Query 022592
Match_columns 294
No_of_seqs 252 out of 2546
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:58:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022592.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022592hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zfu_A Nucleomethylin, cerebra 100.0 5.5E-31 1.9E-35 226.2 18.1 214 75-294 1-215 (215)
2 3dh0_A SAM dependent methyltra 99.8 1.5E-19 5.2E-24 154.8 13.9 142 130-272 27-194 (219)
3 3ou2_A SAM-dependent methyltra 99.8 1.3E-18 4.4E-23 148.4 15.7 138 128-266 33-212 (218)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 4.5E-19 1.5E-23 157.3 13.0 131 140-272 69-258 (261)
5 1vl5_A Unknown conserved prote 99.8 9.2E-19 3.1E-23 154.1 14.6 145 113-258 10-189 (260)
6 3l8d_A Methyltransferase; stru 99.8 1.8E-18 6.2E-23 150.1 15.5 117 141-257 53-198 (242)
7 3dtn_A Putative methyltransfer 99.8 1.4E-18 4.7E-23 150.4 14.3 143 130-273 33-228 (234)
8 3hnr_A Probable methyltransfer 99.8 2.6E-18 9E-23 147.1 14.8 141 129-272 34-213 (220)
9 2p7i_A Hypothetical protein; p 99.8 1.1E-18 3.8E-23 151.4 12.1 127 130-257 31-197 (250)
10 3h2b_A SAM-dependent methyltra 99.8 1.6E-18 5.5E-23 146.8 12.6 154 99-258 5-181 (203)
11 1vlm_A SAM-dependent methyltra 99.8 1.7E-17 5.6E-22 142.6 18.1 147 102-257 16-186 (219)
12 4hg2_A Methyltransferase type 99.8 1.2E-18 4E-23 154.3 9.7 87 141-227 39-137 (257)
13 3i9f_A Putative type 11 methyl 99.8 6.4E-18 2.2E-22 139.1 13.6 136 132-273 9-162 (170)
14 3dlc_A Putative S-adenosyl-L-m 99.8 8.6E-19 2.9E-23 149.3 7.8 137 130-268 34-212 (219)
15 3pfg_A N-methyltransferase; N, 99.8 5.1E-18 1.7E-22 149.6 12.7 143 132-275 40-253 (263)
16 3bkw_A MLL3908 protein, S-aden 99.7 1.6E-17 5.6E-22 144.0 14.4 128 130-258 33-213 (243)
17 3f4k_A Putative methyltransfer 99.7 1.1E-17 3.7E-22 146.6 13.3 128 129-256 34-193 (257)
18 3kkz_A Uncharacterized protein 99.7 1.6E-17 5.4E-22 146.9 14.2 129 129-257 34-194 (267)
19 3dli_A Methyltransferase; PSI- 99.7 8.4E-18 2.9E-22 146.3 11.0 127 132-258 32-183 (240)
20 3g5l_A Putative S-adenosylmeth 99.7 4.5E-18 1.5E-22 149.0 9.1 125 132-257 36-214 (253)
21 3e8s_A Putative SAM dependent 99.7 2.4E-17 8.1E-22 141.1 13.2 128 130-258 42-208 (227)
22 3e23_A Uncharacterized protein 99.7 2.8E-17 9.5E-22 140.1 12.7 125 132-257 34-180 (211)
23 1xxl_A YCGJ protein; structura 99.7 8.5E-17 2.9E-21 140.1 15.5 127 131-258 12-173 (239)
24 3vc1_A Geranyl diphosphate 2-C 99.7 2.2E-17 7.6E-22 149.5 12.1 129 130-258 106-268 (312)
25 2o57_A Putative sarcosine dime 99.7 5.4E-17 1.8E-21 145.5 14.4 130 129-258 67-233 (297)
26 3bus_A REBM, methyltransferase 99.7 6.9E-17 2.4E-21 142.9 14.8 127 131-258 52-215 (273)
27 3bxo_A N,N-dimethyltransferase 99.7 1.8E-17 6.2E-22 143.4 10.9 130 140-270 39-238 (239)
28 1y8c_A S-adenosylmethionine-de 99.7 5.8E-17 2E-21 140.5 13.7 141 130-271 25-245 (246)
29 4htf_A S-adenosylmethionine-de 99.7 4.1E-17 1.4E-21 145.5 13.0 117 141-257 68-230 (285)
30 3ege_A Putative methyltransfer 99.7 2.6E-17 9E-22 145.3 10.9 127 129-258 23-177 (261)
31 3ujc_A Phosphoethanolamine N-m 99.7 9E-17 3.1E-21 141.0 13.7 118 141-258 55-205 (266)
32 1nkv_A Hypothetical protein YJ 99.7 7.1E-17 2.4E-21 141.3 11.9 127 128-256 24-184 (256)
33 2a14_A Indolethylamine N-methy 99.7 2.4E-17 8.3E-22 145.9 8.8 132 141-272 55-261 (263)
34 1xtp_A LMAJ004091AAA; SGPP, st 99.7 3.9E-17 1.3E-21 142.7 9.5 126 132-258 85-237 (254)
35 3lcc_A Putative methyl chlorid 99.7 1.6E-16 5.3E-21 137.7 13.1 117 141-258 66-206 (235)
36 3cgg_A SAM-dependent methyltra 99.7 1E-15 3.5E-20 127.6 17.4 133 130-270 37-194 (195)
37 3ccf_A Cyclopropane-fatty-acyl 99.7 1.5E-16 5.3E-21 141.5 13.0 126 130-257 47-208 (279)
38 2ex4_A Adrenal gland protein A 99.7 8.7E-17 3E-21 140.0 10.9 117 141-257 79-223 (241)
39 3jwg_A HEN1, methyltransferase 99.7 6.4E-16 2.2E-20 132.3 15.6 141 130-271 19-210 (219)
40 2yqz_A Hypothetical protein TT 99.7 1.5E-16 5.2E-21 139.5 11.8 145 110-256 5-193 (263)
41 1pjz_A Thiopurine S-methyltran 99.7 1.1E-16 3.8E-21 136.3 9.6 116 141-257 22-174 (203)
42 3ocj_A Putative exported prote 99.7 2.2E-16 7.5E-21 142.5 12.0 131 140-271 117-304 (305)
43 3sm3_A SAM-dependent methyltra 99.7 1.3E-16 4.6E-21 137.2 9.9 117 141-257 30-205 (235)
44 3mgg_A Methyltransferase; NYSG 99.7 1.3E-16 4.5E-21 141.4 9.9 119 140-258 36-197 (276)
45 3gu3_A Methyltransferase; alph 99.7 3.2E-16 1.1E-20 140.0 11.7 129 130-259 11-190 (284)
46 3lst_A CALO1 methyltransferase 99.7 2.1E-15 7.1E-20 138.7 17.4 137 130-270 174-347 (348)
47 4fsd_A Arsenic methyltransfera 99.7 4.9E-16 1.7E-20 144.9 13.3 115 141-255 83-247 (383)
48 1ve3_A Hypothetical protein PH 99.7 6.1E-16 2.1E-20 132.6 12.3 129 141-270 38-226 (227)
49 2p35_A Trans-aconitate 2-methy 99.7 4.8E-16 1.7E-20 136.1 11.8 123 131-255 24-186 (259)
50 3cc8_A Putative methyltransfer 99.7 7.6E-16 2.6E-20 131.9 12.5 127 130-258 23-184 (230)
51 2gb4_A Thiopurine S-methyltran 99.7 9.7E-16 3.3E-20 135.1 13.3 116 141-257 68-225 (252)
52 1kpg_A CFA synthase;, cyclopro 99.7 1.3E-15 4.5E-20 135.8 14.3 115 141-258 64-227 (287)
53 2g72_A Phenylethanolamine N-me 99.6 7.1E-16 2.4E-20 137.9 11.6 128 130-257 59-254 (289)
54 3hem_A Cyclopropane-fatty-acyl 99.6 1.2E-15 4.1E-20 137.3 13.1 124 132-259 64-243 (302)
55 2xvm_A Tellurite resistance pr 99.6 1.7E-15 5.7E-20 127.2 13.1 125 130-258 22-172 (199)
56 3d2l_A SAM-dependent methyltra 99.6 1.6E-15 5.4E-20 131.4 13.3 83 141-224 33-136 (243)
57 3jwh_A HEN1; methyltransferase 99.6 2E-15 6.8E-20 129.2 13.7 126 130-256 19-189 (217)
58 3g2m_A PCZA361.24; SAM-depende 99.6 3.9E-16 1.3E-20 140.3 9.7 139 129-270 72-291 (299)
59 3p9c_A Caffeic acid O-methyltr 99.6 7E-15 2.4E-19 136.2 17.7 138 130-270 190-364 (364)
60 2gs9_A Hypothetical protein TT 99.6 5.6E-16 1.9E-20 131.8 9.3 108 141-250 36-171 (211)
61 3reo_A (ISO)eugenol O-methyltr 99.6 9.2E-15 3.1E-19 135.6 18.2 128 141-271 203-367 (368)
62 2p8j_A S-adenosylmethionine-de 99.6 1.6E-15 5.6E-20 128.5 11.9 128 128-255 10-179 (209)
63 3gwz_A MMCR; methyltransferase 99.6 1.3E-14 4.3E-19 134.6 18.4 138 130-270 192-368 (369)
64 2ip2_A Probable phenazine-spec 99.6 2.6E-14 9E-19 130.3 19.8 138 129-271 157-334 (334)
65 2r3s_A Uncharacterized protein 99.6 5.9E-15 2E-19 134.4 15.4 140 129-269 152-333 (335)
66 3thr_A Glycine N-methyltransfe 99.6 1.9E-15 6.5E-20 135.0 11.8 95 130-225 47-175 (293)
67 2i62_A Nicotinamide N-methyltr 99.6 1.4E-15 4.7E-20 133.5 10.4 132 141-272 56-262 (265)
68 3i53_A O-methyltransferase; CO 99.6 1.7E-14 5.9E-19 131.5 18.0 127 141-270 169-331 (332)
69 1ri5_A MRNA capping enzyme; me 99.6 1.7E-15 5.9E-20 135.1 10.9 118 140-257 63-248 (298)
70 3q87_B N6 adenine specific DNA 99.6 2.1E-14 7.3E-19 118.7 16.3 135 126-270 7-163 (170)
71 2kw5_A SLR1183 protein; struct 99.6 1E-15 3.5E-20 129.3 8.5 122 133-257 22-169 (202)
72 3bkx_A SAM-dependent methyltra 99.6 1E-14 3.5E-19 129.0 15.2 126 131-257 34-217 (275)
73 4e2x_A TCAB9; kijanose, tetron 99.6 2.5E-16 8.5E-21 148.1 5.0 126 132-258 99-252 (416)
74 1x19_A CRTF-related protein; m 99.6 1.9E-14 6.5E-19 132.7 16.7 139 127-270 177-358 (359)
75 2fk8_A Methoxy mycolic acid sy 99.6 5.5E-15 1.9E-19 133.8 12.4 114 141-257 90-252 (318)
76 3dp7_A SAM-dependent methyltra 99.6 2.4E-14 8.3E-19 132.4 16.9 140 132-273 171-357 (363)
77 3mcz_A O-methyltransferase; ad 99.6 3E-14 1E-18 130.8 16.7 139 131-271 169-349 (352)
78 2aot_A HMT, histamine N-methyl 99.6 2.2E-15 7.6E-20 135.1 8.5 118 141-258 52-220 (292)
79 1fp1_D Isoliquiritigenin 2'-O- 99.6 1E-14 3.4E-19 135.3 13.1 138 130-270 198-372 (372)
80 1qzz_A RDMB, aclacinomycin-10- 99.6 2.1E-14 7.2E-19 132.8 15.0 139 130-272 172-357 (374)
81 1tw3_A COMT, carminomycin 4-O- 99.6 6.1E-14 2.1E-18 129.1 17.3 141 129-272 172-357 (360)
82 2pxx_A Uncharacterized protein 99.6 2.3E-14 8E-19 121.4 13.1 131 132-272 32-199 (215)
83 3ggd_A SAM-dependent methyltra 99.6 3.2E-14 1.1E-18 123.7 14.1 123 134-258 49-218 (245)
84 4a6d_A Hydroxyindole O-methylt 99.6 6.9E-14 2.4E-18 129.0 17.0 130 141-272 179-347 (353)
85 3ofk_A Nodulation protein S; N 99.6 1.8E-14 6.1E-19 122.9 12.1 139 132-272 42-206 (216)
86 3m33_A Uncharacterized protein 99.6 2.9E-15 1E-19 129.3 6.4 105 140-258 47-166 (226)
87 3m70_A Tellurite resistance pr 99.6 3.1E-14 1.1E-18 126.8 13.2 123 131-257 111-258 (286)
88 1fp2_A Isoflavone O-methyltran 99.6 6.4E-14 2.2E-18 128.9 15.6 126 141-269 188-351 (352)
89 3g5t_A Trans-aconitate 3-methy 99.5 1.6E-14 5.4E-19 129.8 10.7 85 141-225 36-149 (299)
90 3grz_A L11 mtase, ribosomal pr 99.5 3.9E-14 1.3E-18 120.0 11.3 119 141-271 60-197 (205)
91 1wzn_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 120.1 14.3 83 141-224 41-144 (252)
92 1fbn_A MJ fibrillarin homologu 99.5 7.2E-14 2.5E-18 120.9 12.3 125 141-272 74-229 (230)
93 1dus_A MJ0882; hypothetical pr 99.5 5.3E-14 1.8E-18 117.0 11.0 130 130-270 42-193 (194)
94 3g07_A 7SK snRNA methylphospha 99.5 8.3E-15 2.8E-19 131.6 6.2 117 141-257 46-267 (292)
95 1zg3_A Isoflavanone 4'-O-methy 99.5 2.9E-13 9.8E-18 124.8 16.6 127 141-270 193-358 (358)
96 3mti_A RRNA methylase; SAM-dep 99.5 2.3E-14 7.8E-19 119.4 8.2 120 140-259 21-169 (185)
97 1nt2_A Fibrillarin-like PRE-rR 99.5 9.2E-14 3.1E-18 119.0 11.7 124 141-270 57-209 (210)
98 3orh_A Guanidinoacetate N-meth 99.5 3.3E-15 1.1E-19 130.2 2.2 116 141-256 60-207 (236)
99 3evz_A Methyltransferase; NYSG 99.5 4.8E-13 1.6E-17 115.1 15.7 127 140-273 54-222 (230)
100 1xdz_A Methyltransferase GIDB; 99.5 1.8E-13 6.1E-18 119.2 13.0 124 141-273 70-221 (240)
101 1zx0_A Guanidinoacetate N-meth 99.5 4.8E-15 1.6E-19 128.7 2.6 113 141-253 60-204 (236)
102 3mq2_A 16S rRNA methyltransfer 99.5 5.8E-14 2E-18 120.0 9.2 125 132-258 19-183 (218)
103 3e05_A Precorrin-6Y C5,15-meth 99.5 3.3E-13 1.1E-17 114.2 13.3 112 131-253 31-162 (204)
104 3lpm_A Putative methyltransfer 99.5 2.4E-13 8.3E-18 119.7 12.4 132 132-272 39-220 (259)
105 2plw_A Ribosomal RNA methyltra 99.5 4E-13 1.4E-17 113.2 12.9 107 140-255 21-175 (201)
106 3iv6_A Putative Zn-dependent a 99.5 8.8E-14 3E-18 123.0 9.3 122 103-226 7-149 (261)
107 2vdw_A Vaccinia virus capping 99.5 8.3E-14 2.8E-18 125.9 8.8 116 141-256 48-243 (302)
108 3njr_A Precorrin-6Y methylase; 99.5 5.2E-13 1.8E-17 113.7 13.3 114 132-258 47-179 (204)
109 4df3_A Fibrillarin-like rRNA/T 99.5 2.6E-13 8.8E-18 117.9 11.5 116 140-256 76-214 (233)
110 3hp7_A Hemolysin, putative; st 99.5 1.9E-13 6.5E-18 122.5 10.8 127 130-259 74-232 (291)
111 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.6E-13 8.9E-18 115.9 11.1 109 141-257 41-180 (214)
112 1ej0_A FTSJ; methyltransferase 99.4 1.4E-12 4.9E-17 106.4 13.8 115 132-255 13-157 (180)
113 4dzr_A Protein-(glutamine-N5) 99.4 8.7E-14 3E-18 117.7 6.3 134 130-272 19-206 (215)
114 2avn_A Ubiquinone/menaquinone 99.4 7.5E-13 2.6E-17 116.4 12.6 87 141-227 54-154 (260)
115 2fca_A TRNA (guanine-N(7)-)-me 99.4 2.7E-13 9.4E-18 116.1 8.9 108 141-256 38-176 (213)
116 3hm2_A Precorrin-6Y C5,15-meth 99.4 4.1E-13 1.4E-17 110.6 9.7 113 131-256 16-150 (178)
117 3htx_A HEN1; HEN1, small RNA m 99.4 2.5E-12 8.4E-17 128.2 16.9 140 130-271 711-917 (950)
118 3id6_C Fibrillarin-like rRNA/T 99.4 1.2E-12 4.1E-17 113.8 13.0 130 140-271 75-231 (232)
119 1jsx_A Glucose-inhibited divis 99.4 1.5E-12 5.1E-17 110.1 12.6 128 129-271 51-205 (207)
120 2ld4_A Anamorsin; methyltransf 99.4 7.2E-13 2.5E-17 109.5 9.8 103 140-254 11-130 (176)
121 2ipx_A RRNA 2'-O-methyltransfe 99.4 5.9E-13 2E-17 115.1 9.5 125 141-270 77-231 (233)
122 2qe6_A Uncharacterized protein 99.4 1.4E-12 4.8E-17 116.2 12.1 124 130-255 66-238 (274)
123 1l3i_A Precorrin-6Y methyltran 99.4 9E-13 3.1E-17 109.3 10.2 113 131-255 24-156 (192)
124 2nxc_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.9E-17 115.3 11.3 119 140-270 119-254 (254)
125 3opn_A Putative hemolysin; str 99.4 1.2E-13 4E-18 120.3 4.7 127 129-258 25-183 (232)
126 3dou_A Ribosomal RNA large sub 99.4 3.5E-12 1.2E-16 107.5 13.3 107 140-255 24-160 (191)
127 2b3t_A Protein methyltransfera 99.4 2.4E-12 8.2E-17 114.3 12.5 105 141-255 109-259 (276)
128 3p2e_A 16S rRNA methylase; met 99.4 1.1E-12 3.8E-17 113.4 9.8 118 141-258 24-184 (225)
129 1g8a_A Fibrillarin-like PRE-rR 99.4 4E-12 1.4E-16 109.3 13.0 125 141-270 73-226 (227)
130 2yxd_A Probable cobalt-precorr 99.4 1.9E-12 6.4E-17 106.7 10.5 112 130-256 25-154 (183)
131 3eey_A Putative rRNA methylase 99.4 5.4E-13 1.9E-17 112.1 7.1 117 141-260 22-174 (197)
132 3g89_A Ribosomal RNA small sub 99.4 9.2E-13 3.2E-17 115.7 8.8 123 141-272 80-230 (249)
133 3p9n_A Possible methyltransfer 99.4 1.3E-12 4.6E-17 109.2 9.3 88 141-228 44-156 (189)
134 3uwp_A Histone-lysine N-methyl 99.4 2.8E-13 9.4E-18 126.2 5.4 97 129-226 162-289 (438)
135 2frn_A Hypothetical protein PH 99.4 7.4E-12 2.5E-16 111.6 13.5 109 141-255 125-253 (278)
136 3fpf_A Mtnas, putative unchara 99.4 2.9E-12 9.9E-17 114.9 10.6 86 138-227 119-224 (298)
137 3sso_A Methyltransferase; macr 99.4 1E-12 3.6E-17 122.0 7.8 121 105-228 179-327 (419)
138 3lec_A NADB-rossmann superfami 99.4 7.8E-12 2.7E-16 108.3 12.8 121 140-271 20-164 (230)
139 3bgv_A MRNA CAP guanine-N7 met 99.3 1.6E-12 5.4E-17 117.5 7.9 125 132-256 24-229 (313)
140 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.8E-12 2E-16 110.0 11.0 114 130-256 86-221 (258)
141 2bm8_A Cephalosporin hydroxyla 99.3 2.7E-12 9.1E-17 111.8 8.6 108 141-254 81-214 (236)
142 1yb2_A Hypothetical protein TA 99.3 2.5E-12 8.5E-17 114.3 8.2 111 132-256 102-234 (275)
143 2ozv_A Hypothetical protein AT 99.3 1.6E-11 5.5E-16 108.3 13.0 123 140-272 35-213 (260)
144 3kr9_A SAM-dependent methyltra 99.3 1.9E-11 6.5E-16 105.6 12.6 120 140-271 14-158 (225)
145 3fzg_A 16S rRNA methylase; met 99.3 1.7E-12 5.8E-17 108.8 5.7 125 141-266 49-195 (200)
146 3gnl_A Uncharacterized protein 99.3 1.4E-11 4.9E-16 107.5 11.8 122 140-272 20-165 (244)
147 3lbf_A Protein-L-isoaspartate 99.3 5.1E-12 1.7E-16 107.2 8.6 91 129-225 66-174 (210)
148 3q7e_A Protein arginine N-meth 99.3 5.5E-12 1.9E-16 116.1 9.4 83 141-223 66-171 (349)
149 3dmg_A Probable ribosomal RNA 99.3 6.9E-12 2.4E-16 116.8 9.7 85 141-225 233-340 (381)
150 2nyu_A Putative ribosomal RNA 99.3 7.9E-12 2.7E-16 104.6 9.2 107 140-255 21-166 (196)
151 3ckk_A TRNA (guanine-N(7)-)-me 99.3 4.5E-12 1.5E-16 110.4 7.7 85 141-225 46-168 (235)
152 1p91_A Ribosomal RNA large sub 99.3 5.1E-12 1.8E-16 111.3 8.1 82 141-228 85-181 (269)
153 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.9E-12 6.7E-17 111.4 5.0 85 141-225 34-150 (218)
154 2fyt_A Protein arginine N-meth 99.3 1.1E-11 3.8E-16 113.7 10.2 83 140-222 63-168 (340)
155 1af7_A Chemotaxis receptor met 99.3 2E-11 6.7E-16 108.7 11.0 84 141-224 105-251 (274)
156 3mb5_A SAM-dependent methyltra 99.3 9.6E-12 3.3E-16 108.7 8.8 114 130-257 83-220 (255)
157 3r0q_C Probable protein argini 99.3 8E-12 2.7E-16 116.1 8.6 85 140-225 62-169 (376)
158 3r3h_A O-methyltransferase, SA 99.3 3E-11 1E-15 105.5 11.3 96 130-227 49-172 (242)
159 2oxt_A Nucleoside-2'-O-methylt 99.3 2E-11 6.9E-16 108.2 10.2 85 140-227 73-187 (265)
160 2fhp_A Methylase, putative; al 99.3 4.8E-12 1.7E-16 104.9 5.7 99 130-228 33-157 (187)
161 2esr_A Methyltransferase; stru 99.2 3.5E-12 1.2E-16 105.2 4.4 99 130-228 20-141 (177)
162 3bwc_A Spermidine synthase; SA 99.2 1E-11 3.5E-16 112.1 7.6 127 141-271 95-258 (304)
163 2ift_A Putative methylase HI07 99.2 4.3E-12 1.5E-16 107.6 4.7 98 132-229 44-167 (201)
164 1g6q_1 HnRNP arginine N-methyl 99.2 3E-11 1E-15 110.1 10.6 83 141-223 38-143 (328)
165 2wa2_A Non-structural protein 99.2 2.2E-11 7.7E-16 108.5 9.5 85 140-227 81-195 (276)
166 2y1w_A Histone-arginine methyl 99.2 3.2E-11 1.1E-15 110.9 10.6 91 132-224 42-154 (348)
167 3gdh_A Trimethylguanosine synt 99.2 3.2E-13 1.1E-17 117.2 -2.7 132 130-263 67-223 (241)
168 3giw_A Protein of unknown func 99.2 2.9E-11 1E-15 107.2 9.8 124 130-255 67-243 (277)
169 1vbf_A 231AA long hypothetical 99.2 2.2E-11 7.5E-16 104.7 8.8 91 130-226 60-166 (231)
170 2fpo_A Methylase YHHF; structu 99.2 7.9E-12 2.7E-16 106.0 5.9 88 141-228 54-163 (202)
171 4hc4_A Protein arginine N-meth 99.2 5.1E-11 1.8E-15 110.5 11.3 82 141-223 83-187 (376)
172 1dl5_A Protein-L-isoaspartate 99.2 2.6E-11 8.9E-16 109.9 8.9 91 129-225 64-175 (317)
173 3ntv_A MW1564 protein; rossman 99.2 3.7E-11 1.3E-15 103.9 8.9 84 141-226 71-177 (232)
174 3bzb_A Uncharacterized protein 99.2 1.5E-10 5.1E-15 103.2 12.6 115 141-258 79-236 (281)
175 1ixk_A Methyltransferase; open 99.2 6.1E-11 2.1E-15 107.6 10.0 120 132-256 109-272 (315)
176 2gpy_A O-methyltransferase; st 99.2 6.8E-11 2.3E-15 102.0 9.8 84 141-226 54-161 (233)
177 3tma_A Methyltransferase; thum 99.2 1.7E-10 5.8E-15 106.1 12.7 119 140-270 202-353 (354)
178 3u81_A Catechol O-methyltransf 99.2 6.8E-11 2.3E-15 101.3 9.4 116 131-255 48-193 (221)
179 1o54_A SAM-dependent O-methylt 99.2 4E-11 1.4E-15 106.4 8.1 113 130-256 102-236 (277)
180 2yxe_A Protein-L-isoaspartate 99.2 6.1E-11 2.1E-15 100.8 8.8 90 130-225 67-177 (215)
181 2xyq_A Putative 2'-O-methyl tr 99.2 1.6E-10 5.5E-15 103.5 11.5 109 140-257 62-195 (290)
182 2b25_A Hypothetical protein; s 99.2 2E-10 6.7E-15 104.8 12.2 91 130-225 95-219 (336)
183 3duw_A OMT, O-methyltransferas 99.2 4.2E-10 1.4E-14 96.2 13.5 97 129-227 46-169 (223)
184 2h00_A Methyltransferase 10 do 99.2 2E-11 7E-16 106.7 5.2 115 141-255 65-234 (254)
185 4dcm_A Ribosomal RNA large sub 99.2 5.1E-11 1.8E-15 110.7 8.0 93 131-225 213-334 (375)
186 1i9g_A Hypothetical protein RV 99.2 3.9E-11 1.3E-15 106.2 6.9 113 130-255 89-226 (280)
187 3tfw_A Putative O-methyltransf 99.1 1.5E-10 5.2E-15 101.2 10.2 97 129-227 51-172 (248)
188 1ws6_A Methyltransferase; stru 99.1 2.9E-11 9.8E-16 98.6 4.9 96 132-228 31-150 (171)
189 1u2z_A Histone-lysine N-methyl 99.1 7.8E-11 2.7E-15 111.1 8.4 96 129-225 231-359 (433)
190 2p41_A Type II methyltransfera 99.1 2E-10 6.7E-15 103.8 10.7 84 140-225 81-191 (305)
191 3c3p_A Methyltransferase; NP_9 99.1 1.2E-10 4.3E-15 98.7 8.6 95 129-226 44-161 (210)
192 3tr6_A O-methyltransferase; ce 99.1 3.8E-11 1.3E-15 102.8 5.3 96 130-227 53-176 (225)
193 3a27_A TYW2, uncharacterized p 99.1 1.8E-10 6.2E-15 102.3 9.8 85 140-228 118-222 (272)
194 2pjd_A Ribosomal RNA small sub 99.1 6.3E-11 2.2E-15 108.6 6.1 95 129-226 185-304 (343)
195 3dr5_A Putative O-methyltransf 99.1 1.8E-10 6.3E-15 99.1 8.6 96 129-226 41-164 (221)
196 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.1E-15 100.5 8.5 84 141-224 49-172 (246)
197 3tm4_A TRNA (guanine N2-)-meth 99.1 5.2E-10 1.8E-14 103.7 11.9 110 131-255 209-348 (373)
198 3frh_A 16S rRNA methylase; met 99.1 3.8E-10 1.3E-14 97.8 10.1 125 140-266 104-249 (253)
199 2yxl_A PH0851 protein, 450AA l 99.1 6.7E-10 2.3E-14 105.5 12.7 119 132-255 250-415 (450)
200 1r18_A Protein-L-isoaspartate( 99.1 2.5E-10 8.6E-15 98.1 8.7 90 130-225 72-194 (227)
201 1jg1_A PIMT;, protein-L-isoasp 99.1 2.2E-10 7.4E-15 99.1 8.3 90 129-225 80-189 (235)
202 1o9g_A RRNA methyltransferase; 99.1 1.5E-10 5.1E-15 101.1 7.3 85 141-225 51-214 (250)
203 2pbf_A Protein-L-isoaspartate 99.1 2E-10 6.7E-15 98.5 7.9 91 131-226 69-194 (227)
204 1i1n_A Protein-L-isoaspartate 99.1 2.5E-10 8.6E-15 97.8 8.2 90 131-225 66-182 (226)
205 2igt_A SAM dependent methyltra 99.1 3.7E-10 1.3E-14 103.2 9.6 117 132-254 144-299 (332)
206 1nv8_A HEMK protein; class I a 99.1 7.8E-10 2.7E-14 98.8 11.2 120 132-266 115-278 (284)
