+++|+|++ .+|++
T Consensus 189 ~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---------~~~~~~~h~~~v~~v~~~p~~--~~l~s 257 (354)
T 2pbi_B 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---------CVQAFETHESDVNSVRYYPSG--DAFAS 257 (354)
T ss_dssp EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECTTS--SEEEE
T ss_pred EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---------EEEEecCCCCCeEEEEEeCCC--CEEEE
Confidence 66778899999998884 5799999999999999999765 577788899999999999998 68999
Q ss_pred EcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 234 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++.|+.|++||++..+... .+....+...+.+++|+|++++|++|+.|+.|++||+.+
T Consensus 258 ~s~D~~v~lwd~~~~~~~~--~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 258 GSDDATCRLYDLRADREVA--IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp EETTSCEEEEETTTTEEEE--EECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EeCCCeEEEEECCCCcEEE--EEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 9999999999999875332 233224446789999999999999999999999999854
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.9e-45 Score=282.57 Aligned_cols=239 Identities=20% Similarity=0.356 Sum_probs=208.4
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc----ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK----LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
..|...|.+++|+ |+|+ +|++|+.|+.|++|++.+.+ ....+.+|.+.|.++.|++ ++ .+++++.|++|++
T Consensus 94 ~~~~~~v~~~~~s--~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~ 168 (340)
T 1got_B 94 PLRSSWVMTCAYA--PSGN-YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCAL 168 (340)
T ss_dssp ECSSSCEEEEEEC--TTSS-EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEE
T ss_pred ecCCccEEEEEEC--CCCC-EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEE
Confidence 4688899999998 8998 99999999999999997753 4556788999999999998 54 5899999999999
Q ss_pred EEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 81 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
||+.+++.+..+. +|...|.+++|+| ++.+|++|+.|+.|++||+++ ......
T Consensus 169 wd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~-----------------------~~~~~~ 221 (340)
T 1got_B 169 WDIETGQQTTTFT---GHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVRE-----------------------GMCRQT 221 (340)
T ss_dssp EETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------CSEEEE
T ss_pred EECCCCcEEEEEc---CCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCC-----------------------CeeEEE
Confidence 9999999988887 7999999999999 889999999999999999987 344667
Q ss_pred eecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee--cCCCCeeEEEEcccCCcceEEEEcC
Q 022590 161 ASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP--VPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 161 ~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
+..|...|.+++|+ +++|++++.|+.|++||++..+ .+..+. .+...+.+++|+|++ .+|++|+.
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g--~~l~~g~~ 290 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ---------ELMTYSHDNIICGITSVSFSKSG--RLLLAGYD 290 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCTTCCSCEEEEEECTTS--SEEEEEET
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc---------EEEEEccCCcccceEEEEECCCC--CEEEEECC
Confidence 78899999999997 7899999999999999998654 233333 223579999999999 69999999
Q ss_pred CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 237 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 237 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
||.|++||+.+.+. ...+. +|..+|.+++|+|+|++|++|+.||.|++||
T Consensus 291 d~~i~vwd~~~~~~--~~~~~--~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 291 DFNCNVWDALKADR--AGVLA--GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSEEEEEETTTCCE--EEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCeEEEEEcccCcE--eeEee--cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999988763 33333 7889999999999999999999999999997
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-44 Score=280.99 Aligned_cols=261 Identities=18% Similarity=0.248 Sum_probs=211.6
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc--cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE--KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
+.|.+.|.+++|+ |+|+ +|++|+.|+.|++|+..++ +.+..+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 58 ~~h~~~v~~~~~s--p~g~-~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 58 EGHQRTVRKVAWS--PCGN-YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp SSCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred cccCCcEEEEEEC--CCCC-EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEE
Confidence 4799999999998 8998 9999999999999998776 45678899999999999999 899999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.++..........+|...|.+++|+| ++.+|++++.|+.|++||++... ......+.
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~---------------------~~~~~~~~ 191 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDD---------------------WVCCATLE 191 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTE---------------------EEEEEEEC
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCC---------------------EEEEEEec
Confidence 987754433333337999999999999 88999999999999999987621 12345678
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCC------CCceeeeeeec-CCCCeeEEEEcccCCcceEEE
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE------GTADILQKYPV-PECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~ 233 (294)
+|...|.+++|+ +++|++++.|++|++||.......... .....+..+.. |...|..++|+|++ ..|++
T Consensus 192 ~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~--~~l~s 269 (345)
T 3fm0_A 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT--GALAT 269 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT--CCEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC--CEEEE
Confidence 899999999997 789999999999999997543221110 11122333433 67889999999998 58999
Q ss_pred EcCCCeEEEEeccCCCce----eeee-ccccccCCCeEEEEEccCC-CEEEEeccCCcEEEEecCC
Q 022590 234 GNREGKIFVWELQSSPPV----LIAR-LSHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~~~----~~~~-~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~vw~~~~ 293 (294)
++.|+.|++|+....... .... ....+|...|++++|+|++ .+||+|+.||.|++|++.+
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 999999999998765311 1111 1134788999999999998 4999999999999999875
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2e-44 Score=275.37 Aligned_cols=245 Identities=21% Similarity=0.305 Sum_probs=207.4
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|..+|.+++|+ |+++ +|++|+.|+.|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.|++|++||+
T Consensus 51 ~~~~~~~v~~~~~~--~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 51 IQVTETPVRAGKFI--ARKN-WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EECCSSCEEEEEEE--GGGT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEG
T ss_pred eeccCCcEEEEEEe--CCCC-EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEEC
Confidence 45788999999998 8888 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCce-EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+++.. ...+. +|...|.+++|+|.++.+|++|+.|++|++||++... .......
T Consensus 127 ~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~----------------------~~~~~~~ 181 (304)
T 2ynn_A 127 ENNWALEQTFE---GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST----------------------PNFTLTT 181 (304)
T ss_dssp GGTTEEEEEEC---CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS----------------------CSEEEEC
T ss_pred CCCcchhhhhc---ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----------------------ccceecc
Confidence 88744 44455 7999999999999677899999999999999998631 1122234
Q ss_pred cCCCceeeccee----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 163 VHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 163 ~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
.|...+..+.|. +.+|++++.|+.|++||+++++ .+..+..|...+..++|+|++ .+|++|+.||
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~---------~~~~~~~h~~~v~~~~~~p~~--~~l~s~s~Dg 250 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS---------CVATLEGHMSNVSFAVFHPTL--PIIISGSEDG 250 (304)
T ss_dssp CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEEEECSSS--SEEEEEETTS
T ss_pred CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc---------cceeeCCCCCCEEEEEECCCC--CEEEEEcCCC
Confidence 566778877774 5699999999999999998654 678888999999999999998 5899999999
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC--EEEEeccCCcEEEEecCC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS--TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~i~vw~~~~ 293 (294)
.|++||+++.+. ...+. .|...+.+++|+|++. ++++|+.|| +.+|++..
T Consensus 251 ~i~iWd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 251 TLKIWNSSTYKV--EKTLN--VGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp CEEEEETTTCCE--EEEEC--CSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred eEEEEECCCCce--eeecc--CCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 999999998863 34444 5667899999999875 577777666 77787753
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=281.40 Aligned_cols=253 Identities=21% Similarity=0.323 Sum_probs=209.4
Q ss_pred cccccCc-eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc---eecccCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 3 YVDQKEE-SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK---SFVGHGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 3 ~~~~h~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
.+..|.+ .|++++|+ |+|+ +||+|+.|++|+|||+.+++... ...+|...|++++|+| ++++|++|+.|++|
T Consensus 10 ~~~~h~~~~v~~l~~s--p~g~-~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWN--PAGT-LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATT 85 (345)
T ss_dssp EECCSTTSCEEEEEEC--TTSS-CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eecCCCCCcEEEEEEC--CCCC-EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcE
Confidence 3557877 99999998 9998 99999999999999998875332 2368999999999999 89999999999999
Q ss_pred EEEEcCCCc--eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 79 RLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 79 ~vwd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
++|++..+. .+..+. +|...|.+++|+| ++.+|++|+.|+.|++||++.... ..
T Consensus 86 ~iw~~~~~~~~~~~~~~---~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~--------------------~~ 141 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLE---GHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDE--------------------YE 141 (345)
T ss_dssp EEEEECCC-EEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSC--------------------EE
T ss_pred EEEEccCCCeEEEEEcc---CCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCC--------------------eE
Confidence 999998764 455555 7999999999999 889999999999999999986311 22
Q ss_pred ceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 157 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 157 ~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
....+..|...|.+++|+ +++|++++.|+.|++||.+..+ ......+..|...|.+++|+|++ .+|+++
T Consensus 142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~-------~~~~~~~~~h~~~v~~l~~sp~g--~~l~s~ 212 (345)
T 3fm0_A 142 CVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD-------WVCCATLEGHESTVWSLAFDPSG--QRLASC 212 (345)
T ss_dssp EEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECTTS--SEEEEE
T ss_pred EEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC-------EEEEEEecCCCCceEEEEECCCC--CEEEEE
Confidence 345677899999999997 7899999999999999987542 12456778889999999999998 689999
Q ss_pred cCCCeEEEEeccCCCce-------------eeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 235 NREGKIFVWELQSSPPV-------------LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~-------------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+.|+.|++|+....... ....+. ..|...|.+++|+|++..|++++.|+.|++|+.++
T Consensus 213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS-GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEEC-SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT
T ss_pred eCCCeEEEeccccCCCCccceeeccCCccceeEEec-CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC
Confidence 99999999997543211 111111 13778899999999999999999999999999753
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-44 Score=279.55 Aligned_cols=253 Identities=17% Similarity=0.231 Sum_probs=196.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC-------ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEE
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-------EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVR 79 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 79 (294)
|.+.|++++|+ |+++ +|++|+.|++|+|||+.. .+....+.+|...|++++|+| ++++|++|+.|++|+
T Consensus 57 h~~~v~~v~~s--p~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~ 132 (330)
T 2hes_X 57 HKKAIRSVAWR--PHTS-LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVW 132 (330)
T ss_dssp CCSCEEEEEEC--TTSS-EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEE
T ss_pred ccCCEEEEEEC--CCCC-EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEE
Confidence 99999999998 8998 999999999999999853 345667889999999999999 899999999999999
Q ss_pred EEEcCCC----ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 80 LWNVQTG----ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 80 vwd~~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
+||+... +.+..+. +|...|.+++|+| ++.+|++|+.|++|++||.+... .
T Consensus 133 iwd~~~~~~~~~~~~~~~---~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~---------------------~ 187 (330)
T 2hes_X 133 IWETDESGEEYECISVLQ---EHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDD---------------------W 187 (330)
T ss_dssp EEECCTTCCCCEEEEEEC---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTE---------------------E
T ss_pred EEeccCCCCCeEEEEEec---cCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCC---------------------e
Confidence 9999432 3444555 7999999999999 88999999999999999987521 2
Q ss_pred eceEEeecCCCceeecceec----ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCeeEEEEcccCCcce
Q 022590 156 FPVFIASVHSNYVDCNRWLG----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKFSCDFHYNA 230 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 230 (294)
.++..+.+|...|.++.|+. .+|++++.|++|++||++....... ........+.. |...|.+++|++++ +
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~-~~~~~~~~~~~~h~~~v~~v~~s~~~---~ 263 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ-QEWVCEAILPDVHKRQVYNVAWGFNG---L 263 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC-EEEEEEEECCSCCSSCEEEEEECTTS---C
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc-ceeEEeeecccccccceEEEEEcCCC---E
Confidence 34667789999999999973 4799999999999999976532110 01122333433 77889999999664 7
Q ss_pred EEEEcCCCeEEEEeccCCCceeeeeccccccCC-CeEEEEEcc--CCCEEEEeccCCcEEEEecCC
Q 022590 231 AAIGNREGKIFVWELQSSPPVLIARLSHAQSKS-PIRQTAMSY--DGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 231 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|++++.||.|++||..+++....... ...|.. .|.+++|+| ++++|++|+.||.|++||++.
T Consensus 264 l~s~~~dg~v~iw~~~~~~~~~~~~~-~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 264 IASVGADGVLAVYEEVDGEWKVFAKR-ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEE-SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEeCCCEEEEEEcCCCceEEEecc-ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999999999987642222221 125655 899999999 789999999999999999875
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-43 Score=272.03 Aligned_cols=244 Identities=23% Similarity=0.418 Sum_probs=210.1
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.++|++++|+ |+++ +|++|+.||.|++|+..+++....+.+|...|.+++|+| ++++|++|+.|+.|++||+
T Consensus 19 ~~gh~~~v~~~~~s--~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 19 LAGHTKAVSSVKFS--PNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred EcccCCcEEEEEEC--CCCC-EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEEC
Confidence 46899999999998 8998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.+++.+..+. +|...|.+++|+| ++.+|++|+.|+.|++||+++ ......+..
T Consensus 95 ~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~-----------------------~~~~~~~~~ 147 (312)
T 4ery_A 95 SSGKCLKTLK---GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKT-----------------------GKCLKTLPA 147 (312)
T ss_dssp TTCCEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTT-----------------------CCEEEEECC
T ss_pred CCCcEEEEEc---CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCC-----------------------CEEEEEecC
Confidence 9999998888 6999999999999 889999999999999999987 344566778
Q ss_pred CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-ecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 164 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
|..+|.++.|+ +++|++++.|+.|++||+++++ .+..+ ..+...+..++|+|++ .++++++.||.|
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~d~~i 216 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ---------CLKTLIDDDNPPVSFVKFSPNG--KYILAATLDNTL 216 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------EEEEECCSSCCCEEEEEECTTS--SEEEEEETTTEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc---------eeeEEeccCCCceEEEEECCCC--CEEEEEcCCCeE
Confidence 99999999997 7899999999999999998764 23333 3455678999999999 689999999999
Q ss_pred EEEeccCCCceeeeeccccccCC---CeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLSHAQSKS---PIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++||+++.+. ...+. .|.. .+......+++++|++|+.||.|++||+++
T Consensus 217 ~iwd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 217 KLWDYSKGKC--LKTYT--GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEEETTTTEE--EEEEC--SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred EEEECCCCcE--EEEEE--ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 9999998753 33333 3322 233333446889999999999999999875
No 20
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.5e-45 Score=284.35 Aligned_cols=286 Identities=40% Similarity=0.780 Sum_probs=225.3
Q ss_pred ccCceeEEEEEeecCC--CceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEESFYTVSWACNVD--GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.|.+.|++++|++... |+ +|++|+.||.|++||+.+++.+..+.+|...|++++|+|.++.+|++|+.||.|++||+
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHP-LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCE-EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEeccCCCCCCC-EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 3678899999994432 66 99999999999999999999999999999999999999977889999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccce--eecCCCC--CCC-Cceeeece
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSF--TWTDLPS--KFP-TKYVQFPV 158 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~~~~--~~~-~~~~~~~~ 158 (294)
.+++.+..+....+|...|.+++|+| ++.+|++++.||.|++||++.......... .+..... ... ........
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred ecCeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 99998888844347999999999999 889999999999999999997543221110 1111000 000 01111223
Q ss_pred EEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCC-----CCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE
Q 022590 159 FIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 233 (294)
.....|...|.++.|+++++++++.|+.|++||+++.... ........+..+..+...+.+++|+|+..+.+|++
T Consensus 225 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 225 STRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp EECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred ccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 4455699999999999999999999999999999876531 11122345777888889999999999932279999
Q ss_pred EcCCCeEEEEeccCCCcee--eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 234 GNREGKIFVWELQSSPPVL--IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|+.||.|++||+.+++... ...+....|..+|++++|+|++++|++++.||.|++||+.+
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999886542 22333223378999999999999999999999999999863
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-44 Score=281.51 Aligned_cols=254 Identities=20% Similarity=0.344 Sum_probs=207.8
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
.|.+++|+ |+|+ +|++|+.||.|++||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|++||+++++..
T Consensus 125 ~v~~v~~s--~dg~-~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 125 YIRSVCFS--PDGK-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp BEEEEEEC--TTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEEC--CCCC-EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeE
Confidence 48899997 9998 999999999999999999999999999999999999999 8899999999999999999999988
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
..+. +...+.+++|+|.++.+|++|+.|+.|++||+++....... ........+|...|.
T Consensus 201 ~~~~----~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~----------------~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 201 LTLS----IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL----------------DSENESGTGHKDSVY 260 (393)
T ss_dssp EEEE----CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE----------------C------CCCSSCEE
T ss_pred EEEE----cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee----------------cccccCCCCCCCCEE
Confidence 8776 77789999999978899999999999999999873211100 011122357899999
Q ss_pred eccee--cceEEEeeCCCeEEEecCCCCCCCCCC---CCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 170 CNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE---GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 170 ~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
+++|+ +++|++++.|+.|++||++........ ........+..|...+.+++|+|++ .+|++|+.||.|++||
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLFWD 338 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG--CEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC--CEEEEEeCCCeEEEEE
Confidence 99997 789999999999999999875432111 1123455677888899999999998 6899999999999999
Q ss_pred ccCCCceeeeeccccccCCCeEEEEEcc------CCCEEEEeccCCcEEEEecCC
Q 022590 245 LQSSPPVLIARLSHAQSKSPIRQTAMSY------DGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++++++. ..+. +|...|.+++|++ ++++|++|+.||.|++|+++.
T Consensus 339 ~~~~~~~--~~l~--~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 339 KKSGNPL--LMLQ--GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TTTCCEE--EEEE--CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCCeEE--EEEC--CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9988743 3333 7889999999986 688999999999999999863
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.7e-44 Score=277.03 Aligned_cols=248 Identities=17% Similarity=0.320 Sum_probs=203.9
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|...|++++|+ |++. ++++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+
T Consensus 72 l~~h~~~V~~~~~~--~~~~-~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 72 LTGHNHFVSDLALS--QENC-FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp ECCCSSCEEEEEEC--SSTT-EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEES
T ss_pred hccCCCceEEEEEC--CCCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEec
Confidence 45799999999997 8898 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCC----------ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDI----------YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~----------~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
. +..........+|...|.+++|+| ++ .+|++++.||.|++||...
T Consensus 148 ~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------------- 203 (343)
T 2xzm_R 148 L-GECKFSSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNF---------------------- 203 (343)
T ss_dssp S-SCEEEECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTT----------------------
T ss_pred c-CCceeeeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCC----------------------
Confidence 7 444444443346889999999999 54 6899999999999999543
Q ss_pred eeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceE
Q 022590 154 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 231 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 231 (294)
.....+..|...|.+++|+ +++|++++.|+.|++||++.... ....+ .+...+.+++|+|++ .++
T Consensus 204 --~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~--------~~~~~-~~~~~v~~v~~sp~~--~~l 270 (343)
T 2xzm_R 204 --QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY--------PQREF-DAGSTINQIAFNPKL--QWV 270 (343)
T ss_dssp --EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS--------CSEEE-ECSSCEEEEEECSSS--CEE
T ss_pred --ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc--------cceee-cCCCcEEEEEECCCC--CEE
Confidence 2345677899999999997 78999999999999999954332 12222 234569999999998 456
Q ss_pred EEEcCCCeEEEEeccCCCceeeeecc---------ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 232 AIGNREGKIFVWELQSSPPVLIARLS---------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 232 ~~~~~dg~i~i~d~~~~~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++ +.|+.|++||+.+.+......+. ..+|...|.+++|+|+|++|++|+.||.|++|++++
T Consensus 271 a~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 271 AV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred EE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 54 46788999999887644322222 125778899999999999999999999999999864
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=279.10 Aligned_cols=244 Identities=17% Similarity=0.194 Sum_probs=194.9
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC-----------ccccceecccCcceEEEEeCCCCCceEEEeeC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-----------EKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 74 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 74 (294)
.|+..|.+++|+ |||+ +|++++ |+++++||... .........|...|.+++|+| + ..|++|+.
T Consensus 28 ~~~~~v~~~~fs--~dG~-~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~s~ 101 (344)
T 4gqb_B 28 CMERQLEAARYR--SDGA-LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVASD 101 (344)
T ss_dssp SCCSEEEEEEEC--TTSC-EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEEET
T ss_pred cccCCEEEEEEC--CCCC-EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEEEC
Confidence 567889999997 9998 787776 77788886321 111122234677899999999 5 46889999
Q ss_pred CCcEEEEEcCCCceEEEeec-cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 75 DESVRLWNVQTGICILIFAG-AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
||+|++||+.+++.+..+.. ..+|...|++++|+| ++.+|++|+.|++|++||+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~---------------------- 158 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQ---------------------- 158 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT----------------------
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCC----------------------
Confidence 99999999998876544331 236999999999999 899999999999999999998
Q ss_pred eeeceEEeecCCCceeeccee--c-ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee--ecCCCCeeEEEEcccCCc
Q 022590 154 VQFPVFIASVHSNYVDCNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHY 228 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~ 228 (294)
...+..+.+|...|.++.|+ + .+|++++.|+.|++||+++++. ...+ ..+...+.+++|+|++.
T Consensus 159 -~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~p~~~- 227 (344)
T 4gqb_B 159 -QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---------ASQIGCSAPGYLPTSLAWHPQQS- 227 (344)
T ss_dssp -TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC---------EEECC----CCCEEEEEECSSCT-
T ss_pred -CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce---------eeeeecceeeccceeeeecCCCC-
Confidence 45677888999999999997 3 5789999999999999997752 2222 33456788999999765
Q ss_pred ceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC-CEEEEeccCCcEEEEecCC
Q 022590 229 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 229 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~vw~~~~ 293 (294)
.++++|+.||.|++||+++++.. ..+. +|...|++++|+|++ ++|++|+.||.|+|||+++
T Consensus 228 ~~l~sg~~dg~v~~wd~~~~~~~--~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKSTSCV--LSSA--VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp TEEEEEETTSEEEEEESCC--CC--EEEE--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred cceEEeccCCcEEEEECCCCcEE--EEEc--CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 68999999999999999988643 3333 788999999999998 5899999999999999874
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-43 Score=276.30 Aligned_cols=240 Identities=22% Similarity=0.313 Sum_probs=207.4
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc------cccceecccCcceEEEEeCCCCCceEEEeeCCCcEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE------KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVR 79 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 79 (294)
.|...|.+++|+ |+|. ++++|+.|+.+++|++... .....+.+|...|.+++|+| ++..|++++.|++|+
T Consensus 104 ~~~~~v~~~~~s--p~g~-~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~ 179 (354)
T 2pbi_B 104 MPCTWVMACAYA--PSGC-AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCA 179 (354)
T ss_dssp CSSSCCCEEEEC--TTSS-EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred cCCCCEEEEEEC--CCCC-EEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEE
Confidence 567788999997 9998 9999999999999998643 34456778999999999999 888999999999999
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecC-CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
+||+++++.+..+. +|...|.+++|+|. ++.+|++|+.||.|++||+++ ....
T Consensus 180 lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-----------------------~~~~ 233 (354)
T 2pbi_B 180 LWDVESGQLLQSFH---GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-----------------------GQCV 233 (354)
T ss_dssp EEETTTCCEEEEEE---CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-----------------------CCEE
T ss_pred EEeCCCCeEEEEEc---CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-----------------------CcEE
Confidence 99999999999888 79999999999884 357999999999999999998 4456
Q ss_pred EEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec--CCCCeeEEEEcccCCcceEEEE
Q 022590 159 FIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV--PECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
..+..|...|.+++|+ +++|++++.|+.|++||++... .+..+.. +...+.+++|+|++ .+|++|
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~---------~~~~~~~~~~~~~~~~~~~s~~g--~~l~~g 302 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR---------EVAIYSKESIIFGASSVDFSLSG--RLLFAG 302 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCTTCCSCEEEEEECTTS--SEEEEE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------EEEEEcCCCcccceeEEEEeCCC--CEEEEE
Confidence 6778899999999997 8899999999999999998653 2333322 23468899999998 699999
Q ss_pred cCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 235 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
+.|+.|++||+.+++. ...+. +|...|++++|+|+|++|++|+.||.|++|+
T Consensus 303 ~~d~~i~vwd~~~~~~--~~~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 303 YNDYTINVWDVLKGSR--VSILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTSCEEEEETTTCSE--EEEEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCcEEEEECCCCce--EEEEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999988763 33333 7889999999999999999999999999996
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=273.87 Aligned_cols=252 Identities=22% Similarity=0.360 Sum_probs=200.8
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc--ccccee-cc-cCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE--KLHKSF-VG-HGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
.++.|.++|++++|+ |+ +|++|+.|+.|++||+.++ +....+ .+ |...|++++|+| ++++|++|+.|++|
T Consensus 9 ~~~~h~~~v~~~~~s--~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v 82 (330)
T 2hes_X 9 SLKLYKEKIWSFDFS--QG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTV 82 (330)
T ss_dssp EEECCSSCEEEEEEE--TT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eeccCCCceeeeccC--CC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcE
Confidence 356899999999997 55 7999999999999999875 344455 34 999999999999 88999999999999
Q ss_pred EEEEcCC-------CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 79 RLWNVQT-------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 79 ~vwd~~~-------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
++||+.. .+.+..+. +|...|.+++|+| ++.+|++|+.|++|++||++....
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~----------------- 141 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIE---GHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGE----------------- 141 (330)
T ss_dssp EEEEC-------CCCEEEEEEC-------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCC-----------------
T ss_pred EEEEcccCcCccccceeEEEEc---CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCC-----------------
Confidence 9999853 23444555 7999999999999 889999999999999999964210
Q ss_pred ceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcc
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (294)
....+..+..|...|.++.|+ +++|++++.|+.|++||.+.+. ...+..+..|...|.+++|+|++...
T Consensus 142 --~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 142 --EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD-------WECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp --CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred --CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC-------eeEEEEccCCCCcEEEEEecCCCCee
Confidence 012355678899999999997 7899999999999999987541 23567788899999999999995446
Q ss_pred eEEEEcCCCeEEEEeccCCCc------eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 230 AAAIGNREGKIFVWELQSSPP------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+|++|+.|+.|++||++.... .....+. ..|...|.+++|++++ +|++++.||.|++||..
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP-DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECC-SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecc-cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcC
Confidence 899999999999999976421 1112221 2378899999999765 89999999999999975
No 26
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-44 Score=280.10 Aligned_cols=255 Identities=17% Similarity=0.214 Sum_probs=217.3
Q ss_pred CcccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcC--CccccceecccCcceEEEEeCCCC--CceEEEeeCCCc
Q 022590 2 CYVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQPLK--PSLVVSASKDES 77 (294)
Q Consensus 2 ~~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~ 77 (294)
..++.|.++|++++|+ |+++ +|++|+.||.|++||+. +++.+..+.+|..+|++++|++ + +.+|++|+.||.
T Consensus 5 ~~~~~h~~~v~~~~~s--~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 5 VIANAHNELIHDAVLD--YYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGK 80 (379)
T ss_dssp CCEEECCCCEEEEEEC--SSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSC
T ss_pred EEecCCcccEEEEEEc--CCCC-EEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCE
Confidence 3567999999999998 8998 99999999999999998 5677788999999999999997 5 899999999999
Q ss_pred EEEEEcCCCc--eEEEeeccCCCCCceeEEEEecCC--CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 78 VRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 78 i~vwd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
|++||+.+++ .+..+. .|...|.+++|+| + +.+|++++.|+.|++||++...
T Consensus 81 v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~-------------------- 136 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHA---VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENG-------------------- 136 (379)
T ss_dssp EEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTS--------------------
T ss_pred EEEEEcCCCceeEeeeec---CCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCC--------------------
Confidence 9999999886 555555 6999999999999 6 8899999999999999998732
Q ss_pred eeeceEEeecCCCceeeccee---------------cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee
Q 022590 154 VQFPVFIASVHSNYVDCNRWL---------------GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 218 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~~~~~---------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 218 (294)
......+..|...|.++.|+ ++++++++.|+.|++||++.... .......+..|...+.
T Consensus 137 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 137 -TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-----TYVLESTLEGHSDWVR 210 (379)
T ss_dssp -CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT-----EEEEEEEECCCSSCEE
T ss_pred -ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc-----ceeeEEEEecccCcEe
Confidence 12334567789999999996 47899999999999999987643 2335567778889999
Q ss_pred EEEEccc---CCcceEEEEcCCCeEEEEeccCCCceee-eeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 219 FIKFSCD---FHYNAAAIGNREGKIFVWELQSSPPVLI-ARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 219 ~~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+++|+|+ + .+|++++.||.|++||++..+.... .......|...|.+++|+|++++|++++.||.|++|+++
T Consensus 211 ~~~~sp~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 211 DVAWSPTVLLR--SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEECCCCSSS--EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EEEECCCCCCC--CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 9999999 6 6999999999999999998753322 223334577899999999999999999999999999986
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.3e-43 Score=272.49 Aligned_cols=247 Identities=21% Similarity=0.402 Sum_probs=202.4
Q ss_pred cccccCceeEEEEEee---cC-CCceEEEEeecCCeEEEEEcCCc-------cccceecccCcceEEEEeCCCCCceEEE
Q 022590 3 YVDQKEESFYTVSWAC---NV-DGIPFLVAGGINGIIRVIDVSNE-------KLHKSFVGHGDSINEIRTQPLKPSLVVS 71 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~---~~-~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s 71 (294)
.++.|.+.|++++|.+ ++ +++ +|++|+.|++|++||+.+. .+...+.+|...|++++|+| ++.++++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEE
Confidence 4668999999999943 24 777 9999999999999998753 34567889999999999999 8899999
Q ss_pred eeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 72 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 72 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
|+.|++|++||+++++.+..+. +|...|.+++|+| ++.+|++++.|+.|++||+.....
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~---~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~----------------- 152 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFV---GHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECK----------------- 152 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEE---CCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEE-----------------
T ss_pred EcCCCcEEEEECCCCcEEEEEc---CCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCce-----------------
Confidence 9999999999999999998888 7999999999999 888999999999999999974110
Q ss_pred ceeeeceEEeecCCCceeecceec------------ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeE
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWLG------------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 219 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~~------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 219 (294)
........|...|.++.|++ .+|++++.|+.|++||.+. .....+..|...|.+
T Consensus 153 ----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----------~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 153 ----FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----------QIRYTFKAHESNVNH 218 (343)
T ss_dssp ----EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----------EEEEEEECCSSCEEE
T ss_pred ----eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----------ceeEEEcCccccceE
Confidence 01111235778888888862 5899999999999999432 255677888999999
Q ss_pred EEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 220 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 220 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++|+|++ .+|++|+.||.|++||+....... ..+ .+...|.+++|+|++++|+++ .|+.|++||+.+
T Consensus 219 ~~~s~~g--~~l~sgs~dg~v~iwd~~~~~~~~-~~~---~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~ 285 (343)
T 2xzm_R 219 LSISPNG--KYIATGGKDKKLLIWDILNLTYPQ-REF---DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT 285 (343)
T ss_dssp EEECTTS--SEEEEEETTCEEEEEESSCCSSCS-EEE---ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSS
T ss_pred EEECCCC--CEEEEEcCCCeEEEEECCCCcccc-eee---cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC
Confidence 9999999 689999999999999995543211 222 233569999999999887755 677899999864
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.4e-44 Score=278.19 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=195.3
Q ss_pred ccCceeEEEEEeecCCCceEEEEeec------CCeEEEEEcCCccccc----eecccCcceEEEEeCCCCCceEEEeeCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGI------NGIIRVIDVSNEKLHK----SFVGHGDSINEIRTQPLKPSLVVSASKD 75 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~d 75 (294)
.|++.|++++|+ |||+ +||+|+. |+.|++|+..++.... ...+|...|++++|+| ++. +++++.|
T Consensus 40 ~H~~~V~~v~fS--pDG~-~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~-d~~-~l~~s~d 114 (357)
T 4g56_B 40 CMEVQIGAVRYR--RDGA-LLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS-EKG-ILVASDS 114 (357)
T ss_dssp CCCSEEEEEEEC--SSSC-EEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET-TTE-EEEEETT
T ss_pred cccCCEEEEEEC--CCCC-EEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC-CCC-EEEEECC
Confidence 589999999998 9999 9999997 7889999987765433 3356889999999999 654 5677889
Q ss_pred CcEEEEEcCCCceEEEee-ccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCcee
Q 022590 76 ESVRLWNVQTGICILIFA-GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 76 g~i~vwd~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
|+|++||+.+++...... ...+|...|++++|+| ++.+|++|+.|+.|++||+++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~----------------------- 170 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQ----------------------- 170 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTT-----------------------
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCC-----------------------
Confidence 999999998876543221 1226999999999999 889999999999999999998
Q ss_pred eeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceE
Q 022590 155 QFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 231 (294)
Q Consensus 155 ~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 231 (294)
......+..|...|.+++|+ ..++++++.|+.|++||+++++... ......+...+.+++|+|++. .+|
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-------~~~~~~~~~~v~~v~~sp~~~-~~l 242 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-------RIDFCASDTIPTSVTWHPEKD-DTF 242 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-------BCCCTTCCSCEEEEEECTTST-TEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-------eeeeccccccccchhhhhccc-ceE
Confidence 45567778899999999996 3478999999999999999875311 112234556789999999865 689
Q ss_pred EEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC-CEEEEeccCCcEEEEecCC
Q 022590 232 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 232 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~vw~~~~ 293 (294)
++|+.|+.|++||+++.+.. ..+. .|...|++++|+|++ ++|++|+.||.|+|||+++
T Consensus 243 a~g~~d~~i~~wd~~~~~~~--~~~~--~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPDSA--QTSA--VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp EEEESSSCEEEEESSCGGGC--EEEC--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred EEeecccceeEEECCCCcEe--EEEe--ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 99999999999999987643 3333 777899999999987 6899999999999999875
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-43 Score=292.73 Aligned_cols=248 Identities=20% Similarity=0.274 Sum_probs=206.6
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCCCCceEEEeeCC----C
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKD----E 76 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g 76 (294)
.+.+|.+.|++++|+ |+|+ +||+|+.||+|+|||+.+++ ....+.+|.++|.+++|+| ++++|++++.+ +
T Consensus 54 ~~~~h~~~v~~~~~s--pdg~-~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTS--PSGY-YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFG 129 (611)
T ss_dssp EECCCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSE
T ss_pred EecCCCCceEEEEEC--CCCc-EEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCcee
Confidence 356899999999998 9999 99999999999999987543 3457788999999999999 88889888765 4
Q ss_pred cEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 77 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 77 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
+|++|| .++....+. +|...|++++|+|++...|++|+.|++|++||... ..
T Consensus 130 ~v~~wd--~~~~~~~l~---gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----------------------~~ 181 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLT---GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----------------------FK 181 (611)
T ss_dssp EEEETT--TCCBCBCCC---CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----------------------BE
T ss_pred EEEEee--CCCCcceec---CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----------------------Ce
Confidence 678887 455555555 79999999999994445799999999999999876 33
Q ss_pred ceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee-------cCCCCeeEEEEcccCC
Q 022590 157 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP-------VPECDIWFIKFSCDFH 227 (294)
Q Consensus 157 ~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~ 227 (294)
....+.+|...|.+++|+ +++|++++.|+.|++||+.+++ ....+. .|...|.+++|+|++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~---------~~~~~~~~~~~~~~h~~~V~~v~~spdg- 251 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT---------KTGVFEDDSLKNVAHSGSVFGLTWSPDG- 251 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---------EEEECBCTTSSSCSSSSCEEEEEECTTS-
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc---------EeeeeccccccccccCCCEEEEEECCCC-
Confidence 456678899999999997 7899999999999999998765 233332 678899999999998
Q ss_pred cceEEEEcCCCeEEEEeccCCCceeeee---------------------------------------ccccccCCCeEEE
Q 022590 228 YNAAAIGNREGKIFVWELQSSPPVLIAR---------------------------------------LSHAQSKSPIRQT 268 (294)
Q Consensus 228 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------------------------------~~~~~~~~~v~~~ 268 (294)
.+|++++.|+.|++||+++++...... ....+|...|+++
T Consensus 252 -~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 252 -TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp -SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred -CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 689999999999999998765322111 0123688899999
Q ss_pred EEccCCCEEEEeccCCcEEEEecCC
Q 022590 269 AMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 269 ~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+|+|+|++|++++.||.|++||+.+
T Consensus 331 ~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 331 SSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEeCCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999999999864
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-42 Score=268.60 Aligned_cols=250 Identities=20% Similarity=0.337 Sum_probs=210.0
Q ss_pred cccccCceeEEEEEeecCC-CceEEEEeecCCeEEEEEcCCcc-----ccceecccCcceEEEEeCCCCCceEEEeeCCC
Q 022590 3 YVDQKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEK-----LHKSFVGHGDSINEIRTQPLKPSLVVSASKDE 76 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 76 (294)
.|++|.+.|++|+|+ |+ ++ +|++|+.||+|+|||+.+.+ +...+.+|...|++++|+| ++++|++++.|+
T Consensus 33 tL~GH~~~V~~v~~s--p~~~~-~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~ 108 (340)
T 4aow_A 33 TLKGHNGWVTQIATT--PQFPD-MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDG 108 (340)
T ss_dssp EECCCSSCEEEEEEC--TTCTT-EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred EECCccCCEEEEEEe--CCCCC-EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccc
Confidence 367899999999998 76 45 99999999999999987654 4567789999999999999 899999999999
Q ss_pred cEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 77 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 77 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
.|++|+........... .+...+..+.+++ .+.+|++++.|+.+++||+... ..
T Consensus 109 ~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~----------------------~~ 162 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFV---GHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGV----------------------CK 162 (340)
T ss_dssp EEEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSC----------------------EE
T ss_pred cceEEeecccceeeeec---CCCCceeEEEEee-cCccceeecCCCeEEEEEeCCC----------------------ce
Confidence 99999999888887777 5888899999999 8888999999999999998763 22
Q ss_pred ceEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEE
Q 022590 157 PVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 157 ~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
.......|...+..+.|+ ..++++++.|+.|++||+++.+ ....+..|...|.+++|+|++ .+|+
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~---------~~~~~~~h~~~v~~~~~s~~~--~~l~ 231 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK---------LKTNHIGHTGYLNTVTVSPDG--SLCA 231 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEEEEEECTTS--SEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc---------eeeEecCCCCcEEEEEECCCC--CEEE
Confidence 344556788889988885 4578899999999999998654 677778889999999999998 6899
Q ss_pred EEcCCCeEEEEeccCCCceeee--------------------------------------ec-------cccccCCCeEE
Q 022590 233 IGNREGKIFVWELQSSPPVLIA--------------------------------------RL-------SHAQSKSPIRQ 267 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~--------------------------------------~~-------~~~~~~~~v~~ 267 (294)
+|+.||.|++||+++.+..... .+ ....|...|++
T Consensus 232 s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTS 311 (340)
T ss_dssp EEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEE
T ss_pred EEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEE
Confidence 9999999999998765321110 00 01246678999
Q ss_pred EEEccCCCEEEEeccCCcEEEEecCC
Q 022590 268 TAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 268 ~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++|+|+|++|++|+.||.|+|||+++
T Consensus 312 l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 99999999999999999999999875
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.6e-43 Score=291.22 Aligned_cols=273 Identities=15% Similarity=0.171 Sum_probs=209.4
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec-------ccCcceEEEEeCCCCCceEEEeeCCC
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV-------GHGDSINEIRTQPLKPSLVVSASKDE 76 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~l~s~~~dg 76 (294)
+..|.+.|++++|+ |+|+ +|++|+.|++|++||+.+++....+. +|.+.|.+++|+| ++++|++++.|+
T Consensus 186 l~~H~~~V~~v~fs--pdg~-~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~ 261 (611)
T 1nr0_A 186 FGEHTKFVHSVRYN--PDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADK 261 (611)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTS
T ss_pred eccccCceEEEEEC--CCCC-EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCC
Confidence 45899999999998 9998 99999999999999999998877774 7999999999999 899999999999
Q ss_pred cEEEEEcCCCceEEEee----------------------------------------ccCCCCCceeEEEEecCCCceEE
Q 022590 77 SVRLWNVQTGICILIFA----------------------------------------GAGGHRNEVLSVDFHPSDIYRIA 116 (294)
Q Consensus 77 ~i~vwd~~~~~~~~~~~----------------------------------------~~~~~~~~v~~l~~~~~~~~~l~ 116 (294)
+|++||+.+++.+..+. ...+|...|++++|+| ++.+|+
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~ 340 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLF 340 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEE
Confidence 99999999877655432 1237999999999999 999999
Q ss_pred eeecCCcEEEEecccccccccc---------ceeecC------------------CCCCCCC----------cee-----
Q 022590 117 SCGMDNTVKIWSMKEFWTYVEK---------SFTWTD------------------LPSKFPT----------KYV----- 154 (294)
Q Consensus 117 ~~~~dg~i~~wd~~~~~~~~~~---------~~~~~~------------------~~~~~~~----------~~~----- 154 (294)
+++.|++|++||+.+....... .+.+.. ....... ...
T Consensus 341 s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s 420 (611)
T 1nr0_A 341 SADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVS 420 (611)
T ss_dssp EEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEEC
T ss_pred EEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEe
Confidence 9999999999999864322110 000000 0000000 000
Q ss_pred ------------------eeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCC
Q 022590 155 ------------------QFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 214 (294)
Q Consensus 155 ------------------~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
...... ..|...+.+++|+ +++|++|+.|+.|++||+.... ...... ..|.
T Consensus 421 ~dg~~~~~~~~~~v~~~~~~~~~~-~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~-------~~~~~~-~~h~ 491 (611)
T 1nr0_A 421 ADGDIAVAACYKHIAIYSHGKLTE-VPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS-------VSEVKT-IVHP 491 (611)
T ss_dssp TTSSCEEEEESSEEEEEETTEEEE-EECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE-------EEEEEE-EECS
T ss_pred CCCcEEEEEeCceEEEEeCCceee-eecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc-------eeeeec-cCCC
Confidence 000111 1255678888887 8899999999999999997542 112233 5678
Q ss_pred CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
..|.+++|+|++ .+|++++.|+.|++|++.+... .........|...|.+++|+|+|++|++|+.|+.|++||++.
T Consensus 492 ~~v~~v~fspdg--~~las~s~d~~v~~w~~~~~~~-~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 492 AEITSVAFSNNG--AFLVATDQSRKVIPYSVANNFE-LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp SCEEEEEECTTS--SEEEEEETTSCEEEEEGGGTTE-ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CceEEEEECCCC--CEEEEEcCCCCEEEEEcCCCCc-eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 899999999999 6999999999999999987321 111111224889999999999999999999999999999864
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-42 Score=273.95 Aligned_cols=244 Identities=19% Similarity=0.371 Sum_probs=199.6
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCc------------------ceEEEEeCCCCCc
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD------------------SINEIRTQPLKPS 67 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~ 67 (294)
+|.+.|++++|+ |+|+ +||+|+ ++.+++|++.+++.+..+..|.. .|++++|+| +++
T Consensus 62 ~h~~~V~~v~fs--pdg~-~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFS--NDGE-YLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGK 136 (393)
T ss_dssp ECSSCCCEEEEC--TTSS-EEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSS
T ss_pred CCCCEEEEEEEC--CCCC-EEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCC
Confidence 599999999998 9999 899876 67999999999988877765532 499999999 899
Q ss_pred eEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCC
Q 022590 68 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 68 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
+|++|+.|++|++||+.+++.+..+. +|...|.+++|+| ++.+|++++.|++|++||+++..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~-------------- 198 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQ---GHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQ-------------- 198 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE--------------
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEc---cCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCe--------------
Confidence 99999999999999999999888887 7999999999999 88899999999999999998732
Q ss_pred CCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-------ecCCCCe
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-------PVPECDI 217 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~~~i 217 (294)
....+ .+...+.+++|+ +++|++++.|+.|++||++++. .+..+ ..|...|
T Consensus 199 ---------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~---------~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 199 ---------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF---------LVERLDSENESGTGHKDSV 259 (393)
T ss_dssp ---------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCC---------EEEEEC------CCCSSCE
T ss_pred ---------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCc---------EEEeecccccCCCCCCCCE
Confidence 12222 255668888875 6799999999999999998765 22222 4677889
Q ss_pred eEEEEcccCCcceEEEEcCCCeEEEEeccCCCcee--------eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEE
Q 022590 218 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL--------IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289 (294)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 289 (294)
.+++|+|++ .+|++|+.||.|++||+++..... .......+|...|.+++|+|++++|++|+.||.|++|
T Consensus 260 ~~v~~~~~g--~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 260 YSVVFTRDG--QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 337 (393)
T ss_dssp EEEEECTTS--SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred EEEEECCCC--CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 999999998 689999999999999998643211 0111223788899999999999999999999999999
Q ss_pred ecCC
Q 022590 290 DAIP 293 (294)
Q Consensus 290 ~~~~ 293 (294)
|+++
T Consensus 338 d~~~ 341 (393)
T 1erj_A 338 DKKS 341 (393)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9864
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-41 Score=261.04 Aligned_cols=244 Identities=25% Similarity=0.443 Sum_probs=206.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|...|.+++|+ |+++ +|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++|+.|++|++||+
T Consensus 61 ~~~h~~~v~~~~~~--~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~ 136 (312)
T 4ery_A 61 ISGHKLGISDVAWS--SDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 136 (312)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEET
T ss_pred hccCCCceEEEEEc--CCCC-EEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEC
Confidence 45789999999998 8998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE-ee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI-AS 162 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 162 (294)
++++.+..+. .|..+|.+++|+| ++.+|++++.||.|++||+++.. .... ..
T Consensus 137 ~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~-----------------------~~~~~~~ 189 (312)
T 4ery_A 137 KTGKCLKTLP---AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQ-----------------------CLKTLID 189 (312)
T ss_dssp TTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC-----------------------EEEEECC
T ss_pred CCCEEEEEec---CCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCc-----------------------eeeEEec
Confidence 9999888887 6999999999999 88999999999999999998732 2222 23
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee--EEEEcccCCcceEEEEcCCC
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW--FIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~l~~~~~dg 238 (294)
.+...+..++|+ +++|++++.|+.|++||+++++ .+..+..+..... ...+++.+. .++++|+.||
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg 259 (312)
T 4ery_A 190 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK---------CLKTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDN 259 (312)
T ss_dssp SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE---------EEEEECSSCCSSSCCCEEEECSSS-CEEEECCTTS
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------EEEEEEecCCceEEEEEEEEeCCC-cEEEEECCCC
Confidence 456678888886 7899999999999999998664 4555555544322 233443332 6899999999
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec--cCCcEEEEecC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC--EDGAIWRWDAI 292 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~vw~~~ 292 (294)
.|++||+++.+ ....+. +|...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 260 ~i~vwd~~~~~--~~~~~~--~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 260 LVYIWNLQTKE--IVQKLQ--GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEETTTCC--EEEEEC--CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEECCCch--hhhhhh--ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999876 334444 7889999999999999999986 69999999964
No 34
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-42 Score=268.40 Aligned_cols=265 Identities=18% Similarity=0.292 Sum_probs=211.9
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc----cccceecccCcceEEEEeCCC-CCceEEEeeCCCc
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVGHGDSINEIRTQPL-KPSLVVSASKDES 77 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~ 77 (294)
++..|.+.|++++|+ |+++ +|++|+.||.|++||+.++ +....+.+|..+|++++|+|. ++.+|++|+.||+
T Consensus 6 ~~~gH~~~v~~~~~~--~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYD--FYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEEC--SSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEc--CCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 456899999999998 8998 9999999999999999876 456677899999999999994 3789999999999
Q ss_pred EEEEEcCCC---------ceEEEeeccCCCCCceeEEEEecCC--CceEEeeecCCcEEEEeccccccccccceeecCCC
Q 022590 78 VRLWNVQTG---------ICILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLP 146 (294)
Q Consensus 78 i~vwd~~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 146 (294)
|++||+.++ +.+..+. +|...|.+++|+| + +.+|++++.||.|++||+++............
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--- 155 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLN---DSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE--- 155 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE---
T ss_pred EEEEecCCCcccccccCcceeeeec---ccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhcccccccc---
Confidence 999999877 3455555 6999999999999 7 88999999999999999987543222111100
Q ss_pred CCCCCceeeeceEEeecCCCceeeccee-----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 147 SKFPTKYVQFPVFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
..........|...+.++.|+ ++.+++++.++.+.+|+...+. ...+..+..|...|.+++
T Consensus 156 -------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 156 -------MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-------LHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp -------EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-------EEEEEECCCCCSCEEEEE
T ss_pred -------ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-------eeeeeecCCCCcceeEEE
Confidence 000111223577788888885 6799999999999888876553 234667778889999999
Q ss_pred EcccCCc--ceEEEEcCCCeEEEEeccCCCc--------------------------------------------eeeee
Q 022590 222 FSCDFHY--NAAAIGNREGKIFVWELQSSPP--------------------------------------------VLIAR 255 (294)
Q Consensus 222 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~--------------------------------------------~~~~~ 255 (294)
|+|++.. .+|++++.||.|++||++.... .....
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 9999732 5899999999999999987421 12222
Q ss_pred ccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 256 LSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 256 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
..+|...|++++|+|++++|++|+.||.|++||+.+
T Consensus 302 --~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 302 --HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp --ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred --EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 337889999999999999999999999999999875
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-41 Score=264.68 Aligned_cols=259 Identities=19% Similarity=0.240 Sum_probs=218.7
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.++|++++|+ |+++ +|++|+.||.|++||+.+++.+..+.+|...|++++|+| ++++|++++.||.|++||+
T Consensus 28 l~~h~~~v~~~~~s--~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 28 LTGHERPLTQVKYN--KEGD-LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EECCSSCEEEEEEC--TTSC-EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred EEEeeceEEEEEEc--CCCC-EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 56899999999998 8998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-----CcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
.+++.+..+. +...|.+++|+| ++.++++++.+ +.|++||++.......... ....+.
T Consensus 104 ~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------------~~~~~~ 166 (369)
T 3zwl_B 104 SNGQCVATWK----SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------------VSEEPI 166 (369)
T ss_dssp TTCCEEEEEE----CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE------------ECSSCS
T ss_pred CCCcEEEEee----cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecc------------ccccee
Confidence 9999998887 888999999999 88899999998 9999999987432211110 012234
Q ss_pred EEeecCCC--ceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 159 FIASVHSN--YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 159 ~~~~~~~~--~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
.....|.. .+.+++|+ ++++++++.||.|++||+++.. ..+..+..+...+.+++|+|++ .+|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~~~v~~~~~~~~~--~~l~~~ 236 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY--------EYVDSIDLHEKSISDMQFSPDL--TYFITS 236 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT--------EEEEEEECCSSCEEEEEECTTS--SEEEEE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc--------EeEEEEecCCCceeEEEECCCC--CEEEEe
Confidence 45556666 89999997 7899999999999999998632 3677788888999999999998 689999
Q ss_pred cCCCeEEEEeccCCCceeeeec---------------------------------------------------cccccCC
Q 022590 235 NREGKIFVWELQSSPPVLIARL---------------------------------------------------SHAQSKS 263 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~~~~~~---------------------------------------------------~~~~~~~ 263 (294)
+.||.|++||+++.+....... ....|..
T Consensus 237 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 316 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG 316 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS
T ss_pred cCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC
Confidence 9999999999987653322110 0124778
Q ss_pred CeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 264 PIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 264 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++++|+|++++|++++.||.|++|+++.
T Consensus 317 ~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 999999999999999999999999999863
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-41 Score=279.47 Aligned_cols=236 Identities=27% Similarity=0.431 Sum_probs=208.6
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|..+|.+++|+ |+|+ +|++|+.||.|++|+. +++.+..+.+|...|++++|+| ++++|++++.|+.|++||.
T Consensus 340 ~~~~~~~v~~~~~s--~~g~-~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 340 LTGHSSSVWGVAFS--PDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT
T ss_pred EeCCCCCEEEEEEC--CCCC-EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC
Confidence 34788999999997 9998 9999999999999995 6778888999999999999999 8999999999999999996
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
+++.+..+. +|...|++++|+| ++.+|++++.|+.|++||... .....+..
T Consensus 415 -~~~~~~~~~---~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~------------------------~~~~~~~~ 465 (577)
T 2ymu_A 415 -NGQLLQTLT---GHSSSVWGVAFSP-DDQTIASASDDKTVKLWNRNG------------------------QLLQTLTG 465 (577)
T ss_dssp -TCCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTS------------------------CEEEEEEC
T ss_pred -CCCEEEEec---CCCCCeEEEEECC-CCCEEEEEcCCCEEEEEECCC------------------------CEEEEEcC
Confidence 677777777 6999999999999 889999999999999999753 23556778
Q ss_pred CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 164 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
|...|.+++|+ +++|++++.|+.|++||.. ++ .+..+..|...|++++|+|++ .+|++++.||.|+
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~---------~~~~~~~h~~~v~~l~~s~dg--~~l~s~~~dg~v~ 533 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---------LLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVK 533 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC---------EEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC---------EEEEEeCCCCCEEEEEEcCCC--CEEEEEECcCEEE
Confidence 99999999997 7899999999999999953 22 677888999999999999999 5899999999999
Q ss_pred EEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 242 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
+||.. ++ ....+. +|..+|++++|+|||++|+|++.||.|++||
T Consensus 534 lwd~~-~~--~~~~~~--~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 534 LWNRN-GQ--LLQTLT--GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EECTT-SC--EEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEeCC-CC--EEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99964 33 334444 7889999999999999999999999999997
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.2e-42 Score=275.85 Aligned_cols=251 Identities=16% Similarity=0.152 Sum_probs=197.0
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.|+..|+||+|+ |.+..+||+|+.||.|+|||+.+++.. ..+.+|.+.|++|+|+|.++.+|++|+.||+|++||+
T Consensus 117 ~~~~~V~~l~~~--P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 117 PFDRRATSLAWH--PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp ECSSCEEEEEEC--SSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCCCCEEEEEEe--CCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 678899999998 643338999999999999999877544 3456899999999999977889999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
+++.. ..+.....+...+.+++|+| ++.+|++|+.||.|++||++.. .+..+..
T Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~------------------------~~~~~~~ 248 (435)
T 4e54_B 195 KGNIL-RVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGK------------------------ELWNLRM 248 (435)
T ss_dssp TSCEE-EEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSC------------------------BCCCSBC
T ss_pred cCCce-eEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcc------------------------eeEEEec
Confidence 76543 34443334556789999999 8899999999999999998751 2345678
Q ss_pred CCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 164 HSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 164 ~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
|...|.+++|+ ..++++++.|+.|++||+++.+.. ..+.....|...|.+++|+|++ .+|++++.||.|
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~------~~~~~~~~h~~~v~~~~~spdg--~~l~s~~~D~~i 320 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK------ASFLYSLPHRHPVNAACFSPDG--ARLLTTDQKSEI 320 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS------SCCSBCCBCSSCEEECCBCTTS--SEEEEEESSSCE
T ss_pred ccceEEeeeecCCCceEEEEecCcceeeEEeccccccc------ceEEEeeeccccccceeECCCC--CeeEEEcCCCEE
Confidence 99999999997 347889999999999999876532 1233345678889999999998 689999999999
Q ss_pred EEEeccCCCceee-----------------------------------------------eecc----------ccccCC
Q 022590 241 FVWELQSSPPVLI-----------------------------------------------ARLS----------HAQSKS 263 (294)
Q Consensus 241 ~i~d~~~~~~~~~-----------------------------------------------~~~~----------~~~~~~ 263 (294)
++||+.+.+.... ..+. ..+|..
T Consensus 321 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~ 400 (435)
T 4e54_B 321 RVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS 400 (435)
T ss_dssp EEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCC
T ss_pred EEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCC
Confidence 9999876431100 0000 113455
Q ss_pred CeEEE-EEccCCCEEEEeccCCcEEEEecCC
Q 022590 264 PIRQT-AMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 264 ~v~~~-~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|.++ +|+|+|++|++|+ |+.|+||++++
T Consensus 401 ~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 401 GISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp CCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred cEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 67776 6999999999886 78999999875
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-40 Score=264.46 Aligned_cols=241 Identities=20% Similarity=0.384 Sum_probs=208.1
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC-
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ- 84 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~- 84 (294)
.|.+.|.+++|+ |+++ +|++|+.||.|++||+.+++.+..+.+|...|.+++|++ ++|++|+.||.|++||++
T Consensus 132 ~~~~~v~~v~~s--~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 132 DESTYVASVKWS--HDGS-FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CTTCCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS
T ss_pred CCCCCEEEEEEC--CCCC-EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEeccc
Confidence 478999999998 8998 999999999999999999999999999999999999954 699999999999999998
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
.+..+..+. +|...|.+++|+| ++.+|++|+.||.|++||+++ ..+...+..|
T Consensus 206 ~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~-----------------------~~~~~~~~~~ 258 (401)
T 4aez_A 206 ANHQIGTLQ---GHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARS-----------------------SIPKFTKTNH 258 (401)
T ss_dssp SSCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTC-----------------------SSEEEEECCC
T ss_pred CcceeeEEc---CCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCC-----------------------CCccEEecCC
Confidence 455666666 6999999999999 889999999999999999997 4456667789
Q ss_pred CCceeeccee---cceEEEee--CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE--EcCC
Q 022590 165 SNYVDCNRWL---GDFILSKS--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--GNRE 237 (294)
Q Consensus 165 ~~~i~~~~~~---~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~d 237 (294)
...|.+++|+ ..++++++ .|+.|++||+++++ .+..+. +...+.+++|+|++. ++++ |+.|
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~---------~~~~~~-~~~~v~~~~~s~~~~--~l~~~~g~~d 326 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA---------RVNTVD-AGSQVTSLIWSPHSK--EIMSTHGFPD 326 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC---------EEEEEE-CSSCEEEEEECSSSS--EEEEEECTTT
T ss_pred cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC---------EEEEEe-CCCcEEEEEECCCCC--eEEEEeecCC
Confidence 9999999997 35666655 79999999998765 444444 456799999999994 6766 6689
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|.|++||+.+.+......+. +|...|.+++|+|++++|++++.||.|++|++.+
T Consensus 327 g~i~v~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIP--AHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEE--CCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CcEEEEecCCccceeEEEec--CCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 99999999987644444444 7889999999999999999999999999999864
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-42 Score=272.49 Aligned_cols=255 Identities=11% Similarity=0.113 Sum_probs=200.6
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc--cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE--KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.+.++|++++|+ |+|+ +|++|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.|++|++||+
T Consensus 9 ~~~~~v~~~~~s--~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 9 ILPKPSYEHAFN--SQRT-EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp ECSSCCSCCEEC--SSSS-EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC--
T ss_pred cCCCcEEEEEEC--CCCC-EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEc
Confidence 467899999998 8998 9999999999999999988 78889999999999999999 8899999999999999999
Q ss_pred CCCc---eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 84 QTGI---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 84 ~~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
.+++ ....+. +|...|.+++|+| ++.+|++++.|+.|++||++.... ......
T Consensus 85 ~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~--------------------~~~~~~ 140 (377)
T 3dwl_C 85 RPDGTWKQTLVLL---RLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQEND--------------------WWVSKH 140 (377)
T ss_dssp ----CCCCEEECC---CCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-------------------------CCCCEE
T ss_pred CCCCceeeeeEec---ccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCccc--------------------ceeeeE
Confidence 9877 444444 6999999999999 888999999999999999987321 012334
Q ss_pred eec-CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCC---------CCceeeeeeecCCCCeeEEEEcccCCc
Q 022590 161 ASV-HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE---------GTADILQKYPVPECDIWFIKFSCDFHY 228 (294)
Q Consensus 161 ~~~-~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 228 (294)
+.. |...|.+++|+ +++|++++.|+.|++||++........ .....+..+ .|...+.+++|+|++
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-- 217 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-- 217 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS--
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC--
Confidence 455 89999999997 779999999999999999754321110 112344555 788899999999998
Q ss_pred ceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 229 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 229 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.+|++++.||.|++||+++.+...........|..+|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 5899999999999999999875222122233788899999999999999999877655 67654
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.7e-41 Score=284.44 Aligned_cols=246 Identities=20% Similarity=0.346 Sum_probs=206.9
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc-----ccceecccCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK-----LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
++.|.+.|++++|+ |++..+|++|+.||+|++|++.+.. ....+.+|...|++++|+| ++++|++|+.||+|
T Consensus 378 l~~H~~~V~~v~~~--~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 378 MRAHTDMVTAIATP--IDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGEL 454 (694)
T ss_dssp EECCSSCEEEEECC--TTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred cccCCceeEEEEec--CCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcE
Confidence 56899999999997 6553499999999999999997643 3457889999999999999 89999999999999
Q ss_pred EEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
++||+.+++....+. +|...|.+++|+| ++.+|++|+.|++|++||+..... ....
T Consensus 455 ~vwd~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~--------------------~~~~ 510 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFV---GHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECK--------------------YTIS 510 (694)
T ss_dssp EEEETTTTEEEEEEE---CCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEE--------------------EEEC
T ss_pred EEEECCCCcceeEEe---CCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcc--------------------eeec
Confidence 999999999988888 7999999999999 888999999999999999865210 0001
Q ss_pred EEeecCCCceeecceec----ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 159 FIASVHSNYVDCNRWLG----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
.....|...|.++.|+. ..+++++.|+.|++||+++.+ ....+..|...|.+++|+|++ .+|++|
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---------~~~~~~~h~~~v~~v~~spdg--~~l~sg 579 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---------LRSTLAGHTGYVSTVAVSPDG--SLCASG 579 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECTTS--SEEEEE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---------EEEEEcCCCCCEEEEEEeCCC--CEEEEE
Confidence 11246888999999972 479999999999999998654 567788899999999999998 699999
Q ss_pred cCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 235 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+.||.|++||+++++. ...+. +...|.+++|+|++.+|++++ |+.|++||+++
T Consensus 580 ~~Dg~i~iwd~~~~~~--~~~~~---~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~ 632 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGKK--LYSLE---ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLES 632 (694)
T ss_dssp ETTSBCEEEETTTTEE--EECCB---CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTT
T ss_pred eCCCeEEEEECCCCce--EEEec---CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCC
Confidence 9999999999998863 33332 346799999999998887775 55699999874
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-40 Score=261.77 Aligned_cols=253 Identities=15% Similarity=0.189 Sum_probs=205.6
Q ss_pred ccccCceeEEEEEeecCCC-ceEEEEeecCCeEEEEEcCCccccceec--ccCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 4 VDQKEESFYTVSWACNVDG-IPFLVAGGINGIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
+..|.+.|++++|+ |++ + +|++|+.||.|++||+.+++....+. +|...|.+++|+|.++.+|++++.|+.|++
T Consensus 69 ~~~h~~~v~~~~~~--~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 69 ASPFDRRVTSLEWH--PTHPT-TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp ECCCSSCEEEEEEC--SSCTT-EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred ccCCCCCEEEEEEC--CCCCC-EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 45799999999998 888 6 99999999999999999888776665 699999999999966789999999999999
Q ss_pred EEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 81 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
||+.. ..+..+....+|...|.+++|+| ++.+|++++.|+.|++||++. .+...
T Consensus 146 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~------------------------~~~~~ 199 (383)
T 3ei3_B 146 RDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLDG------------------------HEIFK 199 (383)
T ss_dssp EETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETTS------------------------CEEEE
T ss_pred EECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECCC------------------------CEEEE
Confidence 99985 55666664445668899999999 889999999999999999953 34566
Q ss_pred eecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcc-cCCcceEEEEcC
Q 022590 161 ASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC-DFHYNAAAIGNR 236 (294)
Q Consensus 161 ~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~~~~ 236 (294)
+..|...|.+++|+ ++ ++++++.|+.|++||+++.+. ....+..+ .+...+.+++|+| ++ .+|++++.
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~-~~~~~v~~~~~s~~~~--~~l~~~~~ 271 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD-----KNSYIAEM-PHEKPVNAAYFNPTDS--TKLLTTDQ 271 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS-----TTCEEEEE-ECSSCEEEEEECTTTS--CEEEEEES
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc-----ccceEEEe-cCCCceEEEEEcCCCC--CEEEEEcC
Confidence 77899999999998 45 899999999999999997542 12234444 5788999999999 88 58999999
Q ss_pred CCeEEEEeccCCCceee-------------------------------------------------------eecccccc
Q 022590 237 EGKIFVWELQSSPPVLI-------------------------------------------------------ARLSHAQS 261 (294)
Q Consensus 237 dg~i~i~d~~~~~~~~~-------------------------------------------------------~~~~~~~~ 261 (294)
|+.|++||+++.+.... ..+....+
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~ 351 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNA 351 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTB
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCC
Confidence 99999999865432111 11111124
Q ss_pred CCCeEEEEEccCCCEEEEeccCCcEEEEecCCC
Q 022590 262 KSPIRQTAMSYDGSTILSCCEDGAIWRWDAIPT 294 (294)
Q Consensus 262 ~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 294 (294)
...+..++|+|++++|++|+ ||.|++||++++
T Consensus 352 ~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~~ 383 (383)
T 3ei3_B 352 AGIISLNKFSPTGDVLASGM-GFNILIWNREDT 383 (383)
T ss_dssp CSCCCEEEECTTSSEEEEEE-TTEEEEEECC--
T ss_pred CceEEEEEEecCccEEEEec-CCcEEEEecCCC
Confidence 56677889999999999997 999999999864
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.3e-41 Score=284.07 Aligned_cols=249 Identities=26% Similarity=0.353 Sum_probs=204.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|...|.+++|+ |+|+ +|++|+.||.|+|||+.+++....+.+|...|.+++|+| ++++|++|+.|++|++||.
T Consensus 426 ~~~h~~~v~~v~~s--~~g~-~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 426 LTGHSHFVEDVVLS--SDGQ-FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EECCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECT
T ss_pred ecCCCCcEEEEEEC--CCCC-EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEC
Confidence 45799999999998 8998 999999999999999999999999999999999999999 8899999999999999998
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCC-CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
.............+|...|.+++|+|+. ...|++++.|+.|++||++. ......+.
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~-----------------------~~~~~~~~ 558 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-----------------------CKLRSTLA 558 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-----------------------CCEEEEEC
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC-----------------------CcEEEEEc
Confidence 6554444333344799999999999933 25799999999999999987 34456778
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
+|...|.+++|+ +++|++++.||.|++||+++++ .+..+.. ...+.+++|+|++ .+++++ .++.|
T Consensus 559 ~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~---------~~~~~~~-~~~v~~~~~sp~~--~~l~~~-~~~~i 625 (694)
T 3dm0_A 559 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK---------KLYSLEA-NSVIHALCFSPNR--YWLCAA-TEHGI 625 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE---------EEECCBC-SSCEEEEEECSSS--SEEEEE-ETTEE
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------eEEEecC-CCcEEEEEEcCCC--cEEEEE-cCCCE
Confidence 899999999997 7899999999999999998765 3333333 4579999999998 455555 56779
Q ss_pred EEEeccCCCceeeeeccc---------------cccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 241 FVWELQSSPPVLIARLSH---------------AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~---------------~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
++||+++.+......... ..+...+++++|+|+|++|++|+.||.|++|++.
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 999999876433222110 0111247899999999999999999999999985
No 43
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-41 Score=289.27 Aligned_cols=256 Identities=17% Similarity=0.211 Sum_probs=214.5
Q ss_pred CcccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcC--CccccceecccCcceEEEEeCCCC--CceEEEeeCCCc
Q 022590 2 CYVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQPLK--PSLVVSASKDES 77 (294)
Q Consensus 2 ~~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~ 77 (294)
..++.|.++|++++|+ |+|+ +|++|+.||.|++||+. +++....+.+|.++|++++|+| + +++|++|+.||+
T Consensus 3 ~~l~gH~~~V~~l~~s--~dg~-~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLD--YYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCC--SSSC-CEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSC
T ss_pred eecccCcceeEEEEEC--CCCC-eEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCe
Confidence 3567999999999998 8898 99999999999999998 5577788999999999999998 5 889999999999
Q ss_pred EEEEEcCCCc--eEEEeeccCCCCCceeEEEEecCC--CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 78 VRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 78 i~vwd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
|++||+.+++ .+..+. +|...|.+++|+| + +.++++|+.||.|++||++...
T Consensus 79 I~vwd~~~~~~~~~~~~~---~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~-------------------- 134 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHA---VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENG-------------------- 134 (753)
T ss_dssp EEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSS--------------------
T ss_pred EEEEECCCCccccccccc---CCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCC--------------------
Confidence 9999999886 455555 6999999999999 6 8899999999999999998732
Q ss_pred eeeceEEeecCCCceeeccee---------------cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee
Q 022590 154 VQFPVFIASVHSNYVDCNRWL---------------GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 218 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~~~~~---------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 218 (294)
.........|...|.++.|+ ++++++++.||.|++||++++.. .......+..|...|.
T Consensus 135 -~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~-----~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 135 -TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ-----TYVLESTLEGHSDWVR 208 (753)
T ss_dssp -CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT-----EEEEEEEECCCSSCEE
T ss_pred -CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc-----cceeeeeecCCCCcEE
Confidence 12234567788999999985 46899999999999999987642 2345667788899999
Q ss_pred EEEEccc---CCcceEEEEcCCCeEEEEeccCCCceeeee-ccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 219 FIKFSCD---FHYNAAAIGNREGKIFVWELQSSPPVLIAR-LSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 219 ~~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+++|+|+ + .++++++.||.|++||+++.+...... .....|...|++++|+|+|++|++|+.||.|++|++++
T Consensus 209 ~l~~sp~~~~~--~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 209 DVAWSPTVLLR--SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEECCCCSSS--EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEeccCCCCC--CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999999 6 699999999999999999874322222 22346778999999999999999999999999999874
No 44
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=262.19 Aligned_cols=258 Identities=15% Similarity=0.224 Sum_probs=211.5
Q ss_pred ccccCceeEEEEEeecC-CCceEEEEeecCCeEEEEEcCCccccceec-------------ccCcceEEEEeCCCCCceE
Q 022590 4 VDQKEESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFV-------------GHGDSINEIRTQPLKPSLV 69 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------~h~~~v~~~~~~~~~~~~l 69 (294)
+..|.++|++++|+ | +++ +|++|+.||.|++||+.+++....+. +|...|.+++|+|.++.+|
T Consensus 39 ~~~h~~~v~~~~~s--~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 39 ERIHGGGINTLDIE--PVEGR-YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp CCCCSSCEEEEEEC--TTTCC-EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeccCCcEEEEEEe--cCCCC-EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 45799999999998 8 888 99999999999999999887666553 5999999999999777899
Q ss_pred EEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCC--CceEEeeecCCcEEEEeccccccccccceeecCCCC
Q 022590 70 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 70 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
++++.||.|++||+.+++....+. +...+.++.|+|.. +.++++++.||.|++||++.
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---------------- 175 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS---------------- 175 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS----------------
T ss_pred EEEeCCCeEEEeeCCCCccceecc----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC----------------
Confidence 999999999999999999888887 78889999999842 34899999999999999987
Q ss_pred CCCCceeeeceEEeecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCC-------CCceeeeeeecCCCCe
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGE-------GTADILQKYPVPECDI 217 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~i 217 (294)
......+..|...|.+++|+ ++ ++++++.||.|++||++........ ...........+...+
T Consensus 176 -------~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 176 -------GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp -------SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred -------cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 34456677899999999997 44 5899999999999999876521100 0111112224677889
Q ss_pred eEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeee-------------------------------------------
Q 022590 218 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA------------------------------------------- 254 (294)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------------------------------- 254 (294)
.+++|+|++ .+|++++.||.|++||+.+++.....
T Consensus 249 ~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 249 NGLCFTSDG--LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp EEEEECTTS--SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred eEEEEcCCC--CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 999999998 68999999999999999876432110
Q ss_pred eccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 255 RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.....+|...|++++|+|++++|++++.||.|++||+++
T Consensus 327 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 327 ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 011236788999999999999999999999999999875
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-40 Score=261.86 Aligned_cols=258 Identities=12% Similarity=0.106 Sum_probs=214.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
+..|+++|++++|+ |+++ +|++++.||.|++||+.+++ .+..+.+|...|++++|+| ++++|++++.||.|++|
T Consensus 4 ~~~~~~~i~~~~~s--~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 4 HSFLVEPISCHAWN--KDRT-QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EESCSSCCCEEEEC--TTSS-EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred ecccCCCeEEEEEC--CCCC-EEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEE
Confidence 44689999999998 8998 99999999999999999887 8888999999999999999 88999999999999999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
|+.+++....+.. ..|...|.+++|+| ++.+|++++.|+.|++||++..... .......
T Consensus 80 d~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~-------------------~~~~~~~ 138 (372)
T 1k8k_C 80 TLKGRTWKPTLVI-LRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDW-------------------WVCKHIK 138 (372)
T ss_dssp EEETTEEEEEEEC-CCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTE-------------------EEEEEEC
T ss_pred ECCCCeeeeeEEe-ecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcc-------------------eeeeeee
Confidence 9988875554431 25889999999999 8899999999999999999873210 1112233
Q ss_pred ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCC---------CCCceeeeeeecCCCCeeEEEEcccCCcce
Q 022590 162 SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG---------EGTADILQKYPVPECDIWFIKFSCDFHYNA 230 (294)
Q Consensus 162 ~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 230 (294)
..|...|.+++|+ +++|++++.|+.|++||++....... ......+..+..+...+.+++|+|++ .+
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 216 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG--SR 216 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS--SE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC--CE
Confidence 5688999999997 77999999999999999864321110 11234667777888899999999998 58
Q ss_pred EEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 231 AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 231 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|++++.||.|++||+++.+.. ..+. .|..+|.+++|+|++++|++| .||.|++|++.+
T Consensus 217 l~~~~~d~~i~i~d~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADKKMAV--ATLA--SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTTEEEEEEGGGTTEE--EEEE--CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCcee--EEEc--cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999988743 3333 667899999999999988888 899999999864
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-41 Score=269.00 Aligned_cols=248 Identities=15% Similarity=0.255 Sum_probs=208.5
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC----ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
.|...|++++|+ |+++ +|++|+.||.|++|++.+ .+....+.+|...|++++|+|+++.+|++++.||.|++|
T Consensus 65 ~~~~~v~~~~~s--~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWS--HNNK-IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEEC--SSSS-CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred ecCCceEEEEEC--CCCC-eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 588999999997 8998 999999999999999987 457788899999999999999448999999999999999
Q ss_pred EcCCCc------eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 82 NVQTGI------CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 82 d~~~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
|+.+++ ....+....+|...|.+++|+|+++.+|++++.||.|++||++..
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----------------------- 198 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK----------------------- 198 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT-----------------------
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC-----------------------
Confidence 999886 443332333699999999999944889999999999999999983
Q ss_pred eceEEeecC------CCceeeccee--c-ceEEEeeCCC---eEEEecCCCCCCCCCCCCceeeeeee-cCCCCeeEEEE
Q 022590 156 FPVFIASVH------SNYVDCNRWL--G-DFILSKSVDN---EIVLWEPKMKEQSPGEGTADILQKYP-VPECDIWFIKF 222 (294)
Q Consensus 156 ~~~~~~~~~------~~~i~~~~~~--~-~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~ 222 (294)
.....+..+ ...|.+++|+ + .++++++.|+ .|++||+++... ....+. .|...+.+++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--------~~~~~~~~~~~~v~~~~~ 270 (416)
T 2pm9_A 199 KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--------PLQTLNQGHQKGILSLDW 270 (416)
T ss_dssp EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--------CSBCCCSCCSSCEEEEEE
T ss_pred CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--------CcEEeecCccCceeEEEe
Confidence 223333433 7889999997 3 5899999998 999999997632 344455 67889999999
Q ss_pred cc-cCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC-CEEEEeccCCcEEEEecCC
Q 022590 223 SC-DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 223 ~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~vw~~~~ 293 (294)
+| ++ .+|++++.||.|++||+++.+. ...+. .|...|.+++|+|++ .+|++++.||.|++||+..
T Consensus 271 s~~~~--~~l~s~~~dg~v~~wd~~~~~~--~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 271 CHQDE--HLLLSSGRDNTVLLWNPESAEQ--LSQFP--ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp CSSCS--SCEEEEESSSEEEEECSSSCCE--EEEEE--CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCCC--CeEEEEeCCCCEEEeeCCCCcc--ceeec--CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 99 66 6899999999999999998864 33333 677899999999999 8999999999999999864
No 47
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-40 Score=265.56 Aligned_cols=252 Identities=18% Similarity=0.291 Sum_probs=209.3
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC----------ccccceecccCcceEEEEeCCCCCc-eEEEeeC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----------EKLHKSFVGHGDSINEIRTQPLKPS-LVVSASK 74 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~ 74 (294)
.|.+.|++++|+ |++..+|++++.||.|++|++.+ .+....+.+|...|++++|+| ++. +|++|+.
T Consensus 126 ~h~~~v~~l~~~--p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~ 202 (430)
T 2xyi_A 126 NHEGEVNRARYM--PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLLSASD 202 (430)
T ss_dssp EESSCCSEEEEE--TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEEEECT
T ss_pred cCCCcEEEEEEC--CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEEEEeC
Confidence 789999999998 76433999999999999999986 577788899999999999999 555 9999999
Q ss_pred CCcEEEEEcCCCce-------EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCC
Q 022590 75 DESVRLWNVQTGIC-------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 75 dg~i~vwd~~~~~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
||+|++|++..+.. ...+. +|...|.+++|+|.++.+|++++.||.|++||++....
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~------------- 266 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFT---GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT------------- 266 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEEC---CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-------------
T ss_pred CCeEEEEeCCCCCCCCceeccceeec---CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-------------
Confidence 99999999987422 23333 69999999999997788999999999999999997310
Q ss_pred CCCCceeeeceEEeecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcc
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 224 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 224 (294)
..+...+..|...|.+++|+ +. ++++++.||.|++||++.... .+..+..|...+.+++|+|
T Consensus 267 -------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--------~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 267 -------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--------KLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp -------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--------CSEEEECCSSCEEEEEECS
T ss_pred -------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--------CeEEeecCCCCEEEEEECC
Confidence 13455567899999999997 44 689999999999999987432 4667778889999999999
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCcee----------eeeccccccCCCeEEEEEccCCC-EEEEeccCCcEEEEecC
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPVL----------IARLSHAQSKSPIRQTAMSYDGS-TILSCCEDGAIWRWDAI 292 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~ 292 (294)
++. .++++++.||.|++||+....... .....+.+|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 332 ~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCT-TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCC-CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 985 479999999999999998732110 12222347888999999999999 89999999999999986
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-39 Score=252.90 Aligned_cols=239 Identities=16% Similarity=0.263 Sum_probs=205.3
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee---c--ccCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF---V--GHGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
.|.+.|.+++|+ |+++ +|++++ ||.|++||+.+++....+ . .|...|.+++|+| ++++|++++.||.|++
T Consensus 49 ~h~~~v~~~~~~--~~~~-~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 49 NHGEVVCAVTIS--NPTR-HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSI 123 (337)
T ss_dssp CCSSCCCEEEEC--SSSS-EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEE
T ss_pred cCCCceEEEEEe--cCCc-EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEE
Confidence 789999999998 8998 899988 999999999877644333 2 7899999999999 8899999999999999
Q ss_pred EEcCCCc--eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 81 WNVQTGI--CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 81 wd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
||+.+++ ....+. .|...|.+++|+| ++.++++++.||.|++||+++ ....
T Consensus 124 ~d~~~~~~~~~~~~~---~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~-----------------------~~~~ 176 (337)
T 1gxr_A 124 WDLAAPTPRIKAELT---SSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN-----------------------QTLV 176 (337)
T ss_dssp EECCCC--EEEEEEE---CSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------TEEE
T ss_pred EECCCCCcceeeecc---cCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCC-----------------------Ccee
Confidence 9999887 444555 6899999999999 889999999999999999987 3445
Q ss_pred EEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 159 FIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
..+..|...+.++.|+ ++++++++.|+.|++||+++++ .+.... +...+.+++|+|++ .++++++.
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~~-~~~~v~~~~~s~~~--~~l~~~~~ 244 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR---------QLQQHD-FTSQIFSLGYCPTG--EWLAVGME 244 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------EEEEEE-CSSCEEEEEECTTS--SEEEEEET
T ss_pred eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc---------eEeeec-CCCceEEEEECCCC--CEEEEEcC
Confidence 6677899999999996 7799999999999999998764 333333 56779999999998 68999999
Q ss_pred CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 237 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 237 dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+|.|++||+++.+. ..+. .|..+|.+++|+|++++|++++.||.|++||+++
T Consensus 245 ~~~i~~~~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 245 SSNVEVLHVNKPDK---YQLH--LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp TSCEEEEETTSSCE---EEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCcEEEEECCCCCe---EEEc--CCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 99999999998753 2222 6778999999999999999999999999999875
No 49
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.2e-40 Score=273.56 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=213.1
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.|+.|+++|++++|+ |||+ +||+|+.|+.|+|||. ++++++++.+|..+|++++|+| ++++|++++.|++|++||
T Consensus 11 ~L~GH~~~V~~~a~s--pdg~-~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFS--PDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWN 85 (577)
T ss_dssp EECCCSSCEEEEEEC--TTSS-CEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EECCCCCcEEEEEEC--CCCC-EEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEE
Confidence 367899999999998 9999 9999999999999995 7888899999999999999999 899999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccc-------eeecCCCCCCC-----
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS-------FTWTDLPSKFP----- 150 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~~~~~~~~~----- 150 (294)
. +++.+..+. +|...|.+++|+| ++.+|++++.|+.+++|+........... ..+........
T Consensus 86 ~-~~~~~~~~~---~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (577)
T 2ymu_A 86 R-NGQLLQTLT---GHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD 160 (577)
T ss_dssp T-TSCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred C-CCCEEEEEE---CCCCCEEEEEECC-CCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccc
Confidence 6 677777777 7999999999999 88999999999999999976532211110 00000000000
Q ss_pred -----CceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEc
Q 022590 151 -----TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 223 (294)
Q Consensus 151 -----~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 223 (294)
.............|...|.++.++ ++++++++.|+.|++||... ..+..+..+...+.+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~----------~~~~~~~~~~~~v~~~~~s 230 (577)
T 2ymu_A 161 KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----------QLLQTLTGHSSSVRGVAFS 230 (577)
T ss_dssp SEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS----------CEEEEEECCSSCEEEEEEC
T ss_pred cceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCC----------cEEEEEecCCCCEEEEEEC
Confidence 000012234556788889999886 78999999999999999642 2567788889999999999
Q ss_pred ccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 224 CDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 224 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
|++ .+|++++.|+.|++||.... ....+. .|...|++++|+|++++|++++.|+.|++||..
T Consensus 231 ~dg--~~l~~~~~d~~i~~w~~~~~---~~~~~~--~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~ 292 (577)
T 2ymu_A 231 PDG--QTIASASDDKTVKLWNRNGQ---LLQTLT--GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN 292 (577)
T ss_dssp TTS--SCEEEEETTSCEEEECTTSC---EEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCC--CEEEEEeCCCEEEEEeCCCC---EEEEEe--cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC
Confidence 998 58999999999999996543 333343 778899999999999999999999999999975
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.9e-40 Score=263.69 Aligned_cols=261 Identities=17% Similarity=0.225 Sum_probs=200.9
Q ss_pred eeEEE-EEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 10 SFYTV-SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 10 ~v~~~-~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
.+.++ .|+ |+++ +|++|+.||.|++||+.+++....+.+|...|++++|+| ++++|++|+.|++|++||+.+++.
T Consensus 98 ~~~~~~~~~--~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 98 DYTAVDTAK--LQMR-RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp CEEEEEEEC--SSSC-EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCC
T ss_pred CceEEEEEe--cCCC-EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcC
Confidence 34444 444 8898 999999999999999999998888889999999999999 889999999999999999999999
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceee----eceEEeecC
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ----FPVFIASVH 164 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 164 (294)
+..+. +|...|.+++|+| ++.+|++++.||.|++||+++.......... ..... ...... ........+
T Consensus 174 ~~~~~---~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~~~~~~~ 246 (420)
T 3vl1_A 174 PRTLI---GHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRK--ENPHD-GVNSIALFVGTDRQLHEIS 246 (420)
T ss_dssp CEEEE---CCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBT--TBTTC-CEEEEEEEECCCSSCGGGC
T ss_pred ceEEc---CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecC--CCCCC-CccEEEEecCCcceeeecc
Confidence 88887 7999999999999 8899999999999999999874322211100 00000 000000 000011234
Q ss_pred CCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEE
Q 022590 165 SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV 242 (294)
Q Consensus 165 ~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i 242 (294)
...+.+++|+ +++|++++.||.|++||+++++. .......+...+.+++|+|++. .+|++|+.||.|++
T Consensus 247 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 247 TSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--------TIQLPSKFTCSCNSLTVDGNNA-NYIYAGYENGMLAQ 317 (420)
T ss_dssp CCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE--------EEEECCTTSSCEEEEEECSSCT-TEEEEEETTSEEEE
T ss_pred cCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce--------eEEcccccCCCceeEEEeCCCC-CEEEEEeCCCeEEE
Confidence 5778888886 78999999999999999987652 2233344678899999999984 38999999999999
Q ss_pred EeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 243 WELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 243 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
||+++.+... ..+. ..|..+|.++.+ +++++|++++.||.|++|++..
T Consensus 318 wd~~~~~~~~-~~~~-~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 318 WDLRSPECPV-GEFL-INEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EETTCTTSCS-EEEE-ESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred EEcCCCcCch-hhhh-ccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 9999875322 2222 135677888855 5788999999999999999864
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-39 Score=251.97 Aligned_cols=238 Identities=14% Similarity=0.268 Sum_probs=207.9
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.|...|.+++|+ |+++ +|++++.||.|++||+.+++ ....+..|...|.+++|+| ++++|++++.||.|++||+
T Consensus 95 ~~~~~v~~~~~~--~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 95 NRDNYIRSCKLL--PDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp CTTSBEEEEEEC--TTSS-EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEEc--CCCC-EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeC
Confidence 688999999998 8998 99999999999999998877 5667788999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
++++.+..+. +|...|.+++|+| ++.+|++++.||.|++||++... .... ..
T Consensus 171 ~~~~~~~~~~---~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~-----------------------~~~~-~~ 222 (337)
T 1gxr_A 171 HNQTLVRQFQ---GHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGR-----------------------QLQQ-HD 222 (337)
T ss_dssp TTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE-----------------------EEEE-EE
T ss_pred CCCceeeeee---cccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCc-----------------------eEee-ec
Confidence 9999888887 6999999999999 88999999999999999998732 2222 24
Q ss_pred CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 164 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
+...+.+++|+ ++++++++.++.|++||++..+ ......+...+..++|+|++ .++++++.||.|+
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----------KYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLN 290 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----------EEEECCCSSCEEEEEECTTS--SEEEEEETTSEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----------eEEEcCCccceeEEEECCCC--CEEEEecCCCcEE
Confidence 67788999996 7899999999999999998764 33566778899999999998 5899999999999
Q ss_pred EEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 242 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+||+.+++.. ... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 291 ~~~~~~~~~~--~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 291 AWRTPYGASI--FQS---KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEETTTCCEE--EEE---ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEECCCCeEE--EEe---cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9999998744 222 456789999999999999999999999999974
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5e-40 Score=265.55 Aligned_cols=263 Identities=21% Similarity=0.352 Sum_probs=212.8
Q ss_pred ccccCcee-EEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 4 VDQKEESF-YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 4 ~~~h~~~v-~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
+..|.+.| .++++ +++ +|++|+.||.|++||+.+++.+..+.+|.+.|++++|+| ++ +|++|+.||+|++||
T Consensus 117 l~~h~~~v~~~~~~----~~~-~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 117 LRGHMTSVITCLQF----EDN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EECCSSSCEEEEEE----ETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEE
T ss_pred EcCCCCCcEEEEEE----CCC-EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEE
Confidence 45787775 55555 355 899999999999999999999999999999999999998 55 999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEec-CCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
+.+++.+..+. +|...|.+++|++ .++.++++|+.||.|++||++...............................
T Consensus 190 ~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 190 IKKGCCTHVFE---GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp TTTTEEEEEEC---CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred CCCCcEEEEEC---CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999988887 6999999999995 2668999999999999999987433221111000000000001111225567
Q ss_pred ecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 162 SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 162 ~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
.+|...+.++..+++++++++.|+.|++||+++++ .+..+..|...+.+++|+|++ .++++|+.||.|+
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~---------~~~~~~~~~~~v~~~~~~~~~--~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK---------CLYILSGHTDRIYSTIYDHER--KRCISASMDTTIR 335 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEE
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EEEEecCCCCCEEEEEEcCCC--CEEEEEeCCCcEE
Confidence 88999999999999999999999999999998654 677788889999999999998 5899999999999
Q ss_pred EEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 242 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+||+++++ ....+. .|...|.+++|+ +++|++++.||.|++||+++
T Consensus 336 vwd~~~~~--~~~~~~--~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 336 IWDLENGE--LMYTLQ--GHTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EEETTTTE--EEEEEC--CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred EEECCCCc--EEEEEe--CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999876 334444 788899999997 57999999999999999875
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-39 Score=259.98 Aligned_cols=247 Identities=20% Similarity=0.366 Sum_probs=205.1
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.+.|++++|+ |+|+ +||+|+.||.|+|||+.+++.+..+.+|...+.++++++ .+|++|+.|+.+++||.
T Consensus 143 ~~~~~~~V~sv~fs--pdg~-~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 143 MEQPGEYISSVAWI--KEGN-YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDV 216 (420)
T ss_dssp CCSTTCCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEET
T ss_pred ecCCCCcEEEEEEC--CCCC-EEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeee
Confidence 35788899999998 9999 999999999999999999999999999999999998864 79999999999999999
Q ss_pred CCCc-eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
.... .+..+. +|...+..+.|+| ++.++++++.|+.+++|+....... ........
T Consensus 217 ~~~~~~~~~~~---~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~-------------------~~~~~~~~ 273 (420)
T 4gga_A 217 RVAEHHVATLS---GHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGG-------------------WVPLQTFT 273 (420)
T ss_dssp TSSSCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSC-------------------SCCSEEEC
T ss_pred cccceeeEEec---ccccceeeeeecC-CCCeeeeeeccccceEEeecccccc-------------------ceeeeeec
Confidence 8654 445555 7999999999999 8899999999999999999873211 22345667
Q ss_pred cCCCceeeccee---cceEEE--eeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 163 VHSNYVDCNRWL---GDFILS--KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 163 ~~~~~i~~~~~~---~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.|...|.+++|+ +..+++ |+.|+.|++||+++++ ....+.. ...+.++.|+|++...+.++|+.|
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~---------~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA---------CLSAVDA-HSQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE---------EEEEEEC-SSCEEEEEEETTTTEEEEEECTTT
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc---------cceeecc-ccceeeeeecCCCCeEEEEEecCC
Confidence 789999999996 456655 4579999999998765 4444444 456889999999853222334589
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|.|++||+.+.++ +..+. +|...|++++|+|+|++|+||+.||+|+|||+.+
T Consensus 344 ~~I~iwd~~~~~~--v~~l~--gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 344 NQLVIWKYPTMAK--VAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CCEEEEETTTCCE--EEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CEEEEEECCCCcE--EEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 9999999998864 44444 8889999999999999999999999999999853
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.5e-40 Score=261.29 Aligned_cols=246 Identities=17% Similarity=0.178 Sum_probs=206.8
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc------ccceecccCcceEEEEeCCCC----C---ceEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK------LHKSFVGHGDSINEIRTQPLK----P---SLVV 70 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~h~~~v~~~~~~~~~----~---~~l~ 70 (294)
++.|.++|++++|+ | + +|++|+.||.|++|++.+++ ....+.+|..+|++++|+| + + .+|+
T Consensus 12 ~~~h~~~i~~~~~~--~--~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 12 GKAHDADIFSVSAC--N--S-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVA 85 (397)
T ss_dssp SSCSSSCEEEEEEC--S--S-EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEE
T ss_pred hhhhhcCeEEEEec--C--C-eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEE
Confidence 46899999999997 5 4 89999999999999999887 7788889999999999999 7 8 8999
Q ss_pred EeeCCCcEEEEEcCCCce-----EEEeeccCCC-----CCceeEEEEe----cCCCce-EEeeecCCcEEEEeccc----
Q 022590 71 SASKDESVRLWNVQTGIC-----ILIFAGAGGH-----RNEVLSVDFH----PSDIYR-IASCGMDNTVKIWSMKE---- 131 (294)
Q Consensus 71 s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~-----~~~v~~l~~~----~~~~~~-l~~~~~dg~i~~wd~~~---- 131 (294)
+++.||.|++||+.+++. ...+. .| ...|.+++|+ | ++.+ |++++.||.|++||++.
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEcCCCCEEEEEccCCcccccccceeec---ccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccc
Confidence 999999999999998886 67776 56 5899999999 8 7888 99999999999999987
Q ss_pred --cccccccceeecCCCCCCCCceeeeceEEe-------ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCC
Q 022590 132 --FWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-------SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG 200 (294)
Q Consensus 132 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~ 200 (294)
..... ..+...+ ..|...|.+++|+ + ++++++.|+.|++||+++++
T Consensus 162 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~---- 218 (397)
T 1sq9_A 162 SNSLTLN------------------WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR---- 218 (397)
T ss_dssp HHHTTTC------------------CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE----
T ss_pred cccceee------------------ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc----
Confidence 22110 0011122 4588899999997 6 99999999999999998654
Q ss_pred CCCceeeeeeec---C---CCCeeEEEEcccCCcceEEEEcCC---CeEEEEeccCCCceeeeeccccc-----------
Q 022590 201 EGTADILQKYPV---P---ECDIWFIKFSCDFHYNAAAIGNRE---GKIFVWELQSSPPVLIARLSHAQ----------- 260 (294)
Q Consensus 201 ~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~----------- 260 (294)
.+..+.. | ...+.+++|+|++ .+|++++.| |.|++||+++.+... .+. .
T Consensus 219 -----~~~~~~~~~~h~~~~~~i~~i~~~~~~--~~l~~~~~d~~~g~i~i~d~~~~~~~~--~~~--~~~~~~~~~~~~ 287 (397)
T 1sq9_A 219 -----PLYNFESQHSMINNSNSIRSVKFSPQG--SLLAIAHDSNSFGCITLYETEFGERIG--SLS--VPTHSSQASLGE 287 (397)
T ss_dssp -----EEEEEECCC---CCCCCEEEEEECSST--TEEEEEEEETTEEEEEEEETTTCCEEE--EEC--BC--------CC
T ss_pred -----eeEEEeccccccccCCccceEEECCCC--CEEEEEecCCCCceEEEEECCCCcccc--eec--cCcccccccccc
Confidence 5666777 7 8899999999998 689999999 999999999886433 333 3
Q ss_pred --cCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 261 --SKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 261 --~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|...|.+++|+|++++|++++.||.|++||+++
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 788999999999999999999999999999864
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.4e-40 Score=282.38 Aligned_cols=248 Identities=15% Similarity=0.223 Sum_probs=217.0
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.+..|.+.|.+++|+ |+|+ +|++|+.||.|+|||+.+++.+..+.+|..+|++++|+| ++++|++|+.||.|++||
T Consensus 8 ~~~~h~~~v~~i~~s--p~~~-~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFH--PTEP-WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp EEEEECSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEE
T ss_pred eeecCCCceEEEEEC--CCCC-EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 356899999999998 8998 999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.+++.+..+. +|...|++++|+| ++.+|++++.||.|++||++.. ......+.
T Consensus 84 ~~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~----------------------~~~~~~~~ 137 (814)
T 3mkq_A 84 YNTGEKVVDFE---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENN----------------------WALEQTFE 137 (814)
T ss_dssp TTTCCEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGT----------------------SEEEEEEE
T ss_pred CCCCcEEEEEe---cCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCC----------------------ceEEEEEc
Confidence 99999998888 6999999999999 8889999999999999999873 13455677
Q ss_pred cCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 163 VHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 163 ~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
.|...|.+++|+ ++.+++++.||.|++||++.+.. ...... +...+..++|+|.+.+.++++++.||
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 208 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDL 208 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC---------SEEEECCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---------eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence 899999999996 56999999999999999986652 233333 34789999999943337999999999
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++||+.+++. ...+. .|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 209 ~i~~~d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 209 TIKIWDYQTKSC--VATLE--GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEEEETTTTEE--EEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEECCCCcE--EEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 999999988753 33333 6778999999999999999999999999999864
No 56
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.9e-40 Score=256.10 Aligned_cols=201 Identities=9% Similarity=0.000 Sum_probs=160.8
Q ss_pred ceEEEEeCCCCCceEEE--eeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecccc
Q 022590 55 SINEIRTQPLKPSLVVS--ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 132 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~ 132 (294)
.+.+++|+| +++++++ ++.|++|+|||+.+++.+..+. |...|.+++|+| ++.++++++.+ .+++|+..+.
T Consensus 135 ~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~----~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~ 207 (365)
T 4h5i_A 135 YTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE----TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTG 207 (365)
T ss_dssp CEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE----CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTC
T ss_pred CEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC----CCCceEEEEEcc-CCceEEeccce-eEEEEEeccC
Confidence 467899999 8888764 4579999999999999988876 888999999999 88999998855 5666666552
Q ss_pred ccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCC----eEEEecCCCCCCCCCCCCcee
Q 022590 133 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN----EIVLWEPKMKEQSPGEGTADI 206 (294)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~ 206 (294)
. .........|...|.+++|+ +.++++++.|+ .+++||+..... ....
T Consensus 208 ~---------------------~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-----~~~~ 261 (365)
T 4h5i_A 208 S---------------------CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT-----SVLR 261 (365)
T ss_dssp C---------------------EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE-----EEEE
T ss_pred c---------------------ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee-----ccee
Confidence 1 11223345688889999997 78899998887 688898875532 1223
Q ss_pred eeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcE
Q 022590 207 LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286 (294)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 286 (294)
...+..+...|++++|+|++ .+||+|+.|+.|+|||++++++. ..+ ..+|..+|++++|+|||++||+||.|++|
T Consensus 262 ~~~~~~~~~~V~~~~~Spdg--~~lasgs~D~~V~iwd~~~~~~~--~~~-~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 262 SKQVTNRFKGITSMDVDMKG--ELAVLASNDNSIALVKLKDLSMS--KIF-KQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEEEESSCSCEEEEEECTTS--CEEEEEETTSCEEEEETTTTEEE--EEE-TTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eeeecCCCCCeEeEEECCCC--CceEEEcCCCEEEEEECCCCcEE--EEe-cCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 45667788899999999999 69999999999999999987632 221 12788999999999999999999999999
Q ss_pred EEEecCC
Q 022590 287 WRWDAIP 293 (294)
Q Consensus 287 ~vw~~~~ 293 (294)
+|||+.+
T Consensus 337 rvw~ip~ 343 (365)
T 4h5i_A 337 HIIKLPL 343 (365)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 9999853
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=264.40 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=195.7
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc-----------ccceecccC------------cceEEEEeC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK-----------LHKSFVGHG------------DSINEIRTQ 62 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~h~------------~~v~~~~~~ 62 (294)
++.+.|++++|+ |+|+ +||+|+.||.|+||++.+++ ....+.+|. ..|++++|+
T Consensus 26 ~~~~~V~~v~~s--~~g~-~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFN--HSGE-LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEEC--SSSS-EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEEC--CCCC-EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 567899999998 8998 99999999999999998876 477888998 889999999
Q ss_pred CCCC--ceEEEeeCCCcEEEEEcCCCceEEE-------------------------------------eeccCCCCCcee
Q 022590 63 PLKP--SLVVSASKDESVRLWNVQTGICILI-------------------------------------FAGAGGHRNEVL 103 (294)
Q Consensus 63 ~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~-------------------------------------~~~~~~~~~~v~ 103 (294)
| ++ .+|++++.|++|++||+.+++.... .....+|...|.
T Consensus 103 ~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 103 P-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp C-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred C-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9 65 7899999999999999976543210 000236999999
Q ss_pred EEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--c-ceEEE
Q 022590 104 SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--G-DFILS 180 (294)
Q Consensus 104 ~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~ 180 (294)
+++|+| ++.+|++| .|+.|++||++......... ......+..|...|.+++|+ + ++|++
T Consensus 182 ~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~---------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 244 (447)
T 3dw8_B 182 SISINS-DYETYLSA-DDLRINLWHLEITDRSFNIV---------------DIKPANMEELTEVITAAEFHPNSCNTFVY 244 (447)
T ss_dssp EEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEE---------------ECCCSSGGGCCCCEEEEEECSSCTTEEEE
T ss_pred EEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeee---------------ecccccccccCcceEEEEECCCCCcEEEE
Confidence 999999 88899998 79999999999521100000 00001356789999999997 4 79999
Q ss_pred eeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC------------CeeEEEEcccCCcceEEEEcCCCeEEEEeccC-
Q 022590 181 KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------------DIWFIKFSCDFHYNAAAIGNREGKIFVWELQS- 247 (294)
Q Consensus 181 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~- 247 (294)
++.||.|++||+++++.. ......+..+.. .+.+++|+|++ .+|++++. +.|++||++.
T Consensus 245 ~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 245 SSSKGTIRLCDMRASALC-----DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG--RYMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp EETTSCEEEEETTTCSSS-----CTTCEEECCC-----CCHHHHHTTCEEEEEECTTS--SEEEEEES-SEEEEEETTCC
T ss_pred EeCCCeEEEEECcCCccc-----cceeeEeccCCCccccccccccCceEEEEEECCCC--CEEEEeeC-CeEEEEeCCCC
Confidence 999999999999987531 111344555554 89999999998 58999988 9999999987
Q ss_pred CCceeeeeccccccCC---------------CeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 248 SPPVLIARLSHAQSKS---------------PIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 248 ~~~~~~~~~~~~~~~~---------------~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.++... +. .|.. .+..++|+|++++|++|+.||.|++||+++
T Consensus 317 ~~~~~~--~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 317 NRPVET--YQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp SSCSCC--EE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccce--ee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 543322 22 2221 133499999999999999999999999864
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.5e-40 Score=262.16 Aligned_cols=250 Identities=13% Similarity=0.169 Sum_probs=208.7
Q ss_pred ccccCceeEEEEEeecCC----C---ceEEEEeecCCeEEEEEcCCccc-----cceeccc-----CcceEEEEeC----
Q 022590 4 VDQKEESFYTVSWACNVD----G---IPFLVAGGINGIIRVIDVSNEKL-----HKSFVGH-----GDSINEIRTQ---- 62 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~----~---~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~h-----~~~v~~~~~~---- 62 (294)
+..|..+|++++|+ |+ | + +|++++.||.|++|++.+++. ...+..| ...|.+++|+
T Consensus 58 ~~~h~~~v~~~~~~--~~~~~~g~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 58 HFVHKSGLHHVDVL--QAIERDAFELC-LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EECCTTCEEEEEEE--EEEETTTEEEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred EecCCCcEEEEEEe--cccccCCcccc-EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 34789999999998 66 7 7 999999999999999998887 7888888 5899999999
Q ss_pred CCCCce-EEEeeCCCcEEEEEcCC------CceEE-----Eeec----cCCCCCceeEEEEecCCCceEEeeecCCcEEE
Q 022590 63 PLKPSL-VVSASKDESVRLWNVQT------GICIL-----IFAG----AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 126 (294)
Q Consensus 63 ~~~~~~-l~s~~~dg~i~vwd~~~------~~~~~-----~~~~----~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~ 126 (294)
| ++.+ |++++.||.|++||+.+ ++.+. .+.. ...|...|.+++|+| ++ +|++++.||.|++
T Consensus 135 ~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 135 R-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQI 211 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEE
T ss_pred C-CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEE
Confidence 8 7888 99999999999999988 66555 5531 024889999999999 77 9999999999999
Q ss_pred EeccccccccccceeecCCCCCCCCceeeeceEEeec---C---CCceeeccee--cceEEEeeCC---CeEEEecCCCC
Q 022590 127 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV---H---SNYVDCNRWL--GDFILSKSVD---NEIVLWEPKMK 195 (294)
Q Consensus 127 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~~~~~--~~~l~~~~~d---~~i~iwd~~~~ 195 (294)
||+++ ..+...+.. | ...|.+++|+ +++|++++.| +.|++||++++
T Consensus 212 ~d~~~-----------------------~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 212 SELST-----------------------LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EETTT-----------------------TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred EECCC-----------------------CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 99987 344556666 8 8999999996 8899999999 99999999876
Q ss_pred CCCCCCCCceeeeeeec-------------CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc--ccc
Q 022590 196 EQSPGEGTADILQKYPV-------------PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS--HAQ 260 (294)
Q Consensus 196 ~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~ 260 (294)
+ .+..+.. +...+.+++|+|++ .+|++++.||.|++||+++.+........ ...
T Consensus 269 ~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 337 (397)
T 1sq9_A 269 E---------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG--ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE 337 (397)
T ss_dssp C---------EEEEECBC--------CCBSBSSCEEEEEECSSS--SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS
T ss_pred c---------ccceeccCcccccccccccccCCcEEEEEECCCC--CEEEEEeCCCeEEEEEcCCCceeEEEecccCccc
Confidence 4 4566666 78899999999998 68999999999999999988654443311 013
Q ss_pred c---------------CCCeEEEEEccCC----------CEEEEeccCCcEEEEecCC
Q 022590 261 S---------------KSPIRQTAMSYDG----------STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 261 ~---------------~~~v~~~~~s~~~----------~~l~s~~~dg~i~vw~~~~ 293 (294)
| ..+|++++|+|++ ++|++++.||.|++|++++
T Consensus 338 ~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 338 IEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp SGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred chhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 3 7899999999998 7999999999999999865
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-40 Score=260.84 Aligned_cols=256 Identities=17% Similarity=0.257 Sum_probs=207.6
Q ss_pred cccCceeEEEEEeec-CCCceEEEEeecCCeEEEEEcCCccccceecc-----cCcceEEEEeCCCC----CceEEEeeC
Q 022590 5 DQKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-----HGDSINEIRTQPLK----PSLVVSASK 74 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----h~~~v~~~~~~~~~----~~~l~s~~~ 74 (294)
+.|.++|++++|++. +++...+++++.++.|++||+.+++.+..+.. |...|++++|+| + +.+|++|+.
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY-DSNTSHPLLAVAGS 93 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEEEEEET
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc-CCCCCCCEEEEecC
Confidence 479999999999832 12444788888888999999998887777654 557899999999 5 569999999
Q ss_pred CCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCcee
Q 022590 75 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
||.|++||+.+++.+..+. +|...|.+++|+|.++.+|++++.||.|++||++..
T Consensus 94 dg~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------------------- 148 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYV---GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD---------------------- 148 (366)
T ss_dssp TCEEEEECTTTCCEEEEEE---SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT----------------------
T ss_pred CCEEEEEEchhceEeeeec---CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC----------------------
Confidence 9999999999999998888 699999999999977889999999999999999873
Q ss_pred eeceEEe---ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCC-------------------CCCceeeeee
Q 022590 155 QFPVFIA---SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG-------------------EGTADILQKY 210 (294)
Q Consensus 155 ~~~~~~~---~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~-------------------~~~~~~~~~~ 210 (294)
.....+ ..|...|.+++|+ +++|++++.||.|++||+++++.... ..........
T Consensus 149 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 149 -TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp -EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred -eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 333444 6799999999997 78999999999999999986532100 0000112233
Q ss_pred ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc------------eeeeeccccccCCCeEEEEEccC--CCE
Q 022590 211 PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP------------VLIARLSHAQSKSPIRQTAMSYD--GST 276 (294)
Q Consensus 211 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------~~~~~~~~~~~~~~v~~~~~s~~--~~~ 276 (294)
..+...+.+++|+ + .++++++.||.|++||+.+.+. .....+ ..|...|.+++|+|+ +++
T Consensus 228 ~~~~~~v~~~~~~--~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 228 DIHRNYVDCVRWL--G--DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF--DYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp SSCSSCCCEEEEE--T--TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE--ECSSCCSSCCCCEECTTSSE
T ss_pred cCCcceEEEEEEc--C--CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc--cccCCcEEEEEEcCCCCCcE
Confidence 3478889999998 3 5899999999999999987653 122233 367788999999999 999
Q ss_pred EEEeccCCcEEEEecCC
Q 022590 277 ILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 277 l~s~~~dg~i~vw~~~~ 293 (294)
|++|+.||.|++||+++
T Consensus 302 l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EEEECTTSCEEEEECCS
T ss_pred EEEEecCCcEEEEECCC
Confidence 99999999999999874
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.9e-40 Score=257.05 Aligned_cols=266 Identities=16% Similarity=0.146 Sum_probs=208.5
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccce--ecccCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS--FVGHGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
+..|...|.+++|+ |+++ +|++++.||.|++||+.+++.... +..|...|.+++|+| ++++|++++.||.|++|
T Consensus 48 ~~~h~~~v~~~~~~--~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 48 LKEHNGQVTGVDWA--PDSN-RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EECCSSCEEEEEEE--TTTT-EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEE
T ss_pred ecCCCCcccEEEEe--CCCC-EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEE
Confidence 45799999999998 8898 999999999999999988864443 467899999999999 88999999999999999
Q ss_pred EcCCCce---EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 82 NVQTGIC---ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 82 d~~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
|+..++. ...+. .+|...|.+++|+| ++.+|++++.||.|++||++............ .. .........
T Consensus 124 d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~---~~~~~~~~~ 195 (372)
T 1k8k_C 124 YFEQENDWWVCKHIK--KPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP--WG---SKMPFGELM 195 (372)
T ss_dssp EEETTTTEEEEEEEC--TTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBT--TB---SCCCTTCEE
T ss_pred EecCCCcceeeeeee--cccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccc--cc---cccchhhhe
Confidence 9988773 22232 26899999999999 88999999999999999987422111000000 00 000112345
Q ss_pred EEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 159 FIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
..+..|...|.++.|+ +++|++++.|+.|++||+++++ .+..+..+...+.+++|+|++ .++++| .
T Consensus 196 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~--~~l~~~-~ 263 (372)
T 1k8k_C 196 FESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM---------AVATLASETLPLLAVTFITES--SLVAAG-H 263 (372)
T ss_dssp EECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT---------EEEEEECSSCCEEEEEEEETT--EEEEEE-T
T ss_pred EecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------eeEEEccCCCCeEEEEEecCC--CEEEEE-e
Confidence 5666899999999996 7799999999999999998765 577778888899999999998 577777 8
Q ss_pred CCeEEEEeccC--CCceeeee----------------------------------cc-ccccCCCeEEEEEc-cCC---C
Q 022590 237 EGKIFVWELQS--SPPVLIAR----------------------------------LS-HAQSKSPIRQTAMS-YDG---S 275 (294)
Q Consensus 237 dg~i~i~d~~~--~~~~~~~~----------------------------------~~-~~~~~~~v~~~~~s-~~~---~ 275 (294)
|+.|++|++.. ++...... .. ..+|..+|++++|. ++| +
T Consensus 264 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~ 343 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS 343 (372)
T ss_dssp TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS
T ss_pred CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee
Confidence 99999999988 32101000 11 23788999999976 666 9
Q ss_pred EEEEeccCCcEEEEecCC
Q 022590 276 TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 276 ~l~s~~~dg~i~vw~~~~ 293 (294)
+|++|+.||.|++||+++
T Consensus 344 ~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 344 QFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEEETTSEEEEEEHHH
T ss_pred eEEEecCCCceEEEEecC
Confidence 999999999999999853
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-40 Score=268.68 Aligned_cols=248 Identities=10% Similarity=-0.017 Sum_probs=194.5
Q ss_pred cccCceeEEEEEeec----CCCceEEEEeecCCeEEEEEcCCccc-----------cceecccCcceEEEEeCCCCCceE
Q 022590 5 DQKEESFYTVSWACN----VDGIPFLVAGGINGIIRVIDVSNEKL-----------HKSFVGHGDSINEIRTQPLKPSLV 69 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~----~~~~~~l~~~~~dg~i~iw~~~~~~~-----------~~~~~~h~~~v~~~~~~~~~~~~l 69 (294)
..|.+.|++++|++. +++. +||+++.||+|++||+.+++. ...+.+|...|++++|++ + ..|
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~-~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~l 280 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVG-CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTV 280 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSC-EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEE
T ss_pred EecCCcEEEEEECCCCCCCCCCc-eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeE
Confidence 456788999999843 2356 999999999999999987642 236778999999999998 5 489
Q ss_pred EEeeCCCcEEEEEcCCCc-eEEEeeccCCCCCceeEE--EEecCCC-ceEEeeecCCcEEEEeccccccccccceeecCC
Q 022590 70 VSASKDESVRLWNVQTGI-CILIFAGAGGHRNEVLSV--DFHPSDI-YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145 (294)
Q Consensus 70 ~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l--~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 145 (294)
++|+.||+|++||++++. ....+. +|...|+++ .|+| ++ .+|++|+.|++|++||+++..
