BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022592
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JC0|RRP8_ARATH Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana
GN=At5g40530 PE=2 SV=1
Length = 287
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/275 (70%), Positives = 221/275 (80%), Gaps = 8/275 (2%)
Query: 20 KPQDQESYQSKSTAKTTAKKHKQDTVKNNEQQYEHHQTSAAASAKRPKPSSFLDKMRARL 79
KP +E ++ T K +K Q KN + H S+A S KRPKPS+FLD +R RL
Sbjct: 21 KPSKEEPIET--TPKNQNEKKNQRDTKN-----QQHGGSSAPS-KRPKPSNFLDALRERL 72
Query: 80 SGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDH 139
SGG FRMLNEKLYTC+GKEALDYF E+P +FDMYH+GYQ+QMS+WPELPVN I+ WL +
Sbjct: 73 SGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNWPELPVNSIINWLLSN 132
Query: 140 SPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSL 199
S SLV+ADFGCGDAR+AKSVKNKVFSFDLVS +PSVIACDMSNT L SSSVDVAVFCLSL
Sbjct: 133 SSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTSLESSSVDVAVFCLSL 192
Query: 200 MGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS 259
MG N+ +Y++EA RVL+PSG LLIAEVKSRFDPN GGADP F KAVCDLGF V KDFS
Sbjct: 193 MGTNYSSYIKEAHRVLRPSGMLLIAEVKSRFDPNNGGADPKDFVKAVCDLGFTSVLKDFS 252
Query: 260 NKMFIMFYFKKKEKQNSKSKEIQWPELKPCLYKRR 294
NKMFI+F+FKKKE+ NS K I+WPELK CLYKRR
Sbjct: 253 NKMFILFHFKKKEQMNSNQKIIKWPELKACLYKRR 287
>sp|O43159|RRP8_HUMAN Ribosomal RNA-processing protein 8 OS=Homo sapiens GN=RRP8 PE=1
SV=2
Length = 456
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 137/222 (61%), Gaps = 7/222 (3%)
Query: 74 KMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIV 133
+M RL G FR LNE+LY+ A F E+P F +YH G+Q Q+ WP PV+ I
Sbjct: 241 RMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIA 300
Query: 134 KWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVA 193
+ L+ SLV+ADFGCGD RLA S++N V FDL S DP V CDM+ PL SVDVA
Sbjct: 301 RDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVA 360
Query: 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253
VFCLSLMG N ++L+EA RVLKP G L +AEV SRF+ D F +AV LGF
Sbjct: 361 VFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKI 414
Query: 254 VSKDFSNKMFIMFYFKKKEKQNSKSK-EIQWPELKPCLYKRR 294
VSKD +N F +F F+K K ++ +L+PCLYKRR
Sbjct: 415 VSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR 456
>sp|Q9DB85|RRP8_MOUSE Ribosomal RNA-processing protein 8 OS=Mus musculus GN=Rrp8 PE=1
SV=1
Length = 457
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 74 KMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIV 133
+M RL G FR LNE+LY+ A F E+P F +YH G+Q Q+ WP PV+ I
Sbjct: 242 RMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIA 301
Query: 134 KWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVA 193
K L+ SLV+ADFGCGD RLA SV+N V FDL S DP V CDM+ PL SVDVA
Sbjct: 302 KDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVA 361
Query: 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253
VFCLSLMG N ++L+EA RVLK G L +AEV SRF+ D F AV LGF
Sbjct: 362 VFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFE------DIRTFLGAVTKLGFKI 415
Query: 254 VSKDFSNKMFIMFYFKKKEKQNSKSK-EIQWPELKPCLYKRR 294
+ KD +N F +F F+K K ++ +L+PCLYKRR
Sbjct: 416 IYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 457
>sp|Q5U4F0|RRP8_RAT Ribosomal RNA-processing protein 8 OS=Rattus norvegicus GN=Rrp8
PE=2 SV=1
Length = 457
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 74 KMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIV 133
+M RL G FR LNE+LY+ A F E+P F +YH G+Q Q+ WP PV+ I
Sbjct: 242 RMTQRLDGARFRYLNEQLYSGPSSAAQCLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIA 301
Query: 134 KWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVA 193
K L+ SLV+ADFGCGD RLA SV+N V FDL + DP V CDM+ PL SVDVA