207 3adn_A Spermidine synthase; am 99.1 1.4E-09 4.8E-14 97.7 12.7 126 141-271 83-245 (294)
208 3lcv_B Sisomicin-gentamicin re 99.0 3.8E-10 1.3E-14 98.8 7.9 124 141-266 132-279 (281)
209 1ne2_A Hypothetical protein TA 99.0 1.6E-09 5.3E-14 91.1 11.5 99 141-255 51-166 (200)
210 1sui_A Caffeoyl-COA O-methyltr 99.0 3.1E-10 1.1E-14 99.3 7.3 95 130-226 68-191 (247)
211 2qm3_A Predicted methyltransfe 99.0 8.5E-10 2.9E-14 102.3 10.5 108 141-255 172-305 (373)
212 2yvl_A TRMI protein, hypotheti 99.0 9.1E-10 3.1E-14 95.3 10.0 111 131-255 82-211 (248)
213 3b3j_A Histone-arginine methyl 99.0 1.6E-10 5.3E-15 110.7 5.5 82 141-223 158-261 (480)
214 3ajd_A Putative methyltransfer 99.0 6.8E-10 2.3E-14 98.6 8.8 111 140-255 82-237 (274)
215 4azs_A Methyltransferase WBDD; 99.0 5.1E-11 1.7E-15 116.5 1.0 87 141-227 66-175 (569)
216 3cbg_A O-methyltransferase; cy 99.0 3.3E-10 1.1E-14 98.0 5.5 96 130-227 61-184 (232)
217 2avd_A Catechol-O-methyltransf 99.0 1.1E-09 3.8E-14 93.8 8.7 95 131-227 59-181 (229)
218 2f8l_A Hypothetical protein LM 99.0 4.3E-09 1.5E-13 96.4 12.9 127 141-272 130-306 (344)
219 2ih2_A Modification methylase 99.0 3.3E-09 1.1E-13 99.3 12.4 139 127-271 26-211 (421)
220 3k6r_A Putative transferase PH 99.0 5.6E-09 1.9E-13 92.9 12.8 110 140-255 124-253 (278)
221 1iy9_A Spermidine synthase; ro 99.0 1.6E-09 5.4E-14 96.4 9.0 126 141-271 75-236 (275)
222 2hnk_A SAM-dependent O-methylt 99.0 7.8E-10 2.7E-14 95.8 6.8 93 132-226 51-182 (239)
223 1wy7_A Hypothetical protein PH 99.0 8E-09 2.7E-13 87.0 12.6 103 141-256 49-172 (207)
224 1inl_A Spermidine synthase; be 98.9 2.2E-09 7.5E-14 96.5 9.3 126 141-271 90-252 (296)
225 1sqg_A SUN protein, FMU protei 98.9 5.2E-09 1.8E-13 98.8 12.1 117 132-254 238-399 (429)
226 2yx1_A Hypothetical protein MJ 98.9 5.4E-09 1.8E-13 95.6 11.5 99 141-255 195-313 (336)
227 2pt6_A Spermidine synthase; tr 98.9 5.4E-09 1.8E-13 95.0 11.1 126 141-271 116-277 (321)
228 1uir_A Polyamine aminopropyltr 98.9 2.7E-09 9.2E-14 96.7 9.0 126 141-271 77-242 (314)
229 3gjy_A Spermidine synthase; AP 98.9 2.6E-09 8.7E-14 96.7 6.9 123 143-271 91-247 (317)
230 3m4x_A NOL1/NOP2/SUN family pr 98.9 2.4E-09 8.2E-14 101.7 6.9 111 140-255 104-259 (456)
231 2cmg_A Spermidine synthase; tr 98.9 1.2E-08 4E-13 90.2 10.9 119 141-271 72-216 (262)
232 2frx_A Hypothetical protein YE 98.9 7.7E-09 2.6E-13 98.9 10.4 105 141-250 117-266 (479)
233 3c3y_A Pfomt, O-methyltransfer 98.9 1.2E-09 4.2E-14 94.8 4.4 95 130-226 59-182 (237)
234 1xj5_A Spermidine synthase 1; 98.9 2.1E-09 7.2E-14 98.2 5.8 84 141-224 120-234 (334)
235 1zq9_A Probable dimethyladenos 98.8 2.3E-09 7.9E-14 95.8 5.8 92 128-222 16-144 (285)
236 3m6w_A RRNA methylase; rRNA me 98.8 4E-09 1.4E-13 100.3 7.4 111 140-255 100-255 (464)
237 3v97_A Ribosomal RNA large sub 98.8 5.2E-09 1.8E-13 104.6 7.9 106 141-255 539-678 (703)
238 1uwv_A 23S rRNA (uracil-5-)-me 98.8 2.6E-08 8.8E-13 94.1 11.2 111 132-255 278-410 (433)
239 2o07_A Spermidine synthase; st 98.8 3.2E-09 1.1E-13 95.7 4.7 86 141-226 95-210 (304)
240 2i7c_A Spermidine synthase; tr 98.8 4.1E-09 1.4E-13 94.1 5.2 110 141-255 78-217 (283)
241 1wxx_A TT1595, hypothetical pr 98.8 3.9E-09 1.3E-13 98.1 5.2 115 135-253 204-350 (382)
242 2b78_A Hypothetical protein SM 98.8 4.1E-09 1.4E-13 98.1 4.9 105 141-252 212-355 (385)
243 1mjf_A Spermidine synthase; sp 98.8 1.9E-08 6.6E-13 89.5 9.0 125 141-271 75-239 (281)
244 2b2c_A Spermidine synthase; be 98.8 3.9E-09 1.3E-13 95.7 4.2 85 141-225 108-222 (314)
245 2as0_A Hypothetical protein PH 98.7 7.4E-09 2.5E-13 96.6 5.6 89 141-229 217-339 (396)
246 3b5i_A S-adenosyl-L-methionine 98.7 9.3E-08 3.2E-12 88.4 12.7 117 142-258 53-297 (374)
247 1yub_A Ermam, rRNA methyltrans 98.7 1.8E-09 6.2E-14 94.1 0.9 95 128-224 17-144 (245)
248 4dmg_A Putative uncharacterize 98.7 4.1E-08 1.4E-12 91.6 9.6 107 141-254 214-352 (393)
249 3c0k_A UPF0064 protein YCCW; P 98.7 1.4E-08 4.7E-13 94.8 6.1 111 141-254 220-365 (396)
250 2h1r_A Dimethyladenosine trans 98.7 2.6E-08 9.1E-13 89.5 7.1 70 129-201 31-118 (299)
251 2okc_A Type I restriction enzy 98.7 4.6E-08 1.6E-12 92.7 8.6 143 125-272 156-358 (445)
252 3gru_A Dimethyladenosine trans 98.6 5.5E-08 1.9E-12 87.3 7.8 74 127-201 37-126 (295)
253 3evf_A RNA-directed RNA polyme 98.6 1.2E-07 4.2E-12 83.3 8.7 87 140-226 73-185 (277)
254 4gqb_A Protein arginine N-meth 98.6 1.5E-07 5E-12 92.4 9.5 117 95-223 319-465 (637)
255 2jjq_A Uncharacterized RNA met 98.6 5.7E-07 2E-11 84.7 12.8 99 141-255 290-405 (425)
256 2efj_A 3,7-dimethylxanthine me 98.6 5.4E-07 1.9E-11 83.5 12.3 116 142-257 53-290 (384)
257 3ua3_A Protein arginine N-meth 98.5 1.8E-07 6.1E-12 92.1 7.6 117 96-223 375-532 (745)
258 1qam_A ERMC' methyltransferase 98.5 8.5E-08 2.9E-12 83.6 4.8 68 130-199 20-104 (244)
259 2ar0_A M.ecoki, type I restric 98.5 1.8E-07 6.2E-12 90.7 7.2 142 127-272 156-363 (541)
260 1m6e_X S-adenosyl-L-methionnin 98.4 2.4E-06 8.1E-11 78.5 12.0 116 142-257 52-278 (359)
261 3fut_A Dimethyladenosine trans 98.3 5.6E-07 1.9E-11 79.7 6.4 72 128-201 35-122 (271)
262 4auk_A Ribosomal RNA large sub 98.3 1.7E-06 5.8E-11 79.4 9.5 111 140-253 210-334 (375)
263 3tqs_A Ribosomal RNA small sub 98.3 6.8E-07 2.3E-11 78.5 6.6 69 128-198 17-105 (255)
264 2qy6_A UPF0209 protein YFCK; s 98.3 7E-07 2.4E-11 78.5 6.7 119 141-271 60-247 (257)
265 2k4m_A TR8_protein, UPF0146 pr 98.3 1.3E-06 4.5E-11 69.6 7.1 97 130-230 23-126 (153)
266 2b9e_A NOL1/NOP2/SUN domain fa 98.3 2.5E-06 8.5E-11 77.0 9.9 109 140-254 101-260 (309)
267 3gcz_A Polyprotein; flavivirus 98.3 1.9E-06 6.6E-11 75.9 8.6 88 140-227 89-203 (282)
268 3k0b_A Predicted N6-adenine-sp 98.3 1.5E-06 5.2E-11 81.0 8.4 85 140-225 200-350 (393)
269 3khk_A Type I restriction-modi 98.3 1.4E-06 4.9E-11 84.4 8.0 144 125-272 230-447 (544)
270 3ldu_A Putative methylase; str 98.3 1.1E-06 3.8E-11 81.7 6.8 85 140-225 194-344 (385)
271 3ldg_A Putative uncharacterize 98.2 2.6E-06 8.8E-11 79.1 8.6 85 140-225 193-343 (384)
272 3bt7_A TRNA (uracil-5-)-methyl 98.2 1E-06 3.5E-11 81.3 5.2 80 142-226 214-327 (369)
273 2qfm_A Spermine synthase; sper 98.2 1.2E-06 4.2E-11 80.3 4.9 85 141-225 188-314 (364)
274 3eld_A Methyltransferase; flav 98.2 1.7E-05 5.6E-10 70.4 11.7 95 131-227 72-193 (300)
275 3ftd_A Dimethyladenosine trans 98.1 6.3E-06 2.2E-10 72.0 8.4 70 128-198 19-104 (249)
276 2r6z_A UPF0341 protein in RSP 98.1 5.9E-07 2E-11 79.0 0.8 61 141-201 83-173 (258)
277 3lkd_A Type I restriction-modi 98.1 1.5E-05 5E-10 77.3 10.2 144 125-271 202-408 (542)
278 3axs_A Probable N(2),N(2)-dime 98.0 2.2E-06 7.6E-11 79.7 3.4 82 141-225 52-158 (392)
279 3uzu_A Ribosomal RNA small sub 98.0 6E-06 2E-10 73.4 5.4 58 129-187 31-106 (279)
280 2oyr_A UPF0341 protein YHIQ; a 98.0 2.3E-06 7.9E-11 75.2 2.5 89 130-219 76-194 (258)
281 1qyr_A KSGA, high level kasuga 98.0 2.6E-06 9E-11 74.6 2.6 70 129-200 10-101 (252)
282 2dul_A N(2),N(2)-dimethylguano 97.9 2.7E-06 9.2E-11 78.9 2.5 81 141-224 47-163 (378)
283 3p8z_A Mtase, non-structural p 97.9 5.7E-05 1.9E-09 64.8 9.7 82 140-224 77-185 (267)
284 1m6y_A S-adenosyl-methyltransf 97.9 5.9E-06 2E-10 74.2 3.7 69 129-198 15-107 (301)
285 2px2_A Genome polyprotein [con 97.9 0.0002 6.9E-09 62.2 12.5 86 140-227 72-185 (269)
286 3lkz_A Non-structural protein 97.8 0.00014 4.8E-09 64.3 11.4 82 140-224 93-203 (321)
287 3o4f_A Spermidine synthase; am 97.8 4.3E-05 1.5E-09 68.2 8.3 126 141-271 83-245 (294)
288 3v97_A Ribosomal RNA large sub 97.8 4.8E-05 1.6E-09 75.9 8.1 84 141-224 190-346 (703)
289 3s1s_A Restriction endonucleas 97.5 0.0002 6.9E-09 71.7 8.9 108 141-250 321-488 (878)
290 2wk1_A NOVP; transferase, O-me 97.5 0.0003 1E-08 62.4 8.4 117 132-255 97-268 (282)
291 3r24_A NSP16, 2'-O-methyl tran 97.5 0.0022 7.4E-08 56.8 13.1 115 130-255 94-237 (344)
292 3ll7_A Putative methyltransfer 97.3 5.6E-05 1.9E-09 70.6 1.9 59 141-199 93-173 (410)
293 3vyw_A MNMC2; tRNA wobble urid 97.3 0.00056 1.9E-08 61.2 8.3 118 141-270 96-259 (308)
294 3cvo_A Methyltransferase-like 97.3 0.00075 2.6E-08 56.8 8.6 79 141-225 30-154 (202)
295 4fzv_A Putative methyltransfer 97.3 0.00041 1.4E-08 63.6 6.9 95 132-226 139-285 (359)
296 2vz8_A Fatty acid synthase; tr 97.2 9.7E-05 3.3E-09 83.0 2.2 125 132-256 1229-1392(2512)
297 3ufb_A Type I restriction-modi 97.2 0.0011 3.9E-08 63.8 9.5 122 125-250 202-384 (530)
298 3c6k_A Spermine synthase; sper 96.9 0.00067 2.3E-08 62.4 4.0 105 141-250 205-351 (381)
299 1wg8_A Predicted S-adenosylmet 96.7 0.0021 7E-08 56.8 5.5 69 129-198 11-98 (285)
300 2zig_A TTHA0409, putative modi 95.6 0.008 2.7E-07 53.3 3.8 41 129-171 225-268 (297)
301 3g7u_A Cytosine-specific methy 94.8 0.068 2.3E-06 49.1 7.5 108 143-253 3-145 (376)
302 1rjd_A PPM1P, carboxy methyl t 94.4 0.21 7.2E-06 45.0 9.8 111 141-252 97-281 (334)
303 3ubt_Y Modification methylase 94.2 0.45 1.5E-05 42.2 11.6 111 143-255 1-139 (331)
304 2c7p_A Modification methylase 94.1 0.17 5.9E-06 45.4 8.6 112 142-255 11-149 (327)
305 3tos_A CALS11; methyltransfera 94.1 0.065 2.2E-06 46.6 5.4 71 187-262 180-250 (257)
306 1boo_A Protein (N-4 cytosine-s 94.0 0.04 1.4E-06 49.5 4.0 84 171-255 13-116 (323)
307 3tka_A Ribosomal RNA small sub 93.8 0.034 1.2E-06 50.3 3.2 70 129-199 46-138 (347)
308 1g55_A DNA cytosine methyltran 93.7 0.21 7.3E-06 45.1 8.5 108 143-255 3-145 (343)
309 2zig_A TTHA0409, putative modi 93.6 0.08 2.7E-06 46.8 5.3 84 172-255 21-132 (297)
310 1g60_A Adenine-specific methyl 92.6 0.092 3.2E-06 45.4 4.1 42 127-170 200-244 (260)
311 1i4w_A Mitochondrial replicati 92.3 0.14 5E-06 46.5 5.1 56 128-183 40-117 (353)
312 3pvc_A TRNA 5-methylaminomethy 91.8 0.52 1.8E-05 46.4 8.9 60 187-258 169-232 (689)
313 3ps9_A TRNA 5-methylaminomethy 91.7 0.53 1.8E-05 46.3 8.7 72 187-270 177-252 (676)
314 3qv2_A 5-cytosine DNA methyltr 91.6 0.96 3.3E-05 40.5 9.6 111 142-256 10-157 (327)
315 2dph_A Formaldehyde dismutase; 91.4 0.29 9.9E-06 44.8 6.2 85 140-226 184-300 (398)
316 2oo3_A Protein involved in cat 90.0 0.22 7.6E-06 43.7 3.8 116 131-253 82-220 (283)
317 4h0n_A DNMT2; SAH binding, tra 89.8 2.8 9.5E-05 37.5 11.0 109 143-256 4-146 (333)
318 3me5_A Cytosine-specific methy 88.3 0.63 2.2E-05 44.0 5.9 111 142-254 88-255 (482)
319 3iht_A S-adenosyl-L-methionine 88.2 0.61 2.1E-05 37.2 4.7 91 132-224 33-146 (174)
320 1f8f_A Benzyl alcohol dehydrog 87.9 0.94 3.2E-05 40.9 6.6 82 140-226 189-290 (371)
321 1g60_A Adenine-specific methyl 87.9 0.76 2.6E-05 39.5 5.7 73 174-255 6-95 (260)
322 1kol_A Formaldehyde dehydrogen 87.4 0.86 2.9E-05 41.5 6.0 85 140-226 184-301 (398)
323 3two_A Mannitol dehydrogenase; 87.1 0.72 2.5E-05 41.2 5.3 79 140-226 175-266 (348)
324 1eg2_A Modification methylase 87.1 1.5 5.2E-05 39.0 7.4 78 177-255 44-136 (319)
325 1pl8_A Human sorbitol dehydrog 86.3 0.44 1.5E-05 42.8 3.4 81 140-226 170-274 (356)
326 1pqw_A Polyketide synthase; ro 86.1 1.2 4.2E-05 36.0 5.8 80 140-226 37-138 (198)
327 2uyo_A Hypothetical protein ML 84.0 6 0.00021 34.9 9.7 83 143-226 104-219 (310)
328 3gms_A Putative NADPH:quinone 83.2 2.5 8.5E-05 37.5 6.9 81 140-226 143-244 (340)
329 3goh_A Alcohol dehydrogenase, 83.1 1.4 4.8E-05 38.6 5.1 75 140-224 141-228 (315)
330 4dcm_A Ribosomal RNA large sub 81.3 16 0.00054 33.0 11.7 117 132-259 29-161 (375)
331 4ej6_A Putative zinc-binding d 81.3 1.7 5.8E-05 39.2 5.1 81 140-226 181-285 (370)
332 4b7c_A Probable oxidoreductase 81.3 0.63 2.2E-05 41.3 2.1 81 140-226 148-249 (336)
333 3uog_A Alcohol dehydrogenase; 81.2 1.6 5.6E-05 39.1 4.9 81 140-226 188-288 (363)
334 3s2e_A Zinc-containing alcohol 81.0 0.76 2.6E-05 40.9 2.6 80 140-225 165-263 (340)
335 3iei_A Leucine carboxyl methyl 80.3 31 0.0011 30.6 13.7 121 134-255 83-277 (334)
336 1v3u_A Leukotriene B4 12- hydr 78.9 2 6.7E-05 38.0 4.6 80 140-226 144-245 (333)
337 1e3j_A NADP(H)-dependent ketos 78.9 6.3 0.00022 35.0 8.0 81 140-226 167-272 (352)
338 3fpc_A NADP-dependent alcohol 78.6 2.1 7.3E-05 38.1 4.8 81 140-225 165-266 (352)
339 2km1_A Protein DRE2; yeast, an 78.2 2 6.9E-05 33.3 3.8 41 183-223 53-96 (136)
340 1cdo_A Alcohol dehydrogenase; 78.2 1.8 6.2E-05 39.0 4.2 82 140-226 191-295 (374)
341 3uko_A Alcohol dehydrogenase c 77.6 6.5 0.00022 35.3 7.8 82 140-226 192-296 (378)
342 1boo_A Protein (N-4 cytosine-s 77.2 2.3 7.8E-05 37.8 4.5 43 127-171 240-285 (323)
343 2hwk_A Helicase NSP2; rossman 77.1 13 0.00045 32.6 9.0 102 162-272 180-300 (320)
344 3mag_A VP39; methylated adenin 76.7 23 0.00079 31.0 10.5 75 141-230 60-143 (307)
345 1jdq_A TM006 protein, hypothet 76.5 18 0.00063 26.0 8.5 69 191-267 26-95 (98)
346 1p0f_A NADP-dependent alcohol 76.4 2.3 7.7E-05 38.3 4.3 81 140-225 190-293 (373)
347 3swr_A DNA (cytosine-5)-methyl 76.2 8 0.00027 39.9 8.7 112 142-255 540-698 (1002)
348 2b5w_A Glucose dehydrogenase; 76.1 8.3 0.00028 34.3 8.0 77 143-226 174-274 (357)
349 2fzw_A Alcohol dehydrogenase c 76.0 2.1 7.3E-05 38.4 4.0 81 140-225 189-292 (373)
350 2jhf_A Alcohol dehydrogenase E 75.9 2.3 7.9E-05 38.3 4.2 81 140-225 190-293 (374)
351 1rjw_A ADH-HT, alcohol dehydro 75.7 1.9 6.5E-05 38.3 3.5 81 140-225 163-261 (339)
352 3lvj_C Sulfurtransferase TUSA; 75.3 18 0.0006 25.0 8.9 70 190-267 9-78 (82)
353 1e3i_A Alcohol dehydrogenase, 75.0 2.5 8.5E-05 38.1 4.2 81 140-225 194-297 (376)
354 1uuf_A YAHK, zinc-type alcohol 74.8 1.3 4.4E-05 40.1 2.2 80 140-225 193-288 (369)
355 2dq4_A L-threonine 3-dehydroge 73.7 1 3.4E-05 40.2 1.2 80 141-225 164-262 (343)
356 3m6i_A L-arabinitol 4-dehydrog 73.7 12 0.00039 33.3 8.3 82 140-226 178-284 (363)
357 2py6_A Methyltransferase FKBM; 73.6 2.2 7.4E-05 39.3 3.4 31 140-170 225-262 (409)
358 4eye_A Probable oxidoreductase 73.4 4.1 0.00014 36.1 5.2 79 140-225 158-257 (342)
359 1eg2_A Modification methylase 73.4 3.3 0.00011 36.8 4.5 31 140-170 241-274 (319)
360 2hcy_A Alcohol dehydrogenase 1 73.2 1.6 5.5E-05 38.9 2.4 81 140-225 168-269 (347)
361 3jv7_A ADH-A; dehydrogenase, n 72.4 5 0.00017 35.5 5.5 83 139-226 169-271 (345)
362 2d8a_A PH0655, probable L-thre 72.2 6.1 0.00021 35.0 6.0 79 141-225 167-267 (348)
363 3ius_A Uncharacterized conserv 71.2 30 0.001 29.0 10.1 55 143-201 6-75 (286)
364 1yb5_A Quinone oxidoreductase; 70.6 7.9 0.00027 34.4 6.4 79 140-225 169-269 (351)
365 3jyn_A Quinone oxidoreductase; 70.6 5 0.00017 35.2 5.0 81 140-226 139-240 (325)
366 3qwb_A Probable quinone oxidor 69.4 6.3 0.00022 34.6 5.4 80 140-225 147-247 (334)
367 3fwz_A Inner membrane protein 69.1 25 0.00086 26.4 8.3 98 143-254 8-122 (140)
368 2c0c_A Zinc binding alcohol de 68.8 8.8 0.0003 34.3 6.3 81 139-226 161-262 (362)
369 1ej6_A Lambda2; icosahedral, n 68.7 8 0.00027 39.9 6.3 79 141-219 821-918 (1289)
370 2j3h_A NADP-dependent oxidored 68.1 6.1 0.00021 34.8 5.1 80 140-226 154-256 (345)
371 3dmg_A Probable ribosomal RNA 67.9 9.2 0.00031 34.7 6.3 120 123-254 29-161 (381)
372 3nx4_A Putative oxidoreductase 66.0 11 0.00037 32.8 6.2 76 144-225 149-241 (324)
373 2zwa_A Leucine carboxyl methyl 65.7 26 0.0009 34.2 9.5 82 172-255 189-305 (695)
374 1piw_A Hypothetical zinc-type 65.7 1.9 6.4E-05 38.7 1.1 82 140-225 178-276 (360)
375 3ip1_A Alcohol dehydrogenase, 65.7 13 0.00044 33.7 6.9 81 140-225 212-318 (404)
376 2eih_A Alcohol dehydrogenase; 64.4 8 0.00027 34.2 5.1 79 140-225 165-265 (343)
377 1qor_A Quinone oxidoreductase; 64.0 9.5 0.00033 33.3 5.5 79 140-225 139-239 (327)
378 1vj0_A Alcohol dehydrogenase, 63.5 1.9 6.5E-05 39.0 0.8 82 140-226 194-299 (380)
379 1je3_A EC005, hypothetical 8.6 63.1 31 0.0011 24.8 7.2 70 190-267 26-95 (97)
380 3iyl_W VP1; non-enveloped viru 62.9 20 0.00069 37.2 8.0 108 142-249 828-980 (1299)
381 1iz0_A Quinone oxidoreductase; 62.4 1.8 6.1E-05 37.7 0.3 79 140-225 124-218 (302)
382 4dvj_A Putative zinc-dependent 61.9 18 0.00061 32.2 7.0 78 141-224 171-269 (363)
383 1tt7_A YHFP; alcohol dehydroge 61.2 5.7 0.0002 34.8 3.5 79 141-225 149-247 (330)
384 2j8z_A Quinone oxidoreductase; 61.0 9.2 0.00031 34.0 4.8 81 140-226 161-262 (354)
385 3oj0_A Glutr, glutamyl-tRNA re 60.7 18 0.00061 27.3 5.9 108 132-248 12-133 (144)
386 2cdc_A Glucose dehydrogenase g 60.1 16 0.00054 32.5 6.3 75 142-225 181-278 (366)
387 1jvb_A NAD(H)-dependent alcoho 60.0 10 0.00035 33.5 4.9 81 140-226 169-272 (347)
388 4ft4_B DNA (cytosine-5)-methyl 59.7 33 0.0011 34.0 9.1 45 209-255 417-461 (784)
389 1vpt_A VP39; RNA CAP, poly(A) 58.7 82 0.0028 28.0 10.2 76 141-231 75-159 (348)
390 4dkj_A Cytosine-specific methy 57.9 13 0.00046 34.0 5.4 28 143-170 11-48 (403)
391 3krt_A Crotonyl COA reductase; 56.7 21 0.00073 32.8 6.7 79 140-225 227-344 (456)
392 4eez_A Alcohol dehydrogenase 1 56.3 31 0.001 30.2 7.5 81 140-225 162-263 (348)
393 3hz7_A Uncharacterized protein 56.2 27 0.00092 24.5 5.7 57 207-272 17-74 (87)
394 3llv_A Exopolyphosphatase-rela 56.2 45 0.0015 24.7 7.5 54 143-198 7-79 (141)
395 2zb4_A Prostaglandin reductase 55.8 22 0.00077 31.3 6.5 80 140-226 157-261 (357)
396 2qrv_A DNA (cytosine-5)-methyl 55.6 8.3 0.00028 33.8 3.5 57 141-197 15-91 (295)
397 1xa0_A Putative NADPH dependen 55.0 13 0.00044 32.4 4.7 79 141-226 148-247 (328)
398 4dup_A Quinone oxidoreductase; 53.8 9.7 0.00033 33.8 3.7 80 140-225 166-265 (353)
399 1wly_A CAAR, 2-haloacrylate re 52.7 15 0.0005 32.2 4.7 79 140-225 144-244 (333)
400 2h6e_A ADH-4, D-arabinose 1-de 52.3 6.7 0.00023 34.7 2.4 80 141-226 170-270 (344)
401 3dqp_A Oxidoreductase YLBE; al 51.9 72 0.0025 25.4 8.6 57 144-201 2-75 (219)
402 3av4_A DNA (cytosine-5)-methyl 50.3 41 0.0014 35.7 8.2 112 142-255 851-1009(1330)
403 3h2s_A Putative NADH-flavin re 49.9 61 0.0021 25.8 7.9 80 144-224 2-103 (224)
404 4a0s_A Octenoyl-COA reductase/ 49.6 39 0.0013 30.8 7.2 32 188-225 305-336 (447)
405 2cf5_A Atccad5, CAD, cinnamyl 49.5 6.1 0.00021 35.2 1.6 81 141-226 180-276 (357)
406 3tqh_A Quinone oxidoreductase; 48.2 24 0.00084 30.6 5.4 79 140-224 151-244 (321)
407 3gpi_A NAD-dependent epimerase 47.4 77 0.0026 26.4 8.4 55 143-199 4-73 (286)
408 1wg8_A Predicted S-adenosylmet 47.2 7.9 0.00027 33.8 1.9 25 204-228 212-236 (285)
409 1yqd_A Sinapyl alcohol dehydro 47.1 12 0.0004 33.5 3.1 80 141-225 187-282 (366)
410 4f3n_A Uncharacterized ACR, CO 47.0 19 0.00065 33.3 4.6 29 142-170 138-176 (432)
411 3tka_A Ribosomal RNA small sub 44.2 9.1 0.00031 34.4 1.9 25 204-228 253-277 (347)
412 3pi7_A NADH oxidoreductase; gr 43.4 16 0.00055 32.2 3.4 31 189-225 233-263 (349)
413 1zkd_A DUF185; NESG, RPR58, st 43.2 12 0.00042 34.1 2.6 29 142-170 81-121 (387)
414 3ijr_A Oxidoreductase, short c 42.8 92 0.0031 26.4 8.2 84 141-224 46-181 (291)
415 4a2c_A Galactitol-1-phosphate 41.8 98 0.0034 26.7 8.4 81 140-225 159-260 (346)
416 4e4y_A Short chain dehydrogena 41.8 76 0.0026 25.9 7.3 83 142-224 4-125 (244)
417 3gaz_A Alcohol dehydrogenase s 41.7 23 0.00079 31.1 4.2 78 140-225 149-246 (343)
418 1zsy_A Mitochondrial 2-enoyl t 41.6 1.4E+02 0.0047 26.1 9.4 81 139-225 165-270 (357)
419 3e8x_A Putative NAD-dependent 41.5 1.1E+02 0.0038 24.6 8.2 60 141-201 20-96 (236)
420 3gqv_A Enoyl reductase; medium 41.3 91 0.0031 27.5 8.2 80 140-225 163-263 (371)
421 3fbg_A Putative arginate lyase 41.1 36 0.0012 29.9 5.4 78 141-224 150-247 (346)
422 3ew7_A LMO0794 protein; Q8Y8U8 40.8 1.3E+02 0.0044 23.6 9.2 80 144-224 2-101 (221)
423 3pxx_A Carveol dehydrogenase; 40.1 1.1E+02 0.0037 25.5 8.2 84 141-224 9-152 (287)
424 3l9w_A Glutathione-regulated p 39.6 88 0.003 28.5 7.9 78 143-224 5-101 (413)
425 3oig_A Enoyl-[acyl-carrier-pro 39.4 1.4E+02 0.0049 24.5 8.8 85 141-225 6-147 (266)