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~---~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~------------ 344 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQ---VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIA------------ 344 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEE---CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHH------------
T ss_pred EEEeCCCEEEEEECCCCCCceEEee---cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCC------------
Confidence 999999999999998764 334455 699999999 5666 66 889999999999999999732
Q ss_pred CCCCCCceeeeceEEeecCC--Cceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 146 PSKFPTKYVQFPVFIASVHS--NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
....+.+|. ..|.+++|+ +..+++++.|++|++||++.+. .+..+..|...|++++
T Consensus 345 -----------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~---------~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 -----------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF---------AVHPLVSRETTITAIG 404 (524)
T ss_dssp -----------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT---------CCEEEEECSSCEEEEE
T ss_pred -----------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc---------cceeeecCCCceEEEE
Confidence 222333443 247889997 6689999999999999998765 3455667899999999
Q ss_pred EcccCCcceEEEEcCCCeEEEEeccCCCce------------eee----------------------------ecccccc
Q 022590 222 FSCDFHYNAAAIGNREGKIFVWELQSSPPV------------LIA----------------------------RLSHAQS 261 (294)
Q Consensus 222 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------------~~~----------------------------~~~~~~~ 261 (294)
|+|++ .+|++|+.||.|++||+...... ... .....+|
T Consensus 405 ~Sp~g--~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh 482 (524)
T 2j04_B 405 VSRLH--PMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAH 482 (524)
T ss_dssp CCSSC--CBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------C
T ss_pred eCCCC--CeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCC
Confidence 99998 58999999999999986432100 000 0112357
Q ss_pred CCCeEEEEEccCCC---EEEEeccCCcEEEEecCC
Q 022590 262 KSPIRQTAMSYDGS---TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 262 ~~~v~~~~~s~~~~---~l~s~~~dg~i~vw~~~~ 293 (294)
..+|.+++|+|+++ .||+|+.||.|+||+++-
T Consensus 483 ~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 483 GINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred CceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 78999999999964 999999999999999874
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-41 Score=272.73 Aligned_cols=244 Identities=11% Similarity=0.159 Sum_probs=189.7
Q ss_pred cCceeEEEEEeecCCCc------eEEEE-------------------eecCCeEEEEEcCCcccc----ceecccCcceE
Q 022590 7 KEESFYTVSWACNVDGI------PFLVA-------------------GGINGIIRVIDVSNEKLH----KSFVGHGDSIN 57 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~------~~l~~-------------------~~~dg~i~iw~~~~~~~~----~~~~~h~~~v~ 57 (294)
+.+.|++++|++.+.+. ++||+ ++.|++|+||++.+++.. ..+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56789999998654221 26666 457789999999887643 34567889999
Q ss_pred EEEeCCC-----CCceEEEeeCCCcEEEEEcCCCceE-----------EEeeccCCCCCceeEEEEecCCCceEEeeecC
Q 022590 58 EIRTQPL-----KPSLVVSASKDESVRLWNVQTGICI-----------LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 121 (294)
Q Consensus 58 ~~~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d 121 (294)
+++|+|. ++.+||+++.||+|++||+.++... ..+. +|...|++++|+| ++ .|++|+.|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~---~h~~~v~sv~~s~-~~-~lasgs~D 286 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS---LADSLITTFDFLS-PT-TVVCGFKN 286 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC---CTTTCEEEEEESS-SS-EEEEEETT
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE---cCCCCEEEEEecC-CC-eEEEEeCC
Confidence 9999993 2579999999999999999866421 2334 6999999999997 54 79999999
Q ss_pred CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeec--cee--c-ceEEEeeCCCeEEEecCCCCC
Q 022590 122 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN--RWL--G-DFILSKSVDNEIVLWEPKMKE 196 (294)
Q Consensus 122 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~--~-~~l~~~~~d~~i~iwd~~~~~ 196 (294)
|+|++||+++. ..+...+..|...|.++ .|+ + .+|++++.|++|++||+++++
T Consensus 287 gtV~lWD~~~~----------------------~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~ 344 (524)
T 2j04_B 287 GFVAEFDLTDP----------------------EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA 344 (524)
T ss_dssp SEEEEEETTBC----------------------SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH
T ss_pred CEEEEEECCCC----------------------CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC
Confidence 99999999862 12345678899999999 455 4 689999999999999998754
Q ss_pred CCCCCCCceeeeeeecCC--CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC
Q 022590 197 QSPGEGTADILQKYPVPE--CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274 (294)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (294)
. ...+..+. ..+.+++|+|++ ..+++++.|+.|++||+++.... ..+. +|...|++++|+|+|
T Consensus 345 ~---------~~~~~~~~~~~~v~~v~fsp~~--~~l~s~~~d~tv~lwd~~~~~~~--~~l~--gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 345 T---------TKTTVSRFRGSNLVPVVYCPQI--YSYIYSDGASSLRAVPSRAAFAV--HPLV--SRETTITAIGVSRLH 409 (524)
T ss_dssp H---------HCEEEEECSCCSCCCEEEETTT--TEEEEECSSSEEEEEETTCTTCC--EEEE--ECSSCEEEEECCSSC
T ss_pred c---------ccccccccccCcccceEeCCCc--CeEEEeCCCCcEEEEECcccccc--eeee--cCCCceEEEEeCCCC
Confidence 2 22222222 347889999998 47999999999999999987632 2333 788999999999999
Q ss_pred CEEEEeccCCcEEEEecC
Q 022590 275 STILSCCEDGAIWRWDAI 292 (294)
Q Consensus 275 ~~l~s~~~dg~i~vw~~~ 292 (294)
++|++|+.||+|++||+.
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAA 427 (524)
T ss_dssp CBCEEEETTTEEECCBSC
T ss_pred CeEEEEECCCEEEEEech
Confidence 999999999999999974
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-41 Score=268.10 Aligned_cols=256 Identities=18% Similarity=0.277 Sum_probs=211.4
Q ss_pred ccccCceeEEEEEeecCC-CceEEEEeecCCeEEEEEcCCcc------ccc---eecccCcceEEEEeCCCCCceEEEee
Q 022590 4 VDQKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEK------LHK---SFVGHGDSINEIRTQPLKPSLVVSAS 73 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~------~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~ 73 (294)
+..|.+.|.+++|+ |+ ++ +|++++.||.|++||+.+++ ... .+..|...|.+++|+|+++.+|++++
T Consensus 109 ~~~h~~~v~~~~~~--~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 109 FSNHSSSVKTVKFN--AKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp CCCSSSCCCEEEEC--SSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred ccCCccceEEEEEc--CCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 45799999999998 77 66 99999999999999998876 333 34679999999999994488999999
Q ss_pred CCCcEEEEEcCCCceEEEeeccC---CCCCceeEEEEecCCCceEEeeecCC---cEEEEeccccccccccceeecCCCC
Q 022590 74 KDESVRLWNVQTGICILIFAGAG---GHRNEVLSVDFHPSDIYRIASCGMDN---TVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 74 ~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~~l~~~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
.||.|++||+++++.+..+.... +|...|.+++|+|++..++++++.|+ .|++||++...
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------------- 251 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------------- 251 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT--------------
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC--------------
Confidence 99999999999999888877311 12789999999994457899999998 99999999731
Q ss_pred CCCCceeeeceEEee-cCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEc
Q 022590 148 KFPTKYVQFPVFIAS-VHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 223 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~-~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 223 (294)
.+...+. .|...|.+++|+ +++|++++.|+.|++||+++++ .+..+..|...+.+++|+
T Consensus 252 --------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---------~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 252 --------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---------QLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp --------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC---------EEEEEECSSSCCCCEEEC
T ss_pred --------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---------cceeecCCCCceEEEEEC
Confidence 2334455 789999999995 6899999999999999998765 677788889999999999
Q ss_pred ccCCcceEEEEcCCCeEEEEeccCCCceeeee-------------cc------------------ccccCCCeEEEEEcc
Q 022590 224 CDFHYNAAAIGNREGKIFVWELQSSPPVLIAR-------------LS------------------HAQSKSPIRQTAMSY 272 (294)
Q Consensus 224 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------~~------------------~~~~~~~v~~~~~s~ 272 (294)
|++. .++++++.||.|++||+.+.+...... +. ...+..++.+++|+|
T Consensus 315 ~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 393 (416)
T 2pm9_A 315 PEAP-DLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF 393 (416)
T ss_dssp TTCT-TEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET
T ss_pred CCCC-CEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee
Confidence 9974 589999999999999998765322210 00 011567888999999
Q ss_pred CCCEEEEeccCCcEEEEecCCC
Q 022590 273 DGSTILSCCEDGAIWRWDAIPT 294 (294)
Q Consensus 273 ~~~~l~s~~~dg~i~vw~~~~~ 294 (294)
+|++|++++.||.|+||++.++
T Consensus 394 dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 394 GGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp TTEEECBCTTSSCBCCBCCCCC
T ss_pred CCeEEEEeCCCCeEEEEEeccC
Confidence 9999999999999999999874
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=257.52 Aligned_cols=252 Identities=12% Similarity=0.209 Sum_probs=205.1
Q ss_pred ccCceeEEEEEeecCC---CceEEEEeecCCeEEEEEcCCcc-ccceecccCcceEEEE------eCCCCCceEEEeeCC
Q 022590 6 QKEESFYTVSWACNVD---GIPFLVAGGINGIIRVIDVSNEK-LHKSFVGHGDSINEIR------TQPLKPSLVVSASKD 75 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~h~~~v~~~~------~~~~~~~~l~s~~~d 75 (294)
.|..+|.+++|+ |+ |+ +|++|+.||.|++||+.+++ .+..+.+|...|.+++ |+| ++++|++++.|
T Consensus 63 ~~~~~v~~~~~~--~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d 138 (357)
T 3i2n_A 63 EKAKPIKCGTFG--ATSLQQR-YLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRD 138 (357)
T ss_dssp EESSCEEEEECT--TCCTTTC-CEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETT
T ss_pred cccCcEEEEEEc--CCCCCCc-eEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCC
Confidence 688999999998 66 56 99999999999999999888 8889999999999995 567 88899999999
Q ss_pred CcEEEEEcCCCc-eEEEeeccCCC-CCceeEEE----EecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCC
Q 022590 76 ESVRLWNVQTGI-CILIFAGAGGH-RNEVLSVD----FHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKF 149 (294)
Q Consensus 76 g~i~vwd~~~~~-~~~~~~~~~~~-~~~v~~l~----~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 149 (294)
|.|++||+.+++ .+..+....++ ...+.+++ |+| ++.+|++++.||.|++||++...
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~---------------- 201 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMA---------------- 201 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTE----------------
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCc----------------
Confidence 999999999887 66666532222 34899998 677 88999999999999999999732
Q ss_pred CCceeeeceEEeecCCCceeeccee-----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcc
Q 022590 150 PTKYVQFPVFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 224 (294)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 224 (294)
......|...|.++.|+ ++++++++.||.|++||+++.+... .........+...+.+++|+|
T Consensus 202 --------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~ 269 (357)
T 3i2n_A 202 --------LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK----GFASVSEKAHKSTVWQVRHLP 269 (357)
T ss_dssp --------EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT----EEEEEEEECCSSCEEEEEEET
T ss_pred --------eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc----ceeeeccCCCcCCEEEEEECC
Confidence 13345678899999996 5799999999999999998765311 011224457889999999999
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCce-----------------eeeeccccccCCCeEEEEEccCCCEEE-EeccCCcE
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPV-----------------LIARLSHAQSKSPIRQTAMSYDGSTIL-SCCEDGAI 286 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i 286 (294)
++. .++++++.||.|++||++..... .... ...|..+|++++|+|++++|+ +++.||.|
T Consensus 270 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 270 QNR-ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN--VTLSTQPISSLDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp TEE-EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE--EECCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred CCC-cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeec--cccCCCCeeEEEEcCCCCeEEEEecCCCcE
Confidence 983 38999999999999999875432 2222 337889999999999999998 89999999
Q ss_pred EEEecCC
Q 022590 287 WRWDAIP 293 (294)
Q Consensus 287 ~vw~~~~ 293 (294)
++||+..
T Consensus 347 ~iw~~~~ 353 (357)
T 3i2n_A 347 RVLIVTK 353 (357)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 9999864
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=256.41 Aligned_cols=249 Identities=14% Similarity=0.207 Sum_probs=200.7
Q ss_pred cccCceeEEEEEeecCCCceEEEEeec---CCeEEEEEcCCcccccee-cccCcceEEEEeCCCC--CceEEEeeCCCcE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGI---NGIIRVIDVSNEKLHKSF-VGHGDSINEIRTQPLK--PSLVVSASKDESV 78 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~~--~~~l~s~~~dg~i 78 (294)
+.|.+.|++++|+ |++..++++|+. ||.|++||+.+++..... .+|..+|++++|+|+. +.+|++|+.||.|
T Consensus 15 ~~h~~~v~~~~~~--p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 15 KGFNYTVFDCKWV--PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EECSSCEEEEEEC--TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred cCCCCceEEEEEc--CCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 4699999999998 888756777776 999999999988765443 3799999999999932 6999999999999
Q ss_pred EEEEcCCCc-eEEEeeccCCCCCceeEEEE------ecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 79 RLWNVQTGI-CILIFAGAGGHRNEVLSVDF------HPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 79 ~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~------~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
++||+.+++ .+..+. +|...|.++.| +| ++.+|++++.||.|++||++...
T Consensus 93 ~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~------------------ 150 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVK---GHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKD------------------ 150 (357)
T ss_dssp EEECTTSCSSCSEEEC---CCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCS------------------
T ss_pred EEEeCCCCCccEEEEE---ecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCC------------------
Confidence 999999888 777777 69999999965 56 78899999999999999999732
Q ss_pred ceeeeceEEeecCCC----ceeecc----e--ecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 152 KYVQFPVFIASVHSN----YVDCNR----W--LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~----~i~~~~----~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
.+...+..|.. .+.++. | +++++++++.|+.|++||+++++ . .....+...+.+++
T Consensus 151 ----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~-~~~~~~~~~v~~~~ 216 (357)
T 3i2n_A 151 ----DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA---------L-RWETNIKNGVCSLE 216 (357)
T ss_dssp ----SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE---------E-EEEEECSSCEEEEE
T ss_pred ----CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc---------e-eeecCCCCceEEEE
Confidence 12333333333 677777 3 38899999999999999998764 2 33355678899999
Q ss_pred Ecc---cCCcceEEEEcCCCeEEEEeccCCCceeeeec-cccccCCCeEEEEEccCCC-EEEEeccCCcEEEEecCC
Q 022590 222 FSC---DFHYNAAAIGNREGKIFVWELQSSPPVLIARL-SHAQSKSPIRQTAMSYDGS-TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 222 ~~~---~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~ 293 (294)
|+| ++ .++++++.||.|++||+++.+....... ....|...|++++|+|+++ +|++++.||.|++||++.
T Consensus 217 ~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 217 FDRKDISM--NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp ESCSSSSC--CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred cCCCCCCC--CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 999 66 6899999999999999987654332221 1236788999999999998 899999999999999863
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-39 Score=258.47 Aligned_cols=244 Identities=21% Similarity=0.273 Sum_probs=203.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG 86 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 86 (294)
|.+.|++++|+ |+++ +|++|+.||.|++|| .+++.+..+..|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 107 ~~~~v~~~~~s--~~~~-~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 107 TTNQVTCLAWS--HDGN-SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp -CBCEEEEEEC--TTSS-EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTT
T ss_pred CCCceEEEEEc--CCCC-EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCC
Confidence 68899999998 8998 999999999999999 67888889999999999999999 8899999999999999999887
Q ss_pred ceEEEeec-----------------------------------------------------cCCCCCceeEEEEecCCCc
Q 022590 87 ICILIFAG-----------------------------------------------------AGGHRNEVLSVDFHPSDIY 113 (294)
Q Consensus 87 ~~~~~~~~-----------------------------------------------------~~~~~~~v~~l~~~~~~~~ 113 (294)
+.+..+.. ...|...|.+++|+| ++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 260 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNK 260 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTT
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCC
Confidence 76654431 114666777777777 666
Q ss_pred eEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceec-ceEEEeeCCCeEEEecC
Q 022590 114 RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG-DFILSKSVDNEIVLWEP 192 (294)
Q Consensus 114 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~d~~i~iwd~ 192 (294)
+|++++.||.|++||++. ......+..|...|.++.|++ .++++++.|+.|++||+
T Consensus 261 ~l~~~~~d~~i~i~d~~~-----------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGN-----------------------GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSL 317 (425)
T ss_dssp EEEEEETTSCEEEECSSS-----------------------BSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEET
T ss_pred EEEEEcCCCEEEEEECCC-----------------------CccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEEC
Confidence 777777777788887776 334556677999999999982 39999999999999999
Q ss_pred CCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc------------------eeee
Q 022590 193 KMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP------------------VLIA 254 (294)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------------~~~~ 254 (294)
++++ .+..+..+...+.+++|+|++ .+|++++.||.|++||+++.+. ....
T Consensus 318 ~~~~---------~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (425)
T 1r5m_A 318 KQNT---------LLALSIVDGVPIFAGRISQDG--QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA 386 (425)
T ss_dssp TTTE---------EEEEEECTTCCEEEEEECTTS--SEEEEEETTSCEEEEECHHHHC--------------CEECCEEE
T ss_pred CCCc---------EeEecccCCccEEEEEEcCCC--CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh
Confidence 8654 567777888899999999998 6899999999999999987640 0223
Q ss_pred eccccccCC--CeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 255 RLSHAQSKS--PIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 255 ~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.+. .|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 387 ~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 387 SYQ--SSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEC--CTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhc--CcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 333 5544 89999999999999999999999999985
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.9e-40 Score=259.08 Aligned_cols=248 Identities=17% Similarity=0.253 Sum_probs=202.4
Q ss_pred cccccCceeEEEEEeecC-CCceEEEEeecCCeEEEEEcCCc-------cccceecccCcceEEEEeCCCCCceEEEeeC
Q 022590 3 YVDQKEESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNE-------KLHKSFVGHGDSINEIRTQPLKPSLVVSASK 74 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 74 (294)
.+..|.+.|++++|+ | +++ +|++|+.||.|++||+.++ +.+..+.+|...|++++|+|++..+|++++.
T Consensus 76 ~~~~h~~~V~~~~~~--p~~~~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWC--PHNDN-VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CBCCCSSCEEEEEEC--TTCTT-EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred eEecCCCCEEEEEeC--CCCCC-EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 356899999999998 7 777 9999999999999999887 5678889999999999999933479999999
Q ss_pred CCcEEEEEcCCCceEEEe--eccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCc
Q 022590 75 DESVRLWNVQTGICILIF--AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 152 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
||+|++||+.+++.+..+ . +|...|.+++|+| ++.+|++++.||.|++||+++.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-------------------- 208 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPD---VHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKG-------------------- 208 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTT---TCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTT--------------------
T ss_pred CCEEEEEECCCCCccEEEecC---CCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCC--------------------
Confidence 999999999999988887 4 6999999999999 8899999999999999999973
Q ss_pred eeeeceEEe-ecCCCc-eeeccee--cceEEEe---eCCCeEEEecCCCCCCCCCCCCceeeeee-ecCCCCeeEEEEcc
Q 022590 153 YVQFPVFIA-SVHSNY-VDCNRWL--GDFILSK---SVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSC 224 (294)
Q Consensus 153 ~~~~~~~~~-~~~~~~-i~~~~~~--~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 224 (294)
.....+ ..|... +.++.|+ +.+++++ +.|+.|++||+++.+. .+... ..+...+..++|+|
T Consensus 209 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~--------~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 209 ---TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE--------PLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp ---EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS--------CSEEEECCCCSSCEEEEEET
T ss_pred ---ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC--------CceEEeccCCCceeEEEEcC
Confidence 334444 567665 7888886 7788888 7899999999987653 11122 23556799999999
Q ss_pred cCCcceE-EEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 225 DFHYNAA-AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 225 ~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++. ++ ++|+.||.|++||+.+.++. ...+....+..+|.+++|+|++.++++ .++.+++|++.+
T Consensus 278 ~~~--~l~~~g~~dg~i~i~d~~~~~~~-~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 278 DTN--IVYLCGKGDSSIRYFEITSEAPF-LHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp TTT--EEEEEETTCSCEEEEEECSSTTC-EEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred CCC--EEEEEEcCCCeEEEEEecCCCcc-eEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 984 55 56778999999999988741 222221135688999999999998775 466899999864
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-40 Score=259.29 Aligned_cols=266 Identities=13% Similarity=0.091 Sum_probs=195.0
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc---ccceecccCcceEEEEeCCCCCceEEEeeCCCcEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVR 79 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 79 (294)
.+..|.+.|++++|+ |+++ +|++++.||.|++||+.+++ ....+.+|...|++++|+| ++++|++++.|+.|+
T Consensus 50 ~~~~h~~~v~~~~~s--~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWA--PKSN-RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVIS 125 (377)
T ss_dssp CBCCCSSCEEEEEEC--TTTC-CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEE
T ss_pred EEecCCceEEEEEEe--CCCC-EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEE
Confidence 456899999999998 8888 99999999999999999877 5667788999999999999 889999999999999
Q ss_pred EEEcCCCce---EEEeeccCC-CCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCC-Ccee
Q 022590 80 LWNVQTGIC---ILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFP-TKYV 154 (294)
Q Consensus 80 vwd~~~~~~---~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~ 154 (294)
+||+++++. ...+. + |...|.+++|+| ++.+|++++.|+.|++||++......... +.... ....
T Consensus 126 iwd~~~~~~~~~~~~~~---~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~ 195 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLK---RPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPE------ASVWGSRLPF 195 (377)
T ss_dssp ECCC-----CCCCEEEC---SSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCC------SCSSCSCCCE
T ss_pred EEEECCcccceeeeEee---cccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCcc------ccccccccch
Confidence 999998873 55555 4 999999999999 88999999999999999997532111100 00000 0011
Q ss_pred eeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEE
Q 022590 155 QFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 155 ~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
......+ .|...|.+++|+ +++|++++.|+.|++||+++++. ....+..+..|...+.+++|+|++ .+|+
T Consensus 196 ~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~--~~l~ 267 (377)
T 3dwl_C 196 NTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ-----PPRALITVKLSQLPLRSLLWANES--AIVA 267 (377)
T ss_dssp EEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS-----CEEECCCEECSSSCEEEEEEEETT--EEEE
T ss_pred hhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC-----cceeeEeecCCCCceEEEEEcCCC--CEEE
Confidence 2334444 899999999997 78999999999999999998763 222366777888999999999998 5888
Q ss_pred EEcCCCeEEEEeccCCCceeeee----------------------------------c--------------cccccCCC
Q 022590 233 IGNREGKIFVWELQSSPPVLIAR----------------------------------L--------------SHAQSKSP 264 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~----------------------------------~--------------~~~~~~~~ 264 (294)
+|+.++.+ +|+........... + ....|...
T Consensus 268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~ 346 (377)
T 3dwl_C 268 AGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNM 346 (377)
T ss_dssp EESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSC
T ss_pred EEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccce
Confidence 88766655 77665221000000 0 01138899
Q ss_pred eEEEEEccCC-C---EEEEeccCCcEEEEec
Q 022590 265 IRQTAMSYDG-S---TILSCCEDGAIWRWDA 291 (294)
Q Consensus 265 v~~~~~s~~~-~---~l~s~~~dg~i~vw~~ 291 (294)
|+++++.+.. . .|+||+.||.|++||+
T Consensus 347 i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 347 IATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred eEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 9999976644 3 6999999999999986
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.1e-39 Score=249.66 Aligned_cols=255 Identities=7% Similarity=0.014 Sum_probs=202.5
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc---ccceecccCcceEEEEeCCCCCc-eEEEeeCCCcEEE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVGHGDSINEIRTQPLKPS-LVVSASKDESVRL 80 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~i~v 80 (294)
+.|++.|++++|+ |+++ +|++++.||.|++|++.+++ ....+..|...|++++|+| +++ +|++|+.||.|++
T Consensus 8 ~~h~~~v~~~~~s--~~~~-~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 8 QAPKDYISDIKII--PSKS-LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEE--GGGT-EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEEc--CCCC-EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEE
Confidence 4899999999998 8888 99999999999999998877 3455668999999999999 788 9999999999999
Q ss_pred EEc-CCCceEEEeeccCC--CCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 81 WNV-QTGICILIFAGAGG--HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 81 wd~-~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
||+ .+++. ..+. + |...|.+++|+| +.+|++++.|+.|++||++........ ....+
T Consensus 84 wd~~~~~~~-~~~~---~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~--------------~~~~~ 143 (342)
T 1yfq_A 84 VDLIGSPSF-QALT---NNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIA--------------VKNLN 143 (342)
T ss_dssp ECSSSSSSE-EECB---SCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEE--------------EEESC
T ss_pred EEeccCCce-Eecc---ccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEccccccccccc--------------ccCCe
Confidence 999 87765 4444 6 999999999998 678999999999999999862110000 00011
Q ss_pred eEEeecCCCceeecceecceEEEeeCCCeEEEecCCC-CCCCCCCCCceeeeeeecCCCCeeEEEEcc-cCCcceEEEEc
Q 022590 158 VFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVPECDIWFIKFSC-DFHYNAAAIGN 235 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~~~ 235 (294)
...+. |...+.+++|+++.+++++.|+.|++||++. ... ........+...+.+++|+| ++ .++++++
T Consensus 144 ~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~i~~i~~~~~~~--~~l~~~~ 213 (342)
T 1yfq_A 144 SNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD-------NGTIEESGLKYQIRDVALLPKEQ--EGYACSS 213 (342)
T ss_dssp SSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTC-------CCEEEECSCSSCEEEEEECSGGG--CEEEEEE
T ss_pred eeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccc-------cceeeecCCCCceeEEEECCCCC--CEEEEEe
Confidence 11222 7888999999977799999999999999987 432 12233445667899999999 88 6899999
Q ss_pred CCCeEEEEeccCC------Cceeeeecccc-----ccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 236 REGKIFVWELQSS------PPVLIARLSHA-----QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 236 ~dg~i~i~d~~~~------~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.||.|++|+++.. +.......... .|..+|.+++|+|++++|++++.||.|++||+++
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 9999999999876 32222221100 2345999999999999999999999999999874
No 70
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-38 Score=253.51 Aligned_cols=253 Identities=12% Similarity=0.138 Sum_probs=205.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.+.|++++|+ |+++ +|++|+.||.|++||+.+++.+..+.+|...|++++|+| ++.+|++++.||+|++||+
T Consensus 135 ~~~h~~~v~~~~~~--~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 135 DQAHVSEITKLKFF--PSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp TTSSSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred cccccCccEEEEEC--CCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeEC
Confidence 45899999999998 8998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEE---------------------ecCCCceEEeeecCCcEEEEeccccccccccceee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDF---------------------HPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 142 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~---------------------~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 142 (294)
++++.+..+.....|...+.+++| +| ++.+|++|+.||.|++||++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~--------- 280 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKE--------- 280 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCC---------
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCc---------
Confidence 999998888754445555555555 66 78899999999999999998732
Q ss_pred cCCCCCCCCceeeeceEEeecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCee
Q 022590 143 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIW 218 (294)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 218 (294)
........|...|.+++|+ +. +|++++.||.|++||+++++. .+..+.. +...+.
T Consensus 281 -------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--------~~~~~~~~~~~~v~ 339 (420)
T 3vl1_A 281 -------------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC--------PVGEFLINEGTPIN 339 (420)
T ss_dssp -------------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--------CSEEEEESTTSCEE
T ss_pred -------------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--------chhhhhccCCCCce
Confidence 1222334688899999998 44 999999999999999997653 2444444 566777
Q ss_pred EEEEcccCCcceEEEEcCCCeEEEEeccCCCcee-eeec----cccccCCCeEEEEEccCCC---EEEEeccCCcEEEEe
Q 022590 219 FIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL-IARL----SHAQSKSPIRQTAMSYDGS---TILSCCEDGAIWRWD 290 (294)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~----~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~vw~ 290 (294)
.+.+ +++ .+|++++.||.|++|++...+... .... ....+...|.+++|+|+++ .|++++.+|.+.+|+
T Consensus 340 ~~~~-~~~--~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 340 NVYF-AAG--ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEE-ETT--EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred EEEe-CCC--CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 7755 455 589999999999999998743211 1100 1236678899999999999 777778899999999
Q ss_pred cCCC
Q 022590 291 AIPT 294 (294)
Q Consensus 291 ~~~~ 294 (294)
++.+
T Consensus 417 ~~~~ 420 (420)
T 3vl1_A 417 LSNP 420 (420)
T ss_dssp SCC-
T ss_pred ccCC
Confidence 9753
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-39 Score=261.08 Aligned_cols=251 Identities=10% Similarity=0.134 Sum_probs=198.2
Q ss_pred cccCceeEEEEEeecC-CCceEEEEeecCCeEEEEEcCC---ccccc-eec-ccCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 5 DQKEESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSN---EKLHK-SFV-GHGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~---~~~~~-~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
+.|.+.|++++|+ | +++ +|++|+.||.|++||+.+ +.... .+. .|..+|++++|+| ++.+|++|+.||+|
T Consensus 60 ~~h~~~V~~~~~s--~~~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAVS--PGETP-YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIP-NFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEEE--CSSSC-EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred cCCCCceEEEEEC--CCCCC-EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeC-CCCEEEEEeCCCEE
Confidence 6789999999998 8 888 999999999999999876 43221 222 5999999999999 88999999999999
Q ss_pred EEEEcC---CCceEEEeec-------cCC--CCCceeEEE--EecCCCceEEeeecCCcEEEEeccccccccccceeecC
Q 022590 79 RLWNVQ---TGICILIFAG-------AGG--HRNEVLSVD--FHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144 (294)
Q Consensus 79 ~vwd~~---~~~~~~~~~~-------~~~--~~~~v~~l~--~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 144 (294)
++||+. +++....+.. ... +...+.++. ++| ++.+|++++.||.|++||+++
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~------------- 201 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRT------------- 201 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTT-------------
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC-------------
Confidence 999995 5554443321 001 556677777 456 788999999999999999998
Q ss_pred CCCCCCCceeeeceEEeec--CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee-cCCCCeeE
Q 022590 145 LPSKFPTKYVQFPVFIASV--HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP-VPECDIWF 219 (294)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 219 (294)
...+..+.. |...|.+++|+ +++|++++.||.|++||+++++ .+..+. .+...|.+
T Consensus 202 ----------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 202 ----------LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV---------LIRSWSFGDHAPITH 262 (437)
T ss_dssp ----------CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE---------EEEEEBCTTCEEEEE
T ss_pred ----------CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc---------EEEEEecCCCCceEE
Confidence 344556666 88999999996 8899999999999999998654 455554 56678999
Q ss_pred EEEccc--CCcceEEEEcCCCeEEEEeccCCCceeeeec----------------------cccccCCCeEEEEEccCCC
Q 022590 220 IKFSCD--FHYNAAAIGNREGKIFVWELQSSPPVLIARL----------------------SHAQSKSPIRQTAMSYDGS 275 (294)
Q Consensus 220 ~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------~~~~~~~~v~~~~~s~~~~ 275 (294)
++++|. ..+.+|++|+.||.|++||+++++....... ....|...|++++|+ +++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 977764 2236899999999999999998764332221 001266789999999 779
Q ss_pred EEEEeccCCcEEEEecCC
Q 022590 276 TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 276 ~l~s~~~dg~i~vw~~~~ 293 (294)
+|++|+.||.|++||+++
T Consensus 342 ~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EEEEEGGGTEEEEEETTC
T ss_pred EEEecCCCCeEEEEECCC
Confidence 999999999999999864
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=250.04 Aligned_cols=249 Identities=16% Similarity=0.267 Sum_probs=198.7
Q ss_pred cccccCceeEEEEEeecCC---CceEEEEeecCCeEEEEEcCC-cccc-ceecccCcceEEEEeCCCCCceEEEeeCCCc
Q 022590 3 YVDQKEESFYTVSWACNVD---GIPFLVAGGINGIIRVIDVSN-EKLH-KSFVGHGDSINEIRTQPLKPSLVVSASKDES 77 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 77 (294)
.++.|.+.|++++|+ |+ |+ +|++|+.||.|++||+.+ ++.+ ..+.+|...|++++|+| ++++|++++.||.
T Consensus 34 ~~~~h~~~v~~~~~~--~~~~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFS--PPTLPGN-FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKT 109 (368)
T ss_dssp CSSCCSSCEEEEEEC--CTTSSSE-EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred eccCCCCceEEEEEc--CCCCCce-EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCc
Confidence 456899999999998 77 56 999999999999999987 5444 77889999999999999 8899999999999
Q ss_pred EEEEEcCCCceEEEeeccCCCCCceeEEEE--ecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 78 VRLWNVQTGICILIFAGAGGHRNEVLSVDF--HPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 78 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
|++||+.+++.+.... |...|.+++| +| ++.+|++++.||.|++||+++.
T Consensus 110 v~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~----------------------- 161 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQ----HDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSS----------------------- 161 (368)
T ss_dssp EEEEETTTTEEEEEEE----CSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCS-----------------------
T ss_pred EEEEEcCCCCceeecc----ccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCC-----------------------
Confidence 9999999998777544 9999999999 77 8889999999999999999973
Q ss_pred eceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCC--cceEEE
Q 022590 156 FPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH--YNAAAI 233 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~l~~ 233 (294)
.+...+..+ ..+.++.+.++.+++++.++.+++||++.... ...............+.+.++.. ...+++
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 162 NPMMVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLENQPS-------EFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp SCSEEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSSSCE-------EEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred cEEEEEecC-CCceEEEecCCeeEEEeCCCcEEEEEeccccc-------hhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 233444444 36777777788999999999999999986532 11111122334556666666552 234999
Q ss_pred EcCCCeEEEEeccCCCc-eeeeeccccccC------------CCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 234 GNREGKIFVWELQSSPP-VLIARLSHAQSK------------SPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~------------~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++.||.|++||++.... .....+. .|. .+|++++|+|++++|++|+.||.|++||+++
T Consensus 234 ~~~dg~i~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPNPAKDNFTFK--CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EETTSEEEEEESSCSCHHHHSEEEE--CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ecCCCcEEEEecCCCCccccceeee--eeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 99999999999988743 2222322 332 2799999999999999999999999999874
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7e-39 Score=256.67 Aligned_cols=239 Identities=25% Similarity=0.403 Sum_probs=203.5
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.+.|.+++| +++ +|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .++++|+.||.|++||+
T Consensus 169 ~~~h~~~v~~l~~----~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 169 LTGHTGSVLCLQY----DER-VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDM 240 (435)
T ss_dssp ECCCSSCEEEEEC----CSS-EEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEEC
T ss_pred EcCCCCcEEEEEE----CCC-EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeC
Confidence 4579999999998 466 999999999999999999999999999999999999976 58999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.+++.........+|...|.+++| ++.++++|+.||.|++||+++ ...+..+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~-----------------------~~~~~~~~~ 294 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTST-----------------------CEFVRTLNG 294 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTT-----------------------CCEEEEEEC
T ss_pred CCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCc-----------------------CcEEEEEcC
Confidence 988766433333379999999999 456899999999999999998 445667788
Q ss_pred CCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEE
Q 022590 164 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 243 (294)
Q Consensus 164 ~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~ 243 (294)
|...|.++.|+++++++++.||.|++||+++++ .+..+..|...+.+++| ++ .++++|+.||.|++|
T Consensus 295 ~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~~~~--~~--~~l~sg~~dg~i~vw 361 (435)
T 1p22_A 295 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRF--DN--KRIVSGAYDGKIKVW 361 (435)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEC--CS--SEEEEEETTSCEEEE
T ss_pred CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCC---------EEEEEeCCcCcEEEEEe--cC--CEEEEEeCCCcEEEE
Confidence 999999999999999999999999999999765 67778888999999998 44 589999999999999
Q ss_pred eccCCCce-------eeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 244 ELQSSPPV-------LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 244 d~~~~~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|+.+.+.. ....+. .|..+|.+++| ++++|++|+.||.|++||+.+
T Consensus 362 d~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 362 DLVAALDPRAPAGTLCLRTLV--EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EHHHHTSTTSCTTTTEEEEEC--CCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred ECCCCCCccccccchheeecc--CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 99765411 233333 78889999999 788999999999999999864
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=254.15 Aligned_cols=241 Identities=16% Similarity=0.251 Sum_probs=198.5
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEc----CCcc------ccceecc----------cCcceEEEEeCCCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV----SNEK------LHKSFVG----------HGDSINEIRTQPLK 65 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~----~~~~------~~~~~~~----------h~~~v~~~~~~~~~ 65 (294)
.|.++|++++|+ |+|+.+||+|+.||.|++|++ .+++ ....+.. |.+.|++++|+| +
T Consensus 43 ~~~~~v~~~~~s--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 119 (425)
T 1r5m_A 43 VKLDNIVSSTWN--PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-D 119 (425)
T ss_dssp EECSCCSEEEEC--SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT-T
T ss_pred eccCceEEEEEC--CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC-C
Confidence 466899999998 887658999999999999999 8877 3444443 688999999999 8
Q ss_pred CceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCC
Q 022590 66 PSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145 (294)
Q Consensus 66 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 145 (294)
+++|++++.||.|++|| .+++.+..+. +|...|.+++|+| ++.+|++++.||.|++||+++..
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~------------ 182 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLN---FHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGT------------ 182 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEEC---CCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTE------------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeecc---CCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCc------------
Confidence 99999999999999999 5777777777 6999999999999 88899999999999999998733
Q ss_pred CCCCCCceeeeceEEeecCCCc---------------eeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeee
Q 022590 146 PSKFPTKYVQFPVFIASVHSNY---------------VDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK 209 (294)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~---------------i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 209 (294)
....+..+... +.++.|+ +..+++++.++.|++||+++++ .+..
T Consensus 183 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~---------~~~~ 242 (425)
T 1r5m_A 183 -----------VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKT---------PTGK 242 (425)
T ss_dssp -----------EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSS---------CSEE
T ss_pred -----------EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCc---------eeee
Confidence 22233333333 8888887 7789999999999999998764 4556
Q ss_pred eecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEE
Q 022590 210 YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289 (294)
Q Consensus 210 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 289 (294)
+..+...+.+++|+|++ .+|++++.||.|++||+++.+... .+. .|...|.+++|+|++ +|++++.||.|++|
T Consensus 243 ~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~--~~~--~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTN--KLLLSASDDGTLRIWHGGNGNSQN--CFY--GHSQSIVSASWVGDD-KVISCSMDGSVRLW 315 (425)
T ss_dssp ECCCSSCEEEEEEETTT--TEEEEEETTSCEEEECSSSBSCSE--EEC--CCSSCEEEEEEETTT-EEEEEETTSEEEEE
T ss_pred eccCCCceEEEEECCCC--CEEEEEcCCCEEEEEECCCCccce--Eec--CCCccEEEEEECCCC-EEEEEeCCCcEEEE
Confidence 66788899999999998 589999999999999999876433 333 677899999999999 99999999999999
Q ss_pred ecCC
Q 022590 290 DAIP 293 (294)
Q Consensus 290 ~~~~ 293 (294)
|+++
T Consensus 316 d~~~ 319 (425)
T 1r5m_A 316 SLKQ 319 (425)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9864
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=240.60 Aligned_cols=246 Identities=20% Similarity=0.341 Sum_probs=201.1
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
..|...|++++|+ |+|+ +|++|+.||+|++|++.+++.+..+.+|...+.++.+.+ .++++++.++.+++|+..
T Consensus 64 ~~~~~~V~~v~~~--~~~~-~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 64 EQPGEYISSVAWI--KEGN-YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp CSTTCCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETT
T ss_pred cCCCCeEEEEEEC--CCCC-EEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecC
Confidence 4788899999998 9998 999999999999999999999999999999998877754 789999999999999998
Q ss_pred CCce-EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 85 TGIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 85 ~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.... +..+. +|...+..+.+.+ ++.+|++++.||.|++||+++.... .........
T Consensus 138 ~~~~~~~~~~---~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~-------------------~~~~~~~~~ 194 (318)
T 4ggc_A 138 VAEHHVATLS---GHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGG-------------------WVPLQTFTQ 194 (318)
T ss_dssp SSSCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTB-------------------SCCSEEECC
T ss_pred CCceeEEEEc---CccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCccc-------------------ccceeeecc
Confidence 7644 44455 6999999999999 8899999999999999999874321 122344556
Q ss_pred CCCceeeccee---cce--EEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 164 HSNYVDCNRWL---GDF--ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 164 ~~~~i~~~~~~---~~~--l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
+...|.++.+. ++. +++++.++.|++||.+... ......+...+..+.|+|.+...++++|+.|+
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~----------~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----------CLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC----------EEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc----------ccccccceeeeeeeeecccccceEEEEEcCCC
Confidence 77778888775 333 3567788999999998654 22334456779999999998643344466899
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++||+++++. ...+. +|..+|++++|+|+|++|+||+.||+|+|||+.+
T Consensus 265 ~i~iwd~~~~~~--~~~l~--gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 265 QLVIWKYPTMAK--VAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CEEEEETTTCCE--EEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEECCCCcE--EEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 999999998874 44444 7889999999999999999999999999999864
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-38 Score=283.84 Aligned_cols=253 Identities=20% Similarity=0.315 Sum_probs=216.9
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|.+.|++++|+ |+|+ ++++|+.||.|++||+.+++.+..+.+|...|++++|+| ++++|++++.||+|++||+
T Consensus 611 ~~~h~~~v~~~~~s--~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 611 VRPHTDAVYHACFS--QDGQ-RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred EecccccEEEEEEC--CCCC-EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEEC
Confidence 34799999999998 9998 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecC-CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
.+++.+..+. +|...|.+++|+|. +..++++|+.|+.|++||+++ ......+.
T Consensus 687 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----------------------~~~~~~~~ 740 (1249)
T 3sfz_A 687 ATGKLVHTYD---EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----------------------KECRNTMF 740 (1249)
T ss_dssp TTCCEEEEEE---CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----------------------SSEEEEEC
T ss_pred CCCceEEEEc---CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----------------------cchhheec
Confidence 9999999988 69999999999984 345789999999999999998 44566778
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCC---------------------------------------
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE--------------------------------------- 201 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~--------------------------------------- 201 (294)
+|...|.+++|+ ++++++++.||.|++||+++++.....
T Consensus 741 ~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 899999999997 789999999999999999765321000
Q ss_pred ------CCceeeeee-ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC
Q 022590 202 ------GTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274 (294)
Q Consensus 202 ------~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (294)
......... ..+...+.+++|+|++ .++++++.+|.|++||+.++. ....+. +|...|.+++|+|++
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~v~vwd~~~~~--~~~~~~--~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--HLAVIALSQYCVELWNIDSRL--KVADCR--GHLSWVHGVMFSPDG 894 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSSCCCEEEECSST--TEEEEECSSSCEEEEETTTTE--EEEEEC--CCSSCEEEEEECTTS
T ss_pred EEEEEecCCCceeEEcCCCCCceEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCc--eeeecC--CCccceEEEEECCCC
Confidence 000111112 2567789999999998 689999999999999999875 333343 788999999999999
Q ss_pred CEEEEeccCCcEEEEecC
Q 022590 275 STILSCCEDGAIWRWDAI 292 (294)
Q Consensus 275 ~~l~s~~~dg~i~vw~~~ 292 (294)
++|++++.||.|++|++.
T Consensus 895 ~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 895 SSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp SEEEEEETTSCEEEEEHH
T ss_pred CEEEEEeCCCeEEEEEcc
Confidence 999999999999999964
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-38 Score=242.81 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=201.8
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.+..|.+.|++++| |+++ +|++|+.||.|++||+.+++....+..|...|.+++|+| ++.+|++++.||.|++|+
T Consensus 13 ~l~~h~~~v~~~~~---~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 13 TLKGHDQDVRDVVA---VDDS-KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EECCCSSCEEEEEE---EETT-EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred HhhCCCCCcEEEEe---cCCC-EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEE
Confidence 35689999999999 5677 899999999999999999998999999999999999999 899999999999999999
Q ss_pred cCCC---ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 83 VQTG---ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 83 ~~~~---~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
+... +.+..+. +|...|.+++|. +.++++++.||.|++||.. ....
T Consensus 88 ~~~~~~~~~~~~~~---~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d~~-------------------------~~~~ 136 (313)
T 3odt_A 88 LFATSGEDPLYTLI---GHQGNVCSLSFQ---DGVVISGSWDKTAKVWKEG-------------------------SLVY 136 (313)
T ss_dssp TTCCTTSCC-CEEC---CCSSCEEEEEEE---TTEEEEEETTSEEEEEETT-------------------------EEEE
T ss_pred eeecCCCCcccchh---hcccCEEEEEec---CCEEEEEeCCCCEEEEcCC-------------------------cEEE
Confidence 8765 4445555 799999999994 4589999999999999922 3456
Q ss_pred EeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCeeEEEEcccCCcceEEEEc
Q 022590 160 IASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKFSCDFHYNAAAIGN 235 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~ 235 (294)
.+..|...+.++.|. ++++++++.|+.|++||... ....+.. +...+.+++|+|++ . +++++
T Consensus 137 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----------~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~ 202 (313)
T 3odt_A 137 NLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-----------VIKTFSGIHNDVVRHLAVVDDG--H-FISCS 202 (313)
T ss_dssp EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-----------EEEEECSSCSSCEEEEEEEETT--E-EEEEE
T ss_pred ecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-----------eEEEEeccCcccEEEEEEcCCC--e-EEEcc
Confidence 677899999999884 78999999999999999432 3445555 78889999999998 3 89999
Q ss_pred CCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 236 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 236 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.||.|++||+++.+.. ..+. .|..+|++++|+|++ .|++++.||.|++||+++
T Consensus 203 ~dg~i~i~d~~~~~~~--~~~~--~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVL--RTYE--GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp TTSEEEEEETTTCCEE--EEEE--CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred CCCeEEEEECCchhhh--hhhh--cCCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 9999999999988643 3333 677899999999999 689999999999999865
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-38 Score=251.80 Aligned_cols=240 Identities=18% Similarity=0.302 Sum_probs=196.0
Q ss_pred EEEEEeecCCCceEEEEeecCCeEEEEEcCCc----cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC-
Q 022590 12 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG- 86 (294)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~- 86 (294)
..++++ |+...++++++.||.|+||++.+. +....+.+|.+.|++++|+|.++++|++|+.||+|++||+.++
T Consensus 38 ~~~~~~--~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 38 GFCAVN--PKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp CSEEEC--SSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CcEEEC--CCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 345554 776545556899999999998654 3455678999999999999977889999999999999999987
Q ss_pred ------ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 87 ------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 87 ------~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
+.+..+. +|...|.+++|+|++..+|++++.||.|++||+++ ......
T Consensus 116 ~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-----------------------~~~~~~ 169 (402)
T 2aq5_A 116 LVLPLREPVITLE---GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-----------------------GAAVLT 169 (402)
T ss_dssp CSSCBCSCSEEEE---CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-----------------------TEEEEE
T ss_pred CccccCCceEEec---CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-----------------------CCccEE
Confidence 5566676 79999999999994347999999999999999997 334555
Q ss_pred e--ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-ecCCCC-eeEEEEcccCCcceEEEE
Q 022590 161 A--SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECD-IWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 161 ~--~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~~l~~~ 234 (294)
+ ..|...|.+++|+ +++|++++.|+.|++||+++++ .+..+ ..+... +..+.|+|++ .++++|
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g 238 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT---------VVAEKDRPHEGTRPVHAVFVSEG--KILTTG 238 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---------EEEEEECSSCSSSCCEEEECSTT--EEEEEE
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc---------eeeeeccCCCCCcceEEEEcCCC--cEEEEe
Confidence 5 6799999999997 8899999999999999998764 45555 455554 8899999998 688888
Q ss_pred ---cCCCeEEEEeccCCCc-eeeeeccccccCCCeEEEEEccCCCEEE-EeccCCcEEEEecCC
Q 022590 235 ---NREGKIFVWELQSSPP-VLIARLSHAQSKSPIRQTAMSYDGSTIL-SCCEDGAIWRWDAIP 293 (294)
Q Consensus 235 ---~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~dg~i~vw~~~~ 293 (294)
+.|+.|++||+++.+. ...... .+...+.+++|+|++++|+ +|+.||.|++||+.+
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQEL---DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEEC---CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred ccCCCCceEEEEcCccccCCceEEec---cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 7999999999988754 222222 4557799999999999996 566899999999875
No 79
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.7e-38 Score=250.31 Aligned_cols=234 Identities=21% Similarity=0.381 Sum_probs=203.9
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
+|...|+++++ +++ ++++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||+|++||+.+
T Consensus 131 ~~~~~v~~~~~----d~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 131 ETSKGVYCLQY----DDQ-KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SSCCCEEEEEC----CSS-EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSS
T ss_pred CCCCcEEEEEE----CCC-EEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCC
Confidence 56677888876 577 9999999999999999999999999999999999999 457999999999999999999
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
++.+..+. +|...|.+++|++ .++++|+.||.|++||++.... ........+|.
T Consensus 203 ~~~~~~~~---~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~--------------------~~~~~~~~~~~ 256 (435)
T 1p22_A 203 GEMLNTLI---HHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTD--------------------ITLRRVLVGHR 256 (435)
T ss_dssp CCEEEEEC---CCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSC--------------------CEEEEEECCCS
T ss_pred CcEEEEEc---CCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCC--------------------ceeeeEecCCC
Confidence 99988887 6999999999975 4899999999999999987321 11235667899
Q ss_pred CceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 166 NYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 166 ~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
..|.++.|+++++++++.||.|++||+++++ .+..+..+...+.++.+. + .++++|+.||.|++||+
T Consensus 257 ~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~---------~~~~~~~~~~~v~~~~~~--~--~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 257 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCE---------FVRTLNGHKRGIACLQYR--D--RLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEEE--T--TEEEEEETTSCEEEEET
T ss_pred CcEEEEEeCCCEEEEEeCCCeEEEEECCcCc---------EEEEEcCCCCcEEEEEeC--C--CEEEEEeCCCeEEEEEC
Confidence 9999999999999999999999999998765 677788888999999884 3 58999999999999999
Q ss_pred cCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 246 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
++++. ...+. .|...|.+++| ++++|++|+.||.|++||++
T Consensus 324 ~~~~~--~~~~~--~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 324 ECGAC--LRVLE--GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp TTCCE--EEEEC--CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred CCCCE--EEEEe--CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 98863 33444 67889999999 78899999999999999974
No 80
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-37 Score=236.24 Aligned_cols=237 Identities=16% Similarity=0.253 Sum_probs=201.8
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc---cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE---KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
+..|...|.+++|+ |+++ +|++++.||.|++|++.+. +....+.+|...|.+++|. +++|++++.||.|++
T Consensus 55 ~~~~~~~v~~~~~~--~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~ 128 (313)
T 3odt_A 55 VYTGQGFLNSVCYD--SEKE-LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKV 128 (313)
T ss_dssp EEECSSCEEEEEEE--TTTT-EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEE
T ss_pred eecCCccEEEEEEC--CCCC-EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEE
Confidence 34788999999998 8998 9999999999999998654 5677888999999999994 468999999999999
Q ss_pred EEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 81 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
|| .++....+. .|...+.+++|.|.++.++++++.||.|++||... ....
T Consensus 129 ~d--~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-------------------------~~~~ 178 (313)
T 3odt_A 129 WK--EGSLVYNLQ---AHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-------------------------VIKT 178 (313)
T ss_dssp EE--TTEEEEEEE---CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-------------------------EEEE
T ss_pred Ec--CCcEEEecc---cCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-------------------------eEEE
Confidence 99 667777777 69999999999987788999999999999999543 2334
Q ss_pred eec-CCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 161 ASV-HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 161 ~~~-~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
+.. |...+.++.|+ ...+++++.|+.|++||+++++ .+..+..+...+.+++|+|++ .+++++.||
T Consensus 179 ~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~---~l~~~~~dg 246 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD---------VLRTYEGHESFVYCIKLLPNG---DIVSCGEDR 246 (313)
T ss_dssp ECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEECTTS---CEEEEETTS
T ss_pred EeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh---------hhhhhhcCCceEEEEEEecCC---CEEEEecCC
Confidence 444 88999999997 4459999999999999998765 677788899999999999998 488999999
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++||+++++... .+. .|..+|.+++|+|+++ +++++.||.|++||+++
T Consensus 247 ~v~iwd~~~~~~~~--~~~--~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 247 TVRIWSKENGSLKQ--VIT--LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEEECTTTCCEEE--EEE--CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred EEEEEECCCCceeE--EEe--ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 99999999987433 333 5667899999999998 66788999999999874
No 81
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.7e-38 Score=241.17 Aligned_cols=209 Identities=21% Similarity=0.275 Sum_probs=178.6
Q ss_pred cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC-----ceEEEeeccCCCCCceeEEEEecCCCceEEee
Q 022590 44 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG-----ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 118 (294)
Q Consensus 44 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~ 118 (294)
.+..++.+|.++|++++|+|.++++|++|+.|++|++|++... ..+..+. +|...|.+++|+| ++.+|++|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~-dg~~l~s~ 83 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK---GHSHIVQDCTLTA-DGAYALSA 83 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE---CCSSCEEEEEECT-TSSEEEEE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe---CCcccEEEEEECC-CCCEEEEE
Confidence 3456788999999999999955689999999999999998643 3345555 7999999999999 89999999
Q ss_pred ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCC
Q 022590 119 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 196 (294)
Q Consensus 119 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~ 196 (294)
+.|++|++||+++ ......+.+|...|.+++|+ +.++++++.|+.|++||++..
T Consensus 84 s~D~~v~~wd~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~- 139 (319)
T 3frx_A 84 SWDKTLRLWDVAT-----------------------GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ- 139 (319)
T ss_dssp ETTSEEEEEETTT-----------------------TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-
T ss_pred eCCCEEEEEECCC-----------------------CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-
Confidence 9999999999998 44566788999999999997 789999999999999999642
Q ss_pred CCCCCCCceeeeeeecCCCCeeEEEEcccCC----cceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEcc
Q 022590 197 QSPGEGTADILQKYPVPECDIWFIKFSCDFH----YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY 272 (294)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 272 (294)
.+..+..|...+..+.+.|... ...+++++.|+.|++||+++.+ ....+. +|..+|.+++|+|
T Consensus 140 ---------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~--~h~~~v~~~~~sp 206 (319)
T 3frx_A 140 ---------CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI--GHNSNINTLTASP 206 (319)
T ss_dssp ---------EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC--CCCSCEEEEEECT
T ss_pred ---------eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec--CCCCcEEEEEEcC
Confidence 4667778889999999998642 2489999999999999998865 333333 7889999999999
Q ss_pred CCCEEEEeccCCcEEEEecCC
Q 022590 273 DGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 273 ~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++++|++|+.||.|++||+++
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEECCC
Confidence 999999999999999999864
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-37 Score=245.94 Aligned_cols=241 Identities=14% Similarity=0.162 Sum_probs=201.2
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-cCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
.|...++..++++++ . .+++++.||.|++||+.+++....+.. |...|++++|+| ++.+|++|+.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~--~-~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--L-NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECT--T-SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecC--C-CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECc
Confidence 444444443444334 3 477888999999999999988777765 889999999999 88999999999999999999
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
+++.+..+. +|...|.+++|++ .+|++++.||.|++||++.. ......+..|
T Consensus 165 ~~~~~~~~~---~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~----------------------~~~~~~~~~~ 216 (401)
T 4aez_A 165 SQTKLRTMA---GHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIA----------------------NHQIGTLQGH 216 (401)
T ss_dssp TCCEEEEEC---CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSS----------------------SCEEEEEECC
T ss_pred CCeEEEEec---CCCCceEEEEECC---CEEEEEcCCCCEEEEecccC----------------------cceeeEEcCC
Confidence 999988887 6999999999954 68999999999999999852 2345667889
Q ss_pred CCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc--CCCeE
Q 022590 165 SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN--REGKI 240 (294)
Q Consensus 165 ~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~--~dg~i 240 (294)
...|.++.|+ +++|++++.|+.|++||+++++ ....+..+...+.+++|+|++. .++++++ .|+.|
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---------~~~~~~~~~~~v~~~~~~p~~~-~ll~~~~gs~d~~i 286 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI---------PKFTKTNHNAAVKAVAWCPWQS-NLLATGGGTMDKQI 286 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS---------EEEEECCCSSCCCEEEECTTST-TEEEEECCTTTCEE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC---------ccEEecCCcceEEEEEECCCCC-CEEEEecCCCCCEE
Confidence 9999999997 7899999999999999998754 5666777889999999999886 5777765 79999
Q ss_pred EEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEE--eccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS--CCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~~~dg~i~vw~~~~ 293 (294)
++||+.+++.... + .+...|.+++|+|++++|++ |+.||.|++||+.+
T Consensus 287 ~i~d~~~~~~~~~--~---~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 287 HFWNAATGARVNT--V---DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEETTTCCEEEE--E---ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EEEECCCCCEEEE--E---eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 9999998864333 3 23467999999999999999 55899999999864
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.8e-37 Score=249.50 Aligned_cols=241 Identities=16% Similarity=0.280 Sum_probs=204.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCC-CCCceEEEeeCCCcEEEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP-LKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd 82 (294)
+..|.+.|++++|+ |++ ++++|+.||+|++||+.+++.+..+.+|...|.+++|++ .++.++++|+.||+|++||
T Consensus 158 ~~~h~~~V~~l~~~--~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 158 LSGHDGGVWALKYA--HGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp ECCCSSCEEEEEEC--STT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EeCCCcCEEEEEEc--CCC--EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 45799999999997 666 799999999999999999999999999999999999984 2678999999999999999
Q ss_pred cCCCceEEE--------------------eeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceee
Q 022590 83 VQTGICILI--------------------FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 142 (294)
Q Consensus 83 ~~~~~~~~~--------------------~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 142 (294)
+.++..... .....+|...+.++. + ++.++++++.||.|++||+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~----------- 299 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQ----------- 299 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTT-----------
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCC-----------
Confidence 987753321 112226888888874 5 678899999999999999987
Q ss_pred cCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEE
Q 022590 143 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 220 (294)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 220 (294)
...+..+..|...|.++.|+ ++++++++.||.|++||+++++ .+..+..|...+.++
T Consensus 300 ------------~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---------~~~~~~~h~~~v~~~ 358 (464)
T 3v7d_B 300 ------------MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE---------LMYTLQGHTALVGLL 358 (464)
T ss_dssp ------------TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEEEE
T ss_pred ------------CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc---------EEEEEeCCCCcEEEE
Confidence 44566778899999999997 7799999999999999998764 677888899999999
Q ss_pred EEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 221 KFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 221 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|++ .++++++.||.|++||+++.+.... . .+...+..++|+|++++|++|+ ||.|++||+++
T Consensus 359 ~~~~----~~l~s~s~dg~v~vwd~~~~~~~~~--~---~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 359 RLSD----KFLVSAAADGSIRGWDANDYSRKFS--Y---HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp EECS----SEEEEEETTSEEEEEETTTCCEEEE--E---ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTT
T ss_pred EEcC----CEEEEEeCCCcEEEEECCCCceeee--e---cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCC
Confidence 9973 4899999999999999998763322 2 3446788899999999999998 89999999875
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-37 Score=236.04 Aligned_cols=215 Identities=18% Similarity=0.226 Sum_probs=175.7
Q ss_pred ceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC--ceEEEeeccCCCCCceeEEEEecC-CCceEEeeecCCc
Q 022590 47 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG--ICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNT 123 (294)
Q Consensus 47 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~dg~ 123 (294)
..+.+|.+.|++++|+| ++++|++|+.|++|++||+..+ +.+..+. +|.++|.+++|+|. ++.+|++|+.|++
T Consensus 3 ~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~---gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp EECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEc---cccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 45678999999999999 8999999999999999999743 5566666 79999999999862 3789999999999
Q ss_pred EEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCCCCCCC
Q 022590 124 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSP 199 (294)
Q Consensus 124 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~ 199 (294)
|++||++... ......+..|...|.+++|+ +.+|++++.|+.|++||++.....
T Consensus 79 v~iWd~~~~~---------------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~- 136 (297)
T 2pm7_B 79 VMIWKEENGR---------------------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT- 136 (297)
T ss_dssp EEEEEBSSSC---------------------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-
T ss_pred EEEEEcCCCc---------------------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-
Confidence 9999998631 12344567799999999996 568999999999999999865321
Q ss_pred CCCCceeeeeeecCCCCeeEEEEcccCC-----------cceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEE
Q 022590 200 GEGTADILQKYPVPECDIWFIKFSCDFH-----------YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT 268 (294)
Q Consensus 200 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~ 268 (294)
....+..|...+.+++|+|+.. ..+|++|+.|+.|++||+++.+..........+|...|.++
T Consensus 137 ------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 137 ------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp ------CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ------eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 1245667888999999999731 25899999999999999988753322222234888999999
Q ss_pred EEccCC---CEEEEeccCCcEEEEecCC
Q 022590 269 AMSYDG---STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 269 ~~s~~~---~~l~s~~~dg~i~vw~~~~ 293 (294)
+|+|++ ++|++++.|+.|++||+++
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 999985 8999999999999999864
No 85
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.2e-37 Score=246.17 Aligned_cols=265 Identities=16% Similarity=0.280 Sum_probs=191.3
Q ss_pred cccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 3 YVDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
.+..|.+.|.+++|+ ++ ++++|+.||.|++||+.+++.+..+.+|...|.+++|++ +.+++|+.||+|++||
T Consensus 154 ~~~~h~~~v~~~~~~----~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR----DN-IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWD 225 (445)
T ss_dssp ECCCCSSCEEEEEEE----TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEE
T ss_pred EEcCCCCCEEEEEec----CC-EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEE
Confidence 345677777888877 33 677777788888888777777777777777777777754 5677777777777887
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccc--------eeecCC-------CC
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS--------FTWTDL-------PS 147 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--------~~~~~~-------~~ 147 (294)
+.+++.+..+. +|...|.+++| ++.++++|+.||.|++||+++........ +.+.+. ..
T Consensus 226 ~~~~~~~~~~~---~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~ 299 (445)
T 2ovr_B 226 IETGQCLHVLM---GHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 299 (445)
T ss_dssp SSSCCEEEEEE---CCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTS
T ss_pred CCCCcEEEEEc---CCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCC
Confidence 77777777777 57777777777 34567777777777777776643221110 011000 00
Q ss_pred CC--CCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec---CCCCeeEEEE
Q 022590 148 KF--PTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV---PECDIWFIKF 222 (294)
Q Consensus 148 ~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 222 (294)
.. -..........+..|...+.++.++++++++++.||.|++||+++++ .+..+.. +...+.+++|
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ---------CLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCC---------EEEEECSTTSCSSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCc---------EEEEEccCCCCCCCEEEEEE
Confidence 00 00000233556677888899999999999999999999999998664 4555554 6788999998
Q ss_pred cccCCcceEEEEcCCCeEEEEeccCCCceeeee-ccccccCCCeEEEEEccCCCEEEEeccCCc----EEEEecCCC
Q 022590 223 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIAR-LSHAQSKSPIRQTAMSYDGSTILSCCEDGA----IWRWDAIPT 294 (294)
Q Consensus 223 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~----i~vw~~~~~ 294 (294)
+ + .++++|+.||.|++||+.+++...... .....+.+.|.+++|+|++.+|++|+.||. |.+||++.+
T Consensus 371 ~--~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 371 N--K--NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp C--S--SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred C--C--CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 5 3 589999999999999999987543332 223467789999999999999999999998 999999753
No 86
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.2e-39 Score=252.34 Aligned_cols=261 Identities=17% Similarity=0.135 Sum_probs=177.3
Q ss_pred CCCceEEEEeecCCeEEEEEcCCccc-----cceecccCcceEEEEeCC-------CCCceEEEeeCCCcEEEEEcCCCc
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEKL-----HKSFVGHGDSINEIRTQP-------LKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~h~~~v~~~~~~~-------~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
+++. +|++++.|++|+|||..+++. +..+.+|.+.|++++|+| .++++||+|+.|++|+|||+.++.
T Consensus 99 ~~~~-~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 99 VYSL-FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp EEEE-EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCC-EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 3444 899999999999999988754 345789999999999986 257899999999999999998887
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce---eeeceEEeecC
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY---VQFPVFIASVH 164 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 164 (294)
.+..+. +|..+|.+++|+|.+..+|++++.|++|++||+++................. .... .........+|
T Consensus 178 ~~~~~~---~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 178 PILAGY---PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW-LLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp EEEEEE---ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCC-SEEEESGGGC------CC
T ss_pred eeeeec---CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccce-EEecccccceeeeecccc
Confidence 777666 5999999999999555789999999999999998754332221111000000 0000 00112234578
Q ss_pred CCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCC----------CceeeeeeecCCCCeeEEEEcccCCcceE
Q 022590 165 SNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEG----------TADILQKYPVPECDIWFIKFSCDFHYNAA 231 (294)
Q Consensus 165 ~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 231 (294)
...+.++.|. +..+++++.|+.+++||+.......... ............. .....+.|.....++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFA 332 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC-SSCCEECSSCTTEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-ceeEEEccCCCCEEE
Confidence 8889999885 7899999999999999998764321110 0001111111122 223445554444678
Q ss_pred EEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 232 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 232 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
++|+.||.|++||+.+++..... . .|..+|++++|+|||++||+++.+| +.+|.+
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~--~--~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIP--I--QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEE--E--ECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEe--c--CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 88999999999999988643322 2 5667999999999999999998877 555554
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-36 Score=243.45 Aligned_cols=256 Identities=18% Similarity=0.334 Sum_probs=206.8
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG 86 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 86 (294)
....+.++++. |+ +|++|+.||.|++||+.+++.+..+.+|...|.+++|++ +++++|+.||+|++||+.++
T Consensus 118 ~~~v~~~~~~~----g~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 118 DDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp TTSCEEEEEEE----TT-EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTT
T ss_pred CCCcEEEEEEc----CC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcC
Confidence 45668899999 56 899999999999999999999999999999999999999 48999999999999999999
Q ss_pred ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecccccccccc--------ceeecCCCC----CCC----
Q 022590 87 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK--------SFTWTDLPS----KFP---- 150 (294)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~--------~~~~~~~~~----~~~---- 150 (294)
+.+..+. +|...|.++.|++ ..+++|+.||.|++||+++....... .+.+.+... ...
T Consensus 190 ~~~~~~~---~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 190 ECIHTLY---GHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp EEEEEEC---CCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred cEEEEEC---CCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEE
Confidence 9999999 6999999999964 56999999999999999875432211 111100000 000
Q ss_pred -CceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcc
Q 022590 151 -TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 151 -~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (294)
..........+..|...|.++.|++.++++++.|+.|++||+++++ .+..+..+...+.++.+. + .
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~--~--~ 330 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN---------CIHTLTGHQSLTSGMELK--D--N 330 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCC---------EEEEECCCCSCEEEEEEE--T--T
T ss_pred EECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCC---------EEEEEcCCcccEEEEEEe--C--C
Confidence 0001233556678999999999999999999999999999998765 566777788888877764 4 4
Q ss_pred eEEEEcCCCeEEEEeccCCCceeeeecc-ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 230 AAAIGNREGKIFVWELQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++++|+.||.|++||+++++.. ..+. ...|..+|.+++|+ +++|++|+.||.|++||+++
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCL--QTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEE--EEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCCcEE--EEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCC
Confidence 8999999999999999988643 3333 23477899999996 57999999999999999875
No 88
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-37 Score=245.21 Aligned_cols=227 Identities=16% Similarity=0.245 Sum_probs=187.5
Q ss_pred CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCC
Q 022590 33 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 112 (294)
Q Consensus 33 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 112 (294)
..+..|+..+....+++.+|.++|++++|+| ++++|++|+.||+|++||+.+++....+. .|...|.+++|+| ++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~---~h~~~v~~~~~s~-~g 120 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIK---LHCPWVMECAFAP-NG 120 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEE---CCCTTCCCCEECT-TS
T ss_pred ccccccccceeEEeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEe---cCCCCEEEEEECC-CC
Confidence 3455677777778889999999999999999 88999999999999999999999988888 6999999999999 89
Q ss_pred ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEE
Q 022590 113 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVL 189 (294)
Q Consensus 113 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~i 189 (294)
.+|++|+.|+.+++||+....... ........+.+|...+.++.|. +..|++++.|+.|++
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~----------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~ 184 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRD----------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVL 184 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCC----------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEE
T ss_pred CEEEEeeCCCcEEEEECCCCcccc----------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEE
Confidence 999999999999999997621100 0011234567899999999996 457999999999999
Q ss_pred ecCCCCCCCCCCCCceeeeee-----ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCC
Q 022590 190 WEPKMKEQSPGEGTADILQKY-----PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSP 264 (294)
Q Consensus 190 wd~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 264 (294)
||+++++ .+..+ ..|...+.++.|++... .++++|+.||.|++||++.... ....+. +|...
T Consensus 185 wd~~~~~---------~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~sgs~D~~v~~wd~~~~~~-~~~~~~--~h~~~ 251 (380)
T 3iz6_a 185 WDVTTGQ---------RISIFGSEFPSGHTADVLSLSINSLNA-NMFISGSCDTTVRLWDLRITSR-AVRTYH--GHEGD 251 (380)
T ss_dssp ECTTTCC---------EEEEECCCSSSSCCSCEEEEEECSSSC-CEEEEEETTSCEEEEETTTTCC-CCEEEC--CCSSC
T ss_pred EEcCCCc---------EEEEeecccCCCCccCeEEEEeecCCC-CEEEEEECCCeEEEEECCCCCc-ceEEEC--CcCCC
Confidence 9999775 23333 45778899999987432 6999999999999999985422 223333 78899
Q ss_pred eEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 265 IRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 265 v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|++++|+|++++|++|+.||.|++||+++
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 99999999999999999999999999874
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-37 Score=249.05 Aligned_cols=244 Identities=11% Similarity=0.097 Sum_probs=192.6
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcC---Cccccceecc------------cCcceEEEE--eCCCCCce
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS---NEKLHKSFVG------------HGDSINEIR--TQPLKPSL 68 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~~~~~~~------------h~~~v~~~~--~~~~~~~~ 68 (294)
.|..+|++++|+ |+++ +|++|+.||.|++||+. +++....+.. +...+.++. +++ ++.+
T Consensus 109 ~h~~~v~~~~~~--~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 184 (437)
T 3gre_A 109 DCSSTVTQITMI--PNFD-AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSL 184 (437)
T ss_dssp ECSSCEEEEEEC--TTSS-EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEE
T ss_pred cCCCCEEEEEEe--CCCC-EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCE
Confidence 689999999998 8888 99999999999999995 5554443332 344556665 456 7889
Q ss_pred EEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCC
Q 022590 69 VVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 69 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
|++|+.||.|++||+++++.+..+... .|...|++++|+| ++.+|++|+.||.|++||++.
T Consensus 185 l~~~~~d~~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~----------------- 245 (437)
T 3gre_A 185 LVALTNLSRVIIFDIRTLERLQIIENS-PRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRF----------------- 245 (437)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC-GGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTT-----------------
T ss_pred EEEEeCCCeEEEEeCCCCeeeEEEccC-CCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCC-----------------
Confidence 999999999999999999999888721 1789999999999 899999999999999999997
Q ss_pred CCCceeeeceEEee-cCCCceeeccee------cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee----------
Q 022590 149 FPTKYVQFPVFIAS-VHSNYVDCNRWL------GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP---------- 211 (294)
Q Consensus 149 ~~~~~~~~~~~~~~-~~~~~i~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---------- 211 (294)
..++..+. .|...|.++.|+ +.+|++++.|+.|++||+++++. +..+.
T Consensus 246 ------~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~---------~~~~~~~~~~~~~~~ 310 (437)
T 3gre_A 246 ------NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC---------QYAFINSDEQPSMEH 310 (437)
T ss_dssp ------TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE---------EEEEESSSSCCCGGG
T ss_pred ------ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE---------EEEEEcCCCCCccce
Confidence 33344443 677789999443 55999999999999999987652 22221
Q ss_pred --------------c--CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc------------------
Q 022590 212 --------------V--PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS------------------ 257 (294)
Q Consensus 212 --------------~--~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------ 257 (294)
. +...|.+++|+ ++ .+|++|+.||.|++||+.+++......-.
T Consensus 311 ~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~--~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (437)
T 3gre_A 311 FLPIEKGLEELNFCGIRSLNALSTISVS-ND--KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTM 387 (437)
T ss_dssp GSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT--EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEE
T ss_pred ecccccccccceecccccCCceEEEEEC-Cc--eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEE
Confidence 1 45668889999 55 58999999999999999887643322210
Q ss_pred ---------------ccccCCCeEEEEEccC--CCEEEEeccCCcEEEEe
Q 022590 258 ---------------HAQSKSPIRQTAMSYD--GSTILSCCEDGAIWRWD 290 (294)
Q Consensus 258 ---------------~~~~~~~v~~~~~s~~--~~~l~s~~~dg~i~vw~ 290 (294)
...|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 388 ~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 388 LLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 1127889999999998 78999999999999995
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-37 Score=248.97 Aligned_cols=214 Identities=14% Similarity=0.164 Sum_probs=172.0
Q ss_pred cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEE
Q 022590 46 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 125 (294)
Q Consensus 46 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~ 125 (294)
......|...|++|+|+|.++++||+|+.||+|+|||+.+++....+. ..+|.+.|++|+|+|.++.+|++|+.||+|+
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~-~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK-GIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC-CCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE-ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 344567889999999999778899999999999999998776544332 2279999999999997788999999999999
Q ss_pred EEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 126 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 126 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
+||++... .........+...+.+++|+ +.+|++|+.||.|++||++..
T Consensus 191 iwd~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-------- 241 (435)
T 4e54_B 191 LQDFKGNI---------------------LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-------- 241 (435)
T ss_dssp EEETTSCE---------------------EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--------
T ss_pred EeeccCCc---------------------eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--------
Confidence 99998621 11111222344567788886 789999999999999998643
Q ss_pred ceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC
Q 022590 204 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 283 (294)
Q Consensus 204 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 283 (294)
.+..+..|...|.+++|+|++. .++++|+.|+.|++||+++.+..... ....+|..+|++++|+|+|++|++++.|
T Consensus 242 --~~~~~~~h~~~v~~v~~~p~~~-~~~~s~s~d~~v~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 242 --ELWNLRMHKKKVTHVALNPCCD-WFLATASVDQTVKIWDLRQVRGKASF-LYSLPHRHPVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp --BCCCSBCCSSCEEEEEECTTCS-SEEEEEETTSBCCEEETTTCCSSSCC-SBCCBCSSCEEECCBCTTSSEEEEEESS
T ss_pred --eeEEEecccceEEeeeecCCCc-eEEEEecCcceeeEEecccccccceE-EEeeeccccccceeECCCCCeeEEEcCC
Confidence 3445667888999999999986 58889999999999999887533222 1233788999999999999999999999
Q ss_pred CcEEEEecCC
Q 022590 284 GAIWRWDAIP 293 (294)
Q Consensus 284 g~i~vw~~~~ 293 (294)
|.|++||+++
T Consensus 318 ~~i~iwd~~~ 327 (435)
T 4e54_B 318 SEIRVYSASQ 327 (435)
T ss_dssp SCEEEEESSS
T ss_pred CEEEEEECCC
Confidence 9999999864
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-36 Score=253.44 Aligned_cols=243 Identities=13% Similarity=0.121 Sum_probs=207.3
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc----cccceecccCcc-eEEEEeCCC-CCceEEEeeCCCcEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVGHGDS-INEIRTQPL-KPSLVVSASKDESVR 79 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~h~~~-v~~~~~~~~-~~~~l~s~~~dg~i~ 79 (294)
.|.+.|.+++|+ |+|+ +|++++ ++.|++|++.++ +....+.+|... |++++|+|. ++++|++|+.||+|+
T Consensus 16 ~~~~~v~~~~~s--pdg~-~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 16 TQRNFTTHLSYD--PTTN-AIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCTTCCCCCEEE--TTTT-EEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CccCceeEEEEC--CCCC-EEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence 688999999998 9999 888888 889999999998 888999999999 999999993 567999999999999
Q ss_pred EEEcCCC--------ceEEEeeccCCCCCceeEEEEecCCCceEEeeecC----CcEEEEeccccccccccceeecCCCC
Q 022590 80 LWNVQTG--------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD----NTVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 80 vwd~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
+||+.++ +....+. .|..+|.+++|+| ++.+|++++.+ +.|++||...
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~~~---------------- 151 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQ---VLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDSGN---------------- 151 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEE---CCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTTCC----------------
T ss_pred EEeCCCCcccccccccccchhh---cccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEECCC----------------
Confidence 9999755 5555666 6999999999999 88889999887 6899998432
Q ss_pred CCCCceeeeceEEeecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC---CeeEEE
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC---DIWFIK 221 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~ 221 (294)
....+..|...|.++.|+ ++ .+++++.|+.|++||+++.+ .+..+..+.. .+.+++
T Consensus 152 ---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~---------~~~~~~~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 152 ---------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK---------FSASDRTHHKQGSFVRDVE 213 (615)
T ss_dssp ---------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE---------EEEEECSSSCTTCCEEEEE
T ss_pred ---------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc---------eeeeecccCCCCceEEEEE
Confidence 355677899999999998 43 89999999999999988654 5677777888 899999
Q ss_pred Eccc-CCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 222 FSCD-FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 222 ~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|+|+ + .++++++.||.|++||+++++...........|..+|.+++|+ ++++|++++.||.|++||+++
T Consensus 214 ~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 214 FSPDSG--EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp ECSTTC--CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred ECCCCC--CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 9999 7 6899999999999999998864332211111567899999999 999999999999999999874
No 92
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-36 Score=270.86 Aligned_cols=270 Identities=18% Similarity=0.280 Sum_probs=213.5
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCC-CCceEEEeeCCCcEEEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL-KPSLVVSASKDESVRLWN 82 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd 82 (294)
+..|.+.|.+++|+ |+|+ +|++++.||.|++||+.+++.+..+.+|...|.+++|+|. +..++++|+.||.|++||
T Consensus 653 ~~~h~~~v~~~~~s--~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFS--SDDS-YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp ECCCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred eccCCCCEEEEEEe--cCCC-EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 45799999999998 8998 9999999999999999999999999999999999999994 345889999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceee--------------------
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW-------------------- 142 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------------- 142 (294)
+.+++.+..+. +|...|.+++|+| ++.+|++++.||.|++||++............
T Consensus 730 ~~~~~~~~~~~---~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 730 LNQKECRNTMF---GHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp TTSSSEEEEEC---CCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred CCCcchhheec---CCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 99999988887 7999999999999 88999999999999999998754322211100
Q ss_pred -cCCCCCCC-----------CceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeee
Q 022590 143 -TDLPSKFP-----------TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ 208 (294)
Q Consensus 143 -~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 208 (294)
.+...... .............|...|.++.|+ +.++++++.|+.|++||+.++. .+.
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~---------~~~ 876 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL---------KVA 876 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE---------EEE
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---------eee
Confidence 00000000 000001112233788899999997 8899999999999999998654 567
Q ss_pred eeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC---------------------------------------
Q 022590 209 KYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP--------------------------------------- 249 (294)
Q Consensus 209 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------------------------------- 249 (294)
.+..|...|.+++|+|++ .++++++.||.|++|++.+..
T Consensus 877 ~~~~h~~~v~~v~~spdg--~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 877 DCRGHLSWVHGVMFSPDG--SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp EECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred ecCCCccceEEEEECCCC--CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 777888889999999988 578888888888888864210
Q ss_pred --------------------------------------ceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 250 --------------------------------------PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 250 --------------------------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
...... ...|...|++++|+|++++|++++.||.|++||+
T Consensus 955 ~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 955 QIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSS--GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp CEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEE--CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred eEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeee--cccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 000111 2257789999999999999999999999999998
Q ss_pred CC
Q 022590 292 IP 293 (294)
Q Consensus 292 ~~ 293 (294)
.+
T Consensus 1033 ~~ 1034 (1249)
T 3sfz_A 1033 QT 1034 (1249)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=243.41 Aligned_cols=246 Identities=13% Similarity=0.212 Sum_probs=186.2
Q ss_pred ceeEEEEEeecCCC--ceEEEEeecCCeEEEEEcCCcccc---------------------------------------c
Q 022590 9 ESFYTVSWACNVDG--IPFLVAGGINGIIRVIDVSNEKLH---------------------------------------K 47 (294)
Q Consensus 9 ~~v~~~~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~---------------------------------------~ 47 (294)
+.|++++|+ |++ . +|++++.||.|++||+.+++.. .
T Consensus 94 ~~V~~l~~~--~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 94 EKINKIRWL--PQKNAA-QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCCCEEEEC--CCCSSS-EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred CceEEEEEc--CCCCcc-eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 889999998 766 5 8999999999999998764431 1
Q ss_pred e-ecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC-ceEEEee----ccCCCCCceeEEEEecCCC-ceEEeeec
Q 022590 48 S-FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG-ICILIFA----GAGGHRNEVLSVDFHPSDI-YRIASCGM 120 (294)
Q Consensus 48 ~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~----~~~~~~~~v~~l~~~~~~~-~~l~~~~~ 120 (294)
. ..+|...|++++|+| ++++|++| .|++|++||+.+. +.+..+. ...+|...|.+++|+| ++ .+|++|+.
T Consensus 171 ~~~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~ 247 (447)
T 3dw8_B 171 IFANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSS 247 (447)
T ss_dssp EECSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEET
T ss_pred EeccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeC
Confidence 2 367999999999999 88999998 7999999999843 3443220 1236999999999999 65 89999999
Q ss_pred CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC------------Cceeeccee--cceEEEeeCCCe
Q 022590 121 DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS------------NYVDCNRWL--GDFILSKSVDNE 186 (294)
Q Consensus 121 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~~--~~~l~~~~~d~~ 186 (294)
||.|++||++...... .....+..|. ..|.+++|+ +.+|++++. +.
T Consensus 248 dg~i~iwd~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~ 307 (447)
T 3dw8_B 248 KGTIRLCDMRASALCD-------------------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS 307 (447)
T ss_dssp TSCEEEEETTTCSSSC-------------------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE
T ss_pred CCeEEEEECcCCcccc-------------------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce
Confidence 9999999999843211 0123334444 489999997 789999988 99
Q ss_pred EEEecCCC-CCCCCCCCCceeeeeeecCCC---------------CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc
Q 022590 187 IVLWEPKM-KEQSPGEGTADILQKYPVPEC---------------DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 250 (294)
Q Consensus 187 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~---------------~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 250 (294)
|++||++. ++ .+..+..|.. .+..++|+|++ .+|++|+.||.|++||+.+++.
T Consensus 308 v~iwd~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~--~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 308 VKVWDLNMENR---------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD--SVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp EEEEETTCCSS---------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS--SEEEEECSTTEEEEEETTTCCE
T ss_pred EEEEeCCCCcc---------ccceeeccccccccccccccccccccceEEEECCCC--CEEEEeccCCEEEEEEcCCCcc
Confidence 99999986 33 2333444432 13348999998 5899999999999999998764
Q ss_pred eeeeecc----------------------------ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 251 VLIARLS----------------------------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 251 ~~~~~~~----------------------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
....... .......|..++|+|++++||+++.++ +++|.-+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 377 ITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred eeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 3211100 112345789999999999999998886 8888754
No 94
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4e-36 Score=233.17 Aligned_cols=214 Identities=21% Similarity=0.239 Sum_probs=177.7
Q ss_pred CCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc-----eEEEeeccCCCCCceeEEEEecCCCceE
Q 022590 41 SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI-----CILIFAGAGGHRNEVLSVDFHPSDIYRI 115 (294)
Q Consensus 41 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~~l 115 (294)
++.++..++++|.+.|++|+|+|+++++|+||+.|++|++||+.+.+ +...+. +|...|.+++|+| ++.+|
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~---~h~~~V~~~~~s~-dg~~l 101 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR---GHSHFVSDVVISS-DGQFA 101 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC---CCSSCEEEEEECT-TSSEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe---CCCCCEEEEEECC-CCCEE
Confidence 33455668999999999999999557899999999999999997654 233444 7999999999999 89999
Q ss_pred EeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCC
Q 022590 116 ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPK 193 (294)
Q Consensus 116 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~ 193 (294)
++++.|+.|++|+... .........+...+....+. +++|++++.|+.+++||+.
T Consensus 102 ~s~~~d~~i~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~ 158 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTT-----------------------GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL 158 (340)
T ss_dssp EEEETTSEEEEEETTT-----------------------TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEcccccceEEeecc-----------------------cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeC
Confidence 9999999999999987 33344555566666666665 7899999999999999987
Q ss_pred CCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccC
Q 022590 194 MKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 273 (294)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 273 (294)
... ........+...+..++|++++...++++++.|+.|++||+++.+. ...+. +|..+|++++|+|+
T Consensus 159 ~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~~--~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 159 GVC--------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNHI--GHTGYLNTVTVSPD 226 (340)
T ss_dssp SCE--------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEEC--CCSSCEEEEEECTT
T ss_pred CCc--------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEec--CCCCcEEEEEECCC
Confidence 543 2344455677889999999998777899999999999999998753 33333 78899999999999
Q ss_pred CCEEEEeccCCcEEEEecCC
Q 022590 274 GSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 274 ~~~l~s~~~dg~i~vw~~~~ 293 (294)
+++|++|+.||.|++||+++
T Consensus 227 ~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 227 GSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp SSEEEEEETTCEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEEecc
Confidence 99999999999999999875
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-36 Score=258.52 Aligned_cols=251 Identities=10% Similarity=0.096 Sum_probs=196.7
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
.|.+.|++++|+ |+++ +||+|+.||.|+||+..+.+....+. |..+|++++|+| +++|++++.|++|++||+.+
T Consensus 15 gh~~~V~~lafs--pdg~-~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 15 GMSSKPIAAAFD--FTQN-LLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp ECSSCEEEEEEE--TTTT-EEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET--TTEEEEEETTCEEEEEETTT
T ss_pred CCCCCcEEEEEC--CCCC-EEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC--CCEEEEEECcCeEEEEECCC
Confidence 789999999998 9998 99999999999999988776655544 788999999999 45999999999999999999
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
++.+..+. |...|++++|+| ++.+|++|+.||.|++||++..... .+.... .........+|.
T Consensus 89 ~~~~~~~~----~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~---~~~i~~---------~~~~~~~~~~h~ 151 (902)
T 2oaj_A 89 QKVLTTVF----VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLS---SFKLDN---------LQKSSFFPAARL 151 (902)
T ss_dssp CSEEEEEE----CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEE---EEEECC---------HHHHHTCSSSCC
T ss_pred CcEEEEEc----CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccc---cceecc---------ccccccccccCC
Confidence 99988886 778999999999 8899999999999999999874321 000000 000002236788
Q ss_pred Cceeecceec---ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecC------------------CCCeeEEEEcc
Q 022590 166 NYVDCNRWLG---DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP------------------ECDIWFIKFSC 224 (294)
Q Consensus 166 ~~i~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------------------~~~i~~~~~~~ 224 (294)
..|.+++|++ ..+++++.|+.| +||+++++ .+..+..+ ...|.+++|+|
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE---------IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE---------EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc---------eEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 9999999983 589999999999 99998764 33333332 46799999999
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCceeeeecc----cc----------ccCCCeEEEEEc----cCC-CEEEEeccC--
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPVLIARLS----HA----------QSKSPIRQTAMS----YDG-STILSCCED-- 283 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~----------~~~~~v~~~~~s----~~~-~~l~s~~~d-- 283 (294)
++ .+|++++.||.|++||+++++......+. +. .+..+|.+++|+ |++ .+|++|+.|
T Consensus 222 dg--~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~ 299 (902)
T 2oaj_A 222 NS--LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISR 299 (902)
T ss_dssp TS--SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTT
T ss_pred CC--CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCC
Confidence 98 69999999999999999988754432221 10 134579999996 443 567777666
Q ss_pred ---CcEEEEec
Q 022590 284 ---GAIWRWDA 291 (294)
Q Consensus 284 ---g~i~vw~~ 291 (294)
+.+.+|++
T Consensus 300 ~~~~~v~~~~~ 310 (902)
T 2oaj_A 300 GDNQSLTMIDL 310 (902)
T ss_dssp SSCCCEEEEEE
T ss_pred CCCceEEEEec
Confidence 37888884
No 96
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.8e-36 Score=258.48 Aligned_cols=245 Identities=21% Similarity=0.312 Sum_probs=207.1
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
+..|..+|.+++|+ |+++ +|++|+.||.|++||+.+++.+..+.+|.+.|++++|+| ++.+|++++.||+|++||+
T Consensus 51 ~~~~~~~v~~~~~s--~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 51 IQVTETPVRAGKFI--ARKN-WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EECCSSCEEEEEEE--GGGT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEG
T ss_pred EecCCCcEEEEEEe--CCCC-EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEEC
Confidence 45799999999998 8898 999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCC-ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
.++ .....+. +|...|.+++|+|.++..|++++.||.|++||++.. .+.....
T Consensus 127 ~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~-----------------------~~~~~~~ 180 (814)
T 3mkq_A 127 ENNWALEQTFE---GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----------------------TPNFTLT 180 (814)
T ss_dssp GGTSEEEEEEE---CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS-----------------------SCSEEEE
T ss_pred CCCceEEEEEc---CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------------------cceeEEe
Confidence 887 5556666 699999999999966789999999999999999862 2233333
Q ss_pred -cCCCceeeccee----cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 163 -VHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 163 -~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.+...+.+++|+ +.++++++.||.|++||+++++ .+..+..|...+.+++|+|++ .++++++.|
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d 249 (814)
T 3mkq_A 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS---------CVATLEGHMSNVSFAVFHPTL--PIIISGSED 249 (814)
T ss_dssp CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE---------EEEEEECCSSCEEEEEECSSS--SEEEEEETT
T ss_pred cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------EEEEEcCCCCCEEEEEEcCCC--CEEEEEeCC
Confidence 344788888884 6799999999999999998654 577778888999999999999 589999999
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCE-EEEeccCCcEEEEecCC
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGST-ILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~vw~~~~ 293 (294)
|.|++||+.+.+. ...+. .+...+.+++|+|+++. +++++.|+.+.+|++..
T Consensus 250 g~v~vwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 250 GTLKIWNSSTYKV--EKTLN--VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SCEEEEETTTCSE--EEEEC--CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CeEEEEECCCCcE--EEEee--cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 9999999998763 33333 55678999999999873 24444566788888753
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.9e-35 Score=234.60 Aligned_cols=238 Identities=17% Similarity=0.230 Sum_probs=197.3
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec--ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
.+.|+|+ ++ + +||+|. |++|+|||..+++..+.+. +|...|++|+|+| ++++|++|+.||+|++||+.+++.
T Consensus 108 ~~~l~wS--~~-n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 108 LNLVDWS--SG-N-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp CBCEEEC--TT-S-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE
T ss_pred ceeEEEC--CC-C-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcE
Confidence 5678997 54 3 777775 8999999999998877654 6778899999999 899999999999999999999999
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
+..+. +|...+.++.++ +.+|++|+.|+.+++||.+.. ...+..+..|...+
T Consensus 182 ~~~~~---~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~----------------------~~~~~~~~~h~~~~ 233 (420)
T 4gga_A 182 LRNMT---SHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVA----------------------EHHVATLSGHSQEV 233 (420)
T ss_dssp EEEEC---CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSS----------------------SCEEEEEECCSSCE
T ss_pred EEEEe---CCCCceEEEeeC---CCEEEEEeCCCceeEeeeccc----------------------ceeeEEecccccce
Confidence 98887 799999999885 468999999999999998873 23456678899999
Q ss_pred eeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE--EcCCCeEEEEe
Q 022590 169 DCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--GNREGKIFVWE 244 (294)
Q Consensus 169 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~dg~i~i~d 244 (294)
..+.+. +.++++++.|+.+++||...++. ....+.....+...|.+++|+|.+. .++++ |+.|+.|++||
T Consensus 234 ~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~-----~~~~~~~~~~~~~~V~~~~~~p~~~-~~la~~~gs~D~~I~iwd 307 (420)
T 4gga_A 234 CGLRWAPDGRHLASGGNDNLVNVWPSAPGEG-----GWVPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWN 307 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESSCCSS-----CSCCSEEECCCSSCEEEEEECTTCT-TEEEEEECTTTCEEEEEE
T ss_pred eeeeecCCCCeeeeeeccccceEEeeccccc-----cceeeeeecccCCceeeeeeCCCcc-cEEEEEeecCCCEEEEEe
Confidence 999997 88999999999999999987754 2234556677888999999999886 45554 56899999999
Q ss_pred ccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec--cCCcEEEEecCC
Q 022590 245 LQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC--EDGAIWRWDAIP 293 (294)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~vw~~~~ 293 (294)
+.+++... .+. +...+.++.|+|+++.+++++ .||.|+|||+.+
T Consensus 308 ~~t~~~~~--~~~---~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 308 VCSGACLS--AVD---AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp TTTTEEEE--EEE---CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred CCccccce--eec---cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 99986433 332 235799999999999888754 799999999864
No 98
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-36 Score=256.45 Aligned_cols=277 Identities=9% Similarity=0.109 Sum_probs=193.8
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceeccc------------------CcceEEEEeCCCC
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH------------------GDSINEIRTQPLK 65 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~ 65 (294)
++.|.++|.+++|+ |++..++++|+.||.| +||+.+++.++.+..| ...|++++|+| +
T Consensus 147 ~~~h~~~V~sl~~s--p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-d 222 (902)
T 2oaj_A 147 PAARLSPIVSIQWN--PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-N 222 (902)
T ss_dssp SSSCCCCCCEEEEE--TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-T
T ss_pred cccCCCCeEEEEEc--cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-C
Confidence 35788999999998 7643389999999999 9999999888777655 57899999999 8
Q ss_pred CceEEEeeCCCcEEEEEcCCCceEEE--eeccCC-------------CCCceeEEEEecC---C-CceEEeeecC-----
Q 022590 66 PSLVVSASKDESVRLWNVQTGICILI--FAGAGG-------------HRNEVLSVDFHPS---D-IYRIASCGMD----- 121 (294)
Q Consensus 66 ~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~-------------~~~~v~~l~~~~~---~-~~~l~~~~~d----- 121 (294)
+.+|++|+.||+|++||+++++.+.. +..... |..+|++++|++. + +.+|++|+.|
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 99999999999999999999887653 211111 3568999999652 2 3567777665
Q ss_pred CcEEEEecccc--------------------ccccc-----c--cee-----------------------------ecCC
Q 022590 122 NTVKIWSMKEF--------------------WTYVE-----K--SFT-----------------------------WTDL 145 (294)
Q Consensus 122 g~i~~wd~~~~--------------------~~~~~-----~--~~~-----------------------------~~~~ 145 (294)
..+++|++... ..... . .+. +...
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence 37888884210 00000 0 000 0000
Q ss_pred CCCC-CC------------cee--------------------eeceEEeecCCCceeeccee--cceEEEeeCCCeEEEe
Q 022590 146 PSKF-PT------------KYV--------------------QFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLW 190 (294)
Q Consensus 146 ~~~~-~~------------~~~--------------------~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iw 190 (294)
.... .. ... ......+.+|...+..++|+ +++|++|+.|++|++|
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 0000 00 000 00001134455566666665 7899999999999999
Q ss_pred cCCCCCCCCCCCCceeee-eee-----cCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc--------------
Q 022590 191 EPKMKEQSPGEGTADILQ-KYP-----VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP-------------- 250 (294)
Q Consensus 191 d~~~~~~~~~~~~~~~~~-~~~-----~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------- 250 (294)
|+..+.... ...+. .+. .|...|.+++|+|++ .+||+|+.||.|++||+.+++.
T Consensus 463 d~~~g~~~~----~~~~~~~l~~~~~~~h~~~V~svafspdg--~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~ 536 (902)
T 2oaj_A 463 DASHGDIQD----NASFEVNLSRTLNKAKELAVDKISFAAET--LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEM 536 (902)
T ss_dssp ESSCCTTTT----TBCEEEEHHHHTTCSSSCCEEEEEEETTT--TEEEEEETTSCEEEEEEEECCC--------------
T ss_pred ECCCccccC----CceEEeechhhcCCCCCCceeEEEecCCC--CeEEEEecCcEEEEEEecCccccCccccCCCcccce
Confidence 998874211 01111 111 677889999999999 6999999999999999987631
Q ss_pred -----------------------------eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 251 -----------------------------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 251 -----------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.....+ ..|.++|++++|+|+| +||+|+.|++|++||++.
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l--~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 537 NFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV--HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp -CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE--CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred eeeeccccCCccccccccccCCCCCCCccceeEEE--EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 012222 3688999999999999 999999999999999864
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.3e-35 Score=231.30 Aligned_cols=245 Identities=10% Similarity=0.113 Sum_probs=179.5
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceE-EEeeCCCcEEEEEc
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV-VSASKDESVRLWNV 83 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~ 83 (294)
+.|.+.|++++|+ |+|+ +|++|+.+| +++|++.+++...... ...+..+++.+ +++.+ ++++.|++|++||+
T Consensus 16 ~~h~~~V~~v~fs--~dg~-~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 16 NHVSNPVTDYEFN--QDQS-CLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLH-RTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ---CCCCCEEEEC--TTSS-EEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECT-TSSEEEEECSSTTEEEEEET
T ss_pred ccCCCceEEEEEC--CCCC-EEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcC-CCCEEEEEECCccEEEEEEC
Confidence 5799999999998 9998 899988775 7899998876654433 23578888888 55555 67888899999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.+++.+..+. +...|.+++|++ + .++++ .|+.|++||+..... .+..+..
T Consensus 89 ~~~~~~~~~~----~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~----------------------~~~~~~~ 138 (355)
T 3vu4_A 89 VKKQDVSRIK----VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWK----------------------RITDDIR 138 (355)
T ss_dssp TTTEEEEEEE----CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCC----------------------BSSCCEE
T ss_pred CCCcEEEEEE----CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCce----------------------eeEEecc
Confidence 9999998887 777999999987 4 24443 478999999987310 0111111
Q ss_pred CCCceeecceecceEEE--eeCCCeEEEecCCCCCCCCCCC------Ccee-eeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 164 HSNYVDCNRWLGDFILS--KSVDNEIVLWEPKMKEQSPGEG------TADI-LQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 164 ~~~~i~~~~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~------~~~~-~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
...+ ++++..+++. |+.+|.|++||++++....... ...+ +..+..|...|.+++|+|++ .+|++|
T Consensus 139 -~~~~--~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g--~~l~s~ 213 (355)
T 3vu4_A 139 -FGGV--CEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS--DMVATC 213 (355)
T ss_dssp -EEEE--EEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS--SEEEEE
T ss_pred -CCce--EEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC--CEEEEE
Confidence 1122 2233356665 6889999999998754211100 0112 56778899999999999998 699999
Q ss_pred cCCCe-EEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 235 NREGK-IFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 235 ~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+.||. |++||+++++... .+....|...|.+++|+|++++|++++.|+.|++||++.
T Consensus 214 s~d~~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 214 SQDGTIIRVFKTEDGVLVR--EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp ETTCSEEEEEETTTCCEEE--EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred eCCCCEEEEEECCCCcEEE--EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 99998 9999999887443 332113778999999999999999999999999999864
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=237.81 Aligned_cols=246 Identities=12% Similarity=0.062 Sum_probs=196.5
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc---ccceecc---------------------------------
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVG--------------------------------- 51 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~--------------------------------- 51 (294)
..++.+++|+ |+|+ +|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s--~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTS--RDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEEC--SSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEec--CCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 3578999987 9998 66665 57899999999888 5544442
Q ss_pred ---------------------cCcceEEEEeCCCCCceE-EEeeCCCcEEEEEcC--CCceEEEeeccCCCCCceeEEEE
Q 022590 52 ---------------------HGDSINEIRTQPLKPSLV-VSASKDESVRLWNVQ--TGICILIFAGAGGHRNEVLSVDF 107 (294)
Q Consensus 52 ---------------------h~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~l~~ 107 (294)
|.+.|++++|+| ++++| ++|+.||.|++||+. +++.+..+.. ..|...|.+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~ 157 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISI 157 (450)
T ss_dssp --------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEE
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEEEE
Confidence 333799999999 77775 899999999999999 8888777652 137789999999
Q ss_pred ecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecc-----eEEEee
Q 022590 108 HPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD-----FILSKS 182 (294)
Q Consensus 108 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~l~~~~ 182 (294)
+| ++.+|++|+.||.+++|++...... ..+...+.+|...|.+++|+.+ +|++++
T Consensus 158 sp-~~~~l~~~~~~g~v~~~~~~~~~~~-------------------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 217 (450)
T 2vdu_B 158 AE-DDTTVIIADKFGDVYSIDINSIPEE-------------------KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD 217 (450)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTSCCCS-------------------SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE
T ss_pred cC-CCCEEEEEeCCCcEEEEecCCcccc-------------------cccceeeecccCceEEEEEcCCCCCCcEEEEEc
Confidence 99 8899999999999999999873211 0022355678999999999743 899999
Q ss_pred CCCeEEEecCCCCCCCCCCCCceeeee-eecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc---
Q 022590 183 VDNEIVLWEPKMKEQSPGEGTADILQK-YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH--- 258 (294)
Q Consensus 183 ~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--- 258 (294)
.|+.|++||+++++ .+.. ...|...|.+++|+ ++ .+|++++.|+.|++||+++++.........
T Consensus 218 ~d~~i~vwd~~~~~---------~~~~~~~~h~~~v~~~~~s-d~--~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~ 285 (450)
T 2vdu_B 218 RDEHIKISHYPQCF---------IVDKWLFGHKHFVSSICCG-KD--YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIK 285 (450)
T ss_dssp TTSCEEEEEESCTT---------CEEEECCCCSSCEEEEEEC-ST--TEEEEEESSSEEEEEETTTCCEEEEEECHHHHG
T ss_pred CCCcEEEEECCCCc---------eeeeeecCCCCceEEEEEC-CC--CEEEEEeCCCeEEEEECCCCcEeeeecchhhhh
Confidence 99999999998765 3333 45788899999999 77 699999999999999999987544433210
Q ss_pred ------------------cccCCCeEEEEEccCCCEEEEec-cCCcEEEEec
Q 022590 259 ------------------AQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDA 291 (294)
Q Consensus 259 ------------------~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~ 291 (294)
......|.+++|+|++++|++++ .|+.|++|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 286 PYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp GGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 02345799999999999999998 8999999998
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-35 Score=246.98 Aligned_cols=245 Identities=17% Similarity=0.220 Sum_probs=206.7
Q ss_pred ccccCce-eEEEEEeecC--CCceEEEEeecCCeEEEEEcCCc--------cccceecccCcceEEEEeCCCCCceEEEe
Q 022590 4 VDQKEES-FYTVSWACNV--DGIPFLVAGGINGIIRVIDVSNE--------KLHKSFVGHGDSINEIRTQPLKPSLVVSA 72 (294)
Q Consensus 4 ~~~h~~~-v~~~~~~~~~--~~~~~l~~~~~dg~i~iw~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 72 (294)
+..|.+. |++++|+ | +++ +|++|+.||.|++||+.++ +....+..|..+|.+++|+| ++++|+++
T Consensus 59 ~~~h~~~~v~~~~~s--p~~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 134 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFS--PIKGSQ-YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVV 134 (615)
T ss_dssp ECTTTTSCEEEEEEC--SSTTCC-EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred EecCCCceEEEEEEC--cCCCCC-EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEe
Confidence 4578999 9999998 8 998 9999999999999999754 67778888999999999999 88999999
Q ss_pred eCC----CcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCC
Q 022590 73 SKD----ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 73 ~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
+.+ +.|.+|| .++.+..+. +|...|.+++|+|++..++++++.|+.|++||++.
T Consensus 135 ~~~~~~~~~v~~~d--~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~----------------- 192 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SGNSLGEVS---GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP----------------- 192 (615)
T ss_dssp ECCSSCSEEEEETT--TCCEEEECC---SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-----------------
T ss_pred ccCCCCccEEEEEE--CCCcceeee---cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-----------------
Confidence 987 6888888 566777776 79999999999994334899999999999999887
Q ss_pred CCCceeeeceEEeecCCC---ceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-e---cCCCCee
Q 022590 149 FPTKYVQFPVFIASVHSN---YVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-P---VPECDIW 218 (294)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~---~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~---~~~~~i~ 218 (294)
......+..|.. .|.+++|+ ++++++++.|+.|++||+++++ .+..+ . .+...+.
T Consensus 193 ------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 193 ------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE---------FLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp ------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC---------EEEECCBTTBCCCSCEE
T ss_pred ------cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC---------EeEEecccccccCCceE
Confidence 445667778888 99999997 5699999999999999998765 45555 4 7888999
Q ss_pred EEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 219 FIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+++|+ ++ .++++++.||.|++||+++.+...........+...+.++.|+ +++++++++.||.|++||+.+
T Consensus 258 ~~~~~-~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 258 ALSWL-DS--QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp EEEES-SS--SEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred EEEEc-CC--CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 99999 76 6899999999999999998764444333322344678888886 889999999999999999863
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-36 Score=233.13 Aligned_cols=230 Identities=10% Similarity=0.073 Sum_probs=178.8
Q ss_pred cCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC---------CCceE
Q 022590 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ---------TGICI 89 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~---------~~~~~ 89 (294)
.+++. ++++|+.||.|++||+.+++.+..+. ...|.++.|+| . +++++.|++|++|+.. +++.+
T Consensus 45 ~~d~~-~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 45 YYDKW-VCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SEEEE-EEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred cCCCC-EEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 35666 99999999999999999999888776 57788999999 4 9999999999999765 44545
Q ss_pred EEeeccCCCCCceeEEEEecC-CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe-ecCCCc
Q 022590 90 LIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-SVHSNY 167 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 167 (294)
..+.. +|..+|.+++|+|. ++.++++++.||.|++||+++.. ..... ..|...
T Consensus 118 ~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----------------------~~~~~~~~~~~~ 172 (343)
T 3lrv_A 118 REIEV--DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----------------------QYIVHSAKSDVE 172 (343)
T ss_dssp EEEEC--CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----------------------EEEEECCCSSCC
T ss_pred EEeec--CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----------------------EEEEEecCCCCc
Confidence 44443 57789999999982 45789999999999999999732 22222 345567
Q ss_pred eeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 168 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
+.+++|+ +.+|++|+.||.|++||+++++. ....+.. |..+|.+++|+|++ .+|++++ ++.|++||
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~--------~~~~~~~~h~~~v~~l~fs~~g--~~l~s~~-~~~v~iwd 241 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ--------ASSRFPVDEEAKIKEVKFADNG--YWMVVEC-DQTVVCFD 241 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTS--------CCEECCCCTTSCEEEEEECTTS--SEEEEEE-SSBEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCC--------CccEEeccCCCCEEEEEEeCCC--CEEEEEe-CCeEEEEE
Confidence 9999997 78999999999999999998763 1144555 88999999999998 5889888 55999999
Q ss_pred ccCCCceeeeeccccccCCCe--EEEEEccCCCEEEEecc-CCcEEEEecC
Q 022590 245 LQSSPPVLIARLSHAQSKSPI--RQTAMSYDGSTILSCCE-DGAIWRWDAI 292 (294)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~s~~~-dg~i~vw~~~ 292 (294)
+++.+....... +..|..++ .+++|+|+|++|++++. |+.|++|+++
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 242 LRKDVGTLAYPT-YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp TTSSTTCBSSCC-CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cCCCCcceeecc-cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 998764322111 11233334 46999999999999988 9999999884
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-35 Score=236.01 Aligned_cols=243 Identities=16% Similarity=0.071 Sum_probs=193.4
Q ss_pred ccCceeEEEEEeecCCCceE-EEEeecCCeEEEEEcC--Cccccceec--ccCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 6 QKEESFYTVSWACNVDGIPF-LVAGGINGIIRVIDVS--NEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~-l~~~~~dg~i~iw~~~--~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
.|.+.|++++|+ |+|+ + +++|+.||.|++||+. +++.+..+. .|...|++++|+| ++.+|++|+.||.|++
T Consensus 100 ~~~~~v~~~~~s--~d~~-~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 100 PIYSYIRNLRLT--SDES-RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVYS 175 (450)
T ss_dssp CCCCCEEEEEEC--TTSS-EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred ccCCceEEEEEc--CCCC-EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEEE
Confidence 455689999998 9998 6 4899999999999999 888888876 5678999999999 8899999999999999
Q ss_pred EEcCCCceEE----EeeccCCCCCceeEEEEecCC---CceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 81 WNVQTGICIL----IFAGAGGHRNEVLSVDFHPSD---IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 81 wd~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
|++.+++... .+. +|...|.+++|+| + +.+|++|+.|+.|++||+++.
T Consensus 176 ~~~~~~~~~~~~~~~~~---~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~--------------------- 230 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPIL---GHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQC--------------------- 230 (450)
T ss_dssp EETTSCCCSSCCCCCSE---ECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCT---------------------
T ss_pred EecCCcccccccceeee---cccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCC---------------------
Confidence 9998877554 444 6999999999999 7 889999999999999999873
Q ss_pred eeeceEE-eecCCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee--------------------
Q 022590 154 VQFPVFI-ASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP-------------------- 211 (294)
Q Consensus 154 ~~~~~~~-~~~~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-------------------- 211 (294)
..+.. ..+|...|.+++|+ +++|++++.|+.|++||+++++. +..+.
T Consensus 231 --~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 231 --FIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN---------LSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp --TCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCE---------EEEEECHHHHGGGCCTTSBC-----
T ss_pred --ceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcE---------eeeecchhhhhhhhhhccccccccc
Confidence 22333 55799999999996 88999999999999999997752 22222
Q ss_pred -----cCCCCeeEEEEcccCCcceEEEEc-CCCeEEEEec--cCC-CceeeeeccccccCCCeEEEEEccCCCEEEEecc
Q 022590 212 -----VPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWEL--QSS-PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 212 -----~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~i~d~--~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
.....+..++|+|++ .++++++ .++.|++|++ ... +......+. .+ ..|.+++|+|++.++++++.
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~--~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~--~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNL--PFVAFFVEATKCIIILEMSEKQKGDLALKQIIT--FP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp -----CBCCCEEEEEECSSS--SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE--CS-SCEEEEEEETTEEEEEECCT
T ss_pred ccccccceEEEEEEEEeCCC--CEEEEEECCCCeEEEEEeccCCCCceeeccEec--cC-CceEEEEecCCcEEEEEecc
Confidence 223568899999988 5777777 8999999999 443 112333333 44 78999999996544444443
Q ss_pred ------CCcEEEEecCC
Q 022590 283 ------DGAIWRWDAIP 293 (294)
Q Consensus 283 ------dg~i~vw~~~~ 293 (294)
+..|.+|.+..
T Consensus 375 ~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 375 ESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp TCCSSCCCSEEEEEEET
T ss_pred cCCCCCCcceEEEEEEc
Confidence 55688987653
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.2e-36 Score=230.48 Aligned_cols=216 Identities=20% Similarity=0.265 Sum_probs=171.8
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCCC-CceEEEeeCCCcEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLK-PSLVVSASKDESVRL 80 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~i~v 80 (294)
++.|.++|++++|++..+++ +|++|+.|++|++||+.+++ ....+.+|...|++++|+|++ +.+|++|+.|++|++
T Consensus 53 l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 53 LRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 56899999999997322477 89999999999999998874 556778899999999999932 789999999999999
Q ss_pred EEcCCCceEEEeeccCCCCCceeEEEEecCC----------------CceEEeeecCCcEEEEeccccccccccceeecC
Q 022590 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSD----------------IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144 (294)
Q Consensus 81 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----------------~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 144 (294)
||+..+..........+|...|.+++|+|.. +.+|++|+.|+.|++||++....
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---------- 201 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ---------- 201 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC----------
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc----------
Confidence 9998764333233334799999999999831 36899999999999999975210
Q ss_pred CCCCCCCceeeeceEEeecCCCceeecceec------ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee
Q 022590 145 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLG------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 218 (294)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 218 (294)
......+.+|...|.+++|++ ++|++++.|++|++||++...... .....+..+...+.
T Consensus 202 ----------~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~-----~~~~~~~~~~~~v~ 266 (316)
T 3bg1_A 202 ----------WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT-----WSPKLLHKFNDVVW 266 (316)
T ss_dssp ----------EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC-----CBCCEEEECSSCEE
T ss_pred ----------cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc-----hhhhhhhcCCCcEE
Confidence 123456778999999999973 689999999999999997632110 01122345678899
Q ss_pred EEEEcccCCcceEEEEcCCCeEEEEeccC
Q 022590 219 FIKFSCDFHYNAAAIGNREGKIFVWELQS 247 (294)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 247 (294)
+++|+|++ .+|++++.||.|++|+...
T Consensus 267 ~v~~sp~g--~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 267 HVSWSITA--NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECTTT--CCEEEEESSSCEEEEEECT
T ss_pred EEEEcCCC--CEEEEEcCCCeEEEEEECC
Confidence 99999998 6899999999999999863
No 105
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=232.58 Aligned_cols=216 Identities=19% Similarity=0.240 Sum_probs=180.0
Q ss_pred ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC--CCceEEEeeccCCCCCceeEEEEecCC--CceEEee
Q 022590 43 EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAGGHRNEVLSVDFHPSD--IYRIASC 118 (294)
Q Consensus 43 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~ 118 (294)
|+++..+.+|.++|++++|+| ++++|++|+.||.|++||+. +++.+..+. +|...|++++|+| + +.+|+++
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~~~l~s~ 75 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAH-PKFGTILASC 75 (379)
T ss_dssp ----CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEE
T ss_pred CCccEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEec---CCCCcEEEEEeCC-CCCCCEEEEe
Confidence 356778899999999999999 88999999999999999997 455566666 7999999999987 5 8999999
Q ss_pred ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCC
Q 022590 119 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKM 194 (294)
Q Consensus 119 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~ 194 (294)
+.||.|++||++... .........|...|.+++|+ +++|++++.|+.|++||++.
T Consensus 76 ~~dg~v~iwd~~~~~---------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 76 SYDGKVLIWKEENGR---------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp ETTSCEEEEEEETTE---------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred ccCCEEEEEEcCCCc---------------------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 999999999998732 12456677799999999997 56899999999999999987
Q ss_pred CCCCCCCCCceeeeeeecCCCCeeEEEEccc-------------CCcceEEEEcCCCeEEEEeccCCCceeeeecccccc
Q 022590 195 KEQSPGEGTADILQKYPVPECDIWFIKFSCD-------------FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS 261 (294)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 261 (294)
... .....+..+...+.+++|+|. + .++++++.||.|++||++..+...........|
T Consensus 135 ~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 135 NGT-------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES--RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp TSC-------CCEEEEECCTTCEEEEEECCCC----------CTT--CEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred CCc-------eeeEEecCCCCceEEEEEcCccccccccccCCCCC--CEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 642 133456678889999999994 5 689999999999999998876543333334478
Q ss_pred CCCeEEEEEccC---CCEEEEeccCCcEEEEecCC
Q 022590 262 KSPIRQTAMSYD---GSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 262 ~~~v~~~~~s~~---~~~l~s~~~dg~i~vw~~~~ 293 (294)
..+|.+++|+|+ +++|++++.||.|++||++.
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 899999999999 89999999999999999875
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-34 Score=218.29 Aligned_cols=239 Identities=17% Similarity=0.230 Sum_probs=195.0
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec--ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
.++|+|+ +++ +||+| .|++|+|||+.+++.++.+. +|...|++++|+| ++++|++|+.||+|++||+++++.