Sbjct: 302 KDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVA 361
Query: 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253
VFCLSLMG N ++L+EA RVLKP G L +AEV SRF+ D F AV LGF
Sbjct: 362 VFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE------DIRTFLGAVTKLGFKV 415
Query: 254 VSKDFSNKMFIMFYFKKKEKQNSKSK-EIQWPELKPCLYKRR 294
+ KD +N F +F F+K K ++ +L+PCLYK R
Sbjct: 416 IYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKHR 457
>sp|Q10257|RRP8_SCHPO Ribosomal RNA-processing protein 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp8 PE=3 SV=1
Length = 318
Score = 204 bits (518), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 156/246 (63%), Gaps = 18/246 (7%)
Query: 61 ASAKRPKPSSFLDKMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQ 120
AK K +S KM+ +L G +FR +NE+LYT +A+ F ENP LFD+YH+G++ Q
Sbjct: 79 GDAKHTKLTSLQQKMKDKLDGANFRWINEQLYTTESDKAVQMFKENPDLFDIYHAGFRYQ 138
Query: 121 MSHWPELPVNIIVKWLK---DHSPS-----LVIADFGCGDARLAKSVKN----KVFSFDL 168
+ WPE PV+I ++ LK +HS + +VIAD GCG+A++A + + +V SFDL
Sbjct: 139 VEGWPENPVDIFIQHLKIRFEHSNAKKKNNIVIADLGCGEAKIASTFRKSRSLQVHSFDL 198
Query: 169 VSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKS 228
V+ + V+ACD++N P+ +VD+AVFCLSLMG N+ ++L+EA R+LK G L +AE+KS
Sbjct: 199 VAPNEHVVACDIANVPMADETVDIAVFCLSLMGTNWQSFLKEAYRILKVGGLLWVAEIKS 258
Query: 229 RFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEKQNSKSKEIQWPELKP 288
RF +G F+K + LGF S NKMF +F FKK + K +E+ P L
Sbjct: 259 RFSDKSGEV----FAKELPKLGFETKSIQLQNKMFTLFEFKKVP-VHGKCEELP-PILSA 312
Query: 289 CLYKRR 294
C+YKRR
Sbjct: 313 CIYKRR 318
>sp|O44410|RRP8_CAEEL Ribosomal RNA-processing protein 8 OS=Caenorhabditis elegans
GN=T07A9.8 PE=3 SV=1
Length = 343
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 143/234 (61%), Gaps = 10/234 (4%)
Query: 63 AKRPKPSSFLDKMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMS 122
A P+ + + + + RL G FR LNEKLYTCTG EA D+F E+P FD+YH G+ +Q+
Sbjct: 118 AAAPEEADPIAEAKKRLDAGRFRFLNEKLYTCTGSEAFDFFKEDPTAFDLYHKGFADQVK 177
Query: 123 HWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSV--KNKVFSFDLVSNDPSVIACDM 180
WP P+ I++WL+ + D GCG+A++A++V K+K+ SFDLV+ + V +CDM
Sbjct: 178 KWPNHPLREIIRWLQSKPDQQSVFDLGCGEAKIAEAVGEKHKIRSFDLVAVNDRVESCDM 237
Query: 181 SNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPN 240
S P SS D+ ++CLSLMG N ++++EA+RVLK G L IAEV SRF
Sbjct: 238 SKLPAEDSSADIVIYCLSLMGTNLYDFIREARRVLKIGGILKIAEVTSRF------VSIK 291
Query: 241 KFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEKQNSKSKEIQWPELKPCLYKRR 294
+F +A+ +GF + F+M FKK EK + K +LKPCLYK+R
Sbjct: 292 QFCEAITKMGFEQSHRRELTDYFMMMEFKKVEK--VEQKRPYGLKLKPCLYKKR 343
>sp|A8XI07|RRP8_CAEBR Ribosomal RNA-processing protein 8 OS=Caenorhabditis briggsae
GN=CBG13492 PE=3 SV=1
Length = 332
Score = 194 bits (492), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 136/221 (61%), Gaps = 10/221 (4%)
Query: 76 RARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKW 135
+ RL G FRMLNEKLYTCTG EA D+F E+ FD+YH G+ +Q+ WP P+ I++W
Sbjct: 120 KKRLDAGRFRMLNEKLYTCTGSEAFDFFKEDRTAFDLYHRGFADQVKKWPNHPLREIIRW 179
Query: 136 LKDHSPSLVIADFGCGDARLAKSV--KNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVA 193
L+ + D GCG+A++A++V K+ + SFDLV+ + V +CDMS P S DV
Sbjct: 180 LQAKPDKQAVFDLGCGEAKIAEAVGEKHTIRSFDLVAVNDRVESCDMSKLPAEDGSADVV 239
Query: 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253
+FCLSLMG N ++++EA+RVL+ G L I EV SRF +F +A+ +GF
Sbjct: 240 IFCLSLMGTNLYDFIKEARRVLRTGGVLKIGEVTSRF------VSIKQFCEAINKMGFET 293
Query: 254 VSKDFSNKMFIMFYFKKKEKQNSKSKEIQWPELKPCLYKRR 294
++ F+MF F+K +K + K +LKPCLYK+R
Sbjct: 294 TNRRQLTDYFMMFDFRKIDK--VEQKRPYGLKLKPCLYKKR 332
>sp|Q54CP1|RRP8_DICDI Ribosomal RNA-processing protein 8 OS=Dictyostelium discoideum
GN=rrp8 PE=3 SV=1
Length = 390
