BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022591
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41
PE=2 SV=1
Length = 263
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/298 (60%), Positives = 206/298 (69%), Gaps = 43/298 (14%)
Query: 1 MRMSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
MRMSCNGCRVLRKGC+E+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP H
Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60
Query: 61 LRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAAIG 120
LRP +FRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+ I ++AA IG
Sbjct: 61 LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120
Query: 121 QGPPLKAYDIRHVSKDENSPAS------VDRVKTRCRVKRVVKPKANCNKAEVNMVDELA 174
QGPPLK YDIRH+SKD+NS A+ + KTR R KRV + V + E
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTR-RAKRV---------STVAIQAE-- 168
Query: 175 RCAEEMNRSTSHESSLSHQSEL-AVVENESKESDSMVSAETAETASLLFRAEPESGAKPS 233
+E + SH+SSLSHQSE+ A E ESKES+S VS L F G+
Sbjct: 169 --SEGKSDEASHDSSLSHQSEIVAAHEGESKESESNVS------EVLAFSPPAVKGS--- 217
Query: 234 ERVGWDSCGEIGLGLELTLGFEPVAVSRANHVVPMKKRKLEDRSTCDVD-TCKVELGL 290
GEI L+LTL EP VSRA HVVP+KKR++ TC + TCK EL L
Sbjct: 218 --------GEI--KLDLTLRLEP--VSRAYHVVPVKKRRIGVFGTCQKESTCKTELML 263
>sp|Q9CA30|LBD42_ARATH LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42
PE=2 SV=1
Length = 233
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 170/258 (65%), Gaps = 30/258 (11%)
Query: 1 MRMSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
MR+SCNGCRVLRKGCN++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GP+H
Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60
Query: 61 LRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAA 118
LRPA+FRSLLYEACGRIVNP+ GSVGL+WSG+W CQAAV+AVL G PI TP+ S +A+
Sbjct: 61 LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120
Query: 119 IGQGPPLKAYDIRHVSKDENSPA-SVDRVKTRCRVKRVVKPKANCNKAEVNMVDELARCA 177
PP + YDIRHV+KD + S + + TR K K + + V++L C+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNAN---KSKTQTGRFKRESVNQLGECS 177
Query: 178 EEMNRSTSHESSLSHQSELAVVEN-ESKESDSMVSAETAETASLLFRAEPESGAKPSERV 236
+M + S SS +H +EN ES+ R P + + P+ +
Sbjct: 178 HDMWQLPS--SSATHGYGHFTLENVESR------------------REAPFNQSSPN--L 215
Query: 237 GWDSCGEIG-LGLELTLG 253
G+D +I +GLEL LG
Sbjct: 216 GFDDQVDINEVGLELRLG 233
>sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38
PE=2 SV=1
Length = 247
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 96/110 (87%)
Query: 3 MSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
MSCNGCRVLRKGC+ENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A PE
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 63 PAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPI 112
PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G + PI
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110
>sp|Q9FN11|LBD37_ARATH LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37
PE=2 SV=1
Length = 250
Score = 174 bits (440), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 96/110 (87%)
Query: 3 MSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
MSCNGCRVLRKGC+ENC +RPC+QWI++ ++Q +ATVF+AKF+GRAGLM+ I+A P+ R
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60
Query: 63 PAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPI 112
PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G + PI
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110
>sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39
PE=2 SV=1
Length = 240
Score = 171 bits (434), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 95/111 (85%)
Query: 3 MSCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
MSCNGCRVLRKGC+E C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ I++ PE R
Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 63 PAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPIN 113
PA+F+SLL+EACGR VNP+ G+VG+LW+ +W +CQAAVE VL+G + PI+
Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS 111