T Consensus 28 ~~~l~WS--~~~--~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWS--SGN--VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEEC--TTS--EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEEC--CCC--EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCcee
Confidence 4679997 665 67776 48999999999999887664 6778899999999 899999999999999999999999
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
+..+. +|...+.++.+. +.++++++.++.+++|+.... ......+..|...+
T Consensus 102 ~~~~~---~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 153 (318)
T 4ggc_A 102 LRNMT---SHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVA----------------------EHHVATLSGHSQEV 153 (318)
T ss_dssp EEEEE---CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSS----------------------SCEEEEEECCSSCE
T ss_pred EEEec---CccceEEEeecC---CCEEEEEecCCceEeeecCCC----------------------ceeEEEEcCccCce
Confidence 99888 699888877664 468999999999999998873 23456678899999
Q ss_pred eeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcc-eEEEEcCCCeEEEEec
Q 022590 169 DCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN-AAAIGNREGKIFVWEL 245 (294)
Q Consensus 169 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~l~~~~~dg~i~i~d~ 245 (294)
..+.+. ++++++++.|+.|++||+++++. ..........+...+..+.++|.+... .+++++.++.|++||.
T Consensus 154 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 154 CGLRWAPDGRHLASGGNDNLVNVWPSAPGEG-----GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESSCBTT-----BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred EEEEEcCCCCEEEEEecCcceeEEECCCCcc-----cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 999886 88999999999999999987754 222345555667889999999987532 2356788999999999
Q ss_pred cCCCceeeeeccccccCCCeEEEEEccCCCEEEEe--ccCCcEEEEecCC
Q 022590 246 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC--CEDGAIWRWDAIP 293 (294)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~--~~dg~i~vw~~~~ 293 (294)
......... .+...+..++|+|+++.++++ +.||.|++||+++
T Consensus 229 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 229 CSGACLSAV-----DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp TTCCEEEEE-----ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ccccccccc-----cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 887633222 445679999999999988765 4899999999864
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=233.42 Aligned_cols=243 Identities=9% Similarity=0.070 Sum_probs=185.1
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc-----------------------------cccceec-ccCc
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-----------------------------KLHKSFV-GHGD 54 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-----------------------------~~~~~~~-~h~~ 54 (294)
++-...|.+++|+ |||+ ++|+++.|++|+ |...+ +....+. .|..
T Consensus 12 ~~~~~~v~sv~~S--pDG~-~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 12 KEFEDWKNNLTWA--RDGT-LYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVC 86 (588)
T ss_dssp CCCSSSSCCEEEC--TTSC-EEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSC
T ss_pred hHhhccEEEEEEC--CCCC-EEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCC
Confidence 3566889999998 9999 999999999995 33222 2112222 4578
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCC-----ceeEEEEecCCCceEEeeecCCcEEEEec
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRN-----EVLSVDFHPSDIYRIASCGMDNTVKIWSM 129 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~~l~~~~~dg~i~~wd~ 129 (294)
.|.+++|+| ++.+||+++.||+|++||... .+..+. |.. .+.+++|+| ++++|++|+.||+|++||+
T Consensus 87 ~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~----~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 87 YPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD----SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp CEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC----CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEEC
T ss_pred cEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc----CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEEC
Confidence 899999999 999999999999999999644 444333 443 599999999 9999999999999999999
Q ss_pred cccccccccceeecCCCCCCCCceeeeceEEe----ecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCce
Q 022590 130 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA----SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 205 (294)
....... . . -..+..+ .+|...|.+++|+++-+++++.|+.+++||+..... ..
T Consensus 159 ~~~~l~~-~-------------~--~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~------~~ 216 (588)
T 2j04_A 159 RKNSENT-P-------------E--FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH------QP 216 (588)
T ss_dssp CCCTTTC-C-------------C--CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS------CC
T ss_pred CCCcccc-c-------------c--ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc------cc
Confidence 8731100 0 0 0012333 568889999999833389999999999999987652 11
Q ss_pred eeeee-ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEE--ccCCCEEEEecc
Q 022590 206 ILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAM--SYDGSTILSCCE 282 (294)
Q Consensus 206 ~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~~~ 282 (294)
....+ ..|...|.+++|+ + ..+++++ ++.|++||+.+.+.. .... +|...|..++| +|++..|+++++
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g--~~LASa~-~~tIkLWd~~~~~~~-~~~~---gh~~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--D--YKVVLTC-PGYVHKIDLKNYSIS-SLKT---GSLENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--T--TEEEEEC-SSEEEEEETTTTEEE-EEEC---SCCSCCCEEEETTCSSCEEEEECSS
T ss_pred ceeeecccccCcEEEEEEE--C--CEEEEEe-CCeEEEEECCCCeEE-EEEc---CCCceEEEEEeeeCCCCCEEEEEcC
Confidence 23344 3677889999999 4 5788887 699999999987521 2222 68899999999 999999999999
Q ss_pred CCcEEEEecC
Q 022590 283 DGAIWRWDAI 292 (294)
Q Consensus 283 dg~i~vw~~~ 292 (294)
||+ ++|...
T Consensus 288 dG~-klw~~d 296 (588)
T 2j04_A 288 TSY-KVLLED 296 (588)
T ss_dssp CEE-EEEESS
T ss_pred CCC-EEEeec
Confidence 999 999864
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-34 Score=225.29 Aligned_cols=237 Identities=11% Similarity=0.093 Sum_probs=191.1
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEc-CCccccceecc--cCcceEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV-SNEKLHKSFVG--HGDSINEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~-~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
..|...|.+++|+ |+++.+|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +.+|++++.|+.|++|
T Consensus 53 ~~~~~~v~~~~~~--~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iw 127 (342)
T 1yfq_A 53 LRYKHPLLCCNFI--DNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVI 127 (342)
T ss_dssp EECSSCEEEEEEE--ESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEE
T ss_pred eecCCceEEEEEC--CCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEE
Confidence 3788999999998 666437999999999999999 77654 77788 999999999999 6799999999999999
Q ss_pred EcCC---------CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccc-cccccccceeecCCCCCCCC
Q 022590 82 NVQT---------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 82 d~~~---------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~ 151 (294)
|+.+ ++.+..+. |...|.+++|+| +. +++++.|+.|++||++. ...
T Consensus 128 d~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~----------------- 183 (342)
T 1yfq_A 128 DPRNYGDGVIAVKNLNSNNTK----VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDD----------------- 183 (342)
T ss_dssp CHHHHTTBCEEEEESCSSSSS----SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTC-----------------
T ss_pred cccccccccccccCCeeeEEe----eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccc-----------------
Confidence 9987 66555554 889999999998 54 99999999999999986 321
Q ss_pred ceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC---------CeeE
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC---------DIWF 219 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---------~i~~ 219 (294)
........|...+.+++|+ ++++++++.||.|++|+++...... .......+..+.. .+.+
T Consensus 184 ----~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (342)
T 1yfq_A 184 ----NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY---NSSKRFAFRCHRLNLKDTNLAYPVNS 256 (342)
T ss_dssp ----CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST---TCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred ----cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc---ccccceeeecccccccccccceeEEE
Confidence 1122344677889999885 5799999999999999998751000 0113444555543 8999
Q ss_pred EEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecccccc-CCCeEEEEEccCCCEEEEeccCCc
Q 022590 220 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS-KSPIRQTAMSYDGSTILSCCEDGA 285 (294)
Q Consensus 220 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~ 285 (294)
++|+|++ .+|++++.||.|++||+.+++. ...+. .| ..+|.+++ |++++|++++.||.
T Consensus 257 ~~~s~~~--~~l~~~~~dg~i~vwd~~~~~~--~~~~~--~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 257 IEFSPRH--KFLYTAGSDGIISCWNLQTRKK--IKNFA--KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEECTTT--CCEEEEETTSCEEEEETTTTEE--EEECC--CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEEcCCC--CEEEEecCCceEEEEcCccHhH--hhhhh--cccCCCceEec--CCCCeEEEEecCCc
Confidence 9999998 5899999999999999998763 33343 55 78999999 99999999999998
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=229.04 Aligned_cols=245 Identities=11% Similarity=0.137 Sum_probs=189.7
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEe--CCCCCceEEEeeCCCcEEEE
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT--QPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~dg~i~vw 81 (294)
+..|.+.|++++|+ |+++ +|++++.||.|++||+.+++... +..|...|++++| +| ++.+|++++.||.|++|
T Consensus 82 ~~~h~~~v~~~~~~--~~~~-~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 82 QQMHTGPVLDVCWS--DDGS-KVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEECSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEE
T ss_pred eccccCCEEEEEEC--cCCC-EEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEE
Confidence 45799999999998 8998 99999999999999999888765 5669999999999 88 88899999999999999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
|+++++.+..+. ....+.++.+.+ ..+++++.++.+++|+++....... .....
T Consensus 157 d~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~-------------------~~~~~ 210 (368)
T 3mmy_A 157 DTRSSNPMMVLQ----LPERCYCADVIY---PMAVVATAERGLIVYQLENQPSEFR-------------------RIESP 210 (368)
T ss_dssp CSSCSSCSEEEE----CSSCEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEE-------------------ECCCS
T ss_pred ECCCCcEEEEEe----cCCCceEEEecC---CeeEEEeCCCcEEEEEeccccchhh-------------------hcccc
Confidence 999999988887 345677777764 4688888999999999987321110 00111
Q ss_pred ecCCCceeecceec----ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC------------CeeEEEEccc
Q 022590 162 SVHSNYVDCNRWLG----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------------DIWFIKFSCD 225 (294)
Q Consensus 162 ~~~~~~i~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~~~~ 225 (294)
..+...+.++.+.. ..+++++.|+.|++||++.... ......+..+.. .+.+++|+|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 284 (368)
T 3mmy_A 211 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV 284 (368)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH------HHHSEEEECSEEC----CCCEEECCEEEEEECTT
T ss_pred ccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc------cccceeeeeeecccccccccccccceEEEEEecC
Confidence 11222233333332 3499999999999999987631 123344444443 6999999999
Q ss_pred CCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 226 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 226 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
+ .+|++++.||.|++||+++++ ....+. .|..+|++++|+|+|++|++++.|+..+.|++
T Consensus 285 ~--~~l~s~~~dg~i~iwd~~~~~--~~~~~~--~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 285 H--GTLATVGSDGRFSFWDKDART--KLKTSE--QLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp T--CCEEEEETTSCEEEEETTTTE--EEEECC--CCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred C--CEEEEEccCCeEEEEECCCCc--EEEEec--CCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 8 589999999999999999875 334444 77889999999999999999999886555443
No 110
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.4e-34 Score=226.82 Aligned_cols=215 Identities=12% Similarity=0.194 Sum_probs=177.4
Q ss_pred CccccceecccCcceEEEEeCCCCC-ceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeec
Q 022590 42 NEKLHKSFVGHGDSINEIRTQPLKP-SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM 120 (294)
Q Consensus 42 ~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~ 120 (294)
..+....+.+|...|++++|+| ++ ++|++|+.||.|++||+.+++....+.. .+|...|.+++|+|.++.+|++++.
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQG-MGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECC-CSTTCBEEEEEEETTEEEEEEEEET
T ss_pred ccceEEeccCCCCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeec-CCcCCceeEEEeCCCCCCEEEEEeC
Confidence 3445567788999999999999 66 8999999999999999998887766542 2599999999999966789999999
Q ss_pred CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCC
Q 022590 121 DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQS 198 (294)
Q Consensus 121 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~ 198 (294)
|+.|++||++... .........|...|.+++|+ +++|++++.|+.|++||++. +
T Consensus 140 d~~i~iwd~~~~~---------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~-- 195 (383)
T 3ei3_B 140 RGATTLRDFSGSV---------------------IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-H-- 195 (383)
T ss_dssp TTEEEEEETTSCE---------------------EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-C--
T ss_pred CCEEEEEECCCCc---------------------eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-C--
Confidence 9999999998521 11122233456889999997 88999999999999999942 2
Q ss_pred CCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc--eeeeeccccccCCCeEEEEEcc-CCC
Q 022590 199 PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSY-DGS 275 (294)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~v~~~~~s~-~~~ 275 (294)
.+..+..|...+.+++|+|++. .++++++.|+.|++||+++.+. .....+ .|...|.+++|+| +++
T Consensus 196 -------~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 196 -------EIFKEKLHKAKVTHAEFNPRCD-WLMATSSVDATVKLWDLRNIKDKNSYIAEM---PHEKPVNAAYFNPTDST 264 (383)
T ss_dssp -------EEEEEECSSSCEEEEEECSSCT-TEEEEEETTSEEEEEEGGGCCSTTCEEEEE---ECSSCEEEEEECTTTSC
T ss_pred -------EEEEeccCCCcEEEEEECCCCC-CEEEEEeCCCEEEEEeCCCCCcccceEEEe---cCCCceEEEEEcCCCCC
Confidence 5677788899999999999984 3899999999999999998432 122222 5778999999999 999
Q ss_pred EEEEeccCCcEEEEecCC
Q 022590 276 TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 276 ~l~s~~~dg~i~vw~~~~ 293 (294)
+|++++.||.|++||+++
T Consensus 265 ~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEEEEESSSEEEEEETTB
T ss_pred EEEEEcCCCcEEEEECCC
Confidence 999999999999999864
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=228.64 Aligned_cols=234 Identities=10% Similarity=0.035 Sum_probs=180.1
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCc-----ceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD-----SINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
.|++.|.+++|+ |+|+ +||+++.||.|++||.+. .+..+. |.. .|.+++|+| ++++|++|+.||+|++
T Consensus 83 ~~~~~V~~vawS--PdG~-~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 83 QPVCYPRVCKPS--PIDD-WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQF 155 (588)
T ss_dssp SCSCCEEEEEEC--SSSS-CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEE
T ss_pred CCCCcEEEEEEC--CCCC-EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEE
Confidence 568899999998 9999 999999999999999544 555666 665 499999999 9999999999999999
Q ss_pred EEcCCCce-------EEEeec-cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCc
Q 022590 81 WNVQTGIC-------ILIFAG-AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 152 (294)
Q Consensus 81 wd~~~~~~-------~~~~~~-~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
||+.++.. +..+.. ..+|...|.+++|+| ++ +++++.|+++++||+.....
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~------------------ 214 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSH------------------ 214 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSS------------------
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCcc------------------
Confidence 99988753 455421 136889999999999 76 88889999999999987320
Q ss_pred eeeeceEEe-ecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEE--cccCCcc
Q 022590 153 YVQFPVFIA-SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKF--SCDFHYN 229 (294)
Q Consensus 153 ~~~~~~~~~-~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~ 229 (294)
......+ .+|...|.+++|+++.+++++ +++|++||+..++ .......|...+..++| +|++ .
T Consensus 215 --~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~---------~~~~~~gh~~~V~~va~~~s~d~--~ 280 (588)
T 2j04_A 215 --QPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYS---------ISSLKTGSLENFHIIPLNHEKES--T 280 (588)
T ss_dssp --CCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTE---------EEEEECSCCSCCCEEEETTCSSC--E
T ss_pred --ccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCe---------EEEEEcCCCceEEEEEeeeCCCC--C
Confidence 0012334 478899999999988999887 6999999998654 21222268899999999 9888 6
Q ss_pred eEEEEcCCCeEEEEeccCC-----Ccee------eee-------ccccccCCCeEEEEEccCCCEEEEecc
Q 022590 230 AAAIGNREGKIFVWELQSS-----PPVL------IAR-------LSHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~-----~~~~------~~~-------~~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
.+++++++|. ++|..+.- .... ... +....+...|.+++|+|||+.+|+++.
T Consensus 281 ~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 8999999999 99987421 0000 000 000011335899999999999999864
No 112
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.7e-33 Score=209.79 Aligned_cols=238 Identities=13% Similarity=0.108 Sum_probs=158.7
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc---cccceecccCc-------------------------ceEEEEe
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE---KLHKSFVGHGD-------------------------SINEIRT 61 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~h~~-------------------------~v~~~~~ 61 (294)
.+.++-|-+.-..++.+++++. ..|++|+..++ +++++++.|+. .|+++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 3566677543333445666665 59999999988 77777777765 4556666
Q ss_pred CCCC----CceEEEeeC--------------------CCcEEEEEc-CCCceEEEeeccCCCCCceeEEEEec--CCCce
Q 022590 62 QPLK----PSLVVSASK--------------------DESVRLWNV-QTGICILIFAGAGGHRNEVLSVDFHP--SDIYR 114 (294)
Q Consensus 62 ~~~~----~~~l~s~~~--------------------dg~i~vwd~-~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~ 114 (294)
+| + ++.+++++. |+.|++|++ .+++.+..+. .|...++.++|+| .++.+
T Consensus 120 sp-d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~---~~~~~v~~l~fs~~~g~~~~ 195 (356)
T 2w18_A 120 SS-DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF---LMPPEETILTFAEVQGMQEA 195 (356)
T ss_dssp -------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE---ECCCSSCEEEEEEEETSTTE
T ss_pred CC-CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeec---cCCCceeeEEeeccCCCCce
Confidence 66 6 666666553 788888888 4466666666 5777788877776 35688
Q ss_pred EEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC---ceeeccee--cce------------
Q 022590 115 IASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN---YVDCNRWL--GDF------------ 177 (294)
Q Consensus 115 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~--~~~------------ 177 (294)
|++++.|++|++||++++ ..+..+..|.. .+.+++|+ +.+
T Consensus 196 LaSgS~D~TIkIWDl~TG-----------------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTG-----------------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp EEEEETTSEEEEEETTTC-----------------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred EEEecCCCcEEEEECCCC-----------------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 999999999999999983 33444444332 44444565 444
Q ss_pred EEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-----ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCcee
Q 022590 178 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-----PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL 252 (294)
Q Consensus 178 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 252 (294)
+++|+.|++|++||..+++. +..+ ..+...+. ..+.++ .++++|+.|++|+|||+.+++.
T Consensus 253 laSGs~D~tIklWd~~tgk~---------l~v~~~~~p~Gh~~~~l--sg~~sg--~~lASgS~DgTIkIWDl~tGk~-- 317 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLS---------VGVMLYCLPPGQAGRFL--EGDVKD--HCAAAILTSGTIAIWDLLLGQC-- 317 (356)
T ss_dssp -----CCEEEEEEETTTTEE---------EEEEEECCCTTCCCCEE--EEEEET--TEEEEEETTSCEEEEETTTCSE--
T ss_pred eeccCCCcEEEEEECCCCEE---------EEEEEeeccCCCcceeE--ccccCC--CEEEEEcCCCcEEEEECCCCcE--
Confidence 36788999999999987652 2222 12333332 233334 5899999999999999999874
Q ss_pred eeeccccccCCCe-EEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 253 IARLSHAQSKSPI-RQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 253 ~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
...+. +|...+ ..++|+|||++|++|+.|++|+|||+.
T Consensus 318 l~tL~--gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 318 TALLP--PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEC--CC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred EEEec--CCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 34444 555544 468999999999999999999999974
No 113
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.2e-34 Score=221.48 Aligned_cols=205 Identities=15% Similarity=0.120 Sum_probs=166.4
Q ss_pred ccCceeEEEEEeecCCCceEEE--EeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEESFYTVSWACNVDGIPFLV--AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~--~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.++..+.+++|+ |||+ +++ +++.|++|+|||+.+++.+..+. |...|.+++|+| ++++|++++.+ .+++|+.
T Consensus 131 ~~~~~~~~v~fS--pDg~-~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~ 204 (365)
T 4h5i_A 131 NADDYTKLVYIS--REGT-VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVIST 204 (365)
T ss_dssp CTTCCEEEEEEC--TTSS-CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEET
T ss_pred CcccCEEEEEEc--CCCC-EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEe
Confidence 344567888887 9998 665 45578999999999999888886 778899999999 89999998865 5667777
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC----cEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN----TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
.+++.+.... ..+|...|.+++|+| ++.++++++.|+ .+++|++...... .....
T Consensus 205 ~~~~~~~~~~-~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~-------------------~~~~~ 263 (365)
T 4h5i_A 205 VTGSCIARKT-DFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTS-------------------VLRSK 263 (365)
T ss_dssp TTCCEEEEEC-CCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEE-------------------EEEEE
T ss_pred ccCcceeeee-cCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceec-------------------ceeee
Confidence 7777654332 226888999999999 889999999887 5788888763211 22345
Q ss_pred EeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee-ecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 160 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
.+..|...|.+++|+ +++|++|+.|+.|+|||+++++ .+..+ ..|...|++++|+|++ .+|++|+.
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~---------~~~~~~~gH~~~V~~v~fSpdg--~~laS~S~ 332 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS---------MSKIFKQAHSFAITEVTISPDS--TYVASVSA 332 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE---------EEEEETTSSSSCEEEEEECTTS--CEEEEEET
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc---------EEEEecCcccCCEEEEEECCCC--CEEEEEeC
Confidence 677899999999997 8899999999999999998765 45554 6799999999999999 69999999
Q ss_pred CCeEEEEeccCC
Q 022590 237 EGKIFVWELQSS 248 (294)
Q Consensus 237 dg~i~i~d~~~~ 248 (294)
|++|+|||+...
T Consensus 333 D~tvrvw~ip~~ 344 (365)
T 4h5i_A 333 ANTIHIIKLPLN 344 (365)
T ss_dssp TSEEEEEECCTT
T ss_pred CCeEEEEEcCCC
Confidence 999999999654
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.4e-33 Score=224.15 Aligned_cols=217 Identities=16% Similarity=0.244 Sum_probs=175.1
Q ss_pred eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC----------CceEEEeeccCCCCCceeEEEEecCCCceEEe
Q 022590 48 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT----------GICILIFAGAGGHRNEVLSVDFHPSDIYRIAS 117 (294)
Q Consensus 48 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~ 117 (294)
....|.+.|++++|+|+++.+|++++.||.|++||+.+ ...+..+. +|...|.+++|+|.+..+|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR---GHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE---CCSSCCCCEEECTTSTTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec---CCCCCeEEEEeCCCCCCeEEE
Confidence 44579999999999994478999999999999999986 46666666 699999999999944449999
Q ss_pred eecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCC
Q 022590 118 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKM 194 (294)
Q Consensus 118 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~ 194 (294)
|+.||.|++||+....... ....+...+..|...|.+++|+ +.+|++++.|+.|++||+++
T Consensus 200 ~~~dg~i~vwd~~~~~~~~----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEH----------------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp ECTTSCEEEEETTSCCBGG----------------GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EeCCCeEEEEeCCCCCCCC----------------ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999998732110 0112345566899999999996 57899999999999999997
Q ss_pred CCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC
Q 022590 195 KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274 (294)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (294)
... ...+..+..|...+.+++|+|++. .++++|+.||.|++||++.... ....+. .|...|.+++|+|++
T Consensus 264 ~~~------~~~~~~~~~~~~~v~~i~~~p~~~-~~l~tg~~dg~v~vwd~~~~~~-~~~~~~--~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 264 NNT------SKPSHTVDAHTAEVNCLSFNPYSE-FILATGSADKTVALWDLRNLKL-KLHSFE--SHKDEIFQVQWSPHN 333 (430)
T ss_dssp SCS------SSCSEEEECCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETTCTTS-CSEEEE--CCSSCEEEEEECSSC
T ss_pred CCC------CcceeEeecCCCCeEEEEeCCCCC-CEEEEEeCCCeEEEEeCCCCCC-CeEEee--cCCCCEEEEEECCCC
Confidence 631 124555667889999999999985 4789999999999999998532 233333 677899999999998
Q ss_pred C-EEEEeccCCcEEEEecCC
Q 022590 275 S-TILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 275 ~-~l~s~~~dg~i~vw~~~~ 293 (294)
+ +|++++.||.|++||+..
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGG
T ss_pred CCEEEEEeCCCcEEEEeCCC
Confidence 5 689999999999999864
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=221.11 Aligned_cols=264 Identities=20% Similarity=0.295 Sum_probs=179.4
Q ss_pred ccCceeEEEEEeecC-CCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCC--CceEEEeeCCCcEEEEE
Q 022590 6 QKEESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLK--PSLVVSASKDESVRLWN 82 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~i~vwd 82 (294)
.|...|.+++|+ | ++. +|++++.||.|++||+.+++....+. +...+.++.|+|.+ +.++++++.||.|++||
T Consensus 97 ~~~~~v~~~~~~--~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 97 VHRYSVETVQWY--PHDTG-MFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp CCSSCEEEEEEC--TTCTT-CEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred cCCCcEEEEEEc--cCCCc-EEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 599999999998 7 555 89999999999999999998887776 77889999999842 33899999999999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.+++.+..+. +|...|.+++|+|++..+|++++.||.|++||++............. ............
T Consensus 173 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 242 (408)
T 4a11_B 173 LKSGSCSHILQ---GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN-------GKKSQAVESANT 242 (408)
T ss_dssp SSSSCCCEEEC---CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT-------TCSCCCTTTSSC
T ss_pred CCCcceeeeec---CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccc-------cccceeeccccc
Confidence 99999888887 69999999999994444699999999999999987432111100000 000011222335
Q ss_pred cCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCC--------------------------------------C
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE--------------------------------------G 202 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~--------------------------------------~ 202 (294)
.|...|.+++|+ +++|++++.|+.|++||+++++..... .
T Consensus 243 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred cccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 788999999997 779999999999999999886542211 1
Q ss_pred CceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEcc-CCCEEEEec
Q 022590 203 TADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSCC 281 (294)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~ 281 (294)
....+..+..|...|.+++|+|++ .+|++++.||.|++||+++.++....... -....+.| ....+.+.+
T Consensus 323 ~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 393 (408)
T 4a11_B 323 SGEQITMLKGHYKTVDCCVFQSNF--QELYSGSRDCNILAWVPSLYEPVPDDDET-------TTKSQLNPAFEDAWSSSD 393 (408)
T ss_dssp TCCEEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEEEEECC-----------------------------------
T ss_pred CCcceeeeccCCCeEEEEEEcCCC--CEEEEECCCCeEEEEeCCCCCccCCCCce-------EeccccccccceeecccC
Confidence 224566677788999999999998 68999999999999999988643322211 11123333 334455677
Q ss_pred cCCcEEEEecC
Q 022590 282 EDGAIWRWDAI 292 (294)
Q Consensus 282 ~dg~i~vw~~~ 292 (294)
.|+.+++|+..
T Consensus 394 ~~~~~~~W~~~ 404 (408)
T 4a11_B 394 EEGGTSAWSHP 404 (408)
T ss_dssp -----------
T ss_pred ccCceeecCCc
Confidence 89999999753
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.5e-33 Score=216.49 Aligned_cols=225 Identities=15% Similarity=0.133 Sum_probs=177.9
Q ss_pred ceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc----eEEEeeccCCCCCceeEEEEecC-CCceEEeeecC
Q 022590 47 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI----CILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMD 121 (294)
Q Consensus 47 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~d 121 (294)
..+.+|.+.|++++|+| ++++|++|+.||.|++||+.++. ....+. +|...|.+++|+|. ++.+|++++.|
T Consensus 5 ~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR---AHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE---CCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceec---cCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 45678999999999999 88999999999999999998763 445555 79999999999984 38899999999
Q ss_pred CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCCCCC
Q 022590 122 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQ 197 (294)
Q Consensus 122 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~ 197 (294)
|.|++||++...... ......+...+..|...|.+++|+ ++++++++.|+.|++||+++++.
T Consensus 81 g~v~vwd~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 81 KTVKLWEEDPDQEEC--------------SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp SCEEEEEECTTSCTT--------------SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred CeEEEEecCCCcccc--------------cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 999999998742110 000123466677899999999997 56899999999999999998764
Q ss_pred CCCCCCceeeeee----ecCCCCeeEEEEccc---CCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEE
Q 022590 198 SPGEGTADILQKY----PVPECDIWFIKFSCD---FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAM 270 (294)
Q Consensus 198 ~~~~~~~~~~~~~----~~~~~~i~~~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 270 (294)
............. ..+...+.+++|+|+ + .++++++.++.+.+|+....+......+. .|...|++++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~ 222 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP--EKLAVSALEQAIIYQRGKDGKLHVAAKLP--GHKSLIRSISW 222 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC--CEEEEEETTEEEEEEECTTSCEEEEEECC--CCCSCEEEEEE
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCC--cEEEEecCCCcEEEEccCCCceeeeeecC--CCCcceeEEEE
Confidence 3322111111111 145678999999997 4 68999999999988888777644455544 78899999999
Q ss_pred ccCC----CEEEEeccCCcEEEEecCC
Q 022590 271 SYDG----STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 271 s~~~----~~l~s~~~dg~i~vw~~~~ 293 (294)
+|++ ++|++|+.||.|++||++.
T Consensus 223 ~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 223 APSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 9998 8999999999999999864
No 117
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-33 Score=217.17 Aligned_cols=214 Identities=16% Similarity=0.230 Sum_probs=177.3
Q ss_pred cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEE
Q 022590 46 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 125 (294)
Q Consensus 46 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~ 125 (294)
...+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++.+..+. +|...|.+++|+| ++.+|++++.||.|+
T Consensus 25 ~~~l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLD---GHTGTIWSIDVDC-FTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEEECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTTEEE
T ss_pred cEEEEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhh---hcCCcEEEEEEcC-CCCEEEEEeCCCeEE
Confidence 356789999999999999 88999999999999999999999998887 6999999999999 889999999999999
Q ss_pred EEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCC-----CeEEEecCCCCCCC
Q 022590 126 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD-----NEIVLWEPKMKEQS 198 (294)
Q Consensus 126 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d-----~~i~iwd~~~~~~~ 198 (294)
+||+.+. .....+. +...+.++.|+ ++++++++.+ +.|++||++.....
T Consensus 100 iwd~~~~-----------------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 100 LWDVSNG-----------------------QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp EEETTTC-----------------------CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred EEECCCC-----------------------cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 9999873 2333344 78889999997 8899999998 99999999876532
Q ss_pred CCCC--CceeeeeeecCCC--CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC
Q 022590 199 PGEG--TADILQKYPVPEC--DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG 274 (294)
Q Consensus 199 ~~~~--~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (294)
.... ..........+.. .+.+++|+|++ .++++++.||.|++||+++... ....+. .|...|.+++|+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~-~~~~~~--~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKG--KYIIAGHKDGKISKYDVSNNYE-YVDSID--LHEKSISDMQFSPDL 230 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGG--CEEEEEETTSEEEEEETTTTTE-EEEEEE--CCSSCEEEEEECTTS
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCC--CEEEEEcCCCEEEEEECCCCcE-eEEEEe--cCCCceeEEEECCCC
Confidence 2110 1112334444444 89999999998 5899999999999999988422 333333 677899999999999
Q ss_pred CEEEEeccCCcEEEEecCC
Q 022590 275 STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 275 ~~l~s~~~dg~i~vw~~~~ 293 (294)
++|++++.||.|++||+++
T Consensus 231 ~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp SEEEEEETTSEEEEEETTT
T ss_pred CEEEEecCCceEEEEECCC
Confidence 9999999999999999874
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-33 Score=216.98 Aligned_cols=222 Identities=10% Similarity=0.125 Sum_probs=167.0
Q ss_pred EEEeecCCeEEEEEcC---------Cccccceec-ccCcceEEEEeCCC-CCceEEEeeCCCcEEEEEcCCCceEEEeec
Q 022590 26 LVAGGINGIIRVIDVS---------NEKLHKSFV-GHGDSINEIRTQPL-KPSLVVSASKDESVRLWNVQTGICILIFAG 94 (294)
Q Consensus 26 l~~~~~dg~i~iw~~~---------~~~~~~~~~-~h~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 94 (294)
+++++.|++|++|+.. +++.+..+. +|.++|.+++|+|. +++++++++.||+|++||+++++.......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 8999999999999765 444344443 57789999999982 467899999999999999999988666542
Q ss_pred cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece-EEeec-CCCceeecc
Q 022590 95 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV-FIASV-HSNYVDCNR 172 (294)
Q Consensus 95 ~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~~ 172 (294)
.|...+.+++|+| ++.+|++|+.||.|++||+++.. .. ..+.. |..+|.+++
T Consensus 168 --~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~-----------------------~~~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 168 --KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPD-----------------------QASSRFPVDEEAKIKEVK 221 (343)
T ss_dssp --CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTT-----------------------SCCEECCCCTTSCEEEEE
T ss_pred --CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCC-----------------------CCccEEeccCCCCEEEEE
Confidence 3666899999999 89999999999999999999832 22 34555 999999999
Q ss_pred ee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCe--eEEEEcccCCcceEEEEcC-CCeEEEEeccC
Q 022590 173 WL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI--WFIKFSCDFHYNAAAIGNR-EGKIFVWELQS 247 (294)
Q Consensus 173 ~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~ 247 (294)
|+ +.+|++++ ++.|++||+++.+.... +..+..+...+ .+++|+|++ .+|++++. |+.+++|++..
T Consensus 222 fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 222 FADNGYWMVVEC-DQTVVCFDLRKDVGTLA------YPTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp ECTTSSEEEEEE-SSBEEEEETTSSTTCBS------SCCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEEEEECT
T ss_pred EeCCCCEEEEEe-CCeEEEEEcCCCCccee------ecccccccccccceEEEECCCC--CEEEEecCCCCcEEEEEEcc
Confidence 97 77999988 55999999998763211 11111122222 469999998 58888887 99999999977
Q ss_pred CCceeeeeccccccCCCeEEEEEcc---CCCEEEEeccCCcEEEEe
Q 022590 248 SPPVLIARLSHAQSKSPIRQTAMSY---DGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~dg~i~vw~ 290 (294)
....... .++..++|.| +.+.|++++.||.+.++-
T Consensus 293 ~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 293 KTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp TTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred cccceEe--------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 6533222 3467788888 778888888888887764
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-33 Score=236.98 Aligned_cols=215 Identities=19% Similarity=0.239 Sum_probs=175.5
Q ss_pred cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC--CCceEEEeeccCCCCCceeEEEEecCC--CceEEeeecC
Q 022590 46 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMD 121 (294)
Q Consensus 46 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~~l~~~~~d 121 (294)
+..+.+|.++|++++|+| ++++|++|+.||+|++||+. +++....+. +|.++|++++|+| + +.+|++|+.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~-~~~~~~l~s~s~D 76 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAH-PKFGTILASCSYD 76 (753)
T ss_dssp ------CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-TTSCSEEEEEETT
T ss_pred eeecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceecc---CCcCceEEEEecC-CCCCCEEEEEeCC
Confidence 356789999999999999 88999999999999999997 445566666 7999999999998 5 8899999999
Q ss_pred CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee----cceEEEeeCCCeEEEecCCCCCC
Q 022590 122 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQ 197 (294)
Q Consensus 122 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~ 197 (294)
|.|++||+++.. .........|...|.++.|+ ++.+++++.||.|++||++....
T Consensus 77 g~I~vwd~~~~~---------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 77 GKVLIWKEENGR---------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 135 (753)
T ss_dssp SCEEEEEEETTE---------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred CeEEEEECCCCc---------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence 999999998732 22456677899999999997 56999999999999999987642
Q ss_pred CCCCCCceeeeeeecCCCCeeEEEEcccC-----------CcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeE
Q 022590 198 SPGEGTADILQKYPVPECDIWFIKFSCDF-----------HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIR 266 (294)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 266 (294)
. .......+...+.+++|+|.. ++.++++|+.||.|++||+++.............|..+|+
T Consensus 136 ~-------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 136 T-------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp C-------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred c-------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 1 234556778899999999941 1268999999999999999987643333333347889999
Q ss_pred EEEEccC---CCEEEEeccCCcEEEEecCC
Q 022590 267 QTAMSYD---GSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 267 ~~~~s~~---~~~l~s~~~dg~i~vw~~~~ 293 (294)
+++|+|+ +++|++|+.||.|++||+++
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 9999999 89999999999999999875
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.2e-33 Score=207.15 Aligned_cols=205 Identities=11% Similarity=0.119 Sum_probs=147.2
Q ss_pred CceeEEEEEeecCC----CceEEEEeec--------------------CCeEEEEEc-CCccccceecccCcceEEEEeC
Q 022590 8 EESFYTVSWACNVD----GIPFLVAGGI--------------------NGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQ 62 (294)
Q Consensus 8 ~~~v~~~~~~~~~~----~~~~l~~~~~--------------------dg~i~iw~~-~~~~~~~~~~~h~~~v~~~~~~ 62 (294)
...|.+++++ |+ ++ ++++++. |+.|++|++ .+++.+..+.+|...++.++|+
T Consensus 111 ~~~v~sla~s--pd~~~~~~-~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 111 IREIRALFCS--SDDESEKQ-VLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp EEEEEEECC--------CCE-EEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred ccceEEEEEC--CCcccccc-EEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 3466667766 66 65 6665543 888888888 4577777777888888888887
Q ss_pred CC--CCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceE------------EeeecCCcEEEEe
Q 022590 63 PL--KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI------------ASCGMDNTVKIWS 128 (294)
Q Consensus 63 ~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l------------~~~~~dg~i~~wd 128 (294)
|. ++.+|++|+.|++|+|||+.+++++..+.....+...+.+++|+| ++.++ ++|+.|++|++||
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEE
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 72 567899999999999999999999999973212234688889999 77765 6688999999999
Q ss_pred ccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeee
Q 022590 129 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ 208 (294)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 208 (294)
..++.......+ ....+|...+.+..+++.++++++.|++|+|||+++++ .+.
T Consensus 267 ~~tgk~l~v~~~------------------~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk---------~l~ 319 (356)
T 2w18_A 267 PKTTLSVGVMLY------------------CLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQ---------CTA 319 (356)
T ss_dssp TTTTEEEEEEEE------------------CCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCS---------EEE
T ss_pred CCCCEEEEEEEe------------------eccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCc---------EEE
Confidence 987432110000 00134555455555668899999999999999999876 677
Q ss_pred eeecCCCCee-EEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 209 KYPVPECDIW-FIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 209 ~~~~~~~~i~-~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
.+..|...+. .++|+|++ .+|++|+.|++|++||+
T Consensus 320 tL~gH~~~vvs~vafSPDG--~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 320 LLPPVSDQHWSFVKWSGTD--SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EECCC--CCCCEEEECSSS--SEEEEECTTSCEEEEEE
T ss_pred EecCCCCCeEEEEEECCCC--CEEEEEECCCcEEEecC
Confidence 7777766554 58999999 59999999999999996
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-31 Score=208.34 Aligned_cols=249 Identities=10% Similarity=0.051 Sum_probs=181.8
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC-ce
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG-IC 88 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~ 88 (294)
.+..+++. ++++.++++|+.|+.|++||..+++.+..+. |..+|.+++|++ + .++++ .|+.|++||+.++ +.
T Consensus 60 ~~~~~~~~--~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 60 HLSKVRML--HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKR 132 (355)
T ss_dssp CCCEEEEC--TTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCB
T ss_pred CeEEEEEc--CCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCcee
Confidence 46777777 5565345778889999999999999988887 677999999988 4 34444 4789999999988 66
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEe--eecCCcEEEEeccccccccccceeecCCCCCCCCceeeec-eEEeecCC
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIAS--CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP-VFIASVHS 165 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~--~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 165 (294)
+..+. . +...+++++ .++++ |+.||.|++||++........... .......+ ...+.+|.
T Consensus 133 ~~~~~---~---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~--------~~~~~~~p~~~~~~~h~ 195 (355)
T 3vu4_A 133 ITDDI---R---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQG--------VQQKAILGKGVLIKAHT 195 (355)
T ss_dssp SSCCE---E---EEEEEEEET---TEEEEEESSCTTCEEEEECCC--------------------------CCEEECCCS
T ss_pred eEEec---c---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCcccccccc--------ccccccCcccEEEEccC
Confidence 66555 2 445566766 44554 689999999999874311100000 00000123 66788999
Q ss_pred Cceeeccee--cceEEEeeCCCe-EEEecCCCCCCCCCCCCceeeeeee-c-CCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 166 NYVDCNRWL--GDFILSKSVDNE-IVLWEPKMKEQSPGEGTADILQKYP-V-PECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 166 ~~i~~~~~~--~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
..|.+++|+ +++|++++.|++ |++||+++++ .+..+. . |...|.+++|+|++ .+|++++.|+.|
T Consensus 196 ~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~---------~~~~~~~g~h~~~v~~~~~s~~~--~~l~s~s~d~~v 264 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV---------LVREFRRGLDRADVVDMKWSTDG--SKLAVVSDKWTL 264 (355)
T ss_dssp SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC---------EEEEEECTTCCSCEEEEEECTTS--CEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc---------EEEEEEcCCCCCcEEEEEECCCC--CEEEEEECCCEE
Confidence 999999997 889999999998 9999999765 566676 4 88999999999998 689999999999
Q ss_pred EEEeccCCCceeeeecc-------------------ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLS-------------------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++||++.........+. ......+...++|++++++|++++.||.+++|++.+
T Consensus 265 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 265 HVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 99999765322111110 011123347799999999999999999999999753
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=5.7e-31 Score=208.08 Aligned_cols=235 Identities=13% Similarity=0.100 Sum_probs=182.3
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceE-EEeeCCCcEEEEEcCCCc
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV-VSASKDESVRLWNVQTGI 87 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~ 87 (294)
..+.+++|+ |+|+.++++++.|+.|++||+.+++.+..+..+. .+.+++|+| ++++| ++++.++.|++||+.+++
T Consensus 32 ~~~~~~~~s--~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 32 SNPMGAVIS--PDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNT 107 (391)
T ss_dssp SSEEEEEEC--TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCcceEEEC--CCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECC-CCCEEEEEECCCCEEEEEECCCCe
Confidence 458888887 9998344778899999999999999888887655 899999999 66665 555677999999999999
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceE-EeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN 166 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
.+..+. +...+.+++|+| ++..+ ++++.|+.|++||+++. .....+..+ .
T Consensus 108 ~~~~~~----~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~-----------------------~~~~~~~~~-~ 158 (391)
T 1l0q_A 108 VAGTVK----TGKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTK-----------------------AVINTVSVG-R 158 (391)
T ss_dssp EEEEEE----CSSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTT-----------------------EEEEEEECC-S
T ss_pred EEEEEe----CCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCC-----------------------cEEEEEecC-C
Confidence 888877 455789999999 66655 78888999999999873 223333333 3
Q ss_pred ceeeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc---CCCeE
Q 022590 167 YVDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN---REGKI 240 (294)
Q Consensus 167 ~i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i 240 (294)
.+.++.|+ ++.+ ++++.++.|++||+++++ ....+. +...+..++|+|++ .++++++ .++.|
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---------~~~~~~-~~~~~~~~~~~~~g--~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---------VIDTVK-VEAAPSGIAVNPEG--TKAYVTNVDKYFNTV 226 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---------EEEEEE-CSSEEEEEEECTTS--SEEEEEEECSSCCEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---------EEEEEe-cCCCccceEECCCC--CEEEEEecCcCCCcE
Confidence 45778886 6566 677889999999998764 333333 34578899999998 4666666 68999
Q ss_pred EEEeccCCCceeeeeccccccCCCeEEEEEccCCCEE-EEeccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI-LSCCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~vw~~~~ 293 (294)
++||+.+++.. ..+. .+ ..+.+++|+|++++| ++++.|+.|++||+++
T Consensus 227 ~~~d~~~~~~~--~~~~--~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 227 SMIDTGTNKIT--ARIP--VG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEETTTTEEE--EEEE--CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCCeEE--EEEe--cC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 99999987533 3333 22 357899999999987 6778999999999864
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.4e-31 Score=213.02 Aligned_cols=239 Identities=14% Similarity=0.019 Sum_probs=190.0
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceE-EEeeCCCcEEEEEc
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV-VSASKDESVRLWNV 83 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~ 83 (294)
..|.+.|.+++|+ |+++ ++++++.|+.|++||+.+++.+..+..|...+.+++|+| +++.+ ++++.|+.|++||+
T Consensus 166 ~~~~~~v~~~~~~--~~~~-~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 166 KKKLGFVETISIP--EHNE-LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp HTTCCEEEEEEEG--GGTE-EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred cccCCceeEEEEc--CCCE-EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEEC
Confidence 3678899999996 8888 999999999999999999999999989999999999999 66666 56668999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeee--------cCCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG--------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~--------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
.+++.+..+. +...+.+++|+| ++..+++++ .||.|++||+++..
T Consensus 242 ~~~~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---------------------- 294 (433)
T 3bws_A 242 KTKLEIRKTD----KIGLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEK---------------------- 294 (433)
T ss_dssp TTTEEEEECC----CCSEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTE----------------------
T ss_pred CCCcEEEEec----CCCCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCc----------------------
Confidence 9998887776 456699999999 777788877 48899999998732
Q ss_pred eceEEeecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEE
Q 022590 156 FPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
.. ....|...+.+++|+ ++ ++++++.++.|++||+++++ ....+. +...+..++|+|++ .+++
T Consensus 295 -~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~---------~~~~~~-~~~~~~~~~~s~dg--~~l~ 360 (433)
T 3bws_A 295 -LI-DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK---------VQKSIP-VFDKPNTIALSPDG--KYLY 360 (433)
T ss_dssp -EE-EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE---------EEEEEE-CSSSEEEEEECTTS--SEEE
T ss_pred -EE-eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc---------EEEEec-CCCCCCeEEEcCCC--CEEE
Confidence 11 122345567778886 54 55677899999999998654 344444 45678999999998 4666
Q ss_pred EEcC---------------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec-cCCcEEEEecCC
Q 022590 233 IGNR---------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAIP 293 (294)
Q Consensus 233 ~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~~ 293 (294)
+++. ||.|++||+.+++... .+. . ...+.+++|+|+|++|++++ .|+.|++|+++.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~--~~~--~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE--FWE--A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE--EEE--C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEE--Eec--C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 6655 5799999998876333 332 1 35689999999999998876 499999999864
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.8e-31 Score=211.24 Aligned_cols=237 Identities=11% Similarity=0.060 Sum_probs=186.3
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc-----eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK-----SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
..+.+++|+ |++. ++++++.++.|++||+.+++... .+.+|...|.+++|+| ++.++++++.|+.|++||+
T Consensus 123 ~~~~~~~~s--~~~~-~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFI--DNTR-LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEES--SSSE-EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEe--CCCe-EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEEC
Confidence 345577776 7665 88888899999999999988776 4567899999999998 8899999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceE-EeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
.+++.+..+. .|...+.+++|+| ++..+ ++++.|+.|++||+++.. ....+.
T Consensus 199 ~~~~~~~~~~---~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~-----------------------~~~~~~ 251 (433)
T 3bws_A 199 KTLAYKATVD---LTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKL-----------------------EIRKTD 251 (433)
T ss_dssp TTCCEEEEEE---CSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTE-----------------------EEEECC
T ss_pred CCceEEEEEc---CCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCc-----------------------EEEEec
Confidence 9999888887 5889999999999 66555 566689999999998732 222222
Q ss_pred cCCCceeeccee--cceEEEee--------CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEE
Q 022590 163 VHSNYVDCNRWL--GDFILSKS--------VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
. ...+.+++|+ ++.+++++ .|+.|++||+++++ ..... .+...+..++|+|+++ .+++
T Consensus 252 ~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---------~~~~~-~~~~~~~~~~~~~~g~-~l~~ 319 (433)
T 3bws_A 252 K-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---------LIDTI-GPPGNKRHIVSGNTEN-KIYV 319 (433)
T ss_dssp C-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---------EEEEE-EEEECEEEEEECSSTT-EEEE
T ss_pred C-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---------EEeec-cCCCCcceEEECCCCC-EEEE
Confidence 2 3457888886 67888877 48899999998664 22222 2234678899999985 3667
Q ss_pred EEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEecc---------------CCcEEEEecCC
Q 022590 233 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE---------------DGAIWRWDAIP 293 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---------------dg~i~vw~~~~ 293 (294)
+++.++.|++||+.+++.. ..+ .+...+.+++|+|+|++|++++. ||.|++||+++
T Consensus 320 ~~~~~~~v~v~d~~~~~~~--~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEKKVQ--KSI---PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EETTTTEEEEEETTTTEEE--EEE---ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EecCCCEEEEEECCCCcEE--EEe---cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 7799999999999987533 233 23467999999999999888776 57999999864
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.3e-31 Score=211.48 Aligned_cols=227 Identities=13% Similarity=0.042 Sum_probs=155.9
Q ss_pred cccccCceeEEEEEeec------CCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCC
Q 022590 3 YVDQKEESFYTVSWACN------VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE 76 (294)
Q Consensus 3 ~~~~h~~~v~~~~~~~~------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 76 (294)
.+..|.+.|++++|++. .+++ +||+|+.|++|+|||+.++.....+..|..+|.+++|+|.+..+|++|+.||
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred ccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 35689999999999841 2677 9999999999999999988888888889999999999995556899999999
Q ss_pred cEEEEEcCCCceEEEeec----------------------cCCCCCceeEEEEecCCCceEEeeecCCcEEEEecccccc
Q 022590 77 SVRLWNVQTGICILIFAG----------------------AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 134 (294)
Q Consensus 77 ~i~vwd~~~~~~~~~~~~----------------------~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 134 (294)
+|++||+.+++....... ..+|...+.++.|++.++..+++++.|+++++||+.....
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 999999988765432211 1268888999999854889999999999999999987433
Q ss_pred ccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee
Q 022590 135 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP 211 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 211 (294)
......... ................+...+..+.+. +.++++|+.||.|++||+.+++ ......
T Consensus 290 ~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~---------~~~~~~ 356 (393)
T 4gq1_A 290 YNEISDSTM----KLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD---------SNSIPI 356 (393)
T ss_dssp ------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT---------CCEEEE
T ss_pred CceEeeecC----ccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc---------EEEEec
Confidence 221110000 000000011111222222222222222 4467788899999999998775 334455
Q ss_pred cCCCCeeEEEEcccCCcceEEEEcCCCeEEEEecc
Q 022590 212 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 246 (294)
Q Consensus 212 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 246 (294)
.+..+|.+++|+|++ ++||+++.+| +.+|.+.
T Consensus 357 ~~~~~V~svafspdG--~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 357 QLGMPIVDFCWHQDG--SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ECSSCEEEEEECTTS--SEEEEEESSE-EEEEEEG
T ss_pred CCCCcEEEEEEcCCC--CEEEEEeCCC-eEEEEEe
Confidence 677889999999999 6899998766 6666654
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=1.8e-29 Score=199.47 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=175.5
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceE-EEeeCCCcEEEEEcCCCceEEEeeccCCCCCcee
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV-VSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 103 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 103 (294)
++++++.|+.|++||+.+++.+..+..|. .+.+++|+| +++++ ++++.|++|++||+.+++.+..+. +...+.
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~ 77 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVP----AGSSPQ 77 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEE----CSSSEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEE----CCCCcc
Confidence 78899999999999999999988888765 589999999 66655 777799999999999999988887 444899
Q ss_pred EEEEecCCCceE-EeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceE-E
Q 022590 104 SVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI-L 179 (294)
Q Consensus 104 ~l~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l-~ 179 (294)
+++|+| ++.+| ++++.++.|++||+.+. .....+. +...+.+++|+ ++.+ +
T Consensus 78 ~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~-----------------------~~~~~~~-~~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 78 GVAVSP-DGKQVYVTNMASSTLSVIDTTSN-----------------------TVAGTVK-TGKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp EEEECT-TSSEEEEEETTTTEEEEEETTTT-----------------------EEEEEEE-CSSSEEEEEECTTSSEEEE
T ss_pred ceEECC-CCCEEEEEECCCCEEEEEECCCC-----------------------eEEEEEe-CCCCcceEEECCCCCEEEE
Confidence 999999 66655 55667799999999873 2233333 34467888887 5666 6
Q ss_pred EeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecccc
Q 022590 180 SKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 259 (294)
Q Consensus 180 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 259 (294)
+++.++.|++||+++++ ....+..+ ..+..++|+|+++ .++++++.++.|++||+++.+.. ..+.
T Consensus 133 ~~~~~~~v~~~d~~~~~---------~~~~~~~~-~~~~~~~~~~dg~-~l~~~~~~~~~v~~~d~~~~~~~--~~~~-- 197 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKA---------VINTVSVG-RSPKGIAVTPDGT-KVYVANFDSMSISVIDTVTNSVI--DTVK-- 197 (391)
T ss_dssp EETTTTEEEEEETTTTE---------EEEEEECC-SSEEEEEECTTSS-EEEEEETTTTEEEEEETTTTEEE--EEEE--
T ss_pred EeCCCCEEEEEECCCCc---------EEEEEecC-CCcceEEECCCCC-EEEEEeCCCCEEEEEECCCCeEE--EEEe--
Confidence 88889999999998664 44445443 4578999999995 34477889999999999987533 2232
Q ss_pred ccCCCeEEEEEccCCCEEEEec---cCCcEEEEecCC
Q 022590 260 QSKSPIRQTAMSYDGSTILSCC---EDGAIWRWDAIP 293 (294)
Q Consensus 260 ~~~~~v~~~~~s~~~~~l~s~~---~dg~i~vw~~~~ 293 (294)
+...+.+++|+|++++|++++ .++.|++||+++
T Consensus 198 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred -cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 335789999999999999887 689999999864
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=2.6e-26 Score=182.30 Aligned_cols=222 Identities=10% Similarity=0.001 Sum_probs=169.1
Q ss_pred CceEEEEeecC------CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCC---cEEEEEcCCCceEEEe
Q 022590 22 GIPFLVAGGIN------GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE---SVRLWNVQTGICILIF 92 (294)
Q Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~ 92 (294)
+. .++.++.+ +.|++||++ +...+.+..|...|.+++|+| +++.|++++.++ .|++||+.+++... +
T Consensus 143 ~~-~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~-l 218 (415)
T 2hqs_A 143 RT-RIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQ-V 218 (415)
T ss_dssp TC-EEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEE-E
T ss_pred CC-EEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEE-e
Confidence 44 56665554 799999997 455678888999999999999 889999999875 99999999988764 4
Q ss_pred eccCCCCCceeEEEEecCCCceEE-eeecCCc--EEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 93 AGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNT--VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 93 ~~~~~~~~~v~~l~~~~~~~~~l~-~~~~dg~--i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
. .|...+.+++|+| ++..|+ +++.|+. |++||+.+.. ...+..|...+.
T Consensus 219 ~---~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~------------------------~~~l~~~~~~~~ 270 (415)
T 2hqs_A 219 A---SFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQ------------------------IRQVTDGRSNNT 270 (415)
T ss_dssp E---CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCC------------------------EEECCCCSSCEE
T ss_pred e---cCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCC------------------------EEeCcCCCCccc
Confidence 4 4788999999999 777666 6666665 8999988621 234556778888
Q ss_pred eccee--cceEEEeeC-CC--eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC---CeEE
Q 022590 170 CNRWL--GDFILSKSV-DN--EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE---GKIF 241 (294)
Q Consensus 170 ~~~~~--~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~ 241 (294)
++.|+ +++|+.++. ++ .|.+||+.+++ ...+..+...+..++|+|+++ +|++++.+ +.|+
T Consensus 271 ~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----------~~~l~~~~~~~~~~~~spdG~--~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 271 EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----------PQRITWEGSQNQDADVSSDGK--FMVMVSSNGGQQHIA 338 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSC----------CEECCCSSSEEEEEEECTTSS--EEEEEEECSSCEEEE
T ss_pred ceEECCCCCEEEEEECCCCCcEEEEEECCCCC----------EEEEecCCCcccCeEECCCCC--EEEEEECcCCceEEE
Confidence 99997 777887776 44 68888987654 122333455688899999994 67666553 5899
Q ss_pred EEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCC---cEEEEecCC
Q 022590 242 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG---AIWRWDAIP 293 (294)
Q Consensus 242 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~vw~~~~ 293 (294)
+||+.+++. ..+. .+. .+.+++|+|+|++|++++.++ .|++||+..
T Consensus 339 ~~d~~~~~~---~~l~--~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 339 KQDLATGGV---QVLS--STF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp EEETTTCCE---EECC--CSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred EEECCCCCE---EEec--CCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 999998763 2233 232 799999999999999988877 799999753
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=2.7e-25 Score=172.43 Aligned_cols=247 Identities=11% Similarity=0.069 Sum_probs=165.5
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecC-CeEEEEEcC--Ccc--ccceecccCcceEEEEeCCCCCceEEEee-CCCcEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGIN-GIIRVIDVS--NEK--LHKSFVGHGDSINEIRTQPLKPSLVVSAS-KDESVR 79 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~d-g~i~iw~~~--~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~ 79 (294)
.+...+.+++|+ |+|+ +|++++.+ +.|.+|+++ +++ .+..+..+. .+..++|+| ++++|++++ .++.|.
T Consensus 35 ~~~~~~~~~~~s--pdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 35 DVPGQVQPMVVS--PDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDH-QGQFVFVGSYNAGNVS 109 (343)
T ss_dssp ECSSCCCCEEEC--TTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECT-TSSEEEEEETTTTEEE
T ss_pred ecCCCCceEEEC--CCCC-EEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcC-CCCEEEEEecCCCeEE
Confidence 355677888887 9998 77777776 999999997 444 334444443 789999999 777666555 588999
Q ss_pred EEEcC---CCceEEEeeccCCCCCceeEEEEecCCCceEEeee-cCCcEEEEeccc-cccccccceeecCCCCCCCCcee
Q 022590 80 LWNVQ---TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 80 vwd~~---~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
+||+. ..+....+. ....+.+++|+| ++.++++++ .++.|++||+.. ....
T Consensus 110 ~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~------------------- 165 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVE----GLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLV------------------- 165 (343)
T ss_dssp EEEEETTEEEEEEEEEC----CCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEE-------------------
T ss_pred EEECCCCcccccccccc----CCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCcee-------------------
Confidence 99994 333444443 344689999999 776666666 899999999976 2110
Q ss_pred eeceE--Eee-cCCCceeeccee--cceEEE-eeCCCeEEEecCCCCCCCCCCCCceeeeeee---cC---CCCeeEEEE
Q 022590 155 QFPVF--IAS-VHSNYVDCNRWL--GDFILS-KSVDNEIVLWEPKMKEQSPGEGTADILQKYP---VP---ECDIWFIKF 222 (294)
Q Consensus 155 ~~~~~--~~~-~~~~~i~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~---~~~i~~~~~ 222 (294)
... ... .....+..+.|+ ++++++ +..++.|.+||+..... ......... .. ...+..++|
T Consensus 166 --~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 166 --AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG-----NIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp --EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS-----CCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred --eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC-----cEEEEeeccccCccccccCCccceEE
Confidence 000 111 123456677776 665654 45789999999964211 111122222 11 235668999
Q ss_pred cccCCcceEEEEcCCCeEEEEeccC--CCceeeeeccccccCCCeEEEEEccCCCEEEEec-cCCcEEEEecC
Q 022590 223 SCDFHYNAAAIGNREGKIFVWELQS--SPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 292 (294)
Q Consensus 223 ~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~ 292 (294)
+|+++ .+++++..++.|.+||+.. ++......+. .+ ..+..++|+|+|++|++++ .++.|.+|++.
T Consensus 239 s~dg~-~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 239 TPDGR-HLYACDRTASLITVFSVSEDGSVLSKEGFQP--TE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CTTSS-EEEEEETTTTEEEEEEECTTSCCEEEEEEEE--CS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCC-EEEEEecCCCEEEEEEEcCCCCceEEeeeec--CC-CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 99985 2444666899999999983 3323333333 22 2388999999999888877 68999999664
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=3.5e-26 Score=182.16 Aligned_cols=244 Identities=12% Similarity=0.136 Sum_probs=166.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccc----------cc-----eecccCcceEEEEeCCCCCceEE-
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL----------HK-----SFVGHGDSINEIRTQPLKPSLVV- 70 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~----------~~-----~~~~h~~~v~~~~~~~~~~~~l~- 70 (294)
....++.++++ +++. ++++++.++ +++|+...... .. ....+...|++++|+| ++++|+
T Consensus 35 ~~~~~n~lavs--~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav 109 (434)
T 2oit_A 35 PKERSSLLAVS--NKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSA 109 (434)
T ss_dssp CCSCCBCEEEE--TTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEE
T ss_pred CCCCccEEEEe--cCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEE
Confidence 34568889998 7777 899998887 89987532110 00 0112556799999999 888888
Q ss_pred ---EeeCCCcEEEEEcCCC--------ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccc
Q 022590 71 ---SASKDESVRLWNVQTG--------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS 139 (294)
Q Consensus 71 ---s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 139 (294)
+|+.|++|++||+.++ +.+..+....+|...|.+++|+|.++.+|++++.||+|++||+++.
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~------- 182 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET------- 182 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-------
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-------
Confidence 8899999999998765 3333344444799999999999955889999999999999999972
Q ss_pred eeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecC----
Q 022590 140 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP---- 213 (294)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---- 213 (294)
........|...|.+++|+ +++|++|+.||.|++||++ ++ ....+..+
T Consensus 183 ----------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~---------~~~~~~~~~~~~ 236 (434)
T 2oit_A 183 ----------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ---------EKKVIPCPPFYE 236 (434)
T ss_dssp ----------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC---------EEEEECCCTTCC
T ss_pred ----------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc---------ccccccCCcccC
Confidence 2234455688999999997 8899999999999999998 32 12222221
Q ss_pred ---CCCeeEEEEcccCCcceEEE-EcCCC------eEEEEeccCCCc---eeeeeccc-----cccCCCeEEEEEccCCC
Q 022590 214 ---ECDIWFIKFSCDFHYNAAAI-GNREG------KIFVWELQSSPP---VLIARLSH-----AQSKSPIRQTAMSYDGS 275 (294)
Q Consensus 214 ---~~~i~~~~~~~~~~~~~l~~-~~~dg------~i~i~d~~~~~~---~~~~~~~~-----~~~~~~v~~~~~s~~~~ 275 (294)
...+.++.|+++. .++++ ...+| .+++|++.+.+. .....+.. ...+.+-..+..-++.+
T Consensus 237 ~~~~~~v~~v~w~~~~--~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~ 314 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTY--VFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWD 314 (434)
T ss_dssp TTSCEEEEEEEEEETT--EEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGT
T ss_pred CCCceeEEEEEEecCc--eEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCC
Confidence 2368889999876 34433 33443 389999986531 11111111 12233333444446767
Q ss_pred EEEEec-cCCcEEEEe
Q 022590 276 TILSCC-EDGAIWRWD 290 (294)
Q Consensus 276 ~l~s~~-~dg~i~vw~ 290 (294)
++++++ ..+.|.|..
T Consensus 315 l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 315 LVLAASAASTEVSILA 330 (434)
T ss_dssp EEEEEETTCSBCEEEE
T ss_pred EEEEecCCCCceeEEE
Confidence 666554 344455554
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=3.1e-26 Score=173.93 Aligned_cols=235 Identities=14% Similarity=0.144 Sum_probs=171.5
Q ss_pred cccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC-ccccceeccc-CcceEEEEeCCCCCceEEEee--CCCcEEE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-EKLHKSFVGH-GDSINEIRTQPLKPSLVVSAS--KDESVRL 80 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~--~dg~i~v 80 (294)
..|.+.|.+++|+ |+|+ +|++++ ++.|++||+.+ ++.......+ ...+.+++|+| ++++|++++ .++...|
T Consensus 38 ~~~~~~v~~~~~s--pdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 38 WQTPELFEAPNWS--PDGK-YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EEESSCCEEEEEC--TTSS-EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TSSEEEEEECTTTSSCEE
T ss_pred ccCCcceEeeEEC--CCCC-EEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-CCCEEEEEEeCCCCcceE
Confidence 3578889999998 9999 888876 78999999998 8777666665 47889999999 888999888 3455666
Q ss_pred EEc--CCCceEEEeeccCCCCCceeEEEEecCCCceEE-eeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 81 WNV--QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 81 wd~--~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
|.+ .+++ ...+. +...+..++|+| ++..|+ ++..++.+++|+++... ..
T Consensus 113 ~~~~~~~~~-~~~~~----~~~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~----------------------~~ 164 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMT----KNLPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDS----------------------GV 164 (297)
T ss_dssp EEEETTCCC-CEECC----SSSSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTT----------------------CC
T ss_pred EEEECCCCc-eEEee----cCCCccceEECC-CCCEEEEEECCCCceEEEEEECCC----------------------Cc
Confidence 655 4444 33343 334589999999 666555 78889999999976411 11
Q ss_pred eEEeecCCCceeeccee--cceEEEee-CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 158 VFIASVHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
...+..+...+.++.|+ +++++.++ .++.+++|++..... ....+..+...+..+.|+|++ .+|+++
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~s~dg--~~l~~~ 234 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--------SVERITDSAYGDWFPHPSPSG--DKVVFV 234 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--------CEEECCCCSEEEEEEEECTTS--SEEEEE
T ss_pred ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC--------CcEEEecCCcccCCeEECCCC--CEEEEE
Confidence 23445567788888886 66676655 588999998863221 234455555678889999999 466666
Q ss_pred cCC-----------CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCC
Q 022590 235 NRE-----------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284 (294)
Q Consensus 235 ~~d-----------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 284 (294)
+.+ +.|++||+.+++........ .|...+..++|+|++++|++++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF--GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE--ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccC--CCCcccccceECCCCCEEEEEEecc
Confidence 554 56999999988654444433 5567899999999999999887654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=4.8e-25 Score=175.01 Aligned_cols=220 Identities=13% Similarity=0.057 Sum_probs=166.0
Q ss_pred ccccCceeEEEEEeecCCCceEEEEeecCC---eEEEEEcCCccccceecccCcceEEEEeCCCCCceEE-EeeCCCc--
Q 022590 4 VDQKEESFYTVSWACNVDGIPFLVAGGING---IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV-SASKDES-- 77 (294)
Q Consensus 4 ~~~h~~~v~~~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-s~~~dg~-- 77 (294)
+..|.+.|.+++|+ |+|+ +|++++.++ .|++||+.+++.. .+..|...+.+++|+| +++.|+ +++.++.
T Consensus 174 l~~~~~~v~~~~~S--pdg~-~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 174 VHRSPQPLMSPAWS--PDGS-KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLN 248 (415)
T ss_dssp EEEESSCEEEEEEC--TTSS-EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCE
T ss_pred EeCCCCcceeeEEc--CCCC-EEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEecCCCce
Confidence 34688899999998 9999 899998875 9999999988764 5667888999999999 777666 6666665
Q ss_pred EEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeec-CC--cEEEEeccccccccccceeecCCCCCCCCcee
Q 022590 78 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-DN--TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 78 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
|.+||+.+++.. .+. .|...+.+++|+| ++..|++++. ++ .|.+||+....
T Consensus 249 i~~~d~~~~~~~-~l~---~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~--------------------- 302 (415)
T 2hqs_A 249 LYVMDLASGQIR-QVT---DGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGA--------------------- 302 (415)
T ss_dssp EEEEETTTCCEE-ECC---CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSC---------------------
T ss_pred EEEEECCCCCEE-eCc---CCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCC---------------------
Confidence 999999887763 444 5888999999999 7777777765 45 56777877621
Q ss_pred eeceEEeecCCCceeeccee--cceEEEeeCC---CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcc
Q 022590 155 QFPVFIASVHSNYVDCNRWL--GDFILSKSVD---NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 155 ~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (294)
...+..+...+..+.|+ +++|++++.+ ..|.+||+.+++. ..+..+. .+..++|+|++ .
T Consensus 303 ---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~----------~~l~~~~-~~~~~~~spdg--~ 366 (415)
T 2hqs_A 303 ---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV----------QVLSSTF-LDETPSLAPNG--T 366 (415)
T ss_dssp ---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE----------EECCCSS-SCEEEEECTTS--S
T ss_pred ---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE----------EEecCCC-CcCCeEEcCCC--C
Confidence 12233456677788886 7888887764 5899999987641 2233333 78899999999 4
Q ss_pred eEEEEcCCC---eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC
Q 022590 230 AAAIGNREG---KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 275 (294)
Q Consensus 230 ~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 275 (294)
+|++++.++ .|++||+.... ...+. .+.+.|.+++|+|...
T Consensus 367 ~l~~~s~~~~~~~l~~~d~~g~~---~~~l~--~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 367 MVIYSSSQGMGSVLNLVSTDGRF---KARLP--ATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEEETTEEEEEEEETTSCC---EEECC--CSSSEEEEEEECCCCC
T ss_pred EEEEEEcCCCccEEEEEECCCCc---EEEee--CCCCCCcCCccccccc
Confidence 677776666 79999997653 33444 6678899999999753
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=9.6e-25 Score=168.58 Aligned_cols=250 Identities=10% Similarity=0.057 Sum_probs=170.5
Q ss_pred cCceeEEEEEeecCCCceEEEEe-ecCCeEEEEEcCCccc-cceecccCcceEEEEeCCCCCceEEEeeCCC---cEEEE
Q 022590 7 KEESFYTVSWACNVDGIPFLVAG-GINGIIRVIDVSNEKL-HKSFVGHGDSINEIRTQPLKPSLVVSASKDE---SVRLW 81 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg---~i~vw 81 (294)
+...+ .++|+ |+|+ +++++ ..++.|.+||..+++. ...+..+..+..+++|+| ++++++++..++ .|.+|
T Consensus 39 ~~~~~-~~~~s--~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 39 GYDFV-DTAIT--SDCS-NVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCCEE-EEEEC--SSSC-EEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEE
T ss_pred cCCcc-eEEEc--CCCC-EEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEE
Confidence 34455 77776 9998 55554 4589999999999987 777777777766699999 888888655553 89999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCc-eEEeeecCCc-EEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNT-VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-~l~~~~~dg~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
|+.+++.+..+. ....+.+++|+| +++ ++++...++. +.+|++....... ... .
T Consensus 114 d~~~~~~~~~~~----~~~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~------------------~~~-~ 169 (331)
T 3u4y_A 114 SFLKNKFISTIP----IPYDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLF------------------DTG-Q 169 (331)
T ss_dssp ETTTTEEEEEEE----CCTTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEE------------------EEE-E
T ss_pred ECCCCCeEEEEE----CCCCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEe------------------ecC-C
Confidence 999999888776 445679999999 665 4555566688 9999988521100 000 1
Q ss_pred EeecCCCceeeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 160 IASVHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
...........+.|+ ++++ +++..++.|.+||+.+++. ...+..+.. ...+..++|+|+++ .++++...
T Consensus 170 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~------~~~~~~~~~-~~~~~~~~~spdg~-~l~v~~~~ 241 (331)
T 3u4y_A 170 EFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN------ITLLNAVGT-NNLPGTIVVSRDGS-TVYVLTES 241 (331)
T ss_dssp EEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS------CEEEEEEEC-SSCCCCEEECTTSS-EEEEECSS
T ss_pred ccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc------cceeeeccC-CCCCceEEECCCCC-EEEEEEcC
Confidence 111233446777776 6655 4555689999999987652 112444443 35567899999995 23344456
Q ss_pred CCeEEEEeccCCCceeeeecccc-----ccCCCeEEEEEccCCCEEEEe-ccCCcEEEEecCC
Q 022590 237 EGKIFVWELQSSPPVLIARLSHA-----QSKSPIRQTAMSYDGSTILSC-CEDGAIWRWDAIP 293 (294)
Q Consensus 237 dg~i~i~d~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vw~~~~ 293 (294)
++.|.+||+.+++......+... ........++|+|+|++|+++ ..++.|.+||+..
T Consensus 242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 78899999998764333322211 111223568999999988655 4567999999875
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=7.8e-25 Score=178.91 Aligned_cols=245 Identities=12% Similarity=0.056 Sum_probs=172.4
Q ss_pred ecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc--CCCceEEEeecc
Q 022590 18 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QTGICILIFAGA 95 (294)
Q Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~ 95 (294)
++|++. ++++++.|++|.+||..+++.+.++..+.. +..++|+| ++++|++++.|++|++||+ .+++.+..+.
T Consensus 145 ~~p~~~-~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-- 219 (543)
T 1nir_A 145 LDLPNL-FSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-- 219 (543)
T ss_dssp CCGGGE-EEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE--
T ss_pred cCCCCE-EEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe--
Confidence 458887 899999999999999999999998884333 89999999 9999999999999999999 8888888877
Q ss_pred CCCCCceeEEEEec----CCCceEEeee-cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC-Ccee
Q 022590 96 GGHRNEVLSVDFHP----SDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS-NYVD 169 (294)
Q Consensus 96 ~~~~~~v~~l~~~~----~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~ 169 (294)
+...+..++|+| ++ +++++++ .+++|.+||..+.+........ .........|. ..+.
T Consensus 220 --~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~-------------g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 220 --IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVSTR-------------GMTVDTQTYHPEPRVA 283 (543)
T ss_dssp --CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEECC-------------EECSSSCCEESCCCEE
T ss_pred --cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeeccc-------------CcccCccccccCCceE
Confidence 556789999998 55 4566655 6899999998874321110000 00000000122 2567
Q ss_pred eccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEecc
Q 022590 170 CNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 246 (294)
Q Consensus 170 ~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 246 (294)
.+.++ +.++++...++.|.+||..+.+.. .+..+. +...+..+.|+|+++ .+++++..++.|.+||+.
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-------~~~~i~-~~~~~~~~~~spdg~-~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNL-------TVTSIG-AAPFLHDGGWDSSHR-YFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSC-------EEEEEE-CCSSCCCEEECTTSC-EEEEEEGGGTEEEEEETT
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcc-------eeEEec-cCcCccCceECCCCC-EEEEEecCCCeEEEEECC
Confidence 77775 456777788999999999876421 122333 345677899999995 244556678999999999
Q ss_pred CCCceeeeeccccccCCCeEEEEEccC-CCEEEEec-cCCcEEEEecCC
Q 022590 247 SSPPVLIARLSHAQSKSPIRQTAMSYD-GSTILSCC-EDGAIWRWDAIP 293 (294)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~-~dg~i~vw~~~~ 293 (294)
+++...........|.+....+ ++|+ +.+++++. .|++|.+||+.+
T Consensus 355 tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 355 DRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 9864443332222344433333 4676 66777775 689999999875
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=2e-24 Score=176.52 Aligned_cols=251 Identities=12% Similarity=0.069 Sum_probs=182.4
Q ss_pred CceeEEEEEeecC----CCceEEEEee-cCCeEEEEEcCCccccceecc----------cCc-ceEEEEeCCCCCceEEE
Q 022590 8 EESFYTVSWACNV----DGIPFLVAGG-INGIIRVIDVSNEKLHKSFVG----------HGD-SINEIRTQPLKPSLVVS 71 (294)
Q Consensus 8 ~~~v~~~~~~~~~----~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~~~l~s 71 (294)
...+..++|+ | +|+ ++++++ .+++|.+||..++++++++.. |.. .+.++.++|++..++++
T Consensus 221 g~~p~~va~s--p~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 221 GIEARSVESS--KFKGYEDR-YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp CSEEEEEEEC--CSTTCTTT-EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred CCCcceEEeC--CCcCCCCC-EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 3456777876 8 999 777777 589999999999998887764 223 78999999966677888
Q ss_pred eeCCCcEEEEEcCCCceEE--EeeccCCCCCceeEEEEecCCCceEE-eeecCCcEEEEeccccccccccceeecCCCCC
Q 022590 72 ASKDESVRLWNVQTGICIL--IFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 72 ~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
...+++|.+||+.+.+.+. .+. +...+.++.|+| ++++|+ ++..+++|.+||+.+++.
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~i~----~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l-------------- 358 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTSIG----AAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRL-------------- 358 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEEEE----CCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEE--------------
T ss_pred ECCCCeEEEEEecCCCcceeEEec----cCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeE--------------
Confidence 8899999999998876554 333 666788999999 776555 555689999999998432
Q ss_pred CCCceeeeceEEee----cCCCceeecce-e-cceEEEee-CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 149 FPTKYVQFPVFIAS----VHSNYVDCNRW-L-GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 149 ~~~~~~~~~~~~~~----~~~~~i~~~~~-~-~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
...+. .|......+.. + +..++++. .|++|.+||+.+.... ....+.++.++.+...+..++
T Consensus 359 ---------~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 359 ---------SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp ---------EEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEEEECSCSCCCCEE
T ss_pred ---------EEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc--hhcCeEEEEEEcCCCCceEEE
Confidence 22222 24433222211 2 55666665 5899999999873211 112457888888888888999
Q ss_pred EcccCCcceEEEEc-------CCCeEEEEeccCCCce-eeeecc----ccccCCCeEEEEEccCCCEEEEe-----ccCC
Q 022590 222 FSCDFHYNAAAIGN-------REGKIFVWELQSSPPV-LIARLS----HAQSKSPIRQTAMSYDGSTILSC-----CEDG 284 (294)
Q Consensus 222 ~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~-~~~~~~----~~~~~~~v~~~~~s~~~~~l~s~-----~~dg 284 (294)
++|++ .+|++++ .++.|.+||+.+.+.. ....+. ...+...+..++|+|+|+.|+.+ +.|+
T Consensus 428 ~~pdg--~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~ 505 (543)
T 1nir_A 428 THPKS--SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS 505 (543)
T ss_dssp CCTTC--CEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCC
T ss_pred cCCCC--CcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCC
Confidence 99999 5788876 2679999999998754 221111 12445789999999999998866 3479
Q ss_pred cEEEEecCC
Q 022590 285 AIWRWDAIP 293 (294)
Q Consensus 285 ~i~vw~~~~ 293 (294)
.|.|||.++
T Consensus 506 ~i~v~D~~t 514 (543)
T 1nir_A 506 ALVVVDDKT 514 (543)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 999999875
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=4.7e-25 Score=187.90 Aligned_cols=250 Identities=9% Similarity=0.012 Sum_probs=173.8
Q ss_pred CceeEEEEEeecCCCceEEEEeec-CC-----eEEEEEcCCccccceecccCc------------------------ceE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGI-NG-----IIRVIDVSNEKLHKSFVGHGD------------------------SIN 57 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~h~~------------------------~v~ 57 (294)
...+.+++|+ |||+ +|++++. |+ .|++||+.+++....+..+.. .|.
T Consensus 36 ~~~~~~~~~S--pdG~-~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVA--PDGS-RVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEEC--TTSS-EEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEe--cCCC-EEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 4578999998 9999 8999888 88 999999999887666654432 389
Q ss_pred EEEeCCCCCceEEEeeCCCcEEEEEcCCCc--eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccc
Q 022590 58 EIRTQPLKPSLVVSASKDESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 135 (294)
Q Consensus 58 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 135 (294)
+++|+| ++++|++++. +.|.+||+.++. ....+. .|...+.+++|+| +++.|+.++ ++.|++||+.++...
T Consensus 113 ~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~---~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 113 DYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLT---HGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCC---CSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred eeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcc---cCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEE
Confidence 999999 8898988886 999999998872 333344 4778899999999 888888887 569999999873221
Q ss_pred cccceeecCCCCCCCCceeeeceEEeecC--------CCceeeccee--cceEEEeeCCC--------------------
Q 022590 136 VEKSFTWTDLPSKFPTKYVQFPVFIASVH--------SNYVDCNRWL--GDFILSKSVDN-------------------- 185 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~--~~~l~~~~~d~-------------------- 185 (294)
...... ... ...++ ...+..+.|+ |++|++++.|+
T Consensus 186 ~~~~~~-------------~~~--~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~ 250 (741)
T 2ecf_A 186 QLTADG-------------STT--IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIE 250 (741)
T ss_dssp ECCCCC-------------CSS--EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEE
T ss_pred EeccCC-------------ccc--eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceE
Confidence 100000 000 00000 1124667776 78888887665
Q ss_pred -------------eEEEecCCC-CCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc-----CCCeEEEEecc
Q 022590 186 -------------EIVLWEPKM-KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN-----REGKIFVWELQ 246 (294)
Q Consensus 186 -------------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-----~dg~i~i~d~~ 246 (294)
.|.+||+.+ ++. ..+.....+...+..++| |+++ .|+++. .+..|++||+.
T Consensus 251 ~~~~~~g~~~~~~~l~~~d~~~~~~~-------~~~~~~~~~~~~~~~~~~-pDg~--~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 251 QRYPAAGDANVQVKLGVISPAEQAQT-------QWIDLGKEQDIYLARVNW-RDPQ--HLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp EECCBTTSCCCEEEEEEECSSTTCCC-------EEECCCSCSSEEEEEEEE-EETT--EEEEEEEETTSSEEEEEEEETT
T ss_pred eecCCCCCCCCeeEEEEEECCCCCce-------EEecCCCCcceEEEEEEe-CCCC--EEEEEEecccCCeEEEEEEECC
Confidence 788999886 542 011111134566889999 9995 566543 36789999999
Q ss_pred CCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 247 SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+++...............+..++|+|||+++++++.||.++||.+.
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 321 SNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp TCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 8874433322111111145689999999999999999988888764
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.9e-23 Score=162.62 Aligned_cols=241 Identities=9% Similarity=0.037 Sum_probs=174.1
Q ss_pred CceeEEEEEeecCCCceEEEEeec-------CCeEEEEEcCCccccceecccCcceEEEEeCCCCCc-eEEEeeCCCcEE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGI-------NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS-LVVSASKDESVR 79 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~i~ 79 (294)
...+..++|+ |+|+ ++++++. ++.|.+||..+++....+.. ...+..++|+| +++ ++++...++.|.
T Consensus 40 ~~~~~~~~~s--~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 40 GKGAYEMAYS--QQEN-ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTVNSAVT 114 (353)
T ss_dssp ESSEEEEEEE--TTTT-EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETTTTEEE
T ss_pred ccCccceEEC--CCCC-EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecCCCEEE
Confidence 3557788887 8998 6666663 57899999999988887764 34578899999 666 556666689999
Q ss_pred EEEcCCCceEEEeeccCCCC------CceeEEEEecCCCceEEeee--cCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 80 LWNVQTGICILIFAGAGGHR------NEVLSVDFHPSDIYRIASCG--MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~------~~v~~l~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
+||..+++.+..+....+.. ..+.+++|+| ++..+++++ .++.|.+||+.+.
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~------------------- 174 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNI------------------- 174 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTT-------------------
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCC-------------------
Confidence 99999999888776311110 1278999999 666565554 4789999999873
Q ss_pred ceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec----CCCCeeEEEEccc
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV----PECDIWFIKFSCD 225 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~ 225 (294)
.....+..+...+..+.|+ ++++++++.++.|.+||+.+++ ....... +...+..++|+|+
T Consensus 175 ----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 175 ----KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK---------ILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp ----EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE---------EEEEEECCCSSSCCCEEEEEEETT
T ss_pred ----ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe---------EEEEEEcCCCCCCcccceEEECCC
Confidence 2233333344557778886 7889998999999999998764 3333333 3456778999999
Q ss_pred CCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEe-ccCCcEEEEecCC
Q 022590 226 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC-CEDGAIWRWDAIP 293 (294)
Q Consensus 226 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vw~~~~ 293 (294)
++ .++++...++.|.+||+.+++........ . ...++|+|+|++++.+ ..++.|.+||+.+
T Consensus 242 g~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-----~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 242 RQ-RAFITDSKAAEVLVVDTRNGNILAKVAAP-----E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp TT-EEEEEESSSSEEEEEETTTCCEEEEEECS-----S-CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CC-EEEEEeCCCCEEEEEECCCCcEEEEEEcC-----C-CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 95 24444555699999999988744333321 1 2569999999966554 4789999999864
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1.2e-23 Score=163.54 Aligned_cols=251 Identities=10% Similarity=0.061 Sum_probs=164.0
Q ss_pred CceeEEEEEeecCCCceEEEEeec--CCeEEEEEcCCcc--ccceecccCcceEEEEeCCCCCceEEEee-CCCcEEEEE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSAS-KDESVRLWN 82 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd 82 (294)
......++|+ |+|+ +++++.. ++.|.+|++.+++ .+..+..+...+..++|+| ++++|++++ .++.|.+|+
T Consensus 39 ~~~p~~~a~s--pdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 39 TQNPTYLALS--AKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp CSCCCCEEEC--TTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred cCCcceEEEc--cCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 3445567776 9998 5555543 6899999997765 3444455778899999999 888777777 789999999
Q ss_pred cCC-Cc--eEEEeeccC------CCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 83 VQT-GI--CILIFAGAG------GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 83 ~~~-~~--~~~~~~~~~------~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
+.. +. .+..+.... .+...+.+++|+| +++++++...++.|++|++.....
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~------------------- 174 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQ------------------- 174 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSC-------------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCc-------------------
Confidence 963 32 222222100 0123488999999 666777777788999999983110
Q ss_pred eeeceEEeec-CCCceeeccee--cceEEE-eeCCCeEEEecCCCCCCCCCCCCceeeeeeecCC------CCeeEEEEc
Q 022590 154 VQFPVFIASV-HSNYVDCNRWL--GDFILS-KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE------CDIWFIKFS 223 (294)
Q Consensus 154 ~~~~~~~~~~-~~~~i~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~ 223 (294)
......... .......++|+ ++++++ ...++.|.+|++..... ............ ..+..++|+
T Consensus 175 -~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 175 -LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG-----AFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp -EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT-----EEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred -EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC-----ceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 000111111 12245567776 665555 56788999999874211 111222222222 347889999
Q ss_pred ccCCcceE-EEEcCCCeEEEEeccCC-CceeeeeccccccCCCeEEEEEccCCCEEEEecc-CCcEEEEecC
Q 022590 224 CDFHYNAA-AIGNREGKIFVWELQSS-PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE-DGAIWRWDAI 292 (294)
Q Consensus 224 ~~~~~~~l-~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~vw~~~ 292 (294)
|+++ +| ++...++.|.+|++... +......+. .+...+..++|+|+|++|++++. ++.|.+|++.
T Consensus 249 pdG~--~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 249 HDGH--FLYVSNRGYNTLAVFAVTADGHLTLIQQIS--TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTSC--EEEEEEETTTEEEEEEECGGGCEEEEEEEE--CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCC--EEEEEeCCCCEEEEEEECCCCcEEEeEEEe--cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9995 45 56667899999999733 222333333 33456889999999998888765 4899999664
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=4.7e-24 Score=165.00 Aligned_cols=233 Identities=10% Similarity=0.008 Sum_probs=163.6
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-c----CcceEEEEeCCCCCceEEEee-----------
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-H----GDSINEIRTQPLKPSLVVSAS----------- 73 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~l~s~~----------- 73 (294)
.+..++|+ |+|+.+++++..++.|.+||+.+++.+..+.. + ...+..++|+| ++++|+++.
T Consensus 35 ~~~~~~~s--~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVA--PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEEC--TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEc--CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC-CCCEEEEEeccccccccccc
Confidence 46778887 99974556777789999999999888776653 1 23678899999 887888775
Q ss_pred -CCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCc
Q 022590 74 -KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 152 (294)
Q Consensus 74 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
.++.|.+||+.+++.+..+. ....+.+++|+| ++.+|+++ ++.|.+||+.+.....
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~----~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~---------------- 168 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFE----APRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVE---------------- 168 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEE----CCSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEE----------------
T ss_pred ccCceEEEEECCCCcEEEEEe----CCCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEee----------------
Confidence 57999999999988887776 345688899999 77777776 6899999998743211
Q ss_pred eeeeceEEeecCC--CceeecceecceEEEeeC-CC-----------------------eEEEecCCCCCCCCCCCCcee
Q 022590 153 YVQFPVFIASVHS--NYVDCNRWLGDFILSKSV-DN-----------------------EIVLWEPKMKEQSPGEGTADI 206 (294)
Q Consensus 153 ~~~~~~~~~~~~~--~~i~~~~~~~~~l~~~~~-d~-----------------------~i~iwd~~~~~~~~~~~~~~~ 206 (294)
.+..+. .++ .+..++..++..+. ++ .|.+||+.+++. .
T Consensus 169 -------~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--------~ 232 (337)
T 1pby_B 169 -------DKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM--------A 232 (337)
T ss_dssp -------EECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE--------E
T ss_pred -------eeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc--------e
Confidence 111111 111 11112332322221 11 578999987652 1
Q ss_pred eeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcE
Q 022590 207 LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286 (294)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 286 (294)
......+...+..++|+|+++ +++++ ++.|++||+.+.+... .+. ....+.+++|+|+|++|++++.++.|
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~--~l~~~--~~~v~~~d~~~~~~~~--~~~---~~~~~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKT--RAFGA--YNVLESFDLEKNASIK--RVP---LPHSYYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSS--EEEEE--ESEEEEEETTTTEEEE--EEE---CSSCCCEEEECTTSCEEEEESBSSEE
T ss_pred EeecCCCCCceeeEEECCCCC--EEEEe--CCeEEEEECCCCcCcc--eec---CCCceeeEEECCCCCEEEEEcCCCcE
Confidence 223344456688899999994 66666 6999999998875332 222 12457899999999999999999999
Q ss_pred EEEecCC
Q 022590 287 WRWDAIP 293 (294)
Q Consensus 287 ~vw~~~~ 293 (294)
++||+++
T Consensus 304 ~v~d~~~ 310 (337)
T 1pby_B 304 AAYDAET 310 (337)
T ss_dssp EEEETTT
T ss_pred EEEECcC
Confidence 9999864
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1.4e-23 Score=162.10 Aligned_cols=235 Identities=12% Similarity=0.034 Sum_probs=165.5
Q ss_pred CCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee-CCCcEEEEEcCCCce-EEEeeccCC
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS-KDESVRLWNVQTGIC-ILIFAGAGG 97 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~-~~~~~~~~~ 97 (294)
++++..+++.+.++.|.+||..+++....+..+...+ .++|+| +++++++++ .++.|.+||+.+++. ...+. .
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~ 81 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ---E 81 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEE---E
T ss_pred CCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecc---c
Confidence 5555478888999999999999999888887777777 999999 777555554 489999999999987 66665 3
Q ss_pred CCCceeEEEEecCCCceEEeeecCC---cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee
Q 022590 98 HRNEVLSVDFHPSDIYRIASCGMDN---TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL 174 (294)
Q Consensus 98 ~~~~v~~l~~~~~~~~~l~~~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 174 (294)
+..+..+++|+| ++.+++++..++ .|.+||+.+.. ....+.. .....++.|+
T Consensus 82 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~-----------------------~~~~~~~-~~~~~~~~~s 136 (331)
T 3u4y_A 82 GQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNK-----------------------FISTIPI-PYDAVGIAIS 136 (331)
T ss_dssp CSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTE-----------------------EEEEEEC-CTTEEEEEEC
T ss_pred CCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCC-----------------------eEEEEEC-CCCccceEEC
Confidence 555555599999 888777655553 89999998732 2222222 3345677886
Q ss_pred --cceEEE-eeCCCe-EEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc
Q 022590 175 --GDFILS-KSVDNE-IVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 250 (294)
Q Consensus 175 --~~~l~~-~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 250 (294)
++++++ ...++. |.+|++...... .............+..++|+|+++ .+++++..++.|++||+.+++.
T Consensus 137 pdg~~l~~~~~~~~~~i~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 137 PNGNGLILIDRSSANTVRRFKIDADGVL-----FDTGQEFISGGTRPFNITFTPDGN-FAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TTSSCEEEEEETTTTEEEEEEECTTCCE-----EEEEEEEECSSSSEEEEEECTTSS-EEEEEETTTTEEEEEECSSTTS
T ss_pred CCCCEEEEEecCCCceEEEEEECCCCcE-----eecCCccccCCCCccceEECCCCC-EEEEEeCCCCeEEEEECCCCcc
Confidence 555554 455578 999999854310 001012223345678999999995 3556666789999999998764
Q ss_pred ee-eeeccccccCCCeEEEEEccCCCEEEEe-ccCCcEEEEecCC
Q 022590 251 VL-IARLSHAQSKSPIRQTAMSYDGSTILSC-CEDGAIWRWDAIP 293 (294)
Q Consensus 251 ~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vw~~~~ 293 (294)
.. ...+. ....+..++|+|+|++|+.+ ..++.|.+||+++
T Consensus 211 ~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 211 ITLLNAVG---TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp CEEEEEEE---CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred cceeeecc---CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 11 22332 22567889999999977655 4578899999864
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=3.2e-24 Score=170.90 Aligned_cols=166 Identities=21% Similarity=0.232 Sum_probs=123.5
Q ss_pred cCceeEEEEEeecCCCceEEE----EeecCCeEEEEEcCCc--------cc---cceecccCcceEEEEeCCCCCceEEE
Q 022590 7 KEESFYTVSWACNVDGIPFLV----AGGINGIIRVIDVSNE--------KL---HKSFVGHGDSINEIRTQPLKPSLVVS 71 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~----~~~~dg~i~iw~~~~~--------~~---~~~~~~h~~~v~~~~~~~~~~~~l~s 71 (294)
+...|++++|+ |+|+ +|+ +|+.|+.|+|||+.++ +. ...+.+|...|++++|+|.++.+|++
T Consensus 91 ~~~~v~~l~~s--pdg~-~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 91 MKFPIHHLALS--CDNL-TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp CSSCEEEEEEC--TTSC-EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CCCcccEEEEc--CCCC-EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 44579999998 8998 888 7889999999998765 11 34566799999999999954889999
Q ss_pred eeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 72 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 72 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
++.||+|++||++++....... +|...|.+++|+| ++.+|++|+.||.|++||++. ......
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~---~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~~-~~~~~~------------- 229 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATL---PSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPTL-QEKKVI------------- 229 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEE---CGGGCEEEEEECT-TSSCEEEEETTSCEEEECTTC-CEEEEE-------------
T ss_pred EECCCeEEEEEcCCCcceeecc---CCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccCC-cccccc-------------
Confidence 9999999999999887665555 5889999999999 899999999999999999983 110000
Q ss_pred ceeeeceEEeecCCCceeecceecc--eEEE-eeCCC------eEEEecCCCCC
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWLGD--FILS-KSVDN------EIVLWEPKMKE 196 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~-~~~d~------~i~iwd~~~~~ 196 (294)
..+......|...+.++.|+++ ++++ ...+| .+++|+++...
T Consensus 230 ---~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 230 ---PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp ---CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ---cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 0000000123457889999833 3322 33343 38999998653
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=2.8e-24 Score=163.16 Aligned_cols=223 Identities=11% Similarity=0.055 Sum_probs=159.7
Q ss_pred EeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC-CceEEEeeccCCC-CCceeEE
Q 022590 28 AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT-GICILIFAGAGGH-RNEVLSV 105 (294)
Q Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~-~~~v~~l 105 (294)
.++.|+.|++||+.+++.. .+..|...|.+++|+| ++++|++++ ++.|.+||+.+ ++...... .+ ...+.++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDT---GFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCC---TTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEecc---ccccccccce
Confidence 3467899999999888765 4556889999999999 888888876 78999999998 77765554 34 4788999
Q ss_pred EEecCCCceEEeee--cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEE-E
Q 022590 106 DFHPSDIYRIASCG--MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFIL-S 180 (294)
Q Consensus 106 ~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~-~ 180 (294)
+|+| ++.+|++++ .++...+|.++... . ....+..+ ..+..+.|+ ++.++ +
T Consensus 91 ~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~---------------------~-~~~~~~~~-~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 91 GISP-DGALYAISDKVEFGKSAIYLLPSTG---------------------G-TPRLMTKN-LPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp EECT-TSSEEEEEECTTTSSCEEEEEETTC---------------------C-CCEECCSS-SSEEEEEECTTSSEEEEE
T ss_pred EECC-CCCEEEEEEeCCCCcceEEEEECCC---------------------C-ceEEeecC-CCccceEECCCCCEEEEE
Confidence 9999 888888888 44566666664311 0 01112222 236677776 66666 7
Q ss_pred eeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE-EcCCCeEEEEeccCCCceeeeecccc
Q 022590 181 KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI-GNREGKIFVWELQSSPPVLIARLSHA 259 (294)
Q Consensus 181 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~ 259 (294)
+..++.+++|++..... ....+..+...+..+.|+|+++ .++. +..++.+++|++..... ....+.
T Consensus 147 ~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~i~~~~~~~~-~~~~~~-- 213 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSG--------VETRLTHGEGRNDGPDYSPDGR--WIYFNSSRTGQMQIWRVRVDGS-SVERIT-- 213 (297)
T ss_dssp EEETTEEEEEEEETTTC--------CEEECCCSSSCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTSS-CEEECC--
T ss_pred ECCCCceEEEEEECCCC--------cceEcccCCCccccceECCCCC--EEEEEecCCCCccEEEECCCCC-CcEEEe--
Confidence 78899999998653221 2344455567789999999994 5554 44689999999873321 222333
Q ss_pred ccCCCeEEEEEccCCCEEEEeccC-----------CcEEEEecCC
Q 022590 260 QSKSPIRQTAMSYDGSTILSCCED-----------GAIWRWDAIP 293 (294)
Q Consensus 260 ~~~~~v~~~~~s~~~~~l~s~~~d-----------g~i~vw~~~~ 293 (294)
.+...+..++|+|+|++|++++.+ +.|++||+++
T Consensus 214 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 445678999999999999988776 5699999864
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=8.1e-23 Score=158.42 Aligned_cols=232 Identities=10% Similarity=0.058 Sum_probs=155.8
Q ss_pred EEEEeecCCeEEEEEcCC-c--cccceecccCcceEEEEeCCCCCceEEEeeCC-CcEEEEEcC--CCce--EEEeeccC
Q 022590 25 FLVAGGINGIIRVIDVSN-E--KLHKSFVGHGDSINEIRTQPLKPSLVVSASKD-ESVRLWNVQ--TGIC--ILIFAGAG 96 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~-~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~--~~~~--~~~~~~~~ 96 (294)
++++++.|+.|++|+++. + +.+.. ..|...+.+++|+| ++++|++++.+ +.|.+|++. +++. +..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--- 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA--- 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccc---
Confidence 455557899999999953 3 22333 34777899999999 88888888776 999999997 5543 33343
Q ss_pred CCCCceeEEEEecCCCceEEeee-cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee-
Q 022590 97 GHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL- 174 (294)
Q Consensus 97 ~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 174 (294)
....+..++|+| ++.+|++++ .++.|.+||+..... ........ ....+.++.|+
T Consensus 82 -~~~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~--------------------~~~~~~~~-~~~~~~~~~~s~ 138 (343)
T 1ri6_A 82 -LPGSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLP--------------------VGVVDVVE-GLDGCHSANISP 138 (343)
T ss_dssp -CSSCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEE--------------------EEEEEEEC-CCTTBCCCEECT
T ss_pred -cCCCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcc--------------------cccccccc-CCCCceEEEECC
Confidence 233789999999 777665554 588999999942100 11222222 33457788887
Q ss_pred -cceEEEee-CCCeEEEecCCC-CCCCCCCCCceeee--eeec-CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC-
Q 022590 175 -GDFILSKS-VDNEIVLWEPKM-KEQSPGEGTADILQ--KYPV-PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS- 247 (294)
Q Consensus 175 -~~~l~~~~-~d~~i~iwd~~~-~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~- 247 (294)
++++++++ .++.|++||+.. ++ ..... .... ....+..++|+|+++ .+++++..++.|.+|++..
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~pdg~-~l~~~~~~~~~i~~~~~~~~ 210 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGH-------LVAQDPAEVTTVEGAGPRHMVFHPNEQ-YAYCVNELNSSVDVWELKDP 210 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSC-------EEEEEEEEEECSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEESSCT
T ss_pred CCCEEEEecCCCCEEEEEEecCCCc-------eeeecccccccCCCCCcceEEECCCCC-EEEEEeCCCCEEEEEEecCC
Confidence 66777776 899999999986 32 11111 2222 335688899999985 2445566899999999964
Q ss_pred -CCceeeeecc-cc---ccCCCeEEEEEccCCCEEE-EeccCCcEEEEecC
Q 022590 248 -SPPVLIARLS-HA---QSKSPIRQTAMSYDGSTIL-SCCEDGAIWRWDAI 292 (294)
Q Consensus 248 -~~~~~~~~~~-~~---~~~~~v~~~~~s~~~~~l~-s~~~dg~i~vw~~~ 292 (294)
++........ .. .....+..++|+|+|++|+ ++..++.|.+||++
T Consensus 211 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 211 HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 3322222221 00 1134577899999998887 45589999999987
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=2.4e-23 Score=161.78 Aligned_cols=237 Identities=12% Similarity=0.029 Sum_probs=163.1
Q ss_pred cCCCceEEEEeecCCeEEEEEcCCccccceecccC-cceEEEEeCCCCCce-EEEeeCCCcEEEEEcCCCceEEEeeccC
Q 022590 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHG-DSINEIRTQPLKPSL-VVSASKDESVRLWNVQTGICILIFAGAG 96 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 96 (294)
++++. ++++++.++.|++||..+++.+..+..+. ..+..++|+| +++. ++++..++.|.+||+.+++....+..
T Consensus 8 ~~~~~-~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~-- 83 (349)
T 1jmx_B 8 KAGHE-YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANL-- 83 (349)
T ss_dssp CTTCE-EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEES--
T ss_pred cCCCE-EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc--
Confidence 36776 89999999999999999998888776543 2578999999 6664 55666789999999999988777662
Q ss_pred CC-----CCceeEEEEecCCCceEEeeecC------------CcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 97 GH-----RNEVLSVDFHPSDIYRIASCGMD------------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 97 ~~-----~~~v~~l~~~~~~~~~l~~~~~d------------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
.+ ...+.+++|+| +++++++++.+ +.|.+||+.+.... ....
T Consensus 84 ~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--------------------~~~~ 142 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA--------------------KPVR 142 (349)
T ss_dssp CCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB--------------------CCSE
T ss_pred ccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCcccc--------------------ceee
Confidence 12 22378999999 88888888765 89999999873211 0111
Q ss_pred EeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCce-------------------------e------
Q 022590 160 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTAD-------------------------I------ 206 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~------ 206 (294)
.. .+...+.+++|+ ++ +++++. .|.+||+.+++......... .
T Consensus 143 ~~-~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T 1jmx_B 143 TF-PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR 218 (349)
T ss_dssp EE-ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred ec-cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeee
Confidence 11 233356777776 66 555443 49999998765311000000 0
Q ss_pred ----------------------------eeeeecCCCCeeEEEEcc-cCCcceEEEEcCCCeEEEEeccCCCceeeeecc
Q 022590 207 ----------------------------LQKYPVPECDIWFIKFSC-DFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 257 (294)
Q Consensus 207 ----------------------------~~~~~~~~~~i~~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 257 (294)
..........+..++++| ++ .+++++ ++.|.+||+.+.+.......
T Consensus 219 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg--~~l~~~--~~~v~~~d~~~~~~~~~~~~- 293 (349)
T 1jmx_B 219 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP--NQIYGV--LNRLAKYDLKQRKLIKAANL- 293 (349)
T ss_dssp C-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT--TEEEEE--ESEEEEEETTTTEEEEEEEC-
T ss_pred cCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC--CEEEEE--cCeEEEEECccCeEEEEEcC-
Confidence 000001122456778889 88 466666 88999999998753322221
Q ss_pred ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 258 HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 258 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
...+.+++|+|+|++|++++.++.|++||+++
T Consensus 294 ----~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 294 ----DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ----SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ----CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 23467899999999999888999999999864
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=7.4e-24 Score=175.72 Aligned_cols=231 Identities=11% Similarity=0.008 Sum_probs=162.6
Q ss_pred CceeEEEEEeecCCCceEEEEeec-CCeEEEEEcCCccccceecccC-cceEEEEeCCCCCceEEEeeC---CCcEEEEE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGI-NGIIRVIDVSNEKLHKSFVGHG-DSINEIRTQPLKPSLVVSASK---DESVRLWN 82 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd 82 (294)
..+|++++|+ |||+ .||+++. ||+++||++++++..+ +..|. ..+..++|+| + +++++++. +...++|.
T Consensus 21 ~~~~~~~~~~--~DG~-~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGV--VDGD-KLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEE--ETTT-EEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecC--CCCC-eEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCC-C-eEEEEeccCCCCcceEEEE
Confidence 5689999998 8999 8888776 9999999997666544 44444 6899999999 6 77777765 45567766
Q ss_pred cCC--CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 83 VQT--GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 83 ~~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
+.. ......+. ....+...+|+|++...+++.+.++.+.+||+.++. ....
T Consensus 95 ~~~~~~g~~~~l~----~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-----------------------~~~l 147 (582)
T 3o4h_A 95 VNTSRPGEEQRLE----AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG-----------------------LREL 147 (582)
T ss_dssp EETTSTTCCEECT----TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE-----------------------EEEE
T ss_pred EeccCCCcccccc----CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc-----------------------EEEe
Confidence 543 22222333 222345668888333444444455566699998732 1111
Q ss_pred eecCCCceeeccee--cceEEEeeCC----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 161 ASVHSNYVDCNRWL--GDFILSKSVD----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 161 ~~~~~~~i~~~~~~--~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
. .+.. .++.|+ |+++++++.+ +.|++||+.+++ ...+..+...+..++|+|++ ..|+++
T Consensus 148 ~-~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~----------~~~l~~~~~~~~~~~~SpDG--~~l~~~ 212 (582)
T 3o4h_A 148 A-RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----------LRVFDSGEGSFSSASISPGM--KVTAGL 212 (582)
T ss_dssp E-EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC----------CEEECCSSCEEEEEEECTTS--CEEEEE
T ss_pred e-cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC----------ceEeecCCCccccceECCCC--CEEEEc
Confidence 1 1222 555564 8999988777 789999998764 23445566778999999999 478888
Q ss_pred cCCC--eEEEEeccCCCceeeeeccccccCCCeEEEE--------EccCCCEEEEeccCCcEEEEec
Q 022590 235 NREG--KIFVWELQSSPPVLIARLSHAQSKSPIRQTA--------MSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 235 ~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
..++ .|++||+.+++.. .+. .+...+..++ |+|||.++++++.||.+++|++
T Consensus 213 ~~~~~~~i~~~d~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 213 ETAREARLVTVDPRDGSVE---DLE--LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECSSCEEEEEECTTTCCEE---ECC--CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cCCCeeEEEEEcCCCCcEE---Ecc--CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8888 8999999988643 222 4445566666 9999999999999999999986
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.6e-22 Score=157.46 Aligned_cols=227 Identities=12% Similarity=0.094 Sum_probs=165.4
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCc---------ceEEEEeCCCCCceEEEee--CCCcE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD---------SINEIRTQPLKPSLVVSAS--KDESV 78 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~--~dg~i 78 (294)
.+..++|+ |+|+.++++...++.|.+||..+++.+..+..+.. .+.+++|+| +++.+++++ .++.|
T Consensus 90 ~~~~~~~s--~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 90 KPFGATIN--NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVI 166 (353)
T ss_dssp CCCSEEEE--TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEE
T ss_pred CcceEEEC--CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceE
Confidence 45667776 89984555666689999999999988877765432 278899999 766666555 47899
Q ss_pred EEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
.+||..+++.+..+. .+...+.+++|+| ++..+++++.++.|.+||+.+... .
T Consensus 167 ~~~d~~~~~~~~~~~---~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~-----------------------~ 219 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQ---NTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKI-----------------------L 219 (353)
T ss_dssp EEEETTTTEEEEEEC---CCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEE-----------------------E
T ss_pred EEEcCCCCceEEEec---CCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeE-----------------------E
Confidence 999999999888776 3555688999999 888888888899999999987421 1
Q ss_pred EEee----cCCCceeeccee--cceEEEee-CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceE
Q 022590 159 FIAS----VHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 231 (294)
Q Consensus 159 ~~~~----~~~~~i~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 231 (294)
.... .+...+..++|+ ++++++++ .++.|.+||+.+++ .+..+.... ...++|+|+++ .++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---------~~~~~~~~~--~~~~~~s~dg~-~l~ 287 (353)
T 3vgz_A 220 SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN---------ILAKVAAPE--SLAVLFNPARN-EAY 287 (353)
T ss_dssp EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC---------EEEEEECSS--CCCEEEETTTT-EEE
T ss_pred EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc---------EEEEEEcCC--CceEEECCCCC-EEE
Confidence 1211 244556677776 66666555 45999999998765 344444332 25689999995 355
Q ss_pred EEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC
Q 022590 232 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 283 (294)
Q Consensus 232 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 283 (294)
++...++.|.+||..+++.... +.. ...+.+++|+|+|++|+.+..+
T Consensus 288 v~~~~~~~v~~~d~~~~~~~~~--~~~---~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKSYKVVKT--FDT---PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEE--EEC---CSEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCCeEEEEECCCCeEEEE--Eec---CCCCCeEEEcCCCCEEEEEEcc
Confidence 5566799999999988764333 321 2357999999999977776555
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.9e-24 Score=183.69 Aligned_cols=237 Identities=11% Similarity=0.044 Sum_probs=166.2
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCc---ceEEEEeCCCCCceEEEeeCC---------C
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD---SINEIRTQPLKPSLVVSASKD---------E 76 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~d---------g 76 (294)
..+.+++|+ |||+ ++++ +.||.|++||+.+++....+..|.. .|.+++|+| ++++|++++.+ +
T Consensus 17 ~~~~~~~~s--pdg~-~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWI--SDTE-FIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBS--SSSC-BCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEc--CCCc-EEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeeccee
Confidence 346677887 9998 6766 7899999999999988877777665 499999999 89999988764 7
Q ss_pred cEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 77 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 77 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
.+.+||+.+++. ..+....+|...+..++|+| +++.|+.++. +.|++||+.++..
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~---------------------- 146 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQA---------------------- 146 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCC----------------------
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCce----------------------
Confidence 788999998876 34443334556689999999 8888888875 7999999987321
Q ss_pred ceEEeecCCC------------------ceeeccee--cceEEEeeCCC-------------------------------
Q 022590 157 PVFIASVHSN------------------YVDCNRWL--GDFILSKSVDN------------------------------- 185 (294)
Q Consensus 157 ~~~~~~~~~~------------------~i~~~~~~--~~~l~~~~~d~------------------------------- 185 (294)
......+.. .+.++.|+ |+.|++++.++
T Consensus 147 -~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 225 (723)
T 1xfd_A 147 -IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSEN 225 (723)
T ss_dssp -EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCC
T ss_pred -EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCC
Confidence 111111111 23667776 77888776543
Q ss_pred ---eEEEecCCCCCCCCCCCCceeeeeeec------CCCCeeEEEEcccCCcceEEEEc----CCCeEEEEeccCCCcee
Q 022590 186 ---EIVLWEPKMKEQSPGEGTADILQKYPV------PECDIWFIKFSCDFHYNAAAIGN----REGKIFVWELQSSPPVL 252 (294)
Q Consensus 186 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~ 252 (294)
.|++||+.+++. ...+.. +...+..++|+|+++ ++++.. .+..|++||+.+++...