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 21/243 (8%)
Query: 67 KPSSFLDKMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPE 126
K + ++M +L G FR LNE LYT KEA F+E+ +LFD YHSG++ Q+ WP
Sbjct: 154 KTTDLQNEMSEKLKGSRFRWLNETLYTTHSKEAFKEFSEDRSLFDQYHSGFKSQVESWPI 213
Query: 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNK--VFSFDLVSNDPSVIACDMSNTP 184
P+++I+ L IAD GCG+A+LA+ +++K + SFDLV+ + V ACD+SN P
Sbjct: 214 NPLDLIIDDLSSIKQRKRIADLGCGEAKLAERLQHKHTIQSFDLVAVNERVTACDISNLP 273
Query: 185 LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSK 244
L + S+D+AVFCLSLMG NF +++ EA+RVL G L IAE++SR D N F+
Sbjct: 274 LKNESIDIAVFCLSLMGTNFIDFIIEAERVLVKGGLLKIAEIESRI------TDINAFTN 327
Query: 245 AVCDLGFAPVSKDFSNKMFIMFYFKKKEKQNSK-------------SKEIQWPELKPCLY 291
+ GF + K+ N+ F +F F K +K++ + + P LKPCLY
Sbjct: 328 EIQQHGFNLIKKNEQNQYFTLFEFSKLQKKDQQFMRSLKQYQKLKKQQATNEPVLKPCLY 387
Query: 292 KRR 294
K+R
Sbjct: 388 KKR 390
>sp|Q7K2B0|RRP8_DROME Ribosomal RNA-processing protein 8 OS=Drosophila melanogaster
GN=CG7137 PE=1 SV=1
Length = 358
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 148/235 (62%), Gaps = 7/235 (2%)
Query: 60 AASAKRPKPSSFLDKMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQE 119
A S+ P +S K+++ L GG FR +NE+LY+ T ++A F ++ + F+ YH+GY++
Sbjct: 131 ATSSTTPAANSLASKLQSELLGGRFRYINEQLYSTTSRKAEALFRKDSSAFEAYHAGYRQ 190
Query: 120 QMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACD 179
Q+ WP P+N I+K +K + +I DFGCG+ +LA+SV NKV+S DLV+ +IAC+
Sbjct: 191 QVEKWPINPLNRIIKTIKKIPKTAIIGDFGCGEGKLAQSVPNKVYSMDLVAARSDIIACN 250
Query: 180 MSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADP 239
+++TPL + ++DVAV+CLSLMG + + EA RVLK G + IAE++SRF D
Sbjct: 251 ITDTPLQARTLDVAVYCLSLMGTDLNEFFLEANRVLKLHGTVYIAEIQSRFQ------DV 304
Query: 240 NKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEKQNSKSKEIQWPELKPCLYKRR 294
+F + + GF KD + F F FKK + K+ +++ LKPCLY++R
Sbjct: 305 REFVRCLNACGFDLNKKDVAVNYFYFFQFKKM-RHVPKNTKMKAFSLKPCLYRKR 358
>sp|P38961|RRP8_YEAST Ribosomal RNA-processing protein 8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP8 PE=1 SV=2
Length = 392
Score = 167 bits (423), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 166/358 (46%), Gaps = 74/358 (20%)
Query: 6 SRKRKRRRRHNSNSKPQDQESYQSKSTAKTTAKKHKQDTVKNNEQQYEHHQTSAAASAKR 65
+R++K + + K Q ++ S AK KK+++ + +N + H A +
Sbjct: 40 TREQKLKEETEAELKEQVEDIPSEGSVAKDIPKKNQEKSDQNETSKKRKHDEEAPLMQVK 99
Query: 66 P---KPSS-----FLDKMRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGY 117
KP+ KM A+L+G FR +NE+LYT + EAL E P LFD YH G+
Sbjct: 100 ENIEKPTKKQLTPLQQKMMAKLTGSRFRWINEQLYTISSDEALKLIKEQPQLFDEYHDGF 159
Query: 118 QEQMSHWPELPVNIIVKWLK----------------DHSPSLVIADFGCGDARLAKSVKN 161
+ Q+ WPE PV++ V ++ S +VIAD GCG+A+LA + N
Sbjct: 160 RSQVQAWPENPVDVFVDQIRYRCMKPVNAPGGLPGLKDSKEIVIADMGCGEAQLALEINN 219
Query: 162 -----------------KVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINF 204
KV SFDL + + D+ N PL S + VFCL+LMG NF
Sbjct: 220 FFKNYNKKAKKYLKRRHKVHSFDLKKANERITVADIRNVPLPDESCTIVVFCLALMGTNF 279
Query: 205 PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFI 264
++++EA R+L P G L IAE+KSRF G N+F A+ +GF NKMF
Sbjct: 280 LDFIKEAYRILAPRGELWIAEIKSRFSDGKG----NEFVDALKLMGFFHKKTFDENKMFT 335
Query: 265 MFYF---------KKKEKQNSKSKEI-------------------QWPELKPCLYKRR 294
F F ++++K + K I +W LKPC+YKRR
Sbjct: 336 RFEFFKPPAEIIEERRQKLERRQKFIEVETEKEELEKKRRKIAEGKWL-LKPCIYKRR 392
>sp|C1D5S5|BIOC_LARHH Malonyl-CoA O-methyltransferase BioC OS=Laribacter hongkongensis
(strain HLHK9) GN=bioC PE=3 SV=1
Length = 297
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 168 LVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPN-YLQEAQRVLKPSGWLLIA-- 224
L + P+++ D+ PL S S+D+ L+L +N P+ L E RVL+ G L+ A