426 3v2g_A 3-oxoacyl-[acyl-carrier 38.4 1.3E+02 0.0044 25.1 8.4 85 141-225 30-165 (271)
427 2vn8_A Reticulon-4-interacting 38.3 30 0.001 30.8 4.4 81 140-225 182-280 (375)
428 1lss_A TRK system potassium up 38.3 1.1E+02 0.0037 22.0 8.8 77 142-223 4-100 (140)
429 1whz_A Hypothetical protein; a 37.4 41 0.0014 22.2 4.0 21 237-257 5-25 (70)
430 4eso_A Putative oxidoreductase 36.4 50 0.0017 27.5 5.3 85 141-225 7-138 (255)
431 3is3_A 17BETA-hydroxysteroid d 36.0 1E+02 0.0034 25.7 7.3 85 141-225 17-152 (270)
432 1m6y_A S-adenosyl-methyltransf 34.7 13 0.00045 32.6 1.3 25 204-228 224-248 (301)
433 2q1w_A Putative nucleotide sug 34.1 67 0.0023 27.6 6.0 59 142-201 21-101 (333)
434 3trk_A Nonstructural polyprote 32.9 30 0.001 30.0 3.2 65 184-255 206-282 (324)
435 3slk_A Polyketide synthase ext 32.9 39 0.0013 33.8 4.6 79 140-225 344-442 (795)
436 4e2x_A TCAB9; kijanose, tetron 32.9 2.1E+02 0.0073 25.3 9.4 79 141-224 318-409 (416)
437 1pav_A Hypothetical protein TA 32.0 17 0.00058 24.7 1.3 61 199-267 14-74 (78)
438 4egb_A DTDP-glucose 4,6-dehydr 31.9 79 0.0027 27.1 6.1 60 141-201 23-110 (346)
439 2g1u_A Hypothetical protein TM 31.6 1.6E+02 0.0055 22.0 7.9 82 140-223 17-116 (155)
440 3i6i_A Putative leucoanthocyan 31.6 1.5E+02 0.005 25.5 7.8 113 143-257 11-158 (346)
441 4id9_A Short-chain dehydrogena 31.2 1.2E+02 0.0042 25.9 7.2 60 141-201 18-89 (347)
442 4fgs_A Probable dehydrogenase 30.7 1E+02 0.0035 26.3 6.4 84 141-224 28-158 (273)
443 2eez_A Alanine dehydrogenase; 30.1 13 0.00044 33.4 0.5 83 141-225 165-266 (369)
444 4g9j_C Synthetic peptide, seri 29.8 9.1 0.00031 19.9 -0.3 10 7-16 2-11 (26)
445 2vhw_A Alanine dehydrogenase; 29.7 16 0.00055 32.9 1.1 83 141-225 167-268 (377)
446 3oh8_A Nucleoside-diphosphate 29.4 3.4E+02 0.012 25.0 10.5 58 142-200 147-212 (516)
447 2rir_A Dipicolinate synthase, 29.2 54 0.0018 28.2 4.4 78 140-224 155-245 (300)
448 4a27_A Synaptic vesicle membra 28.8 52 0.0018 28.8 4.3 80 140-226 141-239 (349)
449 1qsg_A Enoyl-[acyl-carrier-pro 27.8 2.3E+02 0.0079 23.2 8.2 59 142-200 9-98 (265)
450 3r3s_A Oxidoreductase; structu 26.9 1.5E+02 0.005 25.1 6.8 85 141-225 48-185 (294)
451 3ksu_A 3-oxoacyl-acyl carrier 26.8 1.2E+02 0.0041 25.1 6.2 84 141-224 10-146 (262)
452 3gvx_A Glycerate dehydrogenase 26.4 18 0.00061 31.6 0.7 105 141-253 121-230 (290)
453 3grk_A Enoyl-(acyl-carrier-pro 25.6 2.6E+02 0.009 23.4 8.3 85 141-225 30-169 (293)
454 1ks9_A KPA reductase;, 2-dehyd 25.4 1.1E+02 0.0038 25.4 5.7 79 144-224 2-96 (291)
455 3ek2_A Enoyl-(acyl-carrier-pro 25.3 2.1E+02 0.007 23.4 7.4 85 141-225 13-153 (271)
456 4gua_A Non-structural polyprot 24.7 66 0.0023 30.9 4.2 42 183-225 216-269 (670)
457 3u5t_A 3-oxoacyl-[acyl-carrier 24.4 1.8E+02 0.0062 24.1 6.9 85 141-225 26-161 (267)
458 2pd4_A Enoyl-[acyl-carrier-pro 24.4 1.6E+02 0.0056 24.4 6.6 59 142-200 6-95 (275)
459 3ruf_A WBGU; rossmann fold, UD 24.4 92 0.0032 26.7 5.1 58 142-200 25-111 (351)
460 3fni_A Putative diflavin flavo 24.4 2.3E+02 0.008 21.5 7.0 62 189-255 56-119 (159)
461 1id1_A Putative potassium chan 24.2 2.2E+02 0.0075 21.1 7.2 78 143-224 4-104 (153)
462 3sxp_A ADP-L-glycero-D-mannohe 24.2 1.8E+02 0.0062 25.0 7.1 60 141-201 9-102 (362)
463 3orf_A Dihydropteridine reduct 24.0 2.9E+02 0.0099 22.4 8.8 84 142-225 22-144 (251)
464 2h7i_A Enoyl-[acyl-carrier-pro 23.9 1.2E+02 0.0042 25.1 5.7 85 141-225 6-148 (269)
465 3p2y_A Alanine dehydrogenase/p 23.2 24 0.00083 32.0 1.0 84 141-224 183-301 (381)
466 1pjc_A Protein (L-alanine dehy 23.1 24 0.00081 31.6 0.9 83 142-224 167-266 (361)
467 3sx2_A Putative 3-ketoacyl-(ac 23.1 2.1E+02 0.0073 23.6 7.1 61 141-201 12-114 (278)
468 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.9 99 0.0034 26.1 4.9 60 141-201 11-86 (321)
469 3ggo_A Prephenate dehydrogenas 22.8 2.8E+02 0.0097 23.8 8.0 76 143-222 34-125 (314)
470 3h7a_A Short chain dehydrogena 21.9 2.1E+02 0.0073 23.3 6.8 61 141-201 6-95 (252)
471 4imr_A 3-oxoacyl-(acyl-carrier 21.9 2.5E+02 0.0085 23.3 7.3 60 141-200 32-120 (275)
472 1x13_A NAD(P) transhydrogenase 21.6 27 0.00091 31.8 0.9 31 141-171 171-206 (401)
473 3o38_A Short chain dehydrogena 21.6 1.8E+02 0.0061 23.8 6.2 61 141-201 21-113 (266)
474 3tjr_A Short chain dehydrogena 21.4 1.7E+02 0.0059 24.7 6.2 60 141-200 30-119 (301)
475 3k31_A Enoyl-(acyl-carrier-pro 21.3 3.3E+02 0.011 22.8 8.0 85 141-225 29-168 (296)
476 3ic5_A Putative saccharopine d 21.1 1.1E+02 0.0038 21.2 4.2 55 142-198 5-78 (118)
477 3sc4_A Short chain dehydrogena 21.1 2.5E+02 0.0085 23.4 7.1 61 141-201 8-105 (285)
478 4e6p_A Probable sorbitol dehyd 20.9 2.3E+02 0.008 23.1 6.8 60 141-200 7-93 (259)
479 3dii_A Short-chain dehydrogena 20.8 2.1E+02 0.0073 23.2 6.5 58 143-200 3-86 (247)
480 3gvc_A Oxidoreductase, probabl 20.8 2.1E+02 0.0071 23.9 6.6 61 141-201 28-115 (277)
481 3edm_A Short chain dehydrogena 20.5 2.6E+02 0.0087 22.9 7.0 84 141-224 7-142 (259)
482 3ny7_A YCHM protein, sulfate t 20.1 2.4E+02 0.0084 20.1 6.5 36 205-252 64-99 (118)
No 1
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.97 E-value=5.5e-31 Score=226.20 Aligned_cols=214 Identities=51% Similarity=0.880 Sum_probs=188.6
Q ss_pred HHccccccccceeccccccCCcHHHHHHHhcChhhHHHHHHhHHhhhccCCCcHHHHHHHHhhccCCCCEEEEEcCcccH
Q 022592 75 MRARLSGGHFRMLNEKLYTCTGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDAR 154 (294)
Q Consensus 75 m~~~l~~~~fr~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~ 154 (294)
|+..+.+..|+++++..+........++|...+..|+.+...|......|+...+..++..+....++.+|||||||+|.
T Consensus 1 m~~~~~~~~fr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~ 80 (215)
T 2zfu_A 1 MAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCR 80 (215)
T ss_dssp -CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCH
T ss_pred ChhHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCH
Confidence 34456778899999999998888888999999999999999998888899998888888888765566799999999999
Q ss_pred HHHHhccceEEEeccCCCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCC
Q 022592 155 LAKSVKNKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNT 234 (294)
Q Consensus 155 ~~~~l~~~v~gvD~s~~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~ 234 (294)
++..++..++|+|+|+.++.++.+|+..+|+++++||+|++..++|+.++..++.++.++|+|||.+++.++...+.
T Consensus 81 ~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~--- 157 (215)
T 2zfu_A 81 LASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE--- 157 (215)
T ss_dssp HHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCS---
T ss_pred HHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCC---
Confidence 99999889999999999999999999999998899999999999988899999999999999999999998765442
Q ss_pred CCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEECCccccc-cccCCCCcccccccccC
Q 022592 235 GGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEKQNSK-SKEIQWPELKPCLYKRR 294 (294)
Q Consensus 235 ~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~~~~~~-~~~~~~~~~~~~~~~~~ 294 (294)
+.+++..+++++||+++........+++++++|....+.. .+.+.|..|+||+||||
T Consensus 158 ---~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~~~~k~ 215 (215)
T 2zfu_A 158 ---DVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR 215 (215)
T ss_dssp ---CHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECSSCSSCTTCCCGGGCCCCCCCCC-
T ss_pred ---CHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecCccccchhhhcccccccchhcccC
Confidence 7799999999999999998888889999999998654441 35566889999999998
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=1.5e-19 Score=154.76 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=117.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~ 188 (294)
..++..+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++++++
T Consensus 27 ~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 27 EKVLKEFGLK-EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHHHTCC-TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHHHhCCC-CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 4566666544 66799999999999888775 3799999987 368899999999999899
Q ss_pred CccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC----CCCCCHHHHHHHHHHCCCeEEEEeccCCeE
Q 022592 189 SVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN----TGGADPNKFSKAVCDLGFAPVSKDFSNKMF 263 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f 263 (294)
+||+|+++.+++|. ++..+++++.++|+|||.+++.++....... ...++.+++..+++++||+++........+
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 185 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYC 185 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTE
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCce
Confidence 99999999999995 8899999999999999999999876543221 223789999999999999999877666777
Q ss_pred EEEEEEECC
Q 022592 264 IMFYFKKKE 272 (294)
Q Consensus 264 ~~i~~~k~~ 272 (294)
++++++|..
T Consensus 186 ~~~~~~k~~ 194 (219)
T 3dh0_A 186 FGVYAMIVK 194 (219)
T ss_dssp EEEEEECC-
T ss_pred EEEEEEecc
Confidence 788888864
No 3
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=1.3e-18 Score=148.41 Aligned_cols=138 Identities=10% Similarity=0.165 Sum_probs=110.3
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-----------CCCcEEEccCCCCCCCCCCccEE
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTPLNSSSVDVA 193 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp~~~~~fD~V 193 (294)
....++..+....++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.++ +++++||+|
T Consensus 33 ~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v 111 (218)
T 3ou2_A 33 AAPAALERLRAGNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAV 111 (218)
T ss_dssp THHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEE
T ss_pred HHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEE
Confidence 346677777755567799999999999998887 4899999987 4688999999888 778899999
Q ss_pred EEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeecCCCC------------------CC-------CCCCCHHHHHHH
Q 022592 194 VFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRFD------------------PN-------TGGADPNKFSKA 245 (294)
Q Consensus 194 i~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~~------------------~~-------~~~~~~~~~~~~ 245 (294)
++..+++|.+. ..+++++.++|+|||.+++.++..... +. ...++.+++..+
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTER 191 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHH
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHH
Confidence 99999999643 799999999999999999987643110 00 112588999999
Q ss_pred HHHCCCeEEEEeccCCeEEEE
Q 022592 246 VCDLGFAPVSKDFSNKMFIMF 266 (294)
Q Consensus 246 l~~~Gf~~~~~~~~~~~f~~i 266 (294)
++++||++........+++.+
T Consensus 192 l~~aGf~v~~~~~~~~~~~~~ 212 (218)
T 3ou2_A 192 LTALGWSCSVDEVHPGFLYAT 212 (218)
T ss_dssp HHHTTEEEEEEEEETTEEEEE
T ss_pred HHHCCCEEEeeeccccceEee
Confidence 999999987776666555544
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=4.5e-19 Score=157.33 Aligned_cols=131 Identities=21% Similarity=0.233 Sum_probs=106.7
Q ss_pred CCCCEEEEEcCcccHHHHHhcc-------ceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 140 SPSLVIADFGCGDARLAKSVKN-------KVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~-------~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
.++.+|||||||+|.++..++. +|+|+|+|+ .++.++++|+.++|++ .||+|+++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 4778999999999998887752 699999997 2678999999998874 59999999
Q ss_pred ccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCC---------------------CC------------CCCCCHH
Q 022592 197 LSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFD---------------------PN------------TGGADPN 240 (294)
Q Consensus 197 ~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~---------------------~~------------~~~~~~~ 240 (294)
.+|+|.+ +..++++++++|+|||.|++.+...... .. ...++.+
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~ 226 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVE 226 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHH
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHH
Confidence 9999963 4578999999999999999987543110 00 1125788
Q ss_pred HHHHHHHHCCCeEEEEeccCCeEEEEEEEECC
Q 022592 241 KFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKE 272 (294)
Q Consensus 241 ~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~ 272 (294)
++..+|+++||+.+++.+....|..++++|.+
T Consensus 227 ~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~ 258 (261)
T 4gek_A 227 THKARLHKAGFEHSELWFQCFNFGSLVALKAE 258 (261)
T ss_dssp HHHHHHHHHTCSEEEEEEEETTEEEEEEECCT
T ss_pred HHHHHHHHcCCCeEEEEEEeccEEEEEEEEcC
Confidence 89999999999999987777788889998875
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=9.2e-19 Score=154.13 Aligned_cols=145 Identities=18% Similarity=0.238 Sum_probs=110.1
Q ss_pred HHHhHHhhhccCCCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCc
Q 022592 113 YHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPS 174 (294)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~ 174 (294)
-+.+|.....+.+...+..+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.
T Consensus 10 ~~~~~~~s~~~~~~~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~ 88 (260)
T 1vl5_A 10 HHHMYVTSQIHAKGSDLAKLMQIAALK-GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVE 88 (260)
T ss_dssp -------------CCCHHHHHHHHTCC-SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEE
T ss_pred cceeeecCccccCHHHHHHHHHHhCCC-CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceE
Confidence 345666666666677778888888765 67799999999999998887 4899999987 3578
Q ss_pred EEEccCCCCCCCCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC----------------CCCCCCC
Q 022592 175 VIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF----------------DPNTGGA 237 (294)
Q Consensus 175 ~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~----------------~~~~~~~ 237 (294)
++.+|+..+|+++++||+|++..+++|. ++..++.++.++|+|||.|++.+..... ......+
T Consensus 89 ~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (260)
T 1vl5_A 89 YVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAW 168 (260)
T ss_dssp EEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCC
T ss_pred EEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCC
Confidence 9999999999999999999999999995 8999999999999999999998643311 1123447
Q ss_pred CHHHHHHHHHHCCCeEEEEec
Q 022592 238 DPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 238 ~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
+..++..+|+++||.++....
T Consensus 169 ~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 169 KKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp BHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEE
Confidence 889999999999999887544
No 6
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.79 E-value=1.8e-18 Score=150.11 Aligned_cols=117 Identities=26% Similarity=0.300 Sum_probs=99.9
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC------------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-CH
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NF 204 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~ 204 (294)
++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+++++++||+|++..+++|. ++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 132 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEP 132 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCH
Confidence 56799999999999998887 3799999987 36789999999999989999999999999995 88
Q ss_pred HHHHHHHHHhcCcCcEEEEEeecCCCC-------------CCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 205 PNYLQEAQRVLKPSGWLLIAEVKSRFD-------------PNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e~~~~~~-------------~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
..++.++.++|+|||.+++.+...... .....++..++..+++++||+++...
T Consensus 133 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 133 LRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 999999999999999999987543211 11233788999999999999998844
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.79 E-value=1.4e-18 Score=150.41 Aligned_cols=143 Identities=19% Similarity=0.201 Sum_probs=113.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------CCCcEEEccCCCCCCCCCCcc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
..++..+....++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..++++ ++||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCce
Confidence 4455555544466899999999999988776 3799999987 2678999999999887 8999
Q ss_pred EEEEcccccCCCHH---HHHHHHHHhcCcCcEEEEEeecCCCC--------------------------------CCCCC
Q 022592 192 VAVFCLSLMGINFP---NYLQEAQRVLKPSGWLLIAEVKSRFD--------------------------------PNTGG 236 (294)
Q Consensus 192 ~Vi~~~~l~~~~~~---~~l~el~r~LkpgG~l~i~e~~~~~~--------------------------------~~~~~ 236 (294)
+|++..+++|.+.. .+++++.++|+|||.+++.+...... .....
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKD 191 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccc
Confidence 99999999997433 59999999999999999987432110 11223
Q ss_pred CCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEECCc
Q 022592 237 ADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEK 273 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~~ 273 (294)
++.+++..+|+++||+++...+....|.++...+...
T Consensus 192 ~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~~ 228 (234)
T 3dtn_A 192 IEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKTEG 228 (234)
T ss_dssp CBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC--
T ss_pred cCHHHHHHHHHHcCCCceeeeeeecceeEEEEEeccc
Confidence 6889999999999999999888888898888877653
No 8
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.78 E-value=2.6e-18 Score=147.13 Aligned_cols=141 Identities=12% Similarity=0.137 Sum_probs=110.5
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------C-CCcEEEccCCCCCCCCCCccEEE
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------N-DPSVIACDMSNTPLNSSSVDVAV 194 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~-~~~~~~~d~~~lp~~~~~fD~Vi 194 (294)
...+++.+... ++.+|||||||+|.++..++ ..++|+|+++ . ++.++.+|+..++++ ++||+|+
T Consensus 34 ~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 34 YEDILEDVVNK-SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIV 111 (220)
T ss_dssp HHHHHHHHHHT-CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEE
T ss_pred HHHHHHHhhcc-CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEE
Confidence 45567776655 66799999999999998887 4899999998 2 789999999999987 8999999
Q ss_pred EcccccCC-CHHH--HHHHHHHhcCcCcEEEEEeecCCCC----------------------CCCCCCCHHHHHHHHHHC
Q 022592 195 FCLSLMGI-NFPN--YLQEAQRVLKPSGWLLIAEVKSRFD----------------------PNTGGADPNKFSKAVCDL 249 (294)
Q Consensus 195 ~~~~l~~~-~~~~--~l~el~r~LkpgG~l~i~e~~~~~~----------------------~~~~~~~~~~~~~~l~~~ 249 (294)
+..+++|. ++.. +++++.++|+|||.+++.+...... .....++.+++..+|+++
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 191 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENN 191 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHT
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHC
Confidence 99999996 4444 9999999999999999986432110 001224789999999999
Q ss_pred CCeEEEEeccCCeEEEEEEEECC
Q 022592 250 GFAPVSKDFSNKMFIMFYFKKKE 272 (294)
Q Consensus 250 Gf~~~~~~~~~~~f~~i~~~k~~ 272 (294)
||+++...... ...++...+..