T Consensus 226 ~~~~l~~~d~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 226 PSISLHVIGLNGPTH---------DLEMMPPDDPRMREYYITMVKWATSTK--VAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp CEEEEEEEESSSSCC---------CEECCCCCCGGGSSEEEEEEEESSSSE--EEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred CeeEEEEEECCCCce---------eEEeeCCccCCCccceeEEEEEeCCCe--EEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 789999887652 112222 245678899999994 665543 33679999999886433
Q ss_pred eeeccccccCCCe----EEEEEccCCCEEEE--eccCC------cEEEEe
Q 022590 253 IARLSHAQSKSPI----RQTAMSYDGSTILS--CCEDG------AIWRWD 290 (294)
Q Consensus 253 ~~~~~~~~~~~~v----~~~~~s~~~~~l~s--~~~dg------~i~vw~ 290 (294)
.... .+...+ ..++|+|||+.|+. +..++ .|++||
T Consensus 295 ~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 295 KHED---ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEE---ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EEEe---ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 3222 122223 37899999997775 44666 466776
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.8e-22 Score=171.12 Aligned_cols=245 Identities=11% Similarity=0.103 Sum_probs=168.9
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCC-----ccccceecccCcc--------------eEEEEeCCCCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-----EKLHKSFVGHGDS--------------INEIRTQPLKP 66 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~h~~~--------------v~~~~~~~~~~ 66 (294)
.+...+.+++|+ |||+ +|+++ .++.|++|++.+ ++.......+... +.+++|+| ++
T Consensus 118 ~~~~~~~~~~~S--pdG~-~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg 192 (706)
T 2z3z_A 118 DTNEETASLDFS--PVGD-RVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KG 192 (706)
T ss_dssp CCTTCCTTCEEC--TTSS-EEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TS
T ss_pred CCcccccCCcCC--CCCC-EEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC-CC
Confidence 345667788887 9999 77774 689999999998 7766544444332 48999999 88
Q ss_pred ceEEEee---------------------------------CCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCc
Q 022590 67 SLVVSAS---------------------------------KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY 113 (294)
Q Consensus 67 ~~l~s~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 113 (294)
++|++++ .+..|.+||+.+++...... ...|...+.+++|+| +++
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~sp-dg~ 270 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-GEPKEKFLTNLSWSP-DEN 270 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-CSCTTCEEEEEEECT-TSS
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-CCCCceeEeeEEEEC-CCC
Confidence 9998887 44679999998887654332 124677899999999 888
Q ss_pred eEEeeecCC-----cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC---ceeecce----ecceEEEe
Q 022590 114 RIASCGMDN-----TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN---YVDCNRW----LGDFILSK 181 (294)
Q Consensus 114 ~l~~~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~----~~~~l~~~ 181 (294)
.|++++.++ .|++||+.++... ..+. ...+.. .+..+.| ++++++++
T Consensus 271 ~l~~~~~~~~~~~~~v~~~d~~~g~~~--------------------~~~~-~~~~~~~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 271 ILYVAEVNRAQNECKVNAYDAETGRFV--------------------RTLF-VETDKHYVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEE--------------------EEEE-EEECSSCCCCCSCCEECTTCSSEEEEEE
T ss_pred EEEEEEeCCCCCeeEEEEEECCCCcee--------------------eEEE-EccCCCeECccCCceeecCCCCEEEEEE
Confidence 888887776 8999999874110 0010 011111 2345556 46688888
Q ss_pred eCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeE-EEEcccCCcceEEEEcCCC----eEEEEeccCCCceeeeec
Q 022590 182 SVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF-IKFSCDFHYNAAAIGNREG----KIFVWELQSSPPVLIARL 256 (294)
Q Consensus 182 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~ 256 (294)
..++.+++|++.... ..+..+..+...+.. ++|+|+++ .+++++..++ .|..||+.+++. ..+
T Consensus 330 ~~~g~~~l~~~~~~~--------~~~~~l~~~~~~v~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~~~~---~~l 397 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTG--------RLIRQVTKGEWEVTNFAGFDPKGT-RLYFESTEASPLERHFYCIDIKGGKT---KDL 397 (706)
T ss_dssp CTTSSCEEEEEETTS--------CEEEECCCSSSCEEEEEEECTTSS-EEEEEESSSCTTCBEEEEEETTCCCC---EES
T ss_pred ccCCccEEEEEECCC--------CEEEecCCCCeEEEeeeEEcCCCC-EEEEEecCCCCceEEEEEEEcCCCCc---eec
Confidence 889999999876211 134445555556766 79999985 3445555555 677777766542 222
Q ss_pred cccccCCCeEEEEEccCCCEEEEeccC----CcEEEEecCC
Q 022590 257 SHAQSKSPIRQTAMSYDGSTILSCCED----GAIWRWDAIP 293 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~vw~~~~ 293 (294)
. +...+.+++|+|+|++|+..+.+ +.|++||+++
T Consensus 398 ~---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 398 T---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp C---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred c---CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 2 34568999999999988876443 5699999864
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=2.5e-22 Score=170.69 Aligned_cols=239 Identities=11% Similarity=0.024 Sum_probs=155.4
Q ss_pred eeEEEEEeecCCCceEEEEeecC---------CeEEEEEcCCccc--cceecccCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGIN---------GIIRVIDVSNEKL--HKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~d---------g~i~iw~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
.|.+++|+ |||+ +|++++.+ +.|.+||+.+++. +.....|...+..++|+| +++.|+.++. +.|
T Consensus 62 ~v~~~~~S--pDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i 136 (723)
T 1xfd_A 62 RAIRYEIS--PDRE-YALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNI 136 (723)
T ss_dssp TCSEEEEC--TTSS-EEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEE
T ss_pred ccceEEEC--CCCC-EEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECC-CCCEEEEEEC-CeE
Confidence 48888887 9999 88888764 7889999998875 222234555689999999 8888998876 799
Q ss_pred EEEEcCCCceEEEeeccCCCCCc------------------eeEEEEecCCCceEEeeecCC------------------
Q 022590 79 RLWNVQTGICILIFAGAGGHRNE------------------VLSVDFHPSDIYRIASCGMDN------------------ 122 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~------------------v~~l~~~~~~~~~l~~~~~dg------------------ 122 (294)
.+||+.+++...... .+... +.+++|+| +++.|++++.|+
T Consensus 137 ~~~~~~~g~~~~~~~---~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~ 212 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVS---TGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPT 212 (723)
T ss_dssp EEESSSSSCCEEEEC---CCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCC
T ss_pred EEEECCCCceEEEec---CCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCc
Confidence 999999888766554 23332 37899999 888888877553
Q ss_pred ----------------cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec------CCCceeeccee--cceE
Q 022590 123 ----------------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV------HSNYVDCNRWL--GDFI 178 (294)
Q Consensus 123 ----------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~--~~~l 178 (294)
.|++||+.+.. ....+.. +...+..+.|+ |+++
T Consensus 213 ~~~~~~~~~G~~~~~~~l~~~d~~~~~-----------------------~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l 269 (723)
T 1xfd_A 213 VKPYHYPKAGSENPSISLHVIGLNGPT-----------------------HDLEMMPPDDPRMREYYITMVKWATSTKVA 269 (723)
T ss_dssp CEEEECCBTTSCCCEEEEEEEESSSSC-----------------------CCEECCCCCCGGGSSEEEEEEEESSSSEEE
T ss_pred ceeccCCCCCCCCCeeEEEEEECCCCc-----------------------eeEEeeCCccCCCccceeEEEEEeCCCeEE
Confidence 45555554421 0111222 35667788887 6677
Q ss_pred EEeeC----CCeEEEecCCCCCCCCCCCCceeeeeee-cCCCCe----eEEEEcccCCcceEE-EEcCCC------eEEE
Q 022590 179 LSKSV----DNEIVLWEPKMKEQSPGEGTADILQKYP-VPECDI----WFIKFSCDFHYNAAA-IGNREG------KIFV 242 (294)
Q Consensus 179 ~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~i----~~~~~~~~~~~~~l~-~~~~dg------~i~i 242 (294)
++... +..|++||+.+++. ..... .+...+ ..++|+|+++. +++ ++..++ .|.+
T Consensus 270 ~~~~~~~~~~~~i~~~d~~~g~~---------~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~l~~ 339 (723)
T 1xfd_A 270 VTWLNRAQNVSILTLCDATTGVC---------TKKHEDESEAWLHRQNEEPVFSKDGRK-FFFIRAIPQGGRGKFYHITV 339 (723)
T ss_dssp EEEEETTSCEEEEEEEETTTCCE---------EEEEEEECSSCCCCCCCCCEECTTSCS-EEEEEEECCSSSSCEEEEEE
T ss_pred EEEEcCCCCeEEEEEEeCCCCcc---------eEEEEeccCCEEeccCCCceEcCCCCe-EEEEEecccCCCcceeEEEE
Confidence 66543 35799999987642 22211 122222 36799999962 333 356677 5666
Q ss_pred Ee-ccCCCceeeeeccccccCCCeEE-EEEccCCCEEEEeccC---CcEEEEecC
Q 022590 243 WE-LQSSPPVLIARLSHAQSKSPIRQ-TAMSYDGSTILSCCED---GAIWRWDAI 292 (294)
Q Consensus 243 ~d-~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~i~vw~~~ 292 (294)
|| ...++......+. .+...+.. ++|+|+|+.|+..+.+ +.+++|++.
T Consensus 340 ~d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 340 SSSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EeccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 77 3333210022222 22233444 6999999999765544 789999875
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=2e-22 Score=171.74 Aligned_cols=237 Identities=13% Similarity=0.080 Sum_probs=166.0
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc--ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
.|.+++|+ |||+ +|++++. +.|++||+.++. ....+..|...+..++|+| ++++|+.++. +.|.+||+.+++
T Consensus 110 ~v~~~~~S--pDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~~-~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWS--PDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIRG-RNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEEC--TTSS-EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEET-TEEEEEETTTTE
T ss_pred CcceeEEC--CCCC-EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEeC-CcEEEEecCCCC
Confidence 47888887 9999 8888876 899999998873 4556777888999999999 8898888874 689999998887
Q ss_pred eEEEeeccCCCCCc----------------eeEEEEecCCCceEEeeecCC-----------------------------
Q 022590 88 CILIFAGAGGHRNE----------------VLSVDFHPSDIYRIASCGMDN----------------------------- 122 (294)
Q Consensus 88 ~~~~~~~~~~~~~~----------------v~~l~~~~~~~~~l~~~~~dg----------------------------- 122 (294)
...... .+... +.++.|+| +++.|++++.|+
T Consensus 184 ~~~~~~---~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 184 QMQLTA---DGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp EEECCC---CCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred EEEecc---CCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 655443 23222 47899999 888888887765
Q ss_pred ----cEEEEeccc-cccccccceeecCCCCCCCCceeeeceEEeecCCCceeecce-ecceEEEeeC-----CCeEEEec
Q 022590 123 ----TVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-LGDFILSKSV-----DNEIVLWE 191 (294)
Q Consensus 123 ----~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~-----d~~i~iwd 191 (294)
.|++||+.+ .... .+.....|...+..++| +|++|++++. +..|++||
T Consensus 260 ~~~~~l~~~d~~~~~~~~---------------------~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 260 NVQVKLGVISPAEQAQTQ---------------------WIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp CCEEEEEEECSSTTCCCE---------------------EECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEE
T ss_pred CCeeEEEEEECCCCCceE---------------------EecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEE
Confidence 677777664 3210 00000135566666666 4667776553 56799999
Q ss_pred CCCCCCCCCCCCceeeeeeecCCC----CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEE
Q 022590 192 PKMKEQSPGEGTADILQKYPVPEC----DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQ 267 (294)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~ 267 (294)
+.+++. ......+.. .+..++|+|+++ ++++++.+|.+++|.+..... ...+. .+...+..
T Consensus 319 ~~~g~~---------~~~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~~~~~~--~~~l~--~~~~~v~~ 383 (741)
T 2ecf_A 319 LASNQQ---------RVLAHETSPTWVPLHNSLRFLDDGS--ILWSSERTGFQHLYRIDSKGK--AAALT--HGNWSVDE 383 (741)
T ss_dssp TTTCCE---------EEEEEEECSSCCCCCSCCEECTTSC--EEEEECTTSSCEEEEECSSSC--EEESC--CSSSCEEE
T ss_pred CCCCce---------EEEEEcCCCCcCCcCCceEECCCCe--EEEEecCCCccEEEEEcCCCC--eeeee--ecceEEEe
Confidence 987652 222222221 345789999994 888889999888888763322 33333 45567877
Q ss_pred E-EEccCCCEEE-EeccCC--cEEEEecC
Q 022590 268 T-AMSYDGSTIL-SCCEDG--AIWRWDAI 292 (294)
Q Consensus 268 ~-~~s~~~~~l~-s~~~dg--~i~vw~~~ 292 (294)
+ .|+|+|+.|+ +++.++ .+++|++.
T Consensus 384 ~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 384 LLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 7 5999998775 455555 89999875
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=7.9e-22 Score=152.47 Aligned_cols=225 Identities=11% Similarity=0.102 Sum_probs=157.5
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCc--ceEEEEeCCCCCc-eEEEeeCCCcEEEEEcCCCceEEEeeccC--CCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGD--SINEIRTQPLKPS-LVVSASKDESVRLWNVQTGICILIFAGAG--GHR 99 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~ 99 (294)
++++++.++.|.+||+.+++.+..+..... .+..++|+| +++ +++++..++.|.+||+.+++.+..+.... .|.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 799999999999999999988877763322 588999999 665 45666778999999999999887766310 012
Q ss_pred CceeEEEEecCCCceEEeee------------cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 100 NEVLSVDFHPSDIYRIASCG------------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 100 ~~v~~l~~~~~~~~~l~~~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
..+.+++|+| ++.+++++. .++.|.+||+.+.. ....+.. ...
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-----------------------~~~~~~~-~~~ 136 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-----------------------RRKAFEA-PRQ 136 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-----------------------EEEEEEC-CSS
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCc-----------------------EEEEEeC-CCC
Confidence 2678899999 777777775 57999999998632 1222222 334
Q ss_pred eeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC-------
Q 022590 168 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG------- 238 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg------- 238 (294)
+..+.|+ +++++++ ++.|.+||+.+++ ....+..... ...+.|+|++. .+++++..++
T Consensus 137 ~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~---------~~~~~~~~~~-~~~~~~s~dg~-~l~~~~~~~~~~~~~~~ 203 (337)
T 1pby_B 137 ITMLAWARDGSKLYGL--GRDLHVMDPEAGT---------LVEDKPIQSW-EAETYAQPDVL-AVWNQHESSGVMATPFY 203 (337)
T ss_dssp CCCEEECTTSSCEEEE--SSSEEEEETTTTE---------EEEEECSTTT-TTTTBCCCBCC-CCCCCCTTTTEEEEEEE
T ss_pred cceeEECCCCCEEEEe--CCeEEEEECCCCc---------Eeeeeecccc-CCCceeCCCcc-EEeeeccCCCceeeeee
Confidence 5666775 6777776 6889999998764 3333333220 11236788885 2223333333
Q ss_pred ----------------eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 239 ----------------KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 239 ----------------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.|.+||+.+++.. .... ..+...+.+++|+|+|++|+++ ++.|++||+++
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~--~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 204 TARKDIDPADPTAYRTGLLTMDLETGEMA-MREV--RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp EEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE--EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccccccccccccccccceEEEeCCCCCce-Eeec--CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 4689999988743 2222 2455678899999999999988 79999999864
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=7.6e-22 Score=173.72 Aligned_cols=243 Identities=11% Similarity=0.024 Sum_probs=180.5
Q ss_pred ccCc-eeEEEEEeecCCCceEEEEeecCCeEE-EEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 6 QKEE-SFYTVSWACNVDGIPFLVAGGINGIIR-VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 6 ~h~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~-iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
.|.+ .+..++|+ +|+ .|+.++.++.+. +|++.+++... +.+|...+..++|+| ++++|++++.++.|++||+
T Consensus 334 ~~~~~~~~~~~~s---dg~-~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 334 EPLRIRYVRRGGD---TKV-AFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp CCSCEEEEEECSS---SEE-EEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred CCCcceEEeeeEc---CCC-eEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECC-CCCEEEEECCCCeEEEEEC
Confidence 4455 77888875 787 788888888888 99988776543 447888999999999 8999999999999999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC----------cEEEEeccccccccccceeecCCCCCCCCce
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN----------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg----------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
.+++....+. +|...+.+++|+| ++.+|++++.++ .|++||+.+.
T Consensus 408 ~tg~~~~~~~---~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g--------------------- 462 (1045)
T 1k32_A 408 ETGKPTVIER---SREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR--------------------- 462 (1045)
T ss_dssp TTCCEEEEEE---CSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---------------------
T ss_pred CCCceEEecc---CCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCC---------------------
Confidence 9998877775 5888999999999 888888877654 8999999872
Q ss_pred eeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCC--------------------------------
Q 022590 154 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSP-------------------------------- 199 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~-------------------------------- 199 (294)
. ...+..|...+..+.|+ |++|+.++.++...+|+........
T Consensus 463 --~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (1045)
T 1k32_A 463 --K-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE 539 (1045)
T ss_dssp --E-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCC
T ss_pred --c-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcccccccc
Confidence 1 34455566777778886 7889988888877777754322100
Q ss_pred --CCCCceeeeeeecCCCCeeEEEEcccCCcceEEE-------------EcCCCeEEEEeccCCCceeeeeccccccCCC
Q 022590 200 --GEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI-------------GNREGKIFVWELQSSPPVLIARLSHAQSKSP 264 (294)
Q Consensus 200 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~-------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 264 (294)
.......+..+..+...+..+.++|++ .++++ ......|.+||+.+++..... ..
T Consensus 540 ~d~~g~~~~~~~l~~~~~~~~~~~~s~dg--~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--------~~ 609 (1045)
T 1k32_A 540 YDLNDMYKRSSPINVDPGDYRMIIPLESS--ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--------NN 609 (1045)
T ss_dssp CCCTTGGGGCEECSCCCBCEEEEEECSSE--EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE--------EE
T ss_pred ccccCHhHceEEcCCCCCChhheEEcCCC--eEEEEecccCcccccccccCCCceEEEEECCCCcEEEee--------cC
Confidence 000011223334455678899999998 45554 123557888998887632221 34
Q ss_pred eEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 265 IRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 265 v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
+..++|||||++|++++.+ .|++||+.+
T Consensus 610 v~~~~~S~DG~~l~~~~~~-~i~~~d~~~ 637 (1045)
T 1k32_A 610 LTDLRLSADRKTVMVRKDD-GKIYTFPLE 637 (1045)
T ss_dssp EEEEEECTTSCEEEEEETT-SCEEEEESS
T ss_pred cceEEECCCCCEEEEEcCC-cEEEEeCcc
Confidence 7899999999999999766 799999865
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=3.2e-21 Score=150.61 Aligned_cols=256 Identities=12% Similarity=0.047 Sum_probs=157.7
Q ss_pred CceeEEEEEeecCCCceEEEEeecC----CeEEEEEcCC--ccc--cceecccCcceEEEEeCCCCCceEEEe-eCCCcE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGIN----GIIRVIDVSN--EKL--HKSFVGHGDSINEIRTQPLKPSLVVSA-SKDESV 78 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~--~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~dg~i 78 (294)
......++|+ |+|+ +|++++.+ +.|.+|+++. ++. +.....+......+++ ++++|+++ ..++.|
T Consensus 49 ~~~p~~l~~s--pdg~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 49 VANPSYLIPS--ADGK-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGGSI 122 (361)
T ss_dssp CSCCCSEEEC--TTSS-EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTTEE
T ss_pred CCCCceEEEC--CCCC-EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCCEE
Confidence 3445556776 9998 88888875 8999999865 332 3333445566777887 34455554 468999
Q ss_pred EEEEcCCCceEEEe----ec-------cCCCCCceeEEEEecCCCceE-EeeecCCcEEEEeccccccccccceeecCCC
Q 022590 79 RLWNVQTGICILIF----AG-------AGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLP 146 (294)
Q Consensus 79 ~vwd~~~~~~~~~~----~~-------~~~~~~~v~~l~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 146 (294)
.+|++.....+..+ .. ...+...+.+++|+| +++++ ++...++.|.+|++..........
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~------- 194 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKE------- 194 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCC-------
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCccccc-------
Confidence 99999754332211 10 001233468899999 77655 445558899999988632100000
Q ss_pred CCCCCceeeeceEEeecCCCceeeccee--cceEEEee-CCCeEEEecCCCCCCCCCCCCceeeeeee---cCCCCeeEE
Q 022590 147 SKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYP---VPECDIWFI 220 (294)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~ 220 (294)
..............+......++|+ ++++++++ .++.|.+||+.++.. ..+.... .+......+
T Consensus 195 ---~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~-------~~~~~~~~~~~~~~~~~~i 264 (361)
T 3scy_A 195 ---KFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML-------DEIQTVAADTVNAQGSGDI 264 (361)
T ss_dssp ---CCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE-------EEEEEEESCSSCCCCEEEE
T ss_pred ---ceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce-------EEeEEEecCCCCCCCcccE
Confidence 0000000011122233456677886 66776666 689999999985421 1222222 223456789
Q ss_pred EEcccCCcceEEEEc-C-CCeEEEEecc--CCCceeeeeccccccCCCeEEEEEccCCCEEEEec-cCCcEEEEecC
Q 022590 221 KFSCDFHYNAAAIGN-R-EGKIFVWELQ--SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 292 (294)
Q Consensus 221 ~~~~~~~~~~l~~~~-~-dg~i~i~d~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~ 292 (294)
+|+|+++ +|+++. . ++.|.+|++. +++......+. . ...+..++|+|+|++|++++ .++.|.+|++.
T Consensus 265 ~~spdg~--~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~--~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 265 HLSPDGK--YLYASNRLKADGVAIFKVDETNGTLTKVGYQL--T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EECTTSS--EEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCC--EEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999995 565544 4 5899999996 34433333332 2 35678999999999888877 67899998765
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1e-21 Score=166.53 Aligned_cols=239 Identities=10% Similarity=0.077 Sum_probs=164.5
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC---
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT--- 85 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--- 85 (294)
..|.+++|+ |+ + .++.+ .++.|++||+.+++... +..+...+.+++|+| +++.|+++ .|+.|.+||+.+
T Consensus 82 ~~v~~~~~s--pd-~-~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDA--GR-G-LVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEET--TT-T-EEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEEC--CC-C-eEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccc
Confidence 568899987 88 5 45444 35999999998876544 445677899999999 88888885 679999999988
Q ss_pred --CceEEEeeccCCCCCc--------------eeEEEEecCCCceEEeee------------------------------
Q 022590 86 --GICILIFAGAGGHRNE--------------VLSVDFHPSDIYRIASCG------------------------------ 119 (294)
Q Consensus 86 --~~~~~~~~~~~~~~~~--------------v~~l~~~~~~~~~l~~~~------------------------------ 119 (294)
++...... .+... +.++.|+| ++++|++++
T Consensus 154 ~~g~~~~~~~---~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 154 GMSRAIAVTI---DGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CCCCCEESCS---CCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cCCCcEEecc---CCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 77655433 22222 58999999 888888887
Q ss_pred ---cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCC-----eEEE
Q 022590 120 ---MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN-----EIVL 189 (294)
Q Consensus 120 ---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~-----~i~i 189 (294)
.+..|++||+.+... ..+.....|...+..+.|+ ++.|++++.++ .|.+
T Consensus 230 ~~~~~~~l~~~d~~~~~~---------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~ 288 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKT---------------------VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA 288 (706)
T ss_dssp SCCCEEEEEEEETTTTEE---------------------EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred CCCCeeEEEEEECCCCce---------------------EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE
Confidence 346788899876321 0111112466778889997 77888877765 8999
Q ss_pred ecCCCCCCCCCCCCceeeeeeecC--CCCeeEEEEcc--cCCcceEEEEcCCCeEEEEecc-CCCceeeeeccccccCCC
Q 022590 190 WEPKMKEQSPGEGTADILQKYPVP--ECDIWFIKFSC--DFHYNAAAIGNREGKIFVWELQ-SSPPVLIARLSHAQSKSP 264 (294)
Q Consensus 190 wd~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~--~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~ 264 (294)
||+.+++. ...+...... ...+..+.|+| ++ .+++++..+|.+++|++. +++ ....+. .+...
T Consensus 289 ~d~~~g~~------~~~~~~~~~~~~~~~~~~~~~sp~~dg--~~l~~~~~~g~~~l~~~~~~~~--~~~~l~--~~~~~ 356 (706)
T 2z3z_A 289 YDAETGRF------VRTLFVETDKHYVEPLHPLTFLPGSNN--QFIWQSRRDGWNHLYLYDTTGR--LIRQVT--KGEWE 356 (706)
T ss_dssp EETTTCCE------EEEEEEEECSSCCCCCSCCEECTTCSS--EEEEEECTTSSCEEEEEETTSC--EEEECC--CSSSC
T ss_pred EECCCCce------eeEEEEccCCCeECccCCceeecCCCC--EEEEEEccCCccEEEEEECCCC--EEEecC--CCCeE
Confidence 99987631 1111111111 11245689999 88 588899999999999887 332 233333 44566
Q ss_pred eEE-EEEccCCCEEEEec-cCC----cEEEEecC
Q 022590 265 IRQ-TAMSYDGSTILSCC-EDG----AIWRWDAI 292 (294)
Q Consensus 265 v~~-~~~s~~~~~l~s~~-~dg----~i~vw~~~ 292 (294)
+.. ++|+|+|+.|+.++ .++ .|+.||+.
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 776 79999999876554 444 56666654
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=9.9e-21 Score=148.00 Aligned_cols=250 Identities=9% Similarity=-0.041 Sum_probs=159.7
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcC-Cccccceeccc-CcceEEEEeCCCCCc--eEEEee------------
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVS-NEKLHKSFVGH-GDSINEIRTQPLKPS--LVVSAS------------ 73 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~--~l~s~~------------ 73 (294)
.+..++|+ |+|+ +|++++.+ .|.+|++. +++........ .+.+..++|+| +++ +++++.
T Consensus 41 ~~~~~a~s--pdg~-~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 41 PISWMTFD--HERK-NIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCSEEEEC--TTSS-EEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCcEEEEC--CCCC-EEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceee
Confidence 56677776 9998 88888887 99999997 77654433211 12356799999 777 355553
Q ss_pred -CCCcEEEEEcC-CCceEEEeecc-CCCCCceeEEEEecCCCceEEeee-cCCcEEEEecc-ccccccccceeecCCCCC
Q 022590 74 -KDESVRLWNVQ-TGICILIFAGA-GGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMK-EFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 74 -~dg~i~vwd~~-~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~-~~~~~~~~~~~~~~~~~~ 148 (294)
.+|++.+|++. .++....+... ..+...+.+++|+| ++++++++. .++.|++||+. ++..
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~-------------- 180 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEV-------------- 180 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCE--------------
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCE--------------
Confidence 68999999997 46554433311 02456799999999 777777665 46799999997 4211
Q ss_pred CCCceeeeceEEee--cCCCceeeccee--cceEEEeeC-CCeEEEecCCC--CCCCCCCCCceeeeeeecC----CC--
Q 022590 149 FPTKYVQFPVFIAS--VHSNYVDCNRWL--GDFILSKSV-DNEIVLWEPKM--KEQSPGEGTADILQKYPVP----EC-- 215 (294)
Q Consensus 149 ~~~~~~~~~~~~~~--~~~~~i~~~~~~--~~~l~~~~~-d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~----~~-- 215 (294)
....... .|...+..+.|+ ++++++++. ++.|.+|++.. ++... ....+..++.. ..
T Consensus 181 -------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~---~~~~~~~~~~~~~g~~~~~ 250 (365)
T 1jof_A 181 -------ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY---THHSFPLIPPGIPDRDPET 250 (365)
T ss_dssp -------EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE---EEEEEESSCTTCCCBCTTT
T ss_pred -------EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE---ccceEEcCCCCcCCccccc
Confidence 0111122 234567778886 777777664 78999997653 32100 00011111111 11
Q ss_pred ----CeeEEE-EcccCCcceEEEEcC-CC-----eEEEEecc-CCCceeee-eccccccCCCeEEEEEcc---CCCEEEE
Q 022590 216 ----DIWFIK-FSCDFHYNAAAIGNR-EG-----KIFVWELQ-SSPPVLIA-RLSHAQSKSPIRQTAMSY---DGSTILS 279 (294)
Q Consensus 216 ----~i~~~~-~~~~~~~~~l~~~~~-dg-----~i~i~d~~-~~~~~~~~-~~~~~~~~~~v~~~~~s~---~~~~l~s 279 (294)
.+..++ |+|+++ +|+++.. ++ .|.+|++. +++..... ... .+...+..++|+| +|++|++
T Consensus 251 ~~~~~~~~i~~~spdG~--~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~--~~~~~~~~~a~sp~~~dg~~l~v 326 (365)
T 1jof_A 251 GKGLYRADVCALTFSGK--YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP--TPTSGGHSNAVSPCPWSDEWMAI 326 (365)
T ss_dssp SSBSEEEEEEEECTTSS--EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE--CSSCCTTCCCEEECTTCTTEEEE
T ss_pred ccccccccEEEECCCCC--EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeee--cCCCCcccceecCCCcCCCEEEE
Confidence 477899 999995 5555543 22 89999996 44422211 121 2234467789999 8999999
Q ss_pred eccC-CcEEEEecCC
Q 022590 280 CCED-GAIWRWDAIP 293 (294)
Q Consensus 280 ~~~d-g~i~vw~~~~ 293 (294)
++.+ +.|.+|+++.
T Consensus 327 ~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 327 TDDQEGWLEIYRWKD 341 (365)
T ss_dssp ECSSSCEEEEEEEET
T ss_pred EEcCCCeEEEEEEch
Confidence 8865 8999999864
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.4e-21 Score=171.95 Aligned_cols=229 Identities=13% Similarity=-0.012 Sum_probs=174.6
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-----------cCcceEEEEeC-CCCCceEEEeeCCCc
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-----------HGDSINEIRTQ-PLKPSLVVSASKDES 77 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------h~~~v~~~~~~-~~~~~~l~s~~~dg~ 77 (294)
.+...+|+ |+|+ +|+.+ .++.|.+|++...+ +..+.. |...+.+++|+ | +++.|++++ ++.
T Consensus 246 ~~~~~~~S--pDG~-~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~ 318 (1045)
T 1k32_A 246 DYYPRHLN--TDGR-RILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQ 318 (1045)
T ss_dssp SSCEEEEE--ESSS-CEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTE
T ss_pred CcceeeEc--CCCC-EEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCE
Confidence 35667777 8998 77776 58999999984443 334444 44579999999 9 888888887 789
Q ss_pred EEEEEcCCCceEEEeeccCCCCC-ceeEEEEecCCCceEEeeecCCcEE-EEeccccccccccceeecCCCCCCCCceee
Q 022590 78 VRLWNVQTGICILIFAGAGGHRN-EVLSVDFHPSDIYRIASCGMDNTVK-IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 78 i~vwd~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~~l~~~~~dg~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
|.+|++..++... +. .|.. .+..++|+ ++..|+.++.++.+. +||+...
T Consensus 319 i~~~~~~~~~~~~-~~---~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~----------------------- 369 (1045)
T 1k32_A 319 AFIQDVSGTYVLK-VP---EPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTG----------------------- 369 (1045)
T ss_dssp EEEECTTSSBEEE-CS---CCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTC-----------------------
T ss_pred EEEEcCCCCceEE-cc---CCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCC-----------------------
Confidence 9999998776544 33 4777 89999999 667788888788888 8888762
Q ss_pred eceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEE
Q 022590 156 FPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 233 (294)
. ...+..|...+..++|+ +++|++++.++.|++||+.+++ .......+...+..++|+|++ .+|++
T Consensus 370 ~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~---------~~~~~~~~~~~v~~~~~SpDG--~~la~ 437 (1045)
T 1k32_A 370 K-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK---------PTVIERSREAMITDFTISDNS--RFIAY 437 (1045)
T ss_dssp C-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------EEEEEECSSSCCCCEEECTTS--CEEEE
T ss_pred C-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc---------eEEeccCCCCCccceEECCCC--CeEEE
Confidence 1 12223667788888887 8899999999999999998765 334444677778899999999 46777
Q ss_pred EcCC----------CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 234 GNRE----------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 234 ~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
++.+ +.|++||+.+++ ...+. .+...+..++|+|+|++|++++.++...+|+.
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~--~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK---IFAAT--TENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE---EEECS--CSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred EecCccccccCCCCCeEEEEECCCCc---EEEee--CCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 6654 489999998864 23333 55567889999999999999998888777764
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=3.4e-20 Score=144.03 Aligned_cols=243 Identities=9% Similarity=0.065 Sum_probs=151.0
Q ss_pred EEEEee----cCCeEEEEEcC--Cccccc-eecccCcceEEEEeCCCCCceEEEeeC---CCcEEEEEcCCCce--EEEe
Q 022590 25 FLVAGG----INGIIRVIDVS--NEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASK---DESVRLWNVQTGIC--ILIF 92 (294)
Q Consensus 25 ~l~~~~----~dg~i~iw~~~--~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~--~~~~ 92 (294)
.+++|+ .++.|.+|.++ +++... ....+...+..++|+| +++ |++++. ++.|.+|++.+++. +..+
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~sp-dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 81 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSA-KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV 81 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECT-TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEcc-CCe-EEEEEecCCCceEEEEEecCCcEEEeeee
Confidence 455553 35568887765 444332 2334567788999999 777 554443 68999999976653 3332
Q ss_pred eccCCCCCceeEEEEecCCCceEEeee-cCCcEEEEecccccc-ccccceeecCCCCCCCCceeeeceEEeecCCCceee
Q 022590 93 AGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWT-YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 170 (294)
Q Consensus 93 ~~~~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 170 (294)
. .+...+..++|+| ++.+|++++ .++.+.+|++..... ............ +. ...+...+.+
T Consensus 82 ~---~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~----------p~--~~~~~~~~~~ 145 (347)
T 3hfq_A 82 V---APGTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHG----------PR--PEQDGSHIHY 145 (347)
T ss_dssp E---EESCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCC----------SS--TTCSSCCEEE
T ss_pred e---cCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCC----------CC--ccccCCCceE
Confidence 3 3677889999999 777777776 789999999964111 000000000000 00 0012234667
Q ss_pred ccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC
Q 022590 171 NRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 247 (294)
Q Consensus 171 ~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 247 (294)
++|+ ++++++...++.|.+||+.... .......... ....+..++|+|+++ .+++++..++.|.+|++..
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g------~~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAG------QLSEQSVLTMEAGFGPRHLVFSPDGQ-YAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTS------CEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEEET
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCC------cEEEeeeEEcCCCCCCceEEECCCCC-EEEEEeCCCCEEEEEEecC
Confidence 7776 6666666678899999998321 1112222222 234677899999995 2455567889999999985
Q ss_pred --CCceeeeeccccc----cCCCeEEEEEccCCCEEE-EeccCCcEEEEecC
Q 022590 248 --SPPVLIARLSHAQ----SKSPIRQTAMSYDGSTIL-SCCEDGAIWRWDAI 292 (294)
Q Consensus 248 --~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~-s~~~dg~i~vw~~~ 292 (294)
++........... ....+..++|+|+|++|+ +...++.|.+|++.
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 3322222222111 114588999999999875 55568999999986
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=3e-19 Score=134.92 Aligned_cols=239 Identities=13% Similarity=0.097 Sum_probs=167.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec------ccCcceEEEEeCCCCCceEEEeeC-CCcEE
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV------GHGDSINEIRTQPLKPSLVVSASK-DESVR 79 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~-dg~i~ 79 (294)
+-....+++++ ++|+ ++++...++.|.+||.+ ++....+. ++...+..+++.+.++.++++... ++.|.
T Consensus 28 ~~~~p~~v~~~--~~g~-l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 28 QFTEPSGVAVN--AQND-IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp CBSCEEEEEEC--TTCC-EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred ccCCCceEEEC--CCCC-EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 44567888886 8898 88888889999999976 55555543 244578999994327777766643 78999
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
+|| .+++.+..+.. .+...+.+++++| +++++++...++.|.+||.... ...
T Consensus 104 ~~d-~~g~~~~~~~~--~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~------------------------~~~ 155 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGA--TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGN------------------------VLH 155 (286)
T ss_dssp EEC-TTSCEEEEECT--TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSC------------------------EEE
T ss_pred EEC-CCCcEEEEecC--ccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCC------------------------EEE
Confidence 999 56777766642 3446789999999 7787887777899999996541 011
Q ss_pred Ee--ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecC--CCCeeEEEEcccCCcceEEE
Q 022590 160 IA--SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP--ECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 160 ~~--~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~l~~ 233 (294)
.+ ..+...+..++++ ++++++...++.|++||.... .+..+... ...+..+++++++ .++++
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----------~~~~~~~~g~~~~p~~i~~d~~G--~l~v~ 223 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ----------YLRQIGGEGITNYPIGVGINSNG--EILIA 223 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC----------EEEEESCTTTSCSEEEEEECTTC--CEEEE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC----------EEEEEccCCccCCCcEEEECCCC--CEEEE
Confidence 11 1233456777776 667777777899999997432 23333332 2567899999988 57777
Q ss_pred EcCCC-eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 234 GNREG-KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 234 ~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
...++ .|.+||... + ....+........+.+++++|+|+++++ +.|+.|++|++..
T Consensus 224 ~~~~~~~i~~~~~~g-~--~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 224 DNHNNFNLTIFTQDG-Q--LISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ECSSSCEEEEECTTS-C--EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred eCCCCEEEEEECCCC-C--EEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 77675 999999643 3 2223321122234789999999987777 5799999999854
No 158
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=4.5e-19 Score=136.55 Aligned_cols=256 Identities=12% Similarity=0.066 Sum_probs=172.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecC------------------------CeEEEEEcCCccccceec-ccCcceEEEEe
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGIN------------------------GIIRVIDVSNEKLHKSFV-GHGDSINEIRT 61 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~d------------------------g~i~iw~~~~~~~~~~~~-~h~~~v~~~~~ 61 (294)
.-+.+.+++++ |+|+ ++++...+ +.|.+||..+++....+. ++-.....+++
T Consensus 22 ~l~~v~~va~d--~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALD--SKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEEC--TTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ecCCceEEEEC--CCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 34678899987 9998 77777776 479999998888776554 34457899999
Q ss_pred CCCCCceEEEeeCCCcEEEEEcCCCc-eEEEeecc------CCCCCceeEEEEecCCCceEEeee-cCCcEEEEeccccc
Q 022590 62 QPLKPSLVVSASKDESVRLWNVQTGI-CILIFAGA------GGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFW 133 (294)
Q Consensus 62 ~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~------~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~ 133 (294)
+| +++++++...++.|++||..... .+..+... .++-..+..++++|.++.++++.+ .++.|++|+....
T Consensus 99 d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~- 176 (329)
T 3fvz_A 99 DT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK- 176 (329)
T ss_dssp CT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-
T ss_pred CC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-
Confidence 99 88888888889999999985442 44444210 134457899999985677777775 6899999995431
Q ss_pred cccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee
Q 022590 134 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY 210 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 210 (294)
... .+........ ....+-.....++++ +.++++...++.|++||..+++ .+..+
T Consensus 177 ~~~--~~~~~g~~~~-----------~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~---------~~~~~ 234 (329)
T 3fvz_A 177 FVT--QWGEESSGSS-----------PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE---------FVREI 234 (329)
T ss_dssp EEE--EECEECCSSS-----------CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEE
T ss_pred EEE--EeccCCCCCC-----------CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEE
Confidence 100 0000000000 000122335677775 5667777788999999998554 34444
Q ss_pred e--cCCCCeeEEEEcc------cCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEecc
Q 022590 211 P--VPECDIWFIKFSC------DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 211 ~--~~~~~i~~~~~~~------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
. .....+..++++| ++ ...++...+..|++|+..+++...... ....+...+..++++|+|.++++...
T Consensus 235 ~~~~~~~~~~~~~~~pg~~~~~~g--~~~v~~~~~~~v~~~~~~~g~~~~~~~-~~~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 235 KHASFGRNVFAISYIPGFLFAVNG--KPYFGDQEPVQGFVMNFSSGEIIDVFK-PVRKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp CCTTTTTCEEEEEEETTEEEEEEC--CCCTTCSCCCCEEEEETTTCCEEEEEC-CSSSCCSSEEEEEECTTSEEEEEESS
T ss_pred eccccCCCcceeeecCCEEEEeCC--CEEeccCCCcEEEEEEcCCCeEEEEEc-CCCCccCCeeEEEECCCCCEEEEECC
Confidence 2 3445678888988 22 122223345589999998886433221 11245567899999999988888889
Q ss_pred CCcEEEEecC
Q 022590 283 DGAIWRWDAI 292 (294)
Q Consensus 283 dg~i~vw~~~ 292 (294)
++.|++|++.
T Consensus 312 ~~~I~~~~~~ 321 (329)
T 3fvz_A 312 TNTVWKFTLT 321 (329)
T ss_dssp SCCEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 9999999975
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=7.8e-22 Score=167.58 Aligned_cols=252 Identities=10% Similarity=0.083 Sum_probs=159.8
Q ss_pred EEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCc---ceEEEEeCCCCCceEEEeeC---------CCcEEE
Q 022590 13 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD---SINEIRTQPLKPSLVVSASK---------DESVRL 80 (294)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~~~---------dg~i~v 80 (294)
.++|+ |+|+ +++++ .|+.|++||+.+++....+..|.. .+.+++|+| ++++|++++. ++.|++
T Consensus 20 ~~~~s--~dg~-~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWI--SGQE-YLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEES--SSSE-EEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEEC--CCCe-EEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEE
Confidence 56776 9996 66655 699999999999988777766544 499999999 8899988876 789999
Q ss_pred EEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 81 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 81 wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
||+.+++.+.... ....+..++|+| +++.|+.+. ++.|++||+.++..... ... ......
T Consensus 95 ~d~~~g~~~~~~~----l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l---~~~-----------~~~~~v 154 (719)
T 1z68_A 95 YDLSNGEFVRGNE----LPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQI---TFN-----------GRENKI 154 (719)
T ss_dssp EETTTTEECCSSC----CCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEEC---CCC-----------CBTTTE
T ss_pred EECCCCcccccee----cCcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEE---ecC-----------CCcCCe
Confidence 9999887632111 234688999999 888888875 78999999987432110 000 000001
Q ss_pred eecCCCce---------eeccee--cceEEEeeCCC----------------------------------eEEEecCCCC
Q 022590 161 ASVHSNYV---------DCNRWL--GDFILSKSVDN----------------------------------EIVLWEPKMK 195 (294)
Q Consensus 161 ~~~~~~~i---------~~~~~~--~~~l~~~~~d~----------------------------------~i~iwd~~~~ 195 (294)
+.++...| .++.|+ |++|+.++.|. .|++||+.++
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~ 234 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP 234 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH
T ss_pred EcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC
Confidence 12333222 477786 78888877552 7889998865
Q ss_pred CCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC----CeEEEEe----ccCCCceeeeeccccccCCCeE-
Q 022590 196 EQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE----GKIFVWE----LQSSPPVLIARLSHAQSKSPIR- 266 (294)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~~~~~~~~~~v~- 266 (294)
+..... .......+..+...+..++|+|++ .++++.... ..|.+|| +.+++...........+...+.
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~~SpD~--~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (719)
T 1z68_A 235 AYVGPQ-EVPVPAMIASSDYYFSWLTWVTDE--RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGG 311 (719)
T ss_dssp HHHCCE-ECCCCHHHHTSCEEEEEEEESSSS--EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSS
T ss_pred Ccccee-EccCCccCCCCcceEEEeEEeCCC--eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEcc
Confidence 420000 000001122355668899999996 466663322 3488888 6665432222100013445555
Q ss_pred ----EEEEccCCCEEEE--eccCCc--EEEEecC
Q 022590 267 ----QTAMSYDGSTILS--CCEDGA--IWRWDAI 292 (294)
Q Consensus 267 ----~~~~s~~~~~l~s--~~~dg~--i~vw~~~ 292 (294)
.++|+|||+.|+. +..+|. |++||+.
T Consensus 312 ~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~ 345 (719)
T 1z68_A 312 FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT 345 (719)
T ss_dssp SSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC
T ss_pred ccCCccEECCCCCeEEEEEEccCCceEEEEEECC
Confidence 7899999996554 445664 6666654
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=2.3e-20 Score=158.81 Aligned_cols=250 Identities=12% Similarity=0.172 Sum_probs=158.6
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcc-----eEEEEeCCCCCceEEEeeCC-------
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS-----INEIRTQPLKPSLVVSASKD------- 75 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~s~~~d------- 75 (294)
......++|+ |+|+ +++++ ||.|++||+.+++....+.+|... ...++||| ++++|+.++.+
T Consensus 16 ~~~~~~~~w~--~dg~-~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 16 RLKLYSLRWI--SDHE-YLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCCEEEC--SSSE-EEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSC
T ss_pred cccccccEEC--CCCc-EEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEc
Confidence 3456788997 9997 88886 999999999999887777776543 24588999 88999988876
Q ss_pred --CcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 76 --ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 76 --g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
+.+.+||+.+++... +. .|...+...+|+| +++.||.+ .|+.|++|++..+.... ++..+
T Consensus 90 ~~~~~~~~d~~~~~~~~-l~---~~~~~~~~~~~SP-dG~~la~~-~~~~i~~~~~~~~~~~~---lt~~g--------- 151 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLIT-EE---RIPNNTQWVTWSP-VGHKLAYV-WNNDIYVKIEPNLPSYR---ITWTG--------- 151 (740)
T ss_dssp EEEEEEEEETTTTEECC-SS---CCCTTEEEEEECS-STTCEEEE-ETTEEEEESSTTSCCEE---CCSCC---------
T ss_pred cceEEEEEECCCCcEEE-cc---cCCCcceeeEECC-CCCEEEEE-ECCeEEEEECCCCceEE---EcCCC---------
Confidence 556799999887543 33 4778899999999 88888887 47899999997643211 00000
Q ss_pred eeeceEEeecCCCc---------eeeccee--cceEEEeeCCC------------------------------------e
Q 022590 154 VQFPVFIASVHSNY---------VDCNRWL--GDFILSKSVDN------------------------------------E 186 (294)
Q Consensus 154 ~~~~~~~~~~~~~~---------i~~~~~~--~~~l~~~~~d~------------------------------------~ 186 (294)
.....+.++... ...+.|+ |+.|+..+.|. .
T Consensus 152 --~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 152 --KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp --BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred --CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 000011122211 1234554 56666554221 4
Q ss_pred EEEecCCC---CCCCCCCCCceeeeeee------cCCCCeeEEEEcccCCcceEEEE----cCCCeEEEEeccCCC----
Q 022590 187 IVLWEPKM---KEQSPGEGTADILQKYP------VPECDIWFIKFSCDFHYNAAAIG----NREGKIFVWELQSSP---- 249 (294)
Q Consensus 187 i~iwd~~~---~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~l~~~----~~dg~i~i~d~~~~~---- 249 (294)
|++||+.+ ++.. ....+. .+...+..++|+|+++ .++.. ..+..|++||+.+++
T Consensus 230 l~v~d~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~wspdg~--~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNA-------TSIQITAPASMLIGDHYLCDVTWATQER--ISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp EEEEETTSCCSSSCC-------CEEEECCCHHHHTSCEEEEEEEEEETTE--EEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred EEEEECCCCCCCCcc-------eEEEecCCccCCCCCeEEEEEEEeCCCe--EEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 77788776 4210 011222 2455688899999994 44433 233479999999886
Q ss_pred ceeeeeccccccCCCeE-----EEEEccCCCEEE-Eec-cCC--cEEEEecC
Q 022590 250 PVLIARLSHAQSKSPIR-----QTAMSYDGSTIL-SCC-EDG--AIWRWDAI 292 (294)
Q Consensus 250 ~~~~~~~~~~~~~~~v~-----~~~~s~~~~~l~-s~~-~dg--~i~vw~~~ 292 (294)
......+....+...|. ..+|+|||+.|+ ..+ .+| .|++||+.
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp ECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred eeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 22222221113333333 688999999877 554 444 47777764
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=1.3e-17 Score=130.17 Aligned_cols=253 Identities=9% Similarity=0.025 Sum_probs=150.4
Q ss_pred EEEEee----cCCeEEEEEcC--CccccceecccCcceEEEEeCCCCCceEEEeeCC----CcEEEEEcCC--CceEEEe
Q 022590 25 FLVAGG----INGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD----ESVRLWNVQT--GICILIF 92 (294)
Q Consensus 25 ~l~~~~----~dg~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~--~~~~~~~ 92 (294)
+++.|+ .++.|.+|.++ +++.......+...+..++|+| ++++|++++.+ +.|.+|++.. ++. ..+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~-~~~ 92 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTL-HLL 92 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEE-EEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcE-EEe
Confidence 566664 45689999774 4544332222677888999999 88888888875 7999999875 332 222
Q ss_pred eccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecc
Q 022590 93 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNR 172 (294)
Q Consensus 93 ~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 172 (294)
.....+......+++ . +..++++...++.+.+|++................... ......+...+.++.
T Consensus 93 ~~~~~~~~~p~~~~~-d-g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~---------~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 93 NTQKTMGADPCYLTT-N-GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSG---------PDKERQTMPHLHCVR 161 (361)
T ss_dssp EEEECSSSCEEEEEE-C-SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCC---------SCTTTCSSCCEEEEE
T ss_pred eEeccCCCCcEEEEE-C-CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCC---------CCccccCCCcceEEE
Confidence 211134556777777 2 44444444578999999997532111110000000000 000011223356677
Q ss_pred ee--cceEEEee-CCCeEEEecCCCCCCCCCCCCcee----eeeeecCCCCeeEEEEcccCCcceEEEEc-CCCeEEEEe
Q 022590 173 WL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADI----LQKYPVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWE 244 (294)
Q Consensus 173 ~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~i~d 244 (294)
|+ +++++++. .++.|.+|++.............. ..........+..++|+|+++ ++++++ .++.|.+|+
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK--FAYLINEIGGTVIAFR 239 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTCEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC--EEEEEcCCCCeEEEEE
Confidence 76 66555544 588999998875431000000000 111223345678899999994 555544 789999999
Q ss_pred ccCCCceeeeecc-ccccCCCeEEEEEccCCCEEEEecc--CCcEEEEecC
Q 022590 245 LQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCE--DGAIWRWDAI 292 (294)
Q Consensus 245 ~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~--dg~i~vw~~~ 292 (294)
+.+++......+. ...+......++|+|||++|+++.. ++.|.+|++.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 240 YADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred ecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 9876533333332 2233455789999999999877655 4899999985
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=3.7e-19 Score=140.26 Aligned_cols=237 Identities=11% Similarity=0.029 Sum_probs=153.4
Q ss_pred EEEeecCCCceEEEEeec-CC--eEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEE
Q 022590 14 VSWACNVDGIPFLVAGGI-NG--IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICIL 90 (294)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 90 (294)
.+|+ |||+ +|+.++. +| .|.+||+.+++......++...+..++|+| +++.|+.++.++.|.+||+.+++...
T Consensus 41 ~~~S--pDg~-~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFT--RDGS-KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBC--TTSC-EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred ccCC--CCCC-EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCccee
Confidence 5666 9999 7777776 66 488889999888777777776666788999 88999999999999999999998776
Q ss_pred EeeccCCCCCceeEEE--EecCCCceEEe----------------------eecCCcEEEEeccccccccccceeecCCC
Q 022590 91 IFAGAGGHRNEVLSVD--FHPSDIYRIAS----------------------CGMDNTVKIWSMKEFWTYVEKSFTWTDLP 146 (294)
Q Consensus 91 ~~~~~~~~~~~v~~l~--~~~~~~~~l~~----------------------~~~dg~i~~wd~~~~~~~~~~~~~~~~~~ 146 (294)
.+. .+...+.... ++| ++.+++. ...+..|.+||+.++.
T Consensus 117 ~~~---~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~------------- 179 (388)
T 3pe7_A 117 VYQ---VPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE------------- 179 (388)
T ss_dssp EEE---CCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-------------
T ss_pred eee---chhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-------------
Confidence 665 3555554444 477 7776663 2244678889988632
Q ss_pred CCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCC------CeEEEecCCCCCCCCCCCCceeeeeeecCC--C
Q 022590 147 SKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVD------NEIVLWEPKMKEQSPGEGTADILQKYPVPE--C 215 (294)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~ 215 (294)
...+..+...+..+.|+ ++.|+....+ ..|.++|...... ..+..+. .
T Consensus 180 -----------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----------~~l~~~~~~~ 238 (388)
T 3pe7_A 180 -----------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM----------RKVKTHAEGE 238 (388)
T ss_dssp -----------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC----------EESCCCCTTE
T ss_pred -----------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce----------EEeeeCCCCc
Confidence 12233345566677775 4566665543 3688888765431 1122222 2
Q ss_pred CeeEEEEcccCCcceEEEEcCCC----eEEEEeccCCCceeeeeccccccC-CCeEEEEEccCCCEEEEe---------c
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREG----KIFVWELQSSPPVLIARLSHAQSK-SPIRQTAMSYDGSTILSC---------C 281 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~---------~ 281 (294)
.+....|+|+++ .+++.+..++ .|++||+.+++...........+. .....++|+|||+.|+.. .
T Consensus 239 ~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 239 SCTHEFWVPDGS-ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEECTTSS-CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred ccccceECCCCC-EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 466789999996 2323333222 399999999875444333210000 001223799999988854 4
Q ss_pred cCCcEEEEecCC
Q 022590 282 EDGAIWRWDAIP 293 (294)
Q Consensus 282 ~dg~i~vw~~~~ 293 (294)
.+..|++||+++
T Consensus 318 ~~~~i~~~d~~~ 329 (388)
T 3pe7_A 318 NDPFLYVFNMKN 329 (388)
T ss_dssp CCCEEEEEETTT
T ss_pred CCCEEEEEeccC
Confidence 566899999864
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.3e-19 Score=152.49 Aligned_cols=244 Identities=10% Similarity=0.027 Sum_probs=155.2
Q ss_pred eEEEEEeecCCCceEEEEeec---------CCeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCCCcEE
Q 022590 11 FYTVSWACNVDGIPFLVAGGI---------NGIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKDESVR 79 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~---------dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~ 79 (294)
|.+++|+ |||+ +|++++. ++.|++||+.+++.+ ..+ ...+..++|+| +++.|+.+. ++.|+
T Consensus 62 ~~~~~~S--pDg~-~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~ 133 (719)
T 1z68_A 62 ASNYGLS--PDRQ-FVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIY 133 (719)
T ss_dssp CSEEEEC--TTSS-EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEE
T ss_pred eeeEEEC--CCCC-eEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECC-CCCEEEEEE-CCeEE
Confidence 7788887 9999 8888776 789999999988763 222 25689999999 888888875 78999
Q ss_pred EEEcCCCceEEEeeccCCCCCce-----------------eEEEEecCCCceEEeeecCC--------------------
Q 022590 80 LWNVQTGICILIFAGAGGHRNEV-----------------LSVDFHPSDIYRIASCGMDN-------------------- 122 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v-----------------~~l~~~~~~~~~l~~~~~dg-------------------- 122 (294)
+|++.+++....... ++...| .+++|+| +++.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 134 LKQRPGDPPFQITFN--GRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EESSTTSCCEECCCC--CBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred EEeCCCCCcEEEecC--CCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 999988876543321 222222 5899999 888898887652
Q ss_pred --------------cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCC--
Q 022590 123 --------------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD-- 184 (294)
Q Consensus 123 --------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d-- 184 (294)
.|++||+.+........ ......+..|...+..++|+ +.++++....
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~ 275 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE---------------VPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ 275 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEE---------------CCCCHHHHTSCEEEEEEEESSSSEEEEEEEESST
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeE---------------ccCCccCCCCcceEEEeEEeCCCeEEEEEecccc
Confidence 56677776532100000 00001133577788889897 5555553322
Q ss_pred --CeEEEec----CCCCCCCCCCCCceeee-eeecCCCCee-----EEEEcccCCcceEEEEcCCC--eEEEEeccCCCc
Q 022590 185 --NEIVLWE----PKMKEQSPGEGTADILQ-KYPVPECDIW-----FIKFSCDFHYNAAAIGNREG--KIFVWELQSSPP 250 (294)
Q Consensus 185 --~~i~iwd----~~~~~~~~~~~~~~~~~-~~~~~~~~i~-----~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~ 250 (294)
..|.+|| +.+++.. .... ....+...+. .+.|+|+++..+++++..+| .|.+||+.+++.
T Consensus 276 ~~~~l~~~d~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~ 349 (719)
T 1z68_A 276 NVSVLSICDFREDWQTWDCP------KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA 349 (719)
T ss_dssp TEEEEEEEEECSSSSSEECC------GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC
T ss_pred CeEEEEEEcccCCCCCCceE------EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce
Confidence 2488899 6655421 1110 0123344444 67899999632333455555 566677766542
Q ss_pred eeeeeccccccCCCeEEEEEccCCCEEEEeccC-----CcEEEEecC
Q 022590 251 VLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAI 292 (294)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vw~~~ 292 (294)
..+. .+...+..+.++ +++.|+..+.+ +..++|.+.
T Consensus 350 ---~~lt--~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 350 ---IQIT--SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp ---EECS--CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ---Eecc--cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 2232 334457777777 77777665544 788899764
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=6.3e-19 Score=146.22 Aligned_cols=225 Identities=10% Similarity=0.055 Sum_probs=155.9
Q ss_pred ceeEEEEEeecCCCceEEEEeec---CCeEEEEEcCC---ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGI---NGIIRVIDVSN---EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
..+..++|+ || + ++++++. +...++|.+.. +... .+..+ ..+...+|+|+....+++.+.++.+.+||
T Consensus 65 ~~~~~~~~s--pd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d 138 (582)
T 3o4h_A 65 NSVLDPHYG--VG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYA 138 (582)
T ss_dssp SEECEECTT--CS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEE
T ss_pred cccccccCC--CC-e-EEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEE
Confidence 588899997 88 6 7887765 45566665533 2222 33322 23446678873333344444445556999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC----CcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
+.+++...... +.. .+++|+| +++.|++++.+ +.|++||+.++. .
T Consensus 139 ~~~g~~~~l~~----~~~--~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~------------------------~ 187 (582)
T 3o4h_A 139 LDGGGLRELAR----LPG--FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGG------------------------L 187 (582)
T ss_dssp EETTEEEEEEE----ESS--CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCC------------------------C
T ss_pred ccCCcEEEeec----CCC--ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCC------------------------c
Confidence 99887665554 322 8899999 89999988777 789999988631 2
Q ss_pred EEeecCCCceeeccee--cceEEEeeCCC--eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE--------EcccC
Q 022590 159 FIASVHSNYVDCNRWL--GDFILSKSVDN--EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK--------FSCDF 226 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~ 226 (294)
..+..|...+..++|+ |+.|+++..++ .|++||+.+++. . ....+...+..+. |+|++
T Consensus 188 ~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 188 RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV---------E-DLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE---------E-ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE---------E-EccCCCcChhhhhhccccceeEcCCC
Confidence 2456677888889997 88899888888 899999987652 2 3334444455555 99999
Q ss_pred CcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCc---EEEEecC
Q 022590 227 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA---IWRWDAI 292 (294)
Q Consensus 227 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~---i~vw~~~ 292 (294)
.++++++.+|.+++|++ ++. ... ....+.+++|+ +++++++++.+.. +++||..
T Consensus 258 --~~~~~~~~~g~~~l~~~--g~~--~~~-----~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 258 --RLAVVARREGRSAVFID--GER--VEA-----PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp --CEEEEEEETTEEEEEET--TEE--ECC-----CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred --cEEEEEEcCCcEEEEEE--CCe--ecc-----CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 58899999999999999 432 111 12568899999 9999998887754 6666653
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=1.4e-17 Score=130.20 Aligned_cols=235 Identities=9% Similarity=0.041 Sum_probs=148.5
Q ss_pred EEEEeecC--CeEEEEEc--CCccccce--ec-ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC-CCceEEEeeccC
Q 022590 25 FLVAGGIN--GIIRVIDV--SNEKLHKS--FV-GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ-TGICILIFAGAG 96 (294)
Q Consensus 25 ~l~~~~~d--g~i~iw~~--~~~~~~~~--~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 96 (294)
++++|+.. +.|.+|++ .+++.... .. .....+..++|+| ++++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~- 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP- 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE-
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEee-
Confidence 46666653 56888775 44543221 11 2334688999999 88889888887 99999997 77655433210
Q ss_pred CCCCceeEEEEecCCCc--eEEeee-------------cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 97 GHRNEVLSVDFHPSDIY--RIASCG-------------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 97 ~~~~~v~~l~~~~~~~~--~l~~~~-------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
.+ +.+.+++|+| +++ +++++. .+|.+.+|++...... ...+...
T Consensus 81 ~~-g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~-------------------~~~~~~~ 139 (365)
T 1jof_A 81 IG-GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL-------------------EKNVQNY 139 (365)
T ss_dssp CC-SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE-------------------EEEEEEE
T ss_pred cC-CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC-------------------cceEeeE
Confidence 11 2356789999 777 355553 6899999999741100 0011111
Q ss_pred -ecCCCceeeccee--cceEEEee-CCCeEEEecCC-CCCCCCCCCCceeeeeeec--CCCCeeEEEEcccCCcceEEEE
Q 022590 162 -SVHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPK-MKEQSPGEGTADILQKYPV--PECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 162 -~~~~~~i~~~~~~--~~~l~~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
..+...+.++.|+ |++++++. .++.|++||+. +++. ..+..... +...+..++|+|+++ +++++
T Consensus 140 ~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~-------~~~~~~~~~~~g~~p~~~~~spdg~--~l~v~ 210 (365)
T 1jof_A 140 EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-------ELVGSVDAPDPGDHPRWVAMHPTGN--YLYAL 210 (365)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-------EEEEEEECSSTTCCEEEEEECTTSS--EEEEE
T ss_pred EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE-------EEeeeEecCCCCCCCCEeEECCCCC--EEEEE
Confidence 1244567888887 67777665 46899999997 4431 12233332 356688999999994 56555
Q ss_pred c-CCCeEEEEeccC--CCcee----eeeccc--cccCC------CeEEEE-EccCCCEEEEeccCC------cEEEEecC
Q 022590 235 N-REGKIFVWELQS--SPPVL----IARLSH--AQSKS------PIRQTA-MSYDGSTILSCCEDG------AIWRWDAI 292 (294)
Q Consensus 235 ~-~dg~i~i~d~~~--~~~~~----~~~~~~--~~~~~------~v~~~~-~s~~~~~l~s~~~dg------~i~vw~~~ 292 (294)
. .++.|.+|++.. ++... ...+.. .++.. .+..++ |+|||++|++++.+. .|.+|++.
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 4 578999998763 43211 111211 11222 488999 999999988775432 89999985
No 166
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.82 E-value=6.9e-17 Score=120.87 Aligned_cols=237 Identities=10% Similarity=-0.003 Sum_probs=157.6
Q ss_pred eeEEEEEeecCCCceEEE-EeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 10 SFYTVSWACNVDGIPFLV-AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
...++++. ++|+ +++ +...++.|.+|+..+.........+...+.++++.+ +++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~--~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVD--SAGN-VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEEC--TTCC-EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEEC--CCCC-EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceE
Confidence 55677776 8898 666 557789999999766543322223345688999999 777666655 88999999866543
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
. .+.. .....+.++++.| ++.++++...++.|.+|+...... ..........+
T Consensus 100 ~-~~~~--~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~-----------------------~~~~~~~~~~p 152 (270)
T 1rwi_B 100 T-VLPF--DGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ-----------------------TVLPFTGLNDP 152 (270)
T ss_dssp E-ECCC--CSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSC-----------------------EECCCCSCCSC
T ss_pred e-eeec--CCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCcee-----------------------EeeccccCCCc
Confidence 3 2321 2335689999999 778777777788999997554211 00011122345
Q ss_pred eeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEecc
Q 022590 169 DCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 246 (294)
Q Consensus 169 ~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 246 (294)
..++++ ++++++...++.|.+||...... ..........+..+++.+++ .++++...++.|.+|+..
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~p~~i~~d~~g--~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ---------VVLPFTDITAPWGIAVDEAG--TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCE---------EECCCSSCCSEEEEEECTTC--CEEEEETTTSCEEEECTT
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCce---------EeecccCCCCceEEEECCCC--CEEEEECCCCcEEEEcCC
Confidence 566665 66666666788999999875431 11111222567889999988 567777778899999987
Q ss_pred CCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 247 SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
...... ... .+...+.+++++++|+++++...++.|+++++..
T Consensus 222 ~~~~~~---~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 222 STTSTV---LPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CSCCEE---CCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCccee---ecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 654221 111 2235689999999999888999999999998764
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=4.3e-17 Score=126.90 Aligned_cols=240 Identities=12% Similarity=0.034 Sum_probs=154.3
Q ss_pred EEEEeecCCCceEEEEee----------cCCeEEEEEcCCccccceeccc------CcceEEEEeCCCCCceEEEeeC--
Q 022590 13 TVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH------GDSINEIRTQPLKPSLVVSASK-- 74 (294)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~-- 74 (294)
.++|+ |+|+ +++++. .++.|.+||..+++.+.++... ......++++| ++++|+++..
T Consensus 54 ~i~~s--pdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVS--NDGK-KIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASP 129 (361)
T ss_dssp EEEEC--TTSS-EEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESS
T ss_pred ceEEC--CCCC-EEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCCC
Confidence 55555 9999 777765 3678999999998888777542 34567899999 8888888764
Q ss_pred CCcEEEEEcCCCceEEE-eeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCce
Q 022590 75 DESVRLWNVQTGICILI-FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 153 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (294)
+++|.+||+.+++.+.. +. +.. ...+.+.|.+...+++.+.||.+.+|++......... ..
T Consensus 130 ~~~v~v~d~~~~~~~~~~i~----~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~-~~------------ 191 (361)
T 2oiz_A 130 ATSIGIVDVAKGDYVEDVTA----AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQ-SR------------ 191 (361)
T ss_dssp SEEEEEEETTTTEEEEEEGG----GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEE-EE------------
T ss_pred CCeEEEEECCCCcEEEEEec----CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeee-cc------------
Confidence 68999999999988777 54 222 2335677755577888899999999998652111000 00
Q ss_pred eeeceEEeecCCCceee-cceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCC----------CCeeEEEE
Q 022590 154 VQFPVFIASVHSNYVDC-NRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE----------CDIWFIKF 222 (294)
Q Consensus 154 ~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----------~~i~~~~~ 222 (294)
....+.....++.. ...++..++..+.++.+.++|+..... .....+.... .....++|
T Consensus 192 ---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~-------~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 192 ---SKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEV-------KVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp ---CCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSC-------EEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred ---ccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCc-------eecccccccCccccccccccCCeeEEEE
Confidence 00001111111110 011245566667789999999875431 1111111100 11223789
Q ss_pred cccCCcceEEEEcC-----------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 223 SCDFHYNAAAIGNR-----------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 223 ~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
+|+++ .+++... .+.|.+||+.+.+ ....+. .+. +.+++|+|+|++|++++. +.|.+||.
T Consensus 262 ~~dg~--~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~--~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 262 HRASG--RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIP--GRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp ETTTT--EEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEE--CTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred ecCCC--eEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEe--cCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 99985 3333321 3589999999886 334443 222 899999999999999887 99999998
Q ss_pred CC
Q 022590 292 IP 293 (294)
Q Consensus 292 ~~ 293 (294)
++
T Consensus 333 ~t 334 (361)
T 2oiz_A 333 SQ 334 (361)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=9e-18 Score=130.36 Aligned_cols=217 Identities=13% Similarity=0.058 Sum_probs=138.8
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceeccc------CcceEEEEeCCCCCceEEEeeCC--------
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH------GDSINEIRTQPLKPSLVVSASKD-------- 75 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~d-------- 75 (294)
.+..++|+ |+|+.+++++..++.|.+||+.+++....+..+ ...+..++|+| ++++|++++.+
T Consensus 44 ~~~~~~~s--~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMA--PDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEEC--TTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCE
T ss_pred CCceeEEC--CCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC-CCCEEEEEccccccccccc
Confidence 46677886 999844556667899999999998877766533 23478999999 88888888865
Q ss_pred ----CcEEEEEcCCCce---EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCC-
Q 022590 76 ----ESVRLWNVQTGIC---ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS- 147 (294)
Q Consensus 76 ----g~i~vwd~~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~- 147 (294)
+.|.+||+.+++. +..+. +...+.+++|+| ++. +++++ +.|.+||+.++.............+.
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~ 192 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFP----MPRQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGY 192 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEE----CCSSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTB
T ss_pred ccCCCeEEEEECCCccccceeeecc----CCCcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccc
Confidence 8999999988543 33343 444689999999 777 55544 34999999875432211111000000
Q ss_pred -----------CCCCceeeec---------------------------------eEEeecCCCceeecce---ecceEEE
Q 022590 148 -----------KFPTKYVQFP---------------------------------VFIASVHSNYVDCNRW---LGDFILS 180 (294)
Q Consensus 148 -----------~~~~~~~~~~---------------------------------~~~~~~~~~~i~~~~~---~~~~l~~ 180 (294)
.........+ ......+...+..+.+ +++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 0000000000 0001112223344444 3567777
Q ss_pred eeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCce
Q 022590 181 KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV 251 (294)
Q Consensus 181 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 251 (294)
+ ++.|.+||+.+++ .+..+.. ...+..++|+|+++ +|++++.++.|++||+.+.+..
T Consensus 273 ~--~~~v~~~d~~~~~---------~~~~~~~-~~~~~~~~~s~dg~--~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRK---------LIKAANL-DHTYYCVAFDKKGD--KLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp E--ESEEEEEETTTTE---------EEEEEEC-SSCCCEEEECSSSS--CEEEESBSSEEEEEETTTTEEE
T ss_pred E--cCeEEEEECccCe---------EEEEEcC-CCCccceEECCCCC--EEEEecCCCeEEEEecccccee
Confidence 6 8899999998754 3444443 34467899999984 6667788899999999887643
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=2e-17 Score=130.39 Aligned_cols=240 Identities=12% Similarity=0.081 Sum_probs=151.0
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEE--eCCCCCceEEEe------------
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR--TQPLKPSLVVSA------------ 72 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s~------------ 72 (294)
+...+...+|+ |+|+ .|+.++.++.|++||+.+++....+..+...+.... ++| ++.+++..
T Consensus 79 ~~~~~~~~~~s--pdg~-~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 79 RGDNTFGGFLS--PDDD-ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp SCBCSSSCEEC--TTSS-EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCS
T ss_pred CCCCccceEEc--CCCC-EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccc
Confidence 33444456776 9999 899999999999999999887766666666554444 478 77777632
Q ss_pred ----------eCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC------CcEEEEecccccccc
Q 022590 73 ----------SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYV 136 (294)
Q Consensus 73 ----------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~ 136 (294)
..+..|.+||+.+++...... +...+..+.|+|.++..|+.+..+ ..|.++|+....
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--- 227 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTGESTVILQ----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--- 227 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---
T ss_pred cchhhhhhccCCcceEEEEECCCCceEEeec----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---
Confidence 345789999999887655544 666789999999445556555543 367777766421
Q ss_pred ccceeecCCCCCCCCceeeeceEEeecCC--Cceeeccee--cceEEEeeC-CC----eEEEecCCCCCCCCCCCCceee
Q 022590 137 EKSFTWTDLPSKFPTKYVQFPVFIASVHS--NYVDCNRWL--GDFILSKSV-DN----EIVLWEPKMKEQSPGEGTADIL 207 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~--~~~l~~~~~-d~----~i~iwd~~~~~~~~~~~~~~~~ 207 (294)
...+..+. ..+....|+ |+.|+..+. ++ .|.+||+.+++. ..+
T Consensus 228 ---------------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l 279 (388)
T 3pe7_A 228 ---------------------MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------RQL 279 (388)
T ss_dssp ---------------------CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------EEE
T ss_pred ---------------------eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------EEE
Confidence 11112222 245566675 666654333 22 499999987752 122
Q ss_pred eeeecCC---CCeeEEEEcccCCcceEEEE---------cCCCeEEEEeccCCCceeeeeccccccCC-----------C
Q 022590 208 QKYPVPE---CDIWFIKFSCDFHYNAAAIG---------NREGKIFVWELQSSPPVLIARLSHAQSKS-----------P 264 (294)
Q Consensus 208 ~~~~~~~---~~i~~~~~~~~~~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-----------~ 264 (294)
...+... .......|+|+++ .|+.. ..+..|++||+.+++... +. .+.. .
T Consensus 280 ~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~---l~--~~~~~~~~~~~~~~~~ 352 (388)
T 3pe7_A 280 TSMPACSHLMSNYDGSLMVGDGS--DAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR---VA--RHDTSWKVFEGDRQVT 352 (388)
T ss_dssp EEECCEEEEEECTTSSEEEEEEC--CC------------CCCCEEEEEETTTTEEEE---EE--ECCCCCCCBTTBSSTT
T ss_pred EcCCCceeeeecCCCCeEccCCC--cceeEeeeccccccCCCCEEEEEeccCCceEE---ec--cccCcccccccccccC
Confidence 2222100 0011236999996 34432 556789999998875322 22 1222 4
Q ss_pred eEEEEEccCCCEEEEec-cCCcEEEEecC
Q 022590 265 IRQTAMSYDGSTILSCC-EDGAIWRWDAI 292 (294)
Q Consensus 265 v~~~~~s~~~~~l~s~~-~dg~i~vw~~~ 292 (294)
+..++|+|||+.|+..+ .+|...+|.+.
T Consensus 353 ~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 353 HPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp CCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 77889999999887655 57777777553
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1.9e-17 Score=139.48 Aligned_cols=253 Identities=13% Similarity=0.012 Sum_probs=161.9
Q ss_pred cccCceeEEEEEeecCCCceEEEEe--ecCCeEEEEEcCCccccceecccCcceE---------EEEeC--CCCCce-EE
Q 022590 5 DQKEESFYTVSWACNVDGIPFLVAG--GINGIIRVIDVSNEKLHKSFVGHGDSIN---------EIRTQ--PLKPSL-VV 70 (294)
Q Consensus 5 ~~h~~~v~~~~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~~-l~ 70 (294)
..|...+..++|+ +++. +++.. +.++...||....+.....+..|...+. ...|+ | +++. |+
T Consensus 20 ~~~~~~~~~~~~s--~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la 95 (662)
T 3azo_A 20 ASRSGRPACVGAV--GDEV-WWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLV 95 (662)
T ss_dssp HHTCSCCEEEEEE--TTEE-EEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEE
T ss_pred hhcCCccceeEEc--CCeE-EEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEE
Confidence 3578889999998 7665 56666 5588999999655555666766766666 56565 8 6666 55
Q ss_pred EeeC-CCcEEEEEcC--C-CceEEEeeccC--CCCCceeEEEEecCCCceEEeeecC----------CcEEEEecccccc
Q 022590 71 SASK-DESVRLWNVQ--T-GICILIFAGAG--GHRNEVLSVDFHPSDIYRIASCGMD----------NTVKIWSMKEFWT 134 (294)
Q Consensus 71 s~~~-dg~i~vwd~~--~-~~~~~~~~~~~--~~~~~v~~l~~~~~~~~~l~~~~~d----------g~i~~wd~~~~~~ 134 (294)
.++. +..|.++++. . ++ ...+.... .|...+..++|+| +++.|++++.+ ..|++||+.....
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 5443 5566666664 2 33 34444100 0566789999999 88888888876 5899999876100
Q ss_pred ccccceeecCCCCCCCCceeeeceEEee-cCCCceeeccee--cceEEEeeCC--------CeEEEecCC-CCCCCCCCC
Q 022590 135 YVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL--GDFILSKSVD--------NEIVLWEPK-MKEQSPGEG 202 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--~~~l~~~~~d--------~~i~iwd~~-~~~~~~~~~ 202 (294)
.. ......+. .+...+..+.|+ |++|+.++.+ ..|.+||+. ++.
T Consensus 174 ~~------------------~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------ 229 (662)
T 3azo_A 174 AD------------------RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------ 229 (662)
T ss_dssp TC------------------GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------
T ss_pred cc------------------CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------
Confidence 00 00112222 344567777776 7888877754 379999998 341
Q ss_pred CceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC--eEEEEeccCCCceeeeeccccccC-----CCeEEEEEccCCC
Q 022590 203 TADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLIARLSHAQSK-----SPIRQTAMSYDGS 275 (294)
Q Consensus 203 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~ 275 (294)
..........+...+..+.|+|+++ +++++..++ .|.+||+.+++........ .... ..+..++|+|+++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~spdg~--l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 230 FADTRTLLGGPEEAIAQAEWAPDGS--LIVATDRTGWWNLHRVDPATGAATQLCRRE-EEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEEEEEEEETTBCEEEEEECTTSC--EEEEECTTSSCEEEEECTTTCCEEESSCCS-SBSSCCCCSTTCCSEEECTTSC
T ss_pred ccccEEeCCCCCceEcceEECCCCe--EEEEECCCCCeEEEEEECCCCceeeccccc-ccccCccccccCceEeEeCCCE
Confidence 0012222233456788999999994 777788888 5666666555432221111 0000 0156789999999
Q ss_pred EEEEeccCCcEEEEec
Q 022590 276 TILSCCEDGAIWRWDA 291 (294)
Q Consensus 276 ~l~s~~~dg~i~vw~~ 291 (294)
++++++. +.++||.+
T Consensus 307 ~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 307 IAVVHGK-GAAVLGIL 321 (662)
T ss_dssp EEEEEBS-SSCEEEEE
T ss_pred EEEEEEc-CccEEEEE
Confidence 9999998 99999944
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=1.3e-16 Score=121.07 Aligned_cols=239 Identities=10% Similarity=-0.025 Sum_probs=158.1
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
.+.....+++|+ |+|+.+++++..++.|..|+..++ ...+..+...+.+++++| +++++++...++.|.+||..+
T Consensus 25 ~~~~~~eg~~~d--~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 25 DGFTWTEGPVYV--PARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCCSSEEEEEEE--GGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTT
T ss_pred cCCccccCCeEe--CCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCC
Confidence 344566788887 888657888888999999999877 566666778899999999 888887777778999999988
Q ss_pred CceEEEeeccCC-CCCceeEEEEecCCCceEEe----eec-------------CCcEEEEeccccccccccceeecCCCC
Q 022590 86 GICILIFAGAGG-HRNEVLSVDFHPSDIYRIAS----CGM-------------DNTVKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 86 ~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~----~~~-------------dg~i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
++.........+ ....+..++++| ++.++++ |.. .+.|..++...
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g---------------- 162 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG---------------- 162 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS----------------
T ss_pred CcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCC----------------
Confidence 876544321111 123567899999 8887776 331 23444444331
Q ss_pred CCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCc-eeeeeeecCCCCeeEEEEcc
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTA-DILQKYPVPECDIWFIKFSC 224 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 224 (294)
.......+......++|+ ++.+++.+.++.|.+||+.... .. .....+......+..+++.+
T Consensus 163 ---------~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g------~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 163 ---------TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG------ETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp ---------CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS------CEEEEEEEECCSSSCCCSEEEBT
T ss_pred ---------CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC------cCcCCCeEeeCCCCCCCeEEECC
Confidence 011223344555677776 6777777778999999987211 11 01112222344566799999
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEE-ccCCCEEEEeccCCcEEEEecC
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAM-SYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
++ .+.++. ++.|.+||.. ++ ....+. .+.. +.+++| +|+++.|++++.++ +.-++.+
T Consensus 228 ~G--~l~v~~--~~~v~~~~~~-g~--~~~~~~--~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 228 GG--LIWASA--GDGVHVLTPD-GD--ELGRVL--TPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp TS--CEEEEE--TTEEEEECTT-SC--EEEEEE--CSSC-CCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred CC--CEEEEc--CCeEEEECCC-CC--EEEEEE--CCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 98 344444 7889999986 43 233333 2334 889999 58999898887764 4444443
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.79 E-value=6.3e-16 Score=115.59 Aligned_cols=220 Identities=12% Similarity=0.054 Sum_probs=155.5
Q ss_pred CceEEEEeecCCeEEEEEcCCccccceecccC-cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCC
Q 022590 22 GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHG-DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRN 100 (294)
Q Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 100 (294)
++ +|++++.++.|.+||.++++.+.++..+. ..+.++.++| ++++|+ +.++.|..||. +++.+..+.. +...
T Consensus 5 ~~-~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~--~~~~ 77 (276)
T 3no2_A 5 QH-LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAA--PAGC 77 (276)
T ss_dssp CE-EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEEC--CTTC
T ss_pred Cc-EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcC--CCCc
Confidence 44 89999999999999999999999998776 5789999999 888888 34678999999 8999988874 2235
Q ss_pred ceeEEEEecCCCceEEeeec-CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecce--ecce
Q 022590 101 EVLSVDFHPSDIYRIASCGM-DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW--LGDF 177 (294)
Q Consensus 101 ~v~~l~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~ 177 (294)
.+.++.+.| +++++++.+. ++.+..+|... +....... .. ....+......+.+ ++++
T Consensus 78 ~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~G-k~l~~~~~--~~---------------~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 78 EMQTARILP-DGNALVAWCGHPSTILEVNMKG-EVLSKTEF--ET---------------GIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp EEEEEEECT-TSCEEEEEESTTEEEEEECTTS-CEEEEEEE--CC---------------SCSSGGGSCSCCEECTTSCE
T ss_pred cccccEECC-CCCEEEEecCCCCEEEEEeCCC-CEEEEEec--cC---------------CCCcccccccCceECCCCCE
Confidence 788999999 8888888776 67777777532 11111000 00 00011112222333 3889
Q ss_pred EEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc
Q 022590 178 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 257 (294)
Q Consensus 178 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 257 (294)
+++...++.|..||.. ++ .+..+... ..+..+...+++ ++++++..++.|..+|..+++.+......
T Consensus 139 lv~~~~~~~v~~~d~~-G~---------~~w~~~~~-~~~~~~~~~~~g--~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 139 LVPLFATSEVREIAPN-GQ---------LLNSVKLS-GTPFSSAFLDNG--DCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp EEEETTTTEEEEECTT-SC---------EEEEEECS-SCCCEEEECTTS--CEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred EEEecCCCEEEEECCC-CC---------EEEEEECC-CCccceeEcCCC--CEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 9999999999999987 65 44555443 345567777877 58888888889999999988755444322
Q ss_pred c-c-ccCCCeEEEEEccCCCEEEEe
Q 022590 258 H-A-QSKSPIRQTAMSYDGSTILSC 280 (294)
Q Consensus 258 ~-~-~~~~~v~~~~~s~~~~~l~s~ 280 (294)
. . .....+..++..++|.++++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCccccccccceEcCCCCEEEEe
Confidence 1 1 112347888899999988887
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=5.5e-17 Score=137.17 Aligned_cols=243 Identities=10% Similarity=-0.019 Sum_probs=152.7
Q ss_pred ccCceeEEEEEeecCCCceEEE-----EeecCCeEEEEEcCCccccceecccCcce--EEEEeCCCCCceEEEeeCCCc-
Q 022590 6 QKEESFYTVSWACNVDGIPFLV-----AGGINGIIRVIDVSNEKLHKSFVGHGDSI--NEIRTQPLKPSLVVSASKDES- 77 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~-----~~~~dg~i~iw~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~s~~~dg~- 77 (294)
+|...+..++|+ |||+ +|| .|+.+..|++||+.+++.+.. .+...+ ..++|+| +++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~S--PDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVS--WDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTP-DSKGFYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEEC--TTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECT-TSSEEEEEECCCCT
T ss_pred CCCEEEEEEEEC--CCCC-EEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEec-CCCEEEEEEecCCC
Confidence 344567788887 9999 777 344456899999999886511 121222 6899999 8888988888776
Q ss_pred ------------EEEEEcCCCce--EEEeeccCCCCCceeEEEEecCCCceEEeeecCC----cEEEEeccccccccccc
Q 022590 78 ------------VRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN----TVKIWSMKEFWTYVEKS 139 (294)
Q Consensus 78 ------------i~vwd~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg----~i~~wd~~~~~~~~~~~ 139 (294)
|++|++.+++. ...+. ...+...+..+.|+| ++.+|+.++.++ .|.+|+....
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~-~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~------- 262 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHE-RTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEK------- 262 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEEC-CCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCS-------
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEe-cCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCC-------
Confidence 99999988763 22222 113556789999999 777777776655 5666654331
Q ss_pred eeecCCCCCCCCceeeeceEEeecCCCceeeccee-cceEEEeeC----CCeEEEecCCCCCCCCCCCCceeeeeeecC-
Q 022590 140 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSV----DNEIVLWEPKMKEQSPGEGTADILQKYPVP- 213 (294)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 213 (294)
....+..+...+....+. ++ ++..+. ++.|.+||+.++... .........
T Consensus 263 -----------------~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~------~~~~l~~~~~ 318 (695)
T 2bkl_A 263 -----------------DFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARA------SWKEIVPEDS 318 (695)
T ss_dssp -----------------SCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGG------GCEEEECCCS
T ss_pred -----------------ceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCcc------CCeEEecCCC
Confidence 111222233333333333 55 444343 578999999765310 011112222
Q ss_pred CCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC-CCceeeeeccccccCCCeEEEEEccCCCEEE----EeccCCcEEE
Q 022590 214 ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS-SPPVLIARLSHAQSKSPIRQTAMSYDGSTIL----SCCEDGAIWR 288 (294)
Q Consensus 214 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~----s~~~dg~i~v 288 (294)
...+..++++ ++ .++++...++..++|.+.. ++ ....+.. .....+..++++|+++.|+ +....+.|++
T Consensus 319 ~~~l~~~~~~-~~--~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 319 SASLLSVSIV-GG--HLSLEYLKDATSEVRVATLKGK--PVRTVQL-PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp SCEEEEEEEE-TT--EEEEEEEETTEEEEEEEETTCC--EEEECCC-SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEEE-CC--EEEEEEEECCEEEEEEEeCCCC--eeEEecC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 3456777777 33 5788888999988887762 32 2222321 1245677889999998777 3345578999
Q ss_pred EecCC
Q 022590 289 WDAIP 293 (294)
Q Consensus 289 w~~~~ 293 (294)
||+.+
T Consensus 393 ~d~~~ 397 (695)
T 2bkl_A 393 TSVST 397 (695)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99864
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=3.9e-17 Score=137.54 Aligned_cols=244 Identities=10% Similarity=0.021 Sum_probs=148.3
Q ss_pred EEEEeecCCCceE-EEEee-cCCeEEEEEcC--Cccccceecc-----cCcceEEEEeCCCCCceEEEeeCC--------
Q 022590 13 TVSWACNVDGIPF-LVAGG-INGIIRVIDVS--NEKLHKSFVG-----HGDSINEIRTQPLKPSLVVSASKD-------- 75 (294)
Q Consensus 13 ~~~~~~~~~~~~~-l~~~~-~dg~i~iw~~~--~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~d-------- 75 (294)
...|+.+|||+ . |+.++ .+..|.++++. .......+.. |...+..++|+| +++.|++++.+
T Consensus 81 ~~~~~~SPDg~-~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 81 PWAGVPRPAGG-PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEECCSSSS-CEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTC
T ss_pred cceeeeecCCC-eEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCC
Confidence 55566569999 5 55444 35677777765 2033445554 677899999999 88889888876
Q ss_pred --CcEEEEEcCC------CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC--------cEEEEecc-cccccccc
Q 022590 76 --ESVRLWNVQT------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--------TVKIWSMK-EFWTYVEK 138 (294)
Q Consensus 76 --g~i~vwd~~~------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg--------~i~~wd~~-~~~~~~~~ 138 (294)
..|.+||+.+ ++...... .+...+..++|+| +++.|+.++.++ .|++||+. ++..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~---- 230 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSD---DAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF---- 230 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSC---SCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE----
T ss_pred ceeEEEEEECCCCccccCCceeEEEe---cCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc----
Confidence 5899999987 55433320 2456788899999 888888777553 79999988 3200
Q ss_pred ceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCC--eEEEecCCCCCCCCCCCCceeeeeeecCC
Q 022590 139 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN--EIVLWEPKMKEQSPGEGTADILQKYPVPE 214 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
.........+...+..+.|+ |++++++..++ .|.+||+.+++............ .+.-.
T Consensus 231 ----------------~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~p~w~ 293 (662)
T 3azo_A 231 ----------------ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFA-GPLWT 293 (662)
T ss_dssp ----------------EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS-CCCCS
T ss_pred ----------------cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccccc-Ccccc
Confidence 01222334456778888886 67777777788 67777765543110000000000 00000
Q ss_pred CCeeEEEEcccCCcceEEEEcCCCeEEEEecc--CCCceeeeeccccccCCCeEEE-EEccCCCEEEEeccCCc--EEEE
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ--SSPPVLIARLSHAQSKSPIRQT-AMSYDGSTILSCCEDGA--IWRW 289 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~--i~vw 289 (294)
..+..++|+|++ .+++++.. +.+++|.+. +++ ...+. .+...+..+ +++++.-++++++.+.. |++|
T Consensus 294 ~~~~~~~~~~~~--~~~~~~~~-~~~~l~~~d~~~~~---~~~l~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 294 PGMRWFAPLANG--LIAVVHGK-GAAVLGILDPESGE---LVDAA--GPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp TTCCSEEECTTS--CEEEEEBS-SSCEEEEEETTTTE---EEECC--SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred ccCceEeEeCCC--EEEEEEEc-CccEEEEEECCCCc---EEEec--CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 114568888887 58888888 999999554 442 23333 444567666 44433334444555544 4444
Q ss_pred ec
Q 022590 290 DA 291 (294)
Q Consensus 290 ~~ 291 (294)
|+
T Consensus 366 d~ 367 (662)
T 3azo_A 366 DT 367 (662)
T ss_dssp ET
T ss_pred EC
Confidence 54
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.79 E-value=3.5e-16 Score=132.63 Aligned_cols=251 Identities=8% Similarity=-0.052 Sum_probs=156.6
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCC-----eEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCc----
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGING-----IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDES---- 77 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~---- 77 (294)
|...+..++|+ |||+ +||.+..++ .|++||+.+++.......+ ..+..++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~S--PDg~-~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFS--EDGE-YFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEEC--TTSS-EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCC
T ss_pred CCEEEEEEEEC--CCCC-EEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccc
Confidence 33457777777 9999 777665543 8999999998876533322 2377899999 8888888887766
Q ss_pred ------------EEEEEcCCCceE--EEeeccCCCCCceeEEEEecCCCceEEeeec-----CCcEEEEecccccccccc
Q 022590 78 ------------VRLWNVQTGICI--LIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-----DNTVKIWSMKEFWTYVEK 138 (294)
Q Consensus 78 ------------i~vwd~~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~~~~~~ 138 (294)
|.+|++.+++.. ..+.. ..|...+..+.|+| ++.+|+.++. +..|++||+.+.......
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccCCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999887632 22221 13556688999999 7777776654 568999998751000000
Q ss_pred ceeecCCCCCCCCceeeeceEEeecCCCceee-cceecceEEEeeCC----CeEEEecCCCCCCCCCCCCceeeeeeecC
Q 022590 139 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKSVD----NEIVLWEPKMKEQSPGEGTADILQKYPVP 213 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 213 (294)
......+..+...+.. +..+++.|+..+.. +.|.+||+.++... ....+..+
T Consensus 276 ----------------~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-------~~~~l~~~ 332 (710)
T 2xdw_A 276 ----------------ILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-------KWKVLVPE 332 (710)
T ss_dssp ----------------SCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-------GCEEEECC
T ss_pred ----------------ccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-------cceeccCC
Confidence 0012222333333333 22236666655543 36999998765310 11222223
Q ss_pred C--CCeeEEEEcccCCcceEEEEcCCCe--EEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEe----ccCCc
Q 022590 214 E--CDIWFIKFSCDFHYNAAAIGNREGK--IFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC----CEDGA 285 (294)
Q Consensus 214 ~--~~i~~~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~----~~dg~ 285 (294)
. ..+..+.|++++ .++++...++. |++|++.+++. ...+. .+...+..++++|+++.++.. ...+.
T Consensus 333 ~~~~~~~~~~~~~~~--~lv~~~~~~g~~~l~~~~~~~g~~--~~~l~--~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 406 (710)
T 2xdw_A 333 HEKDVLEWVACVRSN--FLVLCYLHDVKNTLQLHDLATGAL--LKIFP--LEVGSVVGYSGQKKDTEIFYQFTSFLSPGI 406 (710)
T ss_dssp CSSCEEEEEEEETTT--EEEEEEEETTEEEEEEEETTTCCE--EEEEC--CCSSEEEEEECCTTCSEEEEEEECSSCCCE
T ss_pred CCCCeEEEEEEEcCC--EEEEEEEECCEEEEEEEECCCCCE--EEecC--CCCceEEEEecCCCCCEEEEEEeCCCCCCE
Confidence 2 257778888655 57788888885 55566655542 23333 335678899999998766633 24578
Q ss_pred EEEEecCC
Q 022590 286 IWRWDAIP 293 (294)
Q Consensus 286 i~vw~~~~ 293 (294)
|+.||+.+
T Consensus 407 i~~~d~~t 414 (710)
T 2xdw_A 407 IYHCDLTK 414 (710)
T ss_dssp EEEEETTS
T ss_pred EEEEECCC
Confidence 99999864
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.5e-15 Score=117.13 Aligned_cols=243 Identities=11% Similarity=0.005 Sum_probs=152.7
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCC----CcEEEE
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD----ESVRLW 81 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~i~vw 81 (294)
.+...+.+++|+ |+|+ +++++..++.|.+||.++++.......+...+.+++++| +++++++...+ +.|.+|
T Consensus 42 ~~~~~~~~~~~~--~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFD--RQGQ-LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEEC--TTSC-EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEE
T ss_pred ccCccccCcEEC--CCCC-EEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEE
Confidence 344556788887 8998 788888899999999988776554445667899999999 77877777666 689999
Q ss_pred EcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeec------CCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 82 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM------DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
|..++.....+... .+...+.+++++| ++.++++... .+.|..+|.....
T Consensus 118 d~~~~~~~~~~~~~-~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~---------------------- 173 (333)
T 2dg1_A 118 TENGDNLQDIIEDL-STAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRT---------------------- 173 (333)
T ss_dssp CTTSCSCEEEECSS-SSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCC----------------------
T ss_pred eCCCCEEEEEEccC-ccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCE----------------------
Confidence 99877655333311 2456799999999 7776666543 2445555544311
Q ss_pred eceEEeecCCCceeeccee--cceE-EEeeCCCeEEEecCCCC-CCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceE
Q 022590 156 FPVFIASVHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMK-EQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 231 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 231 (294)
...+......+..+.|+ ++.+ ++...++.|.+||+... ...... .......... ...+..+++++++ .++
T Consensus 174 --~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~-~~~~~~~~~~-~~~~~~i~~d~~G--~l~ 247 (333)
T 2dg1_A 174 --VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF-GATIPYYFTG-HEGPDSCCIDSDD--NLY 247 (333)
T ss_dssp --EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE-EEEEEEECCS-SSEEEEEEEBTTC--CEE
T ss_pred --EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc-cceEEEecCC-CCCCCceEECCCC--CEE
Confidence 01111122345667775 5545 44456789999998642 210000 0000111111 1356789999988 466
Q ss_pred EEEcCCCeEEEEeccCCCceeeeeccc--cccCCCeEEEEEccCCCEEEEeccC
Q 022590 232 AIGNREGKIFVWELQSSPPVLIARLSH--AQSKSPIRQTAMSYDGSTILSCCED 283 (294)
Q Consensus 232 ~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d 283 (294)
++...++.|.+||.+ ++......... .++...+.+++|+|+++.|+.++.+
T Consensus 248 v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 248 VAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666677899999984 43222222211 1122268899999998777665554
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=1.3e-15 Score=117.04 Aligned_cols=235 Identities=10% Similarity=-0.024 Sum_probs=157.4
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEE
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICIL 90 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 90 (294)
...+++. +++ +.++...++.|.+||..+++.+.++. .......+++++ ++.++++...++.|.+||..+++...
T Consensus 46 ~~~i~~~---~~~-lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 46 AQSMVIR---DGI-GWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp EEEEEEE---TTE-EEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ceEEEEE---CCE-EEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEE
Confidence 4556653 344 66667778999999999999988885 346789999988 66655555488999999999998877
Q ss_pred EeeccC--CCCCceeEEEEecCCCceEEeee-cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 91 IFAGAG--GHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 91 ~~~~~~--~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
.+.... +.......+++ . ++.++++.. .++.|.++|+.+... ...+.. ...
T Consensus 120 ~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~-----------------------~~~i~~-g~~ 173 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKV-----------------------VDELTI-GIQ 173 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEE-----------------------EEEEEC-SSC
T ss_pred EEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeE-----------------------EEEEEc-CCC
Confidence 776311 11125667777 3 666666554 488999999987421 111111 122
Q ss_pred eeeccee--cceEEEeeCC----------CeEEEecCCCCCCCCCCCCceeeeeeecC-CCCeeEEEEcccCCcceEEEE
Q 022590 168 VDCNRWL--GDFILSKSVD----------NEIVLWEPKMKEQSPGEGTADILQKYPVP-ECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~l~~~ 234 (294)
...+.++ +++++++..+ +.|.++|..+++ ....+..+ ......++++|+++ .+++.
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---------v~~~~~~~~g~~p~~la~~~d~~--~lyv~ 242 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT---------VEKQFKFKLGDWPSEVQLNGTRD--TLYWI 242 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE---------EEEEEECCTTCCCEEEEECTTSC--EEEEE
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe---------EEEEEecCCCCCceeEEEecCCC--EEEEE
Confidence 3455554 6666665544 789999998654 34444432 23678999999884 56655
Q ss_pred cCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEcc-CCCEEEEe----ccCCcEEEEecC
Q 022590 235 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSC----CEDGAIWRWDAI 292 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~----~~dg~i~vw~~~ 292 (294)
.. .|.+||..+++........ ........++++| ++.+.++. ..++.|.+||.+
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~--~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLE--FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBC--CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred cc--EEEEEECCCCceeeeeeec--CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 44 8999999887632111111 1135688999999 55666665 678899999875
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.3e-17 Score=131.71 Aligned_cols=232 Identities=11% Similarity=0.008 Sum_probs=145.9
Q ss_pred eEEEEEeecCCCceEEEEeecC---CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 11 FYTVSWACNVDGIPFLVAGGIN---GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
+..++|+ |+|+ +|+..... ..|.+||+.+++......++......+.|+| +++.|+.++.++.|.+||+.+++
T Consensus 38 ~~~~~~S--pdG~-~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFT--QDGK-KLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBC--TTSC-EEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCC--CCCC-EEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCC
Confidence 5666776 9999 66655432 4788899988776544443333334488999 88999999999999999998887
Q ss_pred eEEEeeccCCCCCceeE-------------------EEEecCCCceEEee-----ecCCcEEEEeccccccccccceeec
Q 022590 88 CILIFAGAGGHRNEVLS-------------------VDFHPSDIYRIASC-----GMDNTVKIWSMKEFWTYVEKSFTWT 143 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~~l~~~-----~~dg~i~~wd~~~~~~~~~~~~~~~ 143 (294)
...... .+...... ..|+| ++..++.+ ..+..|.+||+.++.
T Consensus 114 ~~~~~~---~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~---------- 179 (396)
T 3c5m_A 114 EQVIYT---VDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGE---------- 179 (396)
T ss_dssp EEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCC----------
T ss_pred cEEEEe---cccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCc----------
Confidence 665554 23332222 34566 55545443 355678888887632
Q ss_pred CCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCC------CeEEEecCCCCCCCCCCCCceeeeeeecC-
Q 022590 144 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVD------NEIVLWEPKMKEQSPGEGTADILQKYPVP- 213 (294)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~- 213 (294)
...+..+...+..+.|+ +..|+..+.+ ..|.+||+..++. ..+..+
T Consensus 180 --------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----------~~l~~~~ 235 (396)
T 3c5m_A 180 --------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV----------RKIKEHA 235 (396)
T ss_dssp --------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC----------EESSCCC
T ss_pred --------------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce----------eEeeccC
Confidence 11122345566677775 4455554433 4688888865431 111111
Q ss_pred -CCCeeEEEEcccCCcceEEEEcCC-----CeEEEEeccCCCceeeeeccccccCCCeEEEEEcc-CCCEEEEec-----
Q 022590 214 -ECDIWFIKFSCDFHYNAAAIGNRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSCC----- 281 (294)
Q Consensus 214 -~~~i~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~----- 281 (294)
...+..+.|+|+++ .|+..+.+ +.|++||+.+++........ ... +.|+| +|+++++++
T Consensus 236 ~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------~~~-~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 236 EGESCTHEFWIPDGS--AMAYVSYFKGQTDRVIYKANPETLENEEVMVMP------PCS-HLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp TTEEEEEEEECTTSS--CEEEEEEETTTCCEEEEEECTTTCCEEEEEECC------SEE-EEEECSSSSEEEEEECCC--
T ss_pred CCccccceEECCCCC--EEEEEecCCCCccceEEEEECCCCCeEEeeeCC------CCC-CCccCCCCceEEEecCCcce
Confidence 22467789999995 45444332 44999999887643333222 123 89999 999888754
Q ss_pred -----------cCCcEEEEecCC
Q 022590 282 -----------EDGAIWRWDAIP 293 (294)
Q Consensus 282 -----------~dg~i~vw~~~~ 293 (294)
.++.|++||+.+
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp --------CCCCCCEEEEEETTT
T ss_pred eeccccccccCCCCcEEEEeccc
Confidence 346899999754
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=1.4e-16 Score=123.00 Aligned_cols=240 Identities=9% Similarity=0.006 Sum_probs=159.9
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
..|.+++|+ +++. .++..+.++.++.| .++....+..+...+.+++|+| ++++++++..++.|.+||..+++.
T Consensus 6 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 6 QDLPTLFYS--GKSN-SAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCCCBCCSC--GGGG-CSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE
T ss_pred cccceeeec--CCcc-ceeEEeecccCccc---ccceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcE
Confidence 457777776 7666 66666778899999 3445566666777789999999 788888888899999999988876
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecC----CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
..... .+...+.+++++| ++.++++...+ +.|.+||....... .......+
T Consensus 79 ~~~~~---~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~---------------------~~~~~~~~ 133 (333)
T 2dg1_A 79 KRPFV---SHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQ---------------------DIIEDLST 133 (333)
T ss_dssp EEEEE---CSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCE---------------------EEECSSSS
T ss_pred EEEee---CCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEE---------------------EEEccCcc
Confidence 65443 3567899999999 77777776665 68999998763210 00000112
Q ss_pred CCceeeccee--cceEEEeeC------CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 165 SNYVDCNRWL--GDFILSKSV------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 165 ~~~i~~~~~~--~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
...+..+.++ ++++++... .+.|..+|...++ +..+......+..++|+|+++ .++++...
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~i~~~~dg~-~l~v~~~~ 202 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT----------VTPIIQNISVANGIALSTDEK-VLWVTETT 202 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC----------EEEEEEEESSEEEEEECTTSS-EEEEEEGG
T ss_pred CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE----------EEEeecCCCcccceEECCCCC-EEEEEeCC
Confidence 3456677776 555555443 3567777765432 111111223477899999984 24455566
Q ss_pred CCeEEEEeccC-CCceeee--e-c-cccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 237 EGKIFVWELQS-SPPVLIA--R-L-SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 237 dg~i~i~d~~~-~~~~~~~--~-~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
++.|.+||+.. ++..... . . ....+ ..+..++++++|+++++...++.|.+||.+
T Consensus 203 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 203 ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 88999999964 2211110 0 1 11111 357889999999988888788899999874
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=9e-16 Score=119.07 Aligned_cols=221 Identities=10% Similarity=-0.023 Sum_probs=141.2
Q ss_pred eeEEEEEeecCCCceEEEEeecC---C--eEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCC---------
Q 022590 10 SFYTVSWACNVDGIPFLVAGGIN---G--IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD--------- 75 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~d---g--~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------- 75 (294)
.+..++|+ |||+ +|+..+.+ + .|.+|++.+++...... +.. +..++|+| +++.|+.++.+
T Consensus 60 ~~~~~~~S--pDg~-~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRIS--PDGK-KIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEEC--TTSS-EEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECT-TSSEEEEEEECCCC------
T ss_pred cCCCeEEC--CCCC-EEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECC-CCCEEEEEEccCCCcCCcEE
Confidence 35667776 9999 77776653 3 47888888777655444 334 99999999 77877776632
Q ss_pred ------------------CcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC-------cEEEEecc
Q 022590 76 ------------------ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-------TVKIWSMK 130 (294)
Q Consensus 76 ------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg-------~i~~wd~~ 130 (294)
..|.+||+.+++.+..+. . . .+..+.|+| ++ +++++..++ ...+|.+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE---K-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEE---E-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeec---C-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC
Confidence 578999998887645555 2 2 788999999 77 777775542 34555443
Q ss_pred ccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCC--------CeEEEecCCCCCCCCCCC
Q 022590 131 EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD--------NEIVLWEPKMKEQSPGEG 202 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~ 202 (294)
... ...+..+ ..+..+..+|+.|+.++.+ ..|.+|| +++
T Consensus 207 ~~~------------------------~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~------ 253 (347)
T 2gop_A 207 DGK------------------------EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE------ 253 (347)
T ss_dssp TTE------------------------EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC------
T ss_pred CCc------------------------eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc------
Confidence 211 0011111 2333334457777776643 4688888 332
Q ss_pred CceeeeeeecCCCCeeE-EEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec
Q 022590 203 TADILQKYPVPECDIWF-IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC 281 (294)
Q Consensus 203 ~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 281 (294)
.......+...+.. +.|+ ++ ++++++.++.+++| +.+++. .... .+...|.+++|+| .++++++
T Consensus 254 ---~~~l~~~~~~~~~~~~~~s-dg---~~~~~~~~~~~~l~-~~~g~~--~~~~---~~~~~v~~~~~s~--~~~~~~~ 318 (347)
T 2gop_A 254 ---VMGILDEVDRGVGQAKIKD-GK---VYFTLFEEGSVNLY-IWDGEI--KPIA---KGRHWIMGFDVDE--IVVYLKE 318 (347)
T ss_dssp ---EEESSTTCCSEEEEEEEET-TE---EEEEEEETTEEEEE-EESSSE--EEEE---CSSSEEEEEEESS--SEEEEEE
T ss_pred ---eEeccccCCcccCCccEEc-Cc---EEEEEecCCcEEEE-EcCCce--EEEe---cCCCeEEeeeeeC--cEEEEEc
Confidence 11112233445665 8888 64 78888899999999 885432 2222 2356799999999 6777777
Q ss_pred cCCcE-EEEec
Q 022590 282 EDGAI-WRWDA 291 (294)
Q Consensus 282 ~dg~i-~vw~~ 291 (294)
.++.. .+|.+
T Consensus 319 ~~~~~~~l~~~ 329 (347)
T 2gop_A 319 TATRLRELFTW 329 (347)
T ss_dssp CSSSCCEEEEE
T ss_pred CCCChHHheEe
Confidence 77654 67754
No 181
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=5.6e-14 Score=106.53 Aligned_cols=239 Identities=9% Similarity=0.005 Sum_probs=160.7
Q ss_pred ccCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc-eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 6 QKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 6 ~h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
.+...+.++++. ++|+ +.++...++.|.+||.. ++... .+..+...+.++++.+ ++.++++...++.|..||..
T Consensus 12 ~~~~~~~~i~~d--~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVS--DKGK-VWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEEC--CCCC-EEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC
Confidence 345678888887 8898 66666667899999987 54322 1223456789999999 77887777778889999986
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
++. ..+... .....+.++++.| ++.++++...++.|..||... . .........
T Consensus 87 -g~~-~~~~~~-~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g-~----------------------~~~~~~~~~ 139 (299)
T 2z2n_A 87 -GII-KEYTLP-NPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDG-K----------------------IREYELPNK 139 (299)
T ss_dssp -SCE-EEEECS-STTCCEEEEEECT-TSCEEEEETTTTEEEEECTTC-C----------------------EEEEECSST
T ss_pred -CcE-EEEeCC-CcCCCceeeEECC-CCCEEEEecCCceEEEECCCC-C----------------------EEEecCCCC
Confidence 433 333311 2445789999998 778777777788999999832 1 001111122
Q ss_pred CCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEE
Q 022590 165 SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV 242 (294)
Q Consensus 165 ~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i 242 (294)
...+..+.++ +++.++...++.|..||. +++. ...........+..+++.+++ .+.++...++.|.+
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~ 208 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI--------TEFKIPTPASGPVGITKGNDD--ALWFVEIIGNKIGR 208 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECTTS--SEEEEETTTTEEEE
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE--------EEeeCCCCCCcceeEEECCCC--CEEEEccCCceEEE
Confidence 3456666665 556666666789999998 4431 111122234567889999987 46666666889999
Q ss_pred EeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 243 WELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 243 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
||. +++.. ..... .....+.+++++++|+++++...++.|..||.
T Consensus 209 ~~~-~g~~~-~~~~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 209 ITT-SGEIT-EFKIP--TPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ECT-TCCEE-EEECS--STTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred ECC-CCcEE-EEECC--CCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 999 55422 22122 34467899999999997777767888999986
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=2.3e-16 Score=124.61 Aligned_cols=232 Identities=12% Similarity=0.030 Sum_probs=144.0
Q ss_pred EEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEE-------------------EEeCCCCCceEEEe--
Q 022590 14 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE-------------------IRTQPLKPSLVVSA-- 72 (294)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~l~s~-- 72 (294)
+.|+ |+|+ +|+.++.++.|++||+.+++.......+...... +.|+| +++.++.+
T Consensus 86 ~~~s--pdg~-~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~ 161 (396)
T 3c5m_A 86 GFIS--TDER-AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEF 161 (396)
T ss_dssp CEEC--TTSS-EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHH
T ss_pred ceEC--CCCC-EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeee
Confidence 5676 9999 8989888999999999888765555544443323 35677 66655544
Q ss_pred ---eCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC------CcEEEEeccccccccccceeec
Q 022590 73 ---SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWT 143 (294)
Q Consensus 73 ---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~ 143 (294)
..+..|.+||+.+++...... +...+..+.|+|.++..|+..+.+ ..|.+||+....
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---------- 227 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQ----DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---------- 227 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC----------
T ss_pred ccCCCcceEEEEECCCCcEEeecc----CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc----------
Confidence 456789999998887665543 667789999999445555554433 358888876521
Q ss_pred CCCCCCCCceeeeceEEeecC--CCceeeccee--cceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCC
Q 022590 144 DLPSKFPTKYVQFPVFIASVH--SNYVDCNRWL--GDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPE 214 (294)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~--~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
...+..+ ...+..+.|+ ++.|+.++.+ +.|++||+.+++. ..+...+
T Consensus 228 --------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~--- 283 (396)
T 3c5m_A 228 --------------VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------EEVMVMP--- 283 (396)
T ss_dssp --------------CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------EEEEECC---
T ss_pred --------------eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-------EEeeeCC---
Confidence 0111111 2245566776 6766666543 4599999986642 1122111
Q ss_pred CCeeEEEEcc-cCCcceEEEEc----------------CCCeEEEEeccCCCceeeeecccc------ccCCCeEEEEEc
Q 022590 215 CDIWFIKFSC-DFHYNAAAIGN----------------REGKIFVWELQSSPPVLIARLSHA------QSKSPIRQTAMS 271 (294)
Q Consensus 215 ~~i~~~~~~~-~~~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~~~~~------~~~~~v~~~~~s 271 (294)
... ..|+| +++ +++.++ .++.|++||+.+++.......... .....+..++|+
T Consensus 284 -~~~-~~~s~~dg~--~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s 359 (396)
T 3c5m_A 284 -PCS-HLMSNFDGS--LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFT 359 (396)
T ss_dssp -SEE-EEEECSSSS--EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEEC
T ss_pred -CCC-CCccCCCCc--eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEc
Confidence 123 88999 884 555543 347899999987753222211100 000025668899
Q ss_pred cCCCEEEEecc-CCcEEEEec
Q 022590 272 YDGSTILSCCE-DGAIWRWDA 291 (294)
Q Consensus 272 ~~~~~l~s~~~-dg~i~vw~~ 291 (294)
|+|+.|+.++. ++...+|.+
T Consensus 360 ~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 360 PNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp TTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCeEEEEecCCCCceEEEE
Confidence 99998887654 565555544
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=8.5e-15 Score=112.56 Aligned_cols=216 Identities=8% Similarity=0.025 Sum_probs=148.5
Q ss_pred cCCeEEEEEcCCccccceec------ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeE
Q 022590 31 INGIIRVIDVSNEKLHKSFV------GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104 (294)
Q Consensus 31 ~dg~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 104 (294)
.++.|.++|.++++....+. ........+.+. ++.++++...++.|.+||..+++.+..+. .......
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~ 88 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRY 88 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcE
Confidence 37899999999988765442 122346778875 45677777778999999999999988886 4467899
Q ss_pred EEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC-----CceeecceecceEE
Q 022590 105 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS-----NYVDCNRWLGDFIL 179 (294)
Q Consensus 105 l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~l~ 179 (294)
+++++ ++.++++...++.|.+||..+.... ..+.... .....+.+.+..++
T Consensus 89 i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~-----------------------~~i~~g~~~~~~~~p~~i~~~~~~ly 144 (328)
T 3dsm_A 89 IHFLS-DEKAYVTQIWDYRIFIINPKTYEIT-----------------------GYIECPDMDMESGSTEQMVQYGKYVY 144 (328)
T ss_dssp EEEEE-TTEEEEEEBSCSEEEEEETTTTEEE-----------------------EEEECTTCCTTTCBCCCEEEETTEEE
T ss_pred EEEeC-CCeEEEEECCCCeEEEEECCCCeEE-----------------------EEEEcCCccccCCCcceEEEECCEEE
Confidence 99988 6665555547899999999874311 1111111 13344555666666
Q ss_pred Eee--CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC----------CeEEEEeccC
Q 022590 180 SKS--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE----------GKIFVWELQS 247 (294)
Q Consensus 180 ~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~ 247 (294)
++. .++.|.++|+.+++ ....+... .....+.++|++ .++++...+ +.|.++|..+
T Consensus 145 v~~~~~~~~v~viD~~t~~---------~~~~i~~g-~~p~~i~~~~dG--~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDK---------VVDELTIG-IQPTSLVMDKYN--KMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp EEECTTCCEEEEEETTTTE---------EEEEEECS-SCBCCCEECTTS--EEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred EEcCCCCCEEEEEECCCCe---------EEEEEEcC-CCccceEEcCCC--CEEEEECCCccCCccccCCceEEEEECCC
Confidence 555 48899999998764 34444432 345678899988 455555443 7899999988
Q ss_pred CCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 248 SPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.+........ .......++++|++++|..+.. .|.+||.++
T Consensus 213 ~~v~~~~~~~---~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 213 FTVEKQFKFK---LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEA 253 (328)
T ss_dssp TEEEEEEECC---TTCCCEEEEECTTSCEEEEESS--SEEEEETTC
T ss_pred CeEEEEEecC---CCCCceeEEEecCCCEEEEEcc--EEEEEECCC
Confidence 7533222221 1235789999999999988755 899999864
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=2.3e-14 Score=117.18 Aligned_cols=247 Identities=11% Similarity=-0.005 Sum_probs=158.8
Q ss_pred EeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC--CCceEEEee
Q 022590 16 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFA 93 (294)
Q Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~ 93 (294)
|..+|.+. ++++...++.|.++|..+++.+.++... ..+..+.|+| +++++++++.|+.|.+||+. +++.+..+.
T Consensus 161 ~~~d~~~~-~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 161 NDWDLENL-FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp SCCCGGGE-EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred cccCCCce-EEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 44445454 7788888999999999999998888743 4567999999 88999999999999999996 788887776
Q ss_pred ccCCCCCceeEEEEe----cCCCceEEee-ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC-c
Q 022590 94 GAGGHRNEVLSVDFH----PSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN-Y 167 (294)
Q Consensus 94 ~~~~~~~~v~~l~~~----~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 167 (294)
.......++|+ | ++++++++ ..++++.++|..+.+........... ......|.. .
T Consensus 238 ----~G~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~-------------~~~~~~~p~~r 299 (567)
T 1qks_A 238 ----IGSEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT-------------YDEQEYHPEPR 299 (567)
T ss_dssp ----CCSEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC-------------TTTCCEESCCC
T ss_pred ----cCCCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc-------------cccccccCCCc
Confidence 34457899999 6 66555554 55699999998774322111100000 000000111 2
Q ss_pred eeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 168 VDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 168 i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
+..+..+ ..+++....+|.|.++|....+. ..+..+. .......+.|+|+++ .++++...++.|.++|
T Consensus 300 va~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-------~~v~~i~-~~~~~~d~~~~pdgr-~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKETGKILLVDYTDLNN-------LKTTEIS-AERFLHDGGLDGSHR-YFITAANARNKLVVID 370 (567)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-------EEEEEEE-CCSSEEEEEECTTSC-EEEEEEGGGTEEEEEE
T ss_pred eEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-------ceeeeee-ccccccCceECCCCC-EEEEEeCCCCeEEEEE
Confidence 3333333 44566667789999999875431 1122222 234566789999995 3445556788999999
Q ss_pred ccCCCceeeeec-cccccCCCeEEEEEccCC-CEEEEec-cCCcEEEEecCC
Q 022590 245 LQSSPPVLIARL-SHAQSKSPIRQTAMSYDG-STILSCC-EDGAIWRWDAIP 293 (294)
Q Consensus 245 ~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~-~~l~s~~-~dg~i~vw~~~~ 293 (294)
+.+++....... ....|.+.-..+ ++|++ .+.+++. .++.|.++|..+
T Consensus 371 ~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 371 TKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 998864433333 222333222222 57874 4445553 568999999865
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.72 E-value=5.9e-15 Score=125.68 Aligned_cols=243 Identities=12% Similarity=-0.021 Sum_probs=149.4
Q ss_pred ceeEEEEEeecCCCceEEEEeecC-----CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCc------
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGIN-----GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDES------ 77 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~------ 77 (294)
..+..++|+ |||+ +||.++.+ ..|++||+.+++.+.. ..+...+..++|+| + +.|+.++.++.