Sbjct: 100 LFARAPALVCADLEQLPLASGSLDMVWSSLALQWLNTPDAVLAEFHRVLRVDGLLMFATL 159
Query: 225 ------EVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMF 263
E++ F G N+F + D+G A V F+ +
Sbjct: 160 GPDTLKELRQAFAGIDGATHVNQFID-MHDMGDALVRAGFATPVM 203
>sp|Q9TYP1|STRM1_CAEEL Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans
GN=strm-1 PE=3 SV=2
Length = 334
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 143 LVIADFGCGDARLAKS-----VKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCL 197
L IADFG + + + N+ F+ +S+ ++A D P S+ DVA
Sbjct: 111 LDIADFGAKLTGVTIAPNEAEIGNEKFANMGISDRCKIVAADCQKMPFEDSTFDVAYAIY 170
Query: 198 SLMGI-NFPNYLQEAQRVLKPSGWLLIAEV 226
SL I N ++E QRVLKP G ++ ++
Sbjct: 171 SLKYIPNLDKVMKEIQRVLKPGGKFIVYDL 200
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 32/134 (23%)
Query: 114 HSGYQEQMSH--------WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-KVF 164
H Y E SH WP IV++LK ++AD GCG+ + K+ +
Sbjct: 376 HQVYNEIASHFSSTRHSPWPR-----IVEFLKALPSGSIVADIGCGNGKYLGINKDLYMI 430
Query: 165 SFDLVSNDPSV--------IACDMSNTPLNSSSVDVAVFCLSLMGINF-------PNYLQ 209
D N + + CD P+ S S D C+S+ I+ LQ
Sbjct: 431 GCDRSQNLVDICRERQFQALVCDALAVPVRSGSCDA---CISIAVIHHFATAERRVEALQ 487
Query: 210 EAQRVLKPSGWLLI 223
E R+L+P G LI
Sbjct: 488 ELARLLRPGGQALI 501
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 111 DMYHSGYQEQMSH--------WPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNK 162
D H Y+E H WP IV++LK ++AD GCG+ + + N+
Sbjct: 373 DYVHRVYEEIARHFSSTRHTPWPH-----IVEFLKALPSGSLVADIGCGNGKYL-GINNE 426
Query: 163 VF------SFDLV----SNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINF-------P 205
++ S +LV CD P+ S S D C+S+ I+
Sbjct: 427 LYMIGCDHSQNLVDICRERQYQAFVCDALAVPIRSGSCDA---CISIAVIHHFATAERRV 483
Query: 206 NYLQEAQRVLKPSGWLLI 223
LQE R+L+P G LI
Sbjct: 484 AALQELVRLLRPGGKALI 501
>sp|Q80WQ4|K1456_MOUSE Putative methyltransferase KIAA1456 OS=Mus musculus GN=Kiaa1456
PE=2 SV=1
Length = 447
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 31/138 (22%)
Query: 102 YFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKN 161
Y N P D+ Q WP + ++L+D P ++AD GCG + K V +
Sbjct: 17 YENTAPYFTDL-------QSKAWPR-----VRQFLQDQKPGSLVADIGCGTGKYLK-VNS 63
Query: 162 KVFSFDLVSNDP----------SVIACDMSNTPLNSSSVDVAVFCLSLMGINFPN----- 206
+V + P V+ CD N P D A+ + ++ +F
Sbjct: 64 QVHTLGCDYCGPLVEIARNRGCEVMVCDNLNLPFRDQGFD-AIISIGVIH-HFSTKERRI 121
Query: 207 -YLQEAQRVLKPSGWLLI 223
++E RVL P G L+I
Sbjct: 122 RAIKEMARVLAPGGQLMI 139
>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens
GN=ALKBH8 PE=1 SV=2
Length = 664
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 32/134 (23%)
Query: 114 HSGYQEQMSH--------WPELPVNIIVKWLKDHSPSLVIADFGCGDAR-LAKSVKNKVF 164
H Y+E H WP IV++LK ++AD GCG+ + L + + +
Sbjct: 376 HQVYEEIAGHFSSTRHTPWPH-----IVEFLKALPSGSIVADIGCGNGKYLGINKELYMI 430
Query: 165 SFDLVSNDPSV--------IACDMSNTPLNSSSVDVAVFCLSLMGINF-------PNYLQ 209
D N + CD P+ S S D C+S+ I+ LQ
Sbjct: 431 GCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDA---CISIAVIHHFATAERRVAALQ 487
Query: 210 EAQRVLKPSGWLLI 223
E R+L+P G LI
Sbjct: 488 EIVRLLRPGGKALI 501
>sp|D1I234|DRE2_VITVI Anamorsin homolog OS=Vitis vinifera GN=VIT_01s0010g01180 PE=3 SV=1
Length = 272
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 172 DPSVI--ACDMSNTPLNSSSVDVAV-FCLSLMGINFP--NYLQEAQRVLKPSGWLLI 223
DP +I A +S P+ SSS+D+ + C SL FP L E RVLKP G +LI
Sbjct: 36 DPLIITQASSLSQLPVESSSLDIVISICRSL---EFPCDKLLAEISRVLKPGGTVLI 89
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 32/134 (23%)
Query: 114 HSGYQEQMSH--------WPELPVNIIVKWLKDHSPSLVIADFGCGDAR-LAKSVKNKVF 164
H Y+E H WP IV++LK ++AD GCG+ + L + + +
Sbjct: 376 HQVYEEIAGHFSSTRHTPWPH-----IVEFLKALPSGSIVADIGCGNGKYLGVNKELYMV 430
Query: 165 SFDLVSNDPSV--------IACDMSNTPLNSSSVDVAVFCLSLMGINF-------PNYLQ 209