>sp|O64836|LBD10_ARATH LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10
PE=2 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C + C P P + +F+ + +G + + ++N P R
Sbjct: 6 CAACKLLRRKCTQECVFAPYF-----PPTNPQKFIFVHRVFGASNVTKILNDLPPDQRED 60
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA RI +PIYG VGL+
Sbjct: 61 TVNSLFYEAEARIRDPIYGCVGLI 84
>sp|Q9SJW5|LBD14_ARATH LOB domain-containing protein 14 OS=Arabidopsis thaliana GN=LBD14
PE=2 SV=1
Length = 188
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C GC+ LR+ C E C P + E +N + K +G + LI+ P+H R
Sbjct: 8 CGGCKFLRRKCVEGCVFAP---YFCYEEGSSNFAA-IHKVFGASNFSKLISHLPDHDRCD 63
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVL 104
R++ YEA R+ +PIYG V ++S Q+ + VL
Sbjct: 64 AVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVL 103
>sp|Q9ZW96|LBD40_ARATH LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40
PE=2 SV=1
Length = 233
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 4/47 (8%)
Query: 246 LGLELTLGFEPVAVSRANHVV-PMKKRKLEDRSTC-DVDTCKVELGL 290
+GLELTLG EP+A R NHVV PMKKRKLE T D DTCK+ELGL
Sbjct: 185 IGLELTLGLEPLA--RGNHVVVPMKKRKLERCGTSEDEDTCKIELGL 229
>sp|Q9FKZ3|LBD36_ARATH LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36
PE=2 SV=1
Length = 313
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C + C P P Q F+ K +G + + L+N + R
Sbjct: 8 CAACKFLRRKCTQECVFAPYF-----PPDQPQKFAFVHKVFGASNVAKLLNELASNQRED 62
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG VGL+
Sbjct: 63 AVNSLFYEAEARLRDPVYGCVGLI 86
>sp|Q9LQR0|LBD1_ARATH LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1
PE=2 SV=1
Length = 190
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C E C + P P A T+ + +G + ++ + PE R
Sbjct: 34 CAACKILRRRCAERCVLAPYF----PPTDPAKFTI-AHRVFGASNIIKFLQELPESQRTD 88
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE 115
S++YEA RI +P+YG G ++ Q+ + ++A L A + +N +
Sbjct: 89 AVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSE--LQAQLAKAQVEMVNMQ 137
>sp|Q9SHE9|LBD4_ARATH LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4
PE=2 SV=1
Length = 172
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C ++C P + + E Q A V + +G + + ++ P H R
Sbjct: 14 CAACKLLRRRCAQDCVFSP---YFPADEPQKFANVH--RVFGASNVNKMLQELPIHQRGD 68
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQL 95
S++YEA R+ +P+YG VG + S Q+
Sbjct: 69 AVSSMVYEANARVRDPVYGCVGAISSLQQQI 99
>sp|Q8LBW3|LBD12_ARATH LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12
PE=2 SV=2
Length = 193
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C ++C P P + + K +G + + ++ P H R
Sbjct: 9 CASCKLLRRRCAKDCIFAPYF-----PPDDPHKFAIVHKVFGASNVSKMLQELPVHQRAD 63
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE 115
SL++EA R+ +P+YG VG + Q+ Q ++ + A I I +
Sbjct: 64 AVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114
>sp|Q9SA51|LBD3_ARATH LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3
PE=2 SV=1
Length = 165
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 5 CNGCRVLRKGC-NENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 63
C GC++LR+ C ++C P P + + K +G + + ++ E+ R
Sbjct: 15 CAGCKLLRRKCVKDSCVFAPYF-----PAKEPYKFAIVHKIFGASNVNKMLQELSENHRS 69
Query: 64 AVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAAIGQGP 123
S++YEA RI +P+YG VG + S QL + A + I + + P
Sbjct: 70 DAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHRIHTKPP 129
Query: 124 PLKA 127
P A
Sbjct: 130 PYTA 133
>sp|Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11
PE=2 SV=2
Length = 232
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C + C + P P A T+ + +G + ++ + PE R
Sbjct: 56 CAACKILRRRCADKCVLAPYF----PPTDPAKFTI-AHRVFGASNIIKFLQELPESQRTD 110
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLW 89
S++YEA R+ +P+YG G ++
Sbjct: 111 AVNSMVYEAGARMRDPVYGCAGAIY 135
>sp|O22132|LBD19_ARATH LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19
PE=2 SV=1
Length = 191
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 7 GCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAVF 66
C+ LR+ C + C P + + + A + K +G + ++ P H R