T Consensus 163 ~~~~~~~~S--PDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 163 TALDAWAAS--DDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEEEC--TTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC------
T ss_pred EEEEeEEEC--CCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCccccccc
Confidence 356677776 9999 77766543 3699999999887543 22222346899999 7 77777766554
Q ss_pred --------EEEEEcCCCce--EEEeeccCCCCCceeEEEEecCCCceEEeeecCC-----cEEEEeccccccccccceee
Q 022590 78 --------VRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFTW 142 (294)
Q Consensus 78 --------i~vwd~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~~~~ 142 (294)
|.+|++.++.. ...+.. ..+...+..+.|+| ++.+|+..+.++ .|++||+.+...
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~-------- 306 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKI-------- 306 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEE--------
T ss_pred ccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCC--------
Confidence 88999977653 222321 12334588999999 887777766543 799999876310
Q ss_pred cCCCCCCCCceeeeceEEeecCCCceee-cceecceEEEeeC----CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCe
Q 022590 143 TDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKSV----DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 217 (294)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i 217 (294)
.....+..+...... +..+++.|+..+. .+.|.+||+.++. .......+.+...+
T Consensus 307 -------------~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 307 -------------GPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFDTVVPESKDNL 366 (741)
T ss_dssp -------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-------CEEEEEECCCSSEE
T ss_pred -------------cccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccEEEecCCCCeE
Confidence 001122222222222 2224777776665 3569999987631 01122223333445
Q ss_pred eEEEEcccCCcceEEEEcCCCeEEEEecc-CCCceeeeeccccccCCCeEEEEEccCCCEEE----EeccCCcEEEEecC
Q 022590 218 WFIKFSCDFHYNAAAIGNREGKIFVWELQ-SSPPVLIARLSHAQSKSPIRQTAMSYDGSTIL----SCCEDGAIWRWDAI 292 (294)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~----s~~~dg~i~vw~~~ 292 (294)
..+.+. ++ .++++...++..++|.+. .++ ....+.. .....+..+.++|+++.|+ +....+.|++||+.
T Consensus 367 ~~~~~~-~~--~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 367 ESVGIA-GN--RLFASYIHDAKSQVLAFDLDGK--PAGAVSL-PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEE-BT--EEEEEEEETTEEEEEEEETTSC--EEEECBC-SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEE-CC--EEEEEEEECCEEEEEEEeCCCC--ceeeccC-CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 566666 33 578888889988887665 232 2223321 2246688999999988666 33455789999986
Q ss_pred C
Q 022590 293 P 293 (294)
Q Consensus 293 ~ 293 (294)
+
T Consensus 441 t 441 (741)
T 1yr2_A 441 T 441 (741)
T ss_dssp T
T ss_pred C
Confidence 4
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=5.2e-14 Score=106.16 Aligned_cols=201 Identities=8% Similarity=0.049 Sum_probs=139.1
Q ss_pred ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeecc---CCCCCceeEEEEecCCCceEEeeec-CCcEEE
Q 022590 51 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGA---GGHRNEVLSVDFHPSDIYRIASCGM-DNTVKI 126 (294)
Q Consensus 51 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~~l~~~~~-dg~i~~ 126 (294)
++-..+.++++++ ++.++++...++.|.+||.. ++.+..+... .++...+..+++.+.++.++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4556789999999 78888888889999999986 6666555421 1244578999995327776666643 889999
Q ss_pred EeccccccccccceeecCCCCCCCCceeeeceEEe-ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 127 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 127 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
||... . ....+ ..+...+..++++ ++++++...++.|.+||....
T Consensus 105 ~d~~g-~-----------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-------- 152 (286)
T 1q7f_A 105 YNQYG-Q-----------------------FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-------- 152 (286)
T ss_dssp ECTTS-C-----------------------EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--------
T ss_pred ECCCC-c-----------------------EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC--------
Confidence 99443 1 11111 1233456677775 667777777899999996532
Q ss_pred ceeeeeee--cCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec
Q 022590 204 ADILQKYP--VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC 281 (294)
Q Consensus 204 ~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 281 (294)
.+..+. .....+..+++++++ .++++...++.|++||.... ....+...++...+..++++|+|+++++..
T Consensus 153 --~~~~~~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 153 --VLHKFGCSKHLEFPNGVVVNDKQ--EIFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp --EEEEEECTTTCSSEEEEEECSSS--EEEEEEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred --EEEEeCCCCccCCcEEEEECCCC--CEEEEECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence 233332 233468899999988 57777778899999997543 233333223335689999999999988888
Q ss_pred cCC-cEEEEecC
Q 022590 282 EDG-AIWRWDAI 292 (294)
Q Consensus 282 ~dg-~i~vw~~~ 292 (294)
.++ .|.+|+..
T Consensus 226 ~~~~~i~~~~~~ 237 (286)
T 1q7f_A 226 HNNFNLTIFTQD 237 (286)
T ss_dssp SSSCEEEEECTT
T ss_pred CCCEEEEEECCC
Confidence 776 99999864
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=1.2e-14 Score=112.82 Aligned_cols=217 Identities=10% Similarity=0.120 Sum_probs=135.8
Q ss_pred ceeEEEEEeecCCCceEEEEee---------cCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCC---C
Q 022590 9 ESFYTVSWACNVDGIPFLVAGG---------INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD---E 76 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g 76 (294)
..+...++ ||+ .++... .++.|.+||+.+++.. .+ ..+..++|+| +++.|+.++.+ +
T Consensus 15 ~~~~~~~~----dG~-~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~Sp-Dg~~la~~~~~~~~~ 83 (347)
T 2gop_A 15 AYLSDPRT----KGE-LVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISP-DGKKIAFMRANEEKK 83 (347)
T ss_dssp CEEEEEEE----ETT-EEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECT-TSSEEEEEEEETTTT
T ss_pred EEcccceE----CCc-EEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECC-CCCEEEEEEeccCCC
Confidence 45566666 787 555432 3678999999887653 33 5688999999 88888877654 3
Q ss_pred --cEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC---------------------------CcEEEE
Q 022590 77 --SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD---------------------------NTVKIW 127 (294)
Q Consensus 77 --~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d---------------------------g~i~~w 127 (294)
.|.+|++.+++...... +.. +..+.|+| ++..|+.++.+ ..|.+|
T Consensus 84 ~~~l~~~~~~~g~~~~l~~----~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILE----AKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp EEEEEEEETTTTEEEEEEE----ESE-EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred cceEEEEECCCCceEEEEc----CCC-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 37788888877665554 333 99999999 77777776632 468888
Q ss_pred eccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCC-------eEEEecCCCCCCC
Q 022590 128 SMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN-------EIVLWEPKMKEQS 198 (294)
Q Consensus 128 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~-------~i~iwd~~~~~~~ 198 (294)
|+.++. ....+.. . .+..+.|+ + +++++..++ ...+|.+.+++
T Consensus 158 d~~~~~-----------------------~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-- 209 (347)
T 2gop_A 158 DTESEE-----------------------VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-- 209 (347)
T ss_dssp ETTTTE-----------------------EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--
T ss_pred ECCCCe-----------------------EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--
Confidence 887631 1111222 2 56677776 5 666665432 33444443221
Q ss_pred CCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC--------CeEEEEeccCCCceeeeeccccccCCCeEE-EE
Q 022590 199 PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE--------GKIFVWELQSSPPVLIARLSHAQSKSPIRQ-TA 269 (294)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~-~~ 269 (294)
...+..+ ..+.. ++|+++ .|+..+.+ ..|.+|| +++ ...... .+...+.. +.
T Consensus 210 --------~~~l~~~-~~~~~--~spdg~--~l~~~~~~~~~~~~~~~~l~~~d--~~~--~~~l~~--~~~~~~~~~~~ 270 (347)
T 2gop_A 210 --------EEKMFEK-VSFYA--VDSDGE--RILLYGKPEKKYMSEHNKLYIYD--GKE--VMGILD--EVDRGVGQAKI 270 (347)
T ss_dssp --------EEEEEEE-ESEEE--EEECSS--CEEEEECCSSSCCCSSCEEEEEC--SSC--EEESST--TCCSEEEEEEE
T ss_pred --------eEEeccC-cceee--ECCCCC--EEEEEEccccCCccccceEEEEC--CCc--eEeccc--cCCcccCCccE
Confidence 1122222 33333 389985 55554432 4688888 443 222222 34466776 99
Q ss_pred EccCCCEEEEeccCCcEEEEecC
Q 022590 270 MSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 270 ~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
|+ ++ ++++++.++.+++| +.
T Consensus 271 ~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 271 KD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp ET-TE-EEEEEEETTEEEEE-EE
T ss_pred Ec-Cc-EEEEEecCCcEEEE-Ec
Confidence 99 88 89999999999999 74
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=1.6e-14 Score=111.19 Aligned_cols=211 Identities=9% Similarity=0.009 Sum_probs=139.1
Q ss_pred CcceEEEEeCCCCCceEEEeeCC------------------------CcEEEEEcCCCceEEEeeccCCCCCceeEEEEe
Q 022590 53 GDSINEIRTQPLKPSLVVSASKD------------------------ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 108 (294)
Q Consensus 53 ~~~v~~~~~~~~~~~~l~s~~~d------------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~ 108 (294)
-+.+.+++++| +++++++...+ ++|.+||..+++.+..+.. ++-..+..++++
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK--NLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT--TTCSSEEEEEEC
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC--CccCCceEEEEC
Confidence 46789999999 88888887777 4799999988988766542 345678999999
Q ss_pred cCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEee-CC
Q 022590 109 PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKS-VD 184 (294)
Q Consensus 109 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~-~d 184 (294)
| +++++++...++.|++||........ ..+.....+ .....+......++++ ++++++.+ .+
T Consensus 100 ~-~g~l~v~d~~~~~v~~~~~~g~~~~~-~~~~~~~~~------------g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 100 T-DGNYWVTDVALHQVFKLDPHSKEGPL-LILGRSMQP------------GSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp T-TSCEEEEETTTTEEEEECTTCSSCCS-EEESBTTBC------------CCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred C-CCCEEEEECCCCEEEEEeCCCCeEEE-EEecccCCC------------CCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 9 88888888889999999986521000 000000000 0001233456667775 45666665 68
Q ss_pred CeEEEecCCCCCCCCCCCCceeeeeeec----------CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeee
Q 022590 185 NEIVLWEPKMKEQSPGEGTADILQKYPV----------PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA 254 (294)
Q Consensus 185 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 254 (294)
+.|++||.. +. .+..+.. .-.....++++|++. .++++...++.|++|+..+++. ..
T Consensus 166 ~~I~~~~~~-g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g-~l~v~d~~~~~I~~~~~~~G~~--~~ 232 (329)
T 3fvz_A 166 SRIVQFSPS-GK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLD-QLCVADRENGRIQCFKTDTKEF--VR 232 (329)
T ss_dssp CEEEEECTT-SC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTT-EEEEEETTTTEEEEEETTTCCE--EE
T ss_pred CeEEEEcCC-CC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCC-EEEEEECCCCEEEEEECCCCcE--EE
Confidence 999999943 32 2222221 113378899999832 5778888899999999987763 33
Q ss_pred eccccccCCCeEEEEEcc------CCCEEEEeccCCcEEEEecCC
Q 022590 255 RLSHAQSKSPIRQTAMSY------DGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 255 ~~~~~~~~~~v~~~~~s~------~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.+....+...+..++++| +|+..++...+..|++|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 233 EIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 333335556788999999 444333344456899998653
No 189
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=2.3e-16 Score=134.36 Aligned_cols=206 Identities=11% Similarity=0.003 Sum_probs=134.5
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCc-----eeEEEEecCCCceEEeeecC-------
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNE-----VLSVDFHPSDIYRIASCGMD------- 121 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~~l~~~~~d------- 121 (294)
....+++|+| ++.+++++ |++|++||+.+++....+. +|... ...+.|+| ++++|+.++.+
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLE---NSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEEC---TTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSC
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEe---chhhhhhcccccceEECC-CCCEEEEEECCeeeEEEc
Confidence 3466899999 88888886 8999999999999877666 34432 34588999 88888888876
Q ss_pred --CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCC
Q 022590 122 --NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQ 197 (294)
Q Consensus 122 --g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~ 197 (294)
+.+.+||+.++. ...+..+...+...+|+ |+.|+.+ .++.|++||+.+++.
T Consensus 90 ~~~~~~~~d~~~~~------------------------~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 90 YTASYDIYDLNKRQ------------------------LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEEEEEEEETTTTE------------------------ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCC
T ss_pred cceEEEEEECCCCc------------------------EEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCce
Confidence 566799998742 11234466678888887 7788876 578999999987653
Q ss_pred CCCCCCceeeeeeecCC---------CCeeEEEEcccCCcceEEEEcCC-------------------------------
Q 022590 198 SPGEGTADILQKYPVPE---------CDIWFIKFSCDFHYNAAAIGNRE------------------------------- 237 (294)
Q Consensus 198 ~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~~~l~~~~~d------------------------------- 237 (294)
............+..+. .....+.||||++ .|+..+.|
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~--~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT--FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS--EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCC--EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 11100000000011111 1223588999995 66665321
Q ss_pred -----CeEEEEeccC---CCceeeeeccc----cccCCCeEEEEEccCCCEEEEec----cCCcEEEEecCC
Q 022590 238 -----GKIFVWELQS---SPPVLIARLSH----AQSKSPIRQTAMSYDGSTILSCC----EDGAIWRWDAIP 293 (294)
Q Consensus 238 -----g~i~i~d~~~---~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~----~dg~i~vw~~~~ 293 (294)
..|++||+.+ ++......+.. .++...+..++|+|||+.++... .+..|++||+++
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 1578888887 63211222221 12566799999999999766543 334799999754
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=7.3e-13 Score=100.36 Aligned_cols=236 Identities=9% Similarity=-0.043 Sum_probs=154.5
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee--cccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF--VGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
...+.++++. ++|. +.++...++.|..|+.. ++. ..+ ......+.++++.+ ++.++++...++.|..||. +
T Consensus 56 ~~~~~~i~~~--~~g~-l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 56 DAKVMCLTIS--SDGE-VWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TCCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-T
T ss_pred cCceeeEEEC--CCCC-EEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-C
Confidence 3567777776 8888 77776668899999976 332 222 22455789999999 7788887777889999998 5
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
++....... .....+..+++.+ ++.++++...++.|..||. +... .........
T Consensus 129 g~~~~~~~~--~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~----------------------~~~~~~~~~ 182 (299)
T 2z2n_A 129 GKIREYELP--NKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDI----------------------TEFKIPTPA 182 (299)
T ss_dssp CCEEEEECS--STTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCE----------------------EEEECSSTT
T ss_pred CCEEEecCC--CCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcE----------------------EEeeCCCCC
Confidence 554432211 2445789999998 7777777666789999998 4211 001111223
Q ss_pred Cceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEE
Q 022590 166 NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 243 (294)
Q Consensus 166 ~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~ 243 (294)
..+..+.++ +++.++...++.|..||. +++. ...........+..+++.+++ .+.++...++.|..|
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~ 251 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--------TEFKIPTPNARPHAITAGAGI--DLWFTEWGANKIGRL 251 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcE--------EEEECCCCCCCceeEEECCCC--CEEEeccCCceEEEE
Confidence 445666665 566666556789999998 4431 111122334668899999987 456665577899999
Q ss_pred eccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 244 ELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 244 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
|.. ++ ....... .+...+.++++ ++|++.++.+ .+.+..++.++
T Consensus 252 d~~-g~-~~~~~~~--~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 252 TSN-NI-IEEYPIQ--IKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp ETT-TE-EEEEECS--SSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCC-Cc-eEEEeCC--CCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 983 32 2222222 33467899999 8888777765 45677777653
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=9.5e-15 Score=113.72 Aligned_cols=237 Identities=10% Similarity=0.008 Sum_probs=147.6
Q ss_pred CCCceEEEEee------cCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee----------CCCcEEEEEc
Q 022590 20 VDGIPFLVAGG------INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS----------KDESVRLWNV 83 (294)
Q Consensus 20 ~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~ 83 (294)
++++ ++++.. .|+.|.+||..+++.+..+..+..+ .++|+| ++++++++. .+++|.+||.
T Consensus 13 ~~~~-~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 13 PQEN-RIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp CGGG-EEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCC-EEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 4565 555543 4789999999999988888776665 899999 888888876 3678999999
Q ss_pred CCCceEEEeeccCC---CCCceeEEEEecCCCceEEeeec--CCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 84 QTGICILIFAGAGG---HRNEVLSVDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 84 ~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
.+++.+..+..... +......++++| ++++|+++.. ++.|.+||+.+.+. +
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~-----------------------~ 144 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDY-----------------------V 144 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEE-----------------------E
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcE-----------------------E
Confidence 99988887764211 234578899999 8888887764 58999999998421 1
Q ss_pred EE-eecCCCce-eeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceee---eeeecCCCCeeEEEEcccCCcceEE
Q 022590 159 FI-ASVHSNYV-DCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADIL---QKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 159 ~~-~~~~~~~i-~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
.. +. ..... ..+... +..+++.+.||.+.+|+...... ..... ..+.....+ ..+.+++++. .++
T Consensus 145 ~~~i~-~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~-----~~~~~~~~~~~~~~~~~-~~~~~~~~g~--~~~ 215 (361)
T 2oiz_A 145 EDVTA-AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK-----VASQSRSKQMFSVKDDP-IFIAPALDKD--KAH 215 (361)
T ss_dssp EEEGG-GTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS-----EEEEEECCCCSCTTTSC-BCSCCEECSS--EEE
T ss_pred EEEec-CCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc-----EeeeccccceEcCCCCc-eEEEecccCC--EEE
Confidence 11 11 11100 001111 35677888899999998864221 00000 011111111 2233456663 455
Q ss_pred EEcCCCeEEEEeccCCCceeeeeccccc--------cCCCeEEEEEccCCCEEEEecc-----------CCcEEEEecCC
Q 022590 233 IGNREGKIFVWELQSSPPVLIARLSHAQ--------SKSPIRQTAMSYDGSTILSCCE-----------DGAIWRWDAIP 293 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~-----------dg~i~vw~~~~ 293 (294)
..+.++.+.++|+..........+.... .......++|+|+++.++++.. .+.|.+||+++
T Consensus 216 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t 295 (361)
T 2oiz_A 216 FVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT 295 (361)
T ss_dssp EEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT
T ss_pred EEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC
Confidence 5667899999999766433222211000 0011223789999888877643 34799999865
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=1.8e-13 Score=104.52 Aligned_cols=242 Identities=12% Similarity=0.084 Sum_probs=149.7
Q ss_pred eeEEEEEeecCCCceEEEE-------eecCCeEEEEEcCCccccceec----ccCcceEEEEeCCCC-CceEEEeeCCCc
Q 022590 10 SFYTVSWACNVDGIPFLVA-------GGINGIIRVIDVSNEKLHKSFV----GHGDSINEIRTQPLK-PSLVVSASKDES 77 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~----~h~~~v~~~~~~~~~-~~~l~s~~~dg~ 77 (294)
...+++|. ++|. ++++ +..++.|.+||..+++...... ++...+.++++++ + ++++++.. .+.
T Consensus 19 ~~~~~~~~--~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 19 GAEGPVFD--KNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADM-RLG 93 (314)
T ss_dssp TCEEEEEC--TTSC-EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEET-TTE
T ss_pred CccCceEC--CCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEEC-CCC
Confidence 45678887 8887 7777 6778999999987776532221 2456789999999 6 66555544 447
Q ss_pred EEEEEcCCCceEEE-eeccCC-CCCceeEEEEecCCCceEEeeecC---------------CcEEEEeccccccccccce
Q 022590 78 VRLWNVQTGICILI-FAGAGG-HRNEVLSVDFHPSDIYRIASCGMD---------------NTVKIWSMKEFWTYVEKSF 140 (294)
Q Consensus 78 i~vwd~~~~~~~~~-~~~~~~-~~~~v~~l~~~~~~~~~l~~~~~d---------------g~i~~wd~~~~~~~~~~~~ 140 (294)
|.+||.. ++.... .....+ ....+.+++++| +++++++...+ +.|..+|... ..
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~------ 164 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QM------ 164 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CE------
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCC-CE------
Confidence 8899987 665433 221111 123588999999 77777766554 4566665431 10
Q ss_pred eecCCCCCCCCceeeeceEEeecCCCceeeccee------cceEEE-eeCCCeEEEecCC-CCCCCCCCCCceeeeeeec
Q 022590 141 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL------GDFILS-KSVDNEIVLWEPK-MKEQSPGEGTADILQKYPV 212 (294)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~l~~-~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~ 212 (294)
.....+......+.++ ++.++. ...++.|.+||+. .+.. ........+..
T Consensus 165 ------------------~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~----~~~~~~~~~~~ 222 (314)
T 1pjx_A 165 ------------------IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI----ENKKVWGHIPG 222 (314)
T ss_dssp ------------------EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE----EEEEEEEECCC
T ss_pred ------------------EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc----ccceEEEECCC
Confidence 0001111223444444 434444 4567899999976 2210 00011222222
Q ss_pred CC-CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEE-EEeccCCcEEEEe
Q 022590 213 PE-CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI-LSCCEDGAIWRWD 290 (294)
Q Consensus 213 ~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~vw~ 290 (294)
+. ..+..+++++++ .++++...++.|.+||.++++..... . .+...+.+++++|+++.| ++...++.|..|+
T Consensus 223 ~~~~~p~~i~~d~~G--~l~v~~~~~~~i~~~d~~~g~~~~~~--~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 223 THEGGADGMDFDEDN--NLLVANWGSSHIEVFGPDGGQPKMRI--R--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CSSCEEEEEEEBTTC--CEEEEEETTTEEEEECTTCBSCSEEE--E--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCCCceEECCCC--CEEEEEcCCCEEEEEcCCCCcEeEEE--e--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEe
Confidence 22 457789999988 56666667889999998865433222 2 233568999999999955 5556678899998
Q ss_pred cCC
Q 022590 291 AIP 293 (294)
Q Consensus 291 ~~~ 293 (294)
+..
T Consensus 297 ~~~ 299 (314)
T 1pjx_A 297 WQR 299 (314)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=3.3e-14 Score=120.64 Aligned_cols=236 Identities=8% Similarity=-0.067 Sum_probs=143.7
Q ss_pred CCCceEEEEeecC-C----eEEEEEcCCcccccee------cccCcceEEEEeCCCCCceEEEeeCCC-----cEEEEEc
Q 022590 20 VDGIPFLVAGGIN-G----IIRVIDVSNEKLHKSF------VGHGDSINEIRTQPLKPSLVVSASKDE-----SVRLWNV 83 (294)
Q Consensus 20 ~~~~~~l~~~~~d-g----~i~iw~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~ 83 (294)
|+|+ +++....+ + .+.+.+...++....+ .+|...+..++||| ++++|+.+..++ +|++||+
T Consensus 81 ~dG~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGK-RYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETT-EEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEET
T ss_pred EECC-EEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEEC
Confidence 7888 55544332 2 3455554444432111 23445788999999 888887665543 8999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCc----------------EEEEeccccccccccceeecCCCC
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT----------------VKIWSMKEFWTYVEKSFTWTDLPS 147 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~----------------i~~wd~~~~~~~~~~~~~~~~~~~ 147 (294)
.+++...... ....+..++|+| ++..|+.++.++. |++|++.+....
T Consensus 159 ~tg~~~~~~~----~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~------------ 221 (710)
T 2xdw_A 159 DGAKELPDVL----ERVKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE------------ 221 (710)
T ss_dssp TTTEEEEEEE----EEECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG------------
T ss_pred CCCCCCcccc----cCcccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc------------
Confidence 9998766433 122367899999 8888888877765 999999763210
Q ss_pred CCCCceeeeceEEeecCCCceeeccee--cceEEEeeC-----CCeEEEecCCC------CCCCCCCCCceeeeeeecCC
Q 022590 148 KFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV-----DNEIVLWEPKM------KEQSPGEGTADILQKYPVPE 214 (294)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~-----d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~ 214 (294)
...+.....|...+..+.|+ |++|+..+. +..|.+||+.+ +.. ....+..+.
T Consensus 222 -------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~l~~~~ 286 (710)
T 2xdw_A 222 -------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL--------KWVKLIDNF 286 (710)
T ss_dssp -------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--------CCEEEECSS
T ss_pred -------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--------ceEEeeCCC
Confidence 00111222244556667776 777776654 57899999876 321 123333444
Q ss_pred CCeeEEEEcccCCcceEEEEcC---CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCc--EEEE
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNR---EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA--IWRW 289 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~--i~vw 289 (294)
..+.. .|+|+++ .+++.+.. .+.|.+||+.+.+......+........+..++|++++.++++...|+. |++|
T Consensus 287 ~~~~~-~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~ 364 (710)
T 2xdw_A 287 EGEYD-YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH 364 (710)
T ss_dssp SSCEE-EEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred CcEEE-EEeccCC-EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEE
Confidence 44443 5888885 23333332 3469999998764211122221111136888999988888888888885 5555
Q ss_pred ec
Q 022590 290 DA 291 (294)
Q Consensus 290 ~~ 291 (294)
++
T Consensus 365 ~~ 366 (710)
T 2xdw_A 365 DL 366 (710)
T ss_dssp ET
T ss_pred EC
Confidence 65
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=2.5e-14 Score=121.07 Aligned_cols=234 Identities=8% Similarity=0.003 Sum_probs=144.5
Q ss_pred cCCCceEEEEeecCC-----eEEEEEcCCcccccee------cccCcceEEEEeCCCCCceEE-----EeeCCCcEEEEE
Q 022590 19 NVDGIPFLVAGGING-----IIRVIDVSNEKLHKSF------VGHGDSINEIRTQPLKPSLVV-----SASKDESVRLWN 82 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~-----s~~~dg~i~vwd 82 (294)
+|+|+ +++....++ .|.+.+...++....+ .+|...+..++||| ++++|+ .|+.+.+|++||
T Consensus 76 ~~dG~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNG-RFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETT-EEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECC-EEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEE
Confidence 37888 666655443 3444454444432222 24555799999999 888888 455567899999
Q ss_pred cCCCceE-EEeeccCCCCCceeEEEEecCCCceEEeeecCCc-------------EEEEeccccccccccceeecCCCCC
Q 022590 83 VQTGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT-------------VKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~-------------i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
+.+++.+ .... .......++|+| ++..|+.++.|.. |++|++.+....
T Consensus 154 l~tg~~~~~~~~----~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~------------- 215 (695)
T 2bkl_A 154 VDSGEWSKVDVI----EGGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK------------- 215 (695)
T ss_dssp TTTCCBCSSCCB----SCCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-------------
T ss_pred CCCCCCcCCccc----CcccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-------------
Confidence 9998864 1111 111126899999 8888888887766 999999873211
Q ss_pred CCCceeeeceEEeecCCCceeeccee--cceEEEeeCCC----eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEE
Q 022590 149 FPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN----EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKF 222 (294)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (294)
...+.....+...+..+.|+ |++|+..+.++ .|.++|..+++ ...+..+........+
T Consensus 216 ------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----------~~~l~~~~~~~~~~~~ 279 (695)
T 2bkl_A 216 ------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----------FRLLVKGVGAKYEVHA 279 (695)
T ss_dssp ------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----------CEEEEECSSCCEEEEE
T ss_pred ------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----------eEEeecCCCceEEEEe
Confidence 01122223345567777776 77887777655 67777654332 2223333444455555
Q ss_pred cccCCcceEEEEc---CCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 223 SCDFHYNAAAIGN---REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 223 ~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+++. +++... .++.|.+||+.+.+......+........+..++|+ ++.++++...|+..++|.+.
T Consensus 280 -~~g~--l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 280 -WKDR--FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp -ETTE--EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred -cCCc--EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 6663 444443 368899999987653111122111223568888998 77788889999998888654
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=6.3e-13 Score=105.05 Aligned_cols=248 Identities=10% Similarity=0.017 Sum_probs=157.2
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCC--cEEEEEcCCC
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE--SVRLWNVQTG 86 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~ 86 (294)
.....++|. ++|+ ++++...++.|++||.++++....... ..... ++|++ +++.|+++..++ .|.+++...+
T Consensus 131 ~~P~~la~d--~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAV--GNNT-VLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEEC--STTE-EEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEe--CCCC-EEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCC
Confidence 356778886 8898 788877889999999987766554443 23334 99999 777888887766 7888888766
Q ss_pred ceEEEeeccCC-CCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 87 ICILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 87 ~~~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
.....+..... ....+.+++++|.++. |+.+..++.|+.||............ ....+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~-------------------~~~g~~ 264 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQL-------------------ELSGSL 264 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEEC-------------------CCCSCC
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecc-------------------cccCCC
Confidence 55444411111 4456789999994455 44466788999999876321100000 001111
Q ss_pred Cc--eeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee------------cCCCCeeEEEEcccCCc
Q 022590 166 NY--VDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP------------VPECDIWFIKFSCDFHY 228 (294)
Q Consensus 166 ~~--i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~ 228 (294)
.. ...++|+ +.++++-...+.|+.|+...... .+.... ..-.....+++++++
T Consensus 265 ~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~--------~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-- 334 (409)
T 3hrp_A 265 GTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECE--------WFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-- 334 (409)
T ss_dssp CCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE--------EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC--
T ss_pred CCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEE--------EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC--
Confidence 11 1266665 44555656778999998764210 000000 002347789999998
Q ss_pred ceEEEEc-CCCeEEEEeccCCCceeeeecc-cc---------ccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 229 NAAAIGN-REGKIFVWELQSSPPVLIARLS-HA---------QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 229 ~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-~~---------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.++++-. .++.|+.|++.+++.....-.. .. ..-.....++++++|.++++-..++.|+.++++
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 4677777 7899999997766422111110 00 012457899999999888888888999888763
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=3.7e-12 Score=96.51 Aligned_cols=238 Identities=7% Similarity=-0.064 Sum_probs=157.4
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc-eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG 86 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 86 (294)
...+.++++. ++|+ +.++...++.|.+||.. ++... .+..+...+.++++.+ ++.++++...++.|..+|.. +
T Consensus 19 ~~~p~~i~~d--~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 19 DSGPYGITSS--EDGK-VWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TCCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeeEC--CCCC-EEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-C
Confidence 4567777776 8898 67766678999999987 54332 2223346789999998 77777777667889999987 5
Q ss_pred ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC
Q 022590 87 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN 166 (294)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
+.. .+... .....+.++++.+ ++.++++...++.|..+|... .. ..........
T Consensus 93 ~~~-~~~~~-~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~----------------------~~~~~~~~~~ 146 (300)
T 2qc5_A 93 GFT-EYPLP-QPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADG-TI----------------------YEYDLPNKGS 146 (300)
T ss_dssp CEE-EEECS-STTCCEEEEEECS-TTCEEEEETTTTEEEEECTTS-CE----------------------EEEECSSTTC
T ss_pred CeE-EecCC-CCCCCCccceECC-CCCEEEEccCCCeEEEECCCC-CE----------------------EEccCCCCCC
Confidence 543 33311 2346789999998 778777776678899998763 11 0111111233
Q ss_pred ceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 167 YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 167 ~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
.+..+.++ +++.++...++.|..+|. .++. .....+.....+..+++.+++ .+.++....+.|.+|+
T Consensus 147 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQNNSIGRITN-TGKL--------EEYPLPTNAAAPVGITSGNDG--ALWFVEIMGNKIGRIT 215 (300)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECTTS--SEEEEETTTTEEEEEC
T ss_pred CceeEEECCCCCEEEEecCCCeEEEECC-CCcE--------EEeeCCCCCCCcceEEECCCC--CEEEEccCCCEEEEEc
Confidence 45666665 665666556788999998 3321 111122234567889999887 4666666677899999
Q ss_pred ccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 245 LQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
. +++.. ..... .....+.+++++++|++.++...++.|..|+..
T Consensus 216 ~-~g~~~-~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 216 T-TGEIS-EYDIP--TPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp T-TCCEE-EEECS--STTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred C-CCcEE-EEECC--CCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 8 44322 22222 334568899999999977777677889888863
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=8.1e-13 Score=108.16 Aligned_cols=245 Identities=9% Similarity=0.026 Sum_probs=159.8
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcC--CccccceecccCcceEEEEeC----CCCCceEEEee-CCCcEEEEE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQ----PLKPSLVVSAS-KDESVRLWN 82 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~~-~dg~i~vwd 82 (294)
.+..+.|+ |||+ ++++++.|+.|.+||+. +++.+.++... .....++|+ | ++++++++. .+++|.++|
T Consensus 198 ~p~~v~~S--pDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 198 AVHISRLS--ASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp CEEEEEEC--TTSC-EEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEE
T ss_pred CccceEEC--CCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCC-CCCEEEEEEccCCeEEEEE
Confidence 44566665 9999 88889999999999995 77777777653 346789999 6 676666554 569999999
Q ss_pred cCCCceEEEeeccCC-------CC-CceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCcee
Q 022590 83 VQTGICILIFAGAGG-------HR-NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~-------~~-~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
..+.+.+..+..... |. ..+..+..++.+..+++....+|.|.++|......
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-------------------- 332 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-------------------- 332 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE--------------------
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc--------------------
Confidence 999998887763110 22 26788888885566677777789999999876211
Q ss_pred eeceEEeecCCCceeeccee--cceEEEee-CCCeEEEecCCCCCCCCCCCCceeeeeeec-CCC--CeeEEE-EcccCC
Q 022590 155 QFPVFIASVHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPV-PEC--DIWFIK-FSCDFH 227 (294)
Q Consensus 155 ~~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~--~i~~~~-~~~~~~ 227 (294)
..+..+ ........+.|+ +++++++. .++.|.++|+.+++ ....... ... +-.... +.|++.
T Consensus 333 -~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k---------l~~~i~vgg~~Phpg~g~~~~~p~~g 401 (567)
T 1qks_A 333 -LKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK---------LVAIEDTGGQTPHPGRGANFVHPTFG 401 (567)
T ss_dssp -EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE---------EEEEEECSSSSBCCTTCEEEEETTTE
T ss_pred -ceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc---------EEEEEeccCcCCCCccceeeECCCCC
Confidence 001111 122334455565 67766554 67899999999765 2333332 111 001222 577653
Q ss_pred cceEEEEc-CCCeEEEEeccCCC-----ceeeeeccccccCCCeEEEEEccCCCEEEEecc-------CCcEEEEecCC
Q 022590 228 YNAAAIGN-REGKIFVWELQSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE-------DGAIWRWDAIP 293 (294)
Q Consensus 228 ~~~l~~~~-~dg~i~i~d~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------dg~i~vw~~~~ 293 (294)
.+.+++. .++.|.++|..+.+ ...+..+...+ ..-..+..+|++++|.+... .+.|.|+|+.+
T Consensus 402 -~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 402 -PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp -EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred -cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 3445543 56899999998732 22334443211 22244778999999988652 45899999864
No 198
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.65 E-value=9.5e-15 Score=113.03 Aligned_cols=174 Identities=10% Similarity=-0.000 Sum_probs=126.6
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc-----------eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCc
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGI-----------CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 123 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~ 123 (294)
+++.+++++ ...++++|+.++ +++|++.... ..... .+.. |+.++| ++..|+++ .++.
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~----~lp~-V~~l~f---d~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK----EIPD-VIFVCF---HGDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE----ECTT-EEEEEE---ETTEEEEE-ESSE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe----eCCC-eeEEEE---CCCEEEEE-cCCc
Confidence 689999999 788899999875 5569875433 11222 2666 999999 55777777 8899
Q ss_pred EEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 124 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 124 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
|++||+++.. .......|...+.++.+....++++..||.+.+||+..+..
T Consensus 108 l~v~dv~sl~-----------------------~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~------ 158 (388)
T 1xip_A 108 LYSLDLEELS-----------------------EFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST------ 158 (388)
T ss_dssp EEEEESSSTT-----------------------CEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE------
T ss_pred EEEEEchhhh-----------------------ccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcc------
Confidence 9999999842 12223445556677666654588899999999999986642
Q ss_pred ceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc-------ccccCCCeEEEEEccCCCE
Q 022590 204 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-------HAQSKSPIRQTAMSYDGST 276 (294)
Q Consensus 204 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~ 276 (294)
.. ....+.+++|+|+| ++.|..||.+++|+....+......+. +.+|...|.++.|.+++.+
T Consensus 159 ---~~----~~~~Vs~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 159 ---KQ----LAQNVTSFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp ---EE----EEESEEEEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred ---cc----ccCCceEEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 11 23469999999998 577889999999988876521122221 1135688999999999998
Q ss_pred EEE
Q 022590 277 ILS 279 (294)
Q Consensus 277 l~s 279 (294)
|++
T Consensus 228 lv~ 230 (388)
T 1xip_A 228 LAV 230 (388)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=3.7e-13 Score=101.98 Aligned_cols=204 Identities=7% Similarity=-0.112 Sum_probs=136.6
Q ss_pred ccceecccCcceEEEEeCCCCCc-eEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCc
Q 022590 45 LHKSFVGHGDSINEIRTQPLKPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 123 (294)
Q Consensus 45 ~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~ 123 (294)
.+..+..+.....+++|+| +++ +++++..++.|..||..++ ...+. .+...+.+++++| ++.++++...++.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~---~~~~~~~~l~~~~-dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEM---HPSHHQNGHCLNK-QGHLIACSHGLRR 91 (296)
T ss_dssp CCEEEECCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEE---SSCSSEEEEEECT-TCCEEEEETTTTE
T ss_pred cEEEEecCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEE---CCCCCcceeeECC-CCcEEEEecCCCe
Confidence 3445555666788999999 666 8888888999999999877 55555 3667899999999 8887777777789
Q ss_pred EEEEeccccccccccceeecCCCCCCCCceeeeceEEee-cCCCceeeccee--cceEEE----ee-------------C
Q 022590 124 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL--GDFILS----KS-------------V 183 (294)
Q Consensus 124 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--~~~l~~----~~-------------~ 183 (294)
|.+||..++.... ...... .....+..+.++ |+++++ ++ .
T Consensus 92 i~~~d~~~g~~~~--------------------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~ 151 (296)
T 3e5z_A 92 LERQREPGGEWES--------------------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELP 151 (296)
T ss_dssp EEEECSTTCCEEE--------------------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSS
T ss_pred EEEEcCCCCcEEE--------------------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCC
Confidence 9999986532100 000000 111234556665 666665 33 1
Q ss_pred CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEecc-CCCc-eeeeecccccc
Q 022590 184 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ-SSPP-VLIARLSHAQS 261 (294)
Q Consensus 184 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~-~~~~~~~~~~~ 261 (294)
.+.|..++.. ++ +............++|+|+++ .+++.+.++.|++|++. .++. .....+. .+
T Consensus 152 ~~~l~~~~~~-g~----------~~~~~~~~~~~~gi~~s~dg~--~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~--~~ 216 (296)
T 3e5z_A 152 GRWVFRLAPD-GT----------LSAPIRDRVKPNGLAFLPSGN--LLVSDTGDNATHRYCLNARGETEYQGVHFT--VE 216 (296)
T ss_dssp SCEEEEECTT-SC----------EEEEECCCSSEEEEEECTTSC--EEEEETTTTEEEEEEECSSSCEEEEEEEEC--CS
T ss_pred CcEEEEECCC-CC----------EEEeecCCCCCccEEECCCCC--EEEEeCCCCeEEEEEECCCCcCcCCCeEee--CC
Confidence 3466666654 21 233334455678899999994 56888888999999997 3432 1112221 33
Q ss_pred CCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 262 KSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 262 ~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
...+..++++++|+++++. ++.|.+|+.+
T Consensus 217 ~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 217 PGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 4557789999999877766 7889999865
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.64 E-value=2.4e-12 Score=100.36 Aligned_cols=236 Identities=8% Similarity=-0.063 Sum_probs=146.3
Q ss_pred EEEEeecCCCceEEEEee----------cCCeEEEEEcCCccccceeccc-------CcceEEEEeCCCCCceEEEeeC-
Q 022590 13 TVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH-------GDSINEIRTQPLKPSLVVSASK- 74 (294)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~- 74 (294)
.++++ |||+ +++++. .++.|.+||..+.+.+..+... ......++|+| ++++|+.+..
T Consensus 70 ~i~~s--pDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAA--HSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFA 145 (373)
T ss_pred CeEEC--CCCC-EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecC
Confidence 55555 9999 666664 3678999999988877766432 12346899999 8888887764
Q ss_pred -CCcEEEEEcCCCceEEE-eeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCc
Q 022590 75 -DESVRLWNVQTGICILI-FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 152 (294)
Q Consensus 75 -dg~i~vwd~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
++.|.++| .+++.+.. +. ... ++.+.|.+...+++.+.||.+.++|. ..........
T Consensus 146 ~~~~v~viD-~t~~~~~~~i~----~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~------------ 204 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQLLS----SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLV------------ 204 (373)
T ss_pred CCCeEEEEE-CCCCEEeEEcC----CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEec------------
Confidence 57899999 99988777 54 222 24555645567778888999999999 6322100000
Q ss_pred eeeeceEEeecCCCce-eeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec----------CCCCeeE
Q 022590 153 YVQFPVFIASVHSNYV-DCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV----------PECDIWF 219 (294)
Q Consensus 153 ~~~~~~~~~~~~~~~i-~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~ 219 (294)
.+.. ....++ ....+. +..++..+.++.+.+.|+...... .+..+.. .......
T Consensus 205 ---~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~-------v~~~~~~~~~~~~~~~~~p~g~~~ 271 (373)
T 2mad_H 205 ---GAML---TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT-------NKAPIDALSGGRKADTWRPGGWQQ 271 (373)
T ss_pred ---cccc---cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce-------EeeeeeecCCcccccceecCceEe
Confidence 0000 001111 111121 233333346788999998654211 1111111 1122445
Q ss_pred EEEcccCCcceEEEEc----------CCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC-EEEEec-cCCcEE
Q 022590 220 IKFSCDFHYNAAAIGN----------REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCC-EDGAIW 287 (294)
Q Consensus 220 ~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~ 287 (294)
+.++|+++ .+++.. ..+.|.++|+.+.+.. ..+... .....++|+|||+ +++++. .++.|.
T Consensus 272 ~~~s~d~~--~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv--~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 272 VAYLKSSD--GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS--SQISLG---HDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred EEECCCCC--EEEEEeccCCcccccCCCCeEEEEECCCCEEE--EEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 78899885 344332 2467999999988643 333311 3578999999999 777777 589999
Q ss_pred EEecCC
Q 022590 288 RWDAIP 293 (294)
Q Consensus 288 vw~~~~ 293 (294)
++|+++
T Consensus 345 ViD~~t 350 (373)
T 2mad_H 345 IYDAGA 350 (373)
T ss_pred EEECCC
Confidence 999875
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=1.2e-11 Score=93.70 Aligned_cols=235 Identities=8% Similarity=-0.053 Sum_probs=152.1
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc-eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
..+.++++. ++|+ +.++...++.|..+|.. ++... .+......+.++++.+ ++.++++...++.|..+|.. ++
T Consensus 62 ~~~~~i~~~--~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 62 AKVMCLIVS--SLGD-IWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp CCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SC
T ss_pred CcceeEEEC--CCCC-EEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CC
Confidence 456777775 8887 66666667899999987 54421 2222346789999998 77887777768899999987 55
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
... +.. ......+.++++.+ ++.++++...++.|..+|... .. .......+...
T Consensus 136 ~~~-~~~-~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g-~~----------------------~~~~~~~~~~~ 189 (300)
T 2qc5_A 136 IYE-YDL-PNKGSYPAFITLGS-DNALWFTENQNNSIGRITNTG-KL----------------------EEYPLPTNAAA 189 (300)
T ss_dssp EEE-EEC-SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTC-CE----------------------EEEECSSTTCC
T ss_pred EEE-ccC-CCCCCCceeEEECC-CCCEEEEecCCCeEEEECCCC-cE----------------------EEeeCCCCCCC
Confidence 442 221 12445789999998 777666666678899998732 10 01111122344
Q ss_pred eeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 168 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
+..+.++ +++.++....+.|.+||. +++. ...........+..+++.+++ .+.++...++.|..||.
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEI--------SEYDIPTPNARPHAITAGKNS--EIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEEECT
T ss_pred cceEEECCCCCEEEEccCCCEEEEEcC-CCcE--------EEEECCCCCCCceEEEECCCC--CEEEeccCCCeEEEECC
Confidence 5666665 556665556778999998 3321 111122234567889999987 45666666789999998
Q ss_pred cCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 246 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
. ++. ...... .....+.+++++++|++.++.. . .|..+|.+
T Consensus 259 ~-g~~-~~~~~~--~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 259 D-NTI-QEYQLQ--TENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp T-SCE-EEEECC--STTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred C-CcE-EEEECC--ccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 3 332 222222 2335688999999998777665 4 67777654
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=6.9e-12 Score=95.03 Aligned_cols=233 Identities=8% Similarity=0.014 Sum_probs=144.0
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
..--.+..|+ |++..++++...++.|..||..+++. ..+. ....+.++++++ +++++++ . +..|.+||..+++
T Consensus 12 ~~~~Egp~w~--~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 12 CRCGESPVWE--EVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CSBEEEEEEE--TTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTE
T ss_pred CccccCCeEE--CCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCc
Confidence 3445577887 75444778888889999999987664 3332 457899999999 7775554 4 5679999998776
Q ss_pred eEEEeeccCC-CCCceeEEEEecCCCceEEeeecC---------CcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 88 CILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGMD---------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 88 ~~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
.........+ ....++.++++| +++++++...+ ..-.+|.+.... .
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-----------------------~ 140 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDH-----------------------H 140 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-----------------------C
T ss_pred EEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCC-----------------------C
Confidence 5443331111 224588999999 77766654322 234555554310 0
Q ss_pred eEEeecCCCceeeccee--cceE-EEeeCCCeEEEecCC--CCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEE
Q 022590 158 VFIASVHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPK--MKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~--~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 232 (294)
.............++|+ ++.+ ++.+.++.|.+||+. ++.. .....+..+......+..+++.+++ ++.+
T Consensus 141 ~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~----~~~~~~~~~~~~~~~p~g~~~d~~G--~lwv 214 (297)
T 3g4e_A 141 VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI----SNRRSVYKLEKEEQIPDGMCIDAEG--KLWV 214 (297)
T ss_dssp EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE----EEEEEEEECCGGGCEEEEEEEBTTS--CEEE
T ss_pred EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc----cCcEEEEECCCCCCCCCeeEECCCC--CEEE
Confidence 11111222334567776 5555 555667899999874 3321 0011222222223457789999988 5666
Q ss_pred EEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEc-cCCCEEEEec
Q 022590 233 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCC 281 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~ 281 (294)
+....+.|..||..+++....... +...+++++|. |+++.|..++
T Consensus 215 a~~~~~~v~~~d~~tG~~~~~i~~----p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGKRLQTVKL----PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEETTTEEEEECTTTCCEEEEEEC----SSSBEEEEEEESGGGCEEEEEE
T ss_pred EEcCCCEEEEEcCCCceEEEEEEC----CCCCceEEEEeCCCCCEEEEEc
Confidence 666778899999987764333322 23568999998 8887665443
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.60 E-value=1.2e-12 Score=101.03 Aligned_cols=238 Identities=10% Similarity=0.027 Sum_probs=149.2
Q ss_pred EEEeecCCCceEEEEee----------cCCeEEEEEcCCccccceecccC-------cceEEEEeCCCCCceEEEeeC--
Q 022590 14 VSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGHG-------DSINEIRTQPLKPSLVVSASK-- 74 (294)
Q Consensus 14 ~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~s~~~-- 74 (294)
++++ |||+ +++++. .++.|.+||..+++.+.++.... .....++|+| ++++++.+..
T Consensus 83 va~s--pDG~-~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~ 158 (386)
T 3sjl_D 83 PVVA--DDGS-FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSP 158 (386)
T ss_dssp EEEC--TTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSS
T ss_pred EEEC--CCCC-EEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCC
Confidence 6665 9999 665554 36789999999999888775321 2456799999 8887777753
Q ss_pred CCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCcee
Q 022590 75 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 154 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (294)
++.|.++|+.+++.+..+.. .+. ...+ |.+...+++.+.||.+.+.++........ ... .
T Consensus 159 ~~~VsVID~~t~~vv~tI~v----~g~--~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~---~~~---~------- 218 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDV----PDC--YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEI---THT---E------- 218 (386)
T ss_dssp SCEEEEEETTTTEEEEEEEC----CSE--EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEE---EEC---C-------
T ss_pred CCeEEEEECCCCcEEEEEEC----CCc--ceee-cCCCceeEEECCCCCEEEEECCCCCeEEE---eec---c-------
Confidence 68999999999999988863 221 2223 43667788888999999999876211100 000 0
Q ss_pred eeceEEeecCCCcee-eccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee----------cCCCCeeEE
Q 022590 155 QFPVFIASVHSNYVD-CNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP----------VPECDIWFI 220 (294)
Q Consensus 155 ~~~~~~~~~~~~~i~-~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~ 220 (294)
.+..-..++. ...|. |.+++ .+.+|.+.+.|+...... ....+. ........+
T Consensus 219 -----~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~-------v~~~~~~~~~~~~~~g~~p~g~q~~ 285 (386)
T 3sjl_D 219 -----VFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK-------FLPAVEALTEAERADGWRPGGWQQV 285 (386)
T ss_dssp -----CCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE-------ECCCEESSCHHHHHTTEEECSSSCE
T ss_pred -----eeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce-------eecceeccccccccccccCCCccee
Confidence 0000011111 12332 44444 455899999999765321 111111 001233457
Q ss_pred EEcccCCcceEEEEc--------CCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC-EEEEe-ccCCcEEEEe
Q 022590 221 KFSCDFHYNAAAIGN--------REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSC-CEDGAIWRWD 290 (294)
Q Consensus 221 ~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~-~~dg~i~vw~ 290 (294)
+++++++..|++... ..+.|.++|+.+.+.+....+. ..+..+++++|++ +|+++ ..++.|.++|
T Consensus 286 a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-----~~~~~lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 286 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-----HEIDSINVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----EEECEEEECSSSSCEEEEEETTTTEEEEEE
T ss_pred eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-----CCcceEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 778888533333321 1357999999998754443332 3578999999997 66664 5689999999
Q ss_pred cCC
Q 022590 291 AIP 293 (294)
Q Consensus 291 ~~~ 293 (294)
..+
T Consensus 361 ~~t 363 (386)
T 3sjl_D 361 AES 363 (386)
T ss_dssp TTT
T ss_pred CCC
Confidence 864
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=5.5e-13 Score=99.62 Aligned_cols=197 Identities=7% Similarity=-0.082 Sum_probs=133.2
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec-ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV-GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
..+.++++. ++|+ ++++.. ++.|.+||....... .+. .....+..+++.+ +++++++...++.|.+|+..+..
T Consensus 67 ~~p~~i~~~--~~g~-l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 67 YQPQGLAVD--GAGT-VYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CSCCCEEEC--TTCC-EEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCS
T ss_pred CCcceeEEC--CCCC-EEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCce
Confidence 456677776 8887 666655 889999998765432 232 2335789999999 77888777778899999765544
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
...... .....+.+++++| +++++++...++.|.+||...... ......+...
T Consensus 141 ~~~~~~---~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~-----------------------~~~~~~~~~~ 193 (270)
T 1rwi_B 141 QTVLPF---TGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQ-----------------------VVLPFTDITA 193 (270)
T ss_dssp CEECCC---CSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCE-----------------------EECCCSSCCS
T ss_pred eEeecc---ccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCce-----------------------EeecccCCCC
Confidence 332221 2334678999999 777777777788999999876211 1111112244
Q ss_pred eeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 168 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
+..++++ +.++++...++.|.+||...... ..........+..+++++++ .++++...++.|+++++
T Consensus 194 p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 194 PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS---------TVLPFTGLNTPLAVAVDSDR--TVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEEEECTTCCEEEEETTTSCEEEECTTCSCC---------EECCCCSCSCEEEEEECTTC--CEEEEEGGGTEEEEECC
T ss_pred ceEEEECCCCCEEEEECCCCcEEEEcCCCCcc---------eeeccCCCCCceeEEECCCC--CEEEEECCCCEEEEEcC
Confidence 5667776 55666666688999999865431 11111122457889999988 57888888999999998
Q ss_pred cCCC
Q 022590 246 QSSP 249 (294)
Q Consensus 246 ~~~~ 249 (294)
...+
T Consensus 263 ~~~~ 266 (270)
T 1rwi_B 263 LEHH 266 (270)
T ss_dssp CGGG
T ss_pred CCcc
Confidence 7654
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.57 E-value=2.4e-12 Score=96.17 Aligned_cols=179 Identities=13% Similarity=0.065 Sum_probs=126.9
Q ss_pred CceEEEeeCCCcEEEEEcCCCceEEEeeccCCCC-CceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecC
Q 022590 66 PSLVVSASKDESVRLWNVQTGICILIFAGAGGHR-NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144 (294)
Q Consensus 66 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 144 (294)
+++|++++.|+.|.+||.++++.+..+.. +. ..+.++.+.| ++++++ +.++.|..||. +++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~----------- 66 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPL---EKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGR----------- 66 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEEC---CTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSC-----------
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCC---CccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCC-----------
Confidence 57899999999999999999999999883 44 4689999999 888777 34678999998 422
Q ss_pred CCCCCCCceeeeceEEeecC-CCceeeccee--cceEEEeeC-CCeEEEecCCCCCCCCCCCCceeeeeeec------CC
Q 022590 145 LPSKFPTKYVQFPVFIASVH-SNYVDCNRWL--GDFILSKSV-DNEIVLWEPKMKEQSPGEGTADILQKYPV------PE 214 (294)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~--~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~ 214 (294)
.+..+..+ ...+.++.+. |+++++.+. ++.+..+|. +++ .+..+.. +.
T Consensus 67 ------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk---------~l~~~~~~~~~~~~~ 124 (276)
T 3no2_A 67 ------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGE---------VLSKTEFETGIERPH 124 (276)
T ss_dssp ------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSC---------EEEEEEECCSCSSGG
T ss_pred ------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCC---------EEEEEeccCCCCccc
Confidence 12222222 1234444443 888888777 778888886 333 2222221 11
Q ss_pred CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.....+++.+++ .++++...++.|..||.+ ++.+...... ....++...++|+++++++.++.|..+|.+
T Consensus 125 ~~~~~v~~~~~G--~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKG--NYLVPLFATSEVREIAPN-GQLLNSVKLS-----GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTS--CEEEEETTTTEEEEECTT-SCEEEEEECS-----SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCC--CEEEEecCCCEEEEECCC-CCEEEEEECC-----CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 233445677777 689999999999999998 7644443332 345667888999999999888889888865
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=2.3e-13 Score=105.37 Aligned_cols=174 Identities=9% Similarity=-0.018 Sum_probs=126.6
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc---------cc-ceecccCcceEEEEeCCCCCceEEEeeCCCcE
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---------LH-KSFVGHGDSINEIRTQPLKPSLVVSASKDESV 78 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i 78 (294)
.+++.++++ +... ++++|+.+ .+.+|++++.+ .. .....+.. |+.|+| ++..|+++ .++.|
T Consensus 38 ~~~nlLais--~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l 108 (388)
T 1xip_A 38 ASLQNLDIS--NSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNAL 108 (388)
T ss_dssp SCCBCEEEE--TTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEE
T ss_pred ccccEEEEc--CCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcE
Confidence 468899998 7777 89999888 56669876543 11 12234666 999999 56788888 88999
Q ss_pred EEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
++||+.+........ .|..++.++.+.+ . + ++++..||.+.+||+.... ..
T Consensus 109 ~v~dv~sl~~~~~~~---~~~~~v~~i~~~~-p-~-~av~~~dG~L~v~dl~~~~-----------------------~~ 159 (388)
T 1xip_A 109 YSLDLEELSEFRTVT---SFEKPVFQLKNVN-N-T-LVILNSVNDLSALDLRTKS-----------------------TK 159 (388)
T ss_dssp EEEESSSTTCEEEEE---ECSSCEEEEEECS-S-E-EEEEETTSEEEEEETTTCC-----------------------EE
T ss_pred EEEEchhhhccCccc---eeecceeeEEecC-C-C-EEEEECCCCEEEEEccCCc-----------------------cc
Confidence 999998777655555 4777888888775 3 3 8888999999999998631 11
Q ss_pred EEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee------e---cCCCCeeEEEEcccCCcc
Q 022590 159 FIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------P---VPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------~---~~~~~i~~~~~~~~~~~~ 229 (294)
.+...|+|++|+.+-++.|..||.+++|+....+. .....+ . .+...+.++.|.+++ .
T Consensus 160 ----~~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~-------~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~--~ 226 (388)
T 1xip_A 160 ----QLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEM-------EKQFEFSLPSELEELPVEEYSPLSVTILSPQ--D 226 (388)
T ss_dssp ----EEEESEEEEEECSSEEEEEETTSCEEEEEEETTEE-------EEEEEECCCHHHHTSCTTTSEEEEEEESSSS--E
T ss_pred ----cccCCceEEEEcCCceEEEEcCCcEEEEcCCCccc-------cccceecCCcccccccCCCeeEEEEEEecCC--e
Confidence 13458999999955588999999999998875431 002222 1 256779999999987 4
Q ss_pred eEEE
Q 022590 230 AAAI 233 (294)
Q Consensus 230 ~l~~ 233 (294)
++++
T Consensus 227 flv~ 230 (388)
T 1xip_A 227 FLAV 230 (388)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=1.1e-11 Score=94.25 Aligned_cols=229 Identities=7% Similarity=-0.074 Sum_probs=140.6
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
........|. |+|+.+++++..++.|..|+. +++ ...+..+...+..+++++ +++++++...++.|..|+.. ++
T Consensus 44 ~~~~egp~~~--~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 44 ATWSEGPAWW--EAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp CSSEEEEEEE--GGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCccCCeEe--CCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CC
Confidence 3445678887 888757778888899999997 444 345555667889999999 77776665566789999985 55
Q ss_pred eEEEeeccCC-CCCceeEEEEecCCCceEEe----eec-------------CCcEEEEeccccccccccceeecCCCCCC
Q 022590 88 CILIFAGAGG-HRNEVLSVDFHPSDIYRIAS----CGM-------------DNTVKIWSMKEFWTYVEKSFTWTDLPSKF 149 (294)
Q Consensus 88 ~~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~----~~~-------------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 149 (294)
.........+ ....+.++++.| ++.++++ |.. .+.|..+|..++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--------------- 181 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--------------- 181 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC---------------
T ss_pred EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE---------------
Confidence 4332221111 123467899999 8887775 332 24566666544210
Q ss_pred CCceeeeceEEeecCCCceeeccee--cceEEEeeCC------CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 150 PTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD------NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
.... .......++|+ ++.|+.+... +.|.+||+..... ...... ..........++
T Consensus 182 ---------~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l----~~~~~~--~~~~~~~pdgi~ 245 (305)
T 3dr2_A 182 ---------QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL----HDRRHF--ASVPDGLPDGFC 245 (305)
T ss_dssp ---------EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE----EEEEEE--ECCSSSCCCSEE
T ss_pred ---------EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc----cCCeEE--EECCCCCCCeEE
Confidence 0111 22334566676 6667666554 7899999864320 000011 111223345688
Q ss_pred EcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCC
Q 022590 222 FSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284 (294)
Q Consensus 222 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 284 (294)
+.+++ + |.++..+ .|.+|+.. ++. ...+.. . ..+.+++|+|+++.|..++.++
T Consensus 246 ~d~~G--~-lwv~~~~-gv~~~~~~-g~~--~~~~~~--~-~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 246 VDRGG--W-LWSSSGT-GVCVFDSD-GQL--LGHIPT--P-GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ECTTS--C-EEECCSS-EEEEECTT-SCE--EEEEEC--S-SCCCEEEECTTSCEEEEEETTE
T ss_pred ECCCC--C-EEEecCC-cEEEECCC-CCE--EEEEEC--C-CceeEEEEeCCCCEEEEEcCCe
Confidence 88888 3 4444444 49999984 332 223321 1 2488999999998888877665
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.53 E-value=7.7e-12 Score=98.20 Aligned_cols=258 Identities=9% Similarity=-0.029 Sum_probs=150.8
Q ss_pred cCCCceEEEEeec-C----CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee----------CCCcEEEEEc
Q 022590 19 NVDGIPFLVAGGI-N----GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS----------KDESVRLWNV 83 (294)
Q Consensus 19 ~~~~~~~l~~~~~-d----g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~ 83 (294)
.++++ .+++... + +.|.++|..+++.+.++..-..+ .++++| +++.|+.+. .++.|.++|.
T Consensus 81 ~~~~~-~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 81 APDAR-RVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCCTT-EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCC-EEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 36676 4444443 3 69999999999999988865556 899999 777776665 4678999999
Q ss_pred CCCceEEEeecc-CC---CCCceeEEEEecCCCceEEeeec--CCcEEEEeccccccccccceeec----CCCCC-CCCc
Q 022590 84 QTGICILIFAGA-GG---HRNEVLSVDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWT----DLPSK-FPTK 152 (294)
Q Consensus 84 ~~~~~~~~~~~~-~~---~~~~v~~l~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~----~~~~~-~~~~ 152 (294)
.+++.+..+... .. .......+.|+| ++++++++.. ++.|.+.|+.+.+.......... ..... +...
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMN 235 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEE
Confidence 999998887631 00 123467899999 7777777763 57899999998544322211000 00000 0000
Q ss_pred eeeeceEEeecCCCcee----------------eccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec--
Q 022590 153 YVQFPVFIASVHSNYVD----------------CNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-- 212 (294)
Q Consensus 153 ~~~~~~~~~~~~~~~i~----------------~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-- 212 (294)
.....+.........+. .+.+. +..++.....+.+.+.|....... .+..+..
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~-------v~~~~~~~~ 308 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT-------FRAPIEALT 308 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE-------ECCCEESSC
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE-------Eeeeeeecc
Confidence 00000000000001110 11122 344444455677777777543210 0011100
Q ss_pred --------CCCCeeEEEEcccCCcceEEEEc--------CCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC-
Q 022590 213 --------PECDIWFIKFSCDFHYNAAAIGN--------REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS- 275 (294)
Q Consensus 213 --------~~~~i~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 275 (294)
.......++++|+++..|++... ..+.|.++|+.+.+.+...... .....++|+|||+
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-----~~P~gia~spDg~~ 383 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-----HEIDSINVSQDAEP 383 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----EEECEEEECCSSSC
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-----CCcCeEEEccCCCE
Confidence 00112236899998632332221 2357999999998744433332 2478899999999
Q ss_pred EEEEec-cCCcEEEEecCC
Q 022590 276 TILSCC-EDGAIWRWDAIP 293 (294)
Q Consensus 276 ~l~s~~-~dg~i~vw~~~~ 293 (294)
++++.. .++.|.|+|+.+
T Consensus 384 ~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 384 LLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEEETTTTEEEEEETTT
T ss_pred EEEEEcCCCCeEEEEECCC
Confidence 888877 589999999875
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=5.5e-12 Score=106.63 Aligned_cols=243 Identities=9% Similarity=0.050 Sum_probs=141.2
Q ss_pred cCceeEEEEEeecCCCceEEEEe-----ecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCC-----
Q 022590 7 KEESFYTVSWACNVDGIPFLVAG-----GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE----- 76 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg----- 76 (294)
|...+..++|+ |||+ +||.+ +....|++||+.+++.+... .+......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~S--pDg~-~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFS--RDGR-ILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL--GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEEC--TTSS-EEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE--TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEEC--CCCC-EEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe--CCCEEEEEEecCccccc
Confidence 44567777776 9999 66633 23357999999998864431 111113578899 455666666653
Q ss_pred --------cEEEEEcCCCce--EEEeeccCC-CCCceeEEEEecCCCceEEee-e---cCCcEEEEecccccccccccee
Q 022590 77 --------SVRLWNVQTGIC--ILIFAGAGG-HRNEVLSVDFHPSDIYRIASC-G---MDNTVKIWSMKEFWTYVEKSFT 141 (294)
Q Consensus 77 --------~i~vwd~~~~~~--~~~~~~~~~-~~~~v~~l~~~~~~~~~l~~~-~---~dg~i~~wd~~~~~~~~~~~~~ 141 (294)
.|.+|++.++.. ...+.. .. |......+.|+| ++.+|+.. + .++.|+++|+.....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~------- 271 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENA------- 271 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTC-------
T ss_pred ccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCC-------
Confidence 399999987653 223321 12 344578899999 66666443 3 235899999876310
Q ss_pred ecCCCCCCCCceeeeceEEeecCCCceee-cceecceEEEee-C---CCeEEEecCCCCCCCCCCCCceeeeeeecCCCC
Q 022590 142 WTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKS-V---DNEIVLWEPKMKEQSPGEGTADILQKYPVPECD 216 (294)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (294)
....+..+...... +...++.|+..+ . .+.|..+|+.++... ....+..+...
T Consensus 272 ---------------~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-------~~~~l~~~~~~ 329 (693)
T 3iuj_A 272 ---------------PLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-------HWRDLIPERQQ 329 (693)
T ss_dssp ---------------CCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-------GCEEEECCCSS
T ss_pred ---------------ceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-------ccEEEecCCCC
Confidence 12222333333332 222355444333 3 367999998865310 12233333444
Q ss_pred eeEEEEcccCCcceEEEEcCCC--eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC----CcEEEEe
Q 022590 217 IWFIKFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED----GAIWRWD 290 (294)
Q Consensus 217 i~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~vw~ 290 (294)
+. .|+++++ .++++...++ .|++|++.... ...+.. .....+..+.++|+++.|+....+ +.++.||
T Consensus 330 ~~--~~s~~g~-~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 330 VL--TVHSGSG-YLFAEYMVDATARVEQFDYEGKR---VREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp CE--EEEEETT-EEEEEEEETTEEEEEEECTTSCE---EEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EE--EEEEECC-EEEEEEEECCeeEEEEEECCCCe---eEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 43 8899885 2334444454 68888887542 222221 223457778888888877665444 7888888
Q ss_pred cCC
Q 022590 291 AIP 293 (294)
Q Consensus 291 ~~~ 293 (294)
+.+
T Consensus 403 ~~~ 405 (693)
T 3iuj_A 403 PKS 405 (693)
T ss_dssp TTT
T ss_pred CCC
Confidence 753
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.51 E-value=2.3e-10 Score=87.82 Aligned_cols=226 Identities=9% Similarity=-0.047 Sum_probs=136.4
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEE
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICIL 90 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 90 (294)
..+.+|+ |++..++++...++.|..||..+++.. .+. ....+.+++|++ +++++++. .+ .|.+||..+++...
T Consensus 51 ~egp~~~--~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 51 GEGPTFD--PASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEEE--TTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEEE
T ss_pred CcCCeEe--CCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEEE
Confidence 4567787 765547778878899999999876542 333 356799999999 77776654 44 49999998877543
Q ss_pred EeeccCCC-CCceeEEEEecCCCceEEeeec------CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 91 IFAGAGGH-RNEVLSVDFHPSDIYRIASCGM------DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 91 ~~~~~~~~-~~~v~~l~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
........ ...+.+++++| ++.++++... .+.|..++ ... ...+..
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~------------------------~~~~~~ 176 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGK------------------------VTKLFA 176 (326)
T ss_dssp EECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTE------------------------EEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCc------------------------EEEeeC
Confidence 32211111 24689999999 7776655432 23444444 211 000111
Q ss_pred CCCceeeccee--cceEE-EeeCCCeEEEecCC--CC-CCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 164 HSNYVDCNRWL--GDFIL-SKSVDNEIVLWEPK--MK-EQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~-~~~~d~~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
+......++|+ ++.++ +.+.++.|.+||+. ++ ... ....+..+......+..+++.+++ .+.++...+
T Consensus 177 ~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~----~~~~~~~~~~~~~~p~gi~~d~~G--~lwva~~~~ 250 (326)
T 2ghs_A 177 DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG----KAEVFIDSTGIKGGMDGSVCDAEG--HIWNARWGE 250 (326)
T ss_dssp EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS----CCEEEEECTTSSSEEEEEEECTTS--CEEEEEETT
T ss_pred CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc----CceEEEECCCCCCCCCeeEECCCC--CEEEEEeCC
Confidence 12234566675 55554 44557899999986 33 210 111222222223446778888888 455555566
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEc-cCCCEEEEec
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCC 281 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~ 281 (294)
+.|..||. +++. ...+. .....+++++|+ |+++.|+.++
T Consensus 251 ~~v~~~d~-~g~~--~~~i~--~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 251 GAVDRYDT-DGNH--IARYE--VPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TEEEEECT-TCCE--EEEEE--CSCSBEEEEEEESTTSCEEEEEE
T ss_pred CEEEEECC-CCCE--EEEEE--CCCCCcEEEEEecCCCCEEEEEe
Confidence 88999998 3432 22332 223468999998 8887665443
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=4.5e-12 Score=108.05 Aligned_cols=234 Identities=11% Similarity=0.044 Sum_probs=135.9
Q ss_pred cCCCceEEEEeecCCe---EEEEE--cC---Ccccccee------cccCcceEEEEeCCCCCceEEEeeCC-----CcEE
Q 022590 19 NVDGIPFLVAGGINGI---IRVID--VS---NEKLHKSF------VGHGDSINEIRTQPLKPSLVVSASKD-----ESVR 79 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~---i~iw~--~~---~~~~~~~~------~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~ 79 (294)
.|+|+ +++....++. -.+|- .. .++....+ .+|...+..++||| ++++|+.+..+ .+|+
T Consensus 115 ~pdG~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGA-SVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASD-DGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETT-EEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECT-TSSEEEEEEEETTCSEEEEE
T ss_pred EEECC-EEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECC-CCCEEEEEEcCCCCceEEEE
Confidence 37898 6665554432 44454 33 33322211 23444788999999 88888776543 4699
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCc--------------EEEEeccccccccccceeecCC
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT--------------VKIWSMKEFWTYVEKSFTWTDL 145 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~--------------i~~wd~~~~~~~~~~~~~~~~~ 145 (294)
+||+.+++.+.... +...+..++|+| + ..|+.++.++. |++|++.+....
T Consensus 193 v~dl~tg~~~~~~~----~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~---------- 256 (741)
T 1yr2_A 193 FVGVADGKPLADEL----KWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA---------- 256 (741)
T ss_dssp EEETTTCCEEEEEE----EEEESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG----------
T ss_pred EEECCCCCCCCccC----CCceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh----------
Confidence 99999998765422 222346789999 6 76777766554 888888653210
Q ss_pred CCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCee
Q 022590 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 218 (294)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 218 (294)
...+.....+...+..+.|+ |++|+..+.+ ..|.+||+.++.. .....+..+.....
T Consensus 257 ---------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 257 ---------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-------GPVTALIPDLKAQW 320 (741)
T ss_dssp ---------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-------CCCEEEECSSSSCE
T ss_pred ---------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-------cccEEecCCCCceE
Confidence 00111222233346677776 7777776654 3899999876411 00223333333344
Q ss_pred EEEEcccCCcceEEEEcC----CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 219 FIKFSCDFHYNAAAIGNR----EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.. ++|+++ .|+..+. ++.|.+||+.+........+. .+...+..++++ ++.++++...|+..+||.+.
T Consensus 321 ~~-~~~dg~--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 321 DF-VDGVGD--QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE-EEEETT--EEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EE-EeccCC--EEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 44 347774 4555443 456999998774201122222 333457778887 56778888899987777543
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.50 E-value=1.6e-11 Score=94.81 Aligned_cols=240 Identities=12% Similarity=-0.030 Sum_probs=149.0
Q ss_pred eecCCCceEEEEeec-----CCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee----------CCCcEEEE
Q 022590 17 ACNVDGIPFLVAGGI-----NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS----------KDESVRLW 81 (294)
Q Consensus 17 ~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vw 81 (294)
.+.|+++ .+++... ++.|.+.|..+++.+.++..-..+ . ++++| +++.++.+. .++.|.+|
T Consensus 39 ~~~pd~~-~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 39 APAPDAR-RVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCTT-EEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCCCCC-EEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEEE
Confidence 3458998 5555544 689999999999999988765555 4 99999 777776664 36789999
Q ss_pred EcCCCceEEEeeccCC----CCCceeEEEEecCCCceEEeeec--CCcEEEEeccccccccccceeecCCCCCCCCceee
Q 022590 82 NVQTGICILIFAGAGG----HRNEVLSVDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 82 d~~~~~~~~~~~~~~~----~~~~v~~l~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
|..+++.+..+....+ .......+.|+| ++++++++.. ++.|.++|+.+.+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~v--------------------- 172 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAF--------------------- 172 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEE---------------------
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcE---------------------
Confidence 9999999888764211 123567899999 7777777653 68999999998432
Q ss_pred eceEEeecCCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCee-EEEEc-ccCCcceEE
Q 022590 156 FPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW-FIKFS-CDFHYNAAA 232 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~-~~~~~~~l~ 232 (294)
+..+... + ...+... ...+++.+.||.+.+.++........ .....+.....++. ...|. +++ .+++
T Consensus 173 --v~tI~v~-g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~----~~~~~~~~~~~~~~~~~~~~~~dG--~~~~ 242 (386)
T 3sjl_D 173 --KRMLDVP-D-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI----THTEVFHPEDEFLINHPAYSQKAG--RLVW 242 (386)
T ss_dssp --EEEEECC-S-EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE----EECCCCSCTTSCBCSCCEEETTTT--EEEE
T ss_pred --EEEEECC-C-cceeecCCCceeEEECCCCCEEEEECCCCCeEEE----eecceeccccccccccceeEcCCC--cEEE
Confidence 2222111 1 0111111 45677888899999999876321100 00000111111121 13453 555 3334
Q ss_pred EEcCCCeEEEEeccCCCceeeeecc--------ccccCCCeEEEEEccCCCEEEEecc----------CCcEEEEecCC
Q 022590 233 IGNREGKIFVWELQSSPPVLIARLS--------HAQSKSPIRQTAMSYDGSTILSCCE----------DGAIWRWDAIP 293 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~ 293 (294)
.+.+|.|++.|+.+........+. ..........++++|+++.|+.... .+.|.+.|+++
T Consensus 243 -vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t 320 (386)
T 3sjl_D 243 -PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 320 (386)
T ss_dssp -EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred -EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC
Confidence 555899999999876533332221 0111233455788999998887643 24688888764
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=2.4e-10 Score=89.12 Aligned_cols=237 Identities=9% Similarity=-0.101 Sum_probs=143.9
Q ss_pred ecCCCceEEEEeec--CC---eEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee----------CCCcEEEEE
Q 022590 18 CNVDGIPFLVAGGI--NG---IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS----------KDESVRLWN 82 (294)
Q Consensus 18 ~~~~~~~~l~~~~~--dg---~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd 82 (294)
+.|+++ ++++... .+ .|.++|..+++.+.++.....+ .++++| +++.++.+. .++.|.+||
T Consensus 28 ~~~~~~-~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGR-RSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCC-EEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEE
Confidence 347776 5655543 33 8899999999988887754444 999999 888777775 367899999
Q ss_pred cCCCceEEEeecc-CC---CCCceeEEEEecCCCceEEeeec--CCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 83 VQTGICILIFAGA-GG---HRNEVLSVDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 83 ~~~~~~~~~~~~~-~~---~~~~v~~l~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
..+.+.+..+... .. +......+.|+| ++++|+++.. ++.|.++| .+.+.
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~---------------------- 159 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSS---------------------- 159 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCE----------------------
Confidence 9998888776531 00 013356899999 8887887764 57899999 77321
Q ss_pred ceEE-eecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeee--eeecCCCC-eeEEEEcccCCcceEE
Q 022590 157 PVFI-ASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ--KYPVPECD-IWFIKFSCDFHYNAAA 232 (294)
Q Consensus 157 ~~~~-~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~-i~~~~~~~~~~~~~l~ 232 (294)
... +. ....+....+....+++.+.||.+.++|. +++... ... .......+ .....+.+++. .+++
T Consensus 160 -~~~~i~-~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~------~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~ 229 (373)
T 2mad_H 160 -DDQLLS-SPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAG------AGLVGAMLTAAQNLLTQPAQANKSG-RIVW 229 (373)
T ss_pred -EeEEcC-CCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEE------EEeccccccCCcceeecceeEecCC-EEEE
Confidence 111 11 11111111122456677778999999999 654210 000 00011111 12245566654 2333
Q ss_pred EEcCCCeEEEEeccCCCceeeeecccc--------ccCCCeEEEEEccCCCEEEEecc----------CCcEEEEecCC
Q 022590 233 IGNREGKIFVWELQSSPPVLIARLSHA--------QSKSPIRQTAMSYDGSTILSCCE----------DGAIWRWDAIP 293 (294)
Q Consensus 233 ~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~s~~~----------dg~i~vw~~~~ 293 (294)
. +..+.+.+.|+..........+... ........++++|+++.|..+.. ++.|.+.|+++
T Consensus 230 ~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 230 P-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred E-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC
Confidence 3 3678999999976543332222110 01123445789999988877643 35799988864
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=1.1e-11 Score=95.91 Aligned_cols=230 Identities=8% Similarity=-0.030 Sum_probs=140.0
Q ss_pred ceeEEEEEeecCCCceEEEEee--cCCeEEEEEcCCcccccee-------cccCcceEEEEeCCCCCceEEEeeC-----
Q 022590 9 ESFYTVSWACNVDGIPFLVAGG--INGIIRVIDVSNEKLHKSF-------VGHGDSINEIRTQPLKPSLVVSASK----- 74 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~l~s~~~----- 74 (294)
.....++++ |+|+ ++++.. .++.++||.+.+++.. .+ ..|-..+..+++++ +++++++-..
T Consensus 17 ~~p~~va~~--~~g~-~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLT--PDGR-LFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEEC--TTSC-EEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTS
T ss_pred CCcceEEEC--CCCC-EEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCC
Confidence 466778876 8998 777753 2343566665555432 22 23456899999999 7776665433
Q ss_pred CCcEEEEEcCCCceEEEeecc---CCCCCceeEEEEecCCCceEEeee---cCCcEEEEeccccccccccceeecCCCCC
Q 022590 75 DESVRLWNVQTGICILIFAGA---GGHRNEVLSVDFHPSDIYRIASCG---MDNTVKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~~l~~~~---~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
++.|.+||+.+++.+..+... ..+...+..++++|.++..+++-. .++.|.+||+.+..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~--------------- 156 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL--------------- 156 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC---------------
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC---------------
Confidence 578999999999877766531 122345789999984556566655 67899999998632
Q ss_pred CCCceeeeceEEeecCCCce---eecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEccc
Q 022590 149 FPTKYVQFPVFIASVHSNYV---DCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 225 (294)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 225 (294)
.......|.... ..+..++..+.+...++.++.|.. .+..++++|+
T Consensus 157 --------~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~-----------------------~~~gia~s~d 205 (343)
T 2qe8_A 157 --------AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL-----------------------GVNGIVLDAE 205 (343)
T ss_dssp --------EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC-----------------------CEEEEEECTT
T ss_pred --------EEEEecCCCcccccccceeECCEEEEeccCCCceeceec-----------------------ccceeEeccC
Confidence 111122221110 112223555555566666654431 2567999999
Q ss_pred CCcceEEEEcCCC-eEEEEeccC---CCc---eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 226 FHYNAAAIGNREG-KIFVWELQS---SPP---VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 226 ~~~~~l~~~~~dg-~i~i~d~~~---~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
+ ..|+.+...+ .+..++... ... .....+...++......++++++|.++++...++.|.+||.
T Consensus 206 g--~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 206 N--EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp S--CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred C--CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 8 4666665554 555555421 110 00000011122345677999999999999999999999997
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.46 E-value=2.6e-10 Score=88.88 Aligned_cols=228 Identities=13% Similarity=0.086 Sum_probs=140.3
Q ss_pred CCCceEEEEeecCCeEEEEEcCCc----cccceec------c-cCcceEEEEeCCCCCceEEEeeCC------CcEEEEE
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNE----KLHKSFV------G-HGDSINEIRTQPLKPSLVVSASKD------ESVRLWN 82 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~------~-h~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd 82 (294)
++++.+++.+..++.|.++|+.+. +..+++. . -...-..+...| ++ +++++..+ |.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 678867777888899999998755 4445442 1 112456678889 77 77776655 7899999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeee-------------------cCCcEEEEeccccccccccceeec
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-------------------MDNTVKIWSMKEFWTYVEKSFTWT 143 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~-------------------~dg~i~~wd~~~~~~~~~~~~~~~ 143 (294)
..+.+.+..+....+...--+.+.|+| +.+.+++.. .+.+|.+||+.+.+.
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--------- 240 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--------- 240 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE---------
T ss_pred CCCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE---------
Confidence 999999988874222223356788999 777777774 368999999987321
Q ss_pred CCCCCCCCceeeeceEEeecC--CCceeecce--e--cceEEEee------CCCeEEEecCCCCCCCCCCCCceeeeee-
Q 022590 144 DLPSKFPTKYVQFPVFIASVH--SNYVDCNRW--L--GDFILSKS------VDNEIVLWEPKMKEQSPGEGTADILQKY- 210 (294)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~--~--~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 210 (294)
...+..- ......+.| + ++++++++ .+++|.+|....+. ....+.+
T Consensus 241 --------------~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-------~~~~~vId 299 (462)
T 2ece_A 241 --------------IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-------WNAEKVIE 299 (462)
T ss_dssp --------------EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-------EEEEEEEE
T ss_pred --------------eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-------eeEEEEEe
Confidence 1111110 011122222 3 56655555 45677776654321 1111111
Q ss_pred -ec----------------CCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCC-Cceeeeecccccc-----------
Q 022590 211 -PV----------------PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS-PPVLIARLSHAQS----------- 261 (294)
Q Consensus 211 -~~----------------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~----------- 261 (294)
.. .......+.++++++ .+.++.-..+.|.+||+... +......+...+.
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr-fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK-FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC-EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCC-EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 00 023467799999996 23344455789999998633 3334444332111
Q ss_pred -CCCeEEEEEccCCCEEEEec
Q 022590 262 -KSPIRQTAMSYDGSTILSCC 281 (294)
Q Consensus 262 -~~~v~~~~~s~~~~~l~s~~ 281 (294)
.+.-..++++|||++|+++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 01357899999999999988
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.45 E-value=7.6e-11 Score=91.11 Aligned_cols=240 Identities=8% Similarity=-0.112 Sum_probs=140.6
Q ss_pred EEEEeecCC----eEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEee----------CCCcEEEEEcCCCceEE
Q 022590 25 FLVAGGING----IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS----------KDESVRLWNVQTGICIL 90 (294)
Q Consensus 25 ~l~~~~~dg----~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~ 90 (294)
..++...++ .|.++|..+++.+.++..-..+ .+.++| ++++++.+. .+++|.+||+.+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 455555455 8899999999999999766666 799999 777777765 47899999999999999
Q ss_pred EeeccCCC----CCceeEEEEecCCCceEEeeec--CCcEEE--EeccccccccccceeecCCCCCCCCceeee------
Q 022590 91 IFAGAGGH----RNEVLSVDFHPSDIYRIASCGM--DNTVKI--WSMKEFWTYVEKSFTWTDLPSKFPTKYVQF------ 156 (294)
Q Consensus 91 ~~~~~~~~----~~~v~~l~~~~~~~~~l~~~~~--dg~i~~--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 156 (294)
.+....+. ......+.++| ++++++++.. +..+.+ +|+.+. . .+..... ........
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~tv-~----~i~v~~~---~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASDD-Q----LTKSASC---FHIHPGAAATHYLG 181 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEEE-E----EEECSSC---CCCEEEETTEEECC
T ss_pred EEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhhc-e----EEECCCc---eEEccCCCeEEEEE
Confidence 88642000 13467899999 7777777764 457888 888761 1 1100000 00000000
Q ss_pred ------ceEEee------------------cCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec
Q 022590 157 ------PVFIAS------------------VHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV 212 (294)
Q Consensus 157 ------~~~~~~------------------~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 212 (294)
...... ....+. . ...+..++..+. +.+.+.|+..... ..+..+..
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~-------~v~~~~~~ 251 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGA-------TMKAAIDG 251 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCC-------EEECCCCS
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcc-------eEEEEEEe
Confidence 000000 000111 1 112333444444 7788888754321 01111111
Q ss_pred C----------CCCeeEEEEcccCCcceEEEE-c---C-----CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccC
Q 022590 213 P----------ECDIWFIKFSCDFHYNAAAIG-N---R-----EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 273 (294)
Q Consensus 213 ~----------~~~i~~~~~~~~~~~~~l~~~-~---~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 273 (294)
. ......+.++|+++ .++++ . . ++.+.++|+.+.+.+ .++... .....++|+||
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s~dg~--~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--~~i~vg---~~p~gi~~s~D 324 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKLKNTD--GIMILTVEHSRSCLAAAENTSSVTASVGQTS--GPISNG---HDSDAIIAAQD 324 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTT--EEEEEEEECSSCTTSCEEEEEEEESSSCCEE--ECCEEE---EEECEEEECCS
T ss_pred ccccccccccccCcceeeEEcCCCC--EEEEEeccccCcccccCCCEEEEECCCCeEE--EEEECC---CCcceEEECCC
Confidence 0 01112267999986 34432 2 2 235669999998743 333321 24788999999
Q ss_pred CCE-EEEec-cCCcEEEEecCC
Q 022590 274 GST-ILSCC-EDGAIWRWDAIP 293 (294)
Q Consensus 274 ~~~-l~s~~-~dg~i~vw~~~~ 293 (294)
|++ +++.. .++.|.++|+++
T Consensus 325 g~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp SSCEEEEEETTTTEEEEEESSS
T ss_pred CCEEEEEccCCCCeEEEEECCC
Confidence 984 55555 589999999875
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=1.3e-10 Score=88.69 Aligned_cols=201 Identities=10% Similarity=0.022 Sum_probs=126.5
Q ss_pred CceeEEEEEeecCC-CceEEEEeecCCeEEEEEcCCccccce-ecc----cCcceEEEEeCCCCCceEEEeeCC------
Q 022590 8 EESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKS-FVG----HGDSINEIRTQPLKPSLVVSASKD------ 75 (294)
Q Consensus 8 ~~~v~~~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~----h~~~v~~~~~~~~~~~~l~s~~~d------ 75 (294)
...+.++++. ++ |+ ++++. ..+.|.+||.+ ++.... ... ....+.++++.+ +++++++...+
T Consensus 70 ~~~~~~i~~~--~~~g~-l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 70 GGIPAGCQCD--RDANQ-LFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPAD 143 (314)
T ss_dssp ECCEEEEEEC--SSSSE-EEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSC
T ss_pred CCCCceEEEe--cCCCc-EEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCccccccc
Confidence 3557777776 88 75 44444 44579999987 654332 211 224588999999 77777776654
Q ss_pred ---------CcEEEEEcCCCceEEEeeccCCCCCceeEEEEe----cCCCce-EEeeecCCcEEEEeccc-cccccccce
Q 022590 76 ---------ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH----PSDIYR-IASCGMDNTVKIWSMKE-FWTYVEKSF 140 (294)
Q Consensus 76 ---------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~ 140 (294)
+.|..++.. ++...... +......++|+ | ++.. +++...++.|.+||+.. .....
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~----~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~---- 213 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDT----AFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIEN---- 213 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEE----EESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEE----
T ss_pred ccccccCCCCeEEEECCC-CCEEEecc----CCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCcccc----
Confidence 567777765 55433332 33456889999 8 6654 45556678999999762 11000
Q ss_pred eecCCCCCCCCceeeeceEEeecCC-Cceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCe
Q 022590 141 TWTDLPSKFPTKYVQFPVFIASVHS-NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 217 (294)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i 217 (294)
......+..+. .....++++ ++++++...++.|.+||..+++ .+..+..+...+
T Consensus 214 --------------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~---------~~~~~~~~~~~~ 270 (314)
T 1pjx_A 214 --------------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ---------PKMRIRCPFEKP 270 (314)
T ss_dssp --------------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS---------CSEEEECSSSCE
T ss_pred --------------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc---------EeEEEeCCCCCc
Confidence 00111222222 445666665 6677776778999999987554 233344455678
Q ss_pred eEEEEcccCCcceEEEEcCCCeEEEEeccCC
Q 022590 218 WFIKFSCDFHYNAAAIGNREGKIFVWELQSS 248 (294)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 248 (294)
.++++++++. .++++...++.|..|++...
T Consensus 271 ~~i~~~~dg~-~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 271 SNLHFKPQTK-TIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEECSSC
T ss_pred eeEEECCCCC-EEEEEeCCCCeEEEEeCCCC
Confidence 8999999883 24555566789999998753
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=7e-10 Score=87.69 Aligned_cols=203 Identities=10% Similarity=0.054 Sum_probs=128.4
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC--cEEEEeccc
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--TVKIWSMKE 131 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg--~i~~wd~~~ 131 (294)
.....|+|++ +++++++...++.|++||..++....... ...... ++|+| ++..|+++..++ .|.+++...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~----~~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHP----GFKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEE----TCCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeec----cCCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCC
Confidence 3578999999 78888887778999999998777665544 223334 99999 777777777665 688888765
Q ss_pred cccccccceeecCCCCCCCCceeeeceEEeec-CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeee
Q 022590 132 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ 208 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 208 (294)
.... ........ ....+.+++++ +..|+.+..++.|+.||...+.. ..+.
T Consensus 204 ~~~~--------------------~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-------~~~~ 256 (409)
T 3hrp_A 204 GWAP--------------------TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-------TLIK 256 (409)
T ss_dssp TTCE--------------------EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-------EEEE
T ss_pred Ccee--------------------EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-------EEEe
Confidence 2110 00001111 33455667775 34555567788999999876531 1111
Q ss_pred e--eecCCCC-ee-EEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc-cc---------ccCCCeEEEEEccCC
Q 022590 209 K--YPVPECD-IW-FIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-HA---------QSKSPIRQTAMSYDG 274 (294)
Q Consensus 209 ~--~~~~~~~-i~-~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~---------~~~~~v~~~~~s~~~ 274 (294)
. ....... .. .++|+|++. .++++-...+.|+.|+..... ....-.. .. ..-.....++++|+|
T Consensus 257 ~~~~~g~~~~~P~~~ia~~p~~g-~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 257 QLELSGSLGTNPGPYLIYYFVDS-NFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp ECCCCSCCCCSSCCEEEEETTTT-EEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred cccccCCCCCCccccEEEeCCCC-EEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 0 1111111 12 899999643 566677778999999976541 1111000 00 012347899999999
Q ss_pred CEEEEec-cCCcEEEEecC
Q 022590 275 STILSCC-EDGAIWRWDAI 292 (294)
Q Consensus 275 ~~l~s~~-~dg~i~vw~~~ 292 (294)
+++++-. .++.|+.|++.
T Consensus 335 ~lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp CEEEEETTTTCEEEEEETT
T ss_pred CEEEEeCCCCCEEEEEECC
Confidence 9888887 88999999853
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.41 E-value=3.2e-13 Score=105.37 Aligned_cols=205 Identities=10% Similarity=0.010 Sum_probs=113.6
Q ss_pred CCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCC
Q 022590 21 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRN 100 (294)
Q Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 100 (294)
++. .+++++.||.|+.||..+|+.+..+.. +.+.+..+.. ++..+++++.||.|..||..+|+.+..+.. +..
T Consensus 8 ~~~-~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~---~~~ 80 (369)
T 2hz6_A 8 PET-LLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPF---TIP 80 (369)
T ss_dssp CTT-EEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSC---CHH
T ss_pred eCC-EEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeec---cCc
Confidence 455 799999999999999999999888775 5565555666 667888888999999999999987766541 211
Q ss_pred -cee-EEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceE
Q 022590 101 -EVL-SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 178 (294)
Q Consensus 101 -~v~-~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 178 (294)
.+. +..+. .+..+++++.|+.++.||.++++..... ..+.. + ..+..++.+
T Consensus 81 ~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~-----------------------~~~~~-~-~~~p~~~~v 133 (369)
T 2hz6_A 81 ELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTL-----------------------SSAFA-D-SLSPSTSLL 133 (369)
T ss_dssp HHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------------------------------E
T ss_pred cccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEe-----------------------cCCCc-c-cccccCCEE
Confidence 110 01111 2346788889999999999985432211 11100 0 011147788
Q ss_pred EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccC-CcceEEEEcCCCeEEEEeccCCCceeeeecc
Q 022590 179 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDF-HYNAAAIGNREGKIFVWELQSSPPVLIARLS 257 (294)
Q Consensus 179 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 257 (294)
++++.++.|+.||.++++.... .. ... .....+..+. ....+++++.+|.++.||.++++......+.
T Consensus 134 ~~~~~dg~v~a~d~~tG~~~W~-----~~--~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 134 YLGRTEYTITMYDTKTRELRWN-----AT--YFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp EEEEEEEEEECCCSSSSSCCCE-----EE--EEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred EEEecCCEEEEEECCCCCEEEe-----Ee--ccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 8899999999999998864221 10 000 0111222221 0025777888999999999998755444322
Q ss_pred ccccCCCeE-EEEEccCCC
Q 022590 258 HAQSKSPIR-QTAMSYDGS 275 (294)
Q Consensus 258 ~~~~~~~v~-~~~~s~~~~ 275 (294)
.++. ...++++|.
T Consensus 203 -----~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 203 -----SPVVAFYVWQREGL 216 (369)
T ss_dssp -----SCEEEEEECTTSSC
T ss_pred -----CceEEEEEecCCce
Confidence 3443 344555654
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=4.8e-10 Score=84.89 Aligned_cols=182 Identities=9% Similarity=0.053 Sum_probs=116.1
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc----cCcceEEEEeCCCCCceEEEeeCC--------
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG----HGDSINEIRTQPLKPSLVVSASKD-------- 75 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~~d-------- 75 (294)
...+.++++. ++|+ ++++. ++.|.+||.++++....... ....++.++++| +++++++...+
T Consensus 53 ~~~~~~i~~~--~dG~-l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 53 DAPVSSVALR--QSGG-YVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp SSCEEEEEEB--TTSS-EEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCC
T ss_pred CCceEEEEEC--CCCC-EEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCccccccccc
Confidence 4567788876 9998 55543 56899999987764332221 224588999999 77766654322
Q ss_pred -CcEEEEEcCC-CceEEEeeccCCCCCceeEEEEecCCCc-eEEeeecCCcEEEEecc--ccccccccceeecCCCCCCC
Q 022590 76 -ESVRLWNVQT-GICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSKFP 150 (294)
Q Consensus 76 -g~i~vwd~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~-~l~~~~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~~~~ 150 (294)
..-.+|.+.. ++...... .....+.++|+| +++ ++++.+.++.|.+|++. ++...
T Consensus 127 ~~~~~l~~~d~~g~~~~~~~----~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~--------------- 186 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKKYFD----QVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQIS--------------- 186 (297)
T ss_dssp TTCEEEEEECTTSCEEEEEE----EESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEE---------------
T ss_pred CCCcEEEEEECCCCEEEEee----ccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCccc---------------
Confidence 3345666543 33333222 344578999999 665 45666678899999974 21100
Q ss_pred CceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEc-ccCC
Q 022590 151 TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS-CDFH 227 (294)
Q Consensus 151 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 227 (294)
.......+..+......++++ |++.++....+.|..||..+++ .+..+..+...+++++|. |+++
T Consensus 187 ---~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~---------~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 187 ---NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK---------RLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp ---EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC---------EEEEEECSSSBEEEEEEESGGGC
T ss_pred ---CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce---------EEEEEECCCCCceEEEEeCCCCC
Confidence 011122222233455667775 7777776778899999998665 566677776789999998 7875
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=8.5e-13 Score=102.97 Aligned_cols=179 Identities=12% Similarity=0.029 Sum_probs=99.5
Q ss_pred CCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecC
Q 022590 65 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 144 (294)
Q Consensus 65 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 144 (294)
++..+++++.||.|..||..+|+.+..+.. +.+.+..+.. ++..+++++.||.|+.||..+++....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~------- 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTK------- 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC------CCEEECTTTCCEEEC-----CCSEE-------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeee-------
Confidence 456889999999999999999999988872 4455555555 666788888999999999977432111
Q ss_pred CCCCCCCceeeeceEEeecCC-Cce-eecce-ecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEE
Q 022590 145 LPSKFPTKYVQFPVFIASVHS-NYV-DCNRW-LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 221 (294)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~-~~i-~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (294)
...+. ..+ ..... .++.+++++.++.++.||.++++... .+..+. ...
T Consensus 75 ----------------~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w---------~~~~~~----~~~ 125 (369)
T 2hz6_A 75 ----------------LPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQ---------TLSSAF----ADS 125 (369)
T ss_dssp ----------------CSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------
T ss_pred ----------------eeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEE---------EecCCC----ccc
Confidence 11110 000 01111 35678888899999999999887422 222111 123
Q ss_pred EcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC---CEEEEeccCCcEEEEecCC
Q 022590 222 FSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG---STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 222 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~dg~i~vw~~~~ 293 (294)
++|++ ..+++++.++.|+.||.++++........ . ....+++++. ..+++++.||.|+.||.++
T Consensus 126 ~~p~~--~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 126 LSPST--SLLYLGRTEYTITMYDTKTRELRWNATYF--D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEE--E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred ccccC--CEEEEEecCCEEEEEECCCCCEEEeEecc--c----ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 45554 57888899999999999998755444322 1 1222333332 4577788899999999764
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.34 E-value=2.3e-09 Score=78.54 Aligned_cols=208 Identities=10% Similarity=-0.032 Sum_probs=133.7
Q ss_pred cccceecccCc--ceEEEEeCCCCCceEEEeeC--CCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeee
Q 022590 44 KLHKSFVGHGD--SINEIRTQPLKPSLVVSASK--DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 44 ~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
+.+.++. |.. ....+.|++ ++.++++.+. ++.|+++|+.+++.+..+.. +.......+++. ++.+.++.-
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEE--TTEEEEEET
T ss_pred eEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEe--CCEEEEEEe
Confidence 3445554 443 357899998 6666665553 68999999999999888763 111223356665 456666667
Q ss_pred cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCC
Q 022590 120 MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSP 199 (294)
Q Consensus 120 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 199 (294)
.++.+.++|..+.+. +..+......-..+++++..++++..++.|.++|..+.+
T Consensus 84 ~~~~v~viD~~t~~v-----------------------~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~--- 137 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSN-----------------------IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFK--- 137 (266)
T ss_dssp TCSEEEEEETTTTEE-----------------------EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCC---
T ss_pred cCCEEEEEECCCCcE-----------------------EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCc---
Confidence 789999999987422 222221111123466677777777778999999998765
Q ss_pred CCCCceeeeeeecC-----CCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecccc---------ccCCCe
Q 022590 200 GEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA---------QSKSPI 265 (294)
Q Consensus 200 ~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~~~~~v 265 (294)
....+... -..++.+.+. ++ ...+....++.|.+.|..+++......+... ......
T Consensus 138 ------v~~~I~Vg~~~~p~~~~nele~~-dg--~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~ 208 (266)
T 2iwa_A 138 ------LIKKHNVKYNGHRVIRLNELEYI-NG--EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVL 208 (266)
T ss_dssp ------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCE
T ss_pred ------EEEEEEECCCCcccccceeEEEE-CC--EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCce
Confidence 33333321 1236677777 55 4555565688999999999985444443210 011356
Q ss_pred EEEEEccCCCE-EEEeccCCcEEEEecC
Q 022590 266 RQTAMSYDGST-ILSCCEDGAIWRWDAI 292 (294)
Q Consensus 266 ~~~~~s~~~~~-l~s~~~dg~i~vw~~~ 292 (294)
+.++|+|+++. ++++...+.+.+-++.
T Consensus 209 nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 209 NGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 89999999865 5566677888887764
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=1.7e-10 Score=89.23 Aligned_cols=228 Identities=13% Similarity=0.058 Sum_probs=137.7
Q ss_pred cCceeEEEEEeecCCCceEEEEeec-----CCeEEEEEcCCccccceecc------cCcceEEEEeCCCCCceEEEee--
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGI-----NGIIRVIDVSNEKLHKSFVG------HGDSINEIRTQPLKPSLVVSAS-- 73 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~l~s~~-- 73 (294)
|-..+..+++. ++|+ ++++... ++.|.+||+.+++.+..+.. +...+..+++++.++..+++-.
T Consensus 65 ~~~~p~gv~~d--~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 65 TFDTVLGIKSD--GNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCSCEEEEEEC--SSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred ceeEeeEEEEc--CCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence 45678888886 8887 5555443 57999999998887665543 2235689999984455556655
Q ss_pred -CCCcEEEEEcCCCceEEEeeccCCCCCcee-EEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCC
Q 022590 74 -KDESVRLWNVQTGICILIFAGAGGHRNEVL-SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 151 (294)
Q Consensus 74 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
.++.|.+||+.+++....+. +|..... ...+.+ ++..+.+.+.++.++.|...
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~~~--------------------- 196 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQ---GYPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPHLG--------------------- 196 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECT---TCTTTSCCSCCCEE-TTEECBEECTTSCEECCCCC---------------------
T ss_pred CCCCeEEEEECCCCCEEEEec---CCCcccccccceeE-CCEEEEeccCCCceeceecc---------------------
Confidence 67899999999888766554 3322110 134445 56666666777776555321
Q ss_pred ceeeeceEEeecCCCceeeccee--cceEEEeeCCC-eEEEecCCCCCCCCCCCCce---eeeeeecCCCCeeEEEEccc
Q 022590 152 KYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN-EIVLWEPKMKEQSPGEGTAD---ILQKYPVPECDIWFIKFSCD 225 (294)
Q Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~ 225 (294)
+..++++ ++.|+.+..++ .+..++......... .... .+... .+......++++++
T Consensus 197 ----------------~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~-g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 197 ----------------VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL-TDAELGSKIERY-SEKPICDGISIDKD 258 (343)
T ss_dssp ----------------EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC-CHHHHHTTCEEE-EECCSCSCEEECTT
T ss_pred ----------------cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC-ChhhhhcceEec-ccCCCCceEEECCC
Confidence 2234444 66676666555 455444321110000 0000 00111 11224556899998
Q ss_pred CCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCc
Q 022590 226 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 285 (294)
Q Consensus 226 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 285 (294)
+ .++++...++.|.+||..+++....... .......+++|.++++++++.+..+.
T Consensus 259 G--~l~va~~~~~~V~~~d~~~G~~~~~~~~---~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 259 H--NIYVGDLAHSAIGVITSADRAYKLLVTD---EKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp C--CEEEEEGGGTEEEEEETTTTEEEEEEEC---GGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred C--CEEEEccCCCeEEEEECCCCCEEEEEEC---CceecCCeeEECCCCcEEEEeCcccc
Confidence 7 6888888899999999855532222211 22356899999999998888765443
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.30 E-value=2.8e-09 Score=81.81 Aligned_cols=214 Identities=10% Similarity=0.011 Sum_probs=138.0
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeE
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 104 (294)
.+..++.++.|..+|.. ++.......+...+.++...+ ++. +..++.++.|..+|.. ++....+.. ....+.+
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~---~~~~~~~ 181 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKT---NDAITSA 181 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEec---CCCceee
Confidence 57788888999999987 776666655555667777766 554 6667778999999998 777766652 4456777
Q ss_pred EEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceec-ceEEEeeC
Q 022590 105 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG-DFILSKSV 183 (294)
Q Consensus 105 l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~ 183 (294)
+...+ ++.++ .++ +.+..+| .++. ...........+.++..++ ..+..++.
T Consensus 182 ~~~d~-~g~l~-v~t--~~l~~~d-~~g~-----------------------~~~~~~~~~~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 182 ASIGK-DGTIY-FGS--DKVYAIN-PDGT-----------------------EKWNFYAGYWTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp CEECT-TCCEE-EES--SSEEEEC-TTSC-----------------------EEEEECCSSCCCSCCEECTTSCEEEEET
T ss_pred eEEcC-CCEEE-EEe--CEEEEEC-CCCc-----------------------EEEEEccCCcceeceEECCCCeEEEEcC
Confidence 77766 66544 444 7889998 4421 1222222334566666663 37777888
Q ss_pred CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCC
Q 022590 184 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 263 (294)
Q Consensus 184 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 263 (294)
++.+..+|.. ++ .+..+......+..+.+.+++ .|..++.+|.|..+|. +++....... ...
T Consensus 234 ~~gl~~~~~~-g~---------~~~~~~~~~~~~~~~~~~~~g---~l~v~t~~ggl~~~d~-~g~~~~~~~~----~~~ 295 (330)
T 3hxj_A 234 DGHLYAINPD-GT---------EKWRFKTGKRIESSPVIGNTD---TIYFGSYDGHLYAINP-DGTEKWNFET----GSW 295 (330)
T ss_dssp TTEEEEECTT-SC---------EEEEEECSSCCCSCCEECTTS---CEEEECTTCEEEEECT-TSCEEEEEEC----SSC
T ss_pred CCeEEEECCC-CC---------EeEEeeCCCCccccceEcCCC---eEEEecCCCCEEEECC-CCcEEEEEEc----CCc
Confidence 8888888753 22 233333333333344555454 5777888889999996 4543333222 234
Q ss_pred CeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 264 PIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 264 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.+.++...++|+ |..++.+|.+++...+
T Consensus 296 ~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 296 IIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp CCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred cccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 567778878876 5557889999987764
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=9.6e-10 Score=92.42 Aligned_cols=245 Identities=12% Similarity=0.106 Sum_probs=142.0
Q ss_pred EEEEeecCCeEEEEEcCCccccceeccc-C----cceEE-EEeCCCCCceEEEeeC------CCcEEEEEcCCCceEEEe
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGH-G----DSINE-IRTQPLKPSLVVSASK------DESVRLWNVQTGICILIF 92 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h-~----~~v~~-~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~ 92 (294)
.|++++.|+.|..+|..+|+.+..+..+ . ..+.+ .... ++ .++.++. +|.|..+|..+|+.+..+
T Consensus 130 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF--KG-KVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE--CC-EEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 6888899999999999999988777654 1 11211 1111 33 4444443 799999999999998877
Q ss_pred eccCCCC-----------------------------CceeEEEEecCCCceEEeeecCC-------------------cE
Q 022590 93 AGAGGHR-----------------------------NEVLSVDFHPSDIYRIASCGMDN-------------------TV 124 (294)
Q Consensus 93 ~~~~~~~-----------------------------~~v~~l~~~~~~~~~l~~~~~dg-------------------~i 124 (294)
....... .....++++| +..+++.+..++ .|
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 6421110 0113578888 666677766554 48
Q ss_pred EEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce-eecceec---ceEEEeeCCCeEEEecCCCCCCCCC
Q 022590 125 KIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV-DCNRWLG---DFILSKSVDNEIVLWEPKMKEQSPG 200 (294)
Q Consensus 125 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~ 200 (294)
..+|.++++..-........ ... ......++ .....+| ..++.++.+|.++++|.++++....
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d---~wd----------~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGD---NWD----------YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp EEECTTTCCEEEEEESSTTC---CSC----------CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEEEEecCCCc---ccc----------cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 88888874432211100000 000 00000111 1111124 6889999999999999998874211
Q ss_pred CCCc--eeeeeeecCC------------------------CCeeEEEEcccCCcceEEEEcC------------------
Q 022590 201 EGTA--DILQKYPVPE------------------------CDIWFIKFSCDFHYNAAAIGNR------------------ 236 (294)
Q Consensus 201 ~~~~--~~~~~~~~~~------------------------~~i~~~~~~~~~~~~~l~~~~~------------------ 236 (294)
.... .....+.... ..-..++++|+.. ++++...
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~--~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG--LVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT--EEEEEEEECCCEEEECTTCCTTCCC
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC--EEEEeChhcceeeeccccccccccc
Confidence 0000 0000000000 0012467777763 5544322
Q ss_pred -------------------------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 237 -------------------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 237 -------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
.|.|..||+.+++.+...... .++....+..++.+++.++.||.+++||.
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-----~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-----SPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-----CCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 278999999998755444332 33445556778889999999999999998
Q ss_pred CC
Q 022590 292 IP 293 (294)
Q Consensus 292 ~~ 293 (294)
++
T Consensus 506 ~t 507 (677)
T 1kb0_A 506 AT 507 (677)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.29 E-value=8.9e-09 Score=80.65 Aligned_cols=225 Identities=8% Similarity=-0.001 Sum_probs=133.6
Q ss_pred EEEEeecCCeEEEEEcCCccccceeccc---------CcceE-EEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeec
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGH---------GDSIN-EIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 94 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h---------~~~v~-~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 94 (294)
.+++++.++.|..+|..+++.+..+... ...+. .... .+..++.++.++.|..+|..+++.+.....
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 6888888999999999999887665532 12232 2333 335677788899999999999998877663
Q ss_pred cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee
Q 022590 95 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL 174 (294)
Q Consensus 95 ~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 174 (294)
........... + ..+++++.++.+..+|..+++........ .+...... .......
T Consensus 132 ---~~~~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~--------------~~~~~~~~----~~~~~~~ 187 (376)
T 3q7m_A 132 ---AGEALSRPVVS--D-GLVLIHTSNGQLQALNEADGAVKWTVNLD--------------MPSLSLRG----ESAPTTA 187 (376)
T ss_dssp ---SSCCCSCCEEE--T-TEEEEECTTSEEEEEETTTCCEEEEEECC--------------C-----CC----CCCCEEE
T ss_pred ---CCceEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcEEEEEeCC--------------CCceeecC----CCCcEEE
Confidence 21111122222 3 35777888999999999875322111100 00000000 0122223
Q ss_pred cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC-------CeeEEEEcccCCcceEEEEcCCCeEEEEeccC
Q 022590 175 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC-------DIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 247 (294)
Q Consensus 175 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 247 (294)
+..++.+..++.+..+|..+++. +-....... .+..+...|--....++.++.++.+..+|..+
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~---------~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQM---------IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCE---------EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred CCEEEEEcCCCEEEEEECCCCcE---------EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence 66788888899999999987763 222221100 00000011100013677788899999999999
Q ss_pred CCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 248 SPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
++....... .....+.. ++..|+.++.+|.|..+|.++
T Consensus 259 G~~~w~~~~------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 259 GQIMWKREL------GSVNDFIV--DGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp CCEEEEECC------CCEEEEEE--ETTEEEEEETTCCEEEEETTT
T ss_pred CcEEeeccC------CCCCCceE--ECCEEEEEcCCCeEEEEECCC
Confidence 875443332 12334443 356777788888899988764
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.28 E-value=7.8e-10 Score=93.58 Aligned_cols=202 Identities=8% Similarity=0.012 Sum_probs=119.3
Q ss_pred ccCcceEEEEeCCCCCceEEE-----eeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC---
Q 022590 51 GHGDSINEIRTQPLKPSLVVS-----ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--- 122 (294)
Q Consensus 51 ~h~~~v~~~~~~~~~~~~l~s-----~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg--- 122 (294)
+|...+..++||| ++++||- |+...+|++||+.+++.+.... +......++|+ +++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~----~~~k~~~~~Ws--Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL----KDVKFSGISWL--GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----EEEESCCCEEE--TTTEEEEEESSCCC-
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----CCceeccEEEe--CCCEEEEEEecCccc
Confidence 3556788999999 8887773 3334679999999998654321 11123567898 445566666553
Q ss_pred ----------cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec-CCCceeeccee--cceEEEee----CCC
Q 022590 123 ----------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKS----VDN 185 (294)
Q Consensus 123 ----------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~----~d~ 185 (294)
.|++|++.+.... ...+..... |......+.|+ +++|+... ...
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~-------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQED-------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp ------CCCCEEEEEETTSCGGG-------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred ccccccCCCcEEEEEECCCCccc-------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 3888988763211 011222222 34445566665 66664433 235
Q ss_pred eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC---CCeEEEEeccCCCceeeeeccccccC
Q 022590 186 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR---EGKIFVWELQSSPPVLIARLSHAQSK 262 (294)
Q Consensus 186 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~ 262 (294)
.|.++|+.++.. ....+..+....... ++++++ .+++.... .+.|..+|+.+.+......+. .+.
T Consensus 260 ~i~~~d~~~~~~--------~~~~l~~~~~~~~~~-~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~ 327 (693)
T 3iuj_A 260 RLYVKDLSQENA--------PLLTVQGDLDADVSL-VDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PER 327 (693)
T ss_dssp EEEEEETTSTTC--------CCEEEECSSSSCEEE-EEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCC
T ss_pred EEEEEECCCCCC--------ceEEEeCCCCceEEE-EeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCC
Confidence 899999976532 123333344444443 667765 34444443 368999999886541112222 233
Q ss_pred CCeEEEEEccCCCEEEEeccC-C--cEEEEecC
Q 022590 263 SPIRQTAMSYDGSTILSCCED-G--AIWRWDAI 292 (294)
Q Consensus 263 ~~v~~~~~s~~~~~l~s~~~d-g--~i~vw~~~ 292 (294)
..+. .|++++++|+....+ | .|++|++.
T Consensus 328 ~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 328 QQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred CCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 3344 899999988876554 4 58888875
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.28 E-value=1.7e-08 Score=79.12 Aligned_cols=227 Identities=7% Similarity=0.009 Sum_probs=135.0
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCce--
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEV-- 102 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v-- 102 (294)
.+++++.++.|..+|..+++.................. +..++.++.++.|..+|..+++.+..+.. ..++
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~----~~~~~~ 177 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNL----DMPSLS 177 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEEC----CC----
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeC----CCCcee
Confidence 68888899999999999998876665433222222222 34677788899999999999998887763 2222
Q ss_pred ----eEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceE
Q 022590 103 ----LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 178 (294)
Q Consensus 103 ----~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 178 (294)
...... + ..++.+..++.+..+|..++............. ......+. .........+..+
T Consensus 178 ~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~~---~~~~~p~~~~~~v 242 (376)
T 3q7m_A 178 LRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG---------STEIDRLS---DVDTTPVVVNGVV 242 (376)
T ss_dssp -CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------------------CCCCCCEEETTEE
T ss_pred ecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCCC---------Cccccccc---ccCCCcEEECCEE
Confidence 122222 3 357778889999999998754322111100000 00000000 0001111236778
Q ss_pred EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc
Q 022590 179 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH 258 (294)
Q Consensus 179 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 258 (294)
+.++.++.+..+|.++++. +..... .....+.. ++ ..++.++.++.+..+|..+++........