D N + CD P+ S S D C+S+ I+ LQ
Sbjct: 431 GCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDA---CISIAVIHHFATAERRVAALQ 487
Query: 210 EAQRVLKPSGWLLI 223
E R+L+P G LI
Sbjct: 488 EIVRLLRPGGKALI 501
>sp|A6LSN5|Y1183_CLOB8 UPF0102 protein Cbei_1183 OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=Cbei_1183 PE=3 SV=1
Length = 123
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTG 235
S++ NF N+L E + K + L+I EVKSR++ N G
Sbjct: 26 SILDCNFKNFLGEIDIICKKNTLLIIVEVKSRYNNNYG 63
>sp|E4QJB8|BIOC_METS6 Malonyl-CoA O-methyltransferase BioC OS=Methylovorus sp. (strain
MP688) GN=bioC PE=3 SV=1
Length = 296
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 156 AKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEA---- 211
A+S+ ++F FD + D+ PL ++S+D+ S M I + N L +A
Sbjct: 91 ARSLVQRLFGFD----RRHAVCADIERLPLAAASIDL---VWSNMAIQWCNDLDQAFGEI 143
Query: 212 QRVLKPSGWLLIAEVKSRFDPNT 234
QRVLKP G L+ S P+T
Sbjct: 144 QRVLKPEGLLMF----STLGPDT 162
>sp|O34954|YODH_BACSU Uncharacterized methyltransferase YodH OS=Bacillus subtilis (strain
168) GN=yodH PE=3 SV=1
Length = 233
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
Query: 140 SPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIA-----------------CDMSN 182
SP I D GCG + A + + ++ +V DP ++ ++ +
Sbjct: 34 SPDQPILDAGCGTGQTAAYLGHLLYPVTVVDKDPIMLEKAKKRFANEGLAIPAYQAELEH 93
Query: 183 TPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225
P +S S + L + LQE RVLKPSG L+ E
Sbjct: 94 LPFSSESFSCVLSESVLSFSRLTSSLQEISRVLKPSGMLIGIE 136
>sp|Q47C02|BIOC_DECAR Malonyl-CoA O-methyltransferase BioC OS=Dechloromonas aromatica
(strain RCB) GN=bioC PE=3 SV=1
Length = 262
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 132 IVKWLKDHSPSLVIADFGCGDARLAKSVKNKV-----FSFDL-------VSNDPSVIACD 179
+ + L D +P+ ++ D GCG +++ + + DL V+ +A D
Sbjct: 43 LAEGLPDIAPTHLL-DAGCGTGYAQANLQTRFPDAHRVALDLSPGMLQRVATPCCRVAGD 101
Query: 180 MSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226
+ + PL SS+D+ L++ + L+EA R L+P G + +A +
Sbjct: 102 LEHLPLADSSLDLYWSSLAVQWCDLAVALREAHRTLRPGGVIALASL 148
>sp|Q99MQ3|PINK1_MOUSE Serine/threonine-protein kinase PINK1, mitochondrial OS=Mus
musculus GN=Pink1 PE=2 SV=2
Length = 580
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 82 GHFR--MLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPV--------NI 131
GH R L K Y CT ++ L+ + L M E + H + + NI
Sbjct: 308 GHGRTLFLVMKNYPCTLRQYLEEQTPSSRLATMMTLQLLEGVDHLVQQGIAHRDLKSDNI 367
Query: 132 IVKWLKDHSPSLVIADFGC 150
+V+W D P LVI+DFGC
Sbjct: 368 LVEWDSDGCPWLVISDFGC 386
>sp|Q2SBD7|BIOC_HAHCH Malonyl-CoA O-methyltransferase BioC OS=Hahella chejuensis (strain
KCTC 2396) GN=bioC PE=3 SV=1
Length = 279
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 32/130 (24%)
Query: 145 IADFGCGDARLAKSVKN-----KVFSFDLVSNDPSVI---------------ACDMSNTP 184
I D GCG L +KN ++ ++DL P +I DM + P
Sbjct: 66 IIDVGCGTGWLTHRLKNSFPEARLCAYDL---SPGMIEYALAHHDNVAEIWAVADMESLP 122
Query: 185 LNSSSVDVAVFCLSLMGINFPN-YLQEAQRVLKPSGWLLIA--------EVKSRFDPNTG 235
+ ++S D+ +++ ++ P + EA RVL+P G L+ + E++ + G
Sbjct: 123 VANASQDLVFSNMAMQWLDDPRAWFAEASRVLRPGGRLICSTLLTQTLFELEQAWHGVDG 182
Query: 236 GADPNKFSKA 245
G N+F A
Sbjct: 183 GRHVNRFLSA 192
>sp|Q08DH3|K1456_BOVIN Putative methyltransferase KIAA1456 homolog OS=Bos taurus PE=2 SV=1
Length = 453
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 24/120 (20%)
Query: 120 QMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFD------LV---- 169
Q WP + ++L++ P +IAD GCG + K V ++V + LV
Sbjct: 28 QSKAWPR-----VRQFLQEQKPGSLIADIGCGTGKYLK-VNSQVHTLGCDYCAPLVEIAR 81
Query: 170 SNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPN------YLQEAQRVLKPSGWLLI 223
S V+ CD N P D A+ + ++ +F ++E RVL P G L+I