T Consensus 192 Gf~v~~~~~~~-~~w~~~~~~~~ 213 (220)
T 3hnr_A 192 GFHVTFTRLNH-FVWVMEATKQL 213 (220)
T ss_dssp TEEEEEEECSS-SEEEEEEEECS
T ss_pred CCEEEEeeccc-eEEEEeehhhh
Confidence 99998877764 44455555543
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=1.1e-18 Score=151.42 Aligned_cols=127 Identities=10% Similarity=0.115 Sum_probs=104.5
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC-----------CCcEEEccCCCCCCCCCCccEEEE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN-----------DPSVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~-----------~~~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
..+++.+....++.+|||||||+|.++..++ ..|+|+|+|+. ++.++.+|+.++ +++++||+|++
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~ 109 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVL 109 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEE
Confidence 4466666654466799999999999999887 38999999972 788999999887 46789999999
Q ss_pred cccccCC-CHHHHHHHHH-HhcCcCcEEEEEeecCCC------------------------CCCCCCCCHHHHHHHHHHC
Q 022592 196 CLSLMGI-NFPNYLQEAQ-RVLKPSGWLLIAEVKSRF------------------------DPNTGGADPNKFSKAVCDL 249 (294)
Q Consensus 196 ~~~l~~~-~~~~~l~el~-r~LkpgG~l~i~e~~~~~------------------------~~~~~~~~~~~~~~~l~~~ 249 (294)
..+|+|. ++..+++++. ++|+|||.+++.+..... ......++.+++..+++++
T Consensus 110 ~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 189 (250)
T 2p7i_A 110 THVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRA 189 (250)
T ss_dssp ESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHT
T ss_pred hhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHC
Confidence 9999995 8999999999 999999999998754321 0112347999999999999
Q ss_pred CCeEEEEe
Q 022592 250 GFAPVSKD 257 (294)
Q Consensus 250 Gf~~~~~~ 257 (294)
||+++...
T Consensus 190 Gf~~~~~~ 197 (250)
T 2p7i_A 190 GLQVTYRS 197 (250)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEe
Confidence 99998854
No 10
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=1.6e-18 Score=146.76 Aligned_cols=154 Identities=12% Similarity=0.120 Sum_probs=114.8
Q ss_pred HHHHHhcChhhHHHHHHhHHhhhccCCCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-----
Q 022592 99 ALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----- 170 (294)
Q Consensus 99 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----- 170 (294)
..++|+..+..|+........ .......++..+... .+.+|||||||+|.++..++ ..|+|+|+|+
T Consensus 5 ~~~~y~~~a~~y~~~~~~~~~-----~~~~~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~ 78 (203)
T 3h2b_A 5 VSKAYSSPTFDAEALLGTVIS-----AEDPDRVLIEPWATG-VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVEL 78 (203)
T ss_dssp HHHHHHCTTTCHHHHTCSSCC-----TTCTTHHHHHHHHHH-CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHH
T ss_pred HHHHHhhHHHHHHHHhhhhcc-----ccHHHHHHHHHHhcc-CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 445677666666554321110 011122233333333 26799999999999998887 3899999997
Q ss_pred -----CCCcEEEccCCCCCCCCCCccEEEEcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCCCC-------CCC
Q 022592 171 -----NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP-------NTG 235 (294)
Q Consensus 171 -----~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~-------~~~ 235 (294)
.++.++.+|+..+++++++||+|++..+++|. ++..+++++.++|+|||.+++..+...... ...
T Consensus 79 a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~ 158 (203)
T 3h2b_A 79 ARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAY 158 (203)
T ss_dssp HHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEE
T ss_pred HHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhc
Confidence 47899999999999888999999999999995 789999999999999999999876543211 111
Q ss_pred CCCHHHHHHHHHHCCCeEEEEec
Q 022592 236 GADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 236 ~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
.++.+++..+|+++||+++....
T Consensus 159 ~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 159 RWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp ECCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCcEEEEEe
Confidence 26899999999999999998554
No 11
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.77 E-value=1.7e-17 Score=142.61 Aligned_cols=147 Identities=19% Similarity=0.202 Sum_probs=111.7
Q ss_pred HHhcChhhHHHHHHhHHhhhccCCCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhccceEEEeccC--------CCC
Q 022592 102 YFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVKNKVFSFDLVS--------NDP 173 (294)
Q Consensus 102 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~~v~gvD~s~--------~~~ 173 (294)
.|+...+.|+.+........ ...+..+....++.+|||||||+|.++..++.. +|+|+|+ .++
T Consensus 16 ~~~~~~~~y~~~~~~~~~~~--------~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-~~vD~s~~~~~~a~~~~~ 86 (219)
T 1vlm_A 16 IFERFVNEYERWFLVHRFAY--------LSELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-IGVEPSERMAEIARKRGV 86 (219)
T ss_dssp HHHHTHHHHHHHHHHTHHHH--------HHHHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-EEEESCHHHHHHHHHTTC
T ss_pred ecchhHHHHHHHHHhcchhH--------HHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-hccCCCHHHHHHHHhcCC
Confidence 55566666666543321111 122223333334679999999999999998876 9999997 368
Q ss_pred cEEEccCCCCCCCCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC---------------CCCCCCC
Q 022592 174 SVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF---------------DPNTGGA 237 (294)
Q Consensus 174 ~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~---------------~~~~~~~ 237 (294)
.++.+|+..+++++++||+|++..+++|. ++..++.++.++|+|||.+++.+..... ......+
T Consensus 87 ~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (219)
T 1vlm_A 87 FVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFF 166 (219)
T ss_dssp EEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCC
T ss_pred EEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccC
Confidence 89999999999888899999999999995 8999999999999999999998654321 1122347
Q ss_pred CHHHHHHHHHHCCCeEEEEe
Q 022592 238 DPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 238 ~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+.+++..+|+++||+++...
T Consensus 167 ~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 167 STEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEe
Confidence 99999999999999998743
No 12
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.76 E-value=1.2e-18 Score=154.35 Aligned_cols=87 Identities=20% Similarity=0.282 Sum_probs=79.6
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC---------CCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHH
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL 208 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l 208 (294)
...+|||||||+|.++..|+ .+|+|+|+|+ .++.++++|++++|+++++||+|++..++||.++..++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~ 118 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFW 118 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHH
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHH
Confidence 44689999999999999887 4899999997 47889999999999999999999999999999999999
Q ss_pred HHHHHhcCcCcEEEEEeec
Q 022592 209 QEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 209 ~el~r~LkpgG~l~i~e~~ 227 (294)
.++.|+|||||.|++....
T Consensus 119 ~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 119 AELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp HHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCEEEEEECC
Confidence 9999999999999987643
No 13
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.76 E-value=6.4e-18 Score=139.06 Aligned_cols=136 Identities=18% Similarity=0.281 Sum_probs=112.3
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEccc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~ 198 (294)
+++.+... ++.+|||||||+|.++..++ ..++|+|+++ .++.+..+| .++++++||+|++..+
T Consensus 9 ~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 9 YLPNIFEG-KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS 84 (170)
T ss_dssp THHHHHSS-CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred HHHhcCcC-CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc
Confidence 44555443 56799999999999998887 3799999987 478888888 6778899999999999
Q ss_pred ccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC----CCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEECCc
Q 022592 199 LMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN----TGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEK 273 (294)
Q Consensus 199 l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~~ 273 (294)
++|. ++..+++++.++|+|||.+++.++....... ...++.+++..+++ ||+++........++.+++++...
T Consensus 85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~ 162 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTS 162 (170)
T ss_dssp STTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCC
T ss_pred hhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCC
Confidence 9995 8999999999999999999999876543222 23378999999999 999999888777888888888753
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.76 E-value=8.6e-19 Score=149.30 Aligned_cols=137 Identities=16% Similarity=0.239 Sum_probs=106.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~ 189 (294)
..+++.+... ++ +|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..+++++++
T Consensus 34 ~~~~~~~~~~-~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (219)
T 3dlc_A 34 ENIINRFGIT-AG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNY 111 (219)
T ss_dssp HHHHHHHCCC-EE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTC
T ss_pred HHHHHhcCCC-CC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccc
Confidence 3444544432 34 99999999999988886 3899999986 2678999999999999999
Q ss_pred ccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC-----------------C----CCCCCCCHHHHHHHHH
Q 022592 190 VDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF-----------------D----PNTGGADPNKFSKAVC 247 (294)
Q Consensus 190 fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~-----------------~----~~~~~~~~~~~~~~l~ 247 (294)
||+|++..+++|. ++..+++++.++|+|||.+++.+..... . .....++.+++..+|+
T Consensus 112 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (219)
T 3dlc_A 112 ADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLD 191 (219)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHH
T ss_pred ccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHH
Confidence 9999999999995 8999999999999999999998532210 0 1112246789999999
Q ss_pred HCCCeEEEEeccCCeEEEEEE
Q 022592 248 DLGFAPVSKDFSNKMFIMFYF 268 (294)
Q Consensus 248 ~~Gf~~~~~~~~~~~f~~i~~ 268 (294)
++||+++........+.+++.
T Consensus 192 ~aGf~~v~~~~~~~~~~~~~~ 212 (219)
T 3dlc_A 192 EIGISSYEIILGDEGFWIIIS 212 (219)
T ss_dssp HHTCSSEEEEEETTEEEEEEB
T ss_pred HcCCCeEEEEecCCceEEEEe
Confidence 999999887665555554443
No 15
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=5.1e-18 Score=149.60 Aligned_cols=143 Identities=14% Similarity=0.177 Sum_probs=110.8
Q ss_pred HHHHhhcc-CCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEcc
Q 022592 132 IVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (294)
Q Consensus 132 ~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~ 197 (294)
+++.+... +++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+++ +++||+|++..
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 34444332 345799999999999999887 3799999997 478999999999888 78899999998
Q ss_pred -cccCC----CHHHHHHHHHHhcCcCcEEEEEeecCC--CC---------------------------------------
Q 022592 198 -SLMGI----NFPNYLQEAQRVLKPSGWLLIAEVKSR--FD--------------------------------------- 231 (294)
Q Consensus 198 -~l~~~----~~~~~l~el~r~LkpgG~l~i~e~~~~--~~--------------------------------------- 231 (294)
+++|. +...+++++.++|+|||.|++..+... +.
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAG 198 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEec
Confidence 99986 456889999999999999999531100 00
Q ss_pred CC-----------CCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEECCccc
Q 022592 232 PN-----------TGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKEKQN 275 (294)
Q Consensus 232 ~~-----------~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~~~~ 275 (294)
.. ...++.+++..+|+++||+++.+........+++++|...+.
T Consensus 199 ~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a~~~ 253 (263)
T 3pfg_A 199 PDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGAKGE 253 (263)
T ss_dssp TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC---
T ss_pred CCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCCCCc
Confidence 00 122689999999999999999988777777788898875433
No 16
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.75 E-value=1.6e-17 Score=144.00 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=101.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---c-ceEEEeccC------------CCCcEEEccCCCCCCCCCCccEE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---N-KVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVA 193 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~-~v~gvD~s~------------~~~~~~~~d~~~lp~~~~~fD~V 193 (294)
..+...+... ++.+|||||||+|.++..++ . .|+|+|+|+ .++.++.+|+..+++++++||+|
T Consensus 33 ~~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 33 PALRAMLPEV-GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp HHHHHHSCCC-TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHHhcccc-CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEE
Confidence 3455555443 66799999999999988876 3 899999997 25788999999988888999999
Q ss_pred EEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCC-----------------CC-------------------CC
Q 022592 194 VFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP-----------------NT-------------------GG 236 (294)
Q Consensus 194 i~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~-----------------~~-------------------~~ 236 (294)
++..+++|. ++..+++++.++|+|||.+++......+.. .. ..
T Consensus 112 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (243)
T 3bkw_A 112 YSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHH 191 (243)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEE
T ss_pred EEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEe
Confidence 999999995 899999999999999999999764321000 00 01
Q ss_pred CCHHHHHHHHHHCCCeEEEEec
Q 022592 237 ADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
++.+++..+|+++||+++....
T Consensus 192 ~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 192 RTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEE
T ss_pred ccHHHHHHHHHHcCCEeeeecc
Confidence 4789999999999999988543
No 17
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=1.1e-17 Score=146.61 Aligned_cols=128 Identities=18% Similarity=0.276 Sum_probs=104.4
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~ 188 (294)
...++..+....++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 34455555444567799999999999998886 3899999997 238899999999999899
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCC------------CCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDP------------NTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~------------~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+||+|++..+++|.++..+++++.++|+|||.+++.+....... .....+.+++..+++++||+++..
T Consensus 114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 99999999999999999999999999999999999875311110 011257899999999999999874
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=1.6e-17 Score=146.88 Aligned_cols=129 Identities=21% Similarity=0.308 Sum_probs=105.0
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~ 188 (294)
...++..+....++.+|||||||+|.++..++ ..|+|+|+|+ +++.++.+|+.++|++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 34455555534467899999999999999887 2899999997 348899999999998889
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCC------------CCCCCHHHHHHHHHHCCCeEEEE
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN------------TGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~------------~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+||+|++..+++|.++..+++++.++|+|||.+++.++....... ....+..++.++++++||+++..
T Consensus 114 ~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999999999999999999999999999999998754211100 01247889999999999999875
Q ss_pred e
Q 022592 257 D 257 (294)
Q Consensus 257 ~ 257 (294)
.
T Consensus 194 ~ 194 (267)
T 3kkz_A 194 F 194 (267)
T ss_dssp E
T ss_pred E
Confidence 4
No 19
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.74 E-value=8.4e-18 Score=146.34 Aligned_cols=127 Identities=16% Similarity=0.245 Sum_probs=102.1
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------CCCcEEEccCCCC--CCCCCCccEEEEcccc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------NDPSVIACDMSNT--PLNSSSVDVAVFCLSL 199 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------~~~~~~~~d~~~l--p~~~~~fD~Vi~~~~l 199 (294)
+...+....++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+... |+++++||+|++..++
T Consensus 32 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l 111 (240)
T 3dli_A 32 LRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFV 111 (240)
T ss_dssp HGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCG
T ss_pred HHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCch
Confidence 33444444466799999999999998886 3899999998 3578888888775 7888999999999999
Q ss_pred cCC---CHHHHHHHHHHhcCcCcEEEEEeecCCC----------CCCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 200 MGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRF----------DPNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 200 ~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~----------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
+|. +...+++++.++|+|||.+++....... ......++.+++..+++++||+++....
T Consensus 112 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 112 EHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp GGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred hhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 995 4479999999999999999998765421 1223447889999999999999887543
No 20
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.73 E-value=4.5e-18 Score=148.98 Aligned_cols=125 Identities=20% Similarity=0.245 Sum_probs=100.5
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---c-ceEEEeccC------------CCCcEEEccCCCCCCCCCCccEEEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---N-KVFSFDLVS------------NDPSVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~-~v~gvD~s~------------~~~~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
++..+... ++.+|||||||+|.++..++ . .|+|+|+|+ .++.++.+|+..+++++++||+|++
T Consensus 36 l~~~~~~~-~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 36 LKKMLPDF-NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLS 114 (253)
T ss_dssp HHTTCCCC-TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEE
T ss_pred HHHhhhcc-CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEE
Confidence 34444332 56799999999999998886 2 899999997 3678999999999998899999999
Q ss_pred cccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC----------CCCC--------C-------------------CC
Q 022592 196 CLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF----------DPNT--------G-------------------GA 237 (294)
Q Consensus 196 ~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~----------~~~~--------~-------------------~~ 237 (294)
..+++|. ++..+++++.++|+|||.+++....... .... . ..
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (253)
T 3g5l_A 115 SLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHR 194 (253)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECC
T ss_pred chhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEec
Confidence 9999995 8999999999999999999997432210 0000 0 02
Q ss_pred CHHHHHHHHHHCCCeEEEEe
Q 022592 238 DPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 238 ~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+.+++..+|+++||+++.+.
T Consensus 195 t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 195 TVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp CHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCeeeeee
Confidence 88999999999999999865
No 21
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.73 E-value=2.4e-17 Score=141.07 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=101.5
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------CCCcEEEccCCCC---CCCCC-CccEE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNT---PLNSS-SVDVA 193 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------~~~~~~~~d~~~l---p~~~~-~fD~V 193 (294)
..++..+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+..+ ++..+ +||+|
T Consensus 42 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 42 QAILLAILGR-QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHHHHHHHHT-CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred HHHHHHhhcC-CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEE
Confidence 3456666655 45799999999999998887 3799999997 4677888887765 54444 59999
Q ss_pred EEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCC-----------------------CCCCHHHHHHHHHHCC
Q 022592 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNT-----------------------GGADPNKFSKAVCDLG 250 (294)
Q Consensus 194 i~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~-----------------------~~~~~~~~~~~l~~~G 250 (294)
++..++++.++..+++++.++|+|||.+++.+......... ..++.+++..+|+++|
T Consensus 121 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 121 CANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp EEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred EECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 99999997799999999999999999999987644222110 1148999999999999
Q ss_pred CeEEEEec
Q 022592 251 FAPVSKDF 258 (294)
Q Consensus 251 f~~~~~~~ 258 (294)
|+++.+..
T Consensus 201 f~~~~~~~ 208 (227)
T 3e8s_A 201 LRLVSLQE 208 (227)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 99998554
No 22
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.73 E-value=2.8e-17 Score=140.05 Aligned_cols=125 Identities=17% Similarity=0.200 Sum_probs=101.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC---------CCcEEEccCCCCCCCCCCccEEEEcccc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN---------DPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~---------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
+...+....++.+|||||||+|.++..++ ..|+|+|+|+. ++.+..+|+..++ ++++||+|++..++
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 112 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACL 112 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCG
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCch
Confidence 44444444567899999999999998887 37999999982 6788999999988 78899999999999
Q ss_pred cCC---CHHHHHHHHHHhcCcCcEEEEEeecCCC------CCCCCCCCHHHHHHHHHHCC-CeEEEEe
Q 022592 200 MGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRF------DPNTGGADPNKFSKAVCDLG-FAPVSKD 257 (294)
Q Consensus 200 ~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~------~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 257 (294)
+|. ++..+++++.++|+|||.+++....... ......++.+++..+++++| |+++...
T Consensus 113 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 113 LHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred hhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 996 5679999999999999999998544321 11223479999999999999 9998844
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.72 E-value=8.5e-17 Score=140.06 Aligned_cols=127 Identities=13% Similarity=0.180 Sum_probs=105.0
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccE
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~ 192 (294)
.++..+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|+++++||+
T Consensus 12 ~~~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 12 LMIKTAECR-AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp HHHHHHTCC-TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred hHHHHhCcC-CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEE
Confidence 355555544 67899999999999998887 4899999987 3578999999999998999999
Q ss_pred EEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC----------------CCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 193 AVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF----------------DPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 193 Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~----------------~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|++..+++|. ++..++.++.++|+|||.+++.+..... ......++.+++..+|+++||.++.
T Consensus 91 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 91 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQD 170 (239)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEE
T ss_pred EEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEE
Confidence 9999999985 8999999999999999999998754311 1123447899999999999999887
Q ss_pred Eec
Q 022592 256 KDF 258 (294)
Q Consensus 256 ~~~ 258 (294)
...
T Consensus 171 ~~~ 173 (239)
T 1xxl_A 171 IQK 173 (239)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.72 E-value=2.2e-17 Score=149.51 Aligned_cols=129 Identities=18% Similarity=0.241 Sum_probs=105.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~ 189 (294)
..+++.+....++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+|+++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 3355555433467899999999999988776 3799999987 2588999999999998899
Q ss_pred ccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCC--------------CCCCCCHHHHHHHHHHCCCeEEE
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDP--------------NTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
||+|++..+++|.++..++.++.++|+|||.+++.++...... ....++.+++..+++++||+++.
T Consensus 186 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~ 265 (312)
T 3vc1_A 186 VTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHT 265 (312)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEE
T ss_pred EeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999999999999999875432211 01235889999999999999888
Q ss_pred Eec
Q 022592 256 KDF 258 (294)
Q Consensus 256 ~~~ 258 (294)
...
T Consensus 266 ~~~ 268 (312)
T 3vc1_A 266 IVD 268 (312)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 25
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.72 E-value=5.4e-17 Score=145.51 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=105.0
Q ss_pred HHHHHHHhh---ccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCC
Q 022592 129 VNIIVKWLK---DHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPL 185 (294)
Q Consensus 129 ~~~~~~~l~---~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~ 185 (294)
+..++..+. ...++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|+
T Consensus 67 ~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 146 (297)
T 2o57_A 67 DEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC 146 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS
T ss_pred HHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC
Confidence 345666661 33467799999999999988876 3899999997 257899999999999
Q ss_pred CCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCC-------------CCCCCCHHHHHHHHHHCCC
Q 022592 186 NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP-------------NTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~-------------~~~~~~~~~~~~~l~~~Gf 251 (294)
++++||+|++..+++|. ++..+++++.++|+|||.|++.++...... .....+..++..+++++||
T Consensus 147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTE
T ss_pred CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCC
Confidence 99999999999999995 889999999999999999999875432111 1112488999999999999
Q ss_pred eEEEEec
Q 022592 252 APVSKDF 258 (294)
Q Consensus 252 ~~~~~~~ 258 (294)
+++....
T Consensus 227 ~~~~~~~ 233 (297)
T 2o57_A 227 VTLRTFS 233 (297)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9987543
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.72 E-value=6.9e-17 Score=142.85 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=103.7
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCc
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~f 190 (294)
.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|+++++|
T Consensus 52 ~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 130 (273)
T 3bus_A 52 EMIALLDVR-SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASF 130 (273)
T ss_dssp HHHHHSCCC-TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCE
T ss_pred HHHHhcCCC-CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCc
Confidence 344444333 66799999999999988876 3899999986 25789999999999989999
Q ss_pred cEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC----------------CCCCCCCCHHHHHHHHHHCCCeE
Q 022592 191 DVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF----------------DPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 191 D~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~----------------~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
|+|++..+++|. ++..+++++.++|+|||.+++.++.... .+....++.+++..+++++||++
T Consensus 131 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 210 (273)
T 3bus_A 131 DAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVV 210 (273)
T ss_dssp EEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEE
T ss_pred cEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeE
Confidence 999999999996 8999999999999999999998754321 01223478899999999999999
Q ss_pred EEEec
Q 022592 254 VSKDF 258 (294)
Q Consensus 254 ~~~~~ 258 (294)
+....
T Consensus 211 ~~~~~ 215 (273)
T 3bus_A 211 TSTVD 215 (273)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87543
No 27
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=1.8e-17 Score=143.36 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=102.4
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEc-ccccCC---
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC-LSLMGI--- 202 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~-~~l~~~--- 202 (294)
.++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..+++ +++||+|++. .+++|.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~ 117 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTT 117 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCH
Confidence 356799999999999998887 3799999997 468899999999887 6789999964 488885
Q ss_pred -CHHHHHHHHHHhcCcCcEEEEEeecCCCC----------------------------------------C-C-------
Q 022592 203 -NFPNYLQEAQRVLKPSGWLLIAEVKSRFD----------------------------------------P-N------- 233 (294)
Q Consensus 203 -~~~~~l~el~r~LkpgG~l~i~e~~~~~~----------------------------------------~-~------- 233 (294)
+...+++++.++|+|||.+++.++..... . .
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFS 197 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEE
Confidence 34689999999999999999975321100 0 0
Q ss_pred ----CCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEE
Q 022592 234 ----TGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 234 ----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k 270 (294)
...++.+++..+|+++||+++..........+++++|
T Consensus 198 ~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 198 DVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 0126899999999999998888776655667777776
No 28
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=5.8e-17 Score=140.46 Aligned_cols=141 Identities=18% Similarity=0.237 Sum_probs=106.5
Q ss_pred HHHHHHhhcc-CCCCEEEEEcCcccHHHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCCcc
Q 022592 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
..+...+... .++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..++++ ++||
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD 103 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFD 103 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEE
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCce
Confidence 3445555433 356799999999999998887 3799999987 1688999999998876 8899
Q ss_pred EEEEcc-cccCC----CHHHHHHHHHHhcCcCcEEEEEeecCC-----C----------------C--------------
Q 022592 192 VAVFCL-SLMGI----NFPNYLQEAQRVLKPSGWLLIAEVKSR-----F----------------D-------------- 231 (294)
Q Consensus 192 ~Vi~~~-~l~~~----~~~~~l~el~r~LkpgG~l~i~e~~~~-----~----------------~-------------- 231 (294)
+|++.. +++|. ++..+++++.++|+|||.+++...... + .
T Consensus 104 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (246)
T 1y8c_A 104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISF 183 (246)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEE
Confidence 999998 99986 467899999999999999998432110 0 0
Q ss_pred --------------CCCCCCCHHHHHHHHHHCCCeEEEEecc--------CCeEEEEEEEEC
Q 022592 232 --------------PNTGGADPNKFSKAVCDLGFAPVSKDFS--------NKMFIMFYFKKK 271 (294)
Q Consensus 232 --------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~--------~~~f~~i~~~k~ 271 (294)
.....++.+++..+|+++||+++..... .....+++++|.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 184 FVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp EEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred EEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 0012369999999999999999886422 234556777764
No 29
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.72 E-value=4.1e-17 Score=145.53 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=97.4
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCC-CCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTP-LNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp-~~~~~fD~Vi~~~~l~ 200 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++ +++++||+|++..+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 35699999999999998887 4899999997 35679999999887 7789999999999999
Q ss_pred CC-CHHHHHHHHHHhcCcCcEEEEEeecCC-------------------------CCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 201 GI-NFPNYLQEAQRVLKPSGWLLIAEVKSR-------------------------FDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 201 ~~-~~~~~l~el~r~LkpgG~l~i~e~~~~-------------------------~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
|. ++..+++++.++|+|||.+++..+... .......++.+++..+|+++||+++
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~ 227 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIM 227 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEE
T ss_pred cccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCcee
Confidence 95 899999999999999999999864310 0011233689999999999999998
Q ss_pred EEe
Q 022592 255 SKD 257 (294)
Q Consensus 255 ~~~ 257 (294)
...
T Consensus 228 ~~~ 230 (285)
T 4htf_A 228 GKT 230 (285)
T ss_dssp EEE
T ss_pred eee
Confidence 744
No 30
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=2.6e-17 Score=145.26 Aligned_cols=127 Identities=19% Similarity=0.190 Sum_probs=102.0
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
...+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+..+|+++++||+|++.
T Consensus 23 ~~~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (261)
T 3ege_A 23 VNAIINLLNLP-KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISI 101 (261)
T ss_dssp HHHHHHHHCCC-TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEE
T ss_pred HHHHHHHhCCC-CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEc
Confidence 34455555433 66799999999999999887 4899999997 26789999999999999999999999
Q ss_pred ccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC---------------CCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 197 LSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN---------------TGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 197 ~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~---------------~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
.+++|. ++..+++++.++|+ ||++++.++....... ....+.+.+. +|+++||.++....
T Consensus 102 ~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 102 LAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp SCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred chHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 999995 89999999999999 9999998765322110 1124667788 99999998877543
No 31
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.71 E-value=9e-17 Score=141.03 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=99.3
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC-------------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI- 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~- 202 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|+++++||+|++..+++|.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 134 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALS 134 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSC
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcC
Confidence 66799999999999988876 3799999997 36789999999999989999999999999996
Q ss_pred --CHHHHHHHHHHhcCcCcEEEEEeecCCCC-C------------CCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 203 --NFPNYLQEAQRVLKPSGWLLIAEVKSRFD-P------------NTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 203 --~~~~~l~el~r~LkpgG~l~i~e~~~~~~-~------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
++..+++++.++|+|||.+++.++..... . ....++.+++..+++++||+++....
T Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 135 LENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 67799999999999999999987543220 0 11236889999999999999987543
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.70 E-value=7.1e-17 Score=141.31 Aligned_cols=127 Identities=22% Similarity=0.200 Sum_probs=102.1
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCC
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~ 187 (294)
.+..++..+.. .++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.++++ +
T Consensus 24 ~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~ 101 (256)
T 1nkv_A 24 KYATLGRVLRM-KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-N 101 (256)
T ss_dssp HHHHHHHHTCC-CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-S
T ss_pred HHHHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-C
Confidence 34556666543 367799999999999888776 3899999987 268899999999887 7
Q ss_pred CCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCC-------------CCCCCCHHHHHHHHHHCCCeE
Q 022592 188 SSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP-------------NTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~-------------~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
++||+|++..+++|. ++..+++++.++|+|||.+++.+......+ ....++..++..+++++||.+
T Consensus 102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 181 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDV 181 (256)
T ss_dssp SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCC
T ss_pred CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCee
Confidence 899999999999986 899999999999999999999864321111 112368899999999999998
Q ss_pred EEE
Q 022592 254 VSK 256 (294)
Q Consensus 254 ~~~ 256 (294)
+..
T Consensus 182 ~~~ 184 (256)
T 1nkv_A 182 VEM 184 (256)
T ss_dssp CEE
T ss_pred EEE
Confidence 764
No 33
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=2.4e-17 Score=145.89 Aligned_cols=132 Identities=20% Similarity=0.208 Sum_probs=98.4
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC--------------C------------------------------
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN--------------D------------------------------ 172 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~--------------~------------------------------ 172 (294)
++.+|||||||+|.++..++ ..|+|+|+|+. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 56789999999998776554 37999999962 1
Q ss_pred C-cEEEccCCC-CCCC---CCCccEEEEcccccCC-----CHHHHHHHHHHhcCcCcEEEEEeecCCC-C------CCCC
Q 022592 173 P-SVIACDMSN-TPLN---SSSVDVAVFCLSLMGI-----NFPNYLQEAQRVLKPSGWLLIAEVKSRF-D------PNTG 235 (294)
Q Consensus 173 ~-~~~~~d~~~-lp~~---~~~fD~Vi~~~~l~~~-----~~~~~l~el~r~LkpgG~l~i~e~~~~~-~------~~~~ 235 (294)
+ .++.+|+.. .|++ .++||+|+++.+|||. ++..++++++++|||||.|+++++.... . ....
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 1 178889887 3433 5789999999999972 3468999999999999999998754321 0 0112
Q ss_pred CCCHHHHHHHHHHCCCeEEEEecc----------CCeEEEEEEEECC
Q 022592 236 GADPNKFSKAVCDLGFAPVSKDFS----------NKMFIMFYFKKKE 272 (294)
Q Consensus 236 ~~~~~~~~~~l~~~Gf~~~~~~~~----------~~~f~~i~~~k~~ 272 (294)
.++.+++.++|+++||+++..... ...+.+++++|.+
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP 261 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred ccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecC
Confidence 368999999999999999885432 2256677777753
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.69 E-value=3.9e-17 Score=142.71 Aligned_cols=126 Identities=18% Similarity=0.281 Sum_probs=99.6
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC-------------CCCcEEEccCCCCCCCCCCccEEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAV 194 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD~Vi 194 (294)
++..+.. .++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+++++++||+|+
T Consensus 85 ~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 163 (254)
T 1xtp_A 85 FIASLPG-HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV 163 (254)
T ss_dssp HHHTSTT-CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred HHHhhcc-cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEE
Confidence 4444432 256799999999999998876 3699999987 257889999999998889999999
Q ss_pred EcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCCC-------CCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 195 FCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRFD-------PNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 195 ~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~-------~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
+..+++|. ++..++.++.++|+|||.+++.+...... .....++.+++..+|+++||+++....
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 99999996 36799999999999999999987422110 011125889999999999999988543
No 35
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.69 E-value=1.6e-16 Score=137.73 Aligned_cols=117 Identities=19% Similarity=0.192 Sum_probs=96.4
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++ ++++||+|+++.+++|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 34599999999999999887 3799999997 13789999999877 4568999999999998
Q ss_pred C---CHHHHHHHHHHhcCcCcEEEEEeecCCCCC--CCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 202 I---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDP--NTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 202 ~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~--~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
. ++..++.++.++|+|||.|++.++...... ....++.+++..+|+++||+++....
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 5 678999999999999999999876543222 11236899999999999999988554
No 36
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=1e-15 Score=127.60 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=105.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
..++..+. .++.+|||||||+|.++..++ ..++|+|+++ .++.++.+|+..+++++++||+|++.
T Consensus 37 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 37 ARLIDAMA--PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp HHHHHHHS--CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred HHHHHHhc--cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEEC
Confidence 34455442 356799999999999988886 4899999997 46889999999988888899999998
Q ss_pred -ccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc--------CCeEE
Q 022592 197 -LSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS--------NKMFI 264 (294)
Q Consensus 197 -~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~--------~~~f~ 264 (294)
.+++|. +...++.++.++|+|||.+++...... .++.+++..+++++||+++..... ...+.
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~------~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~ 188 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR------GWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFL 188 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS------SCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEE
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC------CcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEE
Confidence 677775 347899999999999999999754332 357899999999999999885432 33456
Q ss_pred EEEEEE
Q 022592 265 MFYFKK 270 (294)
Q Consensus 265 ~i~~~k 270 (294)
+++++|
T Consensus 189 ~~v~~k 194 (195)
T 3cgg_A 189 VAVFTK 194 (195)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 666655
No 37
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=1.5e-16 Score=141.46 Aligned_cols=126 Identities=15% Similarity=0.154 Sum_probs=102.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
..+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+..+|+ +++||+|++.
T Consensus 47 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~ 124 (279)
T 3ccf_A 47 EDLLQLLNPQ-PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSN 124 (279)
T ss_dssp CHHHHHHCCC-TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEE
T ss_pred HHHHHHhCCC-CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEc
Confidence 4456666543 66799999999999998886 4899999997 378999999999887 5789999999
Q ss_pred ccccC-CCHHHHHHHHHHhcCcCcEEEEEeecCCC----------------------CCCCCCCCHHHHHHHHHHCCCeE
Q 022592 197 LSLMG-INFPNYLQEAQRVLKPSGWLLIAEVKSRF----------------------DPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 197 ~~l~~-~~~~~~l~el~r~LkpgG~l~i~e~~~~~----------------------~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
.+++| .++..+++++.++|+|||.+++....... ......++.+++..+|+++||++
T Consensus 125 ~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 125 AMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred chhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 99999 48999999999999999999997654211 01112358899999999999998
Q ss_pred EEEe
Q 022592 254 VSKD 257 (294)
Q Consensus 254 ~~~~ 257 (294)
+...
T Consensus 205 ~~~~ 208 (279)
T 3ccf_A 205 TYAA 208 (279)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 38
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=8.7e-17 Score=139.97 Aligned_cols=117 Identities=17% Similarity=0.343 Sum_probs=95.3
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC---------------CCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN---------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~---------------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||||||+|.++..++ ..|+|+|+|+. ++.++.+|+..+++++++||+|++..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 46799999999999999876 37999999871 367899999998888889999999999999
Q ss_pred C-C--HHHHHHHHHHhcCcCcEEEEEeecCCC----CCCCC--CCCHHHHHHHHHHCCCeEEEEe
Q 022592 202 I-N--FPNYLQEAQRVLKPSGWLLIAEVKSRF----DPNTG--GADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 202 ~-~--~~~~l~el~r~LkpgG~l~i~e~~~~~----~~~~~--~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
. + ...+++++.++|+|||.+++.+..... ..... ..+.+++.++++++||+++...
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 6 3 348999999999999999998754321 11111 1378999999999999998854
No 39
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.68 E-value=6.4e-16 Score=132.29 Aligned_cols=141 Identities=14% Similarity=0.150 Sum_probs=107.2
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------C----------CCcEEEccCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------N----------DPSVIACDMSNTP 184 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------~----------~~~~~~~d~~~lp 184 (294)
+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ . ++.++.+|+...+
T Consensus 19 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSV-NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHT-TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhc-CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 3355555544 56799999999999998886 3899999997 1 7889999998888
Q ss_pred CCCCCccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeecCC---C----------CCCCCCCCHHHHH----H
Q 022592 185 LNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSR---F----------DPNTGGADPNKFS----K 244 (294)
Q Consensus 185 ~~~~~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~---~----------~~~~~~~~~~~~~----~ 244 (294)
+++++||+|++..+++|.+. ..+++++.++|+|||.+++...... + ......++.+++. .
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVK 177 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHH
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHH
Confidence 88889999999999999643 5899999999999997666542211 1 1111225888888 8
Q ss_pred HHHHCCCeEEEEec------cCCeEEEEEEEEC
Q 022592 245 AVCDLGFAPVSKDF------SNKMFIMFYFKKK 271 (294)
Q Consensus 245 ~l~~~Gf~~~~~~~------~~~~f~~i~~~k~ 271 (294)
+++++||++..... ......+.+|+|.
T Consensus 178 l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 178 VAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp HHHHHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred HHHHCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 89999998877532 3445678888875
No 40
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.68 E-value=1.5e-16 Score=139.47 Aligned_cols=145 Identities=22% Similarity=0.299 Sum_probs=107.1
Q ss_pred HHHHHHhHHhhhccCCCcHHHHHHHHhh----ccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC------------
Q 022592 110 FDMYHSGYQEQMSHWPELPVNIIVKWLK----DHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------ 170 (294)
Q Consensus 110 ~d~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------ 170 (294)
|+.....|.... ..+......+++.+. ...++.+|||||||+|.++..++ ..|+|+|+|+
T Consensus 5 ~~~~a~~y~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~ 83 (263)
T 2yqz_A 5 LLRAAYAYDRLR-AHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAG 83 (263)
T ss_dssp HHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTT
T ss_pred hHHHHHHHhhhc-ccChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc
Confidence 444444444333 223333445555552 22466799999999999998887 4899999986
Q ss_pred --CCCcEEEccCCCCCCCCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC---C--------------
Q 022592 171 --NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR---F-------------- 230 (294)
Q Consensus 171 --~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~---~-------------- 230 (294)
.++.++.+|+..+|+++++||+|++..+++|. ++..++.++.++|+|||.+++. +... .
T Consensus 84 ~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 2yqz_A 84 VDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAE 162 (263)
T ss_dssp SCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHH
Confidence 36789999999999988999999999999996 8999999999999999999987 3221 0
Q ss_pred -C-C---CCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 231 -D-P---NTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 231 -~-~---~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
. + ....++.+++..+|+++||.++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 163 EGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp HTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 0 0 001246678899999999997764
No 41
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=1.1e-16 Score=136.30 Aligned_cols=116 Identities=8% Similarity=0.061 Sum_probs=90.5
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------------------CCCcEEEccCCCCCCCC-CC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------------------NDPSVIACDMSNTPLNS-SS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------------------~~~~~~~~d~~~lp~~~-~~ 189 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++++|+.++++++ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 56799999999999999887 3899999996 14689999999998765 78
Q ss_pred ccEEEEcccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCC---CCCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 190 VDVAVFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRF---DPNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 190 fD~Vi~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~---~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
||+|++..+++|.+ ...+++++.++|||||.++++.+.... ......++.+++..++.. ||+++...
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 99999999998863 457899999999999985544332111 111112588999999988 99887643
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.67 E-value=2.2e-16 Score=142.52 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=103.6
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~ 197 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.+++++ ++||+|+++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 467799999999999999884 2899999987 1378999999999987 8999999999
Q ss_pred cccCC-CHHH---HHHHHHHhcCcCcEEEEEeecCCCCC------------------------------CCCCCCHHHHH
Q 022592 198 SLMGI-NFPN---YLQEAQRVLKPSGWLLIAEVKSRFDP------------------------------NTGGADPNKFS 243 (294)
Q Consensus 198 ~l~~~-~~~~---~l~el~r~LkpgG~l~i~e~~~~~~~------------------------------~~~~~~~~~~~ 243 (294)
+++|. ++.. +++++.++|+|||.+++.++...... ....++.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 99995 6654 79999999999999999875431110 00226899999
Q ss_pred HHHHHCCCeEEEEec-cCCeEEEEEEEEC
Q 022592 244 KAVCDLGFAPVSKDF-SNKMFIMFYFKKK 271 (294)
Q Consensus 244 ~~l~~~Gf~~~~~~~-~~~~f~~i~~~k~ 271 (294)
.+|+++||+++.... ....+.+++++|.
T Consensus 276 ~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 999999999988663 3445556666653
No 43
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=1.3e-16 Score=137.22 Aligned_cols=117 Identities=21% Similarity=0.279 Sum_probs=97.6
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------------------CCcEEEccCCCCCCCCCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------------DPSVIACDMSNTPLNSSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------------------~~~~~~~d~~~lp~~~~~fD~Vi~~~ 197 (294)
++.+|||||||+|.++..++ ..|+|+|+++. ++.++.+|+..+++++++||+|++..
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 56799999999999998887 48999999871 35789999999999899999999999
Q ss_pred cccCC-CHH---HHHHHHHHhcCcCcEEEEEeecCCCCC--------------------------------CCCCCCHHH
Q 022592 198 SLMGI-NFP---NYLQEAQRVLKPSGWLLIAEVKSRFDP--------------------------------NTGGADPNK 241 (294)
Q Consensus 198 ~l~~~-~~~---~~l~el~r~LkpgG~l~i~e~~~~~~~--------------------------------~~~~~~~~~ 241 (294)
+++|. ++. .+++++.++|+|||.+++.++...... ....++.++
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKE 189 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHH
Confidence 99996 666 899999999999999999876432100 011368999
Q ss_pred HHHHHHHCCCeEEEEe
Q 022592 242 FSKAVCDLGFAPVSKD 257 (294)
Q Consensus 242 ~~~~l~~~Gf~~~~~~ 257 (294)
+..+|+++||+++.+.
T Consensus 190 l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 190 LVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHTTTEEEEEEE
T ss_pred HHHHHHHcCCEEEEEE
Confidence 9999999999998843
No 44
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.67 E-value=1.3e-16 Score=141.35 Aligned_cols=119 Identities=18% Similarity=0.333 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+++++++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 467899999999999988876 3799999986 36789999999999989999999999999
Q ss_pred cCC-CHHHHHHHHHHhcCcCcEEEEEeecCCC---CC-------------------CCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 200 MGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRF---DP-------------------NTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 200 ~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~---~~-------------------~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+|. ++..++.++.++|+|||.+++.+..... .+ ....++...+..+|+++||+++.+
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~ 195 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRV 195 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEE
Confidence 995 8899999999999999999998743211 01 111245578899999999999876
Q ss_pred ec
Q 022592 257 DF 258 (294)
Q Consensus 257 ~~ 258 (294)
..
T Consensus 196 ~~ 197 (276)
T 3mgg_A 196 EP 197 (276)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 45
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.66 E-value=3.2e-16 Score=140.00 Aligned_cols=129 Identities=20% Similarity=0.269 Sum_probs=100.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC--------------CCCcEEEccCCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~ 189 (294)
..++..+....++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+.+++++ ++
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~ 89 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DK 89 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SC
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CC
Confidence 4445555444467899999999999998886 3799999997 1678999999998884 68
Q ss_pred ccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeec-----CCCCC-------------------------CCCCCC
Q 022592 190 VDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVK-----SRFDP-------------------------NTGGAD 238 (294)
Q Consensus 190 fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~-----~~~~~-------------------------~~~~~~ 238 (294)
||+|++..+++|. ++..+++++.++|+|||++++.+.. ..+.. ......
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNI 169 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTG
T ss_pred eeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccH
Confidence 9999999999995 8999999999999999999998765 11100 011134
Q ss_pred HHHHHHHHHHCCCeEEEEecc
Q 022592 239 PNKFSKAVCDLGFAPVSKDFS 259 (294)
Q Consensus 239 ~~~~~~~l~~~Gf~~~~~~~~ 259 (294)
...+..+|+++||..+.....
T Consensus 170 ~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 170 GMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp GGTHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEc
Confidence 567889999999988876443
No 46
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.66 E-value=2.1e-15 Score=138.73 Aligned_cols=137 Identities=14% Similarity=0.079 Sum_probs=105.5
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhcc-----ceEEEeccC-------------CCCcEEEccCCCCCCCCCCcc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
..+++.+... ++.+|||||||+|.++..++. .++++|++. .++.++.+|+. .+++ +||
T Consensus 174 ~~~~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D 249 (348)
T 3lst_A 174 LILARAGDFP-ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HAD 249 (348)
T ss_dssp HHHHHHSCCC-SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCS
T ss_pred HHHHHhCCcc-CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCc
Confidence 3455555432 567999999999999988862 688999863 35789999996 4444 799
Q ss_pred EEEEcccccCC-CH--HHHHHHHHHhcCcCcEEEEEeecCCCC----------------CCCCCCCHHHHHHHHHHCCCe
Q 022592 192 VAVFCLSLMGI-NF--PNYLQEAQRVLKPSGWLLIAEVKSRFD----------------PNTGGADPNKFSKAVCDLGFA 252 (294)
Q Consensus 192 ~Vi~~~~l~~~-~~--~~~l~el~r~LkpgG~l~i~e~~~~~~----------------~~~~~~~~~~~~~~l~~~Gf~ 252 (294)
+|++..+|||. +. ..++++++++|+|||.|+|.+...... .....++.+++..+++++||+
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 329 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLR 329 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCc
Confidence 99999999986 33 599999999999999999987532211 111236899999999999999
Q ss_pred EEEEeccCCeEEEEEEEE
Q 022592 253 PVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 253 ~~~~~~~~~~f~~i~~~k 270 (294)
++.+......+.++++++
T Consensus 330 ~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 330 LDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEEEEECSSSCEEEEEEE
T ss_pred eEEEEECCCCcEEEEEEe
Confidence 999776667777887765
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.66 E-value=4.9e-16 Score=144.88 Aligned_cols=115 Identities=23% Similarity=0.307 Sum_probs=96.4
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC-----------------------CCCcEEEccCCCC------CC
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------------------NDPSVIACDMSNT------PL 185 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-----------------------~~~~~~~~d~~~l------p~ 185 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 66799999999999887775 2799999986 2678999999987 88
Q ss_pred CCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCC--------------CCCCCCCHHHHHHHHHHCC
Q 022592 186 NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFD--------------PNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~--------------~~~~~~~~~~~~~~l~~~G 250 (294)
++++||+|+++.+++|. ++..+++++.++|+|||+|++.++..... .....++.+++..+|+++|
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 89999999999999995 89999999999999999999987543211 1122367899999999999
Q ss_pred CeEEE
Q 022592 251 FAPVS 255 (294)
Q Consensus 251 f~~~~ 255 (294)
|.++.
T Consensus 243 F~~v~ 247 (383)
T 4fsd_A 243 FRDVR 247 (383)
T ss_dssp CCCEE
T ss_pred CceEE
Confidence 98775
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=6.1e-16 Score=132.65 Aligned_cols=129 Identities=17% Similarity=0.252 Sum_probs=100.8
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEccccc--C
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM--G 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~--~ 201 (294)
++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..+++++++||+|++..+++ +
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 46799999999999988876 3899999987 468899999999888888999999999954 3
Q ss_pred C-CHHHHHHHHHHhcCcCcEEEEEeecCC------C----------C----CCCCC--------------------CCHH
Q 022592 202 I-NFPNYLQEAQRVLKPSGWLLIAEVKSR------F----------D----PNTGG--------------------ADPN 240 (294)
Q Consensus 202 ~-~~~~~l~el~r~LkpgG~l~i~e~~~~------~----------~----~~~~~--------------------~~~~ 240 (294)
. ++..++.++.++|+|||.+++.+.... . . +.... +. .
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~ 196 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVWG-K 196 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECCC-H
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhhc-h
Confidence 2 677999999999999999999864310 0 0 00000 12 4
Q ss_pred HHHHHHHHCCCeEEEEeccCCeEEEEEEEE
Q 022592 241 KFSKAVCDLGFAPVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 241 ~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k 270 (294)
++.++|+++||..+.......+.+++++.+
T Consensus 197 ~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 197 TGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp HHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 788999999999999776666667777765
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=4.8e-16 Score=136.07 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=98.7
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEE
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
.++..+... ++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..++ ++++||+|++
T Consensus 24 ~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~ 101 (259)
T 2p35_A 24 DLLAQVPLE-RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYA 101 (259)
T ss_dssp HHHTTCCCS-CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEE
T ss_pred HHHHhcCCC-CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEE
Confidence 344444333 56799999999999988775 3799999997 47899999999988 7889999999
Q ss_pred cccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC----------------CC--------CCCCCCCHHHHHHHHHHCC
Q 022592 196 CLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR----------------FD--------PNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 196 ~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~----------------~~--------~~~~~~~~~~~~~~l~~~G 250 (294)
+.+++|. ++..++.++.++|+|||.+++...... +. .....++.+++..+|+++|
T Consensus 102 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 181 (259)
T 2p35_A 102 NAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKS 181 (259)
T ss_dssp ESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGE
T ss_pred eCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcC
Confidence 9999996 899999999999999999999864321 10 0223468999999999999
Q ss_pred CeEEE
Q 022592 251 FAPVS 255 (294)
Q Consensus 251 f~~~~ 255 (294)
|.+..
T Consensus 182 f~v~~ 186 (259)
T 2p35_A 182 SRVDV 186 (259)
T ss_dssp EEEEE
T ss_pred CceEE
Confidence 97544
No 50
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=7.6e-16 Score=131.89 Aligned_cols=127 Identities=16% Similarity=0.237 Sum_probs=100.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC--------CCCcEEEccCCC--CCCCCCCccEEEEc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------NDPSVIACDMSN--TPLNSSSVDVAVFC 196 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------~~~~~~~~d~~~--lp~~~~~fD~Vi~~ 196 (294)
..+++.+. .++.+|||||||+|.++..++ ..++|+|+++ ....+..+|+.. .++++++||+|++.
T Consensus 23 ~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 23 PNLLKHIK--KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp HHHHTTCC--TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred HHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEEC
Confidence 33455444 366799999999999998887 3899999987 234688899876 67778899999999
Q ss_pred ccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC------------CC---------CCCCCCCHHHHHHHHHHCCCeEE
Q 022592 197 LSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR------------FD---------PNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 197 ~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~------------~~---------~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
.+++|. ++..++.++.++|+|||.+++...... +. .....++.+++..+++++||+++
T Consensus 101 ~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 180 (230)
T 3cc8_A 101 DVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSIS 180 (230)
T ss_dssp SCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEE
Confidence 999995 889999999999999999999864321 11 11233789999999999999998
Q ss_pred EEec
Q 022592 255 SKDF 258 (294)
Q Consensus 255 ~~~~ 258 (294)
....
T Consensus 181 ~~~~ 184 (230)
T 3cc8_A 181 KVDR 184 (230)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8544
No 51
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.65 E-value=9.7e-16 Score=135.11 Aligned_cols=116 Identities=14% Similarity=0.095 Sum_probs=90.7
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC---------C-----------------------CCcEEEccCCCCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------N-----------------------DPSVIACDMSNTPL 185 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------~-----------------------~~~~~~~d~~~lp~ 185 (294)
++.+|||+|||+|.++..|+ ..|+|+|+|+ . ++.++++|+..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 56799999999999999887 3899999997 1 25788999999887
Q ss_pred CC-CCccEEEEcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCC-C--CCCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 186 NS-SSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSR-F--DPNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 186 ~~-~~fD~Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~-~--~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
++ ++||+|++..+|++. +...+++++.++|+|||.++++.+... . ......++.+++..++.. +|+++...
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 64 899999999999885 356899999999999999976543211 1 111112688999999987 59887643
No 52
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.65 E-value=1.3e-15 Score=135.77 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=94.7
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~ 200 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+.++| ++||+|++..+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 66799999999999988776 3899999986 26788899998766 7899999999999
Q ss_pred CC---CHHHHHHHHHHhcCcCcEEEEEeecCCC--------------------------CCCCCCCCHHHHHHHHHHCCC
Q 022592 201 GI---NFPNYLQEAQRVLKPSGWLLIAEVKSRF--------------------------DPNTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 201 ~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~--------------------------~~~~~~~~~~~~~~~l~~~Gf 251 (294)
|. ++..+++++.++|+|||.+++.++.... .+....++.+++..+++++||
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 220 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGF 220 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTC
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCc
Confidence 95 6789999999999999999998754311 111223589999999999999
Q ss_pred eEEEEec
Q 022592 252 APVSKDF 258 (294)
Q Consensus 252 ~~~~~~~ 258 (294)
+++....
T Consensus 221 ~~~~~~~ 227 (287)
T 1kpg_A 221 TVTRVQS 227 (287)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9988643
No 53
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.64 E-value=7.1e-16 Score=137.94 Aligned_cols=128 Identities=16% Similarity=0.259 Sum_probs=93.3
Q ss_pred HHHHHHhhcc-CCCCEEEEEcCcccHHHHHhc----cceEEEeccCCC--------------------------------
Q 022592 130 NIIVKWLKDH-SPSLVIADFGCGDARLAKSVK----NKVFSFDLVSND-------------------------------- 172 (294)
Q Consensus 130 ~~~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~~-------------------------------- 172 (294)
..+.+.+... .++.+|||||||+|.++..++ ..|+|+|+|+..
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 138 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGE 138 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCccc
Confidence 3455555432 256799999999999554433 389999999721
Q ss_pred -------------CcEEEccCCC-CCC-----CCCCccEEEEcccccC----C-CHHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 173 -------------PSVIACDMSN-TPL-----NSSSVDVAVFCLSLMG----I-NFPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 173 -------------~~~~~~d~~~-lp~-----~~~~fD~Vi~~~~l~~----~-~~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
+.++.+|+.. +|+ ++++||+|+++.+|+| . ++..+++++.++|||||.|++.+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~ 218 (289)
T 2g72_A 139 CWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALE 218 (289)
T ss_dssp CHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEES
T ss_pred chhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 1245558877 664 3467999999999998 3 57899999999999999999975332
Q ss_pred C-CC---C---CCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 229 R-FD---P---NTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 229 ~-~~---~---~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
. +. . ....++.+++..+|+++||+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 219 ESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 1 10 0 1234689999999999999988743
No 54
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.64 E-value=1.2e-15 Score=137.27 Aligned_cols=124 Identities=13% Similarity=0.127 Sum_probs=98.6
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCcc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
++..+.. .++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.++ +++||
T Consensus 64 ~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD 139 (302)
T 3hem_A 64 ALDKLNL-EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVD 139 (302)
T ss_dssp HHHTTCC-CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCS
T ss_pred HHHHcCC-CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCcc
Confidence 4444433 367799999999999988876 3799999997 2578999999876 68899
Q ss_pred EEEEcccccCC-CH---------HHHHHHHHHhcCcCcEEEEEeecCCC--------------------------CCCCC
Q 022592 192 VAVFCLSLMGI-NF---------PNYLQEAQRVLKPSGWLLIAEVKSRF--------------------------DPNTG 235 (294)
Q Consensus 192 ~Vi~~~~l~~~-~~---------~~~l~el~r~LkpgG~l~i~e~~~~~--------------------------~~~~~ 235 (294)
+|++..+++|. ++ ..+++++.++|+|||.+++.++.... .+...