T Consensus 243 ~~~~~~g~l~~~d~~tG~~---------~w~~~~--~~~~~~~~--~~--~~l~~~~~~g~l~~~d~~tG~~~w~~~~~- 306 (376)
T 3q7m_A 243 FALAYNGNLTALDLRSGQI---------MWKREL--GSVNDFIV--DG--NRIYLVDQNDRVMALTIDGGVTLWTQSDL- 306 (376)
T ss_dssp EEECTTSCEEEEETTTCCE---------EEEECC--CCEEEEEE--ET--TEEEEEETTCCEEEEETTTCCEEEEECTT-
T ss_pred EEEecCcEEEEEECCCCcE---------EeeccC--CCCCCceE--EC--CEEEEEcCCCeEEEEECCCCcEEEeeccc-
Confidence 8888899999999987752 222221 22333333 23 46777888999999999998754443311
Q ss_pred cccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 259 AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 259 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
. ...+..... .+..|+.++.+|.|+++|.++
T Consensus 307 -~-~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 307 -L-HRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp -T-TSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred -C-CCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 1 111222222 246788888999999999764
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.28 E-value=4e-09 Score=80.11 Aligned_cols=204 Identities=9% Similarity=-0.065 Sum_probs=122.8
Q ss_pred ccceecccCcceEEEEeCCCCCc-eEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCc
Q 022590 45 LHKSFVGHGDSINEIRTQPLKPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 123 (294)
Q Consensus 45 ~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~ 123 (294)
.+..+...........|+| +++ ++++...++.|..|+. +++. ..+. .+...+..+++++ +++++++...++.
T Consensus 36 ~~~~l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~---~~~~~~~gl~~d~-dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGTV-DVLL---DATAFTNGNAVDA-QQRLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSCE-EEEE---ESCSCEEEEEECT-TSCEEEEETTTTE
T ss_pred ceEEEecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCCE-EEEe---CCCCccceeeECC-CCCEEEEECCCCE
Confidence 3444544556678899999 655 7788888899999998 4553 3444 2566789999999 7786666556678
Q ss_pred EEEEeccccccccccceeecCCCCCCCCceeeeceEEeec-CCCceeeccee--cceEEE----eeC-------------
Q 022590 124 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILS----KSV------------- 183 (294)
Q Consensus 124 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~----~~~------------- 183 (294)
|.+|+... .... ....... ....+..+.++ |++.++ |..
T Consensus 109 v~~~~~~g-~~~~--------------------~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~ 167 (305)
T 3dr2_A 109 ITRSDADG-QAHL--------------------LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELA 167 (305)
T ss_dssp EEEECTTS-CEEE--------------------EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSS
T ss_pred EEEECCCC-CEEE--------------------EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccC
Confidence 99998753 1000 0000000 11234455664 666665 332
Q ss_pred CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC------CeEEEEeccCCCceeeeecc
Q 022590 184 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE------GKIFVWELQSSPPVLIARLS 257 (294)
Q Consensus 184 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~ 257 (294)
.+.|..||..+++. ..+ . .......++|+|+++ .|+.+... +.|++|++..........+.
T Consensus 168 ~~~v~~~d~~~g~~-------~~~---~-~~~~p~gl~~spdg~--~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 168 HHSVYRLPPDGSPL-------QRM---A-DLDHPNGLAFSPDEQ--TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp CEEEEEECSSSCCC-------EEE---E-EESSEEEEEECTTSS--EEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEcCCCCcE-------EEE---e-cCCCCcceEEcCCCC--EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 25678888765531 111 1 223467899999984 55555444 78999999765311111111
Q ss_pred ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 258 HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 258 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.........++++++|++.++. .+| |.+|+.+
T Consensus 235 -~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~~ 266 (305)
T 3dr2_A 235 -SVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDSD 266 (305)
T ss_dssp -CCSSSCCCSEEECTTSCEEECC-SSE-EEEECTT
T ss_pred -ECCCCCCCeEEECCCCCEEEec-CCc-EEEECCC
Confidence 1122345678999999855444 554 8888764
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.27 E-value=2.2e-09 Score=90.47 Aligned_cols=247 Identities=13% Similarity=0.123 Sum_probs=140.5
Q ss_pred EEEEeecCCeEEEEEcCCccccceeccc--CcceEEEEeCC--CCCceEEEee------CCCcEEEEEcCCCceEEEeec
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGH--GDSINEIRTQP--LKPSLVVSAS------KDESVRLWNVQTGICILIFAG 94 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h--~~~v~~~~~~~--~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~ 94 (294)
.+++++.|+.|..+|..+|+.+..+... ......+..+| .++. ++.++ .+|.|..||..+|+.+..+..
T Consensus 123 ~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 6888899999999999999988766532 11111111111 0333 44443 378999999999999887763
Q ss_pred cCCC----------------------------CCceeEEEEecCCCceEEeeecCCc-------------------EEEE
Q 022590 95 AGGH----------------------------RNEVLSVDFHPSDIYRIASCGMDNT-------------------VKIW 127 (294)
Q Consensus 95 ~~~~----------------------------~~~v~~l~~~~~~~~~l~~~~~dg~-------------------i~~w 127 (294)
..+. ...-..+++.| +..+++.+..++. |..+
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 1100 01112578888 6677888877653 8889
Q ss_pred eccccccccccceeecCCCCCCCCceeeeceEEeecCCCc-eeecceecc---eEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 128 SMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY-VDCNRWLGD---FILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 128 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
|.++++..-..... +... ......... +..+.+++. .++.++.+|.++++|.++++.......
T Consensus 281 D~~TG~~~W~~~~~----~~d~---------wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 281 NADTGEYVWHYQTT----PGDA---------WDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGI 347 (689)
T ss_dssp ETTTCCEEEEEESS----TTCC---------SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred EccCCceeEeeecC----Cccc---------ccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccc
Confidence 98885432211100 0000 000000000 111122343 788899999999999998874210000
Q ss_pred ce--eeee--------------------------eecC--CCCeeEEEEcccCCcceEEEEcC-----------------
Q 022590 204 AD--ILQK--------------------------YPVP--ECDIWFIKFSCDFHYNAAAIGNR----------------- 236 (294)
Q Consensus 204 ~~--~~~~--------------------------~~~~--~~~i~~~~~~~~~~~~~l~~~~~----------------- 236 (294)
.. -... .+.. ......++++|+.. ++++...
T Consensus 348 ~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~--~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 348 VPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG--LVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp SCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEEECCSSCCCCCS
T ss_pred cccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC--EEEEeccccceeeeeccccccccc
Confidence 00 0000 0000 00112356777653 4444311
Q ss_pred ----------------------------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEE
Q 022590 237 ----------------------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 237 ----------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~v 288 (294)
+|.|+.||+.+++.+...... .++..-.+...+.+++.|+.||.++.
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-----~~~~~g~~~tagglvf~gt~dg~l~a 500 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV-----TIFNGGTLSTAGNLVFEGSADGRVIA 500 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC-----CCccCccceECCCEEEEECCCCcEEE
Confidence 378999999999755444332 22333456667889999999999999
Q ss_pred EecCC
Q 022590 289 WDAIP 293 (294)
Q Consensus 289 w~~~~ 293 (294)
||.++
T Consensus 501 ~D~~t 505 (689)
T 1yiq_A 501 YAADT 505 (689)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99875
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=1.6e-08 Score=73.32 Aligned_cols=194 Identities=9% Similarity=0.033 Sum_probs=126.2
Q ss_pred ccceecccCcc--eEEEEeCCCCCceEEEeeCCC--cEEEEEcCCCceEEEeeccCCCCCceeE--EEEecCCCceEEee
Q 022590 45 LHKSFVGHGDS--INEIRTQPLKPSLVVSASKDE--SVRLWNVQTGICILIFAGAGGHRNEVLS--VDFHPSDIYRIASC 118 (294)
Q Consensus 45 ~~~~~~~h~~~--v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~--l~~~~~~~~~l~~~ 118 (294)
.++++. |... ...|.|+ ++.++.+.+.+| .|+++|+.+++.+..+.. ...... ++.. ++.+.+..
T Consensus 33 vv~~~p-hd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l----~~~~FgeGit~~--g~~ly~lt 103 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL----GKRYFGEGISDW--KDKIVGLT 103 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC----CTTCCEEEEEEE--TTEEEEEE
T ss_pred EEEEec-CCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEec----CCccceeEEEEe--CCEEEEEE
Confidence 345554 4433 4778887 457778888776 899999999999988863 233333 4554 45555666
Q ss_pred ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCC
Q 022590 119 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS 198 (294)
Q Consensus 119 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 198 (294)
-.++.+.++|..+.+ .+..+... ..-..+++++..|+.+..++.|.++|..+.+
T Consensus 104 w~~~~v~v~D~~t~~-----------------------~~~ti~~~-~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-- 157 (262)
T 3nol_A 104 WKNGLGFVWNIRNLR-----------------------QVRSFNYD-GEGWGLTHNDQYLIMSDGTPVLRFLDPESLT-- 157 (262)
T ss_dssp SSSSEEEEEETTTCC-----------------------EEEEEECS-SCCCCEEECSSCEEECCSSSEEEEECTTTCS--
T ss_pred eeCCEEEEEECccCc-----------------------EEEEEECC-CCceEEecCCCEEEEECCCCeEEEEcCCCCe--
Confidence 678999999998843 22222221 2224566677777777778899999998765
Q ss_pred CCCCCceeeeeeecC-----CCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc-cc-------ccCCCe
Q 022590 199 PGEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-HA-------QSKSPI 265 (294)
Q Consensus 199 ~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~-------~~~~~v 265 (294)
.+..++.. -..++.+.+. ++ .+.+..-.++.|.+.|..+++......+. .. ......
T Consensus 158 -------v~~~I~V~~~g~~~~~lNELe~~-~G--~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 158 -------PVRTITVTAHGEELPELNELEWV-DG--EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp -------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred -------EEEEEEeccCCccccccceeEEE-CC--EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 33443331 1334556776 55 45565667889999999999755444443 10 112356
Q ss_pred EEEEEccCCCEEEEeccC
Q 022590 266 RQTAMSYDGSTILSCCED 283 (294)
Q Consensus 266 ~~~~~s~~~~~l~s~~~d 283 (294)
+.+||+|+++.|+..+..
T Consensus 228 NGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEEETTTTEEEEEETT
T ss_pred EEEEEcCCCCEEEEECCC
Confidence 899999988777766543
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.26 E-value=4.6e-09 Score=76.95 Aligned_cols=200 Identities=11% Similarity=0.014 Sum_probs=128.6
Q ss_pred eEEEEEeecCCCceEEEEeec--CCeEEEEEcCCccccceecccCc-ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 11 FYTVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKSFVGHGD-SINEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
...++|+ +++. +.++.+. ++.|+++|+.+++.+..+.-... ....+++. ++.+.++...++.+.++|..+.+
T Consensus 23 ~~Gl~~~--~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 23 TQGLVYA--ENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp EEEEEEC--STTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred cccEEEe--CCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 4678886 7775 4444443 57999999999998887653222 22345555 34566666778999999999999
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
.+..+.. + ... ...+++ ++..++++..++.|.++|..+.+...... +......-..
T Consensus 98 v~~~i~~--g-~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~------------------Vg~~~~p~~~ 153 (266)
T 2iwa_A 98 NIKNFTH--Q-MKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHN------------------VKYNGHRVIR 153 (266)
T ss_dssp EEEEEEC--C-SSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEE------------------CEETTEECCC
T ss_pred EEEEEEC--C-CCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEE------------------ECCCCccccc
Confidence 9988863 2 122 233445 44445555568899999998743211110 0000001112
Q ss_pred eeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecC-------------CCCeeEEEEcccCCcceEEE
Q 022590 168 VDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-------------ECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 168 i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~~~l~~ 233 (294)
+..+.|. +..++....++.|.+.|+.+++ .+..+... ......++++|+++ .++++
T Consensus 154 ~nele~~dg~lyvn~~~~~~V~vID~~tg~---------V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~-~lfVT 223 (266)
T 2iwa_A 154 LNELEYINGEVWANIWQTDCIARISAKDGT---------LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK-RIFVT 223 (266)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEEETTTCC---------EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT-EEEEE
T ss_pred ceeEEEECCEEEEecCCCCeEEEEECCCCc---------EEEEEECCCcccccccccccccCceEEEEEcCCCC-EEEEE
Confidence 3455554 4444444467899999999876 34444321 13568999999987 68888
Q ss_pred EcCCCeEEEEeccCCC
Q 022590 234 GNREGKIFVWELQSSP 249 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~ 249 (294)
+...+.+...++....
T Consensus 224 gk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 224 GKLWPKLFEIKLHLVR 239 (266)
T ss_dssp ETTCSEEEEEEEEECC
T ss_pred CCCCCeEEEEEEeccc
Confidence 8899999999987653
No 233
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=1.9e-08 Score=77.19 Aligned_cols=181 Identities=15% Similarity=0.032 Sum_probs=108.0
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc----cCcceEEEEeCCCCCceEEEeeCC----CcEE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG----HGDSINEIRTQPLKPSLVVSASKD----ESVR 79 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~~d----g~i~ 79 (294)
...+.+++|. |+|+ ++++ +.+ .|.+||..+++....... ....+++++++| +++++++...+ +...
T Consensus 89 ~~~v~~i~~~--~dg~-l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~ 162 (326)
T 2ghs_A 89 PFMGSALAKI--SDSK-QLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGS 162 (326)
T ss_dssp SSCEEEEEEE--ETTE-EEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEE
T ss_pred CCcceEEEEe--CCCe-EEEE-ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceE
Confidence 3567888887 8887 5554 444 599999887765322211 124689999999 77766654321 2334
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecCCCceE-EeeecCCcEEEEecc--cc-ccccccceeecCCCCCCCCceee
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMK--EF-WTYVEKSFTWTDLPSKFPTKYVQ 155 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l-~~~~~dg~i~~wd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
||.+.+++...... .......++|+| +++.+ ++.+.++.|.+||+. ++ .... .
T Consensus 163 l~~~~~g~~~~~~~----~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~------------------~ 219 (326)
T 2ghs_A 163 IYHVAKGKVTKLFA----DISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGK------------------A 219 (326)
T ss_dssp EEEEETTEEEEEEE----EESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSC------------------C
T ss_pred EEEEeCCcEEEeeC----CCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccC------------------c
Confidence 44443444332222 334568999999 66544 555567899999986 32 1000 0
Q ss_pred eceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEc-ccCC
Q 022590 156 FPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS-CDFH 227 (294)
Q Consensus 156 ~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 227 (294)
.....+.........+.++ |++.++...++.|..||.. ++ .+..+..+...+.+++|+ +++.
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~---------~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN---------HIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC---------EEEEEECSCSBEEEEEEESTTSC
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC---------EEEEEECCCCCcEEEEEecCCCC
Confidence 0011111122334556665 6666665567899999983 32 345566666678999998 7764
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.23 E-value=1.7e-07 Score=69.62 Aligned_cols=226 Identities=6% Similarity=-0.107 Sum_probs=131.0
Q ss_pred EEEEeecCCeEEEEEcCCcccc-----ceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLH-----KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHR 99 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 99 (294)
+|+.+.. +.|+.++++..... ..+......+..++|++.++.++++-..++.|..+++..+.....+. ...
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~---~~~ 78 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR---QDL 78 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC---TTC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE---CCC
Confidence 4555543 47999998765421 11222234678999998455566666667899999997655433332 122
Q ss_pred CceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cce
Q 022590 100 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDF 177 (294)
Q Consensus 100 ~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 177 (294)
.....++++|.++.++++-...+.|.++++..... .............++++ +..
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-----------------------~~~~~~~~~~P~~i~vd~~~g~ 135 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-----------------------RVLFDTGLVNPRGIVTDPVRGN 135 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------------------EEEECSSCSSEEEEEEETTTTE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-----------------------EEEEECCCCCccEEEEeeCCCE
Confidence 46789999984556666666678899998864210 00011111234556665 345
Q ss_pred EEEeeC---CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeee
Q 022590 178 ILSKSV---DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA 254 (294)
Q Consensus 178 l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 254 (294)
|+.+.. .+.|..+++..... ..+ ..........+++++++. .+.++-...+.|..+|.........
T Consensus 136 lyv~~~~~~~~~I~~~~~dg~~~-------~~~--~~~~~~~P~gia~d~~~~-~lyv~d~~~~~I~~~~~~g~~~~~~- 204 (267)
T 1npe_A 136 LYWTDWNRDNPKIETSHMDGTNR-------RIL--AQDNLGLPNGLTFDAFSS-QLCWVDAGTHRAECLNPAQPGRRKV- 204 (267)
T ss_dssp EEEEECCSSSCEEEEEETTSCCC-------EEE--ECTTCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTEEEEEEE-
T ss_pred EEEEECCCCCcEEEEEecCCCCc-------EEE--EECCCCCCcEEEEcCCCC-EEEEEECCCCEEEEEecCCCceEEE-
Confidence 444443 36888888753221 111 112234577899999764 3555666678999999875432111
Q ss_pred eccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 255 RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.. . ......++.. ++.++++....+.|.++|..+
T Consensus 205 -~~--~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 205 -LE--G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp -EE--C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred -ec--C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 11 1 1233566654 344444444567898888753
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.20 E-value=2.8e-07 Score=68.47 Aligned_cols=222 Identities=6% Similarity=-0.061 Sum_probs=127.9
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
....++|. +++..++++-..++.|..++.+.......+.........+++.+.++.++++-...+.|.++++......
T Consensus 37 ~~~gi~~d--~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 37 VIIGLAFD--CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEE--TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEe--cCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 34567776 7655366666677899999987655433333223567899999844556666666789999998644332
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEeeec--CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
.... ........++++|.++.++++... .+.|..+++..... ..........
T Consensus 115 ~~~~---~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-----------------------~~~~~~~~~~ 168 (267)
T 1npe_A 115 VLFD---TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-----------------------RILAQDNLGL 168 (267)
T ss_dssp EEEC---SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-----------------------EEEECTTCSC
T ss_pred EEEE---CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-----------------------EEEEECCCCC
Confidence 2222 122457899999944554444433 46788887754110 0001111234
Q ss_pred eeeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 168 VDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 168 i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
...++++ ++.| ++-...+.|..+|+.... ....... ......++. ++. .++++....+.|..+|
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~---------~~~~~~~-~~~P~gi~~--d~~-~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG---------RRKVLEG-LQYPFAVTS--YGK-NLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEE---------EEEEEEC-CCSEEEEEE--ETT-EEEEEETTTTEEEEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCc---------eEEEecC-CCCceEEEE--eCC-EEEEEECCCCeEEEEe
Confidence 4566665 4444 555566899999987432 1111121 233455654 332 4555555678999999
Q ss_pred ccCCCceeeeeccccccCCCeEEEEEccCCC
Q 022590 245 LQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 275 (294)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 275 (294)
..+++. ...+.. +.......+++.|++.
T Consensus 236 ~~~g~~--~~~i~~-g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 236 LAISKE--MDTFHP-HKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEE--EEEECC-SSCCCCCCEEEECSCC
T ss_pred CCCCCc--eEEEcc-ccccccceeeecCccC
Confidence 988753 233321 1112356788888764
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.16 E-value=8.8e-08 Score=69.44 Aligned_cols=193 Identities=8% Similarity=-0.041 Sum_probs=125.3
Q ss_pred ccceecccCcc--eEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC
Q 022590 45 LHKSFVGHGDS--INEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN 122 (294)
Q Consensus 45 ~~~~~~~h~~~--v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg 122 (294)
.+.++. |... ...|.|+. +.++++.+.+|.|+++|+.+++.+..+ . ....---.+++. ++.+.+..-.++
T Consensus 45 Vv~~~p-hd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l--~~~~FgeGit~~--g~~Ly~ltw~~~ 116 (268)
T 3nok_A 45 IIREYP-HATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-R--LGNIFAEGLASD--GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEE-CCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-E--CTTCCEEEEEEC--SSCEEEEESSSC
T ss_pred EEEEEc-CCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-C--CCCcceeEEEEe--CCEEEEEEccCC
Confidence 445553 4332 46788874 678888899999999999999988877 2 122122345554 456566666789
Q ss_pred cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCC
Q 022590 123 TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEG 202 (294)
Q Consensus 123 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 202 (294)
.+.+||..+.+ .+..+.. ...-..+++++..|+.+..++.|.++|..+.+
T Consensus 117 ~v~V~D~~Tl~-----------------------~~~ti~~-~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~------ 166 (268)
T 3nok_A 117 LLFTWSGMPPQ-----------------------RERTTRY-SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA------ 166 (268)
T ss_dssp EEEEEETTTTE-----------------------EEEEEEC-SSCCCCEEEETTEEEEECSSSEEEEECTTTCC------
T ss_pred EEEEEECCcCc-----------------------EEEEEeC-CCceeEEecCCCEEEEECCCCEEEEEcCCCCe------
Confidence 99999999843 2222222 22235666778888777779999999998765
Q ss_pred CceeeeeeecCC-----CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc---------cccCCCeEEE
Q 022590 203 TADILQKYPVPE-----CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH---------AQSKSPIRQT 268 (294)
Q Consensus 203 ~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~~~~v~~~ 268 (294)
.+..+.... ..++.+.|. ++ .+.+..-.++.|.+.|..+++......+.. .....-.+.|
T Consensus 167 ---v~~~I~V~~~g~~v~~lNeLe~~-dG--~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGI 240 (268)
T 3nok_A 167 ---LVGAVQVKLRGQPVELINELECA-NG--VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGI 240 (268)
T ss_dssp ---EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEE
T ss_pred ---EEEEEEeCCCCcccccccccEEe-CC--EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEE
Confidence 333333211 234566766 55 455555578899999999997554444330 1122467999
Q ss_pred EEccCCCEEEEec
Q 022590 269 AMSYDGSTILSCC 281 (294)
Q Consensus 269 ~~s~~~~~l~s~~ 281 (294)
|++|+++.|+..+
T Consensus 241 A~dp~~~rlfVTG 253 (268)
T 3nok_A 241 AVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTTCCEEEEE
T ss_pred EEcCCCCEEEEeC
Confidence 9999766555444
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.14 E-value=1.9e-07 Score=67.06 Aligned_cols=193 Identities=10% Similarity=-0.036 Sum_probs=123.4
Q ss_pred ccceecccCc--ceEEEEeCCCCCceEEEeeCCC--cEEEEEcCCCceEEEeeccCCCCCce--eEEEEecCCCceEEee
Q 022590 45 LHKSFVGHGD--SINEIRTQPLKPSLVVSASKDE--SVRLWNVQTGICILIFAGAGGHRNEV--LSVDFHPSDIYRIASC 118 (294)
Q Consensus 45 ~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v--~~l~~~~~~~~~l~~~ 118 (294)
.+.++. |.. -...+.|++ +.++.+.+.+| .|+.+|+.+++.+..+.. .... -.+++. ++.+....
T Consensus 11 v~~~~p-hd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l----~~~~fgeGi~~~--~~~ly~lt 81 (243)
T 3mbr_X 11 VVKRYP-HDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEV----PPPYFGAGIVAW--RDRLIQLT 81 (243)
T ss_dssp EEEEEE-CCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEEC----CTTCCEEEEEEE--TTEEEEEE
T ss_pred EEEEcC-CCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeC----CCCcceeEEEEe--CCEEEEEE
Confidence 344453 443 356899986 56777777754 899999999999988863 2233 334444 55666666
Q ss_pred ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCC
Q 022590 119 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS 198 (294)
Q Consensus 119 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 198 (294)
-.++.+.++|..+.+. +..+... ..-..+++++..|+.+..++.|.++|..+.+
T Consensus 82 w~~~~v~v~D~~tl~~-----------------------~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~-- 135 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTP-----------------------RARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQ-- 135 (243)
T ss_dssp SSSSEEEEEETTTTEE-----------------------EEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCC--
T ss_pred eeCCEEEEEECCcCcE-----------------------EEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCe--
Confidence 7789999999988432 2222221 2224556667777776778999999998765
Q ss_pred CCCCCceeeeeeecCC-----CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc---------cccCCC
Q 022590 199 PGEGTADILQKYPVPE-----CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH---------AQSKSP 264 (294)
Q Consensus 199 ~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~~~~ 264 (294)
.+..++... ..++.+.+. ++ .+.+..-.+..|.+.|.++++......+.. .....-
T Consensus 136 -------~~~~I~V~~~g~~~~~lNeLe~~-~G--~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~v 205 (243)
T 3mbr_X 136 -------QVGSIKVTAGGRPLDNLNELEWV-NG--ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDV 205 (243)
T ss_dssp -------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSC
T ss_pred -------EEEEEEEccCCcccccceeeEEe-CC--EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCc
Confidence 333333311 234556655 44 355555568899999999997554444331 012245
Q ss_pred eEEEEEccCCCEEEEecc
Q 022590 265 IRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 265 v~~~~~s~~~~~l~s~~~ 282 (294)
.+.+|++|+++.|+..+.
T Consensus 206 lNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 206 LNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEEEETTTTEEEEEET
T ss_pred eEEEEEcCCCCEEEEECC
Confidence 789999998776665543
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.14 E-value=6.6e-08 Score=70.07 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=113.4
Q ss_pred EEEEEeecCCCceEEEEeecCC--eEEEEEcCCccccceecccCcceEE--EEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 12 YTVSWACNVDGIPFLVAGGING--IIRVIDVSNEKLHKSFVGHGDSINE--IRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~h~~~v~~--~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
..+.|+ ++. +..+.+.+| .|+++|+++++.+..+.... .... ++.. ++.+.++...++.+.++|..+.+
T Consensus 46 qGL~~~---~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 46 EGFFYR---NGY-FYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEE---TTE-EEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC
T ss_pred ceEEEE---CCE-EEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc
Confidence 455654 565 777777766 89999999999988876433 3333 4443 44566666678999999999999
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC-C
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS-N 166 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 166 (294)
.+..+.. ...-..++ + ++..|+.+..++.|.++|..+........ +. ..+.+ .
T Consensus 119 ~~~ti~~----~~eG~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~------------------V~-~~g~~~~ 172 (262)
T 3nol_A 119 QVRSFNY----DGEGWGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTIT------------------VT-AHGEELP 172 (262)
T ss_dssp EEEEEEC----SSCCCCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEE------------------CE-ETTEECC
T ss_pred EEEEEEC----CCCceEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEE------------------ec-cCCcccc
Confidence 9999883 22223444 4 44445555557889999998743211111 00 00111 2
Q ss_pred ceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec------------CCCCeeEEEEcccCCcceEEE
Q 022590 167 YVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV------------PECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 167 ~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~~~l~~ 233 (294)
.++.+.|. |...+..-.++.|.+.|.++++. +..+.. .....+.++++|+.+ .++++
T Consensus 173 ~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V---------~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~-~lfVT 242 (262)
T 3nol_A 173 ELNELEWVDGEIFANVWQTNKIVRIDPETGKV---------TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH-RLFVT 242 (262)
T ss_dssp CEEEEEEETTEEEEEETTSSEEEEECTTTCBE---------EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT-EEEEE
T ss_pred ccceeEEECCEEEEEEccCCeEEEEECCCCcE---------EEEEECCcCccccccccCcCCceEEEEEcCCCC-EEEEE
Confidence 23345554 55555544688999999998763 222222 124578899999886 56666
Q ss_pred Ec
Q 022590 234 GN 235 (294)
Q Consensus 234 ~~ 235 (294)
|-
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 63
No 239
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=1.3e-08 Score=80.05 Aligned_cols=217 Identities=12% Similarity=0.011 Sum_probs=126.4
Q ss_pred EEEEeecCCCceEEEEee----------cCCeEEEEEcCCccccceeccc-------CcceEEEEeCCCCCceEEEeeC-
Q 022590 13 TVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH-------GDSINEIRTQPLKPSLVVSASK- 74 (294)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~- 74 (294)
.++++ |||+ +++++. .++.|.++|..+++.+.++.-. ......++++| ++++++.+..
T Consensus 122 gia~S--pDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAA--EDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFS 197 (426)
T ss_dssp EEEEC--TTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECS
T ss_pred ceEEC--CCCC-EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecC
Confidence 56665 9999 565554 4678999999999988877532 23456789999 8888887764
Q ss_pred -CCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccc--cceeecCCCCC---
Q 022590 75 -DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE--KSFTWTDLPSK--- 148 (294)
Q Consensus 75 -dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~--~~~~~~~~~~~--- 148 (294)
++.|.+.|+.+++.+..+.. .+. ....|.+...+++.+.||.+.+.+....+.... ..+.....+..
T Consensus 198 ~~~~VsVID~~t~kvv~~I~v----~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~ 270 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLDV----PDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP 270 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEEC----CSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred CCCeEEEEECCCCeEEEEEEc----CCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence 58899999999999888773 111 223332335555666677776666633221100 00000000000
Q ss_pred ----CCCce----eeeceEEeec-----------------------CCCceeeccee--cceEEEeeC----------CC
Q 022590 149 ----FPTKY----VQFPVFIASV-----------------------HSNYVDCNRWL--GDFILSKSV----------DN 185 (294)
Q Consensus 149 ----~~~~~----~~~~~~~~~~-----------------------~~~~i~~~~~~--~~~l~~~~~----------d~ 185 (294)
..... ....+..... .......+.++ ++.+++... ++
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~ 350 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASR 350 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEE
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCC
Confidence 00000 0000000000 00111113444 455555432 35
Q ss_pred eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc-CCCeEEEEeccCCCce
Q 022590 186 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPV 251 (294)
Q Consensus 186 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~ 251 (294)
.|.++|..+.+ .+..++... ....+.|+|+++. .+++.. .++.|.++|+.+.+.+
T Consensus 351 ~VsVID~~T~k---------vv~~I~vg~-~P~gia~spDg~~-~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 351 FVVVLNAETGE---------RINKIELGH-EIDSINVSQDAEP-LLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEEEETTTCC---------EEEEEEEEE-EECEEEECCSSSC-EEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEEECCCCe---------EEEEEECCC-CcCeEEEccCCCE-EEEEEcCCCCeEEEEECCCCCEE
Confidence 79999998776 455555432 4778999999952 555555 6999999999998743
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=6.2e-08 Score=70.21 Aligned_cols=178 Identities=9% Similarity=0.020 Sum_probs=116.9
Q ss_pred EEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceE--EEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 12 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSIN--EIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
..+.|. ++. +..+.+.+|.|+++|+++++.+..+ -. .... .+++. ++.+.++...++.+.++|..+.+.+
T Consensus 58 qGL~~~---~~~-Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 58 QGLVFH---QGH-FFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEE---TTE-EEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ceEEEE---CCE-EEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 456664 344 7888888899999999999998887 32 3333 35554 4566666778899999999999999
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC---C
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS---N 166 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 166 (294)
..+.. ...-..+++ ++..|+.+..++.|.++|..+.+..... ....+. .
T Consensus 130 ~ti~~----~~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I---------------------~V~~~g~~v~ 181 (268)
T 3nok_A 130 RTTRY----SGEGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAV---------------------QVKLRGQPVE 181 (268)
T ss_dssp EEEEC----SSCCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEE---------------------ECEETTEECC
T ss_pred EEEeC----CCceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEE---------------------EeCCCCcccc
Confidence 99883 233355554 3445555556889999999884321111 111122 2
Q ss_pred ceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec-------------CCCCeeEEEEcccCCcceEE
Q 022590 167 YVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-------------PECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 167 ~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~l~ 232 (294)
.++.+.|. |...+..-.+..|.+.|.++++. +..+.. .....+.+++.|+.+ .+++
T Consensus 182 ~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V---------~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~-rlfV 251 (268)
T 3nok_A 182 LINELECANGVIYANIWHSSDVLEIDPATGTV---------VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG-RIFM 251 (268)
T ss_dssp CEEEEEEETTEEEEEETTCSEEEEECTTTCBE---------EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC-CEEE
T ss_pred cccccEEeCCEEEEEECCCCeEEEEeCCCCcE---------EEEEECCCCcccccccccCcCCceEEEEEcCCCC-EEEE
Confidence 33455564 55555444688999999998863 222221 234678999999886 5777
Q ss_pred EEc
Q 022590 233 IGN 235 (294)
Q Consensus 233 ~~~ 235 (294)
+|-
T Consensus 252 TGK 254 (268)
T 3nok_A 252 TGK 254 (268)
T ss_dssp EET
T ss_pred eCC
Confidence 764
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=8.6e-08 Score=80.72 Aligned_cols=236 Identities=9% Similarity=0.035 Sum_probs=134.0
Q ss_pred EEEEeec------CCeEEEEEcCCccccceecccCc--------------------------------ceEEEEeCCCCC
Q 022590 25 FLVAGGI------NGIIRVIDVSNEKLHKSFVGHGD--------------------------------SINEIRTQPLKP 66 (294)
Q Consensus 25 ~l~~~~~------dg~i~iw~~~~~~~~~~~~~h~~--------------------------------~v~~~~~~~~~~ 66 (294)
.+++++. +|.|+.+|..+++.+.++..... ....++++| +.
T Consensus 176 ~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~ 254 (677)
T 1kb0_A 176 KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-EL 254 (677)
T ss_dssp EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TT
T ss_pred EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CC
Confidence 4555553 69999999999988766643211 113577888 66
Q ss_pred ceEEEeeCCC-------------------cEEEEEcCCCceEEEeeccCCCC-------CceeEEEEecCCC---ceEEe
Q 022590 67 SLVVSASKDE-------------------SVRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDI---YRIAS 117 (294)
Q Consensus 67 ~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~---~~l~~ 117 (294)
.+++.+..++ .|..+|..+|+.+..++.. .|. ....-+.... ++ ..++.
T Consensus 255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~ 332 (677)
T 1kb0_A 255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQET-PGDNWDYTSTQPMILADIKI-AGKPRKVILH 332 (677)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCCEEEEEEE-TTEEEEEEEE
T ss_pred CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecC-CCcccccccCCCcEEEeccc-CCcEeeEEEE
Confidence 7777776654 5999999999998887742 121 1222333333 45 67899
Q ss_pred eecCCcEEEEeccccccccccceeecCCCCC--CCCceee--------eceEEeecCCC--ceeeccee--cceEEEeeC
Q 022590 118 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK--FPTKYVQ--------FPVFIASVHSN--YVDCNRWL--GDFILSKSV 183 (294)
Q Consensus 118 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~--~i~~~~~~--~~~l~~~~~ 183 (294)
++.+|.++++|..+++......+........ ....... ..........+ .-..++++ ..++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 9999999999999865543322110000000 0000000 00000000000 00133444 344444322
Q ss_pred -------------------------------------------CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEE
Q 022590 184 -------------------------------------------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 220 (294)
Q Consensus 184 -------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 220 (294)
.+.|..||+.+++ .+-..+.. .++...
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~---------~~W~~~~~-~~~~~g 482 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK---------AAWSVEHV-SPWNGG 482 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE---------EEEEEEES-SSCCCC
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc---------EEeecCCC-CCCcCc
Confidence 2779999998775 23333322 223344
Q ss_pred EEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEE
Q 022590 221 KFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTIL 278 (294)
Q Consensus 221 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 278 (294)
.+...+ ..++.++.+|.+++||.++++.+.......... -.-+.+.++|+.++
T Consensus 483 ~~~~~g--~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~---~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 483 TLTTAG--NVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV---AAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEETT--TEEEEECTTSEEEEEETTTCCEEEEEECSSCCC---SCCEEEEETTEEEE
T ss_pred ceEeCC--CEEEEECCCCcEEEEECCCCceeeeeeCCCCcc---cCCEEEEeCCEEEE
Confidence 455665 478888999999999999998766665543222 23455677886443
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=1.3e-07 Score=79.82 Aligned_cols=231 Identities=11% Similarity=0.088 Sum_probs=129.2
Q ss_pred CCeEEEEEcCCccccceeccc-------------------------------CcceEEEEeCCCCCceEEEeeCCCc---
Q 022590 32 NGIIRVIDVSNEKLHKSFVGH-------------------------------GDSINEIRTQPLKPSLVVSASKDES--- 77 (294)
Q Consensus 32 dg~i~iw~~~~~~~~~~~~~h-------------------------------~~~v~~~~~~~~~~~~l~s~~~dg~--- 77 (294)
+|.|+.||..+|+.+..+... ......+++.| +..+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccc
Confidence 689999999999987665421 01112577888 6678888877764
Q ss_pred ----------------EEEEEcCCCceEEEeeccCCCC-------CceeEEEEecCCCc---eEEeeecCCcEEEEeccc
Q 022590 78 ----------------VRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDIY---RIASCGMDNTVKIWSMKE 131 (294)
Q Consensus 78 ----------------i~vwd~~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~~---~l~~~~~dg~i~~wd~~~ 131 (294)
|..+|..+|+.+..++.. .|. .++....... ++. .++.++.+|.++++|.++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~t 338 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT-PGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRAT 338 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecC-CcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCC
Confidence 999999999999887642 121 1222222222 443 788999999999999988
Q ss_pred cccccccceee---cCCCCCCCCcee-----------eeceEEeecCCC--ceeeccee--cceEEEee-----------
Q 022590 132 FWTYVEKSFTW---TDLPSKFPTKYV-----------QFPVFIASVHSN--YVDCNRWL--GDFILSKS----------- 182 (294)
Q Consensus 132 ~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~--~i~~~~~~--~~~l~~~~----------- 182 (294)
++......+.. ............ ...........+ .-..++++ ..++++..
T Consensus 339 G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 339 GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 66542221110 000000000000 000000000000 00113333 22333321
Q ss_pred ----------------------------------CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCc
Q 022590 183 ----------------------------------VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 228 (294)
Q Consensus 183 ----------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 228 (294)
.+|.|+.||+.+++ .+-..+.+. +...-.+...+
T Consensus 419 ~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~---------~~W~~~~~~-~~~~g~~~tag-- 486 (689)
T 1yiq_A 419 EAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ---------AAWEVPYVT-IFNGGTLSTAG-- 486 (689)
T ss_dssp SCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE---------EEEEEEESS-SCCCCEEEETT--
T ss_pred ccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC---------eEeEccCCC-CccCccceECC--
Confidence 14779999998776 333333322 22223455555
Q ss_pred ceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCC-EEEEe
Q 022590 229 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSC 280 (294)
Q Consensus 229 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~ 280 (294)
.+++.|+.||.++.||.++++.+....+.......+ +.|..+|+ |+++.
T Consensus 487 glvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p---~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 487 NLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAP---VTYSVDGEQYVTFM 536 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTEEEEEEE
T ss_pred CEEEEECCCCcEEEEECCCCccceeeeCCCCcccCc---eEEEECCEEEEEEE
Confidence 488889999999999999998766666543322233 56677886 44443
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.06 E-value=1.4e-08 Score=78.62 Aligned_cols=213 Identities=9% Similarity=-0.033 Sum_probs=122.0
Q ss_pred EEEEeecCCCceEEEEee----------cCCeEEEEEcCCccccceeccc-------CcceEEEEeCCCCCceEEEeeC-
Q 022590 13 TVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH-------GDSINEIRTQPLKPSLVVSASK- 74 (294)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~- 74 (294)
.+.++ |||+ +++++. .++.|.+||+.+++.+.++... ......++++| ++++++.+..
T Consensus 69 ~i~~s--pDg~-~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~ 144 (368)
T 1mda_H 69 LAVAG--HSGS-DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFG 144 (368)
T ss_dssp EEEEC--TTSS-CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECS
T ss_pred ceEEC--CCCC-EEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEccC
Confidence 46665 9998 666664 4689999999999999888643 13457899999 8888887764
Q ss_pred -CCcEEE--EEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccc-----ccccccc--ceeecC
Q 022590 75 -DESVRL--WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-----FWTYVEK--SFTWTD 144 (294)
Q Consensus 75 -dg~i~v--wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~-----~~~~~~~--~~~~~~ 144 (294)
+..+.+ +|..+ +..+.. .+. ....|.+...+++.+.||.+.+.|+.. ++..... .+....
T Consensus 145 ~~~~v~V~~iD~~t---v~~i~v----~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~ 214 (368)
T 1mda_H 145 SSAAAGLSVPGASD---DQLTKS----ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS 214 (368)
T ss_dssp SSCEEEEEETTTEE---EEEEEC----SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS
T ss_pred CCCeEEEEEEchhh---ceEEEC----CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC
Confidence 467888 99877 444442 111 122343445566667788888888765 2211000 000000
Q ss_pred CCC--CCCCceee---eceEEeec-----------------------CCCceeeccee--cceEEEeeC---------CC
Q 022590 145 LPS--KFPTKYVQ---FPVFIASV-----------------------HSNYVDCNRWL--GDFILSKSV---------DN 185 (294)
Q Consensus 145 ~~~--~~~~~~~~---~~~~~~~~-----------------------~~~~i~~~~~~--~~~l~~~~~---------d~ 185 (294)
.+. ........ ..+..+.. .+.....+.++ ++.++++.. ++
T Consensus 215 ~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~ 294 (368)
T 1mda_H 215 QAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAE 294 (368)
T ss_dssp CCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEE
T ss_pred CccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCC
Confidence 000 00000000 00000000 00111113344 566665432 23
Q ss_pred eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc-CCCeEEEEeccCCCc
Q 022590 186 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPP 250 (294)
Q Consensus 186 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 250 (294)
.+.++|+.+.+ .+..++... ....+.|+|+++ .++++.. .++.|.++|+.+.+.
T Consensus 295 ~~~ViD~~t~~---------vv~~i~vg~-~p~gi~~s~Dg~-~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 295 NTSSVTASVGQ---------TSGPISNGH-DSDAIIAAQDGA-SDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEEEEESSSCC---------EEECCEEEE-EECEEEECCSSS-CEEEEEETTTTEEEEEESSSCEE
T ss_pred CEEEEECCCCe---------EEEEEECCC-CcceEEECCCCC-EEEEEccCCCCeEEEEECCCCcE
Confidence 56699998775 344444332 477899999996 3555565 699999999999863
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.06 E-value=1.7e-08 Score=81.56 Aligned_cols=216 Identities=12% Similarity=0.099 Sum_probs=140.2
Q ss_pred CCCceEEEEeecCCeEEEEEcCCccccceecc-cCcceEEEEe-C-CCCCceEEEee------------------CCCcE
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-HGDSINEIRT-Q-PLKPSLVVSAS------------------KDESV 78 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~~l~s~~------------------~dg~i 78 (294)
+||+.++++...++.|.+.|+++.+..+.+.- .......+++ + | ++.++++++ .++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceE
Confidence 57884455555567899999999988774432 2245788887 4 7 777777774 35689
Q ss_pred EEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC---------------cEEEEeccccccccccceeec
Q 022590 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN---------------TVKIWSMKEFWTYVEKSFTWT 143 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg---------------~i~~wd~~~~~~~~~~~~~~~ 143 (294)
.+.|..+.+....+.. .+....++++| ++.++++.+.+. .+.+.|......
T Consensus 178 tvID~~t~~v~~qI~V----gg~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~--------- 243 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLV----SGNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK--------- 243 (595)
T ss_dssp EEEETTTTEEEEEEEE----SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH---------
T ss_pred EEEECCCCeEEEEEEe----CCCccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeE---------
Confidence 9999999988888773 22457788999 777777777653 244444333110
Q ss_pred CCCCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEc
Q 022590 144 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 223 (294)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 223 (294)
..-.|+.... +.|.+.|.++.+. . ..+..++.. .....+.++
T Consensus 244 ---------------------------~v~~Gk~~~i----~~V~VID~~~~~~-----~-~~~~~Ipvg-~~PhGv~~s 285 (595)
T 1fwx_A 244 ---------------------------AIAAGDYQEL----NGVKVVDGRKEAS-----S-LFTRYIPIA-NNPHGCNMA 285 (595)
T ss_dssp ---------------------------HHHHTCSEEE----TTEEEEECSGGGC-----C-SSEEEEEEE-SSCCCEEEC
T ss_pred ---------------------------eccCCCeeEE----CcEEEEeCcccCC-----c-eeEEEEecC-CCceEEEEc
Confidence 0001333332 4599999987310 0 013333332 235579999
Q ss_pred ccCCcceEEEEcCCCeEEEEeccCCCc----------eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 224 CDFHYNAAAIGNREGKIFVWELQSSPP----------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 224 ~~~~~~~l~~~~~dg~i~i~d~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
||++ ..++++..+..|.++|+.+.+. ...... .-......++|+|+|...++.-.|+.|.+||++
T Consensus 286 PDGk-~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 286 PDKK-HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp TTSS-EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC---BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred CCCC-EEEEeCCCCCeEEEEECcccccccccccCcccceEEEc---CCCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 9997 4667777899999999986421 011222 222457889999999444566789999999975
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=1.7e-07 Score=73.33 Aligned_cols=194 Identities=11% Similarity=0.114 Sum_probs=115.0
Q ss_pred CCCCceEEEeeCCCcEEEEEcCCC----ceEEEeec--c--CCCCCceeEEEEecCCCceEEeeecC------CcEEEEe
Q 022590 63 PLKPSLVVSASKDESVRLWNVQTG----ICILIFAG--A--GGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWS 128 (294)
Q Consensus 63 ~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~--~--~~~~~~v~~l~~~~~~~~~l~~~~~d------g~i~~wd 128 (294)
+....+++++..+++|.++|+.+. +....+.. . ..-......+...| ++ +++++..+ |.+.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 634445666778899999999755 44454420 0 00112456678888 77 66666555 7899999
Q ss_pred ccccccccccceeecCCCCCCCCceeeeceEEeecC--C-Cceeeccee--cceEEEee-------------------CC
Q 022590 129 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH--S-NYVDCNRWL--GDFILSKS-------------------VD 184 (294)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~i~~~~~~--~~~l~~~~-------------------~d 184 (294)
..+++. +...... . ..-..+.|+ ++.+++.. .+
T Consensus 171 ~~T~~v-----------------------~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~ 227 (462)
T 2ece_A 171 HYSFEP-----------------------LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYG 227 (462)
T ss_dssp TTTCCE-----------------------EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSC
T ss_pred CCCCeE-----------------------EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccC
Confidence 987432 1222111 1 111123333 66677663 47
Q ss_pred CeEEEecCCCCCCCCCCCCceeeeeeecCC--CCeeEEEE--cccCCcceEEEEc------CCCeEEEEeccCCCceeee
Q 022590 185 NEIVLWEPKMKEQSPGEGTADILQKYPVPE--CDIWFIKF--SCDFHYNAAAIGN------REGKIFVWELQSSPPVLIA 254 (294)
Q Consensus 185 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~--~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~ 254 (294)
.+|.+||+.+++ .+..+.... .....+.| +|+++ +++++. .++.|.+|..+.++.....
T Consensus 228 d~V~v~D~~~~k---------~~~tI~vg~~g~~P~~i~f~~~Pdg~--~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 228 NRIHFWDLRKRK---------RIHSLTLGEENRMALELRPLHDPTKL--MGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp CEEEEEETTTTE---------EEEEEESCTTEEEEEEEEECSSTTCC--EEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCCc---------EeeEEecCCCCCccceeEeeECCCCC--EEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 899999998653 455555431 23445555 88885 444444 5678887776654321111
Q ss_pred ec--ccc--------------ccCCCeEEEEEccCCCEEEEec-cCCcEEEEecC
Q 022590 255 RL--SHA--------------QSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 292 (294)
Q Consensus 255 ~~--~~~--------------~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~ 292 (294)
.+ ... +.......+.+||||++|.++. ..+.|.+||+.
T Consensus 297 vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 297 VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 11 100 0024578899999999998775 46789999985
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.06 E-value=5e-07 Score=64.95 Aligned_cols=190 Identities=9% Similarity=0.062 Sum_probs=114.6
Q ss_pred eEEEEEeecCCCceEEEEeecC--CeEEEEEcCCccccceecccCcce-EEEEeCCCCCceEEEeeCCCcEEEEEcCCCc
Q 022590 11 FYTVSWACNVDGIPFLVAGGIN--GIIRVIDVSNEKLHKSFVGHGDSI-NEIRTQPLKPSLVVSASKDESVRLWNVQTGI 87 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 87 (294)
...+.|. + +. +..+.+.+ ..|+.+|+.+++.+..+....... -.++.. ++.+.+....++.+.++|..+.+
T Consensus 23 tqGL~~~--~-~~-LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYL--R-GH-LYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEE--T-TE-EEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE
T ss_pred cccEEEE--C-CE-EEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc
Confidence 4467775 4 54 66666665 489999999999988776433221 234443 45666667788999999999999
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC--
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS-- 165 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 165 (294)
.+..+.. ...-..++. ++..|+.+..++.|.++|..+........ ...+.
T Consensus 97 ~~~ti~~----~~~Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~---------------------V~~~g~~ 148 (243)
T 3mbr_X 97 PRARFRY----PGEGWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIK---------------------VTAGGRP 148 (243)
T ss_dssp EEEEEEC----SSCCCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEE---------------------CEETTEE
T ss_pred EEEEEeC----CCCceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEE---------------------EccCCcc
Confidence 9999883 333355554 34445555568899999998843211111 11111
Q ss_pred -Cceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee----ecCCCCeeEEEEcccCCcceEEEEc
Q 022590 166 -NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY----PVPECDIWFIKFSCDFHYNAAAIGN 235 (294)
Q Consensus 166 -~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~l~~~~ 235 (294)
..++.+.+. +..++..-.+..|.+.|.++++.........+.... .......+.+++.|+.+ .++++|-
T Consensus 149 ~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~lfVTGK 223 (243)
T 3mbr_X 149 LDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD-RLFVTGK 223 (243)
T ss_dssp CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT-EEEEEET
T ss_pred cccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC-EEEEECC
Confidence 233445554 554444446788999999987631110000000000 11224678899999886 5666664
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.03 E-value=2.2e-06 Score=65.04 Aligned_cols=238 Identities=11% Similarity=0.047 Sum_probs=131.9
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCC--cEEEEEcCCCc
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE--SVRLWNVQTGI 87 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~ 87 (294)
....++|. ++|+ ++++-..++.|..||.+.. ....+. ....+..+++.+ +++++++..... .|..++..+++
T Consensus 33 ~pegia~~--~~g~-lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 33 FLENLASA--PDGT-IFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEEEC--TTSC-EEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CcceEEEC--CCCC-EEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCe
Confidence 45567776 8888 7777768899999997653 333332 345688999999 777666554322 46667777777
Q ss_pred eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 88 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 88 ~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
....... ........++..+ ++..+++-..++.|..+|........... ....... .+ ...-..
T Consensus 107 ~~~~~~~--~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~---~~~~~~~------~~----~~~~~~ 170 (306)
T 2p4o_A 107 VETLLTL--PDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLE---HPMLARS------NS----ESVFPA 170 (306)
T ss_dssp EEEEEEC--TTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEE---CGGGSCS------ST----TCCSCS
T ss_pred EEEEEeC--CCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEE---CCccccc------cc----cCCCCc
Confidence 5443331 1222345556555 55555555568888888876421000000 0000000 00 000011
Q ss_pred eeecceecceE-EEeeCCCeEEEecCCC-CCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 168 VDCNRWLGDFI-LSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 168 i~~~~~~~~~l-~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
...+..+++.| ++-...+.|..||+.. +.. .....+... .....+++.+++ ++.++....+.|.+++.
T Consensus 171 pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~----~~~~~~~~~----~~P~gi~vd~dG--~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKP----GEPEIFVEQ----TNIDDFAFDVEG--NLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEEEBCTTSCB----CCCEEEEES----CCCSSEEEBTTC--CEEEECBTTCCEEEECT
T ss_pred CCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCC----CccEEEecc----CCCCCeEECCCC--CEEEEeCCCCeEEEECC
Confidence 22234445544 4555678999999875 221 011112111 234568899988 46666666788999997
Q ss_pred cCCCceeeeeccccccCCCeEEEEEc---cCCCEEEEecc
Q 022590 246 QSSPPVLIARLSHAQSKSPIRQTAMS---YDGSTILSCCE 282 (294)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~ 282 (294)
. ++........ ......++++|. |+++.|+.++.
T Consensus 241 ~-G~~~~~~~~~--~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 241 D-RSTTIIAQAE--QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp T-CCEEEEECGG--GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred C-CCEEEEeecc--cccCCceEEEEecccCCCCEEEEECC
Confidence 5 4322222222 222458999998 88877766543
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.02 E-value=7.4e-08 Score=81.03 Aligned_cols=237 Identities=12% Similarity=0.095 Sum_probs=135.9
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccC----cceEE-EEeCCCCCceEEEeeC------CCcEEEEEcCCCceEEEee
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHG----DSINE-IRTQPLKPSLVVSASK------DESVRLWNVQTGICILIFA 93 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~----~~v~~-~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~ 93 (294)
.++.++.|+.|..+|..+|+.+..+.... ..+.+ -... ++ .++.+.. +|.|..+|..+|+.+..+.
T Consensus 119 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 68888899999999999999887665421 11111 0111 33 4444432 5899999999999988876
Q ss_pred ccCCCC----------------------------CceeEEEEecCCCceEEeeecCC-------------------cEEE
Q 022590 94 GAGGHR----------------------------NEVLSVDFHPSDIYRIASCGMDN-------------------TVKI 126 (294)
Q Consensus 94 ~~~~~~----------------------------~~v~~l~~~~~~~~~l~~~~~dg-------------------~i~~ 126 (294)
...+.. .....+++.| ...+++.+..++ .|..
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 311110 0112467887 566677776665 3888
Q ss_pred EeccccccccccceeecCCCCCCCCceeeeceEEeecCC-------Cc--eeecceecc---eEEEeeCCCeEEEecCCC
Q 022590 127 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS-------NY--VDCNRWLGD---FILSKSVDNEIVLWEPKM 194 (294)
Q Consensus 127 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--i~~~~~~~~---~l~~~~~d~~i~iwd~~~ 194 (294)
+|.++++..-.... ..|. .+ +..+.++++ .++.++.+|.++++|..+
T Consensus 275 lD~~tG~~~W~~~~---------------------~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 275 IRPDTGKLAWHYQV---------------------TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp ECTTTCCEEEEEES---------------------STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred EcCCCCceeeEeec---------------------CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 88887543221111 0011 11 111223343 688899999999999998
Q ss_pred CCCCCCCCC----c---------eeee------------eeecCC--CCeeEEEEcccCCcceEEE--------------
Q 022590 195 KEQSPGEGT----A---------DILQ------------KYPVPE--CDIWFIKFSCDFHYNAAAI-------------- 233 (294)
Q Consensus 195 ~~~~~~~~~----~---------~~~~------------~~~~~~--~~i~~~~~~~~~~~~~l~~-------------- 233 (294)
++....... . ..+. ..+... .....++++|+.. .++.
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g--~~yv~~~~~~~~~~~~~~ 411 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG--LVYIPYQEVPGVYRNEGK 411 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEECCCGG
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC--EEEEeccccceEeeeecc
Confidence 874210000 0 0000 000000 0011245666542 2222
Q ss_pred ----------------------EcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 234 ----------------------GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 234 ----------------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
...+|.|..||+.+++.+...... .+.....+...+.+++.++.||.++.||.
T Consensus 412 ~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 412 DFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-----THWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp GCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-----SSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-----CCCcCceeEeCCCEEEEECCcccchhhhh
Confidence 113488999999998755444432 22333445557788999999999999998
Q ss_pred CC
Q 022590 292 IP 293 (294)
Q Consensus 292 ~~ 293 (294)
++
T Consensus 487 ~t 488 (668)
T 1kv9_A 487 DK 488 (668)
T ss_dssp TT
T ss_pred hc
Confidence 64
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=8e-08 Score=73.66 Aligned_cols=180 Identities=13% Similarity=0.032 Sum_probs=117.1
Q ss_pred CCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCC
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHR 99 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 99 (294)
++|. +..++.++.|..+|.. ++....+......+.++...+ ++.+++ ++ +.|..+| .+++....+. ...
T Consensus 146 ~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v-~t--~~l~~~d-~~g~~~~~~~---~~~ 214 (330)
T 3hxj_A 146 EDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYF-GS--DKVYAIN-PDGTEKWNFY---AGY 214 (330)
T ss_dssp TTSC--EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEE-ES--SSEEEEC-TTSCEEEEEC---CSS
T ss_pred CCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEE-Ee--CEEEEEC-CCCcEEEEEc---cCC
Confidence 5665 7778888999999988 777666665566677788876 565544 44 7789999 6777766665 244
Q ss_pred CceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee-cceE
Q 022590 100 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFI 178 (294)
Q Consensus 100 ~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l 178 (294)
..+.++...+ ++. +..++.++.+..+|.... ...........+..+..+ +..+
T Consensus 215 ~~~~~~~~~~-~g~-l~v~t~~~gl~~~~~~g~------------------------~~~~~~~~~~~~~~~~~~~~g~l 268 (330)
T 3hxj_A 215 WTVTRPAISE-DGT-IYVTSLDGHLYAINPDGT------------------------EKWRFKTGKRIESSPVIGNTDTI 268 (330)
T ss_dssp CCCSCCEECT-TSC-EEEEETTTEEEEECTTSC------------------------EEEEEECSSCCCSCCEECTTSCE
T ss_pred cceeceEECC-CCe-EEEEcCCCeEEEECCCCC------------------------EeEEeeCCCCccccceEcCCCeE
Confidence 5688888876 554 666777888888875331 111112222223334444 5678
Q ss_pred EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC
Q 022590 179 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 249 (294)
Q Consensus 179 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 249 (294)
..++.+|.|..+|. +++ ....+......+.++...+++ .|..++.+|.+++...+..+
T Consensus 269 ~v~t~~ggl~~~d~-~g~---------~~~~~~~~~~~~~~~~~d~~g---~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 269 YFGSYDGHLYAINP-DGT---------EKWNFETGSWIIATPVIDENG---TIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEECTTCEEEEECT-TSC---------EEEEEECSSCCCSCCEECTTC---CEEEECTTSCEEEEEC----
T ss_pred EEecCCCCEEEECC-CCc---------EEEEEEcCCccccceEEcCCC---EEEEEcCCCeEEEEeccccc
Confidence 88888989999996 433 233444445556666666666 47779999999988776543
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.95 E-value=1.1e-06 Score=67.14 Aligned_cols=240 Identities=12% Similarity=-0.002 Sum_probs=130.4
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc--------------------cCcceEEEEeCCCCCceEE
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG--------------------HGDSINEIRTQPLKPSLVV 70 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--------------------h~~~v~~~~~~~~~~~~l~ 70 (294)
-.+++|. ++|+ ++.++..++.|..|+..+++.. .+.. ....+..+++.+.+++ |+
T Consensus 21 p~~i~~d--~~g~-~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 21 PNSFTFD--STNK-GFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp CCCEECC--TTCS-SEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred ceEEEEc--CCCC-EEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EE
Confidence 3456775 7887 7888888999999998765432 2210 1135788999863444 44
Q ss_pred EeeCCCcEEEEEcCCCceEEEeec-cCC-CCCceeEEEEecCCCceEEeeec-----------------CCcEEEEeccc
Q 022590 71 SASKDESVRLWNVQTGICILIFAG-AGG-HRNEVLSVDFHPSDIYRIASCGM-----------------DNTVKIWSMKE 131 (294)
Q Consensus 71 s~~~dg~i~vwd~~~~~~~~~~~~-~~~-~~~~v~~l~~~~~~~~~l~~~~~-----------------dg~i~~wd~~~ 131 (294)
.+...+.|..+|..+++. ..+.. ..+ .......+++.+.++++.++-.. ++.|..+|...
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 454445588888765542 22221 001 11346788888723444443221 25566676654
Q ss_pred cccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEe-eCCCeEEEecCCCCCCCCCCCCceeee
Q 022590 132 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSK-SVDNEIVLWEPKMKEQSPGEGTADILQ 208 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~ 208 (294)
... ............++++ ++.|+.+ ...+.|..|++..... .....+.
T Consensus 175 ~~~------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~----~~~~~~~ 226 (322)
T 2fp8_A 175 KET------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK----GTAEVLV 226 (322)
T ss_dssp TEE------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT----TCEEEEE
T ss_pred CEE------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC----CccceEE
Confidence 210 0000011223445665 5555544 5568999999875321 0111222
Q ss_pred eeecCCCCeeEEEEcccCCcceEEEEcC----------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEE
Q 022590 209 KYPVPECDIWFIKFSCDFHYNAAAIGNR----------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTIL 278 (294)
Q Consensus 209 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 278 (294)
. . .. ...+++.+++. +.++... .+.|..+|.. ++...............++.+++ .++++.+
T Consensus 227 ~--~-~g-P~gi~~d~~G~--l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v 298 (322)
T 2fp8_A 227 K--I-PN-PGNIKRNADGH--FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYI 298 (322)
T ss_dssp E--C-SS-EEEEEECTTSC--EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEE
T ss_pred e--C-CC-CCCeEECCCCC--EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEE
Confidence 1 1 22 67789999884 4444333 4668888764 33222222211111234666776 4666666
Q ss_pred EeccCCcEEEEecC
Q 022590 279 SCCEDGAIWRWDAI 292 (294)
Q Consensus 279 s~~~dg~i~vw~~~ 292 (294)
+...++.|.++++.
T Consensus 299 ~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 299 GTLFHGSVGILVYD 312 (322)
T ss_dssp ECSSCSEEEEEEC-
T ss_pred eecCCCceEEEecc
Confidence 66678889998875
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.92 E-value=8.5e-06 Score=63.91 Aligned_cols=223 Identities=5% Similarity=-0.150 Sum_probs=131.3
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeE
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 104 (294)
+|+.+.. ..|+..++........+. ....+..++|.+.++.++++-...+.|..+++..+.....+. ........
T Consensus 89 ~l~~~~~-~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~---~~~~~p~g 163 (386)
T 3v65_B 89 VLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS---TGLESPGG 163 (386)
T ss_dssp EEEEECB-SCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC---SSCSCCCC
T ss_pred eeEeecC-ccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe---CCCCCccE
Confidence 4444443 568888887655444333 334578999998456666666677889999987665433333 12234678
Q ss_pred EEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cc-eEEEe
Q 022590 105 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSK 181 (294)
Q Consensus 105 l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~ 181 (294)
+++.+.++.++++-...+.|.+.++.... ..............++++ +. ++++-
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~-----------------------~~~l~~~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------RKVLLWQSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCS-----------------------CEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCc-----------------------eEEeecCCCCCCcEEEEEcCCCeEEEec
Confidence 88987566666766667788888776421 111111122334555554 33 34443
Q ss_pred eCC-CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccc
Q 022590 182 SVD-NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQ 260 (294)
Q Consensus 182 ~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 260 (294)
... +.|..+++..... .............++++|++. .+.++-...+.|..+|+.......... .
T Consensus 221 ~~~~~~I~r~~~dG~~~---------~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~----~ 286 (386)
T 3v65_B 221 WGNTPRIEASSMDGSGR---------RIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVIS----Q 286 (386)
T ss_dssp CSSSCEEEEEETTSCSC---------EEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEECTTSCSCEEEEC----S
T ss_pred cCCCCEEEEEeCCCCCc---------EEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEeCCCCeeEEEEE----C
Confidence 344 6788888764321 111112234577899998764 455555667889999987643222221 1
Q ss_pred cCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 261 SKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 261 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
.......+++ .++.++++-...+.|..++
T Consensus 287 ~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 287 GLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 1234577888 4455566666677787776
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.91 E-value=2e-05 Score=68.07 Aligned_cols=248 Identities=9% Similarity=0.050 Sum_probs=145.8
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-------cCcceEEEEeCCCCCceEEEeeCCCcEEE
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-------HGDSINEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
...|.++... ++|. |..|+.++-+..||..+++....... ....|.++...+ ++.+.+ |+.+| |.+
T Consensus 214 ~~~i~~i~~d--~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~G-l~~ 286 (795)
T 4a2l_A 214 TKQIQAILQQ--SPTR--IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWI-GTFND-LNI 286 (795)
T ss_dssp CCCEEEEEEE--ETTE--EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEE-EESSC-EEE
T ss_pred CCeeEEEEEc--CCCC--EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEE-EeCCh-hhe
Confidence 3456676664 6675 55555554588899876543322111 235699999887 665444 45554 888
Q ss_pred EEcCCCceEEEeecc----CCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeee
Q 022590 81 WNVQTGICILIFAGA----GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 156 (294)
Q Consensus 81 wd~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
||..+++........ .-....|.++...+ ++. |-.|+.++-|..++........ +. ..+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~~---~~--~~~---------- 349 (795)
T 4a2l_A 287 YHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGG-MWLGTYFGGLNYYHPIRNRFKN---IR--NIP---------- 349 (795)
T ss_dssp EETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSC-EEEEESSSCEEEECGGGGSSEE---EC--CCT----------
T ss_pred EcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcC-EEEEECCCCeEEeCCCcccceE---Ec--CCC----------
Confidence 998776544322110 01235699999987 665 6667777789999876521100 00 000
Q ss_pred ceEEeecCCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee------ecCCCCeeEEEEcccCCcc
Q 022590 157 PVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------PVPECDIWFIKFSCDFHYN 229 (294)
Q Consensus 157 ~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~ 229 (294)
. ........|.++..+ ...|..|+.++.|..||..++.. ...... ......|.++...+++ .
T Consensus 350 -~-~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~ 418 (795)
T 4a2l_A 350 -Y-KNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRF-------TSYTLQEDESARGIGSNNIKAVYVDEKK--S 418 (795)
T ss_dssp -T-SSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCE-------EEECCC------CCSCSCEEEEEEETTT--T
T ss_pred -C-CCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcE-------EEEecCCCCcccCCCCccEEEEEEcCCC--C
Confidence 0 001123457777666 44677788888899999876531 011000 1123567788777666 4
Q ss_pred eEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 230 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.|..|+.++-|..||..+++...............|.++...++|++.+... +| |.+||.+
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~ 479 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVRFNPE 479 (795)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEEEETT
T ss_pred EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCC
Confidence 3677777778999998877532221111112235799999999888666554 54 7778764
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.91 E-value=2.2e-06 Score=72.13 Aligned_cols=108 Identities=14% Similarity=0.069 Sum_probs=68.2
Q ss_pred C-CCceEEEEeecCC-----------eEEEEEcCCccccc--eec-ccCcceEEEEeCCCCCceEEEeeC-CCcEEEEEc
Q 022590 20 V-DGIPFLVAGGING-----------IIRVIDVSNEKLHK--SFV-GHGDSINEIRTQPLKPSLVVSASK-DESVRLWNV 83 (294)
Q Consensus 20 ~-~~~~~l~~~~~dg-----------~i~iw~~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~ 83 (294)
+ +|+ +++.|+.+. .+.+||..+++... .+. .+.....++++.+ ++.+++.|+. +..+.+||.
T Consensus 195 ~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~~yd~ 272 (656)
T 1k3i_A 195 PTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTSLYDS 272 (656)
T ss_dssp TTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEEEEEG
T ss_pred ecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceEEecC
Confidence 6 777 788876543 68899998876432 221 1233344567777 7888888884 568999999
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeee-cC-----CcEEEEecccc
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MD-----NTVKIWSMKEF 132 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~-~d-----g~i~~wd~~~~ 132 (294)
.+++-... ..+. ....-.+++..+ ++.+++.|+ .+ ..+.+||..+.
T Consensus 273 ~t~~W~~~-~~~~-~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 273 SSDSWIPG-PDMQ-VARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp GGTEEEEC-CCCS-SCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cCCceeEC-CCCC-ccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCC
Confidence 87654332 2111 111123455556 778888888 34 56899998763
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.88 E-value=1.6e-06 Score=71.54 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=45.9
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccC--c--ceEE-EEeCCCCCceEEEeeC------CCcEEEEEcCCCceEEEee
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHG--D--SINE-IRTQPLKPSLVVSASK------DESVRLWNVQTGICILIFA 93 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~--~--~v~~-~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~ 93 (294)
.++.++.|+.|..+|..+++.+....... . .+.+ -... ++ .++.++. ++.|..+|..+|+.+..+.
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE--CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 68888889999999999998876654221 0 1211 1111 33 4455544 7999999999999988776
Q ss_pred c
Q 022590 94 G 94 (294)
Q Consensus 94 ~ 94 (294)
.
T Consensus 194 ~ 194 (571)
T 2ad6_A 194 A 194 (571)
T ss_dssp S
T ss_pred c
Confidence 3
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.87 E-value=6.9e-06 Score=59.87 Aligned_cols=220 Identities=11% Similarity=0.076 Sum_probs=134.0
Q ss_pred eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEE
Q 022590 48 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 127 (294)
Q Consensus 48 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~w 127 (294)
.+.+-.+.+..++|.|+++.++++...++.|...|.. ++.+..+.. +-....-.|++.+ ++.++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l--~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL--DFVKDLETIEYIG-DNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC--SSCSSEEEEEECS-TTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec--CCCCChHHeEEeC-CCEEEEEECCCCcEEEE
Confidence 3445556799999999555566667888999999997 888877753 1224678899987 77766766677889998
Q ss_pred eccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCce
Q 022590 128 SMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205 (294)
Q Consensus 128 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 205 (294)
++........ ... ...+. ...........++|+ ++.|+++.......+|.++.... .....
T Consensus 97 ~v~~~~~i~~--~~~-----------~~~~~-~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~---~~~l~ 159 (255)
T 3qqz_A 97 SLTPNSEVKI--LKK-----------IKIPL-QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS---SNELH 159 (255)
T ss_dssp EECTTCCEEE--EEE-----------EECCC-SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC---SSCCE
T ss_pred EcCCCCeeee--eee-----------ecccc-ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc---CCcee
Confidence 8876321000 000 00000 011234556788887 54666666655555555541100 00111
Q ss_pred eeee----eecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecccccc-----CCCeEEEEEccCCCE
Q 022590 206 ILQK----YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS-----KSPIRQTAMSYDGST 276 (294)
Q Consensus 206 ~~~~----~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~ 276 (294)
.... -......+..+++.|... .+++.......+..+|.+.. .+....+....+ ...-..|+|.++|++
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg-~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l 237 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKN-TLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI 237 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTT-EEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCE
T ss_pred eecchhhccccccCCceeEEEcCCCC-eEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCE
Confidence 1110 011234577899999875 67788888899999997754 444444442111 236789999999985
Q ss_pred EEEeccCCcEEEEec
Q 022590 277 ILSCCEDGAIWRWDA 291 (294)
Q Consensus 277 l~s~~~dg~i~vw~~ 291 (294)
.++ ++-+.++++.-
T Consensus 238 yIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 238 YIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEE-ETTTEEEEEEC
T ss_pred EEE-cCCceEEEEEe
Confidence 555 67676666643
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.86 E-value=1.1e-05 Score=69.57 Aligned_cols=248 Identities=10% Similarity=0.037 Sum_probs=143.0
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee-cccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF-VGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
|.++... ++|. |..|+.++-|..|+..+++..... ..+...|.++...+ ++.+.+ |+.++-+..||..+++..
T Consensus 175 i~~i~~d--~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lwi-gt~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYR--QGDQ--IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQS-PTRIWV-ATEGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEE--ETTE--EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEE-TTEEEE-EEBSSCEEEEETTTTEEE
T ss_pred eEEEEEC--CCCC--EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcC-CCCEEE-EECCCCeEEEeCCCCeEE
Confidence 6776665 6675 555666555888998766543221 12346788888877 565554 444434888998776543
Q ss_pred EEeecc----CCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 90 LIFAGA----GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 90 ~~~~~~----~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
...... .-....|.++...+ ++. |..|+.+ -|.+||........ + ...+ ........
T Consensus 249 ~~~~~~~~~~~l~~~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~---~--~~~~-----------~~~~~l~~ 309 (795)
T 4a2l_A 249 NYLHSPSNPKSISSNYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFAS---Y--SSNP-----------VENGSLSQ 309 (795)
T ss_dssp EECCCTTCTTSCSCSBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEE---E--CCCT-----------TSTTSCSS
T ss_pred EeecCCCCccccCCCeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEE---E--ecCC-----------CCCCCCCC
Confidence 322110 01235699999887 665 4455555 58888876521100 0 0000 00001123
Q ss_pred Cceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeee----eecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 166 NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK----YPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 166 ~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
..|.++..+ ...+..|+.++.|..|+....... .... .......|.++...+++ .|-.|+.++-|
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-------~~~~~~~~~~l~~~~V~~i~~d~~g---~lWiGt~~~Gl 379 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK-------NIRNIPYKNSLSDNVVSCIVEDKDK---NLWIGTNDGGL 379 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE-------EECCCTTSSSCSCSSEEEEEECTTS---CEEEEESSSCE
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce-------EEcCCCCCCCCCCCeeEEEEECCCC---CEEEEECCCCe
Confidence 457777766 456777788888999987654310 1110 01123568888877776 36667777779
Q ss_pred EEEeccCCCceeeeecc-c---cccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLS-H---AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~-~---~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
..|+..+.+........ . ......|.+++..++|+.|..|+.++-|..||.++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 380 NLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp EEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred EEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 99998776422211100 0 11235799999999988455666666688887653
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.84 E-value=1.3e-05 Score=61.08 Aligned_cols=226 Identities=7% Similarity=-0.108 Sum_probs=130.1
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC---ceEEEeeccCCCCCc
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG---ICILIFAGAGGHRNE 101 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~ 101 (294)
+|+.+.. ..|+..++.+.+....+. ....+..++|++.++.++++-...+.|..+++... .....+.. ..-..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--RDIQA 78 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC--SSCSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe--CCCCC
Confidence 4444444 468999998776555444 34567899999845556666666789999998751 22222221 12235
Q ss_pred eeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEE
Q 022590 102 VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFIL 179 (294)
Q Consensus 102 v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~ 179 (294)
...+++.+.+++++++-...+.|.+.++.... ..............++.+ +..|+
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-----------------------~~~~~~~~~~~P~~iavdp~~g~ly 135 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------RKTLFRENGSKPRAIVVDPVHGFMY 135 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSS-----------------------EEEEEECTTCCEEEEEEETTTTEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-----------------------eEEEEECCCCCcceEEeCCCCCEEE
Confidence 67899987466666666778899999876521 011111112234455554 34443
Q ss_pred Eee-CC-CeEEEecCCCCCCCCCCCCceeeeee-ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeec
Q 022590 180 SKS-VD-NEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 256 (294)
Q Consensus 180 ~~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 256 (294)
.+. .. +.|...++.... ...+ ...-.....+++++++. .+.++-...+.|..+|+...........
T Consensus 136 ~~d~~~~~~I~~~~~dG~~----------~~~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d~dg~~~~~~~~~ 204 (316)
T 1ijq_A 136 WTDWGTPAKIKKGGLNGVD----------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILED 204 (316)
T ss_dssp EEECSSSCEEEEEETTSCC----------EEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEEC
T ss_pred EEccCCCCeEEEEcCCCCC----------eEEEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEecCCCceEEEeec
Confidence 333 33 678888775321 1111 12234577899998764 4455556678999999976543222221
Q ss_pred cccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 257 SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
. ........+++. .+.++++-...+.|..++.
T Consensus 205 ~--~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 205 E--KRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp T--TTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred C--CccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 1 112335677875 4555566666778887775
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.78 E-value=2.5e-05 Score=60.35 Aligned_cols=223 Identities=6% Similarity=-0.139 Sum_probs=130.8
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeE
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 104 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 104 (294)
+|+.+.. ..|+..+++.......+. ....+..++|++.++.++++-...+.|..+++..+.....+. ........
T Consensus 46 ~ll~~~~-~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~---~~~~~p~g 120 (349)
T 3v64_C 46 VLLFANR-IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS---TGLESPGG 120 (349)
T ss_dssp EEEEECB-SCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---SSCSCCCE
T ss_pred eeEeecc-cceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe---CCCCCccE
Confidence 4444433 458888876554433333 334578999998456666666677889999987665443333 12345678
Q ss_pred EEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEe
Q 022590 105 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSK 181 (294)
Q Consensus 105 l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~ 181 (294)
+++.+.++.++++-...+.|.+.++.... ..............++++ +.++++-
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------~~~l~~~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------RKVLLWQSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------CEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCc-----------------------eEEEEeCCCCCcceEEEecCcCeEEEec
Confidence 99987566766776777889999887521 111111122334555555 3344444
Q ss_pred eCC-CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccc
Q 022590 182 SVD-NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQ 260 (294)
Q Consensus 182 ~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 260 (294)
... +.|..+++..... .............++++|++. .+.++-...+.|..+++.......... .
T Consensus 178 ~~~~~~I~r~~~dG~~~---------~~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~~dG~~~~~~~~----~ 243 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGR---------RIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERANLDGSHRKAVIS----Q 243 (349)
T ss_dssp CSSSCEEEEEETTSCSC---------EESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEC----S
T ss_pred cCCCCEEEEEeCCCCCc---------EEEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEeCCCCceEEEEe----C
Confidence 444 7788888764321 111111234567899998764 445555667889999987653222221 1
Q ss_pred cCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 261 SKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 261 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
.......+++ .++.+.++-...+.|...+
T Consensus 244 ~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 244 GLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 1234567777 3455555555667777766
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.77 E-value=9.6e-06 Score=69.38 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=68.1
Q ss_pred EEEeec-CCCceEEEEeec-CC----eEEEEEcCCc-cccc-eecccCcceEEEEeCCCCCceEEEeeCC-----CcEEE
Q 022590 14 VSWACN-VDGIPFLVAGGI-NG----IIRVIDVSNE-KLHK-SFVGHGDSINEIRTQPLKPSLVVSASKD-----ESVRL 80 (294)
Q Consensus 14 ~~~~~~-~~~~~~l~~~~~-dg----~i~iw~~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~v 80 (294)
-.+.++ |||+ +||.+.. +| .|+++|+.++ +.+. .+. .....++|+| +++.|+....| ..|..
T Consensus 177 ~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 177 MEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCCEEEEEE
T ss_pred eeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCCCCEEEE
Confidence 345568 8998 6664433 33 5999999988 6322 121 2245789999 76666655554 25778
Q ss_pred EEcCCCce--EEEeeccCCCCCceeEEEEecCCCceEEeeec---CCcEEEEeccc
Q 022590 81 WNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM---DNTVKIWSMKE 131 (294)
Q Consensus 81 wd~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~---dg~i~~wd~~~ 131 (294)
+++.+++. ...+.. ........+.|+| ++.+|+..+. ...|.++|+..
T Consensus 252 ~~lgt~~~~~~lv~~~--~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEE--HNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EETTSCGGGCEEEEEC--CCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSS
T ss_pred EECCCCchhcEEEEec--CCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCC
Confidence 88877642 233331 1233466889999 7776665542 34577778765
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=3.8e-06 Score=69.45 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=45.3
Q ss_pred EEEeecCCeEEEEEcCCccccceecccCc----ceEE-EEeCCCCCceEEEee------CCCcEEEEEcCCCceEEEeec
Q 022590 26 LVAGGINGIIRVIDVSNEKLHKSFVGHGD----SINE-IRTQPLKPSLVVSAS------KDESVRLWNVQTGICILIFAG 94 (294)
Q Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~h~~----~v~~-~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~ 94 (294)
|+.++.|+.|..+|..+|+.+........ .+++ -... ++ .++.++ .+|.|.-+|..+|+.+..+..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 88888999999999999988766543210 1211 1111 33 444444 389999999999999887764
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=4.6e-05 Score=65.61 Aligned_cols=242 Identities=10% Similarity=-0.028 Sum_probs=139.9
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec----------ccCcceEEEEeCCCCCceEEEeeCCCc
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV----------GHGDSINEIRTQPLKPSLVVSASKDES 77 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~l~s~~~dg~ 77 (294)
...|.++... ++|. |-.|+.++-|..++..+..... +. .....|.++...+ ++. |..|+.++-
T Consensus 312 ~~~v~~i~~D--~~g~--lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~~~G 384 (781)
T 3v9f_A 312 NASARYIFQD--SFNN--IWIGTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDG-QGK-LWIGTDGGG 384 (781)
T ss_dssp SSCEEEEEEC--SSCC--EEEEEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECT-TSC-EEEEEBSSC
T ss_pred CCeEEEEEEe--CCCC--EEEEecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcC-CCC-EEEEeCCCc
Confidence 3567777765 7776 7777777778888876554321 21 1235689998877 555 455665566
Q ss_pred EEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeec
Q 022590 78 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 157 (294)
Q Consensus 78 i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
|..++..++...............|.++...+ ++. |..|+.++-+..+|..+.....
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~--------------------- 441 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGTYLGNISYYNTRLKKFQI--------------------- 441 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEETTEEEEEECSSSCEEEE---------------------
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEeccCCEEEEcCCCCcEEE---------------------
Confidence 88888865433221110012346789998876 555 5557766778888876521100
Q ss_pred eEEeecCCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee---cCCCCeeEEEEcccCCcceEEE
Q 022590 158 VFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP---VPECDIWFIKFSCDFHYNAAAI 233 (294)
Q Consensus 158 ~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~l~~ 233 (294)
..........|.++..+ ...|..|+. +.|..||..+++.. ...... .....+.++...+++ .|..
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~i~~d~~g---~lWi 510 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVI-------HHYDTSNSQLLENFVRSIAQDSEG---RFWI 510 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCC-------EEECTTTSSCSCSCEEEEEECTTC---CEEE
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEE-------ecccCcccccccceeEEEEEcCCC---CEEE
Confidence 00001123456666665 445666666 66889998765421 111000 113567888877776 3455
Q ss_pred EcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 234 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 234 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
|+..+-+..||..+.+.... ..........|.++...++|.+.++.. +|.|..||.+
T Consensus 511 gt~~~Gl~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 511 GTFGGGVGIYTPDMQLVRKF-NQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSAR 567 (781)
T ss_dssp EESSSCEEEECTTCCEEEEE-CTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTT
T ss_pred EEcCCCEEEEeCCCCeEEEc-cCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCC
Confidence 55544477788776532111 111112245789999999998766554 6654777754
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=4.5e-05 Score=59.81 Aligned_cols=200 Identities=8% Similarity=-0.071 Sum_probs=118.7
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
....++|. +.+..++++-...+.|+.++++.......+.........+++.+.++.++++-...+.|.+.++......
T Consensus 117 ~~~gl~~d--~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 117 NAIALDFH--HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CEEEEEEE--TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred ccEEEEEe--cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 45667776 5444356666677889999987655433333233455778888745666666666788998888654433
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEeeecC-CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
..+. ..-.....|++.|.++.++++-... +.|..+++.... ........-...
T Consensus 195 ~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-----------------------~~~~~~~~~~~P 248 (386)
T 3v65_B 195 VLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-----------------------RRIIADTHLFWP 248 (386)
T ss_dssp EEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSCE
T ss_pred Eeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-----------------------cEEEEECCCCCe
Confidence 3333 2335679999998566655555444 678877776411 111111122334
Q ss_pred eeccee--c-ceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 169 DCNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 169 ~~~~~~--~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
..++++ + .+.++-...+.|..+|+..... .............+++. .+ .++.+-...+.|..++.
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~---------~~~~~~~~~~P~giav~-~~--~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHR---------KAVISQGLPHPFAITVF-ED--SLYWTDWHTKSINSANK 316 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSCSC---------EEEECSSCSSEEEEEEE-TT--EEEEEETTTTEEEEEET
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCCee---------EEEEECCCCCceEEEEE-CC--EEEEeeCCCCeEEEEEC
Confidence 567775 3 4445555677899999864321 11112223456677773 33 46666677888988885
Q ss_pred cCCC
Q 022590 246 QSSP 249 (294)
Q Consensus 246 ~~~~ 249 (294)
.+++
T Consensus 317 ~~G~ 320 (386)
T 3v65_B 317 FTGK 320 (386)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 5554
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=5.9e-05 Score=60.00 Aligned_cols=248 Identities=10% Similarity=-0.011 Sum_probs=129.7
Q ss_pred eeEEEEEeecC-CCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeC-CC----cEEEEEc
Q 022590 10 SFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK-DE----SVRLWNV 83 (294)
Q Consensus 10 ~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-dg----~i~vwd~ 83 (294)
.-..++++ | ++. .|..+...+.|+.+|+++++..... ........|+|++ +++.|+.+.. ++ .+.+.+.
T Consensus 138 ~P~~lavd--p~~~g-~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFD--PKNHN-HLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEE--TTEEE-EEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEEC--CCCCC-eEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC
Confidence 34567776 6 344 4555555588999998776544333 3445688999999 7774554443 22 2333333
Q ss_pred CCCceE--EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 84 QTGICI--LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 84 ~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
.+... ..+. .......++++|.++.++++-..++.|..++....... .+...
T Consensus 213 -~g~~~~~~~l~----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~---------------------~~~~~ 266 (430)
T 3tc9_A 213 -ESGFKVITELT----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT---------------------PLFTI 266 (430)
T ss_dssp -GGTSCSEEEEE----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE---------------------EEEEC
T ss_pred -CCceeeeeeec----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE---------------------EEEEc
Confidence 33222 2222 12335778899866676666667788999998752110 01111
Q ss_pred ecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee------------ecCCCCee-EEEEcc-
Q 022590 162 SVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------------PVPECDIW-FIKFSC- 224 (294)
Q Consensus 162 ~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------~~~~~~i~-~~~~~~- 224 (294)
........++++ ++ ++++-...+.|..++......... ....+... ...-.... .++..+
T Consensus 267 -~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~ 343 (430)
T 3tc9_A 267 -QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLT--TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNP 343 (430)
T ss_dssp -SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC--CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECG
T ss_pred -CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccccc--ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccc
Confidence 111234456665 66 444555678899887653210000 00000000 00001122 344432
Q ss_pred -----cCCcceEEEEcCCCeEEEEeccCCCceeeeec-----c--------ccccCCCeEEEEEccC-CCEEEEeccCCc
Q 022590 225 -----DFHYNAAAIGNREGKIFVWELQSSPPVLIARL-----S--------HAQSKSPIRQTAMSYD-GSTILSCCEDGA 285 (294)
Q Consensus 225 -----~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~--------~~~~~~~v~~~~~s~~-~~~l~s~~~dg~ 285 (294)
+..+.+.++-...+.|+.++. .++.....-. . ....-.....++++|+ +.++++-..+..
T Consensus 344 ~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 422 (430)
T 3tc9_A 344 AYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRR 422 (430)
T ss_dssp GGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred cccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe
Confidence 122245555556778888873 3321111110 0 0001125789999994 666666667788
Q ss_pred EEEEecC
Q 022590 286 IWRWDAI 292 (294)
Q Consensus 286 i~vw~~~ 292 (294)
|+.++++
T Consensus 423 Ir~i~~e 429 (430)
T 3tc9_A 423 IRKIGYE 429 (430)
T ss_dssp EEEEEEC
T ss_pred EEEEccC
Confidence 9888765
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.67 E-value=3.5e-05 Score=56.19 Aligned_cols=208 Identities=5% Similarity=0.045 Sum_probs=126.1
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-cCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
-.+.+..++|. |++..++++...++.|...|.. ++..+.+.- -....-.|++.+ ++.++++.-.++.+.++++..
T Consensus 25 ~~~~lSGla~~--~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 25 ITNNISSLTWS--AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CCSCEEEEEEE--TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECT
T ss_pred cccCcceeEEe--CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCC
Confidence 34579999998 7665477778889999999987 777776642 124577888888 777767766778899998865
Q ss_pred Cce---EEEeec---cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 86 GIC---ILIFAG---AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 86 ~~~---~~~~~~---~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
... +..... ..........|+|+| .++.|.++.......+|.++..... ..+.. ...+..
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~--~~l~i-----------~~~~~~ 166 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSS--NELHI-----------SKDKAL 166 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCS--SCCEE-----------EECHHH
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccC--Cceee-----------ecchhh
Confidence 542 222221 012345679999999 5555655655555566665521000 00000 000000
Q ss_pred EeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCC---------CCeeEEEEcccCC
Q 022590 160 IASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE---------CDIWFIKFSCDFH 227 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~~~~~~ 227 (294)
....+...+.+++++ +.+++.....+.+..+|.... .+..+.... .....++|.++|.
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----------EEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----------EEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 001122345677776 667777788888999997643 233333321 3567899999983
Q ss_pred cceEEEEcCCCeEEEEec
Q 022590 228 YNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 228 ~~~l~~~~~dg~i~i~d~ 245 (294)
|+..++.+.++.|.-
T Consensus 237 ---lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 237 ---IYIVSEPNRFYRFTP 251 (255)
T ss_dssp ---EEEEETTTEEEEEEC
T ss_pred ---EEEEcCCceEEEEEe
Confidence 444567776666643
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.63 E-value=2.8e-06 Score=71.56 Aligned_cols=226 Identities=8% Similarity=-0.074 Sum_probs=117.2
Q ss_pred CCCceEEEEee-cCCeEEEEEcCCccccceecccCc-ceEEEEeCCCCCceEEEee-CC-----CcEEEEEcCCCceEEE
Q 022590 20 VDGIPFLVAGG-INGIIRVIDVSNEKLHKSFVGHGD-SINEIRTQPLKPSLVVSAS-KD-----ESVRLWNVQTGICILI 91 (294)
Q Consensus 20 ~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~-~d-----g~i~vwd~~~~~~~~~ 91 (294)
++|+ +++.|+ .+..+.+||..+++-...-..+.. .-.+++..+ ++++++.|+ .+ ..+.+||..+++-...
T Consensus 252 ~~g~-lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 252 GNGQ-IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TTSC-EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCC-EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 7888 888887 456899999877643222111111 123455556 778888888 44 5689999987653332
Q ss_pred e----eccCCCCCceeEEEEecCCCceEEeeecCC---------cEEEEeccccccccccceeecCCCCCCCCceeeece
Q 022590 92 F----AGAGGHRNEVLSVDFHPSDIYRIASCGMDN---------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 92 ~----~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg---------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
- .... .... ...+.. ++..++.|+.+| .+..||....... .+.
T Consensus 330 ~~~~~~p~~-~~~~--~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~--------------------~~~ 385 (656)
T 1k3i_A 330 PNAKVNPML-TADK--QGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV--------------------KSA 385 (656)
T ss_dssp TTSCSGGGC-CCCT--TGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE--------------------EEE
T ss_pred CCccccccc-cccc--cceeec-CCceEEEECCCCcEEEecCccceeeeecCCccee--------------------ecC
Confidence 0 0000 0000 011122 445555555554 4566776652110 000
Q ss_pred EEeec------CCCceeecc---eecceEEEeeCCC-----------eEEEecCCCCCCCCCCCCceeeeeeecCCCC-e
Q 022590 159 FIASV------HSNYVDCNR---WLGDFILSKSVDN-----------EIVLWEPKMKEQSPGEGTADILQKYPVPECD-I 217 (294)
Q Consensus 159 ~~~~~------~~~~i~~~~---~~~~~l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-i 217 (294)
..... ....-.++. ..+.+++.|+.++ .+.+||..+..- ..+..-..+... -
T Consensus 386 ~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W-------~~~~~~~mp~~R~~ 458 (656)
T 1k3i_A 386 GKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN-------TVFASNGLYFARTF 458 (656)
T ss_dssp EECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE-------EEECTTCCSSCCBS
T ss_pred CccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe-------eEEccCCCCCCccc
Confidence 00000 011112222 2377778877532 678888876431 111100111222 2
Q ss_pred eEEEEcccCCcceEEEEcCC-----------CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEecc
Q 022590 218 WFIKFSCDFHYNAAAIGNRE-----------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
..+...|++ .+++.|+.+ ..+.+||..+.+........ ..+..-....+.|+|++++.|+.
T Consensus 459 ~~~~~l~~g--~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~--~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 459 HTSVVLPDG--STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS--IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEECTTS--CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS--SCCCTTEEEEECTTSCEEEEECC
T ss_pred CCeEECCCC--CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC--CccccccHhhcCCCcEEEecCCC
Confidence 344566777 577777754 56899999886533322222 22223345566799999999885
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.63 E-value=6.6e-05 Score=56.87 Aligned_cols=203 Identities=8% Similarity=-0.048 Sum_probs=110.1
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC--cEEEEeccc
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--TVKIWSMKE 131 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg--~i~~wd~~~ 131 (294)
.....++|++ +++++++-..++.|..||... +....+. ....+..+++.+ +++++++..... .|..+|..+
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~~----~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHAT----VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEEE----CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEEe----CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence 4567899999 777777776789999999864 4443333 345789999999 777555543322 355566554
Q ss_pred cccccccceeecCCCCCCCCceeeeceEEeecCCCceeecc-eecc-eEEEeeCCCeEEEecCCCCCCCCC--CCCceee
Q 022590 132 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNR-WLGD-FILSKSVDNEIVLWEPKMKEQSPG--EGTADIL 207 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~-~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~ 207 (294)
+.... +.... .......+. +.+. .+++-..++.|..+|...+..... ......
T Consensus 105 g~~~~---------------------~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~- 161 (306)
T 2p4o_A 105 GTVET---------------------LLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR- 161 (306)
T ss_dssp SCEEE---------------------EEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC-
T ss_pred CeEEE---------------------EEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc-
Confidence 22100 00000 000111111 2233 344444578888888764310000 000000
Q ss_pred eeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC-CCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcE
Q 022590 208 QKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS-SPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286 (294)
Q Consensus 208 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 286 (294)
......-.....+ +++++ .++++-...+.|..|++.. ++......+. .......++++++|++.++....+.|
T Consensus 162 ~~~~~~~~~pngi--s~dg~-~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~---~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 162 SNSESVFPAANGL--KRFGN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIFV---EQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp SSTTCCSCSEEEE--EEETT-EEEEEETTTTEEEEEEBCTTSCBCCCEEEE---ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred ccccCCCCcCCCc--CcCCC-EEEEEeCCCCEEEEEEeCCCCCCCccEEEe---ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 0000011233445 77774 3556666788999999875 3211111111 01235678999999887777777888
Q ss_pred EEEecC
Q 022590 287 WRWDAI 292 (294)
Q Consensus 287 ~vw~~~ 292 (294)
.+++..
T Consensus 236 ~~~~~~ 241 (306)
T 2p4o_A 236 VRIAPD 241 (306)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 888753
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.62 E-value=7.9e-05 Score=57.54 Aligned_cols=199 Identities=8% Similarity=-0.071 Sum_probs=117.8
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEE
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICIL 90 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 90 (294)
...++|. +.+..++.+-...+.|..++++.......+.........+++.+.++.++++-...+.|.+.++.......
T Consensus 75 ~~~l~~d--~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 75 AIALDFH--HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp EEEEEEE--TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred eEEEEEe--ccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 4677776 55442555656778899999876554333332334567888887456666666677899999986544333
Q ss_pred EeeccCCCCCceeEEEEecCCCceEEeeecC-CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 91 IFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 91 ~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
.+. ..-.....|+++|.++.++++-... +.|...++..... .......-....
T Consensus 153 l~~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-----------------------~~~~~~~~~~Pn 206 (349)
T 3v64_C 153 LLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-----------------------RIIADTHLFWPN 206 (349)
T ss_dssp EEC---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----------------------EESCCSSCSCEE
T ss_pred EEe---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-----------------------EEEEECCCCCcc
Confidence 332 2335679999999566666665555 7788887764110 001111123345
Q ss_pred eccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEecc
Q 022590 170 CNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 246 (294)
Q Consensus 170 ~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 246 (294)
.++++ +. +.++-...+.|..+|+..... .............+++. .+ .+..+-...+.|..++..
T Consensus 207 Gla~d~~~~~lY~aD~~~~~I~~~~~dG~~~---------~~~~~~~~~~P~giav~-~~--~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 207 GLTIDYAGRRMYWVDAKHHVIERANLDGSHR---------KAVISQGLPHPFAITVF-ED--SLYWTDWHTKSINSANKF 274 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC---------EEEECSSCSSEEEEEEE-TT--EEEEEETTTTEEEEEETT
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCCCce---------EEEEeCCCCCceEEEEE-CC--EEEEecCCCCeEEEEEcc
Confidence 66665 34 444445567899999864321 11112223456677773 33 456666677888888854
Q ss_pred CCC
Q 022590 247 SSP 249 (294)
Q Consensus 247 ~~~ 249 (294)
+++
T Consensus 275 ~G~ 277 (349)
T 3v64_C 275 TGK 277 (349)
T ss_dssp TCC
T ss_pred CCC
Confidence 443
No 268
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=4.1e-05 Score=64.52 Aligned_cols=108 Identities=12% Similarity=0.112 Sum_probs=72.6
Q ss_pred EEEEeec------CCeEEEEEcCCccccceeccc-------------------------------CcceEEEEeCCCCCc
Q 022590 25 FLVAGGI------NGIIRVIDVSNEKLHKSFVGH-------------------------------GDSINEIRTQPLKPS 67 (294)
Q Consensus 25 ~l~~~~~------dg~i~iw~~~~~~~~~~~~~h-------------------------------~~~v~~~~~~~~~~~ 67 (294)
.++++.. +|.|..+|..+++.+.++... ......+++.| ...
T Consensus 164 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~ 242 (668)
T 1kv9_A 164 KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELD 242 (668)
T ss_dssp EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTT
T ss_pred EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCC
Confidence 4555543 589999999999887766421 01112467777 666
Q ss_pred eEEEeeCCC-------------------cEEEEEcCCCceEEEeeccCCCC-------CceeEEEEecCCCc---eEEee
Q 022590 68 LVVSASKDE-------------------SVRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDIY---RIASC 118 (294)
Q Consensus 68 ~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~~---~l~~~ 118 (294)
+++.++.++ .|..+|..+|+.+..++.. .|. .+.....+.. ++. .++.+
T Consensus 243 ~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~-~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~ 320 (668)
T 1kv9_A 243 LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT-PGDSWDFTATQQITLAELNI-DGKPRKVLMQA 320 (668)
T ss_dssp EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEEC
T ss_pred EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC-CCccccccCCCCcEEEEecc-CCcEEEEEEEE
Confidence 777777665 3999999999998887742 122 2222223333 443 68899
Q ss_pred ecCCcEEEEeccccccc
Q 022590 119 GMDNTVKIWSMKEFWTY 135 (294)
Q Consensus 119 ~~dg~i~~wd~~~~~~~ 135 (294)
+.+|.++++|..+++..
T Consensus 321 ~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 321 PKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEe
Confidence 99999999999886654
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.61 E-value=0.0001 Score=58.05 Aligned_cols=226 Identities=7% Similarity=-0.102 Sum_probs=130.8
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC----ceEEEeeccCCCCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG----ICILIFAGAGGHRN 100 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~ 100 (294)
+|+.+. ...|+..+++.......+. ....+..|+|++.++.++++-...+.|..+++... .....+. ....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---SSCS
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---CCCC
Confidence 455444 4689999987665444333 45678899999855556666566788988888652 2222222 2334
Q ss_pred ceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceE
Q 022590 101 EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI 178 (294)
Q Consensus 101 ~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l 178 (294)
....|++.+.+++++++-...+.|.+.++.... ..............++.+ +..|
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-----------------------~~~l~~~~~~~P~~iavdp~~g~l 216 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------RKTLFRENGSKPRAIVVDPVHGFM 216 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-----------------------EEEEEECSSCCEEEEEEETTTTEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCc-----------------------eEEEEeCCCCCcceEEEecccCeE
Confidence 678899987566666666777889988887521 111111122334555554 3344
Q ss_pred EEee--CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeec
Q 022590 179 LSKS--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 256 (294)
Q Consensus 179 ~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 256 (294)
+... ..+.|...++..... .......-.....+++++++. .+.++-...+.|..+|+...........
T Consensus 217 y~td~~~~~~I~~~~~dG~~~---------~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~~ 286 (400)
T 3p5b_L 217 YWTDWGTPAKIKKGGLNGVDI---------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILED 286 (400)
T ss_dssp EEEECSSSCCEEEEETTSCSC---------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCCCEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCCcc---------EEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEeCCCCccEEEEeC
Confidence 4333 236788888764321 111122234678899998774 3444455678899999976543333221
Q ss_pred cccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 257 SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
. ........+++. .+.++.+-...+.|..+|.
T Consensus 287 ~--~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 287 E--KRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp S--STTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred C--CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 1 112334567763 3445556566677877763
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.60 E-value=0.00012 Score=60.42 Aligned_cols=82 Identities=9% Similarity=0.045 Sum_probs=48.3
Q ss_pred CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccC
Q 022590 183 VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSK 262 (294)
Q Consensus 183 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 262 (294)
.++.|..||+.+++. +-+.+... .+....+...+ ..++.++.||.++.+|.++++.+...........
T Consensus 442 ~~g~l~a~D~~tG~~---------~W~~~~~~-~~~~~~~~t~g--g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 509 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKA---------KWTKWEKF-AAWGGTLYTKG--GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIG 509 (571)
T ss_dssp CCEEEEEECTTTCCE---------EEEEEESS-CCCSBCEEETT--TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCCeEEEEECCCCCE---------EEEecCCC-CccceeEEECC--CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEe
Confidence 357899999987762 22222211 12222222233 3677799999999999999987666555432223
Q ss_pred CCeEEEEEccCCCEEEE
Q 022590 263 SPIRQTAMSYDGSTILS 279 (294)
Q Consensus 263 ~~v~~~~~s~~~~~l~s 279 (294)
.++ .+..+|+.++.
T Consensus 510 ~p~---~~~~~G~~yv~ 523 (571)
T 2ad6_A 510 SPM---TYSFKGKQYIG 523 (571)
T ss_dssp CCE---EEEETTEEEEE
T ss_pred eeE---EEEECCEEEEE
Confidence 333 35567764443
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.58 E-value=2.9e-05 Score=64.19 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=45.3
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCc----ceE-EEEeCC--CCCc-eEEEee------CCCcEEEEEcCCCceEE
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGD----SIN-EIRTQP--LKPS-LVVSAS------KDESVRLWNVQTGICIL 90 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~----~v~-~~~~~~--~~~~-~l~s~~------~dg~i~vwd~~~~~~~~ 90 (294)
.++.++.|+.|.-+|..+|+.+........ .+. .-.... .+++ .++.++ .+|.|.-+|..+|+.+.
T Consensus 119 ~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 119 KVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 688888999999999999998766543221 111 111111 0122 565654 37899999999999887
Q ss_pred Eee
Q 022590 91 IFA 93 (294)
Q Consensus 91 ~~~ 93 (294)
...
T Consensus 199 ~~~ 201 (582)
T 1flg_A 199 MRP 201 (582)
T ss_dssp EEE
T ss_pred ecC
Confidence 654
No 272
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.58 E-value=2e-06 Score=69.77 Aligned_cols=222 Identities=11% Similarity=0.047 Sum_probs=129.1
Q ss_pred eeEEEEEeecCCCceEEEEee------------------cCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEE
Q 022590 10 SFYTVSWACNVDGIPFLVAGG------------------INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 71 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~------------------~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 71 (294)
....+++.--|+++ ++++++ .++.+.+.|.++.+...++.--. .-..++++| +++++++
T Consensus 135 ~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~v 211 (595)
T 1fwx_A 135 GIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFS 211 (595)
T ss_dssp SEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEE
T ss_pred CCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CCCEEEE
Confidence 35566653128888 676663 35689999999988887776433 456788999 7777777
Q ss_pred eeCCC--------------------------------------cEEEEEcCC--Cce-EEEeeccCCCCCceeEEEEecC
Q 022590 72 ASKDE--------------------------------------SVRLWNVQT--GIC-ILIFAGAGGHRNEVLSVDFHPS 110 (294)
Q Consensus 72 ~~~dg--------------------------------------~i~vwd~~~--~~~-~~~~~~~~~~~~~v~~l~~~~~ 110 (294)
.+.+. .|.|.|..+ ++. +..+. -.....++.++|
T Consensus 212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip----vg~~PhGv~~sP- 286 (595)
T 1fwx_A 212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP----IANNPHGCNMAP- 286 (595)
T ss_dssp EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE----EESSCCCEEECT-
T ss_pred EecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe----cCCCceEEEEcC-
Confidence 77543 477777776 444 44444 223567899999
Q ss_pred CCc-eEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEeeCCCeE
Q 022590 111 DIY-RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEI 187 (294)
Q Consensus 111 ~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i 187 (294)
++. .++++..+.+|.++|+.+........+.. ...+.....-......++|+ |...++...|+.|
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~------------~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADP------------RSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCG------------GGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEE
T ss_pred CCCEEEEeCCCCCeEEEEECcccccccccccCc------------ccceEEEcCCCCCcceEEECCCCeEEEEEecCCcE
Confidence 555 55556678899999999743211110000 01111111122334556665 6445566779999
Q ss_pred EEecCCCCCC-CCCCCCceeeeeeecCCCCe-----eEEEEcccCCcceEEEEc--C-CCe----------EEEEeccCC
Q 022590 188 VLWEPKMKEQ-SPGEGTADILQKYPVPECDI-----WFIKFSCDFHYNAAAIGN--R-EGK----------IFVWELQSS 248 (294)
Q Consensus 188 ~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~l~~~~--~-dg~----------i~i~d~~~~ 248 (294)
.+||+..... .........+.++..+-.+- ..+.++|+|+ +|++.. . |.. -.++|+..+
T Consensus 355 ~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk--~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 355 VKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND--WLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS--EEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC--EEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 9999876210 00000233566666654321 1234578885 555543 2 332 188999666
Q ss_pred Cceee
Q 022590 249 PPVLI 253 (294)
Q Consensus 249 ~~~~~ 253 (294)
+...+
T Consensus 433 ~m~lv 437 (595)
T 1fwx_A 433 KMVLV 437 (595)
T ss_dssp SCEEE
T ss_pred cEEEE
Confidence 53333
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=0.00026 Score=61.04 Aligned_cols=241 Identities=12% Similarity=-0.001 Sum_probs=141.4
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee--------------cccCcceEEEEeCCCCCceEEEeeC
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF--------------VGHGDSINEIRTQPLKPSLVVSASK 74 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------------~~h~~~v~~~~~~~~~~~~l~s~~~ 74 (294)
..|.++... ++|. |..|+..+-|.+++..+++..... ......|.++...+ ++. |-.|+.
T Consensus 258 ~~i~~i~~d--~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWigt~ 331 (781)
T 3v9f_A 258 SYIFSIKQL--KDNK--LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIGTW 331 (781)
T ss_dssp CCEEEEEEC--TTSE--EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEEEB
T ss_pred ceEEEEEEC--CCCC--EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEEec
Confidence 457777764 6775 666776556888898765432211 11345789998887 555 555666
Q ss_pred CCcEEEEEcCCCceEEEee------ccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCC
Q 022590 75 DESVRLWNVQTGICILIFA------GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 148 (294)
Q Consensus 75 dg~i~vwd~~~~~~~~~~~------~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 148 (294)
++-|..++..++....... ...-....|.++...+ ++. |..|+.++-|..||..+..... +
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~---~-------- 398 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGK-LWIGTDGGGINVFENGKRVAIY---N-------- 398 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSC-EEEEEBSSCEEEEETTEEEEEC---C--------
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCC-EEEEeCCCcEEEEECCCCeEEE---c--------
Confidence 6668888886654332211 0001235689998876 555 6667766778889877521100 0
Q ss_pred CCCceeeeceEEeecCCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeee---cCCCCeeEEEEcc
Q 022590 149 FPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP---VPECDIWFIKFSC 224 (294)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~ 224 (294)
..........|.++..+ ...|..|+.++.+..+|.++++ +..+. .....|.++...+
T Consensus 399 ---------~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~v~~i~~d~ 459 (781)
T 3v9f_A 399 ---------KENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK----------FQIIELEKNELLDVRVFYEDK 459 (781)
T ss_dssp --------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE----------EEECCSTTTCCCCEEEEEECT
T ss_pred ---------cCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc----------EEEeccCCCCCCeEEEEEECC
Confidence 00001234567777765 5566677777789999987553 22221 2345677777777
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCceeeeecc-ccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
++ .|..|+. +.+..+|..+.+........ .......|.++...++|.+.+....+| |..||.+
T Consensus 460 ~g---~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~ 523 (781)
T 3v9f_A 460 NK---KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPD 523 (781)
T ss_dssp TS---EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTT
T ss_pred CC---CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCC
Confidence 66 3555555 56888998776532222111 011135799999999988666554355 6667654
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.52 E-value=0.00014 Score=55.51 Aligned_cols=191 Identities=10% Similarity=-0.009 Sum_probs=102.8
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCC-----------------CCCceeEEEEecCCCceEEe
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGG-----------------HRNEVLSVDFHPSDIYRIAS 117 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~~~~~~l~~ 117 (294)
...+++|.+ ++++++++..++.|..|+..+++.. .+..... ....+..+++.+.+++ |+.
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 456788998 7787888888999999998765433 2221000 0134788999863455 555
Q ss_pred eecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee-cCCCceeeccee---cceEEEee-----------
Q 022590 118 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL---GDFILSKS----------- 182 (294)
Q Consensus 118 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~---~~~l~~~~----------- 182 (294)
+...+.+..+|........ +.. ... ........+.++ |++.++-.
T Consensus 97 ~d~~~~i~~~d~~~g~~~~---~~~-----------------~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQ---LAT-----------------SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp EETTTEEEEECTTCEECEE---EES-----------------EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred EECCCCEEEEeCCCCEEEE---ecc-----------------cCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 5444558888866421100 000 000 000112333332 33333321
Q ss_pred ------CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeec
Q 022590 183 ------VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 256 (294)
Q Consensus 183 ------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 256 (294)
.++.|..||..+++ ...+.........++++|+++ .++++-...+.|..|++..........+
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~----------~~~~~~~~~~p~gia~~~dg~-~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKE----------TTLLLKELHVPGGAEVSADSS-FVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTE----------EEEEEEEESCCCEEEECTTSS-EEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred ehcccCCCceEEEEeCCCCE----------EEEeccCCccCcceEECCCCC-EEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 13667777765442 111111112345789999984 2344446678999999875321111111
Q ss_pred cccccCCCeEEEEEccCCCEEEEecc
Q 022590 257 SHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
.. ..+ ...++++++|++.++...
T Consensus 226 ~~--~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 226 VK--IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EE--CSS-EEEEEECTTSCEEEEEEE
T ss_pred Ee--CCC-CCCeEECCCCCEEEEecC
Confidence 11 112 678999999987776544
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.51 E-value=0.00016 Score=55.08 Aligned_cols=202 Identities=5% Similarity=-0.076 Sum_probs=115.1
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCC----ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
...+++|. +.+..+.++-..++.|..+++.. ......+...-.....+++.+.++.++++-...+.|.+.++..
T Consensus 31 ~p~g~~~d--~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 31 NVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp SEEEEEEE--TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEE--eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 34577776 65543666666678999999875 2222222222245678898864556666666788999999865
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
......+. ..-.....+++.|.++.++++.... +.|...++.... ........
T Consensus 109 ~~~~~~~~---~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-----------------------~~~~~~~~ 162 (316)
T 1ijq_A 109 VKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTEN 162 (316)
T ss_dssp SSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-----------------------EEEEECSS
T ss_pred CceEEEEE---CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-----------------------eEEEEECC
Confidence 44333333 2335678999998555555554333 678777775411 00011112
Q ss_pred CCceeeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 165 SNYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 165 ~~~i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
-.....++++ +..| ++-...+.|..+|+..... ..+............+++.. + .++++-...+.|.
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-------~~~~~~~~~~~~P~giav~~-~--~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVFE-D--KVFWTDIINEAIF 232 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEEECTTTTSSEEEEEEET-T--EEEEEETTTTEEE
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-------EEEeecCCccCCcEEEEEEC-C--EEEEEECCCCeEE
Confidence 2345566775 4444 4445567899999874321 12211111123456777742 2 4566666778898
Q ss_pred EEeccCCC
Q 022590 242 VWELQSSP 249 (294)
Q Consensus 242 i~d~~~~~ 249 (294)
.++..+++
T Consensus 233 ~~~~~~g~ 240 (316)
T 1ijq_A 233 SANRLTGS 240 (316)
T ss_dssp EEETTTCC
T ss_pred EEeCCCCc
Confidence 88876554
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.50 E-value=6.2e-06 Score=69.73 Aligned_cols=220 Identities=7% Similarity=-0.118 Sum_probs=118.4
Q ss_pred CCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC----CceEEEeeccCCCCCceeEEEE
Q 022590 32 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT----GICILIFAGAGGHRNEVLSVDF 107 (294)
Q Consensus 32 dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~v~~l~~ 107 (294)
.+.|+..++.+.+....+.. ...+..|+|.+.++.++++-...+.|..+++.. ......+. ........|++
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~---~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC---SCC--CCCEEC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe---CCCCCcceEEE
Confidence 35788888876655444433 345678999984444555555668899999865 22211111 11224567888
Q ss_pred ecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEee-CC
Q 022590 108 HPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS-VD 184 (294)
Q Consensus 108 ~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~d 184 (294)
.+.++.++++-...+.|.++++..... .............++++ +.+|+.+. ..
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg~~~-----------------------~~l~~~~~~~P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKGVKR-----------------------KTLFREQGSKPRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSSCCE-----------------------EEECCCSSCCCCCEECCSSSSCCEECCCSS
T ss_pred EeeCCcEEEEeccCCeEEEEecCCCce-----------------------EEEEeCCCCCcceEEEccCCCcEEEcccCC
Confidence 764667666666678899998875211 01111111222344443 33333332 22
Q ss_pred -CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCC
Q 022590 185 -NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 263 (294)
Q Consensus 185 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 263 (294)
+.|..+++..... ..+ ..........|+++|++. .+.++-...+.|..+++.......+.... ....
T Consensus 518 ~~~I~~~~~dG~~~-------~~l--~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~~ 585 (699)
T 1n7d_A 518 PAKIKKGGLNGVDI-------YSL--VTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILEDE--KRLA 585 (699)
T ss_dssp SCCEEBCCSSSCCC-------CEE--SCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEECSSSSCCEEECCCS--SSCS
T ss_pred CCeEEEEeCCCCCe-------eEE--EeCCCCCccEEEEeccCC-EEEEEecCCCeEEEEccCCCceEEEEecC--CcCC
Confidence 6777777653321 011 111123456799999875 45555567788999999764432222211 1112
Q ss_pred CeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 264 PIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 264 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
....|++..+ .++++....+.|..++.