Sbjct: 82 SRGCEVMVCDNLNLPFRDQGFD-AIISIGVIH-HFSTKQRRIRAIKEMARVLVPGGQLMI 139
>sp|Q145P0|UBIE_BURXL Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia xenovorans (strain LB400) GN=ubiE PE=3
SV=1
Length = 243
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 176 IACDMSNTPLNSSSVDVAVFCLSLMGINFPNY-LQEAQRVLKPSGWLLIAEVKSRFDP 232
+ CD P + DV L + + L E +RVLKP+G LL+ E +DP
Sbjct: 113 LLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDIALAEMRRVLKPAGRLLVLEFSKVWDP 170
>sp|B2SX35|UBIE_BURPP Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=ubiE PE=3 SV=1
Length = 243
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 176 IACDMSNTPLNSSSVDVAVFCLSLMGINFPNY-LQEAQRVLKPSGWLLIAEVKSRFDP 232
+ CD P + DV L + + L E +RVLKP+G LL+ E +DP
Sbjct: 113 LLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDVALAEMRRVLKPAGRLLVLEFSKVWDP 170
>sp|B2JCU8|UBIE_BURP8 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=ubiE PE=3 SV=1
Length = 243
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 176 IACDMSNTPLNSSSVDVAVFCLSLMGINFPNY-LQEAQRVLKPSGWLLIAEVKSRFDP 232
+ CD P + DV L + + L E +RVLKP+G LL+ E +DP
Sbjct: 113 LLCDAEKIPFPDNYFDVVTVAFGLRNMTHKDAALAEMRRVLKPAGRLLVLEFSKVWDP 170
>sp|Q562C4|MET7B_RAT Methyltransferase-like protein 7B OS=Rattus norvegicus GN=Mettl7b
PE=1 SV=1
Length = 244
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 LNSSSVDVAVFCLSLMGINFPN-YLQEAQRVLKPSGWLLIAE 225
L SS+DV V L L + P LQE QRVLKP G L E
Sbjct: 133 LADSSMDVVVCTLVLCSVQSPRKVLQEVQRVLKPGGLLFFWE 174
>sp|Q9P272|K1456_HUMAN Putative methyltransferase KIAA1456 OS=Homo sapiens GN=KIAA1456
PE=2 SV=3
Length = 454
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 24/120 (20%)
Query: 120 QMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSV---- 175
Q WP + ++L++ P +IAD GCG + K V ++V + P V
Sbjct: 28 QSKAWPR-----VRQFLQEQKPGSLIADIGCGTGKYLK-VNSQVHTVGCDYCGPLVEIAR 81
Query: 176 ------IACDMSNTPLNSSSVDVAVFCLSLMGINFPN------YLQEAQRVLKPSGWLLI 223
+ CD N P D A+ + ++ +F ++E RVL P G L+I
Sbjct: 82 NRGCEAMVCDNLNLPFRDEGFD-AIISIGVIH-HFSTKQRRIRAIKEMARVLVPGGQLMI 139
>sp|A1R990|UBIE_ARTAT Demethylmenaquinone methyltransferase OS=Arthrobacter aurescens
(strain TC1) GN=ubiE PE=3 SV=1
Length = 253
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 138 DHSPSLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCL 197
D +V DF G ++ K + D IA D +N P +S D +
Sbjct: 71 DAGVDVVACDFSLGMLKVGKRRRP----------DIDFIAGDATNLPFADNSFDASTISF 120
Query: 198 SLMGINFPN-YLQEAQRVLKPSGWLLIAE 225
L + P L+E RV KP G L+IAE
Sbjct: 121 GLRNVVEPRKALEEMLRVTKPGGRLVIAE 149
>sp|Q9DD20|MET7B_MOUSE Methyltransferase-like protein 7B OS=Mus musculus GN=Mettl7b PE=2
SV=2
Length = 244
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 175 VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN-YLQEAQRVLKPSGWLLIAE 225
++A + L SS+DV V L L + P LQE QRVL+P G L E
Sbjct: 123 IVAYGENMKQLADSSMDVVVCTLVLCSVQSPRKVLQEVQRVLRPGGLLFFWE 174
>sp|Q6MCB5|UBIE_PARUW Demethylmenaquinone methyltransferase OS=Protochlamydia amoebophila
(strain UWE25) GN=ubiE PE=3 SV=1
Length = 242
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 145 IADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINF 204
+ DF + + + K SF + + D+ P ++ ++D A + I+
Sbjct: 81 LVDF---SSEMLACAEEKAKSFGKTPHSFQYVLADVQRLPFSNQTMDCATMAYGIRNIHH 137
Query: 205 P-NYLQEAQRVLKPSGWLLIAEV 226
P LQE RVLKP G L I E+
Sbjct: 138 PLQSLQETYRVLKPGGCLGILEL 160
>sp|A9PBH9|DRE2_POPTR Anamorsin homolog OS=Populus trichocarpa GN=POPTRDRAFT_761104 PE=2
SV=1
Length = 277
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 172 DPSVI--ACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL--QEAQRVLKPSGWLLI 223
DP +I A +S PL SSVD+ + I FP L +E RVLKP G +LI
Sbjct: 41 DPQIITQASSLSKLPLEPSSVDIVIPIFR--SIEFPGDLLVKEMFRVLKPGGTILI 94