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 219 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGR 219 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCC
T ss_pred EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCC
Confidence 99999999995 44 69999999999999999998764321 12223
Q ss_pred CCCHHHHHHHHHHCCCeEEEEecc
Q 022592 236 GADPNKFSKAVCDLGFAPVSKDFS 259 (294)
Q Consensus 236 ~~~~~~~~~~l~~~Gf~~~~~~~~ 259 (294)
..+.+++..+++++||+++.....
T Consensus 220 ~~s~~~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 220 LPRISQVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEEC
T ss_pred CCCHHHHHHHHHhCCcEEEEEEeC
Confidence 468899999999999999886543
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=1.7e-15 Score=127.16 Aligned_cols=125 Identities=19% Similarity=0.266 Sum_probs=98.9
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCCCCCCcc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
..+++.+... ++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..+++ +++||
T Consensus 22 ~~l~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 22 SEVLEAVKVV-KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHHHTTTS-CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEE
T ss_pred HHHHHHhhcc-CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCce
Confidence 3455666554 56799999999999998887 3899999987 267899999999888 78999
Q ss_pred EEEEcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCCC-C----CCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 192 VAVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRFD-P----NTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 192 ~Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~-~----~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
+|++..+++|. ++..++.++.++|+|||.+++.+...... + ....++.+++.++++. |+++....
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecc
Confidence 99999999985 57899999999999999988876443211 1 1123588899999986 99988544
No 56
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.64 E-value=1.6e-15 Score=131.42 Aligned_cols=83 Identities=28% Similarity=0.363 Sum_probs=71.8
Q ss_pred CCCEEEEEcCcccHHHHHhc--cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEcc-cccCC-
Q 022592 141 PSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCL-SLMGI- 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~--~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~-~l~~~- 202 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++++ ++||+|++.. +++|.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 111 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQ 111 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcC
Confidence 55799999999999998887 4799999987 3678999999988876 7899999986 88885
Q ss_pred ---CHHHHHHHHHHhcCcCcEEEEE
Q 022592 203 ---NFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 203 ---~~~~~l~el~r~LkpgG~l~i~ 224 (294)
+...+++++.++|+|||.+++.
T Consensus 112 ~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 112 TEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 4568899999999999999984
No 57
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.64 E-value=2e-15 Score=129.17 Aligned_cols=126 Identities=14% Similarity=0.163 Sum_probs=98.2
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------C----------CCcEEEccCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------N----------DPSVIACDMSNTP 184 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------~----------~~~~~~~d~~~lp 184 (294)
+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ . ++.++.+|+...+
T Consensus 19 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 19 NGVVAALKQS-NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHT-TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHhc-CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 3455555544 56799999999999998886 3899999997 1 6889999998888
Q ss_pred CCCCCccEEEEcccccCCC-H--HHHHHHHHHhcCcCcEEEEEeecCC---C----------CCCCCCCCHHHHH----H
Q 022592 185 LNSSSVDVAVFCLSLMGIN-F--PNYLQEAQRVLKPSGWLLIAEVKSR---F----------DPNTGGADPNKFS----K 244 (294)
Q Consensus 185 ~~~~~fD~Vi~~~~l~~~~-~--~~~l~el~r~LkpgG~l~i~e~~~~---~----------~~~~~~~~~~~~~----~ 244 (294)
.+.++||+|++..+++|.+ + ..+++++.++|+|||.++++..... + ......++.+++. .
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANK 177 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHH
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHH
Confidence 7778999999999999963 2 6899999999999997777643211 1 1112236888888 8
Q ss_pred HHHHCCCeEEEE
Q 022592 245 AVCDLGFAPVSK 256 (294)
Q Consensus 245 ~l~~~Gf~~~~~ 256 (294)
+++++||+++..
T Consensus 178 ~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 178 ITERFAYNVQFQ 189 (217)
T ss_dssp HHHHSSEEEEEC
T ss_pred HHHHcCceEEEE
Confidence 999999998774
No 58
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.64 E-value=3.9e-16 Score=140.33 Aligned_cols=139 Identities=15% Similarity=0.174 Sum_probs=103.8
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC------------------CCCcEEEccCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------------~~~~~~~~d~~~lp~~~ 187 (294)
+..++..+.. ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+..+++ +
T Consensus 72 ~~~~~~~~~~--~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~ 148 (299)
T 3g2m_A 72 AREFATRTGP--VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-D 148 (299)
T ss_dssp HHHHHHHHCC--CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-S
T ss_pred HHHHHHhhCC--CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-C
Confidence 3455666543 33489999999999999887 3899999997 247899999999987 6
Q ss_pred CCccEEEEc-ccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCC-----C--------------------------
Q 022592 188 SSVDVAVFC-LSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFD-----P-------------------------- 232 (294)
Q Consensus 188 ~~fD~Vi~~-~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~-----~-------------------------- 232 (294)
++||+|++. .++++.+ ...+++++.++|+|||.|++..+..... .
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQ 228 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEE
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEE
Confidence 889998865 5566665 5799999999999999999976443210 0
Q ss_pred ----------C---------CCCCCHHHHHHHHHHCCCeEEEEecc------CCeEEEEEEEE
Q 022592 233 ----------N---------TGGADPNKFSKAVCDLGFAPVSKDFS------NKMFIMFYFKK 270 (294)
Q Consensus 233 ----------~---------~~~~~~~~~~~~l~~~Gf~~~~~~~~------~~~f~~i~~~k 270 (294)
. ...++.+++..+|+++||+++..... ...+.+++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 229 EITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp EEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred EEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 0 00259999999999999999985432 23455665544
No 59
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.64 E-value=7e-15 Score=136.23 Aligned_cols=138 Identities=16% Similarity=0.196 Sum_probs=107.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
..++..+....+..+|||||||+|.++..++ ..++++|+.. .++.++.+|+.. |++.+ |+|++.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~ 266 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMK 266 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEeh
Confidence 4455555423356799999999999998886 2689999843 478899999987 77754 999999
Q ss_pred ccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCC---------------------CCCCCCCHHHHHHHHHHCCCe
Q 022592 197 LSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFD---------------------PNTGGADPNKFSKAVCDLGFA 252 (294)
Q Consensus 197 ~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~---------------------~~~~~~~~~~~~~~l~~~Gf~ 252 (294)
.+||+.+ ...+|++++++|+|||+|+|.|...... .....++.+++..+|+++||+
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~ 346 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFT 346 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCC
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCc
Confidence 9999753 4588999999999999999987542111 122236889999999999999
Q ss_pred EEEEeccCCeEEEEEEEE
Q 022592 253 PVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 253 ~~~~~~~~~~f~~i~~~k 270 (294)
++........+.++++.|
T Consensus 347 ~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 347 GVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp EEEEEEEETTEEEEEEEC
T ss_pred eEEEEEcCCceEEEEEeC
Confidence 999777667777887754
No 60
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.63 E-value=5.6e-16 Score=131.80 Aligned_cols=108 Identities=16% Similarity=0.230 Sum_probs=92.6
Q ss_pred CCCEEEEEcCcccHHHHHhcc-ceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-CHHHHH
Q 022592 141 PSLVIADFGCGDARLAKSVKN-KVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFPNYL 208 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~-~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~~~l 208 (294)
++.+|||||||+|.++..+.. .++|+|+|+ .++.++.+|+..+|+++++||+|++..+++|. ++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l 115 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVL 115 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHH
Confidence 567999999999999998865 899999997 37889999999999988999999999999995 899999
Q ss_pred HHHHHhcCcCcEEEEEeecCCCC----------------CCCCCCCHHHHHHHHHHCC
Q 022592 209 QEAQRVLKPSGWLLIAEVKSRFD----------------PNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 209 ~el~r~LkpgG~l~i~e~~~~~~----------------~~~~~~~~~~~~~~l~~~G 250 (294)
+++.++|+|||.+++.++..... .....++.+++..+|+ |
T Consensus 116 ~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 116 LEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred HHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999999999999987654210 1233479999999998 7
No 61
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.63 E-value=9.2e-15 Score=135.60 Aligned_cols=128 Identities=17% Similarity=0.174 Sum_probs=101.8
Q ss_pred CCCEEEEEcCcccHHHHHhcc-----ceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEcccccCCC---H
Q 022592 141 PSLVIADFGCGDARLAKSVKN-----KVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGIN---F 204 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~---~ 204 (294)
+..+|||||||+|.++..++. +++++|+.. .++.++.+|+.+ |++.+ |+|++..+||+.+ .
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~ 279 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHC 279 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHH
Confidence 457999999999999988862 689999843 478899999987 67654 9999999999753 3
Q ss_pred HHHHHHHHHhcCcCcEEEEEeecCCCC---------------------CCCCCCCHHHHHHHHHHCCCeEEEEeccCCeE
Q 022592 205 PNYLQEAQRVLKPSGWLLIAEVKSRFD---------------------PNTGGADPNKFSKAVCDLGFAPVSKDFSNKMF 263 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e~~~~~~---------------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f 263 (294)
..+|++++++|+|||+|+|.|+..... .....++.+++..+|+++||+++.+......+
T Consensus 280 ~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~ 359 (368)
T 3reo_A 280 LKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNT 359 (368)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTE
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCc
Confidence 478999999999999999988543211 11223688999999999999999977666677
Q ss_pred EEEEEEEC
Q 022592 264 IMFYFKKK 271 (294)
Q Consensus 264 ~~i~~~k~ 271 (294)
.++++.|.
T Consensus 360 ~vie~~k~ 367 (368)
T 3reo_A 360 YVMEFLKT 367 (368)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 78887664
No 62
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.63 E-value=1.6e-15 Score=128.48 Aligned_cols=128 Identities=14% Similarity=0.202 Sum_probs=100.7
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHH-HHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCC
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLA-KSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~-~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~ 189 (294)
.+..++..+....++.+|||+|||+|.++ ..++ ..|+|+|+|+ .++.++.+|+..+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (209)
T 2p8j_A 10 QLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDES 89 (209)
T ss_dssp HHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTC
T ss_pred hHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCc
Confidence 34556666666556789999999999873 3333 4899999987 3688999999999988899
Q ss_pred ccEEEEcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC-----------------C----CCCCHHHHHHH
Q 022592 190 VDVAVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN-----------------T----GGADPNKFSKA 245 (294)
Q Consensus 190 fD~Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~-----------------~----~~~~~~~~~~~ 245 (294)
||+|++..+++|. ++..+++++.++|+|||.+++.++....... . ..++.+++..+
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 169 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKY 169 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHT
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHH
Confidence 9999999999986 5679999999999999999998764321110 0 12588899999
Q ss_pred HHHCCCeEEE
Q 022592 246 VCDLGFAPVS 255 (294)
Q Consensus 246 l~~~Gf~~~~ 255 (294)
+..+||....
T Consensus 170 ~~~~g~~~~~ 179 (209)
T 2p8j_A 170 FKDMKVLFKE 179 (209)
T ss_dssp TTTSEEEEEE
T ss_pred HhhcCceeee
Confidence 9999987665
No 63
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.63 E-value=1.3e-14 Score=134.62 Aligned_cols=138 Identities=12% Similarity=0.125 Sum_probs=106.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhcc-----ceEEEeccC---------------CCCcEEEccCCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVS---------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~ 189 (294)
..++..+... +..+|||||||+|.++..++. .++++|+.. .++.++.+|+. .+++. .
T Consensus 192 ~~l~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 192 GQVAAAYDFS-GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHHHSCCT-TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-S
T ss_pred HHHHHhCCCc-cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-C
Confidence 3444444322 457999999999999988862 789999822 35889999998 56665 7
Q ss_pred ccEEEEcccccCCCHH---HHHHHHHHhcCcCcEEEEEeecCCCCC---------------CCCCCCHHHHHHHHHHCCC
Q 022592 190 VDVAVFCLSLMGINFP---NYLQEAQRVLKPSGWLLIAEVKSRFDP---------------NTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~---~~l~el~r~LkpgG~l~i~e~~~~~~~---------------~~~~~~~~~~~~~l~~~Gf 251 (294)
||+|++..+||+.+.. .+++++.++|+|||.|+|.+....... ....++.+++..+++++||
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTE
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCC
Confidence 9999999999986433 799999999999999999875432211 1123688999999999999
Q ss_pred eEEEEec-cCCeEEEEEEEE
Q 022592 252 APVSKDF-SNKMFIMFYFKK 270 (294)
Q Consensus 252 ~~~~~~~-~~~~f~~i~~~k 270 (294)
+++.+.. ....+.++++++
T Consensus 349 ~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 349 RVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEEECSSSSEEEEEEEE
T ss_pred eEEEEEECCCCCcEEEEEEe
Confidence 9999766 567788888875
No 64
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.62 E-value=2.6e-14 Score=130.29 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=105.7
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~ 187 (294)
...++..+... + .+|||||||+|.++..++ ..++++|+ + .++.++.+|+.. +++
T Consensus 157 ~~~~~~~~~~~-~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 157 FHEIPRLLDFR-G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHSCCT-T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHhCCCC-C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 34455555333 3 799999999999988886 26999999 6 257889999977 555
Q ss_pred CCccEEEEcccccCC-CH--HHHHHHHHHhcCcCcEEEEEeecCCCCC----------------CCCCCCHHHHHHHHHH
Q 022592 188 SSVDVAVFCLSLMGI-NF--PNYLQEAQRVLKPSGWLLIAEVKSRFDP----------------NTGGADPNKFSKAVCD 248 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~-~~--~~~l~el~r~LkpgG~l~i~e~~~~~~~----------------~~~~~~~~~~~~~l~~ 248 (294)
++||+|++..++|+. +. ..+++++.++|+|||.+++.+....... ....++.+++.+++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHH
Confidence 679999999999975 33 3899999999999999999975421110 1123588999999999
Q ss_pred CCCeEEEEeccCCeEEEEEEEEC
Q 022592 249 LGFAPVSKDFSNKMFIMFYFKKK 271 (294)
Q Consensus 249 ~Gf~~~~~~~~~~~f~~i~~~k~ 271 (294)
+||+++........+.+++++|.
T Consensus 312 aGf~~~~~~~~~~~~~~i~~~~~ 334 (334)
T 2ip2_A 312 GGFAVERIVDLPMETRMIVAARA 334 (334)
T ss_dssp TTEEEEEEEEETTTEEEEEEEEC
T ss_pred CCCceeEEEECCCCCEEEEEEeC
Confidence 99999886655566788888763
No 65
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.62 E-value=5.9e-15 Score=134.37 Aligned_cols=140 Identities=14% Similarity=0.194 Sum_probs=106.6
Q ss_pred HHHHHHHhhc-cCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCC
Q 022592 129 VNIIVKWLKD-HSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 129 ~~~~~~~l~~-~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~ 187 (294)
...++..+.. ..+..+|||||||+|.++..++ .+++++|++. .++.++.+|+...+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 231 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGN 231 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCC
Confidence 3445555543 0256799999999999988876 2799999983 24789999998877765
Q ss_pred CCccEEEEcccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCC------------------CCCCCCCHHHHHHHH
Q 022592 188 SSVDVAVFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFD------------------PNTGGADPNKFSKAV 246 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~------------------~~~~~~~~~~~~~~l 246 (294)
+ ||+|++..++++.+ ...+++++.++|+|||.+++.++..... +....++.+++.+++
T Consensus 232 ~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll 310 (335)
T 2r3s_A 232 D-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMF 310 (335)
T ss_dssp C-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred C-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHH
Confidence 5 99999999999863 3589999999999999999988653221 123347899999999
Q ss_pred HHCCCeEEEEeccCCeEEEEEEE
Q 022592 247 CDLGFAPVSKDFSNKMFIMFYFK 269 (294)
Q Consensus 247 ~~~Gf~~~~~~~~~~~f~~i~~~ 269 (294)
+++||+++........+.+++.+
T Consensus 311 ~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 311 SNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHCCCCeeeEEECCCCceeEEEe
Confidence 99999999866554444555443
No 66
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.62 E-value=1.9e-15 Score=135.01 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=78.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------------CCCcEEEccCCCCC---
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------------NDPSVIACDMSNTP--- 184 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------------~~~~~~~~d~~~lp--- 184 (294)
..+...+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+..++
T Consensus 47 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQH-GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHT-TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhccc-CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 3344555444 56799999999999998887 3899999997 24557888988887
Q ss_pred CCCCCccEEEEc-ccccCC-C-------HHHHHHHHHHhcCcCcEEEEEe
Q 022592 185 LNSSSVDVAVFC-LSLMGI-N-------FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 185 ~~~~~fD~Vi~~-~~l~~~-~-------~~~~l~el~r~LkpgG~l~i~e 225 (294)
+++++||+|++. .+++|. + +..+++++.++|+|||+|++..
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 788999999998 899884 7 8899999999999999999874
No 67
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.62 E-value=1.4e-15 Score=133.50 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=100.7
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC------------C--------------------------------
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN------------D-------------------------------- 172 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~------------~-------------------------------- 172 (294)
++.+|||||||+|.++..++ ..|+|+|+|+. .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 55689999999999988776 27999999971 1
Q ss_pred C-cEEEccCCCCC-CCC---CCccEEEEccccc----CC-CHHHHHHHHHHhcCcCcEEEEEeecCCCC-------CCCC
Q 022592 173 P-SVIACDMSNTP-LNS---SSVDVAVFCLSLM----GI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFD-------PNTG 235 (294)
Q Consensus 173 ~-~~~~~d~~~lp-~~~---~~fD~Vi~~~~l~----~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~-------~~~~ 235 (294)
+ .++.+|+...+ +++ ++||+|++..+++ +. ++..++.++.++|+|||.|++.++..... ....
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 5 78899998754 355 7899999999999 42 67899999999999999999987543110 0112
Q ss_pred CCCHHHHHHHHHHCCCeEEEEeccC----------CeEEEEEEEECC
Q 022592 236 GADPNKFSKAVCDLGFAPVSKDFSN----------KMFIMFYFKKKE 272 (294)
Q Consensus 236 ~~~~~~~~~~l~~~Gf~~~~~~~~~----------~~f~~i~~~k~~ 272 (294)
.++.+++..+|+++||+++...... ..+.+++++|..
T Consensus 216 ~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 262 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPG 262 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC
T ss_pred ccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEecccc
Confidence 3688999999999999998855422 245566666653
No 68
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.62 E-value=1.7e-14 Score=131.53 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=100.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~ 200 (294)
+..+|||||||+|.++..++ ..++++|+.. .++.++.+|+. .+++. +||+|++..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh 246 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLH 246 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhc
Confidence 34699999999999998886 2689999832 35889999997 45555 799999999999
Q ss_pred CCCH---HHHHHHHHHhcCcCcEEEEEeecCCCC-------------CCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEE
Q 022592 201 GINF---PNYLQEAQRVLKPSGWLLIAEVKSRFD-------------PNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFI 264 (294)
Q Consensus 201 ~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~~-------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~ 264 (294)
+.+. ..++++++++|+|||+|+|.+...... .....++.+++..+++++||+++....... +.
T Consensus 247 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~ 325 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VS 325 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cE
Confidence 8643 789999999999999999988543221 011236899999999999999998766556 88
Q ss_pred EEEEEE
Q 022592 265 MFYFKK 270 (294)
Q Consensus 265 ~i~~~k 270 (294)
++++++
T Consensus 326 vie~r~ 331 (332)
T 3i53_A 326 IVEMTA 331 (332)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 888875
No 69
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.61 E-value=1.7e-15 Score=135.13 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=94.4
Q ss_pred CCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCC-CCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPL-NSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~-~~~~fD~Vi~~~~ 198 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+++ ++++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 366799999999999887775 3899999997 136889999999888 5789999999999
Q ss_pred ccC--C---CHHHHHHHHHHhcCcCcEEEEEeecCC------------------------CCCC----------------
Q 022592 199 LMG--I---NFPNYLQEAQRVLKPSGWLLIAEVKSR------------------------FDPN---------------- 233 (294)
Q Consensus 199 l~~--~---~~~~~l~el~r~LkpgG~l~i~e~~~~------------------------~~~~---------------- 233 (294)
++| . ++..+++++.++|+|||.+++...... ..+.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 222 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNN 222 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSS
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcC
Confidence 987 2 567899999999999999999754310 0010
Q ss_pred --CCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 234 --TGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 234 --~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
...++.+++..+++++||+++...
T Consensus 223 ~~~~~~~~~~l~~ll~~aGf~~v~~~ 248 (298)
T 1ri5_A 223 CIEYFVDFTRMVDGFKRLGLSLVERK 248 (298)
T ss_dssp EEEECCCHHHHHHHHHTTTEEEEEEE
T ss_pred CcccccCHHHHHHHHHHcCCEEEEec
Confidence 012588999999999999998843
No 70
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.61 E-value=2.1e-14 Score=118.71 Aligned_cols=135 Identities=15% Similarity=0.212 Sum_probs=103.2
Q ss_pred CcHHHHHHHHhhcc-CCCCEEEEEcCcccHHHHHhcc--ceEEEeccC------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 126 ELPVNIIVKWLKDH-SPSLVIADFGCGDARLAKSVKN--KVFSFDLVS------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 126 ~~~~~~~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~~--~v~gvD~s~------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
......+++.+... .++.+|||+|||+|.++..++. .|+|+|+|+ .++.++.+|+.. ++++++||+|+++
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n 85 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFN 85 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEEC
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEEC
Confidence 33445566665541 2567999999999999998874 799999997 578899999987 6667899999999
Q ss_pred ccccCC-C---------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe---ccCCeE
Q 022592 197 LSLMGI-N---------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD---FSNKMF 263 (294)
Q Consensus 197 ~~l~~~-~---------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~---~~~~~f 263 (294)
..+++. + ...++.++.+.| |||.+++..... ...+++.++++++||.++... .....+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~ 156 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKVRKILGETV 156 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEEEECSSSEE
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEeeccCCceE
Confidence 888863 2 357889999999 999999987442 245889999999999987743 344455
Q ss_pred EEEEEEE
Q 022592 264 IMFYFKK 270 (294)
Q Consensus 264 ~~i~~~k 270 (294)
+.+.+.|
T Consensus 157 ~~~~~~~ 163 (170)
T 3q87_B 157 YIIKGEK 163 (170)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 5555544
No 71
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.61 E-value=1e-15 Score=129.25 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=94.4
Q ss_pred HHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEE
Q 022592 133 VKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 133 ~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
...+....++ +|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+++++++||+|++
T Consensus 22 ~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 22 VSVANQIPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp HHHHHHSCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred HHHHHhCCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEE
Confidence 3333333466 99999999999998887 3799999997 2678889999999888899999998
Q ss_pred cccccC-CCHHHHHHHHHHhcCcCcEEEEEeecCCCCC---C-----CCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 196 CLSLMG-INFPNYLQEAQRVLKPSGWLLIAEVKSRFDP---N-----TGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 196 ~~~l~~-~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~---~-----~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+....+ .++..++.++.++|+|||.+++..+...... . ...++.+++..+++ ||+++...
T Consensus 101 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEE
T ss_pred EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEE
Confidence 643222 2577999999999999999999876542211 1 12479999999999 99998843
No 72
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=1e-14 Score=128.96 Aligned_cols=126 Identities=16% Similarity=0.149 Sum_probs=97.1
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccCC----------------------CCcEEEcc---
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVSN----------------------DPSVIACD--- 179 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~~----------------------~~~~~~~d--- 179 (294)
.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+. ++.++.+|
T Consensus 34 ~l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 34 AIAEAWQVK-PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHTCC-TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHcCCC-CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 355555443 67799999999999888775 37999999873 56788888
Q ss_pred CCCCCCCCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCC--------------------------C
Q 022592 180 MSNTPLNSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFD--------------------------P 232 (294)
Q Consensus 180 ~~~lp~~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~--------------------------~ 232 (294)
...+|+++++||+|++..+++|. ++..+++.+.++++|||.+++.++..... .
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVAN 192 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCS
T ss_pred hccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccc
Confidence 45667788999999999999995 67777777777777799999987553211 1
Q ss_pred CCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 233 NTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 233 ~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
....++.+++..+++++||+++...
T Consensus 193 ~~~~~s~~~l~~~l~~aGf~~~~~~ 217 (275)
T 3bkx_A 193 IRTLITPDTLAQIAHDNTWTYTAGT 217 (275)
T ss_dssp CCCCCCHHHHHHHHHHHTCEEEECC
T ss_pred ccccCCHHHHHHHHHHCCCeeEEEE
Confidence 1124689999999999999998744
No 73
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.61 E-value=2.5e-16 Score=148.12 Aligned_cols=126 Identities=16% Similarity=0.215 Sum_probs=97.1
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------CCcEE-----EccCCCCCCCCCCccEEEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------DPSVI-----ACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------~~~~~-----~~d~~~lp~~~~~fD~Vi~ 195 (294)
++..+... ++.+|||||||+|.++..++ ..|+|+|+|+. .+... ..+...+|+++++||+|++
T Consensus 99 l~~~~~~~-~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~ 177 (416)
T 4e2x_A 99 FLATELTG-PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYA 177 (416)
T ss_dssp HHHTTTCS-SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHhCCC-CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEE
Confidence 44444332 56799999999999998887 38999999972 22222 2344445677889999999
Q ss_pred cccccCC-CHHHHHHHHHHhcCcCcEEEEEeec-----------CCCCCCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 196 CLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVK-----------SRFDPNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 196 ~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~-----------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
..+|+|. ++..+++++.++|+|||.+++.... ..+......++.+++..+++++||+++....