T Consensus 586 ~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 586 HPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp SCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 2345566544 45555566678888875
No 277
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.48 E-value=0.00017 Score=54.34 Aligned_cols=229 Identities=11% Similarity=0.084 Sum_probs=113.4
Q ss_pred CCceEEEEee-cC-----CeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCC-----CcEEEEEcCCCc
Q 022590 21 DGIPFLVAGG-IN-----GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKD-----ESVRLWNVQTGI 87 (294)
Q Consensus 21 ~~~~~l~~~~-~d-----g~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 87 (294)
++. +++.|+ .+ ..+.+||..+.+-. ..+.........+.. ++.+++.|+.+ ..+.+||+.+++
T Consensus 14 ~~~-i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEV-LLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL---HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEE-EEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCE-EEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE---CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 344 677777 33 36889998776422 122211111122222 45777777765 458899988766
Q ss_pred ---eEEEeeccCCCCCceeEEEEecCCCceEEeeecCC-----cEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 88 ---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 88 ---~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
-... ......... .++... ++.+++.|+.++ .+.+||+.+..-.. +.
T Consensus 90 ~~~W~~~-~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~---------------------~~ 144 (301)
T 2vpj_A 90 DGVWYSV-APMNVRRGL-AGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM---------------------LG 144 (301)
T ss_dssp TCCCEEE-CCCSSCCBS-CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE---------------------EE
T ss_pred CCeeEEC-CCCCCCccc-eeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEE---------------------CC
Confidence 3222 211111111 222222 567777777543 57777776532110 00
Q ss_pred EeecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 160 IASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
........-.++..++.+++.|+.+ ..+..||+.+.+ ...+...+........+. .++ .+++.|
T Consensus 145 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-------W~~~~~~p~~r~~~~~~~--~~~--~i~v~G 213 (301)
T 2vpj_A 145 DMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH-------WTNVTPMATKRSGAGVAL--LND--HIYVVG 213 (301)
T ss_dssp ECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEE--ETT--EEEEEC
T ss_pred CCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc-------EEeCCCCCcccccceEEE--ECC--EEEEEe
Confidence 1111111112222346667777654 458888987653 122222222211112222 233 466666
Q ss_pred cCC-----CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC-----CcEEEEecCC
Q 022590 235 NRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAIP 293 (294)
Q Consensus 235 ~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~ 293 (294)
+.+ ..+.+||+.+.+......+.. .......+. -++++++.|+.+ ..+.+||.++
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTVTSMTT--PRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCCCCcccceEEEEeCCCCcEEECCCCCC--cccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 653 568999998876444333321 111122222 267777888765 3577888754
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.48 E-value=0.00019 Score=54.63 Aligned_cols=225 Identities=7% Similarity=-0.082 Sum_probs=130.1
Q ss_pred EEEEeecCCeEEEEEcCCccc-cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE-EEeeccCCCCCce
Q 022590 25 FLVAGGINGIIRVIDVSNEKL-HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI-LIFAGAGGHRNEV 102 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v 102 (294)
+|+.+. ...|+..+++.... ...+......+..++|.+.++.++.+-...+.|..+++..+... ..+. ..-...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~---~~l~~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV---SGLLSP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE---ECCSCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc---CCCCCc
Confidence 444444 45799999977642 22222223456789999855666666667788999998765321 1222 122356
Q ss_pred eEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEE
Q 022590 103 LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILS 180 (294)
Q Consensus 103 ~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~ 180 (294)
..+++.+.++.++++-...+.|.++++.... ..............++++ +..|+.
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------~~~l~~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSL-----------------------RKVLFWQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------CEEEECSSCSSEEEEEEEGGGTEEEE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCc-----------------------EEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 7899987566766776677889999887521 011111122333455554 344444
Q ss_pred ee--CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc
Q 022590 181 KS--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH 258 (294)
Q Consensus 181 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 258 (294)
+. ..+.|...++..... .......-.....+++++++. .+.++-...+.|..+|+..........
T Consensus 139 td~~~~~~I~r~~~dG~~~---------~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d~dG~~~~~~~~--- 205 (318)
T 3sov_A 139 TDWGEVPKIERAGMDGSSR---------FIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVK--- 205 (318)
T ss_dssp EECSSSCEEEEEETTSCSC---------EEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEC---
T ss_pred EecCCCCEEEEEEcCCCCe---------EEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEcCCCCceEEEec---
Confidence 33 357788888764321 111112234567899998764 455555667899999987644322221
Q ss_pred cccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 259 AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 259 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
........+++.. +.++.+-...+.|..++.
T Consensus 206 -~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 206 -GSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp -SCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred -CCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 1223456777753 345555556677877775
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.44 E-value=0.00034 Score=57.89 Aligned_cols=81 Identities=11% Similarity=0.105 Sum_probs=48.5
Q ss_pred CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCC
Q 022590 184 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 263 (294)
Q Consensus 184 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 263 (294)
+|.|.-||+.+++. +-+.+... +...-.+...+ .+++.++.||.++.||.++++.+............
T Consensus 465 ~G~l~A~D~~tG~~---------~W~~~~~~-~~~~g~~~tag--glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~ 532 (582)
T 1flg_A 465 VGSLRAMDPVSGKV---------VWEHKEHL-PLWAGVLATAG--NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSP 532 (582)
T ss_dssp SEEEEEECTTTCCE---------EEEEEESS-CCCSCCEEETT--TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred cceEEEEECCCCCE---------EEEecCCC-CCcccceEeCC--CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccC
Confidence 67899999988763 22222211 11111112223 47788999999999999999877666654222222
Q ss_pred CeEEEEEccCCC-EEEE
Q 022590 264 PIRQTAMSYDGS-TILS 279 (294)
Q Consensus 264 ~v~~~~~s~~~~-~l~s 279 (294)
+ +.+..+|+ |+++
T Consensus 533 P---~~y~~~G~qYv~~ 546 (582)
T 1flg_A 533 P---ITWEQDGEQYLGV 546 (582)
T ss_dssp C---EEEEETTEEEEEE
T ss_pred c---eEEEECCEEEEEE
Confidence 2 55667876 4444
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.43 E-value=0.00036 Score=55.53 Aligned_cols=247 Identities=9% Similarity=0.011 Sum_probs=130.6
Q ss_pred eeEEEEEeecCC---CceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCC---Cc-EEEEE
Q 022590 10 SFYTVSWACNVD---GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD---ES-VRLWN 82 (294)
Q Consensus 10 ~v~~~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~-i~vwd 82 (294)
.-..++|. |+ |. |..+...+.|+.++..+++..... ........+++++ +++++++-... .. +...+
T Consensus 140 ~P~gvavd--~~s~~g~--Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFD--PNSNYDD--LYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEEC--TTTTTCE--EEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEc--cccCCCE--EEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEE
Confidence 34577776 63 54 444444489999998777654433 3445689999999 77755554321 11 22233
Q ss_pred cCCCce-EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 83 VQTGIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
...+.. ...+. .-.....++++|.++.++++-..++.|+.+|...+... ..+...
T Consensus 214 ~~~~~~~~~~~~----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~--------------------~~~~~~ 269 (433)
T 4hw6_A 214 RASGFTERLSLC----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT--------------------EEEVMM 269 (433)
T ss_dssp GGGTTCCEEEEE----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE--------------------EEEEEC
T ss_pred CCCCeecccccc----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE--------------------EEEecc
Confidence 222211 01121 22345678898856666666667788999988742110 000000
Q ss_pred ecCCCceeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeee------------ecCCCCeeEEEE----
Q 022590 162 SVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------------PVPECDIWFIKF---- 222 (294)
Q Consensus 162 ~~~~~~i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~---- 222 (294)
. ....-..++++ ++ ++++-...+.|+.++......... ....+... ...-.....+++
T Consensus 270 ~-~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~ 346 (433)
T 4hw6_A 270 D-TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA--VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNE 346 (433)
T ss_dssp S-CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECG
T ss_pred C-CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC--cEEEEEecCCCCccCCCcccceEEcCCccEEEEccc
Confidence 0 11111246665 66 444545578899977653211000 00000000 001123566888
Q ss_pred -----cccCCcceEEEEcCCCeEEEEeccCCCceeeeeccc-------------cccCCCeEEEEEc-cCCCEEEEeccC
Q 022590 223 -----SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH-------------AQSKSPIRQTAMS-YDGSTILSCCED 283 (294)
Q Consensus 223 -----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~~~~v~~~~~s-~~~~~l~s~~~d 283 (294)
.+++ .+.++-...+.|+.++. ++......-... ...-.....++++ ++|.++++-..+
T Consensus 347 ~y~~dd~~g--~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 347 AYAGEEDEY--DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp GGTTSSCCE--EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred cccccCCCC--cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 4444 56666667788999885 332111110000 0112346789999 677777776778
Q ss_pred CcEEEEecC
Q 022590 284 GAIWRWDAI 292 (294)
Q Consensus 284 g~i~vw~~~ 292 (294)
+.|+..+++
T Consensus 424 ~rIr~i~~e 432 (433)
T 4hw6_A 424 HRVRKIAPE 432 (433)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEecC
Confidence 889988875
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=0.00075 Score=57.79 Aligned_cols=225 Identities=8% Similarity=-0.099 Sum_probs=126.2
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC----ceEEEeeccCCCCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG----ICILIFAGAGGHRN 100 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~ 100 (294)
+|+.+. ...|+..++........+. ....+..|+|.+.++.++++-...+.|+.+++... .....+. ....
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~---~~l~ 471 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQ 471 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC---SSCS
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe---cCCC
Confidence 444443 3467888877655433333 34567899999855666666666788988888643 2222222 2334
Q ss_pred ceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceE
Q 022590 101 EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI 178 (294)
Q Consensus 101 ~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l 178 (294)
....|++.+.+++++++-...+.|.+.++.... ..............|+++ ...|
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-----------------------~~~l~~~~l~~P~gIaVDp~~g~L 528 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------RKTLFRENGSKPRAIVVDPVHGFM 528 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-----------------------EEEEEECTTCCEEEEEEETTTTEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-----------------------EEEEEeCCCCCcceEEEecCCCCE
Confidence 577899988556777777778899999987521 111112222345566665 2344
Q ss_pred EEee-C-CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeec
Q 022590 179 LSKS-V-DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 256 (294)
Q Consensus 179 ~~~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 256 (294)
+.+. . .+.|...++.... ..............|++.+... .+.++-...+.|..+++.......+...
T Consensus 529 YwtD~g~~~~I~~~~~dG~~---------~~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d~dG~~~~~v~~~ 598 (791)
T 3m0c_C 529 YWTDWGTPAKIKKGGLNGVD---------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSIDVNGGNRKTILED 598 (791)
T ss_dssp EEEECSSSCEEEEEETTSCC---------EEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEEEC
T ss_pred EEecCCCCCeEEEEecCCCc---------eEEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEecCCCceEEEecC
Confidence 4433 2 3678888876432 1111222235678899997764 3444445667899999876543333221
Q ss_pred cccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 257 SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
. .......+|++..+ .++++-...+.|...+
T Consensus 599 ~--~~l~~P~glav~~~-~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 599 E--KRLAHPFSLAVFED-KVFWTDIINEAIFSAN 629 (791)
T ss_dssp T--TTTSSEEEEEEETT-EEEEEETTTTEEEEEE
T ss_pred C--CccCCCCEEEEeCC-EEEEEECCCCEEEEEe
Confidence 1 11123446666432 3444444556666665
No 282
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.36 E-value=0.00038 Score=52.63 Aligned_cols=226 Identities=8% Similarity=0.015 Sum_probs=112.5
Q ss_pred EEEEeecC--CeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCC----CcEEEEEcCCCceEEEeeccC
Q 022590 25 FLVAGGIN--GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKD----ESVRLWNVQTGICILIFAGAG 96 (294)
Q Consensus 25 ~l~~~~~d--g~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~ 96 (294)
+++.|+.+ ..+.+||..+++-. ..+......-..+.+ ++.+++.|+.+ ..+.+||+.+++-...-. ..
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-PP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC-CS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC-CC
Confidence 66667653 57889998776422 222211122222222 55677888755 568889988775433222 11
Q ss_pred CCCCceeEEEEecCCCceEEeeecC------CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceee
Q 022590 97 GHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 170 (294)
Q Consensus 97 ~~~~~v~~l~~~~~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 170 (294)
....-.+++.. ++.+++.|+.+ ..+.+||+.+..-.. .+. .......-.+
T Consensus 90 -~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~--------~~~-------------~p~~r~~~~~ 145 (306)
T 3ii7_A 90 -TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT--------KPS-------------MLTQRCSHGM 145 (306)
T ss_dssp -SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE--------ECC-------------CSSCCBSCEE
T ss_pred -ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe--------CCC-------------CcCCcceeEE
Confidence 11111222222 66777777765 457888877632110 000 0000111112
Q ss_pred cceecceEEEeeC---------CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC----
Q 022590 171 NRWLGDFILSKSV---------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE---- 237 (294)
Q Consensus 171 ~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---- 237 (294)
+..++.+++.|+. -..+.+||+.+.+ ...+...+.....-..+.+ ++ .+++.|+.+
T Consensus 146 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~--~i~v~GG~~~~~~ 214 (306)
T 3ii7_A 146 VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-------WTELCPMIEARKNHGLVFV--KD--KIFAVGGQNGLGG 214 (306)
T ss_dssp EEETTEEEEECCEESCTTTCEECCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--TT--EEEEECCEETTEE
T ss_pred EEECCEEEEECCCCCCCCcccccceEEEeCCCCCe-------EEECCCccchhhcceEEEE--CC--EEEEEeCCCCCCC
Confidence 2234566666653 3458889987653 1222222221111112222 33 466666543
Q ss_pred -CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC-----CcEEEEecCC
Q 022590 238 -GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAIP 293 (294)
Q Consensus 238 -g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~ 293 (294)
..+.+||+.+.+......+. ........+.+ ++++++.|+.+ ..+.+||.++
T Consensus 215 ~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 215 LDNVEYYDIKLNEWKMVSPMP--WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp BCCEEEEETTTTEEEECCCCS--CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CceEEEeeCCCCcEEECCCCC--CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 46889999887544333332 11122233333 67788888754 4578888764
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.34 E-value=1.6e-05 Score=67.30 Aligned_cols=202 Identities=6% Similarity=-0.049 Sum_probs=109.1
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCC----ccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 85 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 85 (294)
.+..++|. +.+..++++-...+.|+.+++.. ......+.........|++.+.++.++++-...+.|.+.++..
T Consensus 407 ~p~gla~d--~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEE--TTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred ceEEEccc--cccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 34566776 65552444445667899998875 2222222222234567888864666666666778899999865
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
......+. ........|++.|.++.++++-... +.|..+++.... ........
T Consensus 485 ~~~~~l~~---~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-----------------------~~~l~~~~ 538 (699)
T 1n7d_A 485 VKRKTLFR---EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTEN 538 (699)
T ss_dssp CCEEEECC---CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-----------------------CCEESCSS
T ss_pred CceEEEEe---CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-----------------------eeEEEeCC
Confidence 44333332 1224567899998555555544333 677776665411 00001111
Q ss_pred CCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 165 SNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 165 ~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
-.....|+++ +.++++-...+.|..+|+..... ..+............+++..+ .++++....+.|.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-------~~~~~~~~~~~~P~glavd~~---~lywtd~~~~~V~ 608 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIF 608 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-------EEECCCSSSCSSCCCCEEETT---EEEEECSTTTCEE
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-------EEEEecCCcCCCceEeEEECC---EEEEEeCCCCeEE
Confidence 2234456665 34555555677899999864321 111111111122334555433 3555666778899
Q ss_pred EEeccCCC
Q 022590 242 VWELQSSP 249 (294)
Q Consensus 242 i~d~~~~~ 249 (294)
.++..+++
T Consensus 609 ~~d~~~G~ 616 (699)
T 1n7d_A 609 SANRLTGS 616 (699)
T ss_dssp EEETTTEE
T ss_pred EEEccCCC
Confidence 99876654
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.31 E-value=0.0012 Score=56.56 Aligned_cols=203 Identities=5% Similarity=-0.069 Sum_probs=112.6
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc----cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
..+.+|+|. +.+..++++-...+.|+.+++... .....+.........|++.+.+++++++-...+.|.+.++.
T Consensus 424 ~~~~gl~~d--~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 424 RNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SSEEEEEEE--TTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEeec--ccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345567776 544425566666788888887653 22223332345567899887455677777778899999996
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.......+. ..-.....|++.|..+.++++-... +.|...++.... .......
T Consensus 502 G~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-----------------------~~~lv~~ 555 (791)
T 3m0c_C 502 GVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTE 555 (791)
T ss_dssp SSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-----------------------EEEEECS
T ss_pred CCeEEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-----------------------eEEEEeC
Confidence 554433333 2345689999999556655554333 678887776521 1111112
Q ss_pred CCCceeeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 164 HSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
.-.....|+++ +..| ++=...+.|..+++..... ..+............|++. +. .++++-...+.|
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-------~~v~~~~~~l~~P~glav~--~~-~lYwtD~~~~~I 625 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVF--ED-KVFWTDIINEAI 625 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEEECTTTTSSEEEEEEE--TT-EEEEEETTTTEE
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-------EEEecCCCccCCCCEEEEe--CC-EEEEEECCCCEE
Confidence 22345566665 3444 4444567888888865431 1111111111234455553 32 355555566778
Q ss_pred EEEeccCCC
Q 022590 241 FVWELQSSP 249 (294)
Q Consensus 241 ~i~d~~~~~ 249 (294)
...+..+++
T Consensus 626 ~~~dk~tG~ 634 (791)
T 3m0c_C 626 FSANRLTGS 634 (791)
T ss_dssp EEEETTTCC
T ss_pred EEEeCCCCc
Confidence 888765553
No 285
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.31 E-value=0.0005 Score=51.87 Aligned_cols=226 Identities=12% Similarity=0.122 Sum_probs=110.4
Q ss_pred EEEEeecC----CeEEEEEcCCccccc--eecccCcceEEEEeCCCCCceEEEeeCCC-----cEEEEEcCCCceEEEee
Q 022590 25 FLVAGGIN----GIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLVVSASKDE-----SVRLWNVQTGICILIFA 93 (294)
Q Consensus 25 ~l~~~~~d----g~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~ 93 (294)
+++.|+.+ ..+..||..+.+-.. .+......-..+.+ ++.+++.|+.++ .+.+||..+.+-... .
T Consensus 18 i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~ 93 (302)
T 2xn4_A 18 MVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-A 93 (302)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-C
T ss_pred EEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeC-C
Confidence 67777754 468889987764221 11111111122222 457777777553 578889877653332 2
Q ss_pred ccCCCCCceeEEEEecCCCceEEeeecCC-----cEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 94 GAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 94 ~~~~~~~~v~~l~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
........ .+++.. ++.+++.|+.++ .+.+||+.+..- ...+ .........
T Consensus 94 ~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--------~~~~-------------~~p~~r~~~ 149 (302)
T 2xn4_A 94 NMRDRRST-LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEW--------FHVA-------------PMNTRRSSV 149 (302)
T ss_dssp CCSSCCBS-CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEE--------EEEC-------------CCSSCCBSC
T ss_pred CCCccccc-eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeE--------eecC-------------CCCCcccCc
Confidence 11111111 222332 567788887664 466777665221 1000 000011111
Q ss_pred eecceecceEEEeeCC-------CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC----
Q 022590 169 DCNRWLGDFILSKSVD-------NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE---- 237 (294)
Q Consensus 169 ~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---- 237 (294)
.++.+++.+++.|+.+ ..+..||+.+.+ ...+...+........+. .++ .+++.|+.+
T Consensus 150 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~--~~~--~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 150 GVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE-------WTYIAEMSTRRSGAGVGV--LNN--LLYAVGGHDGPLV 218 (302)
T ss_dssp EEEEETTEEEEECCEETTTTEECCCEEEEETTTTE-------EEEECCCSSCCBSCEEEE--ETT--EEEEECCBSSSSB
T ss_pred eEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc-------EEECCCCccccccccEEE--ECC--EEEEECCCCCCcc
Confidence 1222346666666542 358889987653 122222222211112222 233 466666653
Q ss_pred -CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCC-----cEEEEecCC
Q 022590 238 -GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG-----AIWRWDAIP 293 (294)
Q Consensus 238 -g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~vw~~~~ 293 (294)
..+.+||+.+.+......+... ...-..+ ..++++++.|+.++ .+.+||.++
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~~~~--r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADMNMC--RRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSC--CBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred cceEEEEeCCCCCEeeCCCCCCc--cccCeEE--EECCEEEEECCcCCCcccccEEEEcCCC
Confidence 4688999988764443333211 1111222 23677888887654 488888764
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.23 E-value=0.001 Score=52.43 Aligned_cols=203 Identities=5% Similarity=-0.069 Sum_probs=116.7
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc----cccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
..+..++|. +.+..+..+-...+.|+.+++... .....+.........|++.+.+++++++-...+.|.+.+++
T Consensus 112 ~~~~~l~~d--~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 112 RNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCEEEEEEE--TTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred CcceEEeee--eccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 456778886 644425555566788988888652 22222332345678888887456666666677899999987
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeec-CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.......+. ..-.....|++.|.++.++.+-.. .+.|...++.... .......
T Consensus 190 g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-----------------------~~~~~~~ 243 (400)
T 3p5b_L 190 GVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTE 243 (400)
T ss_dssp TCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-----------------------CEEEECS
T ss_pred CCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-----------------------cEEEEEC
Confidence 555444443 233457899999955555555422 4678888776511 1111111
Q ss_pred CCCceeeccee--cceEE-EeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 164 HSNYVDCNRWL--GDFIL-SKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 164 ~~~~i~~~~~~--~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
.-.....++++ +..|+ +=...+.|..+|+..... ..+............+++. +. .++.+-...+.|
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------~~~~~~~~~l~~P~gl~v~--~~-~lywtd~~~~~V 313 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVF--ED-KVFWTDIINEAI 313 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-------EEEEECSSTTSSEEEEEEE--TT-EEEEEESSSCSE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-------EEEEeCCCCCCCCEEEEEe--CC-EEEEecCCCCeE
Confidence 22345667766 44444 444567899999864321 1121111122344566663 32 355666677888
Q ss_pred EEEeccCCC
Q 022590 241 FVWELQSSP 249 (294)
Q Consensus 241 ~i~d~~~~~ 249 (294)
..+|..+++
T Consensus 314 ~~~~~~~G~ 322 (400)
T 3p5b_L 314 FSANRLTGS 322 (400)
T ss_dssp EEEESSSCC
T ss_pred EEEEcCCCC
Confidence 888866554
No 287
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.20 E-value=0.00091 Score=50.62 Aligned_cols=229 Identities=14% Similarity=0.074 Sum_probs=111.1
Q ss_pred CCceEEEEeecC----CeEEEEEcCCccccc--eecccCcceEEEEeCCCCCceEEEeeC----C-----CcEEEEEcCC
Q 022590 21 DGIPFLVAGGIN----GIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLVVSASK----D-----ESVRLWNVQT 85 (294)
Q Consensus 21 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~----d-----g~i~vwd~~~ 85 (294)
++. +++.|+.+ ..+.+||..+.+-.. .+......- +++.. ++.+++.|+. + ..+.+||+.+
T Consensus 24 ~~~-i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRL-IYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCC-EEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCE-EEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 455 77777742 368899987764321 111111111 22222 4567777765 2 4578889877
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-----CcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
.+-.. +......... .+++.. ++.+++.|+.+ ..+.+||+.+..- ...+.
T Consensus 100 ~~W~~-~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--------~~~~~------------- 154 (308)
T 1zgk_A 100 NQWSP-CAPMSVPRNR-IGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW--------HLVAP------------- 154 (308)
T ss_dssp TEEEE-CCCCSSCCBT-CEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE--------EECCC-------------
T ss_pred CeEeE-CCCCCcCccc-cEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE--------eECCC-------------
Confidence 65332 2211111111 222222 56777777654 3577777765321 11000
Q ss_pred eecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc
Q 022590 161 ASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 235 (294)
Q Consensus 161 ~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 235 (294)
.......-.++.+++.+++.|+.+ ..+..||+.+.+- ..+...+........+.+ ++ .+++.|+
T Consensus 155 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~--~iyv~GG 223 (308)
T 1zgk_A 155 MLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEW-------RMITAMNTIRSGAGVCVL--HN--CIYAAGG 223 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE-------EECCCCSSCCBSCEEEEE--TT--EEEEECC
T ss_pred CCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeE-------eeCCCCCCccccceEEEE--CC--EEEEEeC
Confidence 000011111222346666676654 4588888876531 111112222221222222 33 4666666
Q ss_pred CC-----CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC-----CcEEEEecCC
Q 022590 236 RE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAIP 293 (294)
Q Consensus 236 ~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vw~~~~ 293 (294)
.+ ..+.+||+.+.+......+. .....-..+. -++++++.|+.+ ..+.+||+++
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMK--HRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCC--CCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 54 56899999887544333222 1111122222 267778888754 3477888764
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.17 E-value=0.0013 Score=54.57 Aligned_cols=204 Identities=10% Similarity=0.016 Sum_probs=109.1
Q ss_pred ceEEEeeC-CCcEEEEEc-CCCceEEEeeccCCCC--------CceeEEEEecCCCce----EEeeecCCcEEEEecccc
Q 022590 67 SLVVSASK-DESVRLWNV-QTGICILIFAGAGGHR--------NEVLSVDFHPSDIYR----IASCGMDNTVKIWSMKEF 132 (294)
Q Consensus 67 ~~l~s~~~-dg~i~vwd~-~~~~~~~~~~~~~~~~--------~~v~~l~~~~~~~~~----l~~~~~dg~i~~wd~~~~ 132 (294)
..++.++. ++.|.-+|. .+|+.+-.+....... .....+++.| .+.. ++.++.|+.+..+|..++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEEEEECCCC
Confidence 35666666 889999999 8999988776311100 0012345544 2333 777888999999999885
Q ss_pred ccccccceeecCCCCCCCCceeeeceEEeecCCCceee-cceecceEEEee------CCCeEEEecCCCCCCCCCCCCce
Q 022590 133 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKS------VDNEIVLWEPKMKEQSPGEGTAD 205 (294)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~ 205 (294)
+..-....... .....+.+ -...+..+++++ .++.|+-+|.++++.........
T Consensus 142 ~~~W~~~~~~~-------------------~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 142 ETVWKVENSDI-------------------KVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp CEEEEEECCCG-------------------GGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred CEEEeecCCCC-------------------CccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 44322111000 00001111 111244555555 37999999999887421100000
Q ss_pred eeee----------------------------eecCCCCe-eEEEEcccCCcceEEEEcCC----------------CeE
Q 022590 206 ILQK----------------------------YPVPECDI-WFIKFSCDFHYNAAAIGNRE----------------GKI 240 (294)
Q Consensus 206 ~~~~----------------------------~~~~~~~i-~~~~~~~~~~~~~l~~~~~d----------------g~i 240 (294)
.... +......+ ..+++.+.. ..++.+..+ +.|
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~--g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT--NLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT--TEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC--CEEEEeCCCCccccCcccCCCccccceE
Confidence 0000 00000000 123444444 466666554 479
Q ss_pred EEEeccCCCceeeeecccc------ccCCCeEEEEEc-cCC---CEEEEeccCCcEEEEecCC
Q 022590 241 FVWELQSSPPVLIARLSHA------QSKSPIRQTAMS-YDG---STILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~~------~~~~~v~~~~~s-~~~---~~l~s~~~dg~i~vw~~~~ 293 (294)
.-+|.++++.+......+. ....++. +... .+| +.++.++.+|.++++|.++
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 9999999986665554411 0112232 2222 467 5677889999999998764
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.16 E-value=0.0011 Score=50.31 Aligned_cols=200 Identities=9% Similarity=-0.040 Sum_probs=115.6
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc-eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
...+++|. +.+..+..+-...+.|..++.+...... .+...-.....+++.+.++.++++-...+.|.++++.....
T Consensus 36 ~~~~ld~d--~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFV--FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEE--GGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEE--eCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 34566665 5433266666677889999987653222 22222345677888874566666666778999999865433
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeee-cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
...+. ........+++.|.++.++.+-. ..+.|...++.... ........-..
T Consensus 114 ~~l~~---~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-----------------------~~~~~~~~l~~ 167 (318)
T 3sov_A 114 KVLFW---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------RFIIINSEIYW 167 (318)
T ss_dssp EEEEC---SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSC
T ss_pred EEEEe---CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-----------------------eEEEEECCCCC
Confidence 33332 23456789999984555555442 35677777766411 00111111233
Q ss_pred eeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 168 VDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 168 i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
...++++ +. +.++=+..+.|..+|+..... ..+. .........+++..+ .++.+-...+.|..++
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-------~~~~--~~~~~~P~glav~~~---~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-------QAVV--KGSLPHPFALTLFED---ILYWTDWSTHSILACN 235 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEEE--CSCCSCEEEEEEETT---EEEEEETTTTEEEEEE
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-------EEEe--cCCCCCceEEEEeCC---EEEEEecCCCeEEEEE
Confidence 4566665 34 444445678899999864321 1111 122344566776433 3556666778899998
Q ss_pred ccCCC
Q 022590 245 LQSSP 249 (294)
Q Consensus 245 ~~~~~ 249 (294)
..+++
T Consensus 236 ~~~G~ 240 (318)
T 3sov_A 236 KYTGE 240 (318)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86654
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.002 Score=51.80 Aligned_cols=262 Identities=7% Similarity=-0.075 Sum_probs=134.1
Q ss_pred eeEEEEEeecC-CCceEEEEeecCCeEEEEEcCCccccceecc---cCcceEEEEe-------CCCCCceEEEeeCCC-c
Q 022590 10 SFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVG---HGDSINEIRT-------QPLKPSLVVSASKDE-S 77 (294)
Q Consensus 10 ~v~~~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---h~~~v~~~~~-------~~~~~~~l~s~~~dg-~ 77 (294)
.-..|+|. | ++..++++-...+.|++.|++++........ .......|+| ++ ++..|+.+...+ .
T Consensus 140 ~p~~la~d--p~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFD--PLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEE--TTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTT
T ss_pred CCCEEEEc--cCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCC
Confidence 34577776 6 3442555555557899999887766544332 1235899999 99 666555554443 2
Q ss_pred ------EEEEEcCC-CceE-----EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecc-------cccccccc
Q 022590 78 ------VRLWNVQT-GICI-----LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK-------EFWTYVEK 138 (294)
Q Consensus 78 ------i~vwd~~~-~~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~-------~~~~~~~~ 138 (294)
|.+.+... +... ..+.. . .....++++|.++.++++-..++.|..+|+. +..... .
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~t-p 291 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAA---Y-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWD-P 291 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEE---E-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCC-C
T ss_pred cccCceEEEEecCCCCceeecccceeecc---C-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeec-c
Confidence 55555333 2221 12221 1 1345788899667777777788889999987 211100 0
Q ss_pred ceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cce-EEEeeCCCeEEEecCCCCCCCCCCCCceeeeee---e-
Q 022590 139 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDF-ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY---P- 211 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~- 211 (294)
... .... ....+... ........++|+ ++. +++-.....|+.++......... ....+... .
T Consensus 292 ~~~-----~~~g---~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~--~~~~~aG~~g~~G 360 (496)
T 3kya_A 292 IVK-----NNPN---TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFI--TPYNFVGGYKQSG 360 (496)
T ss_dssp BGG-----GCTT---TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC--CCEEEEEBTTBCC
T ss_pred ccc-----cccc---ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceec--ccEEecCCCCCCc
Confidence 000 0000 00001111 112334567776 664 44445667888866532110000 00000000 0
Q ss_pred --------cCCCCee-EEEEc-------ccCCcceEEEEcCCCeEEEEeccCCCceeeeec-------------------
Q 022590 212 --------VPECDIW-FIKFS-------CDFHYNAAAIGNREGKIFVWELQSSPPVLIARL------------------- 256 (294)
Q Consensus 212 --------~~~~~i~-~~~~~-------~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------- 256 (294)
..-.... .+... +++ .+.++-.....|+.++. ++......-.
T Consensus 361 ~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g--~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 361 YRDDVGTEARMNNPCQGVFVKNPDYTGEEEY--DFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp CBCCBGGGCBCSSEEEEEEEECTTCCSSCCE--EEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred ccCCcccccccCCCeEEEEEccccccccCCC--eEEEEECCCCEEEEEeC-CCCEEEEecccccccccCccccccCCCCc
Confidence 0001233 34443 233 56666667888999983 3321111100
Q ss_pred cccccCCCeEEEEEccC-CCEEEEeccCCcEEEEecCC
Q 022590 257 SHAQSKSPIRQTAMSYD-GSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 257 ~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~vw~~~~ 293 (294)
.....-.....|+++++ |.+.++=..+..|+.++++.
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 00001234678999997 77777767788899998864
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.11 E-value=0.002 Score=51.25 Aligned_cols=200 Identities=9% Similarity=0.006 Sum_probs=108.0
Q ss_pred ceEEEEeCCC--CCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC---Cc-EEEEe
Q 022590 55 SINEIRTQPL--KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD---NT-VKIWS 128 (294)
Q Consensus 55 ~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d---g~-i~~wd 128 (294)
....|+|+|+ ++. |+.+...+.|+.+|..+++...... .......+++++ ++.++++.... .. +...+
T Consensus 140 ~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~~----~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKTT----NIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEECC----CCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEeec----CCCCccEEEECC-CCCEEEEcCCCCcccceEEEEE
Confidence 4578999983 344 4444444889999997776554432 445689999999 76755544321 11 22222
Q ss_pred ccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee---cceEEEeeCCCeEEEecCCCCCCCCCCCCce
Q 022590 129 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 205 (294)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 205 (294)
..... .. ..... .......++++ +.++++-..++.|+.+|..++.. ..
T Consensus 214 ~~~~~----------------~~---~~~~~----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~------~~ 264 (433)
T 4hw6_A 214 RASGF----------------TE---RLSLC----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL------TE 264 (433)
T ss_dssp GGGTT----------------CC---EEEEE----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE------EE
T ss_pred CCCCe----------------ec---ccccc----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE------EE
Confidence 21100 00 00011 11223344443 45555555678899999875531 00
Q ss_pred eeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCcee--eeeccc----c---------ccCCCeEEEEE
Q 022590 206 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL--IARLSH----A---------QSKSPIRQTAM 270 (294)
Q Consensus 206 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~----~---------~~~~~v~~~~~ 270 (294)
.+... ........++|+|+++ .+.++-...+.|+.++........ ...+.. . ..-.....+++
T Consensus 265 ~~~~~-~~~~~~~~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav 342 (433)
T 4hw6_A 265 EEVMM-DTKGSNFHIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIF 342 (433)
T ss_dssp EEEEC-SCCSSCEEEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEE
T ss_pred EEecc-CCCCCcccEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEE
Confidence 11111 1112234699999984 255555667899998876321101 001100 0 01123567999
Q ss_pred ---------ccCCCEEEEeccCCcEEEEec
Q 022590 271 ---------SYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 271 ---------s~~~~~l~s~~~dg~i~vw~~ 291 (294)
.++|.+.++-...+.|+.++.
T Consensus 343 ~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 343 VKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EccccccccCCCCcEEEEECCCCEEEEECC
Confidence 777777777777788888763
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.11 E-value=0.0015 Score=49.66 Aligned_cols=200 Identities=13% Similarity=0.202 Sum_probs=116.5
Q ss_pred CceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCC----c---eEEeee-c--CCcEEEEeccccccc
Q 022590 66 PSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI----Y---RIASCG-M--DNTVKIWSMKEFWTY 135 (294)
Q Consensus 66 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~----~---~l~~~~-~--dg~i~~wd~~~~~~~ 135 (294)
..+++.....+-+.+||+ +|+.+..+. . +.++.+..-| +- . ++++.. . +++|.+|++......
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~----~-g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN----T-GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC----C-SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc----C-CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 345666677788999999 899888875 2 5677777766 21 1 233333 3 578999987421110
Q ss_pred cccceeecCCCCCCCCceeeeceEEeecCCCceeecce--e---cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeee
Q 022590 136 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW--L---GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQK 209 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 209 (294)
+...... ..++ ..-...+..+++ + +. ++++...+|.+..|++...... ....+.+++
T Consensus 113 ----l~~i~~~--------~~pv---~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g--~~~~~lVR~ 175 (355)
T 3amr_A 113 ----LQSMTDP--------DHPI---ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG--YISGKKVRA 175 (355)
T ss_dssp ----EEECSCT--------TSCE---ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS--CEEEEEEEE
T ss_pred ----eeecccc--------ccCc---CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC--cccceEEEE
Confidence 0000000 0000 000133333444 2 32 6778888899999998532110 013346677
Q ss_pred eecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC---ceeeeeccccccCCCeEEEEE--ccCCC-EEEEec-c
Q 022590 210 YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP---PVLIARLSHAQSKSPIRQTAM--SYDGS-TILSCC-E 282 (294)
Q Consensus 210 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~~v~~~~~--s~~~~-~l~s~~-~ 282 (294)
+... ..+..+...+.. ..|+.+-++..|..++.+... ...+...........+..|++ .++++ ||++++ .
T Consensus 176 f~lg-sq~EgcvvDd~~--g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 176 FKMN-SQTEGMAADDEY--GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp EECS-SCEEEEEEETTT--TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred ecCC-CCcceEEEcCCC--CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 7664 467788888766 488889888777777755322 223333322223346888888 45555 666665 6
Q ss_pred CCcEEEEecC
Q 022590 283 DGAIWRWDAI 292 (294)
Q Consensus 283 dg~i~vw~~~ 292 (294)
+....+||.+
T Consensus 253 ~~s~~Vydr~ 262 (355)
T 3amr_A 253 NSSYAIYDRQ 262 (355)
T ss_dssp GTEEEEEESS
T ss_pred CCEEEEEECC
Confidence 6789999986
No 293
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.00034 Score=59.97 Aligned_cols=195 Identities=12% Similarity=0.104 Sum_probs=96.8
Q ss_pred ceEEEEeC-CCCCceEEEee-CCC----cEEEEEcCCC-ceEEE-eeccCCCCCceeEEEEecCCCceEEeeecC-----
Q 022590 55 SINEIRTQ-PLKPSLVVSAS-KDE----SVRLWNVQTG-ICILI-FAGAGGHRNEVLSVDFHPSDIYRIASCGMD----- 121 (294)
Q Consensus 55 ~v~~~~~~-~~~~~~l~s~~-~dg----~i~vwd~~~~-~~~~~-~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d----- 121 (294)
.+...+|| | ++++|+-+. .+| +|+++|+.++ +.+.. +. .....+.|+| ++..|+....|
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~------~~~~~~~Wsp-Dg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS------GTNGEIVWGP-DHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE------EECSCCEECS-STTEEEEEEECTTCCE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc------CceeeEEEec-CCCEEEEEEECCCCCC
Confidence 67889999 9 777766443 233 5999999988 63211 11 1235788999 66666665554
Q ss_pred CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEee-cCCCceeeccee--cceEEEee---CCCeEEEecCCCC
Q 022590 122 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL--GDFILSKS---VDNEIVLWEPKMK 195 (294)
Q Consensus 122 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--~~~l~~~~---~d~~i~iwd~~~~ 195 (294)
..|.++++.+.... ....+. ........+.|+ +++|+..+ ....|.++|+.++
T Consensus 247 ~~v~~~~lgt~~~~---------------------~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 247 NKVWRHVMGKLQSE---------------------DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEETTSCGGG---------------------CEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CEEEEEECCCCchh---------------------cEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 25677777652110 011111 122233445554 66666544 2346888888765
Q ss_pred CCCCCCCCceeeeee-ecCCCCeeEEEEcccCCcceEEEEcCC----CeEEEEeccCC-CceeeeeccccccCCCeEEEE
Q 022590 196 EQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNRE----GKIFVWELQSS-PPVLIARLSHAQSKSPIRQTA 269 (294)
Q Consensus 196 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~-~~~~~~~~~~~~~~~~v~~~~ 269 (294)
... . .+..+ ...........|+. ++ .+++....+ ..|..+++.+. +.... .+.+ .....+..+.
T Consensus 306 ~~~-----~-~~~~l~~~~~~~~~s~~~~~-g~-~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~-li~~-~~~~~l~~~~ 375 (751)
T 2xe4_A 306 NAH-----N-TLEIVRPREKGVRYDVQMHG-TS-HLVILTNEGGAVNHKLLIAPRGQPSDWSHV-LVDH-SEDVFMESIA 375 (751)
T ss_dssp TTC-----C-CEEESSCCCTTCCEEEEEET-TT-EEEEEECTTTCTTCEEEEEETTSTTCCCCE-EECC-CSSEEEEEEE
T ss_pred CCC-----c-eeEEeecCCCCceEEEeeee-CC-EEEEEeCCCCCCCcEEEEEcCCCcccceee-EECC-CCCcEEEEEE
Confidence 210 0 00111 11223334444333 43 344444333 35666776542 21110 1211 1111345555
Q ss_pred EccCCCEEEEeccCCcEEEE
Q 022590 270 MSYDGSTILSCCEDGAIWRW 289 (294)
Q Consensus 270 ~s~~~~~l~s~~~dg~i~vw 289 (294)
+. .+.++++...+|..++|
T Consensus 376 ~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 376 VR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EC-SSEEEEEEEETTEEEEE
T ss_pred EE-CCEEEEEEEeCCEEEEE
Confidence 54 23455566777764444
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.0059 Score=50.98 Aligned_cols=221 Identities=7% Similarity=-0.099 Sum_probs=117.6
Q ss_pred CCeEEEEEcCCcc-ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecC
Q 022590 32 NGIIRVIDVSNEK-LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 110 (294)
Q Consensus 32 dg~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 110 (294)
...|+..++.... ....+...-..+..|+|++.++.++++=...+.|..+++........+.. .--.....|++.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~--~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--SGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC--SSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe--CCCCCcCeEEEEec
Confidence 4679999987653 22222223456789999985555555555578888888865432222221 12246889999985
Q ss_pred CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEee--CCCe
Q 022590 111 DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS--VDNE 186 (294)
Q Consensus 111 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~--~d~~ 186 (294)
+++++++-...+.|.+.++.... ........-.....++++ +..|+.+. ..+.
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~-----------------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~ 151 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSL-----------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK 151 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCS-----------------------CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCE
T ss_pred CCEEEEEeCCCCEEEEEECCCCC-----------------------EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCE
Confidence 66666666778899999987621 111111222334456664 23343333 2356
Q ss_pred EEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeE
Q 022590 187 IVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIR 266 (294)
Q Consensus 187 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 266 (294)
|...++..... .............+++.++.. .+.++-...+.|..+|+.......... .......
T Consensus 152 I~r~~~dG~~~---------~~l~~~~~~~P~Glald~~~~-~LY~aD~~~~~I~~~~~dG~~~~~~~~----~~~~~P~ 217 (619)
T 3s94_A 152 IERAGMDGSSR---------FIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSNLDGTNRQAVVK----GSLPHPF 217 (619)
T ss_dssp EEEEETTSCSC---------EEEECSSCSSEEEEEEETTTT-EEEEEETTTCCEEEESSSCCEEC-------------CC
T ss_pred EEEEECCCCce---------EEEEeCCCCCCcEEEEEccCC-EEEEEeCCCCeEEEecCCCCccEEEEe----CCCCCce
Confidence 66666653321 111112234577899998764 455555667889999987653222211 0111234
Q ss_pred EEEEccCCCEEEEeccCCcEEEEecC
Q 022590 267 QTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 267 ~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
.+++..+ ....+-...+.|...|..
T Consensus 218 gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 218 ALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp CEEESSS-EEEEECTTTCSEEEEESS
T ss_pred EEEEeCC-EEEEecCCCCEEEEEECC
Confidence 5677655 444444456677777653
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0045 Score=49.26 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=69.4
Q ss_pred eeEEEEEeecCCCceEEEEeec-CC----eEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGI-NG----IIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 82 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 82 (294)
....++|. ++|+ +|+.+.. ++ .+.+.+. .+... ..+.. ......++++|.++.++++-..++.|..++
T Consensus 180 ~P~~ia~d--~~G~-~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~ 254 (430)
T 3tc9_A 180 KVRTICWT--HEAD-SMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYD 254 (430)
T ss_dssp CEEEEEEC--TTSS-EEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEE
T ss_pred CcceEEEe--CCCC-EEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEE
Confidence 34566665 8887 5555443 22 2333443 33322 22222 234577889995666666666778999999
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCc-eEEeeecCCcEEEEeccc
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKE 131 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-~l~~~~~dg~i~~wd~~~ 131 (294)
...+........ +.......|+|+| +++ ++++-...+.|..++...
T Consensus 255 ~~~~~~~~~~~~--~~~~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 255 FTTQETTPLFTI--QDSGWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEC--SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCcEEEEEEc--CCCCcceeEEEcC-CCCEEEEEECCCCEEEEEeCCc
Confidence 976654333321 1224578999999 666 556666778899988764
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.94 E-value=0.0097 Score=53.42 Aligned_cols=220 Identities=12% Similarity=0.049 Sum_probs=124.1
Q ss_pred CeEEEEEcCCccccceecc-cCcceEEEE---eCCCCCceEEEee----------CCCcEEEEEcCCCceEEEeeccCCC
Q 022590 33 GIIRVIDVSNEKLHKSFVG-HGDSINEIR---TQPLKPSLVVSAS----------KDESVRLWNVQTGICILIFAGAGGH 98 (294)
Q Consensus 33 g~i~iw~~~~~~~~~~~~~-h~~~v~~~~---~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~~~~ 98 (294)
+.|++.|..+.+.+..+.- ....+.+++ |......+|+.|+ ..|.|.++++..++.....+. ..
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~--~v 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK--EV 884 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE--EE
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE--Ec
Confidence 4688888887776655542 233455544 4432356888876 357899999975433322222 35
Q ss_pred CCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC-ceeecceecce
Q 022590 99 RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN-YVDCNRWLGDF 177 (294)
Q Consensus 99 ~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 177 (294)
+++|++++-- ++.++++ ...++++|++...+.. . .....+.. .+..+...+++
T Consensus 885 ~g~v~al~~~--~g~Lla~--ig~~l~vy~l~~~~~L-------------------~---~~~~~~~~i~~~~l~~~~~~ 938 (1158)
T 3ei3_A 885 KGAVYSMVEF--NGKLLAS--INSTVRLYEWTTEKEL-------------------R---TECNHYNNIMALYLKTKGDF 938 (1158)
T ss_dssp SSCEEEEEEE--TTEEEEE--ETTEEEEEEECTTSCE-------------------E---EEEEECCCSCEEEEEEETTE
T ss_pred CCcCEEEeee--CCEEEEE--cCCEEEEEECCCCceE-------------------E---EEeeccccEEEEEEeccCCE
Confidence 7889998865 4554443 3479999999862110 0 00111111 12234444889
Q ss_pred EEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCce-----e
Q 022590 178 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV-----L 252 (294)
Q Consensus 178 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~ 252 (294)
+++|..-..+.++..+.... ....+ .-......++++.+-.+. .++.++.+|.+.+......... .
T Consensus 939 I~vgD~~~Sv~~~~y~~~~~-----~L~~~-a~D~~~~~vta~~~ld~~---t~l~aD~~gNl~vl~~~~~~~~~~~~~~ 1009 (1158)
T 3ei3_A 939 ILVGDLMRSVLLLAYKPMEG-----NFEEI-ARDFNPNWMSAVEILDDD---NFLGAENAFNLFVCQKDSAATTDEERQH 1009 (1158)
T ss_dssp EEEEESSBCEEEEEEETTTT-----EEEEE-EECCSCBCEEEEEEEETT---EEEEEETTSEEEEEEECTTCCSTTGGGB
T ss_pred EEEEEhhheEEEEEEEcCCC-----eEEEE-EeecccccEEEEEEEccC---cEEEEcCCCcEEEEecCCCCCCccccce
Confidence 99988877777655432211 11111 122334567777776554 6788999999999987653210 1
Q ss_pred eeeccccccCCCeEEEE---EccC---------CCEEEEeccCCcEEEE
Q 022590 253 IARLSHAQSKSPIRQTA---MSYD---------GSTILSCCEDGAIWRW 289 (294)
Q Consensus 253 ~~~~~~~~~~~~v~~~~---~s~~---------~~~l~s~~~dg~i~vw 289 (294)
......-.....|+++. +.+. ...++-++.+|.|.+.
T Consensus 1010 L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1010 LQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred eeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 11111112235677765 3332 2347778889988764
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.93 E-value=0.0033 Score=47.27 Aligned_cols=193 Identities=10% Similarity=0.048 Sum_probs=95.6
Q ss_pred CCceEEEEeecC-----CeEEEEEcCCcc---cc--ceecccCcceEEEEeCCCCCceEEEeeCC-----CcEEEEEcCC
Q 022590 21 DGIPFLVAGGIN-----GIIRVIDVSNEK---LH--KSFVGHGDSINEIRTQPLKPSLVVSASKD-----ESVRLWNVQT 85 (294)
Q Consensus 21 ~~~~~l~~~~~d-----g~i~iw~~~~~~---~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~ 85 (294)
++. +++.|+.+ ..+.+||..+.+ -. ..+......-..+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 62 ~~~-l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDR-IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTE-EEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCE-EEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCC
Confidence 455 77777755 468899987765 21 122211112222222 45777777654 3578889877
Q ss_pred CceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-----CcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 86 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
.+-...-.. .....-.++... ++.+++.|+.+ ..+.+||+.+..-.. .+ .
T Consensus 138 ~~W~~~~~~--p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~--------~~-------------~ 192 (301)
T 2vpj_A 138 DQWSMLGDM--QTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN--------VT-------------P 192 (301)
T ss_dssp TEEEEEEEC--SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE--------EC-------------C
T ss_pred CeEEECCCC--CCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe--------CC-------------C
Confidence 654332221 111111222232 56777777765 357788877632110 00 0
Q ss_pred eecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc
Q 022590 161 ASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 235 (294)
Q Consensus 161 ~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 235 (294)
.........++.+++.+++.|+.+ ..+.+||+.+.+ ...+...+........+ ..++ .+++.|+
T Consensus 193 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~--~~~~--~i~v~GG 261 (301)
T 2vpj_A 193 MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS-------WTTVTSMTTPRCYVGAT--VLRG--RLYAIAG 261 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEE--EETT--EEEEECC
T ss_pred CCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc-------EEECCCCCCcccceeEE--EECC--EEEEEcC
Confidence 000111112223346677777664 468899987653 12222222222112222 2244 4666666
Q ss_pred CC-----CeEEEEeccCCCceee
Q 022590 236 RE-----GKIFVWELQSSPPVLI 253 (294)
Q Consensus 236 ~d-----g~i~i~d~~~~~~~~~ 253 (294)
.+ ..+.+||+++.+....
T Consensus 262 ~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp BCSSSBEEEEEEEETTTTEEEEE
T ss_pred cCCCcccccEEEEcCCCCeEEEc
Confidence 54 4578888887654333
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.91 E-value=0.0038 Score=47.54 Aligned_cols=199 Identities=11% Similarity=0.098 Sum_probs=116.5
Q ss_pred EEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCC----Cc---eEEEee-C--CCcEEEEEcC--CCceEEEe
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLK----PS---LVVSAS-K--DESVRLWNVQ--TGICILIF 92 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~---~l~s~~-~--dg~i~vwd~~--~~~~~~~~ 92 (294)
+++.....+-+.+||+ +++.++.+.. +.++.+..-| + ++ ++++.. . +++|++|++. ++. +..+
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i 116 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM 116 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence 6777777889999999 8888888764 5566666655 2 11 233333 3 5789999773 333 4444
Q ss_pred ecc--C-CCC-CceeEEEE--ecCCC-ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 93 AGA--G-GHR-NEVLSVDF--HPSDI-YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 93 ~~~--~-~~~-~~v~~l~~--~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
... . +.. ..+..+++ +|..+ .++++...+|.+..|++...... ......+..+.. .
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g----------------~~~~~lVR~f~l-g 179 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG----------------YISGKKVRAFKM-N 179 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS----------------CEEEEEEEEEEC-S
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC----------------cccceEEEEecC-C
Confidence 210 0 011 56777888 66334 36888888999999999641100 000222333332 3
Q ss_pred Cceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec--CCCCeeEEEE--cccCCcceEEEEcCCCe
Q 022590 166 NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV--PECDIWFIKF--SCDFHYNAAAIGNREGK 239 (294)
Q Consensus 166 ~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~--~~~~~~~~l~~~~~dg~ 239 (294)
..+..+..+ ...|+.+-++..|..++.+..... ....+..... -...+..|++ .+++.+.+++++-.++.
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~----~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGS----NGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCS----CCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCC----CceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 456666665 568888888877777774422100 1123333321 1235778887 45554334555557789
Q ss_pred EEEEecc-CCC
Q 022590 240 IFVWELQ-SSP 249 (294)
Q Consensus 240 i~i~d~~-~~~ 249 (294)
..+||.+ +.+
T Consensus 256 ~~Vydr~~~~~ 266 (355)
T 3amr_A 256 YAIYDRQGKNK 266 (355)
T ss_dssp EEEEESSTTCC
T ss_pred EEEEECCCCCc
Confidence 9999997 444
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.90 E-value=0.0038 Score=47.12 Aligned_cols=176 Identities=5% Similarity=-0.106 Sum_probs=96.5
Q ss_pred CCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecce---e
Q 022590 98 HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW---L 174 (294)
Q Consensus 98 ~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~ 174 (294)
......++.|++.++.++++.-..++|..||......... ........ ......+..+.| +
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~-------------g~~~~~~sGl~~~~~D 74 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSN-------------GDGEQQMSGLSLLTHD 74 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCS-------------SCCSEEEEEEEESSSS
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE---ecCCcccc-------------CCCcceeeEEEEeccC
Confidence 4445678999985566555555799999999874211100 00000000 000012245555 2
Q ss_pred --cceEEEee-------------CCCeEEEecCC---CCCCCCCCCCceeeee---eec-CCCCeeEEEEcccCCcceEE
Q 022590 175 --GDFILSKS-------------VDNEIVLWEPK---MKEQSPGEGTADILQK---YPV-PECDIWFIKFSCDFHYNAAA 232 (294)
Q Consensus 175 --~~~l~~~~-------------~d~~i~iwd~~---~~~~~~~~~~~~~~~~---~~~-~~~~i~~~~~~~~~~~~~l~ 232 (294)
+.++++.. .+..+..||+. +++............. ... .......++..++| +..+
T Consensus 75 ~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G--naYV 152 (334)
T 2p9w_A 75 NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG--NSYV 152 (334)
T ss_dssp SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS--CEEE
T ss_pred CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC--CEEE
Confidence 44444332 26789999998 5543110000000000 000 11236778888888 5667
Q ss_pred EEcCC-CeEEEEeccCCCceeeeeccc--cccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 233 IGNRE-GKIFVWELQSSPPVLIARLSH--AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 233 ~~~~d-g~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+++.. +.|..++...... ....... .......+.|+++|+|+.|++...+|.|..+|++
T Consensus 153 t~s~~~~~I~rV~pdG~~~-~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTV-STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEESSCEEEEECTTSCCE-EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eCCCCCCeEEEEeCCCCEE-eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 67777 7777777665422 2111111 1223447899999999988888779999999875
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.0078 Score=50.37 Aligned_cols=223 Identities=6% Similarity=-0.136 Sum_probs=130.9
Q ss_pred EEEEeecCCeEEEEEcCCccccceec-ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCcee
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFV-GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 103 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 103 (294)
+|+.+ ..+.|+..++++......+. ..-..+..|+|++.++.++++-..++.|..+++........+. .-.....
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~---~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE---FGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---SSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe---CCCCCcc
Confidence 44444 45689999998755433322 1234678999999556666666678899999986554433333 1224577
Q ss_pred EEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCceeeccee--cceEEEe
Q 022590 104 SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSK 181 (294)
Q Consensus 104 ~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~ 181 (294)
.|++.+.+++++++-...+.|.+.++..... .......-.....++++ ...|+..
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-----------------------~~l~~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-----------------------QVLVWKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTC-----------------------EEEECSSCCCEEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcE-----------------------EEEEeCCCCCcccEEEccCCCeEEEe
Confidence 8999875667667767778899998875211 00111112233555555 2334433
Q ss_pred e--CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecccc
Q 022590 182 S--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 259 (294)
Q Consensus 182 ~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 259 (294)
. ..+.|...++..... ..+.........+++.+++. .+..+-...+.|..+|+........ .
T Consensus 141 D~g~~~~I~r~~~dG~~~----------~~l~~~~~~P~GlalD~~~~-~LY~aD~~~~~I~~~d~dG~~~~v~---~-- 204 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSER----------TTLVPNVGRANGLTIDYAKR-RLYWTDLDTNLIESSNMLGLNREVI---A-- 204 (628)
T ss_dssp ECSSSCEEEEEETTSCSC----------EEEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEE---E--
T ss_pred CCCCCCEEEEEeCCCCce----------EEEECCCCCcceEEEccccC-EEEEEECCCCEEEEEcCCCCceEEe---e--
Confidence 3 246777777654321 11112345678899999764 4455556678899999977543221 1
Q ss_pred ccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 260 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 260 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
........+++.. +.+..+-...+.|...|.
T Consensus 205 ~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 205 DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp ECCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred ccCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 1112345777765 444445455677777764
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.87 E-value=0.0043 Score=46.79 Aligned_cols=196 Identities=9% Similarity=0.040 Sum_probs=97.4
Q ss_pred CCceEEEEeecC----CeEEEEEcCCccccc--eecccCcceEEEEeCCCCCceEEEeeCC------CcEEEEEcCCCce
Q 022590 21 DGIPFLVAGGIN----GIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLVVSASKD------ESVRLWNVQTGIC 88 (294)
Q Consensus 21 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~ 88 (294)
++. +++.|+.+ ..+.+||..+++-.. .+......-..+.+ ++.+++.|+.+ ..+.+||..+.+-
T Consensus 55 ~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 455 77777754 678889987764322 22211111222222 45777777765 4588899887654
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeec---------CCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM---------DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~---------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
... ... .....-.++... ++.+++.|+. -..+.+||+.+..-. ..+
T Consensus 131 ~~~-~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~--------~~~------------- 185 (306)
T 3ii7_A 131 HTK-PSM-LTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT--------ELC------------- 185 (306)
T ss_dssp EEE-CCC-SSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEE--------EEC-------------
T ss_pred EeC-CCC-cCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEE--------ECC-------------
Confidence 332 211 111111222232 5677777764 344778888763211 000
Q ss_pred EeecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 160 IASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
........-.++...+.+++.|+.+ ..+.+||+.+.+ ...+...+........+.+ ++ .+++.|
T Consensus 186 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~--~i~v~G 254 (306)
T 3ii7_A 186 PMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE-------WKMVSPMPWKGVTVKCAAV--GS--IVYVLA 254 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE-------EEECCCCSCCBSCCEEEEE--TT--EEEEEE
T ss_pred CccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc-------EEECCCCCCCccceeEEEE--CC--EEEEEe
Confidence 0000011111222236666666653 458889987653 1122222222222222222 33 466777
Q ss_pred cCC-----CeEEEEeccCCCceeeeec
Q 022590 235 NRE-----GKIFVWELQSSPPVLIARL 256 (294)
Q Consensus 235 ~~d-----g~i~i~d~~~~~~~~~~~~ 256 (294)
+.+ ..+.+||+.+.+......+
T Consensus 255 G~~~~~~~~~~~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 255 GFQGVGRLGHILEYNTETDKWVANSKV 281 (306)
T ss_dssp CBCSSSBCCEEEEEETTTTEEEEEEEE
T ss_pred CcCCCeeeeeEEEEcCCCCeEEeCCCc
Confidence 643 5688999988765444433
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.84 E-value=0.0052 Score=46.90 Aligned_cols=232 Identities=9% Similarity=0.029 Sum_probs=116.3
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec---ccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcC
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV---GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 84 (294)
...+.++.+. + +. .++ ++..|.|.. ..+.++.-.... .+...+..+.+.+ ++..++++ .+|.|.. ..+
T Consensus 79 ~~~~~~i~~~--~-~~-~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~D 149 (327)
T 2xbg_A 79 DYRFNSVSFQ--G-NE-GWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYR-TKD 149 (327)
T ss_dssp CCEEEEEEEE--T-TE-EEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEE-ESS
T ss_pred CccEEEEEec--C-Ce-EEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEE-EcC
Confidence 4478888875 5 44 444 455665544 333343322221 2335577888776 55555554 4564422 223
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEE-EeccccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI-WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
.++.-..... +....+..+.+.| ++.+++++. +|.+.. .|-.. .. -.++ ...
T Consensus 150 gG~tW~~~~~--~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG-~t--------------------W~~~--~~~ 202 (327)
T 2xbg_A 150 SGKNWQALVQ--EAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQ-TA--------------------WEPH--NRT 202 (327)
T ss_dssp TTSSEEEEEC--SCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTC-SS--------------------CEEE--ECC
T ss_pred CCCCCEEeec--CCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCC-Cc--------------------eeEC--CCC
Confidence 3544444432 3566789999998 777666554 454433 33211 00 0000 011
Q ss_pred CCCceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeec----CCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 164 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV----PECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 164 ~~~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
....+..+.+. ...++.++.+|.+++.+...++ ....... ....+..+.+.+++ .+++++ .+|
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~---------tW~~~~~~~~~~~~~~~~v~~~~~~--~~~~~g-~~g 270 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSE---------NWGELLSPLRRNSVGFLDLAYRTPN--EVWLAG-GAG 270 (327)
T ss_dssp SSSCEEEEEECTTSCEEEEETTTEEEEEETTEEE---------EECCCBCTTSSCCSCEEEEEESSSS--CEEEEE-STT
T ss_pred CCCccceeEECCCCCEEEEeCCceEEEecCCCCC---------eeEeccCCcccCCcceEEEEecCCC--EEEEEe-CCC
Confidence 23344555554 3345555667887776322111 0111111 12347778888765 455554 466
Q ss_pred eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 239 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 239 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
.+ ++..+.++. .............+.++.|.+++. ++.++.+|.|.-++
T Consensus 271 ~i-~~S~DgG~t-W~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 271 AL-LCSQDGGQT-WQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CE-EEESSTTSS-CEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred eE-EEeCCCCcc-cEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 66 344444431 221111111234578888876554 55666889776654
No 303
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.84 E-value=0.0052 Score=46.60 Aligned_cols=226 Identities=9% Similarity=0.001 Sum_probs=107.5
Q ss_pred EEEEeecCCeEEEEEcCCccccc-eecccCcceEEEEeCCCCCceEEEeeC----C-------CcEEEEEcCCCceEEEe
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASK----D-------ESVRLWNVQTGICILIF 92 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~----d-------g~i~vwd~~~~~~~~~~ 92 (294)
+++.|+ ..+.+||..+++-.. .+..........+... ++.+++.|+. + ..+..||..+++-.. +
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-M 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-C
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-C
Confidence 455665 579999998876322 1111111222222233 5677777773 1 126778887765322 2
Q ss_pred eccCCCCCceeEEEEecCCCceEEeeecC--------CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 93 AGAGGHRNEVLSVDFHPSDIYRIASCGMD--------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 93 ~~~~~~~~~v~~l~~~~~~~~~l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
... .....-.+++.. ++.+++.|+.+ ..+.+||+.+..- ...+. +...
T Consensus 83 ~~~-p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W--------~~~~~-------------~p~~ 138 (315)
T 4asc_A 83 PPL-PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW--------GESDP-------------LPYV 138 (315)
T ss_dssp CCB-SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEE--------EECCC-------------CSSC
T ss_pred CCC-CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcE--------eECCC-------------CCCc
Confidence 211 011111122232 56777777743 3578888776321 11000 0001
Q ss_pred CCceeecceecceEEEeeC-C-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 165 SNYVDCNRWLGDFILSKSV-D-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 165 ~~~i~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
...-.++...+.+++.|+. + ..+.+||+.+.+ ...+...+........+ ..++ .+++.|+.++
T Consensus 139 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~--~~~~--~iyv~GG~~~ 207 (315)
T 4asc_A 139 VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE-------WKELAPMQTARSLFGAT--VHDG--RIIVAAGVTD 207 (315)
T ss_dssp CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE-------EEECCCCSSCCBSCEEE--EETT--EEEEEEEECS
T ss_pred ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe-------EEECCCCCCchhceEEE--EECC--EEEEEeccCC
Confidence 1111122234666677765 2 468889987653 11121122111111222 2233 4666665543
Q ss_pred -----eEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCC--------------cEEEEecCC
Q 022590 239 -----KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG--------------AIWRWDAIP 293 (294)
Q Consensus 239 -----~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--------------~i~vw~~~~ 293 (294)
.+.+||+.+.+........ .....-..+. -++++++.|+.++ .+.+||+++
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAFP--QERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCCS--SCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred CCccceEEEEECCCCeEEECCCCC--CcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 5888999887544433322 1111122222 2667777777642 366777654
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.77 E-value=0.0066 Score=45.84 Aligned_cols=173 Identities=9% Similarity=-0.019 Sum_probs=96.4
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEE-eecc---CCCCCceeEEEE---ecCCCceEEeeec-------
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILI-FAGA---GGHRNEVLSVDF---HPSDIYRIASCGM------- 120 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~---~~~~~~v~~l~~---~~~~~~~l~~~~~------- 120 (294)
--.+++|.+.++.++++.-..++|..|+...+..... +... ......+..|.| .| ++.++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEccccccccc
Confidence 3457889885565666655899999999976644333 2110 001124689999 68 6777765431
Q ss_pred ------CCcEEEEecc---ccccccccceeecCCCCCCCCceeeeceEEeec-CCCceeeccee--cceEEEeeCC-CeE
Q 022590 121 ------DNTVKIWSMK---EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKSVD-NEI 187 (294)
Q Consensus 121 ------dg~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~~d-~~i 187 (294)
+..+..+|+. +.+......+... ........+ -......+..+ |+..++++.. +.|
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~-----------~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKV-----------QDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHH-----------HHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccc-----------cccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 6779999988 4221110000000 000000000 01124455554 7888888877 887
Q ss_pred EEecCCCCCCCCCCCCceeeeee--ecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC
Q 022590 188 VLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 247 (294)
Q Consensus 188 ~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 247 (294)
...+...... ....... .......+.+++.|++. .|++....|.+..+|+..
T Consensus 162 ~rV~pdG~~~------~~~~~~~~~~~~~~G~nGIv~~pdg~--~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 162 ARVSADGKTV------STFAWESGNGGQRPGYSGITFDPHSN--KLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEECTTSCCE------EEEEECCCCSSSCCSCSEEEEETTTT--EEEEESSSSSEEEEECSS
T ss_pred EEEeCCCCEE------eeeeecCCCcccccCcceEEEeCCCC--EEEEEcCCCeEEEEcCCC
Confidence 7777654321 0000011 11223477899999994 565555599999999984
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.73 E-value=0.015 Score=48.66 Aligned_cols=200 Identities=9% Similarity=-0.024 Sum_probs=106.4
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccc-cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
...+++|. +.+..++.+-...+.|..++++.... ...+...-.....|++.+.+++++++-...+.|.+.++.....
T Consensus 41 ~~~~ld~~--~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFV--FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEE--TTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEE--eCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 45567776 64542455555567888888765432 2223322356789999885556666666788999999865443
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeee-cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCc
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 167 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
...+. ..-.....|++.|.++.++++-- ..+.|...++.... ........-..
T Consensus 119 ~~l~~---~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-----------------------~~~l~~~~~~~ 172 (619)
T 3s94_A 119 KVLFW---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------RFIIINSEIYW 172 (619)
T ss_dssp EEEEC---SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSS
T ss_pred EEEEe---CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-----------------------eEEEEeCCCCC
Confidence 33332 23445789999995566555542 23566666655311 01111112233
Q ss_pred eeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 168 VDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 168 i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
...++++ +. +.++=...+.|..+|+....... ... ........+++..+ .+..+-...+.|...|
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~------~~~---~~~~~P~gi~~~~~---~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA------VVK---GSLPHPFALTLFED---ILYWTDWSTHSILACN 240 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CCCEEESSS---EEEEECTTTCSEEEEE
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEE------EEe---CCCCCceEEEEeCC---EEEEecCCCCEEEEEE
Confidence 4556665 33 44444456778888886533211 111 01112234555443 2455555667788888
Q ss_pred ccCCC
Q 022590 245 LQSSP 249 (294)
Q Consensus 245 ~~~~~ 249 (294)
..+++
T Consensus 241 ~~tg~ 245 (619)
T 3s94_A 241 KYTGE 245 (619)
T ss_dssp SSSCC
T ss_pred CCCCc
Confidence 76553
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.72 E-value=0.0078 Score=45.24 Aligned_cols=218 Identities=15% Similarity=0.158 Sum_probs=122.6
Q ss_pred CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCC
Q 022590 33 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 112 (294)
Q Consensus 33 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 112 (294)
.+|.|.|+.++..+.+-.-. --+.-.+| ..+.+|.-. ..++.++|+++.+.++.+. ....|.--.|- +.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP-~~~ViALra-g~~LQiFnletK~klks~~----~~e~VvfWkWi--s~ 117 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPIS---ADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT----MTDDVTFWKWI--SL 117 (365)
T ss_dssp EEEEEEETTSTTSCEEEECC---CSEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEE----CSSCEEEEEEC--SS
T ss_pred CEEEEEECCCCCCccccccc---cceeeeCC-CccEEEEec-CCeEEEechHHhhhhccee----cCCccEEEEec--CC
Confidence 37888888876554222111 11233478 666666654 6889999999999998887 56788888887 44
Q ss_pred ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC----ceeeccee--cceEEEee----
Q 022590 113 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN----YVDCNRWL--GDFILSKS---- 182 (294)
Q Consensus 113 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~--~~~l~~~~---- 182 (294)
+.|+-.+ +..|+-|++... ..|...+..|.. .|.....+ .++++..+
T Consensus 118 ~~L~lVT-~taVyHWs~~~~----------------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 174 (365)
T 2xzh_A 118 NTVALVT-DNAVYHWSMEGE----------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 174 (365)
T ss_dssp SEEEEEE-SSEEEEEESSTT----------------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEE
T ss_pred CeEEEEc-CCcEEEEcccCC----------------------CCCceeeecchhcccceEEEEEECCCCCEEEEEeEecc
Confidence 5566555 458999998751 122333333221 12221112 34444332
Q ss_pred ---CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc---CCCeEEEEeccCC---Cceee
Q 022590 183 ---VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN---REGKIFVWELQSS---PPVLI 253 (294)
Q Consensus 183 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~---~~~~~ 253 (294)
-.|.+.+|..+.......+++......+......- . ..+++.+. ..+.+++.++... .+...
T Consensus 175 ~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~--------~-~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~ 245 (365)
T 2xzh_A 175 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE--------E-STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP 245 (365)
T ss_dssp TTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSS--------C-EEEEEEEEEETTEEEEEEEECSSCCTTCCCCC
T ss_pred CCccceeEEEEeecccccceeeeeeeeeEEEecCCCCC--------C-ceEEEEEEecCCCcEEEEEEcCCCCCCCCCcc
Confidence 23678999987664322222222222222211110 0 01222222 2368999998543 11111
Q ss_pred e-----eccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 254 A-----RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 254 ~-----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
. .++......--.++..++.-..+..-+.-|.|++||+++
T Consensus 246 kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 246 KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 290 (365)
T ss_dssp CEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred cccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEccc
Confidence 1 111222234456788888888888899999999999986
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.71 E-value=0.0083 Score=45.11 Aligned_cols=234 Identities=10% Similarity=0.113 Sum_probs=132.4
Q ss_pred cCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC-CceEEEeeccCC
Q 022590 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT-GICILIFAGAGG 97 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~ 97 (294)
+|..+ .+|.-. ..++.|+|+++.+.++.+.- ...|.-=.|-. .+.|+-.+. ..|.-|++.. ..+.+.|.....
T Consensus 75 nP~~~-ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis--~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 75 NPASK-VIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp CSSSS-EEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS--SSEEEEEES-SEEEEEESSTTCCCEEEEECCGG
T ss_pred CCCcc-EEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC--CCeEEEEcC-CcEEEEcccCCCCCceeeecchh
Confidence 57776 666655 67999999999988888775 45677777764 345555544 5799999974 355556653110
Q ss_pred -CCCceeEEEEecCCCceEEeee-------cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 98 -HRNEVLSVDFHPSDIYRIASCG-------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 98 -~~~~v~~l~~~~~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
....|..-..++ +...++..+ ..|.+.+|..+.. .-..+.+|...-.
T Consensus 149 L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~------------------------~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 149 LAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK------------------------VSQPIEGHAASFA 203 (365)
T ss_dssp GTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTT------------------------EEEEECCSEEEEE
T ss_pred cccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeeccc------------------------ccceeeeeeeeeE
Confidence 124566677777 444443332 3477888888762 1233445544433
Q ss_pred ecceecc-----eEEEeeC---CCeEEEecCCCC-CCCCCCCCceeeee-eec--CCCCeeEEEEcccCCcceEEEEcCC
Q 022590 170 CNRWLGD-----FILSKSV---DNEIVLWEPKMK-EQSPGEGTADILQK-YPV--PECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 170 ~~~~~~~-----~l~~~~~---d~~i~iwd~~~~-~~~~~~~~~~~~~~-~~~--~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.+...|+ +|+.+.. .+.+++-++... ...... ..+...- ++. ...-.-++..++.- ..++.-+.-
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f-~kk~vdi~fppea~~DFPVamqvs~ky--gviyviTK~ 280 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-PKKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKY 280 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCC-CCEEEEECCCTTCTTCCEEEEEEETTT--TEEEEEETT
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCc-ccccceeeCCccccCCceEEEEecccC--CEEEEEeCC
Confidence 3333221 2232222 268999988543 111100 1111111 111 12233445555544 688888899
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEe
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 290 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 290 (294)
|.|++||++++......++.. .+|-..+-+....=++.....|.|.--.
T Consensus 281 G~ihlyDleTgt~i~~nrIS~----d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~ 329 (365)
T 2xzh_A 281 GYIHLYDLETGTCIYMNRISG----ETIFVTAPHEATAGIIGVNRKGQVLSVC 329 (365)
T ss_dssp SEEEEEETTTCCEEEEEECCS----SCEEEEEEEGGGTEEEEEETTCEEEEEE
T ss_pred cEEEEEEcccCcEEEEeccCC----CceEEecccCCCCcEEEEcCCCEEEEEE
Confidence 999999999998776666542 3454444443333444445666654433
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.70 E-value=0.016 Score=48.45 Aligned_cols=198 Identities=7% Similarity=-0.112 Sum_probs=116.4
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
....++|. +.+..+..+-..++.|+.++++.......+.........|++.+.+++++++-...+.|.+.++......
T Consensus 38 ~~~~l~~d--~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 38 EASALDFD--VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp CEEEEEEE--TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred ceEEEEEE--CCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 45577776 6555356666678899999886544333333223456788888745666666667788999998654433
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEee-ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
..+. ..-.....|++.|..+.++.+- +..+.|...++.... ...+...-...
T Consensus 116 ~l~~---~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~------------------------~~~l~~~~~~P 168 (628)
T 4a0p_A 116 VLVW---KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE------------------------RTTLVPNVGRA 168 (628)
T ss_dssp EEEC---SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------------------------CEEEECSCSSE
T ss_pred EEEe---CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc------------------------eEEEECCCCCc
Confidence 2232 2334578999999556655553 224667777665411 11111123345
Q ss_pred eeccee--cceE-EEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEec
Q 022590 169 DCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 245 (294)
Q Consensus 169 ~~~~~~--~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 245 (294)
..++++ ++.| ++-...+.|..+|+..... ..+ .........+++..+ .++.+-...+.|...|.
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-------~v~---~~~l~~P~glav~~~---~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-------EVI---ADDLPHPFGLTQYQD---YIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------EEE---EECCSCEEEEEEETT---EEEEEETTTTEEEEEET
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCce-------EEe---eccCCCceEEEEECC---EEEEecCCCCEEEEEEC
Confidence 566665 3444 4445567899999865431 122 122234556776542 35555556788888887
Q ss_pred cCCC
Q 022590 246 QSSP 249 (294)
Q Consensus 246 ~~~~ 249 (294)
.+++
T Consensus 236 ~tg~ 239 (628)
T 4a0p_A 236 TSGQ 239 (628)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6554
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.68 E-value=0.0091 Score=44.89 Aligned_cols=190 Identities=12% Similarity=0.119 Sum_probs=92.8
Q ss_pred CCceEEEEeecC-----CeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCCC-----cEEEEEcCCCce
Q 022590 21 DGIPFLVAGGIN-----GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKDE-----SVRLWNVQTGIC 88 (294)
Q Consensus 21 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~ 88 (294)
++. +++.|+.+ ..+.+||..+.+-. ..+......-..+.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 61 ~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGL-VFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTE-EEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCE-EEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 455 77777754 35788888765422 122211112222222 457777777653 477888876654
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecC-------CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
... ... .....-.+++.. ++.+++.|+.+ ..+.+||+.+..-.. .+ ..
T Consensus 137 ~~~-~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~--------~~-------------~~ 191 (302)
T 2xn4_A 137 FHV-APM-NTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTY--------IA-------------EM 191 (302)
T ss_dssp EEE-CCC-SSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEE--------EC-------------CC
T ss_pred eec-CCC-CCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE--------CC-------------CC
Confidence 332 211 111111223332 56777777653 347788877632110 00 00
Q ss_pred ecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC
Q 022590 162 SVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 162 ~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
........++.+++.+++.|+.+ ..+.+||+.+.+ ...+...+....... + ...++ .+++.|+.
T Consensus 192 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~r~~~~-~-~~~~~--~i~v~GG~ 260 (302)
T 2xn4_A 192 STRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA-------WRQVADMNMCRRNAG-V-CAVNG--LLYVVGGD 260 (302)
T ss_dssp SSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCE-E-EEETT--EEEEECCB
T ss_pred ccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC-------EeeCCCCCCccccCe-E-EEECC--EEEEECCc
Confidence 00111112223346677777654 368899987653 112222221111111 2 22234 46666665
Q ss_pred C-----CeEEEEeccCCCc
Q 022590 237 E-----GKIFVWELQSSPP 250 (294)
Q Consensus 237 d-----g~i~i~d~~~~~~ 250 (294)
+ ..+.+||+.+.+.
T Consensus 261 ~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CSSSBCCCEEEEETTTTEE
T ss_pred CCCcccccEEEEcCCCCeE
Confidence 4 3488999988753
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.58 E-value=0.013 Score=44.26 Aligned_cols=193 Identities=9% Similarity=0.063 Sum_probs=93.5
Q ss_pred CCceEEEEeec----C-----CeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCC-----CcEEEEEcC
Q 022590 21 DGIPFLVAGGI----N-----GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKD-----ESVRLWNVQ 84 (294)
Q Consensus 21 ~~~~~l~~~~~----d-----g~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~ 84 (294)
++. +++.|+. + ..+.+||..+.+-. ..+......-..+.+ ++.+++.|+.+ ..+.+||+.
T Consensus 70 ~~~-lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGL-LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTE-EEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCE-EEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCC
Confidence 455 6777765 2 45788888765422 122211112222222 45677777644 357888987
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC-----CcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
+.+-... ... .....-.+++.. ++.+++.|+.+ ..+.+||+.+..- ...+.
T Consensus 146 ~~~W~~~-~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--------~~~~~------------ 201 (308)
T 1zgk_A 146 RDEWHLV-APM-LTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW--------RMITA------------ 201 (308)
T ss_dssp TTEEEEC-CCC-SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE--------EECCC------------
T ss_pred CCeEeEC-CCC-CccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE--------eeCCC------------
Confidence 7653322 111 011111222232 56777777765 4577888766321 11100
Q ss_pred EeecCCCceeecceecceEEEeeCC-----CeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEE
Q 022590 160 IASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 234 (294)
Q Consensus 160 ~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 234 (294)
.......-.++.+++.+++.|+.+ ..+.+||+.+.+ ...+...+....... +.. .++ .+++.|
T Consensus 202 -~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~-~~~-~~~--~i~v~G 269 (308)
T 1zgk_A 202 -MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET-------WTFVAPMKHRRSALG-ITV-HQG--RIYVLG 269 (308)
T ss_dssp -CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-------EEECCCCSSCCBSCE-EEE-ETT--EEEEEC
T ss_pred -CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc-------EEECCCCCCCccceE-EEE-ECC--EEEEEc
Confidence 000111112223346677777654 468899987653 112222222111112 222 233 466666
Q ss_pred cCC-----CeEEEEeccCCCceee
Q 022590 235 NRE-----GKIFVWELQSSPPVLI 253 (294)
Q Consensus 235 ~~d-----g~i~i~d~~~~~~~~~ 253 (294)
+.+ ..+.+||+.+.+....
T Consensus 270 G~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTEEEEE
T ss_pred CcCCCcccceEEEEcCCCCEEeec
Confidence 643 4578888887754433
No 311
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.58 E-value=0.014 Score=44.28 Aligned_cols=225 Identities=12% Similarity=0.102 Sum_probs=105.5
Q ss_pred EEEEeecCCeEEEEEcCCccccc-eecc-cCcceEEEEeCCCCCceEEEeeC----CC-------cEEEEEcCCCceEEE
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHK-SFVG-HGDSINEIRTQPLKPSLVVSASK----DE-------SVRLWNVQTGICILI 91 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~-~~~~-h~~~v~~~~~~~~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~~ 91 (294)
+++.|+. .+..||..+++-.. .+.. ....-.+++ .. ++.+++.|+. ++ .+..||..+.+-..
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~- 92 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG- 92 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CS-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EE-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-
Confidence 5556653 48899988776432 1111 111112333 33 5677777773 12 16678887665432
Q ss_pred eeccCCCCCceeEEEEecCCCceEEeeecC-------CcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 92 FAGAGGHRNEVLSVDFHPSDIYRIASCGMD-------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 92 ~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
+........ -.+++.. ++.+++.|+.+ ..+.+||+.+..-. ..+.. +. ....|
T Consensus 93 ~~~~p~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~--------~~~~~--------p~-~r~~~ 152 (318)
T 2woz_A 93 LPPLPSARC-LFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS--------EVKNL--------PI-KVYGH 152 (318)
T ss_dssp CSCBSSCBC-SCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE--------EECCC--------SS-CEESC
T ss_pred CCCCCcccc-ccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe--------ECCCC--------CC-ccccc
Confidence 221101111 1222322 56777777764 24677777653211 00000 00 01112
Q ss_pred CCceeecceecceEEEeeC------CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC-
Q 022590 165 SNYVDCNRWLGDFILSKSV------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE- 237 (294)
Q Consensus 165 ~~~i~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d- 237 (294)
. ++...+.+++.|+. -..+.+||+.+.+ ...+...+....... ++. .++ .+++.|+.+
T Consensus 153 ~----~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~-~~~-~~~--~iyv~GG~~~ 217 (318)
T 2woz_A 153 N----VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD-------WKDLAPMKTPRSMFG-VAI-HKG--KIVIAGGVTE 217 (318)
T ss_dssp E----EEEETTEEEEECCEESSSCBCCCEEEEETTTTE-------EEEECCCSSCCBSCE-EEE-ETT--EEEEEEEEET
T ss_pred E----EEEECCEEEEEcCCCCCCCccceEEEEcCCCCE-------EEECCCCCCCcccce-EEE-ECC--EEEEEcCcCC
Confidence 1 22234666666654 2358899987653 122222222111112 222 233 455556532
Q ss_pred ----CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccC--------------CcEEEEecCC
Q 022590 238 ----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED--------------GAIWRWDAIP 293 (294)
Q Consensus 238 ----g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~i~vw~~~~ 293 (294)
..+.+||+.+.+......++. ....-..+ ..++++++.|+.+ ..+.+||+++
T Consensus 218 ~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 218 DGLSASVEAFDLKTNKWEVMTEFPQ--ERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp TEEEEEEEEEETTTCCEEECCCCSS--CCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred CCccceEEEEECCCCeEEECCCCCC--cccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 357789998876444433321 11111222 2356777777754 3477888764
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.50 E-value=0.022 Score=44.73 Aligned_cols=218 Identities=16% Similarity=0.169 Sum_probs=124.4
Q ss_pred CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCC
Q 022590 33 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 112 (294)
Q Consensus 33 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 112 (294)
..|.|.|+.++..+.+-.- .--+.-.+| ..+.+|.-. ..++.|+|+++.+.+..+. ....|.--.|-. .
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~----~~e~VvfWkWis--~ 116 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT----MTDDVTFWKWIS--L 116 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---CCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEE----CSSCCCEEEEEE--T
T ss_pred CeEEEEECCCCCcceeccc---ccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhccee----cCCCceEEEecC--C
Confidence 4788888877654422211 112334577 556666554 6899999999999998887 566788888874 4
Q ss_pred ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC----ceeeccee--cceEEEee----
Q 022590 113 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN----YVDCNRWL--GDFILSKS---- 182 (294)
Q Consensus 113 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~--~~~l~~~~---- 182 (294)
+.|+-.+ +..|+-|++... ..|...+..|.. .|.....+ .++++..+
T Consensus 117 ~~l~lVT-~taVyHWsi~~~----------------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 117 NTVALVT-DNAVYHWSMEGE----------------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp TEEEEEC-SSEEEEEESSSS----------------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred CeEEEEc-CCeeEEecccCC----------------------CCchhheecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 4455555 468999999751 123333333322 12222222 44444332
Q ss_pred ---CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC---CCeEEEEeccCC---Ccee-
Q 022590 183 ---VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR---EGKIFVWELQSS---PPVL- 252 (294)
Q Consensus 183 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~---~~~~- 252 (294)
-.|.+.+|..+.......+++......+......-.+ .+++.+.. .+.+++.++... .+..
T Consensus 174 ~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~---------~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~ 244 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEES---------TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP 244 (494)
T ss_dssp TTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEE---------EEEEEEECSTTCCEEEEEECSCCCTTCCCCC
T ss_pred CCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCc---------eEEEEEEecCCCcEEEEEEcCCCccCCCCcc
Confidence 2477899998876433333333333333222211111 12222222 378999998543 1111
Q ss_pred e--e--eccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 253 I--A--RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 253 ~--~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
. . .++......--.++..++.-..+..-+.-|.|++||+++
T Consensus 245 kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 245 KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (494)
T ss_dssp CEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTT
T ss_pred ceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccc
Confidence 1 1 111112234456788999888899999999999999986
No 313
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.45 E-value=0.023 Score=43.84 Aligned_cols=94 Identities=13% Similarity=0.079 Sum_probs=46.2
Q ss_pred CCceEEEEeec-CCeEEEEEcCC--cc--ccceec-ccCcceEEEEeCCCCCceEEEeeC-C---------CcEEEEEcC
Q 022590 21 DGIPFLVAGGI-NGIIRVIDVSN--EK--LHKSFV-GHGDSINEIRTQPLKPSLVVSASK-D---------ESVRLWNVQ 84 (294)
Q Consensus 21 ~~~~~l~~~~~-dg~i~iw~~~~--~~--~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~-d---------g~i~vwd~~ 84 (294)
+++ +++.|+. ...+.+||..+ .+ .+..+. .....-..+.+ ++.+++.|+. + ..+.+||+.
T Consensus 19 ~~~-iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDT-VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTE-EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCE-EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 555 6666654 45788888863 22 222222 11111122222 4567777776 2 468889987
Q ss_pred CCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC
Q 022590 85 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 121 (294)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d 121 (294)
+.+-... .........-.++.. . ++.+++.|+.+
T Consensus 95 ~~~W~~~-~~~~p~~r~~~~~~~-~-~~~iyv~GG~~ 128 (357)
T 2uvk_A 95 TNSWVKL-MSHAPMGMAGHVTFV-H-NGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEC-SCCCSSCCSSEEEEE-E-TTEEEEEECCC
T ss_pred CCcEEEC-CCCCCcccccceEEE-E-CCEEEEEeCcC
Confidence 7653322 211101111112222 3 67788888754
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.45 E-value=0.022 Score=43.48 Aligned_cols=231 Identities=9% Similarity=-0.037 Sum_probs=111.8
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccccee----cccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF----VGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 83 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 83 (294)
...+.++.+. +++. .++ .+.+|.| +...+.++.-... ......+.+|.+.+ +..++ ++.++.|.. ..
T Consensus 35 ~~~~~~v~~~--~~~~-~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~-~g~~g~i~~-S~ 105 (327)
T 2xbg_A 35 TATILDMSFI--DRHH-GWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWI-VGEPPIMLH-TT 105 (327)
T ss_dssp SSCEEEEEES--SSSC-EEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEE-EEETTEEEE-ES
T ss_pred CCcEEEEEEC--CCCc-EEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEE-EECCCeEEE-EC
Confidence 3567888775 5555 555 4557765 3333434321221 12245789999976 34444 455665433 33
Q ss_pred CCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEE-EeccccccccccceeecCCCCCCCCceeeeceEEee
Q 022590 84 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI-WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 162 (294)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
+.|+.-........+...+..+.+.+ ++..++++ .+|.|.. .|--.. . .. ...
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~S~DgG~t---W-------------------~~--~~~ 159 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYRTKDSGKN---W-------------------QA--LVQ 159 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEEESSTTSS---E-------------------EE--EEC
T ss_pred CCCCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEEEcCCCCC---C-------------------EE--eec
Confidence 34554444332112335578888876 66655554 4554422 221110 0 00 011
Q ss_pred cCCCceeeccee--cceEEEeeCCCeE-EEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCe
Q 022590 163 VHSNYVDCNRWL--GDFILSKSVDNEI-VLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGK 239 (294)
Q Consensus 163 ~~~~~i~~~~~~--~~~l~~~~~d~~i-~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~ 239 (294)
.....+..+.+. +.+++.+ .+|.+ +-.|-. +. ....+. ......+..+.+.+++ .++ ..+.+|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~g-G~------tW~~~~--~~~~~~~~~~~~~~~g--~~~-~~~~~G~ 226 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPG-QT------AWEPHN--RTTSRRLHNMGFTPDG--RLW-MIVNGGK 226 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEE-TTSSEEEEECTT-CS------SCEEEE--CCSSSCEEEEEECTTS--CEE-EEETTTE
T ss_pred CCCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCC-CC------ceeECC--CCCCCccceeEECCCC--CEE-EEeCCce
Confidence 223345555554 4455544 44444 334421 11 122221 1234567788888876 344 4556787
Q ss_pred EEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEE
Q 022590 240 IFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 287 (294)
Q Consensus 240 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 287 (294)
+++.+...++.-.............+.++++.+++.+++++. +|.|.
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~ 273 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL 273 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE
Confidence 777642212110001111001223588999998887777664 66553
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.43 E-value=0.025 Score=43.70 Aligned_cols=102 Identities=19% Similarity=0.114 Sum_probs=58.1
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc-cccee---cccCcceEEEEeCCC---CCceEEEeeC---C----
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK-LHKSF---VGHGDSINEIRTQPL---KPSLVVSASK---D---- 75 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~---~~h~~~v~~~~~~~~---~~~~l~s~~~---d---- 75 (294)
.-..++|. |+|+ |+++..+|.|++++ .+++ .+..+ .........|+++|+ ++.++++-+. +
T Consensus 30 ~P~~ia~~--pdG~--l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPL--GGGR--YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEE--ETTE--EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEc--CCCe--EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 34677776 8897 55556669999997 3444 22211 112356789999993 3555454432 3
Q ss_pred CcEEEEEcCCC--c-----eE-EEeeccCCCCCceeEEEEecCCCceEEeee
Q 022590 76 ESVRLWNVQTG--I-----CI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 76 g~i~vwd~~~~--~-----~~-~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
..|..++.... . .+ ..+.....| ....|.|.| ++.++++.+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECT-TSCEEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECC-CCcEEEEEC
Confidence 56777776543 1 11 112211123 346799999 777666644
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.38 E-value=0.033 Score=43.78 Aligned_cols=233 Identities=10% Similarity=0.118 Sum_probs=133.2
Q ss_pred cCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCC-CceEEEeeccCC
Q 022590 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT-GICILIFAGAGG 97 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~ 97 (294)
+|..+ .+|.=. ..++.|+|+++.+.++.+.-. ..|.-=.|-. .+.|+-.+. ..|.-|++.. ..+.+.|.....
T Consensus 74 nP~~~-iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis--~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 74 NPASK-VIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp CSSSS-CEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEE--TTEEEEECS-SEEEEEESSSSCCCEEEEECCGG
T ss_pred CCCCc-EEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecC--CCeEEEEcC-CeeEEecccCCCCchhheecchh
Confidence 56666 566554 679999999999888887754 4566666654 344554443 5799999974 345566653100
Q ss_pred -CCCceeEEEEecCCCceEEeee-------cCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 98 -HRNEVLSVDFHPSDIYRIASCG-------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 98 -~~~~v~~l~~~~~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
....|..-..++ +...++..+ ..|.+.+|..+.. .-..+.+|.....
T Consensus 148 L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~------------------------~sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 148 LAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK------------------------VSQPIEGHAASFA 202 (494)
T ss_dssp GTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTC------------------------CEEEECCSEEEEE
T ss_pred cccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecccc------------------------ccchheeeeeeeE
Confidence 124577777777 555444332 3477888888762 2334455554443
Q ss_pred ecceec-----ceEEEeeC---CCeEEEecCCCCC-CCCCCCCceeeee-ee--cCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 170 CNRWLG-----DFILSKSV---DNEIVLWEPKMKE-QSPGEGTADILQK-YP--VPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 170 ~~~~~~-----~~l~~~~~---d~~i~iwd~~~~~-~~~~~~~~~~~~~-~~--~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.+...| ..+..+.. .+.+++-++.... ..... ......- ++ ....-..++..++.- ..++.-+.-
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f-~kk~vdv~fppe~~~DFPvamqvs~ky--gviyviTK~ 279 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-PKKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKY 279 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC-CCEEEECCCCTTSTTCCEEEEEEETTT--TEEEEEETT
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc-cceeeeeeCCcccccCceeEEEecccC--CEEEEEecC
Confidence 333332 23333332 3789999986431 11100 0111111 11 112334455566554 688888899
Q ss_pred CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEE
Q 022590 238 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 289 (294)
Q Consensus 238 g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 289 (294)
|.|++||++++..+...++. ..+|-..+-.....=++.....|.|.--
T Consensus 280 G~i~lyDleTgt~i~~nrIs----~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 280 GYIHLYDLETGTCIYMNRIS----GETIFVTAPHEATAGIIGVNRKGQVLSV 327 (494)
T ss_dssp SEEEEEETTTCCEEEEEECC----SSCEEEEEEETTTTEEEEEETTCEEEEE
T ss_pred ceEEEEecccceeeeeeccc----CCceEEecccCCCCcEEEEccCceEEEE
Confidence 99999999999877666654 2345444444444445555566665443
No 317
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.30 E-value=0.047 Score=44.03 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=70.2
Q ss_pred eeEEEEE-------eecCCCceEEEEeecCC-------eEEEEEcCC-cccc-----ceecccCcceEEEEeCCCCCceE
Q 022590 10 SFYTVSW-------ACNVDGIPFLVAGGING-------IIRVIDVSN-EKLH-----KSFVGHGDSINEIRTQPLKPSLV 69 (294)
Q Consensus 10 ~v~~~~~-------~~~~~~~~~l~~~~~dg-------~i~iw~~~~-~~~~-----~~~~~h~~~v~~~~~~~~~~~~l 69 (294)
....++| . ++|+ .|+++...+ .|.+.+... ++.. ..+... .....++++|.++.++
T Consensus 187 ~p~~ia~~~~~~~~d--~~G~-~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LY 262 (496)
T 3kya_A 187 RIRSIAFNKKIEGYA--DEAE-YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELY 262 (496)
T ss_dssp BEEEEEECCCBTTTB--CTTC-EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEE
T ss_pred CCcEEEEeecccccC--CCCC-EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEE
Confidence 4667777 6 8887 555554443 266665433 2222 122222 2446788899666667
Q ss_pred EEeeCCCcEEEEEcC-------CCce-----------EEE-eeccCCCCCceeEEEEecCCCc-eEEeeecCCcEEEEec
Q 022590 70 VSASKDESVRLWNVQ-------TGIC-----------ILI-FAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSM 129 (294)
Q Consensus 70 ~s~~~dg~i~vwd~~-------~~~~-----------~~~-~~~~~~~~~~v~~l~~~~~~~~-~l~~~~~dg~i~~wd~ 129 (294)
++-..++.|..+|+. ++.. ... +.. +.......|+|+| +++ ++++-.....|+.++.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEec--CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEec
Confidence 777788889999987 4543 112 221 2334568999999 776 4555566778888766
Q ss_pred cc
Q 022590 130 KE 131 (294)
Q Consensus 130 ~~ 131 (294)
..
T Consensus 340 dg 341 (496)
T 3kya_A 340 DE 341 (496)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.25 E-value=0.037 Score=41.86 Aligned_cols=104 Identities=13% Similarity=0.015 Sum_probs=52.9
Q ss_pred CCCceEEEEeec----C-------CeEEEEEcCCcccc--ceecccCcceEEEEeCCCCCceEEEeeCC--------CcE
Q 022590 20 VDGIPFLVAGGI----N-------GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKD--------ESV 78 (294)
Q Consensus 20 ~~~~~~l~~~~~----d-------g~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------g~i 78 (294)
.++. +++.|+. + ..+..||..+++-. ..+......-..+.+ ++.+++.|+.+ ..+
T Consensus 44 ~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 44 KENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp TTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCE
T ss_pred ECCE-EEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceE
Confidence 4566 7777763 1 12778888765422 112111111122222 45677777742 458
Q ss_pred EEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeec-C-----CcEEEEeccc
Q 022590 79 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-D-----NTVKIWSMKE 131 (294)
Q Consensus 79 ~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~-d-----g~i~~wd~~~ 131 (294)
.+||..+.+-.. +.... ....-.+++.. ++.+++.|+. + ..+.+||+.+
T Consensus 120 ~~~d~~~~~W~~-~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 120 MCYDRLSFKWGE-SDPLP-YVVYGHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp EEEETTTTEEEE-CCCCS-SCCBSCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred EEECCCCCcEeE-CCCCC-CcccceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 889987765322 22110 11111222232 6677778776 2 3578888776
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.13 E-value=0.062 Score=42.14 Aligned_cols=167 Identities=14% Similarity=0.052 Sum_probs=93.4
Q ss_pred CCceEEEeeCCCcEEEEEcCCCceEEEeeccC-CCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeec
Q 022590 65 KPSLVVSASKDESVRLWNVQTGICILIFAGAG-GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 143 (294)
Q Consensus 65 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 143 (294)
++..++.+- ++.||.-++..+...+.+.... -.-..|..+..+| ++.+||..+ +..|.|-.+........... .
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~-~- 105 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVS-I- 105 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHH-H-
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccc-c-
Confidence 444444443 3778888877544444444210 0122688899999 888888876 46899998884211110000 0
Q ss_pred CCCCCCCCceeeeceEEe----ecCCCceeeccee-----cceEEEeeCCCeEEEecCCCCCCCCC-CCCceeeeeeecC
Q 022590 144 DLPSKFPTKYVQFPVFIA----SVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPG-EGTADILQKYPVP 213 (294)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~-----~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~ 213 (294)
....+.....+ .....+|..+.|+ +..|++-..|+.|++||+......+. .............
T Consensus 106 -------~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~ 178 (452)
T 3pbp_A 106 -------QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDAR 178 (452)
T ss_dssp -------HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSS
T ss_pred -------ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcc
Confidence 00000000111 1135678888886 66899999999999999987432211 0000001122223
Q ss_pred CCCeeEEEEcccCCcceEEEEcCCCeEEEE
Q 022590 214 ECDIWFIKFSCDFHYNAAAIGNREGKIFVW 243 (294)
Q Consensus 214 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~ 243 (294)
...+.+++|..++--.|+++.+..|.|+-.
T Consensus 179 ~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 179 VNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 367889999997632333335588888754
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.11 E-value=0.059 Score=41.56 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=57.0
Q ss_pred eEEEEEeecCCCceEEEEeecCCeEEEEEcCCccc--ccee---cccCcceEEEEeCCC---CCceEEEeeCC-----Cc
Q 022590 11 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL--HKSF---VGHGDSINEIRTQPL---KPSLVVSASKD-----ES 77 (294)
Q Consensus 11 v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~---~~h~~~v~~~~~~~~---~~~~l~s~~~d-----g~ 77 (294)
-..++|. |+|+ ++ ++..+|.|++++ +++. +..+ .........|+++|+ ++.++++-... +.
T Consensus 33 P~~ia~~--pdG~-l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 33 PWALAFL--PDGG-ML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp EEEEEEC--TTSC-EE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred ceEEEEc--CCCe-EE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3567776 9998 44 445679999998 3332 1111 112356789999993 24444444432 56
Q ss_pred EEEEEcCCCce-----EE-EeeccCCCCCceeEEEEecCCCceEEeee
Q 022590 78 VRLWNVQTGIC-----IL-IFAGAGGHRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 78 i~vwd~~~~~~-----~~-~~~~~~~~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
|..++...+.. +. .+....+.......|+|.| ++.++++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEEC
Confidence 77788764321 11 1220001112346899999 777666543
No 321
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.03 E-value=0.074 Score=48.37 Aligned_cols=219 Identities=15% Similarity=0.169 Sum_probs=119.9
Q ss_pred CeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCC
Q 022590 33 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 112 (294)
Q Consensus 33 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 112 (294)
.+|.|.|+.++..+.+-. -.--+.-.+| ..+.+|.-. ..++.|+|+++.+.+..+. ...+|.--.|- +.
T Consensus 48 ~~vvIidl~~~~~~~rrp---i~AdsAIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~----~~e~VvfWkWi--s~ 116 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHT----MTDDVTFWKWI--SL 116 (1630)
T ss_pred ceEEEEECCCCCCccccc---ccchhhccCC-CcceEEEec-CCeEEEeehHHhhhhcccc----cCCCceEEEec--CC
Confidence 478888887765432111 1112233567 555555543 6889999999988888776 55678878886 44
Q ss_pred ceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC----CCceeeccee--cceEEEee----
Q 022590 113 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH----SNYVDCNRWL--GDFILSKS---- 182 (294)
Q Consensus 113 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~--~~~l~~~~---- 182 (294)
+.|+-.+ +..|.-|++.... .|...+..| ...|.....+ .++++..|
T Consensus 117 ~~l~lVT-~~aVyHW~~~~~s----------------------~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 117 NTVALVT-DNAVYHWSMEGES----------------------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred CeeEEEc-CCeEEEeccCCCC----------------------ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 5555555 4589999996511 111111111 1112221111 34444322
Q ss_pred ---CCCeEEEecCCCCCCCCCCCCceeeeeeecCCC--CeeEEEEcccCCcceEEEEcCCCeEEEEeccCC---Cceeee
Q 022590 183 ---VDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC--DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS---PPVLIA 254 (294)
Q Consensus 183 ---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~ 254 (294)
-.|.+.+|...........++......+..+.. +..-++|.... ...+.++|.++... .+....
T Consensus 174 ~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~--------~~g~kLhi~Ei~~~~~~~~~f~k 245 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG--------QAGGKLHIIEVGTPPTGNQPFPK 245 (1630)
T ss_pred CCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEec--------CCCceEEEEecCCCccCCCCCcc
Confidence 358899999887654443333333333332221 11122222221 11368889888543 111111
Q ss_pred -----eccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecCC
Q 022590 255 -----RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 293 (294)
Q Consensus 255 -----~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 293 (294)
.++......-..++..++.-..+..-+.-|.|+++|+.+
T Consensus 246 k~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 246 KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred ccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 111111223345688888878888889999999999976
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.00 E-value=0.1 Score=47.46 Aligned_cols=203 Identities=9% Similarity=0.108 Sum_probs=110.2
Q ss_pred cCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC-ceEEEeeccCC
Q 022590 19 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG-ICILIFAGAGG 97 (294)
Q Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~ 97 (294)
+|..+ .+|.=. ..++.|+|+++...++.+.-. .+|.-=.|-. .+.|+-.+. ..|..|++... .+.+.|. .
T Consensus 74 nP~~~-iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis--~~~l~lVT~-~aVyHW~~~~~s~P~k~fd---R 144 (1630)
T 1xi4_A 74 NPASK-VIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS--LNTVALVTD-NAVYHWSMEGESQPVKMFD---R 144 (1630)
T ss_pred CCCcc-eEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecC--CCeeEEEcC-CeEEEeccCCCCccHHHHh---c
Confidence 56665 555554 679999999998888877743 4566666764 344444443 56999999642 3333343 2
Q ss_pred C----CCceeEEEEecCCCceEE-ee------ecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC
Q 022590 98 H----RNEVLSVDFHPSDIYRIA-SC------GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN 166 (294)
Q Consensus 98 ~----~~~v~~l~~~~~~~~~l~-~~------~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
| ...|..-..++ +...++ +| ...|.+.+|....... ..+.+|..
T Consensus 145 ~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s------------------------Q~iegha~ 199 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------------------QPIEGHAA 199 (1630)
T ss_pred chhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccccc------------------------hhhhHhHh
Confidence 3 34566666777 444444 33 2457888888876321 12222322
Q ss_pred ceeeccee-----cceEEEee---CCCeEEEecCCCC-C--CCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc
Q 022590 167 YVDCNRWL-----GDFILSKS---VDNEIVLWEPKMK-E--QSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 235 (294)
Q Consensus 167 ~i~~~~~~-----~~~l~~~~---~d~~i~iwd~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 235 (294)
....+... ...+..+. ..+.+++-++... . .............-.....-..++..++.- .++..-+
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~--g~iy~it 277 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLIT 277 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc--CEEEEEe
Confidence 22222211 11222111 1368899888543 1 111111111111001112223345555544 5788888
Q ss_pred CCCeEEEEeccCCCceeeeecc
Q 022590 236 REGKIFVWELQSSPPVLIARLS 257 (294)
Q Consensus 236 ~dg~i~i~d~~~~~~~~~~~~~ 257 (294)
.-|.+.+||+.++..+...++.
T Consensus 278 k~G~~~~~d~~t~~~i~~~ris 299 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTCIYMNRIS 299 (1630)
T ss_pred cCceEEEEecccchhhhhcccc
Confidence 8999999999999766555543
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.92 E-value=0.091 Score=40.48 Aligned_cols=60 Identities=5% Similarity=-0.074 Sum_probs=27.8
Q ss_pred eEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC------eEEEEeccCCCceeeeec
Q 022590 186 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG------KIFVWELQSSPPVLIARL 256 (294)
Q Consensus 186 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~ 256 (294)
.+.+||+.+.+ ...+..++.....- .+...++ .+++.|+.++ .|.++++++++.......
T Consensus 286 ~~~~yd~~~~~-------W~~~~~~p~~r~~~--~~~~~~~--~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGK-------WDKSGELSQGRAYG--VSLPWNN--SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC----------CEEEEECSSCCBSS--EEEEETT--EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCc-------eeeCCCCCCCcccc--eeEEeCC--EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 46788887653 23333333332222 2233344 4666666432 466678888765444433
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.85 E-value=0.25 Score=44.59 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=66.7
Q ss_pred EEEEeecCCeEEEEEcCCcccccee-cccCcceEEEEeCCCC-----CceEEEeeC-CCcEEEEEcCCCceEEEeeccCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSF-VGHGDSINEIRTQPLK-----PSLVVSASK-DESVRLWNVQTGICILIFAGAGG 97 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~~-----~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~ 97 (294)
+++.++ ++.+.++++++++..... ..-...|.|+++.|.. ..+++.|.. |++++|+++.+.+.+..... +
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L--~ 601 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML--G 601 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEEC--C
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEEC--C
Confidence 455554 577888887765322111 1235689999998632 368899986 99999999987766654432 1
Q ss_pred CCCceeEEEEecC-CCceEEeeecCCcEEEEeccc
Q 022590 98 HRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKE 131 (294)
Q Consensus 98 ~~~~v~~l~~~~~-~~~~l~~~~~dg~i~~wd~~~ 131 (294)
-.....++.+... +..+|..|-.||.+.-+.+..
T Consensus 602 ~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 602 GEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred CCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 1234455544321 446788999999987776553
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.72 E-value=0.13 Score=39.54 Aligned_cols=193 Identities=12% Similarity=0.068 Sum_probs=99.7
Q ss_pred ceEEEEeCCCCCceEEEee------------CCCcEEEEEcCCC-ceEEEeeccC----CCCCceeEEEEecC-CC--ce
Q 022590 55 SINEIRTQPLKPSLVVSAS------------KDESVRLWNVQTG-ICILIFAGAG----GHRNEVLSVDFHPS-DI--YR 114 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~-~~~~~~~~~~----~~~~~v~~l~~~~~-~~--~~ 114 (294)
..-++...| ++..+++++ .+|.|.++|..+. .....+.... ........|.+.++ ++ .+
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 456677777 665555542 6899999998742 1222332211 12346778887662 22 23
Q ss_pred EEeeec--CCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC-CCceeeccee--cceEEEee-------
Q 022590 115 IASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH-SNYVDCNRWL--GDFILSKS------- 182 (294)
Q Consensus 115 l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~--~~~l~~~~------- 182 (294)
+++-.. +.++.+|++........ .+....+. -...+.+..+ |.+.++..
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~-------------------~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLL-------------------HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEE-------------------EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred EEEECCCCCCeEEEEEEECCCCEEE-------------------EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence 444333 56788888765321111 11111111 1223344443 33333322
Q ss_pred ----------CCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCC-Cce
Q 022590 183 ----------VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS-PPV 251 (294)
Q Consensus 183 ----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~ 251 (294)
..|.+..+|.. + +......-...+.++|+|+++ .+.++-+..+.|..|++... +..
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~--~----------~~~~~~~l~~pNGia~spDg~-~lYvadt~~~~I~~~~~~~~g~l~ 257 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPN--D----------VRVVAEGFDFANGINISPDGK-YVYIAELLAHKIHVYEKHANWTLT 257 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTT--C----------CEEEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cccchhhccCCccEEEEEECC--e----------EEEeecCCcccCcceECCCCC-EEEEEeCCCCeEEEEEECCCCcEe
Confidence 12455555542 1 111111123467899999996 34455567889999999743 221
Q ss_pred eeeeccccccCCCeEEEEEcc-CCCEEEEeccC
Q 022590 252 LIARLSHAQSKSPIRQTAMSY-DGSTILSCCED 283 (294)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d 283 (294)
....+. .....-.+++.+ +|++.+++..+
T Consensus 258 ~~~~~~---~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 258 PLRVLS---FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEE---CSSEEEEEEECTTTCCEEEEEESC
T ss_pred cCEEEe---CCCCCceEEEeCCCCcEEEEecCC
Confidence 112221 134567889998 58887766433
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.69 E-value=0.14 Score=39.38 Aligned_cols=88 Identities=13% Similarity=0.070 Sum_probs=47.2
Q ss_pred cCCeEEEEEcCCcc-cccee--cc-----cCcceEEEEeCCC-CC-ceEEEe-eC--CCcEEEEEcCCC-ceEEEeeccC
Q 022590 31 INGIIRVIDVSNEK-LHKSF--VG-----HGDSINEIRTQPL-KP-SLVVSA-SK--DESVRLWNVQTG-ICILIFAGAG 96 (294)
Q Consensus 31 ~dg~i~iw~~~~~~-~~~~~--~~-----h~~~v~~~~~~~~-~~-~~l~s~-~~--dg~i~vwd~~~~-~~~~~~~~~~ 96 (294)
.+|.|.++|.++.. ....+ .+ ..-....|.+.++ ++ .+|+.+ .. +.+|.+|++..+ .....+....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987421 11222 22 1235666776542 23 234444 22 567888887654 2222222221
Q ss_pred C-CCCceeEEEEecCCCceEEeee
Q 022590 97 G-HRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 97 ~-~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
+ .-...+.+.+.+ ++.++++..
T Consensus 161 g~~~~~pND~~v~~-~G~fyvt~~ 183 (355)
T 3sre_A 161 HKLLPSVNDIVAVG-PEHFYATND 183 (355)
T ss_dssp CTTCSSEEEEEEEE-TTEEEEEES
T ss_pred cCCCCCCceEEEeC-CCCEEecCC
Confidence 2 224578999998 777666543
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.68 E-value=0.13 Score=38.89 Aligned_cols=105 Identities=15% Similarity=0.032 Sum_probs=51.8
Q ss_pred CCCceEEEEeec----CC-------eEEEEEcCCccccc--eecccCcceEEEEeCCCCCceEEEeeCC-------CcEE
Q 022590 20 VDGIPFLVAGGI----NG-------IIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLVVSASKD-------ESVR 79 (294)
Q Consensus 20 ~~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------g~i~ 79 (294)
.++. +++.|+. ++ .+.+||..+.+-.. .+......-..+.+ ++.+++.|+.+ ..+.
T Consensus 55 ~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSC-EEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEE
T ss_pred ECCE-EEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE---CCEEEEEcCccCCCCcccceEE
Confidence 4565 7777773 12 26778876654221 12211111122222 45677777754 2477
Q ss_pred EEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecC------CcEEEEecccc
Q 022590 80 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEF 132 (294)
Q Consensus 80 vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~d------g~i~~wd~~~~ 132 (294)
+||+.+.+-...-... ....-.+++. . ++.+++.|+.+ ..+.+||+.+.
T Consensus 131 ~yd~~~~~W~~~~~~p--~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLP--IKVYGHNVIS-H-NGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEETTTTEEEEECCCS--SCEESCEEEE-E-TTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEeCCCCCEeECCCCC--CcccccEEEE-E-CCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 8888766533221110 1101112222 2 66777777642 35888888763
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.2 Score=38.28 Aligned_cols=111 Identities=13% Similarity=0.073 Sum_probs=69.0
Q ss_pred EEEEeecCCeEEEEEcCCccccceeccc-CcceEEEEeC--CCCCceEEEe-eCCCcEEEEEcCCCceEEEeeccC-CCC
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHKSFVGH-GDSINEIRTQ--PLKPSLVVSA-SKDESVRLWNVQTGICILIFAGAG-GHR 99 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~--~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-~~~ 99 (294)
+++.++.||.|.-.|..+|+...+++.. ..++....-. +.++..++.. +.||.|..++..+|.....+.... -..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 7999999999999999999988877653 1232222111 1122344443 689999999998886554443210 011
Q ss_pred CceeEEEEec--------CCCceEEeeecCCcEEEEecccccccc
Q 022590 100 NEVLSVDFHP--------SDIYRIASCGMDNTVKIWSMKEFWTYV 136 (294)
Q Consensus 100 ~~v~~l~~~~--------~~~~~l~~~~~dg~i~~wd~~~~~~~~ 136 (294)
.++.. .-.| ..+..+++|+.+|.+...|+++++...