>sp|B9RBT0|DRE2_RICCO Anamorsin homolog OS=Ricinus communis GN=RCOM_1680640 PE=3 SV=1
Length = 274
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 172 DPSVI--ACDMSNTPLNSSSVDVAV-FCLSLMGINFPNYLQEAQRVLKPSGWLLI 223
DP V+ A +S P++SSS+D+ + C SL +E RVLKP G +LI
Sbjct: 40 DPQVVTQASSLSKLPVDSSSMDIVISICRSLQ-FQGDFLFEEISRVLKPGGTVLI 93
>sp|Q21FY5|BIOHC_SACD2 Biotin biosynthesis bifunctional protein BioHC OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=bioC
PE=3 SV=1
Length = 558
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 24/123 (19%)
Query: 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVKN---KVFSFDLVSNDP------------- 173
N + +W+ + + IAD GCG ++ ++S DL
Sbjct: 324 NTLCEWVPEQAEK--IADLGCGTGYCGLQLQRPERDIYSLDLAQGMLHTARSKALAKQQL 381
Query: 174 -SVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFD 231
S + D+ P S+ D V +S+ + P EA RVLKP+G ++ S
Sbjct: 382 FSGVCADIECLPFISNGFDALVSGMSMQWCEDLPAVFSEAHRVLKPNGEMIF----STLG 437
Query: 232 PNT 234
P T
Sbjct: 438 PQT 440
>sp|A9WRT1|UBIE_RENSM Demethylmenaquinone methyltransferase OS=Renibacterium salmoninarum
(strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589
/ NCIMB 2235) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 172 DPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPN-YLQEAQRVLKPSGWLLIAE 225
D IA D + P +S D L +N P L E RV KP G L++AE
Sbjct: 95 DIDFIAGDATALPFADNSFDAVTISFGLRNVNEPKKALAEMLRVTKPGGKLVVAE 149
>sp|Q9CD86|PHMT_MYCLE Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium leprae (strain TN) GN=ML0130 PE=3 SV=1
Length = 270
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 176 IACDMSNTPLNSSSVDVAV-FCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227
+ D N P ++ S DV + S +FP +L E RVL+P G L A+++
Sbjct: 132 VRGDAENLPFDNESFDVVINIEASHCYPHFPRFLAEVVRVLRPGGHLAYADLR 184
>sp|B2IUM7|UBIE_NOSP7 Demethylmenaquinone methyltransferase OS=Nostoc punctiforme (strain
ATCC 29133 / PCC 73102) GN=ubiE PE=3 SV=1
Length = 230
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 30/144 (20%)
Query: 104 NENPALFDMYHSGYQEQMSHWPELPVNII-----VKWLKDHSPSLVIADFGCGDARLAKS 158
NE ++F+ Y +Q++ W L + I VKW S + + D CG LA
Sbjct: 3 NEVQSIFNRIAPVY-DQLNDWLSLGQHRIWKEMAVKWSAAKSGNTAL-DLCCGSGDLALR 60
Query: 159 VKNKV----------FSFDLVSN----------DPSV--IACDMSNTPLNSSSVDVAVFC 196
+ +V FS +L+ P++ + D+ N P + + D A
Sbjct: 61 LARRVGATGYVYGVDFSCNLLETAKERSQKQYPQPAIAWVEADVLNLPFDDNQFDAATMG 120
Query: 197 LSLMGI-NFPNYLQEAQRVLKPSG 219
L + + P LQE RVLKP
Sbjct: 121 YGLRNVKDIPRSLQELHRVLKPGA 144
>sp|Q3MD91|UBIE_ANAVT Demethylmenaquinone methyltransferase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=ubiE PE=3 SV=1
Length = 229
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 30/144 (20%)
Query: 104 NENPALFDMYHSGYQEQMSHWPELPVNII-----VKWLKDHSPSLVIADFGCGDA----R 154
NE A+FD Y +Q++ W L + I +KW P D CG R
Sbjct: 3 NEIRAIFDRIAPVY-DQLNDWLSLGQHRIWKEMAIKW-TGAKPGDTCLDLCCGSGDLALR 60
Query: 155 LAKSV--KNKVFSFDLVSN--------------DPSV--IACDMSNTPLNSSSVDVAVFC 196
LA+ V +V+ D +N P + + ++ + P + D A
Sbjct: 61 LARRVGSTGQVYGVDFSANLLETAKQRAQAQYPQPHISWVEANVLDLPFEDNQFDAATMG 120
Query: 197 LSLMGI-NFPNYLQEAQRVLKPSG 219
L + + P LQE +RVLKP+
Sbjct: 121 YGLRNVTDIPRSLQELRRVLKPNA 144
>sp|B7FNA9|DRE2_MEDTR Anamorsin homolog OS=Medicago truncatula PE=2 SV=1
Length = 265
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 172 DPSVI--ACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLI 223
DP VI A +S P+ SSSVD+ V + QE RVLK G LI
Sbjct: 40 DPLVITSASSLSKFPVESSSVDLVVLIWKSLDFPIDQLTQEVLRVLKAGGTTLI 93
>sp|Q9K2B6|UBIE_CHLPN Demethylmenaquinone methyltransferase OS=Chlamydia pneumoniae
GN=ubiE PE=3 SV=2
Length = 230
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 142 SLVIADFGCGDARLAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201