T Consensus 178 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 178 ANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred CChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 9999996 8999999999999999999997532 1222334457999999999999999988654
No 74
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.60 E-value=1.9e-14 Score=132.72 Aligned_cols=139 Identities=15% Similarity=0.195 Sum_probs=106.8
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCCCC
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPL 185 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~lp~ 185 (294)
.....+++.+... ++.+|||||||+|.++..++ .+++++|+ + .++.++.+|+...|+
T Consensus 177 ~~~~~l~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 177 FAIQLLLEEAKLD-GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHHCCCT-TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred hhHHHHHHhcCCC-CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 3445566665433 56799999999999988886 27899999 5 247899999998877
Q ss_pred CCCCccEEEEcccccCC-C--HHHHHHHHHHhcCcCcEEEEEeecCCCC---------------CCCCC----CCHHHHH
Q 022592 186 NSSSVDVAVFCLSLMGI-N--FPNYLQEAQRVLKPSGWLLIAEVKSRFD---------------PNTGG----ADPNKFS 243 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~-~--~~~~l~el~r~LkpgG~l~i~e~~~~~~---------------~~~~~----~~~~~~~ 243 (294)
++. |+|++..++|+. + ...+++++.++|+|||.+++.++..... ..... ++.+++.
T Consensus 255 ~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 255 PEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp CCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHH
T ss_pred CCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHH
Confidence 654 999999999985 3 6789999999999999999988543210 00111 7889999
Q ss_pred HHHHHCCCeEEEEeccCCeEEEEEEEE
Q 022592 244 KAVCDLGFAPVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 244 ~~l~~~Gf~~~~~~~~~~~f~~i~~~k 270 (294)
++++++||+++...... ...+++++|
T Consensus 333 ~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 333 EILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHHHCCCceEEEEecC-CceEEEEeC
Confidence 99999999998865544 667777765
No 75
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=5.5e-15 Score=133.82 Aligned_cols=114 Identities=15% Similarity=0.234 Sum_probs=93.7
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~ 200 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.++| ++||+|++..+++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 66799999999999988776 3799999997 24788899988775 7899999999999
Q ss_pred CC---CHHHHHHHHHHhcCcCcEEEEEeecCCC--------------------------CCCCCCCCHHHHHHHHHHCCC
Q 022592 201 GI---NFPNYLQEAQRVLKPSGWLLIAEVKSRF--------------------------DPNTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 201 ~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~--------------------------~~~~~~~~~~~~~~~l~~~Gf 251 (294)
|. ++..++.++.++|+|||.+++.++.... .+....++.+++..+++++||
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 246 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGF 246 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCC
Confidence 96 6789999999999999999998765321 111223589999999999999
Q ss_pred eEEEEe
Q 022592 252 APVSKD 257 (294)
Q Consensus 252 ~~~~~~ 257 (294)
+++...
T Consensus 247 ~~~~~~ 252 (318)
T 2fk8_A 247 TVPEPL 252 (318)
T ss_dssp BCCCCE
T ss_pred EEEEEE
Confidence 987643
No 76
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.60 E-value=2.4e-14 Score=132.44 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=104.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCC--CCCCCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNT--PLNSSS 189 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~l--p~~~~~ 189 (294)
++..+... ...+|||||||+|.++..++ .+++++|+.. .++.++.+|+... |++ ++
T Consensus 171 ~l~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~ 248 (363)
T 3dp7_A 171 ALEIVFSH-HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TG 248 (363)
T ss_dssp HHHHHGGG-CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CC
T ss_pred HHHHhccc-CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CC
Confidence 34444333 45699999999999998886 2799999832 2578999999875 566 78
Q ss_pred ccEEEEcccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCC---------------------CCCCCCCHHHHHHH
Q 022592 190 VDVAVFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFD---------------------PNTGGADPNKFSKA 245 (294)
Q Consensus 190 fD~Vi~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~---------------------~~~~~~~~~~~~~~ 245 (294)
||+|++..+||+.+ ...+++++.++|+|||.|+|.+...... .....++.+++..+
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 328 (363)
T 3dp7_A 249 FDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRC 328 (363)
T ss_dssp CSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHH
T ss_pred cCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHH
Confidence 99999999999853 3478999999999999999987532211 11123589999999
Q ss_pred HHHCCCeEEEEec-cCCeEEEEEEEECCc
Q 022592 246 VCDLGFAPVSKDF-SNKMFIMFYFKKKEK 273 (294)
Q Consensus 246 l~~~Gf~~~~~~~-~~~~f~~i~~~k~~~ 273 (294)
|+++||+++.+.. ....+.++.+++...
T Consensus 329 l~~AGf~~v~~~~~~g~~~svi~~~~~~~ 357 (363)
T 3dp7_A 329 IENAGLEVEEIQDNIGLGHSILQCRLKEG 357 (363)
T ss_dssp HHTTTEEESCCCCCBTTTBEEEEEEEC--
T ss_pred HHHcCCeEEEEEeCCCCCceEEEEeeccc
Confidence 9999999988653 334477888877653
No 77
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.59 E-value=3e-14 Score=130.81 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=106.0
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCC-CCCCC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSS 189 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp-~~~~~ 189 (294)
.++..+.....+.+|||||||+|.++..++ ..++++|+.. .++.++.+|+...+ +..+.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 455555443226799999999999998886 2789999943 25789999998876 13456
Q ss_pred ccEEEEcccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCC------------------CCCCCCCCHHHHHHHHHH
Q 022592 190 VDVAVFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRF------------------DPNTGGADPNKFSKAVCD 248 (294)
Q Consensus 190 fD~Vi~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~------------------~~~~~~~~~~~~~~~l~~ 248 (294)
||+|++..++||.+ ...+++++.++|+|||.|++.+..... ......++.+++..++++
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 99999999999864 368999999999999999998753211 112234789999999999
Q ss_pred CCCeEEEEeccCCeEEEEEEEEC
Q 022592 249 LGFAPVSKDFSNKMFIMFYFKKK 271 (294)
Q Consensus 249 ~Gf~~~~~~~~~~~f~~i~~~k~ 271 (294)
+||+++.... ..+.+++++|.
T Consensus 329 aGf~~~~~~~--g~~~l~~a~kp 349 (352)
T 3mcz_A 329 AGLAVGERSI--GRYTLLIGQRS 349 (352)
T ss_dssp TTCEEEEEEE--TTEEEEEEECC
T ss_pred CCCceeeecc--CceEEEEEecC
Confidence 9999998543 45778888775
No 78
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.58 E-value=2.2e-15 Score=135.05 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCCEEEEEcCcccHHHHH----hc---c--c--eEEEeccCC----------------CCcE--EEccCCCCC------C
Q 022592 141 PSLVIADFGCGDARLAKS----VK---N--K--VFSFDLVSN----------------DPSV--IACDMSNTP------L 185 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~----l~---~--~--v~gvD~s~~----------------~~~~--~~~d~~~lp------~ 185 (294)
++.+|||||||+|.++.. ++ . . ++|+|+|+. ++.+ ..+++.+++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 456899999999975432 22 1 2 399999962 2222 334444333 5
Q ss_pred CCCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC-------------CC--CCCCCCCHHHHHHHHHHC
Q 022592 186 NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR-------------FD--PNTGGADPNKFSKAVCDL 249 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~-------------~~--~~~~~~~~~~~~~~l~~~ 249 (294)
++++||+|+++.+|||. |+..+++++.++|||||.++++..... .. .....++.+++..+|+++
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 67899999999999996 899999999999999999999864321 00 122347899999999999
Q ss_pred CCeEEEEec
Q 022592 250 GFAPVSKDF 258 (294)
Q Consensus 250 Gf~~~~~~~ 258 (294)
||.++....
T Consensus 212 Gf~~~~~~~ 220 (292)
T 2aot_A 212 GLKYECYDL 220 (292)
T ss_dssp TCCEEEEEE
T ss_pred CCceEEEEe
Confidence 998876433
No 79
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.58 E-value=1e-14 Score=135.34 Aligned_cols=138 Identities=17% Similarity=0.220 Sum_probs=102.5
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhcc-----ceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
..++..+....+..+|||||||+|.++..++. .++++|+.. .++.++.+|+.. +++. ||+|++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~ 274 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILK 274 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEe
Confidence 34455543223557999999999999988862 578889832 467899999987 6654 9999999
Q ss_pred ccccCC-CHH--HHHHHHHHhcCcCcEEEEEeecCCCCC--------------------CCCCCCHHHHHHHHHHCCCeE
Q 022592 197 LSLMGI-NFP--NYLQEAQRVLKPSGWLLIAEVKSRFDP--------------------NTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 197 ~~l~~~-~~~--~~l~el~r~LkpgG~l~i~e~~~~~~~--------------------~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
.+|||. +.. .+++++.++|+|||.|+|.++...... ....++.+++..+++++||++
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCce
Confidence 999985 444 899999999999999999875421111 112358899999999999999
Q ss_pred EEEec-cCCeEEEEEEEE
Q 022592 254 VSKDF-SNKMFIMFYFKK 270 (294)
Q Consensus 254 ~~~~~-~~~~f~~i~~~k 270 (294)
+.... ....+.++++++
T Consensus 355 ~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 355 FQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEEEEEETTTEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEeC
Confidence 88654 333247777754
No 80
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.58 E-value=2.1e-14 Score=132.84 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=104.9
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~ 188 (294)
..+++.+... ++.+|||||||+|.++..++ ..++++|+ + .++.++.+|+.+ +++.
T Consensus 172 ~~~~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 247 (374)
T 1qzz_A 172 EAPADAYDWS-AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV- 247 (374)
T ss_dssp HHHHHTSCCT-TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-
T ss_pred HHHHHhCCCC-CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-
Confidence 4455554332 56799999999999988876 27899998 5 268899999876 4444
Q ss_pred CccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEee--cCCCC----------------CCCCCCCHHHHHHHHH
Q 022592 189 SVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEV--KSRFD----------------PNTGGADPNKFSKAVC 247 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~--~~~~~----------------~~~~~~~~~~~~~~l~ 247 (294)
.||+|++..++||.+. ..+++++.++|+|||.+++.++ ..... .....++.+++..+++
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 327 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAG 327 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHH
Confidence 3999999999998643 3899999999999999999887 31100 0122368999999999
Q ss_pred HCCCeEEEEeccCCeE-----EEEEEEECC
Q 022592 248 DLGFAPVSKDFSNKMF-----IMFYFKKKE 272 (294)
Q Consensus 248 ~~Gf~~~~~~~~~~~f-----~~i~~~k~~ 272 (294)
++||+++........+ .++++++..
T Consensus 328 ~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 328 SAGLALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp TTTEEEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred HCCCceEEEEECCCCcccCCcEEEEEEECc
Confidence 9999998866555555 888888865
No 81
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.57 E-value=6.1e-14 Score=129.14 Aligned_cols=141 Identities=13% Similarity=0.170 Sum_probs=105.0
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~ 188 (294)
...+++.+... ++.+|||||||+|.++..++ ..++++|+.. .++.++.+|+.+ +++.
T Consensus 172 ~~~l~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 172 FDAPAAAYDWT-NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp THHHHHHSCCT-TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-
T ss_pred HHHHHHhCCCc-cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-
Confidence 34556655433 56799999999999988876 2688999722 268899999875 4444
Q ss_pred CccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeec--CCCC---------------CCCCCCCHHHHHHHHHH
Q 022592 189 SVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVK--SRFD---------------PNTGGADPNKFSKAVCD 248 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~--~~~~---------------~~~~~~~~~~~~~~l~~ 248 (294)
.||+|++..++|+.+. ..+++++.++|+|||.+++.+.. .... .....++.+++..+|++
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAAS 328 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHH
Confidence 3999999999998633 48999999999999999999865 1110 01223688999999999
Q ss_pred CCCeEEEEeccCCe-----EEEEEEEECC
Q 022592 249 LGFAPVSKDFSNKM-----FIMFYFKKKE 272 (294)
Q Consensus 249 ~Gf~~~~~~~~~~~-----f~~i~~~k~~ 272 (294)
+||+++........ +.+++++|..
T Consensus 329 aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (360)
T 1tw3_A 329 AGLVVEEVRQLPSPTIPYDLSLLVLAPAA 357 (360)
T ss_dssp TTEEEEEEEEEECSSSSCEEEEEEEEEC-
T ss_pred CCCeEEEEEeCCCCcccCccEEEEEEeCC
Confidence 99999886544433 7888888753
No 82
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.57 E-value=2.3e-14 Score=121.41 Aligned_cols=131 Identities=21% Similarity=0.274 Sum_probs=96.9
Q ss_pred HHHHhhcc-CCCCEEEEEcCcccHHHHHhc----cceEEEeccC-------------CCCcEEEccCCCCCCCCCCccEE
Q 022592 132 IVKWLKDH-SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVA 193 (294)
Q Consensus 132 ~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD~V 193 (294)
+...+... .++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..+++++++||+|
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v 111 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVV 111 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEE
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEE
Confidence 44444432 466799999999999988876 2799999997 36889999999999888999999
Q ss_pred EEcccccCC----------------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCC--eEEE
Q 022592 194 VFCLSLMGI----------------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGF--APVS 255 (294)
Q Consensus 194 i~~~~l~~~----------------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf--~~~~ 255 (294)
++..++++. +...++.++.++|+|||.+++.++.. ......++...|| .+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~----------~~~~~~~~~~~~~~~~~~~ 181 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA----------PHFRTRHYAQAYYGWSLRH 181 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC----------HHHHHHHHCCGGGCEEEEE
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC----------cHHHHHHHhccccCcEEEE
Confidence 998887642 34789999999999999999987442 2334455656665 4333
Q ss_pred Eec-cCCeEEEEEEEECC
Q 022592 256 KDF-SNKMFIMFYFKKKE 272 (294)
Q Consensus 256 ~~~-~~~~f~~i~~~k~~ 272 (294)
... ...+++++.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~ 199 (215)
T 2pxx_A 182 ATYGSGFHFHLYLMHKGG 199 (215)
T ss_dssp EEESGGGCEEEEEEEETC
T ss_pred EEecCcceEEEEEEEeCC
Confidence 222 33456677777765
No 83
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=3.2e-14 Score=123.71 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=95.7
Q ss_pred HHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC------------CCCcEEEccCCCCCCCC-----CCccEE
Q 022592 134 KWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNS-----SSVDVA 193 (294)
Q Consensus 134 ~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------~~~~~~~~d~~~lp~~~-----~~fD~V 193 (294)
..+....++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+.++++.. ..||+|
T Consensus 49 ~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 49 RFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp HHTTTSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred HHhhccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEE
Confidence 333333466799999999999998887 3899999997 36789999998866432 248999
Q ss_pred EEcccccCC---CHHHHHHHHHHhcCcCcEEEEEeecCCC------------------------CCCCCCCCHHHHHHHH
Q 022592 194 VFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEVKSRF------------------------DPNTGGADPNKFSKAV 246 (294)
Q Consensus 194 i~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~~~~~------------------------~~~~~~~~~~~~~~~l 246 (294)
++..+++|. +...+++++.++|+|||.+++.++.... ......++.+++..++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 999999995 5679999999999999999998765321 0111236889999999
Q ss_pred HHCCCeEEEEec
Q 022592 247 CDLGFAPVSKDF 258 (294)
Q Consensus 247 ~~~Gf~~~~~~~ 258 (294)
+||+++....
T Consensus 209 --aGf~~~~~~~ 218 (245)
T 3ggd_A 209 --PDFEILSQGE 218 (245)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCCEEEeccc
Confidence 9999987544
No 84
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.57 E-value=6.9e-14 Score=129.01 Aligned_cols=130 Identities=19% Similarity=0.273 Sum_probs=104.0
Q ss_pred CCCEEEEEcCcccHHHHHhcc-----ceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVKN-----KVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
...+|||||||+|.++..++. +++.+|+.. +++.++.+|+...|++ .+|+|++..+||+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHD 256 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeeccc
Confidence 456899999999999998872 677888643 5789999999876654 4799999999997
Q ss_pred C-CH--HHHHHHHHHhcCcCcEEEEEeecCCCCC-----------------CCCCCCHHHHHHHHHHCCCeEEEEeccCC
Q 022592 202 I-NF--PNYLQEAQRVLKPSGWLLIAEVKSRFDP-----------------NTGGADPNKFSKAVCDLGFAPVSKDFSNK 261 (294)
Q Consensus 202 ~-~~--~~~l~el~r~LkpgG~l~i~e~~~~~~~-----------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 261 (294)
. |. ..+|++++++|+|||.++|.|..-.-.. ....++.+++..+|+++||+++.+.....
T Consensus 257 ~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~ 336 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGA 336 (353)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSS
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 5 33 4789999999999999999985321111 11125899999999999999999887788
Q ss_pred eEEEEEEEECC
Q 022592 262 MFIMFYFKKKE 272 (294)
Q Consensus 262 ~f~~i~~~k~~ 272 (294)
.+.+|+++|.-
T Consensus 337 ~~~~i~ArKgt 347 (353)
T 4a6d_A 337 IYDAILARKGT 347 (353)
T ss_dssp SCEEEEEECCC
T ss_pred ceEEEEEEecC
Confidence 88999999864
No 85
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.57 E-value=1.8e-14 Score=122.89 Aligned_cols=139 Identities=12% Similarity=0.202 Sum_probs=99.4
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhcc---ceEEEeccC-------------CCCcEEEccCCCCCCCCCCccEEEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVKN---KVFSFDLVS-------------NDPSVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~---~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
++..+....++.+|||||||+|.++..++. .|+|+|+|+ .++.++.+|+..++ ++++||+|++
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~ 120 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVV 120 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEE
Confidence 333333333567999999999999998873 799999987 35789999999988 6789999999
Q ss_pred cccccCC-CH---HHHHHHHHHhcCcCcEEEEEeecCCCC-CCCCCCCHHHHHHHHHHCCCeEEE---E--eccCCeEEE
Q 022592 196 CLSLMGI-NF---PNYLQEAQRVLKPSGWLLIAEVKSRFD-PNTGGADPNKFSKAVCDLGFAPVS---K--DFSNKMFIM 265 (294)
Q Consensus 196 ~~~l~~~-~~---~~~l~el~r~LkpgG~l~i~e~~~~~~-~~~~~~~~~~~~~~l~~~Gf~~~~---~--~~~~~~f~~ 265 (294)
..+++|. ++ ..++.++.++|+|||.+++........ ........+.+..++.. ++..++ . ......|.+
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~d~~l 199 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTE-ALTEVERVQCQGQSADEDCLL 199 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHH-HSEEEEEEEEECSSTTCEEEE
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHh-hccceEEEeccCCccccchhH
Confidence 9999996 55 477999999999999999976443211 01112455666666654 344322 1 224566777
Q ss_pred EEEEECC
Q 022592 266 FYFKKKE 272 (294)
Q Consensus 266 i~~~k~~ 272 (294)
..+++..
T Consensus 200 ~~~~~~~ 206 (216)
T 3ofk_A 200 ARFRNPE 206 (216)
T ss_dssp EEEECCC
T ss_pred HHHhCCc
Confidence 7777754
No 86
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.56 E-value=2.9e-15 Score=129.29 Aligned_cols=105 Identities=13% Similarity=0.246 Sum_probs=87.5
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------CCCcEEEccC-CCCCCC-CCCccEEEEcccccCCCH
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------NDPSVIACDM-SNTPLN-SSSVDVAVFCLSLMGINF 204 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------~~~~~~~~d~-~~lp~~-~~~fD~Vi~~~~l~~~~~ 204 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+ ..+|++ +++||+|+++ .++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-----~~~ 121 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-----RGP 121 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----SCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----CCH
Confidence 366799999999999999887 3899999997 4789999999 578888 8899999987 467
Q ss_pred HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 205 PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
..++.++.++|+|||.|+.. .. ..+...+...+.++||.+.....
T Consensus 122 ~~~l~~~~~~LkpgG~l~~~--~~-------~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 122 TSVILRLPELAAPDAHFLYV--GP-------RLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp SGGGGGHHHHEEEEEEEEEE--ES-------SSCCTHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEe--CC-------cCCHHHHHHHHHHCCCeEEEEEe
Confidence 78999999999999999921 11 12457899999999999887554
No 87
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=3.1e-14 Score=126.82 Aligned_cols=123 Identities=20% Similarity=0.232 Sum_probs=95.4
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------------CCcEEEccCCCCCCCCCCccEE
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTPLNSSSVDVA 193 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~lp~~~~~fD~V 193 (294)
.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+. ++.++.+|+..+++ +++||+|
T Consensus 111 ~~~~~~~~~-~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i 188 (286)
T 3m70_A 111 DVVDAAKII-SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFI 188 (286)
T ss_dssp HHHHHHHHS-CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEE
T ss_pred HHHHHhhcc-CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEE
Confidence 345555544 66799999999999998887 38999999971 67899999998887 7889999
Q ss_pred EEcccccCCC---HHHHHHHHHHhcCcCcEEEEEeecCCCCC-----CCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 194 VFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEVKSRFDP-----NTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 194 i~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~~~~~~~-----~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+++.+++|.+ ...++.++.++|+|||.++++........ ....++.+++..++.. |+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 9999999863 45899999999999999887654322111 1223577888888864 8887754
No 88
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.56 E-value=6.4e-14 Score=128.92 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=97.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-CHH-
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFP- 205 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~- 205 (294)
+..+|||||||+|.++..++ .+++++|+.. .++.++.+|+.. +++. ||+|++..+|||. +..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~ 264 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDC 264 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHH
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCHHHH
Confidence 45799999999999998886 2699999822 357889999976 5553 9999999999985 444
Q ss_pred -HHHHHHHHhcCc---CcEEEEEeecCCCCC-------------------CCCCCCHHHHHHHHHHCCCeEEEEeccCCe
Q 022592 206 -NYLQEAQRVLKP---SGWLLIAEVKSRFDP-------------------NTGGADPNKFSKAVCDLGFAPVSKDFSNKM 262 (294)
Q Consensus 206 -~~l~el~r~Lkp---gG~l~i~e~~~~~~~-------------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 262 (294)
.+++++.++|+| ||+++|.++...... ....++.+++.++++++||+++........
T Consensus 265 ~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~ 344 (352)
T 1fp2_A 265 LRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPLTGF 344 (352)
T ss_dssp HHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEecCCC
Confidence 899999999999 999999875422111 012257899999999999999886555555
Q ss_pred EEEEEEE
Q 022592 263 FIMFYFK 269 (294)
Q Consensus 263 f~~i~~~ 269 (294)
..+++++
T Consensus 345 ~~vie~~ 351 (352)
T 1fp2_A 345 LSLIEIY 351 (352)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 6677665
No 89
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.6e-14 Score=129.76 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=76.6
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC-----------------CCCcEEEccCCCCCCCC------CCcc
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------------NDPSVIACDMSNTPLNS------SSVD 191 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-----------------~~~~~~~~d~~~lp~~~------~~fD 191 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+.++++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 56799999999999988776 2799999986 26789999999988877 8999
Q ss_pred EEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 192 VAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 192 ~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++..+++|.++..++.++.++|+|||.|++.+
T Consensus 116 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 116 MITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999999999999999999999999999954
No 90
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=3.9e-14 Score=119.96 Aligned_cols=119 Identities=16% Similarity=0.193 Sum_probs=96.0
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+.+.+ +++||+|+++..+++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILAEI 137 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcHHH
Confidence 56799999999999988876 3799999997 23889999987643 578999999877765
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEEC
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKK 271 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~ 271 (294)
...+++++.++|+|||.+++.++... +.+.+..+++++||+++.......++.++..++.
T Consensus 138 --~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~~ 197 (205)
T 3grz_A 138 --LLDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQALAENSFQIDLKMRAGRWIGLAISRKH 197 (205)
T ss_dssp --HHHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTEEEEEEEEETTEEEEEEEECC
T ss_pred --HHHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHHHHHcCCceEEeeccCCEEEEEEeccc
Confidence 47889999999999999999865533 4588999999999999987776665555555443
No 91
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=1.4e-13 Score=120.10 Aligned_cols=83 Identities=17% Similarity=0.321 Sum_probs=69.0
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEccc-ccCC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLS-LMGI 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~-l~~~ 202 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++++ ++||+|++..+ +++.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF 119 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC
Confidence 55799999999999998887 3899999997 2578999999988865 67999998744 4443
Q ss_pred ---CHHHHHHHHHHhcCcCcEEEEE
Q 022592 203 ---NFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 203 ---~~~~~l~el~r~LkpgG~l~i~ 224 (294)
+...+++++.++|+|||.+++.
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4678999999999999999874
No 92
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.52 E-value=7.2e-14 Score=120.89 Aligned_cols=125 Identities=18% Similarity=0.114 Sum_probs=90.4
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------CCCcEEEccCCC----CCCCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSN----TPLNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------~~~~~~~~d~~~----lp~~~~~fD~Vi~~~~ 198 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.. .++. ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~-- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED-- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe--
Confidence 56799999999999888775 4799999997 367788999987 7766 789999821
Q ss_pred ccCCCH---HHHHHHHHHhcCcCcEEEEEeecCCCCCCCC---CCCHHHHHHHHHHCCCeEEEEeccCC---eEEEEEEE
Q 022592 199 LMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTG---GADPNKFSKAVCDLGFAPVSKDFSNK---MFIMFYFK 269 (294)
Q Consensus 199 l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~---~~~~~~~~~~l~~~Gf~~~~~~~~~~---~f~~i~~~ 269 (294)
..++ ..++.++.++|+|||.++++ +.....+... .+...++. +|+++||+++....... .+++++++
T Consensus 151 --~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 151 --VAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp --CCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred --cCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 1344 67799999999999999997 4322211111 11235666 88999999887544333 36777777
Q ss_pred ECC
Q 022592 270 KKE 272 (294)
Q Consensus 270 k~~ 272 (294)
|.+
T Consensus 227 k~~ 229 (230)
T 1fbn_A 227 WEG 229 (230)
T ss_dssp ECC
T ss_pred eCC
Confidence 753
No 93
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=5.3e-14 Score=117.04 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=97.9
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CC--CcEEEccCCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------ND--PSVIACDMSNTPLNSSS 189 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~--~~~~~~d~~~lp~~~~~ 189 (294)
..+++.+... ++.+|||+|||+|.++..++ ..++|+|+++ .+ +.++.+|+.. ++++++
T Consensus 42 ~~l~~~~~~~-~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 119 (194)
T 1dus_A 42 KILVENVVVD-KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRK 119 (194)
T ss_dssp HHHHHHCCCC-TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSC
T ss_pred HHHHHHcccC-CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCC
Confidence 4466666544 66799999999999998887 4899999987 23 7889999877 345678
Q ss_pred ccEEEEcccccCC--CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEE
Q 022592 190 VDVAVFCLSLMGI--NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFY 267 (294)
Q Consensus 190 fD~Vi~~~~l~~~--~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~ 267 (294)
||+|++...+++. +...++.++.++|+|||.+++....... ..++...+++. |..++.......|+++.