T Consensus 92 SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 92 SPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp CSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred ccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 22221 0000 034568899999999999999865443
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.032 Score=42.55 Aligned_cols=118 Identities=9% Similarity=0.043 Sum_probs=64.7
Q ss_pred CceEEEeeCCCcEEEEEcCCCceEEEeeccCCCCCceeEEEEe--cCCCceEEee-ecCCcEEEEeccccccccccceee
Q 022590 66 PSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH--PSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTW 142 (294)
Q Consensus 66 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~ 142 (294)
+.+++.++.||.|.-.|..+|+....+... ...++....-. +.++..++.. ..||.|..++..++...... ..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~--~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL--SI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE--EH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee--cc
Confidence 357889999999999999999999888741 11233221110 1122434443 58999999998764221100 00
Q ss_pred cCCCCCCCCceeeeceEEeecCCCcee-ec-c-eecceEEEeeCCCeEEEecCCCCCC
Q 022590 143 TDLPSKFPTKYVQFPVFIASVHSNYVD-CN-R-WLGDFILSKSVDNEIVLWEPKMKEQ 197 (294)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~-~-~~~~~l~~~~~d~~i~iwd~~~~~~ 197 (294)
..... ..| +.....+|. .. . -.+..+++++.+|.+.-.|+++++.
T Consensus 86 ~~lv~-------~SP---~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 86 RQLVS-------TSP---LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HHHHT-------TCS---EEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred cccee-------ccc---cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 00000 000 000001111 00 0 0267888999999999999998873
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.34 E-value=0.27 Score=38.64 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=74.4
Q ss_pred eeeccee--cceEEEeeCCCeEEEecCCCCCCCCCC----CCceeeeeeec------CCCCeeEEEEcccCC-cceEEEE
Q 022590 168 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE----GTADILQKYPV------PECDIWFIKFSCDFH-YNAAAIG 234 (294)
Q Consensus 168 i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~------~~~~i~~~~~~~~~~-~~~l~~~ 234 (294)
|..+..+ |++|+..+ +..|.|-.+..+...... ...+ .+.+.. +..+|..+.|+|-+. +..|++-
T Consensus 68 i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 68 TFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4444444 77777764 568888888743322211 1111 223332 356799999999764 3578999
Q ss_pred cCCCeEEEEeccCCCceeeeecc-------ccccCCCeEEEEEccCCCEEEE--eccCCcEEE
Q 022590 235 NREGKIFVWELQSSPPVLIARLS-------HAQSKSPIRQTAMSYDGSTILS--CCEDGAIWR 288 (294)
Q Consensus 235 ~~dg~i~i~d~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~l~s--~~~dg~i~v 288 (294)
..|+.|++||+......+. .+. .......|.+++|.+++-.|.. .+..|.|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999987432222 111 1123367899999998876666 458887753
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.20 E-value=0.19 Score=35.57 Aligned_cols=189 Identities=8% Similarity=-0.092 Sum_probs=89.3
Q ss_pred CCceEEEeeCCCcEEEEEcCCCc------eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecccccccccc
Q 022590 65 KPSLVVSASKDESVRLWNVQTGI------CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 138 (294)
Q Consensus 65 ~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 138 (294)
...+|+....| +++.=...++. ....+-. +-=..+..++|+| ++.+.++ .+|.+.-.+..+....
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~--~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~--- 73 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGK--GGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDND--- 73 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEES--SSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTC---
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCc--cccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcc---
Confidence 34566777777 66655554443 1122221 0123678999999 8886666 6777665554331000
Q ss_pred ceeecCCCCCCCCceeeeceEEeec-CCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCC
Q 022590 139 SFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC 215 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 215 (294)
.. ......+.. --..-.++.|+ +.+.++ .||.|.-++..+............+. ..--.
T Consensus 74 -------------~W-~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg--~~gw~ 135 (236)
T 1tl2_A 74 -------------NW-MGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVG--SGGWS 135 (236)
T ss_dssp -------------CH-HHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEE--CSSGG
T ss_pred -------------cc-cccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEec--cCCCC
Confidence 00 000001100 00113455565 444444 66999888764432211110111111 00113
Q ss_pred CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC-cee--eeeccccccCCCeEEEEEccCCCEEEEeccCCcE
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP-PVL--IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 286 (294)
.+..+.+.|++ .|.+.. |+.++-....... ... ....-....-...+-+.|.+++.+.+.. +|.+
T Consensus 136 ~~~~lff~p~G---~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 136 GFKFLFFHPNG---YLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp GEEEEEECTTS---CEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred ceEEEEECCCc---eEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 57889999999 344444 7875433222111 000 0000000111234557799999877766 7743
No 332
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.19 E-value=0.3 Score=37.65 Aligned_cols=75 Identities=11% Similarity=0.007 Sum_probs=45.6
Q ss_pred CCeeEEEEcccC-----CcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEec-cCCcEEE
Q 022590 215 CDIWFIKFSCDF-----HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWR 288 (294)
Q Consensus 215 ~~i~~~~~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~v 288 (294)
..+..+.|.... ++.++++....+.|...++..++......+- ......+..+++.|||.+.++.. .+| +|
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~rp~~v~~~pdG~lyv~td~~~g--~I 347 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRIL-TDRGQRIRDVRTGPDGYLYVLTDESSG--EL 347 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEES-GGGCCCEEEEEECTTSCEEEEECSTTE--EE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcc-cCCCCceeEEEECCCCcEEEEEeCCCC--EE
Confidence 346677776421 2357777777888988888765322222211 12235789999999998766543 455 45
Q ss_pred EecC
Q 022590 289 WDAI 292 (294)
Q Consensus 289 w~~~ 292 (294)
|.+.
T Consensus 348 ~ri~ 351 (353)
T 2g8s_A 348 LKVS 351 (353)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.00 E-value=0.62 Score=39.66 Aligned_cols=197 Identities=9% Similarity=0.014 Sum_probs=95.7
Q ss_pred CCceEEEeeCC----CcEEEEEcCCCceEEEe-ec----cCCCCCceeEEEEecCCCceEEeeecCC------cEEEEec
Q 022590 65 KPSLVVSASKD----ESVRLWNVQTGICILIF-AG----AGGHRNEVLSVDFHPSDIYRIASCGMDN------TVKIWSM 129 (294)
Q Consensus 65 ~~~~l~s~~~d----g~i~vwd~~~~~~~~~~-~~----~~~~~~~v~~l~~~~~~~~~l~~~~~dg------~i~~wd~ 129 (294)
++.+++.|+.+ ..+.+||..+++-...- .. .......-....+.. ++.+++.||.++ .+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEeC
Confidence 56777778753 45788898777543332 10 001111122333322 556777776543 4677777
Q ss_pred cccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecce-ecceEEEeeCCC--eEEEecCCCCCCCCCCCCcee
Q 022590 130 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-LGDFILSKSVDN--EIVLWEPKMKEQSPGEGTADI 206 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~ 206 (294)
.+.. |...+. .......-.++.+ .+.+++.|+.++ .+.+||+.+..- ..
T Consensus 476 ~t~~--------W~~~~~-------------~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W-------~~ 527 (695)
T 2zwa_A 476 KTRE--------WSMIKS-------------LSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF-------KD 527 (695)
T ss_dssp TTTE--------EEECCC-------------CSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE-------EE
T ss_pred CCCc--------EEECCC-------------CCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce-------EE
Confidence 7631 111100 0001111112222 467777777654 689999886531 11
Q ss_pred eee---eecCCCCeeEEEEcccCCcceEEEEcC-------CCeEEEEeccCCC------ceeeeeccccccCCCeEEEEE
Q 022590 207 LQK---YPVPECDIWFIKFSCDFHYNAAAIGNR-------EGKIFVWELQSSP------PVLIARLSHAQSKSPIRQTAM 270 (294)
Q Consensus 207 ~~~---~~~~~~~i~~~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~------~~~~~~~~~~~~~~~v~~~~~ 270 (294)
+.. .+........+.+..... .+++.|+. -+.+..||+.+.+ ......... .....- +++.
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~~R~~~-~~~~ 604 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSK-QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-FQRYGS-QIKY 604 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTT-EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-GCCBSC-EEEE
T ss_pred ccCCCCCCCcccceeEEEEeCCCC-EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-CCcccc-eEEE
Confidence 111 111222223344444311 46666654 2468999998886 222222110 111111 2333
Q ss_pred ccCCCEEEEeccC--------CcEEEEecCC
Q 022590 271 SYDGSTILSCCED--------GAIWRWDAIP 293 (294)
Q Consensus 271 s~~~~~l~s~~~d--------g~i~vw~~~~ 293 (294)
..++++++.|+.+ ..+.+||+.+
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 3337777778743 4588888764
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.99 E-value=0.67 Score=39.90 Aligned_cols=244 Identities=11% Similarity=0.041 Sum_probs=119.3
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
.|.++... +++. .|-.|+. +-+..++..+++...........|.++.... ++.+.+ |+.+| +.+++..+++..
T Consensus 192 ~i~~i~~d--~~~~-~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gT~~G-l~~~~~~~~~~~ 264 (758)
T 3ott_A 192 FVNSLLED--TTRQ-CVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDG-NGDLLA-GTDNG-LYVYHNDTTPLQ 264 (758)
T ss_dssp CEEEEEEE--TTTT-EEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECT-TCCEEE-EETTE-EEEECCTTSCCE
T ss_pred eeEEEEEE--CCCC-EEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcC-CCCEEE-EeCCc-eeEEecCCCcEE
Confidence 36666654 5555 4555554 4578888776543221111234688888776 555544 45544 778887665543
Q ss_pred EEeecc----CCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCC
Q 022590 90 LIFAGA----GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 165 (294)
Q Consensus 90 ~~~~~~----~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (294)
...... .-....|.++.... ++. |-.|+..| +.++....... ...... . ......
T Consensus 265 ~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWiGT~~G-l~~~~~~~~~~----~~~~~~-------------~-~~~~~~ 323 (758)
T 3ott_A 265 HIIHDSRNIQSLTNNIIWNIFADQ-EHN-IWLGTDYG-ISLSRYNSALQ----FIPISQ-------------I-TGTGDG 323 (758)
T ss_dssp EECCCTTCTTSCSCSCEEEEEECT-TCC-EEEEESSS-EEEECCCC-CE----EEEHHH-------------H-SCSCCC
T ss_pred EEEcCCCCcCcCCcCeEEEEEEcC-CCC-EEEEeCCc-ccccccCCcee----EEeccc-------------C-CCCCCC
Confidence 222110 01234588888776 555 55555556 54443221000 000000 0 000112
Q ss_pred Cceeeccee-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeee----eeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 166 NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ----KYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 166 ~~i~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
..|.++.-+ ...|..|+.+ -+..++..++.... ..... ........|.++.-..++ .|-.|+ ++-+
T Consensus 324 ~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~v~~i~~d~~g---~lWigt-~~GL 394 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHD----AIWYRMGDKTYPLSHNRIRHIYEDKEQ---QLWIAT-DGSI 394 (758)
T ss_dssp CBEEEEEECTTCCEEEEETT-EEEEESCTTSSCCC----CEEECTTCSSSCCSCSCEEEEEECTTS---CEEEEE-TTEE
T ss_pred ceEEEEEEcCCCCEEEeeCC-cceeecccccccce----eEEeccCCcCCCCCCCceEEEEECCCC---CEEEEe-CCcH
Confidence 345565554 3445555654 46667665432110 00000 001122456777666665 244455 4568
Q ss_pred EEEeccCCCceeeeecccc--ccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 241 FVWELQSSPPVLIARLSHA--QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 241 ~i~d~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
..||..+.+.......... .....|.++...++|++.+ |+..+-|.++|.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~ 446 (758)
T 3ott_A 395 NRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDK 446 (758)
T ss_dssp EEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEH
T ss_pred hhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEcc
Confidence 8999877642222111100 1234588888888776555 554444666663
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.87 E-value=0.72 Score=39.30 Aligned_cols=106 Identities=13% Similarity=0.128 Sum_probs=57.0
Q ss_pred CCceEEEEeecC----CeEEEEEcCCcccccee--------cccCcceEEEEeCCCCCceEEEeeCCC------cEEEEE
Q 022590 21 DGIPFLVAGGIN----GIIRVIDVSNEKLHKSF--------VGHGDSINEIRTQPLKPSLVVSASKDE------SVRLWN 82 (294)
Q Consensus 21 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~~l~s~~~dg------~i~vwd 82 (294)
++. +++.|+.+ ..+.+||..+++-...- ......-..+.+.. ++.+++.|+.++ .+.+||
T Consensus 397 ~~~-iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GND-VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSC-EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCE-EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEe
Confidence 455 77777753 46888888776432211 11112223344432 456777777543 477888
Q ss_pred cCCCceEEEeeccCCCCCceeEEEEecCCCceEEeeecCC--cEEEEeccc
Q 022590 83 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--TVKIWSMKE 131 (294)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg--~i~~wd~~~ 131 (294)
..+.+-... ... .....-.+.+... ++.+++.|+.++ .+.+||+.+
T Consensus 475 ~~t~~W~~~-~~~-p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 475 MKTREWSMI-KSL-SHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp TTTTEEEEC-CCC-SBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTT
T ss_pred CCCCcEEEC-CCC-CCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCC
Confidence 877543322 111 0111112233323 677888887655 688888877
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.70 E-value=0.065 Score=37.90 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=59.6
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcc--------eEEEEeCCCCCceEEEeeCCCcEEEE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS--------INEIRTQPLKPSLVVSASKDESVRLW 81 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~~l~s~~~dg~i~vw 81 (294)
.+..++|. |+|. +.++ .+|.+.-.+..+... ..+.+-... ..++.|.| ++.+.++ .||.|.-+
T Consensus 42 ~~~~laf~--P~G~-LYaV--~~G~Ly~~~~~t~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 42 NFKFLFLS--PGGE-LYGV--LNDKIYKGTPPTHDN-DNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TCSEEEEC--TTSC-EEEE--ETTEEEEESCCCSTT-CCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEE
T ss_pred cceeEEEC--CCcc-EEEE--eCCeEEEECCCCCCc-ccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEe
Confidence 45566765 8997 4444 778776666544322 111111223 37899999 7777666 56988777
Q ss_pred EcCCCceE------EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEE
Q 022590 82 NVQTGICI------LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 125 (294)
Q Consensus 82 d~~~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~ 125 (294)
+..+...- ..+-. .-=..+..|.|.| ++.+.++. |+.++
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~--~gw~~~~~lff~p-~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGS--GGWSGFKFLFFHP-NGYLYAVH--GQQFY 157 (236)
T ss_dssp SCCCSTTCCHHHHSEEEEC--SSGGGEEEEEECT-TSCEEEEE--TTEEE
T ss_pred CCCcCCCCceeccccEecc--CCCCceEEEEECC-CceEEEEe--CCcEE
Confidence 65332111 11110 1114679999999 88766555 77744
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.51 E-value=1.1 Score=38.66 Aligned_cols=230 Identities=12% Similarity=0.089 Sum_probs=118.6
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
..|.++.-. .+|. |-.|+.+| +..||..+.+...........|.++... ++. |..++.+ -+..+|..+++.
T Consensus 63 ~~i~~i~~d--~~g~--lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~--~g~-lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 63 TRIYCGVII--DNTY--LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ--GDT-LWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SCEEEEEEE--TTTE--EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE--TTE-EEEEETT-EEEEEETTTCCE
T ss_pred ceEEEEEEc--CCCc--EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec--CCc-EEEEcCC-cceeEeCCCCeE
Confidence 457777654 6664 66666665 7889987764332111123357777543 444 4555555 477888876554
Q ss_pred EEEeec--cCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCC
Q 022590 89 ILIFAG--AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN 166 (294)
Q Consensus 89 ~~~~~~--~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
. .+.. ..-....|.++.... ++.+. .|+.+ -+..++........ +. .+.. ......
T Consensus 134 ~-~~~~~~~~l~~~~i~~i~~d~-~g~lW-igt~~-Gl~~~~~~~~~~~~---~~---~~~~------------~~~~~~ 191 (758)
T 3ott_A 134 T-SFDTRRNGLPNNTIYSIIRTK-DNQIY-VGTYN-GLCRYIPSNGKFEG---IP---LPVH------------SSQSNL 191 (758)
T ss_dssp E-EECHHHHCCSCSCEEEEEECT-TCCEE-EEETT-EEEEEETTTTEEEE---EC---CCCC------------TTCSSC
T ss_pred E-EeccCCCCcCCCeEEEEEEcC-CCCEE-EEeCC-CHhhCccCCCceEE---ec---CCCc------------cccccc
Confidence 3 2310 001234688888776 55544 45544 47777765421100 00 0000 000122
Q ss_pred ceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEe
Q 022590 167 YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 244 (294)
Q Consensus 167 ~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d 244 (294)
.|.++..+ ++.|..|+. +.+..+|..+.+. .....+ ....|.++....++ .|..|+.+ -+.+++
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~-------~~~~~l--~~~~i~~i~~d~~g---~lWigT~~-Gl~~~~ 257 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI-------KQTEAF--HNNSIKSLALDGNG---DLLAGTDN-GLYVYH 257 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE-------EEEEEE--EEEEEEEEEECTTC---CEEEEETT-EEEEEC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE-------EeccCC--CCCeEEEEEEcCCC---CEEEEeCC-ceeEEe
Confidence 35666555 455555554 4688888765421 111111 12346666666665 34445544 578888
Q ss_pred ccCCCceeeeecc---ccccCCCeEEEEEccCCCEEEEeccCC
Q 022590 245 LQSSPPVLIARLS---HAQSKSPIRQTAMSYDGSTILSCCEDG 284 (294)
Q Consensus 245 ~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~dg 284 (294)
..+.+........ ..-....|.++....+|.+-+.. ..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT-~~G 299 (758)
T 3ott_A 258 NDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT-DYG 299 (758)
T ss_dssp CTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE-SSS
T ss_pred cCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe-CCc
Confidence 7765422111110 11123468999888888755543 445
No 338
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.88 E-value=0.96 Score=34.69 Aligned_cols=104 Identities=14% Similarity=0.050 Sum_probs=59.3
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccc--cee----cccCcceEEEEeCCC---CCceEEEee--CCCcE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLH--KSF----VGHGDSINEIRTQPL---KPSLVVSAS--KDESV 78 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~----~~h~~~v~~~~~~~~---~~~~l~s~~--~dg~i 78 (294)
.-..++|. |+|+ ++++--..|.|++++..+++.. ..+ .........|+++|+ ++.+.++-+ .++.|
T Consensus 33 ~P~~ia~~--pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 33 SPWGLAPL--PGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SEEEEEEC--TTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CceEEEEc--CCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34567776 9998 6666555899999986655431 111 223456899999993 344444322 34455
Q ss_pred EEEEcCCC--------ceEE---EeeccCCCCCceeEEEEecCCCceEEeee
Q 022590 79 RLWNVQTG--------ICIL---IFAGAGGHRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 79 ~vwd~~~~--------~~~~---~~~~~~~~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
.-|.+..+ +... .+.....| .-..|.|.| ++.++++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgp-DG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGP-DKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECT-TSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCC-CCCEEEEEC
Confidence 55555431 1111 12211123 346799999 777666654
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.25 E-value=2.6 Score=33.73 Aligned_cols=107 Identities=12% Similarity=0.168 Sum_probs=57.1
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcccc--ceecc------cCcceEEEEeCCC---CCceEEEeeC----
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLH--KSFVG------HGDSINEIRTQPL---KPSLVVSASK---- 74 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~------h~~~v~~~~~~~~---~~~~l~s~~~---- 74 (294)
.-..++|. |+|+ ++++-...+.|++++..+++.. ..+.. .......|+|+|+ ++.+.++-+.
T Consensus 28 ~P~~~a~~--pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 28 KPHALLWG--PDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SEEEEEEC--TTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CceEEEEc--CCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 34567776 9998 5555444457988886555432 12211 2456779999994 4444444332
Q ss_pred --------CCcEEEEEcCCC--c---eEEEeec-cCCCCCceeEEEEecCCCceEEeeec
Q 022590 75 --------DESVRLWNVQTG--I---CILIFAG-AGGHRNEVLSVDFHPSDIYRIASCGM 120 (294)
Q Consensus 75 --------dg~i~vwd~~~~--~---~~~~~~~-~~~~~~~v~~l~~~~~~~~~l~~~~~ 120 (294)
...|.-++...+ . ....+.. ..........|+|.| ++.++++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 124544554322 1 1111111 111123478999999 7776666543
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.17 E-value=1.9 Score=31.92 Aligned_cols=221 Identities=13% Similarity=0.078 Sum_probs=113.4
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 88 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 88 (294)
..|..++.. . ...++. . ||.|..|-......+..-......|..++... . ..++. . ||.|..|-......
T Consensus 24 ~~i~~ia~G--~--~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~-~-hs~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 24 SGVDAIAGG--Y--FHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-Y-HSLAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SSCCEEEEC--S--SEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS-S-EEEEE-E-TTEEEEEECCTTST
T ss_pred CCCcEEEeC--C--CeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC-C-EEEEE-E-CCEEEEeeCCCCCC
Confidence 356666653 2 213333 5 99999998654322221111234677787764 2 33343 4 89999997654322
Q ss_pred EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCce
Q 022590 89 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 168 (294)
Q Consensus 89 ~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (294)
+..-. .-...|..++... .+.++ -. ||.|..|-.....+... + ......|
T Consensus 94 lg~P~---~~~~~v~~ia~G~--~hs~a-l~-~G~v~~wG~n~~gqlg~-------------------~----~~~~~~i 143 (282)
T 3qhy_B 94 TTVPA---EARSGVDAIAAGA--WASYA-LK-DGKVIAWGDDSDGQTTV-------------------P----AEAQSGV 143 (282)
T ss_dssp TCCCG---GGSSSEEEEEEET--TEEEE-EE-TTEEEEEECCTTSTTSC-------------------C----GGGGSSE
T ss_pred CCCCc---ccCCCeEEEECcC--CEEEE-Ee-CCeEEEecCCCCCcCCC-------------------C----ccCCCCe
Confidence 21111 1234677777753 33333 34 99999998765322100 0 0011234
Q ss_pred eecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCC
Q 022590 169 DCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 248 (294)
Q Consensus 169 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 248 (294)
..++.-....+.-. ||.+..|-.....+... +. .....+..++..... .++. .+|.++.|=....
T Consensus 144 ~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~--p~-------~~~~~v~~i~~G~~h---s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 144 TALDGGVYTALAVK-NGGVIAWGDNYFGQTTV--PA-------EAQSGVDDVAGGIFH---SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp EEEEECSSEEEEEE-TTEEEEEECCTTSTTSC--CG-------GGGSSEEEEEECSSE---EEEE--ETTEEEEEECCTT
T ss_pred EEEEcccCEEEEEE-CCEEEEecCCCCCCCCC--ce-------ecCCCeEEEEecCCE---EEEE--ECCeEEEEECCCC
Confidence 44443333333334 79999997665332210 00 002345555544332 3444 5899999976654
Q ss_pred CceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 249 PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
...-... .....|..++.......+++ ||.|+.|-.
T Consensus 209 gqlg~p~----~~~~~v~~i~~G~~h~~al~---~g~v~~wG~ 244 (282)
T 3qhy_B 209 KQTTVPT----EALSGVSAIASGEWYSLALK---NGKVIAWGS 244 (282)
T ss_dssp STTCCCG----GGGSSCCEEEECSSCEEEEE---TTEEEEEST
T ss_pred CCCCCCc----ccCCCceEEEcCCCEEEEEE---CCEEEEecC
Confidence 3221111 11235777776554333333 888988854
No 341
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.38 E-value=3 Score=32.06 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=44.1
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE--EEeeccCCCCCceeEEEEecC---CCceEEeeecC-----Cc
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI--LIFAGAGGHRNEVLSVDFHPS---DIYRIASCGMD-----NT 123 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~l~~~~~---~~~~l~~~~~d-----g~ 123 (294)
.....|+|.| ++++++ +..+|.|.+++ .++.. ..+.....-......|+++|+ ++.++++-... +.
T Consensus 31 ~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3567999999 777555 45669999988 44321 111111112456899999993 24544444432 56
Q ss_pred EEEEeccc
Q 022590 124 VKIWSMKE 131 (294)
Q Consensus 124 i~~wd~~~ 131 (294)
|..++...
T Consensus 107 v~r~~~~~ 114 (352)
T 2ism_A 107 VVRLRHLG 114 (352)
T ss_dssp EEEEEECS
T ss_pred EEEEEeCC
Confidence 66666653
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.86 E-value=3.5 Score=31.74 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=43.7
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc-eEEEeeccCCCCCceeEEEEecC---CCceEEeeec---C----C
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI-CILIFAGAGGHRNEVLSVDFHPS---DIYRIASCGM---D----N 122 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~---~~~~l~~~~~---d----g 122 (294)
.....|+|.| ++++++ +..+|.|++++. .++ .+..+.....-......|+++|+ ++.++++-.. + +
T Consensus 29 ~~P~~ia~~p-dG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4568899999 777555 556699999873 454 22211111112356899999993 3554444432 2 4
Q ss_pred cEEEEeccc
Q 022590 123 TVKIWSMKE 131 (294)
Q Consensus 123 ~i~~wd~~~ 131 (294)
.|..|+...
T Consensus 106 ~v~r~~~~~ 114 (354)
T 3a9g_A 106 RVIRGRLDG 114 (354)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 566666543
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.88 E-value=6 Score=32.64 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=51.0
Q ss_pred eeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc-----------eeeeeccccccCCCeEEEEEccCCCEEEEeccCCc
Q 022590 217 IWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP-----------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 285 (294)
Q Consensus 217 i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 285 (294)
...+.++|+|+ .++++|-.+.++.++|++.... ...... .-.......+|.++|....|---|..
T Consensus 325 PHGv~vsPDGk-yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~---e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 325 PHGCNTSSDGK-YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP---ELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp CCCEEECTTSC-EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC---BCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CcceeeCCCCC-EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec---cCCCcccEEEECCCCceEeeeeecce
Confidence 45688999997 4667778899999999985211 111111 12245678999999966666678999
Q ss_pred EEEEecC
Q 022590 286 IWRWDAI 292 (294)
Q Consensus 286 i~vw~~~ 292 (294)
|--|++.
T Consensus 401 vvkWni~ 407 (638)
T 3sbq_A 401 VVKWNME 407 (638)
T ss_dssp EEEEEHH
T ss_pred EEEEecc
Confidence 9999975
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.21 E-value=3.5 Score=36.66 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=47.6
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeeccCC--CCCceeEEEEecCCCceEEee---ecCCcEEEEec
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGG--HRNEVLSVDFHPSDIYRIASC---GMDNTVKIWSM 129 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~~l~~~---~~dg~i~~wd~ 129 (294)
.+.+++..+ +..++++-+.|+++|+|++.+++++........ ...........|..+.++.+- ..+|..++|.+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~ 315 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKL 315 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEE
Confidence 467777777 778999999999999999999998887643211 111112223334333333322 34577778876
Q ss_pred cc
Q 022590 130 KE 131 (294)
Q Consensus 130 ~~ 131 (294)
..
T Consensus 316 ~~ 317 (950)
T 4gq2_M 316 NA 317 (950)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 345
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=88.95 E-value=2.5 Score=34.22 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=47.5
Q ss_pred CeeEEEEccc----CCcceEEEEcCCCeEEEEeccCCC------ceeeeeccccccCCCeEEEEEccCCCEEEEeccCCc
Q 022590 216 DIWFIKFSCD----FHYNAAAIGNREGKIFVWELQSSP------PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 285 (294)
Q Consensus 216 ~i~~~~~~~~----~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 285 (294)
..++++...- +.+..+..|+.+|.|.-.-+.... ......+.......+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 3566665543 556788899999988755443221 112222222123478999999999999999999887
Q ss_pred EEE
Q 022590 286 IWR 288 (294)
Q Consensus 286 i~v 288 (294)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 346
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=87.53 E-value=2.6 Score=34.55 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=50.4
Q ss_pred CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc--eeeeeccccccCCCeE-EEEEccCCCEEEEeccCCcEEE
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIR-QTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~v 288 (294)
.++.++....+.+..+..|+.+|.|.-..+..... .....+.......+|. .|.+++++.+|..++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 46677777766677899999999988776654321 1222222223346785 8999999999999988876654
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.35 E-value=9.6 Score=29.25 Aligned_cols=83 Identities=12% Similarity=0.067 Sum_probs=49.2
Q ss_pred eeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCceeeeecc--ccccCCCeEEEEEccC---CCEEEEe-
Q 022590 207 LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS--HAQSKSPIRQTAMSYD---GSTILSC- 280 (294)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~s~- 280 (294)
+..+...-...+.++|.|++ .++++-...|.|++++...++......+. ..........|+++|+ +.+|...
T Consensus 24 ~~~va~gL~~P~~ia~~pdG--~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGG--DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eEEeecCCCCceEEEEcCCC--cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 33444444567899999998 46666555899999987655433222221 1123456889999995 3344332
Q ss_pred --ccCCcEEEEec
Q 022590 281 --CEDGAIWRWDA 291 (294)
Q Consensus 281 --~~dg~i~vw~~ 291 (294)
..++.|.-|.+
T Consensus 102 t~~~~~~v~R~~~ 114 (347)
T 3das_A 102 TSASDNRIVRMLY 114 (347)
T ss_dssp ECSSSEEEEEEEB
T ss_pred ecCCCCEEEEEEe
Confidence 23444554544
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.56 E-value=22 Score=31.76 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=30.6
Q ss_pred ceeEEEEecCCCceEEeeecCCcEEEEeccccccccccce
Q 022590 101 EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSF 140 (294)
Q Consensus 101 ~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 140 (294)
.+.++...+ +..++++-+.|+++|+|++.++.......+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467777776 778899999999999999999765544433
No 349
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=83.90 E-value=10 Score=32.01 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=45.7
Q ss_pred eeEEEE----cccCCcceEEEEcCCCeEEEEec-cCCC-----ceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcE
Q 022590 217 IWFIKF----SCDFHYNAAAIGNREGKIFVWEL-QSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 286 (294)
Q Consensus 217 i~~~~~----~~~~~~~~l~~~~~dg~i~i~d~-~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 286 (294)
.+.++. .+++.+..+..|+.+|.|.-.-+ .... ...+..+.......+|..|.++++.++|..++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 445554 23454567889999999864322 2211 1122222222455789999999999999999998876
Q ss_pred EE
Q 022590 287 WR 288 (294)
Q Consensus 287 ~v 288 (294)
+|
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.42 E-value=4.5 Score=33.36 Aligned_cols=72 Identities=11% Similarity=0.069 Sum_probs=51.3
Q ss_pred cceEEEEeCCCCCceEEE-eeCCCcEEEEEcCCC------ce-------EEEeeccCCCCCceeEEEEecCCCceEEeee
Q 022590 54 DSINEIRTQPLKPSLVVS-ASKDESVRLWNVQTG------IC-------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 119 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s-~~~dg~i~vwd~~~~------~~-------~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~ 119 (294)
.....+..+| ++++++. |-.+.++.++|++.- +. ..... -.......+|.+ +++...+.-
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e----~GlGPlHt~Fd~-~G~aYTtlf 396 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE----LGLGPLHTTFDG-RGNAYTTLF 396 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB----CCSCEEEEEECS-SSEEEEEET
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc----CCCcccEEEECC-CCceEeeee
Confidence 3456788999 6666555 556889999998742 11 11221 345678899998 777677777
Q ss_pred cCCcEEEEeccc
Q 022590 120 MDNTVKIWSMKE 131 (294)
Q Consensus 120 ~dg~i~~wd~~~ 131 (294)
.|..|..|++..
T Consensus 397 idSqvvkWni~~ 408 (638)
T 3sbq_A 397 IDSQVVKWNMEE 408 (638)
T ss_dssp TTTEEEEEEHHH
T ss_pred ecceEEEEeccH
Confidence 999999999986
No 351
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=83.23 E-value=7.6 Score=31.76 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=48.1
Q ss_pred CeeEEEEcccCCcceEEEEcCCCeEEEEecc-CCCceeeeeccccccCCCe-EEEEEccCCCEEEEeccCCcEEE
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQ-SSPPVLIARLSHAQSKSPI-RQTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~v 288 (294)
..+.++......+..+..|+.+|.|.-.-+. .........+.. ....+| ..|.++++..+|..++.++.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 4666666655555778889999998865554 222222222222 334577 48999999999999998887765
No 352
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=80.03 E-value=12 Score=31.14 Aligned_cols=61 Identities=7% Similarity=0.058 Sum_probs=40.7
Q ss_pred cceEEEEcCCCeEEEEeccCCC----ceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEE
Q 022590 228 YNAAAIGNREGKIFVWELQSSP----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 228 ~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~v 288 (294)
+..+..|+.+|.|.-.-+.... ......+.......+|..|.++++...|..++.++.++|
T Consensus 380 ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 380 FHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred eEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4578889999998755443322 112222222134568999999999999999988887665
No 353
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=78.25 E-value=10 Score=32.13 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=45.7
Q ss_pred CeeEEEEc----ccC-CcceEEEEcCCCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCC--CEEEEeccCCcEEE
Q 022590 216 DIWFIKFS----CDF-HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG--STILSCCEDGAIWR 288 (294)
Q Consensus 216 ~i~~~~~~----~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~v 288 (294)
..+.++.. .++ .+..++.|+.+|.|.-.-....+......+..-....+|..|.++++. .+|..++.++.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 34556553 232 245788899999986543322222222222222345789999999988 99999988886664
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.99 E-value=27 Score=28.06 Aligned_cols=113 Identities=9% Similarity=-0.001 Sum_probs=56.1
Q ss_pred eeeccee--cc-eEEEeeCCCeEEEecCCCCCCCCCCCCceeeee-ee-----cCCCCeeEEEEccc----CCcceEEEE
Q 022590 168 VDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQK-YP-----VPECDIWFIKFSCD----FHYNAAAIG 234 (294)
Q Consensus 168 i~~~~~~--~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~-----~~~~~i~~~~~~~~----~~~~~l~~~ 234 (294)
-..|+|. +. .++++...|.|++++........ ....+.. +. .....+..++|+|+ +. .|++-.
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~---~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKE---PYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSS---CSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEE
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeee---eecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEe
Confidence 3455554 43 46666888999999754321100 0000000 11 12456788999996 31 233222
Q ss_pred c-CC----------CeEEEEeccCC--------CceeeeeccccccCCCeEEEEEccCCCEEEEeccCC
Q 022590 235 N-RE----------GKIFVWELQSS--------PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 284 (294)
Q Consensus 235 ~-~d----------g~i~i~d~~~~--------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 284 (294)
. .+ ..|.-|.+... +...+..+........-..|+|.|||.+.++.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 11 14444665431 111222222112223468899999998777765443
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.63 E-value=5.9 Score=33.71 Aligned_cols=37 Identities=8% Similarity=0.169 Sum_probs=30.1
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEeec
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 94 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 94 (294)
.|.++.+ +..++++-+.|.++|+|++.+++++.....
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666555 357999999999999999999998877664
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.12 E-value=2.7 Score=38.17 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEEee
Q 022590 55 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFA 93 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 93 (294)
.+.+++..+ +..++++-+.|+++|+|++.+++++....
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344555556 67899999999999999999999988765
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=74.16 E-value=16 Score=30.39 Aligned_cols=60 Identities=7% Similarity=-0.064 Sum_probs=38.6
Q ss_pred CeeEEEEcccCCcceEEEEcCC------------CeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEe
Q 022590 216 DIWFIKFSCDFHYNAAAIGNRE------------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC 280 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 280 (294)
..-.|+|+|.+ +++++-+.+ +.+.+.+..+++....... .....++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G--~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~---P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAG--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTC--CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC---CTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCC--CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC---CCCccCcCeeECCCCCEEEEE
Confidence 34668999988 444443322 3455666666654333332 345789999999999988775
No 358
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=73.91 E-value=12 Score=31.86 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=47.4
Q ss_pred CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC--ceeeeeccccccCCCe-EEEEEccCCCEEEEeccCCcEEE
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP--PVLIARLSHAQSKSPI-RQTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~v 288 (294)
..+.++....+.+..+..|+.+|.|.-.-+.... ......+.......+| ..|.++++..+|..++.++.++|
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3455555555556788899999998866554321 1222222211234566 68999999899999988876665
No 359
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=72.81 E-value=47 Score=28.89 Aligned_cols=112 Identities=12% Similarity=0.013 Sum_probs=59.0
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc-------cCcceEEEEeCCCCCceEEEeeCCCc---
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-------HGDSINEIRTQPLKPSLVVSASKDES--- 77 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~l~s~~~dg~--- 77 (294)
.+.|.+|++. |.....++++...+.|...+ +.++.-..+.. ....|.+|++.|.+...++.+..+..
T Consensus 14 ~g~i~~i~~~--p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~ 90 (789)
T 1sqj_A 14 GGYITGIVAH--PKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDE 90 (789)
T ss_dssp CSCEEEEEEC--SSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSS
T ss_pred CCcEEEEEEC--CCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCc
Confidence 4688999997 43322567777777665554 23332222221 12469999999855455555443211
Q ss_pred -EEEE-EcCCCceEEEeeccCC------CCCceeEEEEecCCCceEEeeecCC
Q 022590 78 -VRLW-NVQTGICILIFAGAGG------HRNEVLSVDFHPSDIYRIASCGMDN 122 (294)
Q Consensus 78 -i~vw-d~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~~l~~~~~dg 122 (294)
-.|| ..+.|+.-..+..... ....+..++++|.+...++.+...+
T Consensus 91 ~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 91 WAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp CCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred ccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 3344 3444554444332100 0113567888885566666665333
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=72.51 E-value=29 Score=26.33 Aligned_cols=244 Identities=9% Similarity=0.016 Sum_probs=121.9
Q ss_pred EEEEeecCCeEEEEEcCCcc---------ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEE---EcCCC------
Q 022590 25 FLVAGGINGIIRVIDVSNEK---------LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW---NVQTG------ 86 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vw---d~~~~------ 86 (294)
.+++-+.+|.|+=-.+.+-+ .-..++ ..+.+..+.... ....|+.-+..|.+.-. ++...
T Consensus 5 v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 5 VVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred EEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 78888999999876643311 111222 233444444443 34455555666765443 44322
Q ss_pred ceEEEeeccCCCCCceeEEEEecC--CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 87 ICILIFAGAGGHRNEVLSVDFHPS--DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~l~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
..+..+-.+ .....|.++..-+. +..+++..+.+|.++--.+......... ......+..
T Consensus 83 ~~i~~~l~l-~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~----------------G~~~i~lke- 144 (327)
T 3uc1_A 83 QHVANLLAF-QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSG----------------GIVAVNLRD- 144 (327)
T ss_dssp EEHHHHTTC-CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSS----------------CEESCBCCT-
T ss_pred EEHHHccCC-CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccC----------------ceEEEEECC-
Confidence 222111111 13445666544431 4678999999999999888774321110 001111111
Q ss_pred CCceeecce-e-cceEEEeeCCCeEEEecCC--CCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeE
Q 022590 165 SNYVDCNRW-L-GDFILSKSVDNEIVLWEPK--MKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 240 (294)
Q Consensus 165 ~~~i~~~~~-~-~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 240 (294)
.+.+..+.. + .+.++..+..|.+..+... .-..............+. ....|..+...+.. ..++..+..|.+
T Consensus 145 ~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~--~~ll~~T~~G~~ 221 (327)
T 3uc1_A 145 NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREG--TYLLVATSGGYA 221 (327)
T ss_dssp TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTT--CEEEEEETTSEE
T ss_pred CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCC--CEEEEEeCCCcE
Confidence 122222222 1 4567777888988777666 221111100111111222 23456665555444 478888899999
Q ss_pred EEEeccCCCce-----eeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 241 FVWELQSSPPV-----LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 241 ~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
+.-.+...... -...+........+..+....+...++..+.+|.+.-++.
T Consensus 222 Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 222 KRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEeh
Confidence 98887543211 1111221121234555554444556666677777666654
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=70.37 E-value=30 Score=25.50 Aligned_cols=211 Identities=10% Similarity=-0.062 Sum_probs=106.6
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEE---cCCccccceecccCcceEEEEeCCC-CCceEEEeeCCCcEEEEEcC
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVID---VSNEKLHKSFVGHGDSINEIRTQPL-KPSLVVSASKDESVRLWNVQ 84 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~---~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~ 84 (294)
+.+..+.-. .... .|+.-+.+|.++--. +........+. ....|..+.. +. +...++..+.+|.++-..+.
T Consensus 24 D~~~~~~~~--~t~~-~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 24 APVVNILRV--PFTE-GLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp CCEEEEEEE--ETTS-CEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGG
T ss_pred CeEEEEEEE--CCCC-EEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHH
Confidence 445555444 2233 566777788876543 33221111133 3455666543 31 35688999999999988875
Q ss_pred CCc----eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 85 TGI----CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 85 ~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
.-. -...+. + .-.+.+..+.... +...++..+..|.+..+............. ..+...
T Consensus 99 ~~~~~~~G~~~i~-l-kegD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~--------------Gv~~i~ 161 (276)
T 3no0_A 99 EFEYKAQGMPIIK-L-TEGDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGAR--------------GVQGIK 161 (276)
T ss_dssp GTTTCSTTEECSC-C-CTTCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCC--------------CEECCC
T ss_pred HhhhhcCCeEEEe-c-CCCCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCC--------------CEEEEc
Confidence 432 111111 1 1234555555554 455677788899988887765221100000 011111
Q ss_pred eecCCCceeecce-e-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 161 ASVHSNYVDCNRW-L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 161 ~~~~~~~i~~~~~-~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
+.. ...|..+.. . +..++..+..|.++...+..-........ -+..+ .....+..+...... ..++..+.+|
T Consensus 162 L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gk--Gv~~i-~~~~~lv~~~~~~~~--~~i~~~t~~G 235 (276)
T 3no0_A 162 LEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVK--GTEVS-GTKDTLVDLIPIKEE--VELLITTKNG 235 (276)
T ss_dssp CCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCC--CEECC-CSSSCEEEEEEESSE--EEEEEEETTS
T ss_pred cCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCc--ceEEE-cCCCcEEEEEEeCCC--CEEEEEcCCC
Confidence 111 123333222 2 55788888899888877654332111101 11111 223344444333222 3566677788
Q ss_pred eEEE--EeccC
Q 022590 239 KIFV--WELQS 247 (294)
Q Consensus 239 ~i~i--~d~~~ 247 (294)
.+.. ++...
T Consensus 236 ~~ir~~~~~~~ 246 (276)
T 3no0_A 236 KAFYDKINQKD 246 (276)
T ss_dssp CEEEEEEEGGG
T ss_pred eEEEeeeCHHH
Confidence 8877 87654
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.11 E-value=22 Score=32.47 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=29.2
Q ss_pred ceeEEEEecCCCceEEeeecCCcEEEEeccccccccccce
Q 022590 101 EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSF 140 (294)
Q Consensus 101 ~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 140 (294)
.+.+++..+ +..++++-+.|+++|+|++.++.......+
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 445556666 778899999999999999999765544433
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.28 E-value=32 Score=28.56 Aligned_cols=61 Identities=7% Similarity=-0.081 Sum_probs=37.7
Q ss_pred CCeeEEEEcccCCcceEEEEcC------------CCeEEEEeccCCCceeeeeccccccCCCeEEEEEccCCCEEEEe
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNR------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC 280 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 280 (294)
.....|.|.+++. +.++.+. .+.+..++..+++....... .....++.++|+||++.|+.+
T Consensus 476 nsPDnL~fd~~G~--LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~---P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGR--LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCC--EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC---CTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCC--EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC---CCCccccCCEECCCCCEEEEE
Confidence 3456789999883 4442221 22566666666653333221 223568999999999988775
No 364
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=69.15 E-value=48 Score=27.46 Aligned_cols=72 Identities=8% Similarity=0.091 Sum_probs=46.1
Q ss_pred eeEEEEcc----cCCcceEEEEcCCCeEEEEeccC------CCceeeeeccc-c--------ccCCCeEEEEEccCCCEE
Q 022590 217 IWFIKFSC----DFHYNAAAIGNREGKIFVWELQS------SPPVLIARLSH-A--------QSKSPIRQTAMSYDGSTI 277 (294)
Q Consensus 217 i~~~~~~~----~~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~-~--------~~~~~v~~~~~s~~~~~l 277 (294)
.+.++... ++.+..++.|+.+|.|.-.-+.. .+...+..+.. . ....+|..|.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 46776664 34457888999999986443322 11112222210 0 124678999999999999
Q ss_pred EEeccCCcEEE
Q 022590 278 LSCCEDGAIWR 288 (294)
Q Consensus 278 ~s~~~dg~i~v 288 (294)
..++.++.++|
T Consensus 485 YV~s~~~V~qV 495 (565)
T 3oky_B 485 YVAFSTCVIKV 495 (565)
T ss_dssp EEECSSCEEEE
T ss_pred EEEecCeEEEe
Confidence 99999887775
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.64 E-value=9.8 Score=32.43 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=27.7
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceec
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV 50 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 50 (294)
.|.++.+ +.. ++++-+.|+++|+|++.+++++.+..
T Consensus 223 ~Is~~~~----~~~-fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF----HER-YLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE----TTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc----CCc-EEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555444 344 99999999999999999998776554
No 366
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.60 E-value=47 Score=26.72 Aligned_cols=106 Identities=18% Similarity=0.108 Sum_probs=56.7
Q ss_pred EEEEEeecCCCceEEEEeecCCeEEEEEcCCcc---ccceec---------ccCcceEEEEeCCC---CCceEEEeeCC-
Q 022590 12 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFV---------GHGDSINEIRTQPL---KPSLVVSASKD- 75 (294)
Q Consensus 12 ~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~---------~h~~~v~~~~~~~~---~~~~l~s~~~d- 75 (294)
..|+|. |+|...|+++...|.|++++.+... .+..+. ........|+|+|+ ++.+.++-+.+
T Consensus 17 ~~~a~~--pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 17 VGALHS--GDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp EEEECC--SSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred eEEEEC--CCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 456665 8873235566788999999754221 111111 11456789999993 24444443321
Q ss_pred -----------CcEEEEEcCC----------CceEEEee-ccCCCCCceeEEEEecCCCceEEeeecCC
Q 022590 76 -----------ESVRLWNVQT----------GICILIFA-GAGGHRNEVLSVDFHPSDIYRIASCGMDN 122 (294)
Q Consensus 76 -----------g~i~vwd~~~----------~~~~~~~~-~~~~~~~~v~~l~~~~~~~~~l~~~~~dg 122 (294)
..|.-|.+.. .+.+..+. ....| .-..|.|.| ++.++++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECT-TSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECC-CCcEEEEeCCCC
Confidence 1333355432 12222222 11234 468899999 777666665433
No 367
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=67.17 E-value=47 Score=26.59 Aligned_cols=64 Identities=16% Similarity=0.220 Sum_probs=38.5
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceEEE--eeccC---CCCCceeEEEEecC---CCceEEee
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILI--FAGAG---GHRNEVLSVDFHPS---DIYRIASC 118 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~---~~~~~v~~l~~~~~---~~~~l~~~ 118 (294)
.....|+|.| +++++++-...+.|++++..+++.... +.... .....+..|+|+|+ ++.+.++-
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3567999999 888777654445788887655543322 22100 12456789999994 44444443
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.51 E-value=45 Score=25.81 Aligned_cols=70 Identities=11% Similarity=0.005 Sum_probs=37.6
Q ss_pred ceEEEEeCCCC-CceEEEeeCCCcEEEEEcCCCceEEEeecc----------------CCCCCceeEEEEecCCCceEEe
Q 022590 55 SINEIRTQPLK-PSLVVSASKDESVRLWNVQTGICILIFAGA----------------GGHRNEVLSVDFHPSDIYRIAS 117 (294)
Q Consensus 55 ~v~~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----------------~~~~~~v~~l~~~~~~~~~l~~ 117 (294)
.|.++++.|.+ ...|..++..+-|...+ ..++.-..+... ......+.+|.++|.+...+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 57889998743 45666666555544332 233333332210 0123468899998854455555
Q ss_pred eecCCcEE
Q 022590 118 CGMDNTVK 125 (294)
Q Consensus 118 ~~~dg~i~ 125 (294)
+..++.|.
T Consensus 195 g~~~ggl~ 202 (394)
T 3b7f_A 195 GMSSGGVF 202 (394)
T ss_dssp EEETBEEE
T ss_pred EECCCCEE
Confidence 55454443
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.34 E-value=41 Score=28.10 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=38.4
Q ss_pred EEEEeCCCCCceEEEeeCC------------CcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEee
Q 022590 57 NEIRTQPLKPSLVVSASKD------------ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 118 (294)
Q Consensus 57 ~~~~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~ 118 (294)
--|+|+| .+.+++.-..+ ..+.+.+..+++....+.. .....++.++|+| ++..|++.
T Consensus 479 DNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~--P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECT-TSSEEEEE
T ss_pred cceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC--CCCccCcCeeECC-CCCEEEEE
Confidence 4588999 77766654322 2355667777777666664 2457899999999 66555544
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=57.56 E-value=64 Score=24.94 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=52.7
Q ss_pred EEEEeecCCeEEEEEcCC-cccccee--cccCcceEEEEeCCCCCceEEEeeCCC----cEEEEEcCCCceEEEeecc--
Q 022590 25 FLVAGGINGIIRVIDVSN-EKLHKSF--VGHGDSINEIRTQPLKPSLVVSASKDE----SVRLWNVQTGICILIFAGA-- 95 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~-~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~-- 95 (294)
.|.+|+..| +.+++... ++.-..+ ......|.+|++.|.+...|..++..| .|... .+.++.-..+...
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcccc
Confidence 577888777 55555432 2222211 122457999999985555566665555 33322 2334333322210
Q ss_pred -CC--------CCCceeEEEEecCC-CceEEeeecCCcEEEE
Q 022590 96 -GG--------HRNEVLSVDFHPSD-IYRIASCGMDNTVKIW 127 (294)
Q Consensus 96 -~~--------~~~~v~~l~~~~~~-~~~l~~~~~dg~i~~w 127 (294)
.. ....|.+|++.|.+ ...+.++...+.|...
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 00 11357889998744 5556666666655443
No 371
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=56.62 E-value=59 Score=24.25 Aligned_cols=87 Identities=11% Similarity=0.232 Sum_probs=43.4
Q ss_pred ecceecceEEEeeC-CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcC--CCeEEEEecc
Q 022590 170 CNRWLGDFILSKSV-DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR--EGKIFVWELQ 246 (294)
Q Consensus 170 ~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~ 246 (294)
.+.|.++.|+-.+. ...|...++..... ..+ .. ... ...+.|++. +|+-... ...|..-++.
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~-------~~l--~~---~~~-~~~~~P~g~--~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSE-------ALF--YD---CNC-YKPVVLDDT--NVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEE-------EEE--EC---SCE-EEEEEEETT--EEEEEEGGGTTEEEEECSS
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCE-------EEE--eC---CCc-cceeeecCC--EEEEEEcCCCcEEEEEECC
Confidence 44666666664443 56788888765431 111 11 122 234567774 4443332 2467777776
Q ss_pred CCCceeeeeccccccCCCeEEEEEccCCCEEEEe
Q 022590 247 SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC 280 (294)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 280 (294)
......+ .. ..+ ..|+|++++|.-+
T Consensus 216 G~~~~~L---t~----~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 216 NPNPVVL---TE----ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp SCCCEEC---SC----SCE--EEEEEETTEEEEE
T ss_pred CCCeEEE---eC----CCc--ceEEECCCEEEEE
Confidence 6542222 11 122 2366777666644
No 372
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=56.58 E-value=64 Score=24.63 Aligned_cols=47 Identities=6% Similarity=-0.026 Sum_probs=27.4
Q ss_pred cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCC
Q 022590 175 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH 227 (294)
Q Consensus 175 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 227 (294)
++++++....+.|...++..++. ......+......+..+++.|++.
T Consensus 289 g~l~v~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 289 QKLFIGALKDKDVIVMSVNGDKV------TEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp TEEEEEETTTTEEEEEEEETTEE------EEEEEESGGGCCCEEEEEECTTSC
T ss_pred CcEEEEEccCCEEEEEEeCCCeE------eeeEEcccCCCCceeEEEECCCCc
Confidence 66777766778888877764320 001111112234688899999984
No 373
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=54.95 E-value=64 Score=24.15 Aligned_cols=247 Identities=11% Similarity=0.017 Sum_probs=117.7
Q ss_pred CCceEEEEeecCCeEEEEEcCCccccc---------eecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc---CC---
Q 022590 21 DGIPFLVAGGINGIIRVIDVSNEKLHK---------SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV---QT--- 85 (294)
Q Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~---~~--- 85 (294)
+.. ++++.+.+|.|+--.+.+-+..+ .++.. +.+..+.... ..+.|+..+..|.+.-... ..
T Consensus 2 ~e~-~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~-~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 2 QED-VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVAN-THDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCE-EEEEEETTSEEEEEECC---------------------CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCc-EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 344 78899999999877665422211 12222 3333333333 3445666667787554443 22
Q ss_pred ---CceEEEeeccCCCCCceeEEEEec--CCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 86 ---GICILIFAGAGGHRNEVLSVDFHP--SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 86 ---~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
|..+..+-.+ .....|.++..-+ .+..+++..+.+|.++--.+......... ......
T Consensus 79 ~a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~----------------G~~~i~ 141 (307)
T 1zi0_A 79 GARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTA----------------GKVAIK 141 (307)
T ss_dssp SSCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTT----------------CEESSC
T ss_pred CCCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccC----------------CeEEEE
Confidence 2211111111 1334566654421 14556888899999999887763321110 001111
Q ss_pred eecCCCceeecce-e-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 161 ASVHSNYVDCNRW-L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 161 ~~~~~~~i~~~~~-~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
+..+ +.+..+.. + .+.++..+..|.+..++...-..............+. ....+..+....++ ..+++.+..|
T Consensus 142 l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~--~~ll~~T~~G 217 (307)
T 1zi0_A 142 LVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGD--GAILTATQNG 217 (307)
T ss_dssp CCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSS--CEEEEEETTS
T ss_pred ECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCC--CEEEEEEcCC
Confidence 1122 22222222 2 4567777888887777665332111111111111222 23456555544333 4688888999
Q ss_pred eEEEEeccCCCc-----eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 239 KIFVWELQSSPP-----VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 239 ~i~i~d~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
..+-.++..... .-...+......+.+..+....+..-|+..+.+|.+.-.++
T Consensus 218 ~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~ 275 (307)
T 1zi0_A 218 YGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRV 275 (307)
T ss_dssp EEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEG
T ss_pred ceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEec
Confidence 999888754321 01111111122245555544334445556666776655544
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=53.46 E-value=98 Score=25.83 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=38.4
Q ss_pred ceEEEEeCCCCCceEEEeeC------------CCcEEEEEcCCCceEEEeeccCCCCCceeEEEEecCCCceEEee
Q 022590 55 SINEIRTQPLKPSLVVSASK------------DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 118 (294)
Q Consensus 55 ~v~~~~~~~~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~ 118 (294)
....|.|.+ ++.+.+.... ...+..++..+++....+.. .....++.++|+| ++..|+++
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--CCCccccCCEECC-CCCEEEEE
Confidence 456799999 7777663221 12455666667776665542 1345789999999 66656554
No 375
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=51.33 E-value=84 Score=26.76 Aligned_cols=58 Identities=3% Similarity=0.030 Sum_probs=36.4
Q ss_pred ceEEEeeCCCcEE-EEEcCCCc-------eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEE
Q 022590 67 SLVVSASKDESVR-LWNVQTGI-------CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 126 (294)
Q Consensus 67 ~~l~s~~~dg~i~-vwd~~~~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~ 126 (294)
..++.|+.+|.|. +.....+. .+..+... ....+|..|.+++ +...|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~-~~~~pI~~L~ld~-~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELST-KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECS-SSCCCCCEEEEET-TTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec-CCCceeeeEEEcC-CCCEEEEEECCEEEEE
Confidence 3577888999874 33322211 22222222 3567899999999 7778888888776655
No 376
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=50.48 E-value=95 Score=26.44 Aligned_cols=58 Identities=5% Similarity=-0.009 Sum_probs=36.7
Q ss_pred ceEEEeeCCCcEE-EEEcCCCc-eEEEeeccCCCCCceeEEEEecCCC--ceEEeeecCCcEEE
Q 022590 67 SLVVSASKDESVR-LWNVQTGI-CILIFAGAGGHRNEVLSVDFHPSDI--YRIASCGMDNTVKI 126 (294)
Q Consensus 67 ~~l~s~~~dg~i~-vwd~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~--~~l~~~~~dg~i~~ 126 (294)
..++.|+.+|.|. +-....+. .+..+..+ ....+|..|.+++ +. ..|++++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~-~~~~pI~~l~l~~-~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLF-QDFEPVQTLLLSS-KKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECC-TTCCCCCEEEECC-SSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEeccc-CCCCcceeeEecc-CCCccEEEEEEcCeEEEE
Confidence 4678889999874 33443332 22222222 3457899999998 55 77888887766655
No 377
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=49.03 E-value=82 Score=23.64 Aligned_cols=209 Identities=8% Similarity=-0.032 Sum_probs=0.0
Q ss_pred EeCCCCCceEEEeeCCCcEEEEEcCCCceEEEe---------eccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecc
Q 022590 60 RTQPLKPSLVVSASKDESVRLWNVQTGICILIF---------AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 130 (294)
Q Consensus 60 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~---------~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~ 130 (294)
.+-+ +...+++.+.+|.|+--.+..-+....- . -.+.+..+.... ....++..+..|.++-+...
T Consensus 3 dli~-~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk----e~D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~ 76 (312)
T 1suu_A 3 DLMQ-KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN----DGDEIVIALCVN-THDYLFMISNEGKLYLINAY 76 (312)
T ss_dssp ------CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC----TTCCEEEEEEEE-TTCEEEEEETTSEEEEEEGG
T ss_pred cccC-CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC----CCCEEEEEEEEC-CCCEEEEEECCCeEEEEEHH
Q ss_pred ccccccccceeecCCCCCCCCceeeec---eEEeecCCCceeecce----ecceEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 131 EFWTYVEKSFTWTDLPSKFPTKYVQFP---VFIASVHSNYVDCNRW----LGDFILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
. -..........+ ...+.....-+..+.. ...+++..+..|.++.-.+....... ..
T Consensus 77 ~--------------ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r--~~ 140 (312)
T 1suu_A 77 E--------------IKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK--SR 140 (312)
T ss_dssp G--------------SCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------
T ss_pred H--------------CCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC--CC
Q ss_pred ceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC----CCceeeeeccccccCCCeEEEEEccCCCEEEE
Q 022590 204 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS----SPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 279 (294)
Q Consensus 204 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 279 (294)
......+.. ...+..+...... ..++..+.+|.+..++... +....-...-.-.....|.++..-+++..|++
T Consensus 141 G~~~i~L~~-~d~lv~~~~~~~~--~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~ 217 (312)
T 1suu_A 141 GVIVIKLND-KDFVTSAEIVFKD--EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLI 217 (312)
T ss_dssp CEECBCCCT-TCCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEE
T ss_pred cEEEEecCC-CCEEEEEEEeCCC--CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEE
Q ss_pred eccCCcEEEEecCC
Q 022590 280 CCEDGAIWRWDAIP 293 (294)
Q Consensus 280 ~~~dg~i~vw~~~~ 293 (294)
.+..|..+..+++.
T Consensus 218 vt~~G~~kr~~~~e 231 (312)
T 1suu_A 218 VSENGYGKRLNMSK 231 (312)
T ss_dssp EETTSEEEEEEGGG
T ss_pred EECCCceEEEEHHH
No 378
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=48.54 E-value=78 Score=23.25 Aligned_cols=206 Identities=14% Similarity=0.106 Sum_probs=105.0
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
.|..++.. ... .++. . ||.|..|-......+..-..-...|..++... ...+.-. ||.|..|-......+
T Consensus 64 ~i~~ia~G--~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gql 133 (282)
T 3qhy_B 64 GVDAIAAG--NYH--SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQT 133 (282)
T ss_dssp CCCEEEEC--SSE--EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTT
T ss_pred CEEEEEeC--CCE--EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcC
Confidence 55556553 221 3444 4 89999998654322211111234688887765 3333345 899999976543222
Q ss_pred EEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecCCCcee
Q 022590 90 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 169 (294)
Q Consensus 90 ~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 169 (294)
.... .....|..++.-. .+.++ -. ||.+..|-.....+.. .|. .-...|.
T Consensus 134 g~~~---~~~~~i~~i~~G~--~~~~~-l~-~G~v~~wG~n~~gqlg-------------------~p~----~~~~~v~ 183 (282)
T 3qhy_B 134 TVPA---EAQSGVTALDGGV--YTALA-VK-NGGVIAWGDNYFGQTT-------------------VPA----EAQSGVD 183 (282)
T ss_dssp SCCG---GGGSSEEEEEECS--SEEEE-EE-TTEEEEEECCTTSTTS-------------------CCG----GGGSSEE
T ss_pred CCCc---cCCCCeEEEEccc--CEEEE-EE-CCEEEEecCCCCCCCC-------------------Cce----ecCCCeE
Confidence 1111 1234577776642 33333 33 7999999877532211 000 0023344
Q ss_pred ecceecceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCC
Q 022590 170 CNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 249 (294)
Q Consensus 170 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 249 (294)
.++--....+.- .+|.+..|=.....+.... . .....|..++..... .++.. +|.++.|=.+...
T Consensus 184 ~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p--~-------~~~~~v~~i~~G~~h---~~al~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 184 DVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVP--T-------EALSGVSAIASGEWY---SLALK--NGKVIAWGSSRTA 248 (282)
T ss_dssp EEEECSSEEEEE-ETTEEEEEECCTTSTTCCC--G-------GGGSSCCEEEECSSC---EEEEE--TTEEEEESTTCCC
T ss_pred EEEecCCEEEEE-ECCeEEEEECCCCCCCCCC--c-------ccCCCceEEEcCCCE---EEEEE--CCEEEEecCCCCc
Confidence 444433333334 6999999976544322110 0 011235555544332 33333 8999999776654
Q ss_pred ceeeeeccccccCCCeEEEEEccCCCEEE
Q 022590 250 PVLIARLSHAQSKSPIRQTAMSYDGSTIL 278 (294)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 278 (294)
+... ...|.+++-.....+.+
T Consensus 249 q~~v--------~~~v~~iaaG~~h~~al 269 (282)
T 3qhy_B 249 PSSV--------QSGVSSIEAGPNAAYAL 269 (282)
T ss_dssp CGGG--------SSCEEEEEECSSCEEEE
T ss_pred cccC--------CCCcEEEEECcCeEEEE
Confidence 3221 13577777665543333
No 379
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=46.82 E-value=60 Score=26.74 Aligned_cols=69 Identities=12% Similarity=0.099 Sum_probs=42.8
Q ss_pred eeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc----ccceec--ccCcceE-EEEeCCCCCceEEEeeCCCcEEE
Q 022590 10 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK----LHKSFV--GHGDSIN-EIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 10 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~--~h~~~v~-~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
.+++|+.....+-. .++.|+.+|.|.=..+.... .+..+. ....+|. .|.+++ +...|+.++.++.++|
T Consensus 401 ~lT~vav~~~~~~t-V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~-~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYS-VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI-NQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEE-EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECT-TSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeE-EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEcc-CCCeEEEEecccccee
Confidence 46667765433444 78889999987654443221 222222 2246785 899998 7778888877665544
No 380
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=44.95 E-value=1.1e+02 Score=23.97 Aligned_cols=250 Identities=12% Similarity=-0.041 Sum_probs=117.8
Q ss_pred EEEEeecCCeEEEEEcCCc-cc------------cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc--CC-Cce
Q 022590 25 FLVAGGINGIIRVIDVSNE-KL------------HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QT-GIC 88 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~-~~------------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~-~~~ 88 (294)
+.+.-..||.|+.|-.... ++ ...+. ....|..|+... ...+.-..||.|..|-. .. ++.
T Consensus 86 h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~---~hs~al~~~G~v~~wG~~~n~~Gql 161 (423)
T 3mvd_K 86 HNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGD---SHSACLLEDGRVFAWGSFRDSHGNM 161 (423)
T ss_dssp EEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECS---SEEEEEETTSCEEEEECEECSSSEE
T ss_pred eEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCc---CeEEEEeCCCeEEEEeCCCCCCCCc
Confidence 6666678999999965331 10 01111 224566666543 45556678899999975 22 211
Q ss_pred --------EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEE
Q 022590 89 --------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 160 (294)
Q Consensus 89 --------~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
...... .....|..|+. .....+.-..||.|+.|-.....+.-....................|...
T Consensus 162 G~~~~~~~~~p~~~--~~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v 236 (423)
T 3mvd_K 162 GLTIDGNKRTPIDL--MEGTVCCSIAS---GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQL 236 (423)
T ss_dssp ESBTTBCEEEEEES--STTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEE
T ss_pred CcCCCCCCceeeEe--cCCCcEEEEec---CCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEE
Confidence 111111 12345666665 33445556789999999866532211110000000000000001112222
Q ss_pred eecCCCceeecceecceEEEe-eCCCeEEEecCCCCCCCCC--CCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCC
Q 022590 161 ASVHSNYVDCNRWLGDFILSK-SVDNEIVLWEPKMKEQSPG--EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 237 (294)
Q Consensus 161 ~~~~~~~i~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 237 (294)
.......|..++-.....+.. ..++.+..|-.....+... ................|..++... ...++-..+
T Consensus 237 ~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~----~ht~alt~~ 312 (423)
T 3mvd_K 237 IITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ----HHTVILTTD 312 (423)
T ss_dssp CCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECS----SEEEEEETT
T ss_pred eecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEccc----CeEEEEeCC
Confidence 222223444444433333333 6889999997654332211 001111111222234455554432 345555678
Q ss_pred CeEEEEeccCC---------C-ceeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 238 GKIFVWELQSS---------P-PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 238 g~i~i~d~~~~---------~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
|.|+.|=.... . ......+. .-...|..++.... +-+.-..||.|+.|-.
T Consensus 313 G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~--~l~~~v~~ia~G~~--hs~alt~~G~v~~wG~ 372 (423)
T 3mvd_K 313 LKCSVVGRPEYGRLGLGDVKDVVEKPTIVK--KLTEKIVSVGCGEV--CSYAVTIDGKLYSWGS 372 (423)
T ss_dssp CCEEEEECCGGGTTCSSSCCSCEEEEEECT--TCCSCEEEEEEETT--EEEEEETTSCEEEEEC
T ss_pred CcEEEEECCCCCCCCCCCccccccCceEec--cCCCCEEEEEcCCC--eEEEEcCCCCEEEECC
Confidence 99999965321 0 00111111 11125777766543 3444467889998854
No 381
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=43.27 E-value=1.1e+02 Score=23.28 Aligned_cols=238 Identities=7% Similarity=-0.017 Sum_probs=108.6
Q ss_pred EEEEeecCCeEEEEEc---CC------ccccce---ecccCcceEEEE-eCCC-CCceEEEeeCCCcEEEEEcCCCce--
Q 022590 25 FLVAGGINGIIRVIDV---SN------EKLHKS---FVGHGDSINEIR-TQPL-KPSLVVSASKDESVRLWNVQTGIC-- 88 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~---~~------~~~~~~---~~~h~~~v~~~~-~~~~-~~~~l~s~~~dg~i~vwd~~~~~~-- 88 (294)
.|+.-+..|.++-... .. |.++.. +. ....|.++. ..+. +..+++.++.+|.++--.+..-..
T Consensus 55 ~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~ 133 (327)
T 3uc1_A 55 LILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNR 133 (327)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCC
T ss_pred EEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccc
Confidence 5666677787765543 22 222211 22 234455543 3321 467899999999999887654221
Q ss_pred ---EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEecc--ccccccccceeecCCCCCCCCceeeeceEEeec
Q 022590 89 ---ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 163 (294)
Q Consensus 89 ---~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
+..+. +.. .+.+..+.... ....++..+..|.+..+... ......... ...+...+.
T Consensus 134 r~G~~~i~-lke-~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a--------------~Gv~~i~L~- 195 (327)
T 3uc1_A 134 SGGIVAVN-LRD-NDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRAT--------------SGVQGMRFN- 195 (327)
T ss_dssp SSCEESCB-CCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTS--------------BCEESSCCC-
T ss_pred cCceEEEE-ECC-CCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCC--------------CCeeeecCC-
Confidence 11111 112 34555555554 44567777888998888777 421100000 011111111
Q ss_pred CCCceeecce-e-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEE
Q 022590 164 HSNYVDCNRW-L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 241 (294)
Q Consensus 164 ~~~~i~~~~~-~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 241 (294)
....|.++.. . +..++..+..|.++.-.+..-..............+......+..+...... ..++..+.+|.+.
T Consensus 196 ~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~--~~i~l~T~~G~~i 273 (327)
T 3uc1_A 196 IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDD--SELYAVTSGGGVI 273 (327)
T ss_dssp TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTT--CEEEEEEGGGCEE
T ss_pred CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCC--ccEEEEcCCCeEE
Confidence 1223333322 2 5578888999998887665432211100111111122212334444433332 3566667778877
Q ss_pred EEeccCCCce-----eeeeccccccCCCeEEEEEcc-CCCEEEEeccCC
Q 022590 242 VWELQSSPPV-----LIARLSHAQSKSPIRQTAMSY-DGSTILSCCEDG 284 (294)
Q Consensus 242 i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg 284 (294)
-++...-... -...+.. .....|.+++..+ +...+.+.+++|
T Consensus 274 r~~~~~i~~~gR~a~GV~~i~l-~~~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 274 RTAARQVRKAGRQTKGVRLMNL-GEGDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp EEEGGGSCBCCTTSCCEECTTC-CTTCCEEEEEECC-------------
T ss_pred EEehhhccccCCCCCCeEeEec-CCCCEEEEEEEcCCCcceEEEEecCC
Confidence 7876542210 1111111 1234566666554 344566666665
No 382
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=43.25 E-value=1.3e+02 Score=24.28 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=44.0
Q ss_pred CeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCce----eeeeccccccCCCeE-EEEEcc-CCCEEEEeccCCcEEEE
Q 022590 216 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV----LIARLSHAQSKSPIR-QTAMSY-DGSTILSCCEDGAIWRW 289 (294)
Q Consensus 216 ~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~~v~-~~~~s~-~~~~l~s~~~dg~i~vw 289 (294)
.+++++...-.....+..|+.+|.|.---+...... ....+ ....+|. .+.++| ++.+|..++..+.+++.
T Consensus 341 ~LTsVav~vv~~~TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei---~ee~~V~~~L~ldp~~~~~LyV~s~~~V~qVP 417 (476)
T 3nvn_B 341 DLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEI---KEETPVFYKLVPDPVKNIYIYLTAGKEVRRIR 417 (476)
T ss_dssp SEEEEEEEESSSSEEEEEEETTSEEEEEECCTTSCCCCCEEEEEC---TTCCCBCSCCEECSSCTTEEEEEETTEEEEEE
T ss_pred CCceEEEEEeCCeEEEEEECCCceEEEEEecCCCCccceeEEEee---cCCCccccccccCccccceEEEecCcEEEEEE
Confidence 466666666666678888999999875443322111 11112 2234565 678888 57788888888766653
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=41.03 E-value=1.1e+02 Score=24.90 Aligned_cols=70 Identities=19% Similarity=0.223 Sum_probs=42.2
Q ss_pred eeEEEEEeec--CCCc-eEEEEeecCCeEE-EEEcCCcc-------ccceecc--cCcceEEEEeCCCCCceEEEeeCCC
Q 022590 10 SFYTVSWACN--VDGI-PFLVAGGINGIIR-VIDVSNEK-------LHKSFVG--HGDSINEIRTQPLKPSLVVSASKDE 76 (294)
Q Consensus 10 ~v~~~~~~~~--~~~~-~~l~~~~~dg~i~-iw~~~~~~-------~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg 76 (294)
..++|+...- +++. ..+..|+.+|.|. +.....+. .+..+.. ...+|..|.+++ +...|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-KQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET-TTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC-CCCEEEEEECCe
Confidence 4566666532 1222 2678889999874 33222211 2223332 357899999999 778888888877
Q ss_pred cEEE
Q 022590 77 SVRL 80 (294)
Q Consensus 77 ~i~v 80 (294)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 384
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=40.83 E-value=62 Score=26.53 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCc--eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEE
Q 022590 215 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 288 (294)
Q Consensus 215 ~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~v 288 (294)
..++.++..+.+.+..+..|+.+|.|.-.-+..... .....+.......+|. ..++.++++|..++.++.++|
T Consensus 405 ~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~-~~l~~~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 405 VQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQ-RDVSRLGDHLLFASGDQVFQV 479 (527)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBC-SCCEEETTEEEEEETTEEEEE
T ss_pred eEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceee-hhcccCCCEEEEEECCEEEEE
Confidence 347788888877777899999999987665543221 1111122112334553 234455668888888876654
No 385
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=40.58 E-value=1.3e+02 Score=23.39 Aligned_cols=110 Identities=16% Similarity=0.061 Sum_probs=62.4
Q ss_pred CCCceEEEEeecCCeEEEEEcCCcc---------ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEE---cCC--
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEK---------LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN---VQT-- 85 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd---~~~-- 85 (294)
|+.. ++++.+.+|.|+=-.+.+-+ ....++ ..+.+..+.... ....|+..+..|.+.-+. +..
T Consensus 5 ~~e~-~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 5 APED-VVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCC-EEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cCCC-EEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 5566 89999999999976653311 112223 244555555554 445566666677765443 322
Q ss_pred ----CceEEEeeccCCCCCceeEEEEec--CCCceEEeeecCCcEEEEeccccc
Q 022590 86 ----GICILIFAGAGGHRNEVLSVDFHP--SDIYRIASCGMDNTVKIWSMKEFW 133 (294)
Q Consensus 86 ----~~~~~~~~~~~~~~~~v~~l~~~~--~~~~~l~~~~~dg~i~~wd~~~~~ 133 (294)
|..+..+-.+ .....|.++...+ ....+|+.++..|.++--.+....
T Consensus 82 r~a~G~~i~~ll~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~ 134 (370)
T 3l6v_A 82 SNARGRPIINWIPL-ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFA 134 (370)
T ss_dssp TTSCCEEGGGSCCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGC
T ss_pred cccCCcCHhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhh
Confidence 2221111111 1344566654432 134578999999999999887743
No 386
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=37.06 E-value=1.4e+02 Score=23.03 Aligned_cols=244 Identities=11% Similarity=0.123 Sum_probs=118.2
Q ss_pred EEEEeecCCeEEEEEcCCccc-----------cceecc-cCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCc-----
Q 022590 25 FLVAGGINGIIRVIDVSNEKL-----------HKSFVG-HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGI----- 87 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~-----------~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~----- 87 (294)
..+.-..||.|..|-....-. ...+.. ....+..++.+. .....+.-..||.|..|-.....
T Consensus 64 ~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 64 TLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp EEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred eEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 566667889999996432111 011111 122345566666 56677777889999999643210
Q ss_pred ------eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 88 ------CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 88 ------~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
....+..+ ....|..++. .....+.-..||.|..|-.....+.-... ......|....
T Consensus 143 ~~~~~~~p~~v~~l--~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~-----------~~~~~~p~~v~ 206 (389)
T 3kci_A 143 NRSPCDRPRVIESL--RGIEVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSD-----------SEDQLKPKLVE 206 (389)
T ss_dssp SCCCEEEEEECGGG--TTSCEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSS-----------CCCEEEEEECG
T ss_pred CCccCcCCeEeccc--CCCeEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCC-----------CcccccceEec
Confidence 11111111 1225666665 34445566779999999876532211100 00001111111
Q ss_pred ecCCCceeeccee--cceEEEeeCCCeEEEecCCCCCCCCCCCC--ceeeeeeec-CCCCeeEEEEcccCCcceEEEEcC
Q 022590 162 SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGT--ADILQKYPV-PECDIWFIKFSCDFHYNAAAIGNR 236 (294)
Q Consensus 162 ~~~~~~i~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~ 236 (294)
......|..++.- ....+....+|.|..|-.....+...... ......... ....+..++... ...++-..
T Consensus 207 ~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~----~hs~alt~ 282 (389)
T 3kci_A 207 ALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS----QFSVALTK 282 (389)
T ss_dssp GGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET----TEEEEEET
T ss_pred ccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC----CEEEEEeC
Confidence 1122334444432 24666667899999996554322111100 011111111 122344444432 24445578
Q ss_pred CCeEEEEeccCCC--------cee-eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEecC
Q 022590 237 EGKIFVWELQSSP--------PVL-IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 292 (294)
Q Consensus 237 dg~i~i~d~~~~~--------~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 292 (294)
+|.|+.|=..... ... ...+. ......|..++... .+.+.-..||.|+.|-..
T Consensus 283 ~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~-~l~~~~v~~ia~G~--~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 283 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ-GLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp TSCEEEEECCGGGTTCSSSCCCEEEEEECG-GGTTCCEEEEEECS--SEEEEEETTCCEEEEECC
T ss_pred CCeEEEEeCCCCCCCCCCCCccccCCeEec-cCCCCCEEEEEecc--CeEEEECCCCCEEEeeCC
Confidence 8999999654311 011 11111 11123466665543 345555688899988543
No 387
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=36.34 E-value=2.1e+02 Score=24.77 Aligned_cols=113 Identities=8% Similarity=-0.081 Sum_probs=56.5
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccceecc------------cCcceEEEEeCCCCCceEEEeeC
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG------------HGDSINEIRTQPLKPSLVVSASK 74 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~~~l~s~~~ 74 (294)
-.+.|.+|++. |.+...+.++...|.|...+ +.++.-..+.. ....|.+|++.|.+.+.++.+..
T Consensus 19 ~~g~i~~i~~~--p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g 95 (763)
T 3a0f_A 19 GGGFISGLVAH--PTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQG 95 (763)
T ss_dssp BCSCEEEEEEC--SSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEEC
T ss_pred CCCceeEEEeC--CCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEec
Confidence 35688999987 55433566666666554443 22321111111 22458999999855555554432
Q ss_pred C-----CcEEEEE-cCCCceEEEeeccCCC----CCc--eeEEEEecCCCceEEeeecCC
Q 022590 75 D-----ESVRLWN-VQTGICILIFAGAGGH----RNE--VLSVDFHPSDIYRIASCGMDN 122 (294)
Q Consensus 75 d-----g~i~vwd-~~~~~~~~~~~~~~~~----~~~--v~~l~~~~~~~~~l~~~~~dg 122 (294)
+ ....||. .+.|+.-..+...... .+. ...|+++|.+...+..+..++
T Consensus 96 ~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~ 155 (763)
T 3a0f_A 96 DYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQ 155 (763)
T ss_dssp SCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSS
T ss_pred ccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCC
Confidence 1 1133443 3444443333211000 111 146888886556666665543
No 388
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=36.27 E-value=1.5e+02 Score=22.99 Aligned_cols=161 Identities=7% Similarity=-0.047 Sum_probs=83.4
Q ss_pred eCCCCCceEEEeeCCCcEEEEEcCC---------CceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccc
Q 022590 61 TQPLKPSLVVSASKDESVRLWNVQT---------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 131 (294)
Q Consensus 61 ~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~ 131 (294)
+-| +..++++.+.+|.|+=-.+.. +.....++ ....+..+.... ....++..+..|.+.-+....
T Consensus 3 lI~-~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk----e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~e 76 (370)
T 3l6v_A 3 LIA-PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK----EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQ 76 (370)
T ss_dssp CCC-CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS----CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGG
T ss_pred ccc-CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC----CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHH
Confidence 345 667899999999999765421 12222232 445566666554 445566667778776665543
Q ss_pred cccccccceeecCCCCCCCCceeeece---EEeecCCCceeecc-e---e-cceEEEeeCCCeEEEecCCCCCCCCCCCC
Q 022590 132 FWTYVEKSFTWTDLPSKFPTKYVQFPV---FIASVHSNYVDCNR-W---L-GDFILSKSVDNEIVLWEPKMKEQSPGEGT 203 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~-~---~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 203 (294)
........ ...++ ..+. ....|.++. . . +.+++.++..|.++.-.+........ .
T Consensus 77 ip~~~r~a--------------~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~--~ 139 (370)
T 3l6v_A 77 LPEAGSNA--------------RGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA--R 139 (370)
T ss_dssp SCBCCTTS--------------CCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT--T
T ss_pred CcCCCccc--------------CCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC--C
Confidence 11100000 00000 0111 122233222 1 2 45899999999999887654432111 1
Q ss_pred ceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccC
Q 022590 204 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 247 (294)
Q Consensus 204 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 247 (294)
......+.. ...+..+...... ..++..+.+|.+..++...
T Consensus 140 G~~ai~L~~-~d~lv~v~~~~~~--~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 140 GKIAINLDE-GDALVGVALTDGD--RDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CEESSCCCT-TCCEEEEEEECSC--CEEEEEETTSEEEEEEGGG
T ss_pred ceEEEEeCC-CCEEEEEEEeCCC--ceEEEEeCCCeEEEEEccc
Confidence 111112222 3344444444333 3577777888888887654
No 389
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=33.33 E-value=1.7e+02 Score=22.85 Aligned_cols=237 Identities=9% Similarity=-0.082 Sum_probs=112.3
Q ss_pred EEEeecCCeEEEEEcCCc-cc-----------cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCce-----
Q 022590 26 LVAGGINGIIRVIDVSNE-KL-----------HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC----- 88 (294)
Q Consensus 26 l~~~~~dg~i~iw~~~~~-~~-----------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----- 88 (294)
.+.-..||.|..|-.... ++ ...+. .-..|..|+.. ....+.-..||.|..|-......
T Consensus 36 ~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~v~~va~G---~~h~~~l~~~G~v~~wG~n~~GqLG~~~ 111 (423)
T 3mvd_K 36 PKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVA-GIPDAVDISAG---GMHNLVLTKSGDIYSFGCNDEGALGRDT 111 (423)
T ss_dssp CCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECC-SCSSEEEEEEC---SSEEEEEETTSCEEEEECCSSSTTCSCC
T ss_pred ceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEcc-CCCCceEEeeC---CCeEEEEeCCCeEEEeECCCCcCCCCCC
Confidence 344456788888854321 10 11111 11346666653 45666677899999996532111
Q ss_pred --------EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEec--cccccccccceeecCCCCCCCCceeeece
Q 022590 89 --------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSKFPTKYVQFPV 158 (294)
Q Consensus 89 --------~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (294)
...+. ....|..++. .....+.-..||.|+.|-. ......-... ......|+
T Consensus 112 ~~~~~~~~P~~v~----~~~~i~~va~---G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~-----------~~~~~~p~ 173 (423)
T 3mvd_K 112 SEDGSESKPDLID----LPGKALCISA---GDSHSACLLEDGRVFAWGSFRDSHGNMGLTI-----------DGNKRTPI 173 (423)
T ss_dssp CSTTSSSSCEECC----CSSCEEEEEE---CSSEEEEEETTSCEEEEECEECSSSEEESBT-----------TBCEEEEE
T ss_pred cCCccccCCeEEc----CCCCEEEEEc---CcCeEEEEeCCCeEEEEeCCCCCCCCcCcCC-----------CCCCceee
Confidence 11111 2235666655 3344555678999999986 3211100000 00001111
Q ss_pred EEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCC--------------CCceeeeeeecCCCCeeEEEEcc
Q 022590 159 FIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGE--------------GTADILQKYPVPECDIWFIKFSC 224 (294)
Q Consensus 159 ~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~~~~~ 224 (294)
. ......|..++.-....+.-..+|.|..|-.....+.... ....+..........+..++...
T Consensus 174 ~--~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~ 251 (423)
T 3mvd_K 174 D--LMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATN 251 (423)
T ss_dssp E--SSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEET
T ss_pred E--ecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECC
Confidence 1 1123346666655666777788999999965432211100 00011111111223445444432
Q ss_pred cCCcceEEEEcCCCeEEEEeccCCCcee-------eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 225 DFHYNAAAIGNREGKIFVWELQSSPPVL-------IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 225 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
. ..++.-..+|.|+.|-.+.....- ....+.......|..++... .+.+.-..||.|+.|-.
T Consensus 252 ~---~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~--~ht~alt~~G~v~~wG~ 320 (423)
T 3mvd_K 252 Y---CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ--HHTVILTTDLKCSVVGR 320 (423)
T ss_dssp T---EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECS--SEEEEEETTCCEEEEEC
T ss_pred c---EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEccc--CeEEEEeCCCcEEEEEC
Confidence 2 234444688999999765421100 00000001123566665433 34455567888888853
No 390
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=33.01 E-value=2.1e+02 Score=23.62 Aligned_cols=70 Identities=7% Similarity=0.123 Sum_probs=43.9
Q ss_pred ceeEEEEEeecCCCceEEEEeecCCeEEEEEcC-Cc--cccceec-ccCcce-EEEEeCCCCCceEEEeeCCCcEEE
Q 022590 9 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS-NE--KLHKSFV-GHGDSI-NEIRTQPLKPSLVVSASKDESVRL 80 (294)
Q Consensus 9 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~--~~~~~~~-~h~~~v-~~~~~~~~~~~~l~s~~~dg~i~v 80 (294)
...++|+..... |-..+..|+.+|.|.=.-+. ++ ..+..+. ....+| ..|.+++ +...|+.++.++.++|
T Consensus 387 ~~lT~IaVd~~~-g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~-~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 387 IQLTAVAVTMED-GHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDG-TFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CCEEEEEEEEET-TEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECT-TSSEEEEECSSCEEEE
T ss_pred CceEEEEEEeec-CeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEec-CCCEEEEEeCCEEEEE
Confidence 357777776543 44478889999998643332 21 1222222 234577 4888988 7778888888776665
No 391
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=32.52 E-value=1.5e+02 Score=21.78 Aligned_cols=208 Identities=11% Similarity=0.021 Sum_probs=103.9
Q ss_pred cceEEEEeCCCCCceEEEeeCCCcEEE---EEcCCCceEEEeeccCCCCCceeEEEEecC-CCceEEeeecCCcEEEEec
Q 022590 54 DSINEIRTQPLKPSLVVSASKDESVRL---WNVQTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSM 129 (294)
Q Consensus 54 ~~v~~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~~l~~~~~dg~i~~wd~ 129 (294)
+.+..+.-.. ..+.|+.-+..|.+.- +++..+.... + + .....|..+.. +. +...++..+.+|.++-..+
T Consensus 24 D~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l--l-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l 97 (276)
T 3no0_A 24 APVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKVS-L--K-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPL 97 (276)
T ss_dssp CCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEECC-C--S-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEG
T ss_pred CeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCcccc-c--C-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEH
Confidence 4555554444 3345666667787654 3333222111 2 1 24556766644 32 3567889999999999988
Q ss_pred cccccccccceeecCCCCCCCCceeeeceEEeecCCCceeecce--ecceEEEeeCCCeEEEecCCCCCCCCCCCCceee
Q 022590 130 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADIL 207 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 207 (294)
.... .... ......+.. .+.+..+.. ..+.++..+..|.+..++...-............
T Consensus 98 ~~~~-~~~~----------------G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~ 159 (276)
T 3no0_A 98 AEFE-YKAQ----------------GMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQG 159 (276)
T ss_dssp GGTT-TCST----------------TEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC
T ss_pred HHhh-hhcC----------------CeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEE
Confidence 7643 1100 000001111 112222111 1456777788888777665432211100011111
Q ss_pred eeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEEEeccCCCce-----eeeeccccccCCCeEEEEEccCCCEEEEecc
Q 022590 208 QKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV-----LIARLSHAQSKSPIRQTAMSYDGSTILSCCE 282 (294)
Q Consensus 208 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 282 (294)
..+.. ...+..+...++. ..++..+..|.++...+...... -...+ .....+..+....+...++..+.
T Consensus 160 i~L~~-~d~vv~~~~~~~~--~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~~~~~~~i~~~t~ 233 (276)
T 3no0_A 160 IKLEK-NDETSGLRIWNGE--PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIPIKEEVELLITTK 233 (276)
T ss_dssp CCCCT-TCCEEEEEEESSC--SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEEESSEEEEEEEET
T ss_pred EccCC-CCEEEEEEEeCCC--CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEEeCCCCEEEEEcC
Confidence 12222 3445555444443 47888889999999887543211 11111 12234555444334445666677
Q ss_pred CCcEEE--Eec
Q 022590 283 DGAIWR--WDA 291 (294)
Q Consensus 283 dg~i~v--w~~ 291 (294)
+|.+.. ++.
T Consensus 234 ~G~~ir~~~~~ 244 (276)
T 3no0_A 234 NGKAFYDKINQ 244 (276)
T ss_dssp TSCEEEEEEEG
T ss_pred CCeEEEeeeCH
Confidence 787766 654
No 392
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=31.35 E-value=2.3e+02 Score=23.73 Aligned_cols=58 Identities=2% Similarity=0.005 Sum_probs=35.9
Q ss_pred ceEEEeeCCCcEEEEEc-CCC----c-eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEE
Q 022590 67 SLVVSASKDESVRLWNV-QTG----I-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 126 (294)
Q Consensus 67 ~~l~s~~~dg~i~vwd~-~~~----~-~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~ 126 (294)
..++.|+.+|.|.-.-. ..+ . .+..+..+ ....+|..|.+++ +...|++++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~-~~~~pi~~L~ls~-~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPF-RRAAAIQTMSLDA-ERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCC-SSCCCCCEEEEET-TTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeecc-CCCCceeeEEEcC-CCCEEEEEecceEEEc
Confidence 46778888998754333 222 1 12223211 2456899999998 7777888887766555
No 393
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=26.21 E-value=2.9e+02 Score=23.19 Aligned_cols=118 Identities=9% Similarity=0.169 Sum_probs=56.3
Q ss_pred ceecceEEEeeC-----CCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEc----CCCeEEE
Q 022590 172 RWLGDFILSKSV-----DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN----REGKIFV 242 (294)
Q Consensus 172 ~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~----~dg~i~i 242 (294)
.++++.++.|.- .|.+.+|+..................-..-...+....|.-++. .-+++|. ..|.+.+
T Consensus 172 ~~~~d~~v~GApG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~-~DlvvGAP~~~~~G~V~v 250 (597)
T 3v4v_A 172 FYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHT-TEVVGGAPQHEQIGKAYI 250 (597)
T ss_dssp EECSSEEEEEETTHHHHTBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTS-CEEEEEETTGGGTCEEEE
T ss_pred EecCCceEEccccccccccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCC-eEEEEecccccCCceEEE
Confidence 344566666654 47899998765432110000000000001122344344555664 3455553 3589999
Q ss_pred EeccCCCceeeeeccccc----cCCCeEEEEEccCCC-EEEEec-------cCCcEEEEe
Q 022590 243 WELQSSPPVLIARLSHAQ----SKSPIRQTAMSYDGS-TILSCC-------EDGAIWRWD 290 (294)
Q Consensus 243 ~d~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~-~l~s~~-------~dg~i~vw~ 290 (294)
|....+.......+.... ....+....++-||. -|++|. ..|.++||-
T Consensus 251 ~~~~~~~~~~~~~l~G~~~g~~fG~sva~~D~ngDG~~DlvVGap~~~~~~~~G~v~vy~ 310 (597)
T 3v4v_A 251 FSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYI 310 (597)
T ss_dssp EEECSSSEEEEEEEECSSTTCCTTSEEEEECTTCSSSCEEEEEETTCCSSSCCCEEEEEE
T ss_pred EecCCCceeEEEEecccccCCCCcceEEEEeeCCCCCceEEEEcccccCCCcCCeEEEEE
Confidence 987655433333322111 112344444666663 345543 458888874
No 394
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.68 E-value=2.4e+02 Score=21.75 Aligned_cols=245 Identities=8% Similarity=-0.002 Sum_probs=112.3
Q ss_pred EEEEeecCCeEEEEEcCCccccc-----------eecc-cCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCC------
Q 022590 25 FLVAGGINGIIRVIDVSNEKLHK-----------SFVG-HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG------ 86 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~-----------~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~------ 86 (294)
.++.-..||.|..|=....-.+- .+.. ....|..++. .....+.-..||.|..|-....
T Consensus 12 ~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~---G~~~~~~l~~~G~v~~wG~n~~GqLG~g 88 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGKLYATGYGAGGRLGIG 88 (389)
T ss_dssp ---------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE---ETTEEEEEETTSCEEEEECCGGGTTSSS
T ss_pred cceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe---CCCeEEEEcCCCcEEEEECCCCCCCCCC
Confidence 56666778888888654321111 0000 0123445544 3355666678899999964321
Q ss_pred --c---eEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEe
Q 022590 87 --I---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 161 (294)
Q Consensus 87 --~---~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
+ ....+.. .....+..++.+. .....+.-..||.|..|-.....+.-... ......|....
T Consensus 89 ~~~~~~~p~~v~~--~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g~-----------~~~~~~p~~v~ 154 (389)
T 3kci_A 89 GTESVSTPTLLES--IQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHGN-----------RSPCDRPRVIE 154 (389)
T ss_dssp SSCCEEEEEECGG--GTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSSS-----------CCCEEEEEECG
T ss_pred CcCCccCCEEccc--ccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCCC-----------CccCcCCeEec
Confidence 1 1111111 1223455566665 55666667889999999876532211100 00011111111
Q ss_pred ecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCcee--eeeee-cCCCCeeEEEEcccCCcceEEEEcCCC
Q 022590 162 SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADI--LQKYP-VPECDIWFIKFSCDFHYNAAAIGNREG 238 (294)
Q Consensus 162 ~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~l~~~~~dg 238 (294)
......|..++--....+....+|.|..|-.....+......... ..... .....+..++..... ...++-..+|
T Consensus 155 ~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~--~~t~~l~~~G 232 (389)
T 3kci_A 155 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGD--AQTLCLTDDD 232 (389)
T ss_dssp GGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSS--CEEEEEETTT
T ss_pred ccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCC--cEEEEEccCC
Confidence 112234555555566667778899999997654222111101111 11111 122345555544322 3556667889
Q ss_pred eEEEEeccCCC--------c-eeeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 239 KIFVWELQSSP--------P-VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 239 ~i~i~d~~~~~--------~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
.|+.|=..... . .....+. ......|..++.... +.+.-..||.|+.|-.
T Consensus 233 ~v~~wG~n~~GqLG~g~~~~~~~p~~v~-~~~~~~v~~v~~G~~--hs~alt~~G~v~~wG~ 291 (389)
T 3kci_A 233 TVWSWGDGDYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQ--FSVALTKSGAVYTWGK 291 (389)
T ss_dssp EEEEEECCGGGTTSSSSCCCEEEEEECG-GGTTSCEEEEEEETT--EEEEEETTSCEEEEEC
T ss_pred EEEEEeCCCCCCCCCCCCCCccccEEec-ccCCCcEEEEeCCCC--EEEEEeCCCeEEEEeC
Confidence 99999654311 0 0111111 111224666655433 4444467888888854
No 395
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=24.57 E-value=1.2e+02 Score=18.11 Aligned_cols=30 Identities=20% Similarity=0.475 Sum_probs=20.5
Q ss_pred CcEEEEEcCCCceEEEeeccCCCCCceeEE
Q 022590 76 ESVRLWNVQTGICILIFAGAGGHRNEVLSV 105 (294)
Q Consensus 76 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l 105 (294)
-.|.|||+.+|....++.......+.+-|+
T Consensus 18 E~V~IvNvnNG~Rf~TYvI~GerGSG~I~l 47 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYALPGERGSGVIGI 47 (96)
T ss_dssp CEEEEEETTTCCEEEEECEEECTTTTCEEE
T ss_pred CEEEEEECCCCceEEEEEEEccCCCCeEEE
Confidence 468999999999888776543333445444
No 396
>3enb_A PRE-mRNA-processing-splicing factor 8; PRP8 domain IV, beta finger, RNAse H, spliceosome, U5-220K, mutation, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: c.55.3.14 PDB: 3lru_A
Probab=23.19 E-value=1.2e+02 Score=21.04 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=30.5
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCccccc
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK 47 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 47 (294)
+..||.+.......|+ +++-.-+|.|.+++..+|+..-
T Consensus 14 DtnvYrvt~h~T~eGn--~~tkpiNG~ifIfnP~TGqLfl 51 (222)
T 3enb_A 14 DTNVYRVTIHKTFEGN--LTTKPINGAIFIFNPRTGQLFL 51 (222)
T ss_dssp CTTSSEEEEEECTTSC--EEEEEECEEEEEECTTTCEEEE
T ss_pred CCcEEEEEEEeccCCC--ceeecccceEEEEeCCCCcEEE
Confidence 4567888888778887 8888889999999998887543
No 397
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.19 E-value=1.5e+02 Score=20.33 Aligned_cols=36 Identities=6% Similarity=0.031 Sum_probs=25.5
Q ss_pred cCceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCcc
Q 022590 7 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK 44 (294)
Q Consensus 7 h~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 44 (294)
+..-+.++.|. ..+..-+++...+|++.++|..-|+
T Consensus 117 g~~hllsl~f~--~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 117 GRKHLLSLRFA--NVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TCEEEEEEEET--TTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CCceEEEEEec--CCCceeEEeccCCCeEEEeCCCCce
Confidence 34445556664 5555578888899999999987664
No 398
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.62 E-value=2.7e+02 Score=21.63 Aligned_cols=255 Identities=13% Similarity=0.089 Sum_probs=120.1
Q ss_pred CceeEEEEEeecCCCceEEEEeecCCeEEEEEcCCc-cc----------cceecc-cCcceEEEEeCCCCCceEEEeeCC
Q 022590 8 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-KL----------HKSFVG-HGDSINEIRTQPLKPSLVVSASKD 75 (294)
Q Consensus 8 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~----------~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d 75 (294)
..+|..++.. +. +.++-..||.|..|-.... ++ ...+.. ....|..++... .+.+.-..|
T Consensus 15 ~~~v~~ia~G----~~-hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~---~ht~al~~~ 86 (406)
T 4d9s_A 15 PRKVLIISAG----AS-HSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA---DHTVAYSQS 86 (406)
T ss_dssp CCCEEEEEEC----SS-EEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETT
T ss_pred ccceEEEecC----CC-eEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCc---ceEEEEECC
Confidence 3456565542 22 5666677899999965331 10 111111 123567776643 333333444
Q ss_pred -CcEEEEEcCCC---------ceEEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCC
Q 022590 76 -ESVRLWNVQTG---------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 145 (294)
Q Consensus 76 -g~i~vwd~~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 145 (294)
+.|..|-.... ..........-....|..|+. .....+.-..||.|+.|-.....+.-...
T Consensus 87 gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~---G~~h~~alt~~G~v~~wG~n~~GqLG~g~------ 157 (406)
T 4d9s_A 87 GMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC---GDSHCLAVTMEGEVQSWGRNQNGQLGLGD------ 157 (406)
T ss_dssp TTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSSS------
T ss_pred CCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE---ChhheEEEcCCCcEEEeCCCCCccCCCCC------
Confidence 58988854321 111111100012235666665 33445556789999999866522111100
Q ss_pred CCCCCCceeeeceEEeecCCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCcee--eeeee-cCCCCeeEEEE
Q 022590 146 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADI--LQKYP-VPECDIWFIKF 222 (294)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~-~~~~~i~~~~~ 222 (294)
......|..........|..++-.....+.-..+|.+..|-.....+......... ..... .....+..++.
T Consensus 158 -----~~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~ 232 (406)
T 4d9s_A 158 -----TEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC 232 (406)
T ss_dssp -----CCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE
T ss_pred -----CCCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE
Confidence 00001111111112234555555566677778899999996554322111111111 11111 11234444443
Q ss_pred cccCCcceEEEEcCCCeEEEEeccCCCc--------ee-eeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 223 SCDFHYNAAAIGNREGKIFVWELQSSPP--------VL-IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 223 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
.. ...++-..+|.|+.|=...... .. ...+. ......|..++... .+.+.-..||.|+.|-.
T Consensus 233 G~----~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~-~~~~~~v~~i~~G~--~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 233 GW----RHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGW--RHTMALTSDGKLYGWGW 303 (406)
T ss_dssp CS----SEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECG-GGTTSCEEEEEECS--SEEEEEETTSCEEEEEC
T ss_pred CC----CcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEec-ccCCCCEEEEEecC--CEEEEEcCCCeEEEeeC
Confidence 32 2455556789999997543211 00 11111 11123465555433 34444557888888853
No 399
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.52 E-value=98 Score=21.16 Aligned_cols=38 Identities=8% Similarity=0.177 Sum_probs=28.1
Q ss_pred cCcceEEEEeCCCCCceEEEeeCCCcEEEEEcCCCceE
Q 022590 52 HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 89 (294)
Q Consensus 52 h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 89 (294)
+...+.++.|......-+++...+|++.++|.+-|+-.
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 45667778888744456777778999999999877643
No 400
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=22.09 E-value=1.4e+02 Score=18.34 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=32.4
Q ss_pred cccCcceEEEEeCCCCCceEE------Ee--eCCCcEEEEEcCCCceEEEeeccCCCCCceeEE
Q 022590 50 VGHGDSINEIRTQPLKPSLVV------SA--SKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 105 (294)
Q Consensus 50 ~~h~~~v~~~~~~~~~~~~l~------s~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~l 105 (294)
+-|...|+....+- .|..-+ .+ -..-.|.|||+.+|....++.......+.+-|+
T Consensus 12 KIHratVT~a~L~Y-~GSitID~~Ll~aA~i~~~E~V~I~NvnNG~Rf~TYvI~GerGSg~I~l 74 (114)
T 3oug_A 12 KISYATVTGKDLFY-VGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVIKGEPNSKTIAL 74 (114)
T ss_dssp EEEEEECCEEESSC-C-CEEEEHHHHHHTTCCTTBEEEEEETTTCCEEEEEEEEECTTSCCEEE
T ss_pred hhcceEEecccccc-cceEEECHHHHHHcCCCcCCEEEEEECCCCceEEEEEEEccCCCCEEEe
Confidence 34777777777665 443211 11 123469999999999887776543343445444
No 401
>1c3k_A Agglutinin; beta prism, jacalin-related, mannose, sugar BIND protein; 2.00A {Helianthus tuberosus} SCOP: b.77.3.1 PDB: 1c3m_A* 1c3n_A*
Probab=21.98 E-value=1.7e+02 Score=18.93 Aligned_cols=71 Identities=11% Similarity=0.105 Sum_probs=37.9
Q ss_pred cCceeEEEEEee-cCCCceEEE---EeecCCeEEEEEcCCccccceecccC------cceEEEEeCCCCCceEEEeeCCC
Q 022590 7 KEESFYTVSWAC-NVDGIPFLV---AGGINGIIRVIDVSNEKLHKSFVGHG------DSINEIRTQPLKPSLVVSASKDE 76 (294)
Q Consensus 7 h~~~v~~~~~~~-~~~~~~~l~---~~~~dg~i~iw~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~l~s~~~dg 76 (294)
+...|.+|.|.+ ..+|+ ... -|...|...-+.++.++.+..+.+.. ..|++|.|.-+.+.+...|...|
T Consensus 37 ~g~~I~~i~f~Y~d~~G~-~~~~~~~G~~gg~~~~~~L~p~E~it~vsg~~g~~~g~~~I~sL~f~Tn~~~~~~fG~~~g 115 (147)
T 1c3k_A 37 GGTCIFSIQFVYKDKDNI-EYHSGKFGVLGDKAETITFAEDEDITAISGTFGAYYHMTVVTSLTFQTNKKVYGPFGTVAS 115 (147)
T ss_dssp ESSSEEEEEEEEECTTCC-EEEEEEESCCCCCCEEEECCTTCCEEEEEEEEEESSSSEEEEEEEEEESSCEEEEEECCCS
T ss_pred eCCEEEEEEEEEECCCCC-EEECcccCCCCCceEEEEeCCCCcEEEEEEEEcccCCccEEEEEEEEECCCceeCCcCCCC
Confidence 345677777776 45665 332 23344444555555555555554432 24777777653444444454445
Q ss_pred cE
Q 022590 77 SV 78 (294)
Q Consensus 77 ~i 78 (294)
+-
T Consensus 116 ~~ 117 (147)
T 1c3k_A 116 SS 117 (147)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 402
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=21.68 E-value=1.3e+02 Score=18.12 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=20.6
Q ss_pred CcEEEEEcCCCceEEEeeccCCCCCceeEE
Q 022590 76 ESVRLWNVQTGICILIFAGAGGHRNEVLSV 105 (294)
Q Consensus 76 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l 105 (294)
-.|.|||+.+|....++..... .+.+-|+
T Consensus 18 E~V~I~NvnNG~Rf~TYvI~Ge-GSG~I~l 46 (102)
T 3plx_B 18 EKVQVVNVNNGARFETYTIATQ-EEGVVCL 46 (102)
T ss_dssp CEEEEEETTTCCEEEEECEEES-STTCEEE
T ss_pred CEEEEEECCCCcEEEEEEEEcC-CCCEEEe
Confidence 4689999999998887765444 4555444
No 403
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.43 E-value=1.3e+02 Score=17.90 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=20.0
Q ss_pred CcEEEEEcCCCceEEEeeccCCCCCceeEE
Q 022590 76 ESVRLWNVQTGICILIFAGAGGHRNEVLSV 105 (294)
Q Consensus 76 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~l 105 (294)
-.|.|||+.+|....++...... +.+-|+
T Consensus 17 E~V~IvNvnNG~RfeTYvI~Ger-SG~I~l 45 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYVILGKK-RGEICV 45 (97)
T ss_dssp CEEEEEETTTCCEEEEECEEECS-TTCEEE
T ss_pred CEEEEEECCCCceEEEEEEeecc-CCeEEE
Confidence 46899999999988877653333 445444
No 404
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.42 E-value=3.9e+02 Score=23.00 Aligned_cols=68 Identities=15% Similarity=0.258 Sum_probs=38.9
Q ss_pred ecCCCceEEEEeecCC----eEEEEEcCCccccce-ec-ccCc------ceEEEEeCCCCCceEEEe----------eCC
Q 022590 18 CNVDGIPFLVAGGING----IIRVIDVSNEKLHKS-FV-GHGD------SINEIRTQPLKPSLVVSA----------SKD 75 (294)
Q Consensus 18 ~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~-~~-~h~~------~v~~~~~~~~~~~~l~s~----------~~d 75 (294)
++|+++..+++-|..| .++++|+.+++.+.. +. .-.. ....++|.. +..++++. +..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCCCcCcCCCC
Confidence 5699995555544444 699999999876642 22 0000 113447764 44555542 122
Q ss_pred CcEEEEEcCCC
Q 022590 76 ESVRLWNVQTG 86 (294)
Q Consensus 76 g~i~vwd~~~~ 86 (294)
..|+.|.+.+.
T Consensus 216 ~~v~~~~~Gt~ 226 (711)
T 4hvt_A 216 NSLYIWKRGES 226 (711)
T ss_dssp CEEEEEETTSC
T ss_pred CEEEEEECCCC
Confidence 46888877654
No 405
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=21.09 E-value=2.7e+02 Score=20.99 Aligned_cols=250 Identities=9% Similarity=-0.043 Sum_probs=119.8
Q ss_pred CCCceEEEEeecCCeEEEEEcCCcc----ccceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc---CC------C
Q 022590 20 VDGIPFLVAGGINGIIRVIDVSNEK----LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV---QT------G 86 (294)
Q Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~---~~------~ 86 (294)
|+.. ++++.+.+|.|+--.+.+-+ ....++.. +.+..+.... ..+.|+..+..|.+.-... .. |
T Consensus 3 ~~e~-~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~-t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASED-VIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMN-TKDVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCE-EEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCc-EEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 4555 88999999999987654221 11123333 3444444433 3455666677787654443 22 2
Q ss_pred ceEEEeeccCCCCCceeEEEEecC--CCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceEEeecC
Q 022590 87 ICILIFAGAGGHRNEVLSVDFHPS--DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 164 (294)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~l~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
.++..+-.+ .....|.++...+. ++.+++.++.+|.++--.+........ .- ......+...
T Consensus 80 ~~i~~~i~L-~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r-~~--------------G~~ai~l~e~ 143 (323)
T 1wp5_A 80 QHIANIIPI-DRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-SK--------------PLTGINLKND 143 (323)
T ss_dssp EEGGGTSCC-CTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-SS--------------CEECSCCCTT
T ss_pred cChhhccCC-CCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc-cC--------------ceEEEEeCCC
Confidence 211111111 12345665543331 255688889999999998876432110 00 0001111111
Q ss_pred CCceeecce-e-cceEEEeeCCCeEEEecCCCCCCCCCCCCceeeeeeecCCCCeeEEEEcccCCcceEEEEcCCCeEEE
Q 022590 165 SNYVDCNRW-L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV 242 (294)
Q Consensus 165 ~~~i~~~~~-~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i 242 (294)
+.+..+.. + .+.++..+.+|.+..+....-..............+. ....+..+...+++. ..++..+..|..+.
T Consensus 144 -d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~-~~ll~vt~~G~gKr 220 (323)
T 1wp5_A 144 -DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKD-ESIVVATQRGAVKK 220 (323)
T ss_dssp -CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTT-CEEEEEETTSEEEE
T ss_pred -CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCC-cEEEEEECCCceEE
Confidence 22222222 2 5567777888888777765432111111111112222 234455554443331 25777888999888
Q ss_pred EeccCCCc-----eeeeecc-ccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 243 WELQSSPP-----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 243 ~d~~~~~~-----~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
.++..... .-...+. .......+..+....++..++..+.+|.+...++
T Consensus 221 ~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~ 275 (323)
T 1wp5_A 221 MKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKV 275 (323)
T ss_dssp EEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEG
T ss_pred EEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEh
Confidence 88765210 0111111 1011224543333333445556666776655544
No 406
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=20.88 E-value=3e+02 Score=21.42 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=115.9
Q ss_pred EEEEeecCCeEEEEEcCCc-cc------------cceecccCcceEEEEeCCCCCceEEEeeCCCcEEEEEc--CC-Cce
Q 022590 25 FLVAGGINGIIRVIDVSNE-KL------------HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QT-GIC 88 (294)
Q Consensus 25 ~l~~~~~dg~i~iw~~~~~-~~------------~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~-~~~ 88 (294)
+.+.-..||.|+.|-.... ++ ...+ .-...|..++... ...+.-..||.|..|-. .. ++.
T Consensus 70 hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v-~l~~~i~~va~G~---~hs~alt~~G~v~~wG~~~n~~Gql 145 (413)
T 1a12_A 70 HTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV-ELQEKVVQVSAGD---SHTAALTDDGRVFLWGSFRDNNGVI 145 (413)
T ss_dssp EEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEEC-CCCSCEEEEEECS---SEEEEEETTSCEEEEECEEETTEEE
T ss_pred eEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEe-cCCCcEEEEecCC---CeEEEEcCCCcEEEeeCCcCCCCcc
Confidence 5556668899999975431 10 0011 1123566666543 45566678899999964 21 110
Q ss_pred ---------EEEeeccCCCCCceeEEEEecCCCceEEeeecCCcEEEEeccccccccccceeecCCCCCCCCceeeeceE
Q 022590 89 ---------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 159 (294)
Q Consensus 89 ---------~~~~~~~~~~~~~v~~l~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
...... .....|..|+. .....+.-..||.|..|-.....+.-....................|..
T Consensus 146 G~~~~~~~~~~P~~v--~~~~~i~~ia~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~ 220 (413)
T 1a12_A 146 GLLEPMKKSMVPVQV--QLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 220 (413)
T ss_dssp ESSBBTBCEEEEEEE--CCSSCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEE
T ss_pred CcCCccccccCCEEe--cCCCCEEEEEe---cCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCce
Confidence 000010 12345666665 3344555678999999987653221110000000000000000001100
Q ss_pred -Eeec----CCCceeecceecceEEEeeCCCeEEEecCCCCCCCCCCCCce--eeeeeec-CC--CCeeEEEEcccCCcc
Q 022590 160 -IASV----HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD--ILQKYPV-PE--CDIWFIKFSCDFHYN 229 (294)
Q Consensus 160 -~~~~----~~~~i~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~-~~--~~i~~~~~~~~~~~~ 229 (294)
.+.. ....|..++--....+.-..+|.|..|-.....+........ ....+.. .. ..+..++... .
T Consensus 221 v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~----~ 296 (413)
T 1a12_A 221 VMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQ----H 296 (413)
T ss_dssp CCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECS----S
T ss_pred EeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEeccc----c
Confidence 0000 223455555545566666789999999766433221111100 1111111 11 2344444332 2
Q ss_pred eEEEEcCCCeEEEEeccCC---------Cce-eeeeccccccCCCeEEEEEccCCCEEEEeccCCcEEEEec
Q 022590 230 AAAIGNREGKIFVWELQSS---------PPV-LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 291 (294)
Q Consensus 230 ~l~~~~~dg~i~i~d~~~~---------~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 291 (294)
..++-..+|.|+.|=.... +.. ....+. ....|..++... .+.+.-..||.|+.|-.
T Consensus 297 hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~---~l~~v~~v~~G~--~hs~alt~~G~v~~wG~ 363 (413)
T 1a12_A 297 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS---RLPAVSSVACGA--SVGYAVTKDGRVFAWGM 363 (413)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECC---SSSSEEEEEECS--SEEEEEETTSCEEEEEC
T ss_pred eEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEec---ccCceeEEEECc--ceEEEEeCCCCEEEecC
Confidence 4455567899999965431 100 111111 112566666543 34455557888988854
Done!