S+ + DF +AK L S I D++ PL + S +A L
Sbjct: 72 SVTLVDFSSAMLDIAKQ--------HLPQGSCSFIHSDINQLPLENHSYPLAAMAYGLRN 123
Query: 202 INFPN-YLQEAQRVLKPSGWLLIAEV 226
++ P+ LQE RVL PSG L I E+
Sbjct: 124 LSDPHKALQEISRVLMPSGKLGILEL 149
>sp|Q9CXI0|COQ5_MOUSE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Mus musculus GN=Coq5 PE=2 SV=2
Length = 327
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 176 IACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP 232
+ D P + S DV + + + LQEA RVLKP G L E DP
Sbjct: 196 VLGDAEELPFDDDSFDVYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFGQVNDP 253
>sp|A4G8P4|PRMA_HERAR Ribosomal protein L11 methyltransferase OS=Herminiimonas
arsenicoxydans GN=prmA PE=3 SV=1
Length = 309
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 131 IIVKWLKDHSP-SLVIADFGCGDARLAKSVK----NKVFSFDLVSNDPSVIACDMSNTPL 185
+ ++WL+ H+P L + D+GCG LA K + V D+ DP I + NT
Sbjct: 155 LCMEWLEAHAPIGLSVLDYGCGSGILAMIAKKLDADTVVGIDI---DPQAIQSAVFNTER 211
Query: 186 NSSSV 190
N V
Sbjct: 212 NHCDV 216
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 30/99 (30%)
Query: 173 PSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK----- 227
P + DMS T LNS +D F ++ + +P YL ++ V+ W++ A K
Sbjct: 144 PITVMFDMSETGLNSIDMDFVRFIINCFKVYYPKYL--SKIVIFDMPWIMNAAFKIVKSW 201
Query: 228 -----------------------SRFDPNTGGADPNKFS 243
P+ GG DP K+S
Sbjct: 202 LGPEAVSLLKFTSKNEIQEYVSVEYLPPHMGGTDPFKYS 240
>sp|P36309|POLG_ASGVP Genome polyprotein OS=Apple stem grooving virus (strain P-209) PE=4
SV=1
Length = 2105
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 175 VIACDMSNTPLNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRFD 231
V+ C N ++ + S +G +F N L+E QR+ + + W I E KS
Sbjct: 1005 VLICLDQNLFAGGANAAIVAITRSKVGFDFILKGNSLKEVQRMAQKTIWQFIIEGKSIPM 1064
Query: 232 PNTGGADPN-KFSKAVCDLGFAPVSKDFSNKMFIM 265
+P F ++ D+G + + SN +FIM
Sbjct: 1065 ERIVNMNPGASFYESPLDVGNSSIQDKASNDLFIM 1099
>sp|B0BC65|UBIE_CHLTB Demethylmenaquinone methyltransferase OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=ubiE PE=3 SV=1
Length = 229
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 174 SVIACDMSNTPLNSSSVDVAVFCLSLMGINFP-NYLQEAQRVLKPSGWLLIAEV 226
S I D+++ PL ++ +A L +++P L+E RVL+P G L I E+
Sbjct: 96 SYITSDVTHLPLPDNTFRLASMAYGLRNLSYPLEALREVYRVLQPGGHLGILEL 149
>sp|B0B800|UBIE_CHLT2 Demethylmenaquinone methyltransferase OS=Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B) GN=ubiE PE=3
SV=1
Length = 229
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 174 SVIACDMSNTPLNSSSVDVAVFCLSLMGINFP-NYLQEAQRVLKPSGWLLIAEV 226
S I D+++ PL ++ +A L +++P L+E RVL+P G L I E+
Sbjct: 96 SYITSDVTHLPLPDNTFRLASMAYGLRNLSYPLEALREVYRVLQPGGHLGILEL 149
>sp|O84435|UBIE_CHLTR Demethylmenaquinone methyltransferase OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=ubiE PE=3 SV=1
Length = 229
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 174 SVIACDMSNTPLNSSSVDVAVFCLSLMGINFP-NYLQEAQRVLKPSGWLLIAEV 226
S I D+++ PL ++ +A L +++P L+E RVL+P G L I E+
Sbjct: 96 SYITSDVTHLPLPDNTFRLASMAYGLRNLSYPLEALREVYRVLQPGGHLGILEL 149
>sp|Q3KLS2|UBIE_CHLTA Demethylmenaquinone methyltransferase OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=ubiE PE=3
SV=1
Length = 229
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 174 SVIACDMSNTPLNSSSVDVAVFCLSLMGINFP-NYLQEAQRVLKPSGWLLIAEV 226
S I D+++ PL ++ +A L +++P L+E RVL+P G L I E+
Sbjct: 96 SYITSDVTHLPLPDNTFRLASMAYGLRNLSYPLEALREVYRVLQPGGHLGILEL 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,788,114
Number of Sequences: 539616
Number of extensions: 4696720
Number of successful extensions: 18202
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 17951
Number of HSP's gapped (non-prelim): 324
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)