Sbjct: 19 ACKFLRRKCVKGCVFAP---YFDAEQGTARFAA-VHKVFGASNASKMLLRLPLHKRLDAV 74
Query: 67 RSLLYEACGRIVNPIYGSVGLLWSGSWQLCQ-----AAVEAVLKGAPITPINSEAAAIGQ 121
+L YEA RI +P+YGSVG L+S Q+ A V+A L P+ S
Sbjct: 75 VTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPLQSPQQ---M 131
Query: 122 GPPLKAYDIRHVSKDENSPASVDRV 146
PP ++D H ++ P+++D V
Sbjct: 132 QPP--SFDPAHNNEYAMEPSNLDSV 154
>sp|O81323|LBD30_ARATH LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30
PE=2 SV=1
Length = 228
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 8 CRVLRKGCNENCSIRPCLQWIKSPESQANATVFLA--KFYGRAGLMNLINAGPEHLRPAV 65
C+ LR+ C C P +S+ A F A K +G + + L++ PEH RP
Sbjct: 21 CKFLRRKCVAGCIFAPYF------DSEQGAAHFAAVHKVFGASNVSKLLHHVPEHKRPDA 74
Query: 66 FRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVE 101
S+ +EA R+ +PIYG V + S Q+ E
Sbjct: 75 VVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTE 110
>sp|O81322|LBD31_ARATH LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31
PE=2 SV=2
Length = 220
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P + S E ++ T + K +G + L+ P R
Sbjct: 12 CGACKFLRRKCVADCVFAP---YFDSVEGTSHFTA-VHKVFGASNASKLLMMIPASRRLD 67
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVE--------AVLKGAPITPINSE 115
+L YEA R+ +P+YG VG +++ Q+ E + L+G P P NS+
Sbjct: 68 AVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQGLP--PPNSQ 124
>sp|Q9LHS8|LBD33_ARATH LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33
PE=2 SV=1
Length = 177
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 4 SCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 63
SC C+ LR+ CN +C P + E ++ + K +G + + + P+H R
Sbjct: 7 SCGACKFLRRKCNRDCVFSPYFSY----EQASSHFAAVHKVFGASNVSKHLLHLPQHQRN 62
Query: 64 AVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI 109
++ YEA R+ +P+YG V +++ Q+ E G+ +
Sbjct: 63 IAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQM 108
>sp|P59467|LBD23_ARATH LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23
PE=2 SV=1
Length = 121
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C ++C P + + Q A V + YG + ++ P+ R
Sbjct: 6 CAACKYLRRRCPKDCVFSP---YFPPNDPQKFACVH--RIYGAGNVSKMLQQLPDQTRAE 60
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQL 95
SL +EA R+ +P+YG VG++ Q+
Sbjct: 61 AVESLCFEAKCRVDDPVYGCVGIIHLLKTQI 91
>sp|Q9SRL8|LBD21_ARATH LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21
PE=2 SV=1
Length = 165
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 4 SCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 63
SC C++L++ C C P + +S + A V K +G + + L+ PE R
Sbjct: 11 SCAACKLLKRRCTPTCIFAP---YFRSSDLITFAKVH--KVFGASNVSKLLGEVPEEQRQ 65
Query: 64 AVFRSLLYEACGRIVNPIYGSVGLLWS 90
SL YEA R+ +P+YG +G + S
Sbjct: 66 ETVNSLAYEAEVRLKDPVYGCIGAIAS 92
>sp|P59468|LBD24_ARATH LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24
PE=2 SV=1
Length = 121
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C ++C P + + Q A V + YG + ++ P+ R
Sbjct: 6 CAACKYLRRRCPKDCVFSP---YFPPNDPQKFACVH--RIYGAGNVSKMLQQLPDQTRAE 60
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQL 95
SL +EA R+ +P+YG VG++ Q+
Sbjct: 61 AVESLCFEAKCRVDDPVYGCVGIIHLLKTQI 91
>sp|Q9SLB7|LBD16_ARATH LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16
PE=2 SV=1
Length = 245
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P S E A + K +G + + L+ P H R
Sbjct: 16 CGACKFLRRKCASDCIFAPYF----SSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCE 71
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAAIGQGPP 124
++ YEA R+ +P+YG V +++ Q+ + + A I + AA
Sbjct: 72 AVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAG------ 125
Query: 125 LKAYDIRHVSKDEN 138
D+RH S+ N
Sbjct: 126 ----DLRHSSESTN 135
>sp|Q8L5T5|LBD15_ARATH LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15
PE=2 SV=2
Length = 224
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C + C P + E A+V K +G + + ++ PE R
Sbjct: 46 CAACKLLRRRCAQECPFSP---YFSPHEPHKFASVH--KVFGASNVSKMLMEVPESQRAD 100
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL+YEA R+ +P+YG +G +
Sbjct: 101 AANSLVYEANVRLRDPVYGCMGAI 124
>sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB
PE=2 SV=1
Length = 186
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C C P P + + + K +G + + L+N H R
Sbjct: 12 CAACKFLRRKCMPGCIFAPYF-----PPEEPHKFANVHKIFGASNVTKLLNELLPHQRED 66
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG VG +
Sbjct: 67 AVNSLAYEAEARVRDPVYGCVGAI 90
>sp|O04479|LBD6_ARATH LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6
PE=1 SV=1
Length = 199
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C C P P Q + K +G + + L+N R
Sbjct: 10 CAACKFLRRKCQPECVFAPYF-----PPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG VG++
Sbjct: 65 AVNSLAYEADMRLRDPVYGCVGVI 88
>sp|Q8L8Q3|LBD25_ARATH LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25
PE=2 SV=3
Length = 159
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P P + + + +G + + +++ H R
Sbjct: 40 CAACKFLRRKCTSDCVFAPYF-----PPEEPTKFANVHRIFGASNVSKILHEVAPHQRED 94
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG VG +
Sbjct: 95 AVNSLAYEAEARLKDPVYGCVGAI 118
>sp|Q9SRV3|LBD20_ARATH LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20
PE=2 SV=1
Length = 273
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLA--KFYGRAGLMNLINAGPEHLR 62
C C+ LR+ C C P S A F A K +G + + L++ P + R
Sbjct: 52 CGACKFLRRKCVSGCIFAPHF------GSDQGAARFAAVHKVFGASNVSKLLHHIPVNRR 105
Query: 63 PAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA 117
++ YEA R+ +P+YG V + + Q+ A+++A L INS A
Sbjct: 106 HDAVVTISYEAQARLSDPVYGCVSTILALQQQV--ASLQAELSVVQSQLINSRVA 158
>sp|O22131|LBD18_ARATH LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18
PE=2 SV=2
Length = 262
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 7 GCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLA--KFYGRAGLMNLINAGPEHLRPA 64
C+ LR+ C C P +S+ + F A K +G + + L+ P H R
Sbjct: 40 ACKFLRRKCVPGCIFAPYF------DSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSD 93
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVE 101
++ YEA RI +PIYG V +++ Q+ E
Sbjct: 94 AVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAE 130
>sp|A1YKY7|IAL1_MAIZE Protein IAL1 OS=Zea mays PE=2 SV=1
Length = 269
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P P V + + +G + + L+N R
Sbjct: 34 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVRVHRVFGASNVTKLMNEIHPLQRED 88
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA RI +P+YG VG++
Sbjct: 89 AMNSLAYEADMRIRDPVYGCVGVI 112
>sp|Q32SG3|LBD6_MAIZE LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1
Length = 260
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P P V + + +G + + L+N R
Sbjct: 34 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPFQRED 88
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG VG++
Sbjct: 89 AVNSLAYEADMRLRDPVYGCVGVI 112
>sp|Q9AT61|LBD13_ARATH LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13
PE=2 SV=2
Length = 268
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C++LR+ C E C P + E A V K +G + + ++ E R
Sbjct: 53 CAACKLLRRRCAEECPFSP---YFSPHEPHKFAAVH--KVFGASNVSKMLLEVGESQRGD 107
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL+YEA R+ +PIYG +G +
Sbjct: 108 AANSLVYEANLRLRDPIYGCMGAI 131
>sp|Q8LQH4|LBD6_ORYSJ LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica
GN=LBD6 PE=2 SV=1
Length = 269
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P P V + + +G + + L+N + R
Sbjct: 39 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPYQRED 93
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG V ++
Sbjct: 94 AVNSLAYEADMRLRDPVYGCVAII 117
>sp|A2WXT0|LBD6_ORYSI LOB domain-containing protein 6 OS=Oryza sativa subsp. indica
GN=LBD6 PE=3 SV=1
Length = 269
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C +C P P V + + +G + + L+N + R
Sbjct: 39 CAACKFLRRKCQPDCVFAPYF-----PPDNPQKFVHVHRVFGASNVTKLLNELHPYQRED 93
Query: 65 VFRSLLYEACGRIVNPIYGSVGLL 88
SL YEA R+ +P+YG V ++
Sbjct: 94 AVNSLAYEADMRLRDPVYGCVAII 117
>sp|Q9LNB9|LBD2_ARATH LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2
PE=2 SV=2
Length = 206
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 4 SCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 63
+C C+ RK CN C + P K+ E QA + K +G + + ++ E R
Sbjct: 24 ACASCKHQRKKCNNECILSPYFPARKTKEFQA-----VHKVFGVSNVQKMVRTVREEDRT 78
Query: 64 AVFRSLLYEACGRIVNPIYGSVG 86
+ SL +EA R +P+ GS G
Sbjct: 79 KLSDSLTWEALWRQKDPVLGSYG 101
>sp|Q9M2J7|LBD29_ARATH LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29
PE=2 SV=1
Length = 218
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C + C P E A+ + K +G + L++ P R
Sbjct: 12 CGACKFLRRKCAKGCVFAPYF----CHEQGASHFAAIHKVFGASNASKLLSHLPISDRCE 67
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQLC--QAAVEAVLKGAPITPINSEA 116
++ YEA R+ +PIYG V +++ Q+ QA +E + + A + I +++
Sbjct: 68 AAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121
>sp|Q9SCS4|LBD28_ARATH LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28
PE=2 SV=1
Length = 198
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C E+C P P ++ + + K +G + + LIN+ R
Sbjct: 13 CAACKHLRRKCTEDCVFAPYF-----PSTKLDNYEAVHKVFGASHVATLINSLHPCQREF 67
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWS 90
+L +EA + +P+ G +G++++
Sbjct: 68 AMDTLAWEAQVQANDPVNGCLGIIYN 93
>sp|Q9SLB6|LBD17_ARATH LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17
PE=2 SV=1
Length = 244
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPA 64
C C+ LR+ C + C P E A+ + + +G + L++ P R
Sbjct: 8 CGACKFLRRRCVKGCVFAPYF----CHEQGASHFAAIHQVFGASNASKLLSHLPMEDRRE 63
Query: 65 VFRSLLYEACGRIVNPIYGSVGLLWSGSWQL 95
++ YEA R +PIYG V ++S Q+
Sbjct: 64 AATTIYYEAQARRQDPIYGCVSHIFSLQQQV 94
>sp|Q9SSM9|LBD7_ARATH LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7
PE=2 SV=1
Length = 214
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 4 SCNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRP 63
+C C+ RK C +NC + P+ N + K +G + + ++ E R
Sbjct: 13 ACAACKHQRKKCKKNCILARYF-----PQDGTNKFLNAHKLFGVSNITKMLKRIEESQRD 67
Query: 64 AVFRSLLYEACGRIVNPIYG 83
+L+Y A R ++P+ G
Sbjct: 68 IAMENLIYHANARALDPVGG 87
>sp|Q6AYT5|CF211_RAT UPF0364 protein C6orf211 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 439
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 118 AIGQGPPLKAYDIRHVSKDENSPASVDRVKTRCRVKRVVKPKANCNKAEVNMVDELARCA 177
AI Q PP+ +D+ SKDEN S D + C +KP + + ++ DE +
Sbjct: 127 AIMQSPPIHDFDVFKESKDENFFESQDSINALCTHLLQLKPITDLGEKQIQ--DEFFKLL 184
Query: 178 E 178
+
Sbjct: 185 Q 185
>sp|Q9FFL3|LBD35_ARATH LOB domain-containing protein 35 OS=Arabidopsis thaliana GN=LBD35
PE=2 SV=1
Length = 206
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 5 CNGCRVLRKGCNENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLI-NAGPEHLRP 63
C+ C+V++ C NC P P + L + +G + ++ N P
Sbjct: 6 CSACKVMKCDCAPNCIFAP-----HFPLTNLETFERLHRIFGAGNVFKILANLDPIQRET 60
Query: 64 AVFRSLLYEACGRIVNPIYGSVGLLWSGSWQL 95
AV +L YEA +PI+G VG+ QL
Sbjct: 61 AV-NALCYEAEALERDPIFGCVGIFNHYKNQL 91
>sp|Q6FPI5|SED4_CANGA Putative guanine nucleotide-exchange factor SED4 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=SED4 PE=3 SV=1
Length = 1029
Score = 33.1 bits (74), Expect = 2.7, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 178 EEMNRSTSHESSLSHQSELAVVENE--SKESDSMVSAETAET--ASLLFRAEPESGAKPS 233
EE +++S+ESSLS +E V NE S +S S VS E E +S L +PES + S
Sbjct: 746 EEAVKTSSNESSLSQVTEELVKNNERVSNQSLSTVSTEHTEMKESSNLTEKKPESNSPES 805
>sp|Q2KBP6|BION_RHIEC Energy-coupling factor transporter transmembrane protein BioN
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=bioN
PE=1 SV=1
Length = 202
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 209 MVSAETAETASLLFRAEPESGAKPSERVGWDSCGEIGLGLELTLGFEPVAVSR 261
+ ++ TA T F E + A+P ER G +IGL L L L F P V+R
Sbjct: 101 LAASVTATTTITEFIDEVTALARPLERTGRVQADDIGLALGLVLRFVPEIVNR 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,032,039
Number of Sequences: 539616
Number of extensions: 4162950
Number of successful extensions: 11484
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 11400
Number of HSP's gapped (non-prelim): 77
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)