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~--------~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 190 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG--------AKSLAKYMKDV-FGNVETVTIKGGYRVLK 190 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH--------HHHHHHHHHHH-HSCCEEEEEETTEEEEE
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC--------hHHHHHHHHHH-hcceEEEecCCcEEEEE
Confidence 9999999988873 5679999999999999999998765422 24577777776 54444334445567777
Q ss_pred EEE
Q 022592 268 FKK 270 (294)
Q Consensus 268 ~~k 270 (294)
++|
T Consensus 191 ~~k 193 (194)
T 1dus_A 191 SKK 193 (194)
T ss_dssp EEC
T ss_pred Eee
Confidence 665
No 94
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.52 E-value=8.3e-15 Score=131.56 Aligned_cols=117 Identities=17% Similarity=0.258 Sum_probs=89.7
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------------------------------------
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------------------------------- 170 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------------------------------------- 170 (294)
++.+|||||||+|.++..++ ..|+|+|+++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 56799999999999988876 3799999986
Q ss_pred ----------------------------CCCcEEEccCCCCC-----CCCCCccEEEEcccccCC-------CHHHHHHH
Q 022592 171 ----------------------------NDPSVIACDMSNTP-----LNSSSVDVAVFCLSLMGI-------NFPNYLQE 210 (294)
Q Consensus 171 ----------------------------~~~~~~~~d~~~lp-----~~~~~fD~Vi~~~~l~~~-------~~~~~l~e 210 (294)
.++.++.+|+...+ +.+++||+|++..+++|. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 15778888887644 567899999999999764 67789999
Q ss_pred HHHhcCcCcEEEEEeecCCCC-C--C----------CCCCCHHHHHHHHHH--CCCeEEEEe
Q 022592 211 AQRVLKPSGWLLIAEVKSRFD-P--N----------TGGADPNKFSKAVCD--LGFAPVSKD 257 (294)
Q Consensus 211 l~r~LkpgG~l~i~e~~~~~~-~--~----------~~~~~~~~~~~~l~~--~Gf~~~~~~ 257 (294)
++++|+|||.|++........ . . ...+.++++..+|.+ +||+.++..
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999963211000 0 0 011457889999998 999877643
No 95
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.52 E-value=2.9e-13 Score=124.82 Aligned_cols=127 Identities=15% Similarity=0.217 Sum_probs=99.5
Q ss_pred CCCEEEEEcCcccHHHHHhcc-----ceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-CHH-
Q 022592 141 PSLVIADFGCGDARLAKSVKN-----KVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI-NFP- 205 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~~- 205 (294)
+..+|||||||+|.++..++. .++++|++. .++.++.+|+.. +++ .||+|++..+||+. +..
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~ 269 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQS 269 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHH
Confidence 456999999999999988862 688999853 357889999987 665 49999999999985 544
Q ss_pred -HHHHHHHHhcCc---CcEEEEEeecCCCCCC--------------------CCCCCHHHHHHHHHHCCCeEEEEeccCC
Q 022592 206 -NYLQEAQRVLKP---SGWLLIAEVKSRFDPN--------------------TGGADPNKFSKAVCDLGFAPVSKDFSNK 261 (294)
Q Consensus 206 -~~l~el~r~Lkp---gG~l~i~e~~~~~~~~--------------------~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 261 (294)
.+++++.++|+| ||.++|.++....... ...++.+++.++++++||+++.......
T Consensus 270 ~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~ 349 (358)
T 1zg3_A 270 LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISG 349 (358)
T ss_dssp HHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCC
Confidence 999999999999 9999998754221111 1225889999999999999988665556
Q ss_pred eEEEEEEEE
Q 022592 262 MFIMFYFKK 270 (294)
Q Consensus 262 ~f~~i~~~k 270 (294)
...++++++
T Consensus 350 ~~~vie~~~ 358 (358)
T 1zg3_A 350 FKSLIEVYP 358 (358)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEeC
Confidence 667777653
No 96
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=2.3e-14 Score=119.39 Aligned_cols=120 Identities=14% Similarity=0.130 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-CCCCCccEEEEcc-cc
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSSVDVAVFCL-SL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-~~~~~fD~Vi~~~-~l 199 (294)
.++.+|||+|||+|.++..++ .+|+|+|+|+ .++.++..++..++ +.+++||+|+++. .+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 367799999999999999887 4899999997 35778887777643 4467899999874 33
Q ss_pred cC---------CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc
Q 022592 200 MG---------INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS 259 (294)
Q Consensus 200 ~~---------~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 259 (294)
++ .+...++.++.++|+|||.++++.+...............+...+...+|.+....+.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPL 169 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEES
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhh
Confidence 22 1235788999999999999999865432111000011223333444566888775554
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=9.2e-14 Score=119.02 Aligned_cols=124 Identities=14% Similarity=0.128 Sum_probs=86.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------CCCcEEEccCCCC----CCCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNT----PLNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------~~~~~~~~d~~~l----p~~~~~fD~Vi~~~~ 198 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+... ++. ++||+|++..
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~- 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDI- 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEec-
Confidence 67799999999999887765 4799999997 3567778888763 444 7899999873
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHH----HHHHHCCCeEEEEecc---CCeEEEEEEEE
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFS----KAVCDLGFAPVSKDFS---NKMFIMFYFKK 270 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~----~~l~~~Gf~~~~~~~~---~~~f~~i~~~k 270 (294)
..+.....++.++.++|||||.|+++...... ....+.+++. +.++++ |++++.... ...+++++++|
T Consensus 135 ~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~---~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 135 AQKNQIEILKANAEFFLKEKGEVVIMVKARSI---DSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHH---CTTSCHHHHHHHHHHHHHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred cChhHHHHHHHHHHHHhCCCCEEEEEEecCCc---cccCCHHHHHHHHHHHHHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 22223445689999999999999998322111 1123445542 337888 999885433 33456777665
No 98
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=3.3e-15 Score=130.22 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=82.1
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC--------------CCCcEEEccCCC--CCCCCCCccEEEEc----
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSN--TPLNSSSVDVAVFC---- 196 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~--------------~~~~~~~~d~~~--lp~~~~~fD~Vi~~---- 196 (294)
++.+|||||||+|..+..++ ..++|+|+|+ .++.++.+|+.. .++++++||.|++.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 67799999999999998886 3789999998 245567777654 35778899999853
Q ss_pred -ccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC---CCCCCC---CCCHHHHHHHHHHCCCeEEEE
Q 022592 197 -LSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR---FDPNTG---GADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 197 -~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~---~~~~~~---~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
.+++|. ++..+++++.|+|||||+|++.+.... ...... ......+...|.++||+++.+
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEEE
Confidence 333443 788999999999999999988642211 000000 012345567788899986543
No 99
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=4.8e-13 Score=115.14 Aligned_cols=127 Identities=17% Similarity=0.139 Sum_probs=95.2
Q ss_pred CCCCEEEEEcCc-ccHHHHHhc----cceEEEeccC--------------CCCcEEEccCCC-CCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCG-DARLAKSVK----NKVFSFDLVS--------------NDPSVIACDMSN-TPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG-~G~~~~~l~----~~v~gvD~s~--------------~~~~~~~~d~~~-lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||+||| +|.++..++ ..|+|+|+++ .++.++.+|+.. .++++++||+|+++..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 367799999999 999988776 4799999997 157899999753 34556899999998776
Q ss_pred cCCC--------------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec-
Q 022592 200 MGIN--------------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF- 258 (294)
Q Consensus 200 ~~~~--------------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~- 258 (294)
++.. ...++.++.++|+|||.+++...... .....+.+++++.||.+....+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~~~ 206 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------KLLNVIKERGIKLGYSVKDIKFK 206 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------hHHHHHHHHHHHcCCceEEEEec
Confidence 5531 37899999999999999999643221 1347888999999998877544
Q ss_pred -cCCeEEEEEEEECCc
Q 022592 259 -SNKMFIMFYFKKKEK 273 (294)
Q Consensus 259 -~~~~f~~i~~~k~~~ 273 (294)
......++.|.|...
T Consensus 207 ~g~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 207 VGTRWRHSLIFFKGIS 222 (230)
T ss_dssp CCC-CEEEEEEECCC-
T ss_pred CCCeEEEEEEEecccc
Confidence 455577777877543
No 100
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=1.8e-13 Score=119.17 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=93.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCC---CCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLN---SSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~---~~~fD~Vi~~~ 197 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.+++++ +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 56799999999999887776 3799999997 3578999999887754 57899999876
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe---c--cCCeEEEEEEEECC
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD---F--SNKMFIMFYFKKKE 272 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~---~--~~~~f~~i~~~k~~ 272 (294)
+ .++..++.++.++|+|||.+++..-.. . .....++...++..||.+.... . ......++.++|..
T Consensus 150 ~---~~~~~~l~~~~~~LkpgG~l~~~~g~~-~-----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 150 V---ARLSVLSELCLPLVKKNGLFVALKAAS-A-----EEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIK 220 (240)
T ss_dssp C---SCHHHHHHHHGGGEEEEEEEEEEECC--C-----HHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred c---CCHHHHHHHHHHhcCCCCEEEEEeCCC-c-----hHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecC
Confidence 3 578899999999999999999863111 0 0123457778999999887643 1 23567777887765
Q ss_pred c
Q 022592 273 K 273 (294)
Q Consensus 273 ~ 273 (294)
.
T Consensus 221 ~ 221 (240)
T 1xdz_A 221 N 221 (240)
T ss_dssp C
T ss_pred C
Confidence 3
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=4.8e-15 Score=128.69 Aligned_cols=113 Identities=18% Similarity=0.172 Sum_probs=83.9
Q ss_pred CCCEEEEEcCcccHHHHHhcc----ceEEEeccC--------------CCCcEEEccCCCC--CCCCCCccEEEE-cccc
Q 022592 141 PSLVIADFGCGDARLAKSVKN----KVFSFDLVS--------------NDPSVIACDMSNT--PLNSSSVDVAVF-CLSL 199 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~----~v~gvD~s~--------------~~~~~~~~d~~~l--p~~~~~fD~Vi~-~~~l 199 (294)
++.+|||||||+|.++..++. .|+|+|+|+ .++.++.+|+.++ ++++++||+|++ .+++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 567999999999999988863 799999997 2467889999887 888899999999 5554
Q ss_pred cC--C---CHHHHHHHHHHhcCcCcEEEEEeecCCC---CCCCCC---CCHHHHHHHHHHCCCeE
Q 022592 200 MG--I---NFPNYLQEAQRVLKPSGWLLIAEVKSRF---DPNTGG---ADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 200 ~~--~---~~~~~l~el~r~LkpgG~l~i~e~~~~~---~~~~~~---~~~~~~~~~l~~~Gf~~ 253 (294)
.. . ++..++.++.++|||||.|++.++.... ...... ...+.....|.++||.+
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 21 2 3457899999999999999987644221 110010 11245567789999975
No 102
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.49 E-value=5.8e-14 Score=120.03 Aligned_cols=125 Identities=16% Similarity=0.191 Sum_probs=89.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC-------------------CCcEEEccCCCCCCCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN-------------------DPSVIACDMSNTPLNS 187 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~-------------------~~~~~~~d~~~lp~~~ 187 (294)
.+..+... ++.+|||||||+|.++..++ ..|+|+|+|+. ++.++++|+.++|+++
T Consensus 19 ~~~~l~~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 19 EFEQLRSQ-YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHHHTT-SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC
T ss_pred HHHHhhcc-CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC
Confidence 34444433 66799999999999998886 37999999983 5678999999999887
Q ss_pred CCccEEEEccc---cc--C-CCHHHHHHHHHHhcCcCcEEEEEeecCCCCC------CCCCCC----HHHHHHHHHHCCC
Q 022592 188 SSVDVAVFCLS---LM--G-INFPNYLQEAQRVLKPSGWLLIAEVKSRFDP------NTGGAD----PNKFSKAVCDLGF 251 (294)
Q Consensus 188 ~~fD~Vi~~~~---l~--~-~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~------~~~~~~----~~~~~~~l~~~Gf 251 (294)
++ |.|+.... ++ | .++..+++++.++|||||.+++..-...+.+ ..+.++ .+.+..++.++||
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGW 176 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTE
T ss_pred CC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCC
Confidence 76 77763332 21 3 4668999999999999999999632221111 111222 3447779999999
Q ss_pred eEEEEec
Q 022592 252 APVSKDF 258 (294)
Q Consensus 252 ~~~~~~~ 258 (294)
++.....
T Consensus 177 ~i~~~~~ 183 (218)
T 3mq2_A 177 KLADCRY 183 (218)
T ss_dssp EEEEEEE
T ss_pred Cceeeec
Confidence 9988654
No 103
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.49 E-value=3.3e-13 Score=114.20 Aligned_cols=112 Identities=16% Similarity=0.214 Sum_probs=89.0
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCc
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~f 190 (294)
.++..+... ++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+.......++|
T Consensus 31 ~~l~~l~~~-~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 31 VTLSKLRLQ-DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHHTTCC-TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHHHHcCCC-CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 345555444 67799999999999988776 3799999997 36788899986654444779
Q ss_pred cEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 191 DVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 191 D~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
|+|++..+++ +...++.++.++|+|||.+++...... +.+.+..+++++||.+
T Consensus 110 D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 110 DRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLNAVTLD--------TLTKAVEFLEDHGYMV 162 (204)
T ss_dssp SEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEEECBHH--------HHHHHHHHHHHTTCEE
T ss_pred CEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEEecccc--------cHHHHHHHHHHCCCce
Confidence 9999988775 888999999999999999999754321 3477889999999943
No 104
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.48 E-value=2.4e-13 Score=119.70 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=98.3
Q ss_pred HHHHhhccC-CCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCC--CCCC
Q 022592 132 IVKWLKDHS-PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTP--LNSS 188 (294)
Q Consensus 132 ~~~~l~~~~-~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp--~~~~ 188 (294)
++..+.... ++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+++ ++.+
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTT
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccC
Confidence 333343444 56799999999999998886 2799999987 25789999998865 5578
Q ss_pred CccEEEEcccccCC---------------------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 022592 189 SVDVAVFCLSLMGI---------------------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVC 247 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~---------------------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~ 247 (294)
+||+|+++..+... +...++..+.++|+|||.++++.. .....++...+.
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---------~~~~~~~~~~l~ 189 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---------PERLLDIIDIMR 189 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---------TTTHHHHHHHHH
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---------HHHHHHHHHHHH
Confidence 99999997655321 235799999999999999999531 125588999999
Q ss_pred HCCCeEEEEec------cCCeEEEEEEEECC
Q 022592 248 DLGFAPVSKDF------SNKMFIMFYFKKKE 272 (294)
Q Consensus 248 ~~Gf~~~~~~~------~~~~f~~i~~~k~~ 272 (294)
+.||....... ....+.++.++|..
T Consensus 190 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~~ 220 (259)
T 3lpm_A 190 KYRLEPKRIQFVHPRSDREANTVLVEGIKDG 220 (259)
T ss_dssp HTTEEEEEEEEEESSTTSCCSEEEEEEEETC
T ss_pred HCCCceEEEEEeecCCCCCcEEEEEEEEeCC
Confidence 99998877432 33457778887764
No 105
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.48 E-value=4e-13 Score=113.17 Aligned_cols=107 Identities=14% Similarity=0.206 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc-------cceEEEeccCC----CCcEEEccCCCCC------------------------
Q 022592 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVSN----DPSVIACDMSNTP------------------------ 184 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~----~~~~~~~d~~~lp------------------------ 184 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+. ++.++.+|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 100 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKE 100 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHh
Confidence 366799999999999888775 36999999983 6889999998876
Q ss_pred -CCCCCccEEEEcccccCC-----CH-------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCC
Q 022592 185 -LNSSSVDVAVFCLSLMGI-----NF-------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 185 -~~~~~fD~Vi~~~~l~~~-----~~-------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf 251 (294)
+++++||+|++..++++. +. ..++.++.++|+|||.|++..+.. .+...+...+.. .|
T Consensus 101 ~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--------~~~~~l~~~l~~-~f 171 (201)
T 2plw_A 101 ILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG--------SQTNNLKTYLKG-MF 171 (201)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS--------TTHHHHHHHHHT-TE
T ss_pred hcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC--------CCHHHHHHHHHH-HH
Confidence 566789999998887763 22 137889999999999999865432 134667777765 47
Q ss_pred eEEE
Q 022592 252 APVS 255 (294)
Q Consensus 252 ~~~~ 255 (294)
..+.
T Consensus 172 ~~v~ 175 (201)
T 2plw_A 172 QLVH 175 (201)
T ss_dssp EEEE
T ss_pred heEE
Confidence 6555
No 106
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=8.8e-14 Score=123.05 Aligned_cols=122 Identities=10% Similarity=0.015 Sum_probs=84.9
Q ss_pred HhcChhhHHHHHHhHHhhhccCC-CcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC-------
Q 022592 103 FNENPALFDMYHSGYQEQMSHWP-ELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN------- 171 (294)
Q Consensus 103 ~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~------- 171 (294)
++..++.|+.....|......-. ......++..+... ++.+|||||||+|.++..++ ..|+|+|+|+.
T Consensus 7 ~~s~a~~wd~~a~~f~~~~~~~~~~~~~~~il~~l~l~-~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~ 85 (261)
T 3iv6_A 7 TNSKAEAWELIGNQFWTIGRVAARPSDRENDIFLENIV-PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAE 85 (261)
T ss_dssp TCTTHHHHHTTTTHHHHTSCGGGSCCHHHHHHHTTTCC-TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhhccccHHHHHHHHHhcCCC-CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence 44455666665555544322111 23445566666544 67799999999999998887 48999999982
Q ss_pred --CCcEEEccCCCCCC-----CCCCccEEEEcccccCC---CHHHHHHHHHHhcCcCcEEEEEee
Q 022592 172 --DPSVIACDMSNTPL-----NSSSVDVAVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 172 --~~~~~~~d~~~lp~-----~~~~fD~Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...++..++..++. .+++||+|+++.+++|. +...++.++.++| |||.++++..
T Consensus 86 ~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 86 ALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred HHHhccceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 11134555554443 25689999999999985 4567999999999 9999999743
No 107
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.47 E-value=8.3e-14 Score=125.86 Aligned_cols=116 Identities=11% Similarity=0.184 Sum_probs=86.0
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC------------C---------CcEEEccC------CCC--CCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN------------D---------PSVIACDM------SNT--PLNS 187 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~------------~---------~~~~~~d~------~~l--p~~~ 187 (294)
++.+|||||||+|..+..++ ..|+|+|+|+. . +.+.+.|+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46799999999997554332 37999999981 1 34667777 222 3567
Q ss_pred CCccEEEEcccccCC----CHHHHHHHHHHhcCcCcEEEEEeecCC----------------------------------
Q 022592 188 SSVDVAVFCLSLMGI----NFPNYLQEAQRVLKPSGWLLIAEVKSR---------------------------------- 229 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~----~~~~~l~el~r~LkpgG~l~i~e~~~~---------------------------------- 229 (294)
++||+|+|..++|+. +...++++++++|||||.|++......
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 899999999999862 567999999999999999998753210
Q ss_pred --CCCCC--C-----CCCHHHHHHHHHHCCCeEEEE
Q 022592 230 --FDPNT--G-----GADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 230 --~~~~~--~-----~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+.+.. . .++.+++..+++++||+++..
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~ 243 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDN 243 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEE
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEe
Confidence 00111 0 256789999999999999885
No 108
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.47 E-value=5.2e-13 Score=113.68 Aligned_cols=114 Identities=8% Similarity=0.045 Sum_probs=88.3
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------C-CCcEEEccCCCCCCCCCCccE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------N-DPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~-~~~~~~~d~~~lp~~~~~fD~ 192 (294)
++..+... ++.+|||||||+|.++..++ ..|+|+|+++ . ++.++.+|+.........||+
T Consensus 47 ~l~~l~~~-~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~ 125 (204)
T 3njr_A 47 TLAALAPR-RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEA 125 (204)
T ss_dssp HHHHHCCC-TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSE
T ss_pred HHHhcCCC-CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCE
Confidence 44555443 67799999999999988776 4899999997 2 678999999874333457999
Q ss_pred EEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 193 AVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 193 Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
|++..++ +.. ++.++.++|+|||.+++...... +...+...+++.||++.....
T Consensus 126 v~~~~~~---~~~-~l~~~~~~LkpgG~lv~~~~~~~--------~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 126 VFIGGGG---SQA-LYDRLWEWLAPGTRIVANAVTLE--------SETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp EEECSCC---CHH-HHHHHHHHSCTTCEEEEEECSHH--------HHHHHHHHHHHHCSEEEEEEE
T ss_pred EEECCcc---cHH-HHHHHHHhcCCCcEEEEEecCcc--------cHHHHHHHHHhCCCcEEEEEe
Confidence 9987754 566 99999999999999999764321 346778889999998877433
No 109
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=2.6e-13 Score=117.94 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC-------------CCCcEEEccCCC---CCCCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSN---TPLNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-------------~~~~~~~~d~~~---lp~~~~~fD~Vi~~~ 197 (294)
.|+.+|||+|||+|.++..++ ..|+|+|+++ .++..+.+|+.. .++..+++|+|++..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~ 155 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV 155 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec
Confidence 488999999999999999887 3799999997 467778887754 456678899987642
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCC-CCCHHHHHHHHHHCCCeEEEE
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTG-GADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~-~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
.++.+...++.++.++|||||.++++........... ........+.|+++||++++.
T Consensus 156 -~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 156 -AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp -CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred -cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE
Confidence 2334677899999999999999999753332211111 112244567789999998874
No 110
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.47 E-value=1.9e-13 Score=122.51 Aligned_cols=127 Identities=15% Similarity=0.235 Sum_probs=89.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccCCCCcE--------E---EccCCCCC---CCCCCcc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVSNDPSV--------I---ACDMSNTP---LNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~~~~~--------~---~~d~~~lp---~~~~~fD 191 (294)
..+++.+....++.+|||||||||.++..++ ..|+|+|+|+..+.+ . ..++..++ ++..+||
T Consensus 74 ~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 74 EKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred HHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCC
Confidence 4455555544466799999999999998775 389999999854432 1 22443333 3445699
Q ss_pred EEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCC-----CCC---------CCHHHHHHHHHHCCCeEEEEe
Q 022592 192 VAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN-----TGG---------ADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 192 ~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~-----~~~---------~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+|++..+++ +...++.++.|+|+|||.++++. .+.|... ..+ ...+++..++..+||.+....
T Consensus 154 ~v~~d~sf~--sl~~vL~e~~rvLkpGG~lv~lv-kPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 154 FASIDVSFI--SLNLILPALAKILVDGGQVVALV-KPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp EEEECCSSS--CGGGTHHHHHHHSCTTCEEEEEE-CGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEEeeHh--hHHHHHHHHHHHcCcCCEEEEEE-CcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 999987765 56889999999999999999972 2222111 011 366788899999999998866
Q ss_pred cc
Q 022592 258 FS 259 (294)
Q Consensus 258 ~~ 259 (294)
.+
T Consensus 231 ~s 232 (291)
T 3hp7_A 231 FS 232 (291)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 111
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=2.6e-13 Score=115.91 Aligned_cols=109 Identities=11% Similarity=0.117 Sum_probs=86.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCC--CCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp--~~~~~fD~Vi~~~~ 198 (294)
++.+|||||||+|.++..++ ..++|+|+|+ .++.++.+|+..++ +++++||+|++++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 46799999999999988776 3799999996 36789999999877 77889999999876
Q ss_pred ccCC---------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 199 LMGI---------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 199 l~~~---------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
..+. ....++.++.++|+|||.+++..-... ....+.+.+.++||.++...
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG--------LFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH--------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH--------HHHHHHHHHHHCCCeeeecc
Confidence 5442 236899999999999999998642111 12567788899999887754
No 112
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.45 E-value=1.4e-12 Score=106.38 Aligned_cols=115 Identities=17% Similarity=0.268 Sum_probs=89.3
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----CCCcEEEccCCCCC--------CCCCCccEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----NDPSVIACDMSNTP--------LNSSSVDVA 193 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----~~~~~~~~d~~~lp--------~~~~~fD~V 193 (294)
++..+....++.+|||+|||+|.++..++ ..++|+|+++ .++.+..+|+...+ +++++||+|
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 44444433467799999999999887764 3799999998 56778899998876 777899999
Q ss_pred EEcccccCC-CH-----------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 194 VFCLSLMGI-NF-----------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 194 i~~~~l~~~-~~-----------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
++..++++. +. ..++.++.++|+|||.+++..+... ....+...+... |..+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~-~~~~~ 157 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE--------GFDEYLREIRSL-FTKVK 157 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST--------THHHHHHHHHHH-EEEEE
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC--------cHHHHHHHHHHh-hhhEE
Confidence 999888874 33 6899999999999999999775432 346677777774 76665
No 113
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=8.7e-14 Score=117.73 Aligned_cols=134 Identities=15% Similarity=0.079 Sum_probs=90.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC--------------CCcEEEccCCCCCCCC---
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIACDMSNTPLNS--- 187 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~--------------~~~~~~~d~~~lp~~~--- 187 (294)
..+++.+....++.+|||+|||+|.++..++ ..++|+|+++. ++.++++|+.. ++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 97 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAE 97 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhh
Confidence 3345555442466799999999999988776 27999999983 34556666655 5555
Q ss_pred --CCccEEEEcccccCC-C--------------------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCC
Q 022592 188 --SSVDVAVFCLSLMGI-N--------------------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGAD 238 (294)
Q Consensus 188 --~~fD~Vi~~~~l~~~-~--------------------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~ 238 (294)
++||+|+++..+++. + ...++.++.++|+|||.+++.++.. ..
T Consensus 98 ~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~ 169 (215)
T 4dzr_A 98 RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH--------NQ 169 (215)
T ss_dssp TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT--------SC
T ss_pred ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC--------cc
Confidence 899999997665431 1 1678899999999999966655431 24
Q ss_pred HHHHHHHHH--HCCCeEEEE-eccCCeEEEEEEEECC
Q 022592 239 PNKFSKAVC--DLGFAPVSK-DFSNKMFIMFYFKKKE 272 (294)
Q Consensus 239 ~~~~~~~l~--~~Gf~~~~~-~~~~~~f~~i~~~k~~ 272 (294)
.+.+..++. +.||..+.. ........++.+++..
T Consensus 170 ~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 170 ADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp HHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred HHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 688899999 999977653 2333344555555543
No 114
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.44 E-value=7.5e-13 Score=116.38 Aligned_cols=87 Identities=18% Similarity=0.265 Sum_probs=74.7
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccCC---------CCcEEEccCCCCCCCCCCccEEEEcccccC--CCHHH
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN---------DPSVIACDMSNTPLNSSSVDVAVFCLSLMG--INFPN 206 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~---------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~--~~~~~ 206 (294)
++.+|||||||+|.++..++ ..|+|+|+|+. ...++.+|+..+++++++||+|++..+++| .++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 133 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDK 133 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccHHH
Confidence 56799999999999999887 37999999972 123889999999998899999999887765 47899
Q ss_pred HHHHHHHhcCcCcEEEEEeec
Q 022592 207 YLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~i~e~~ 227 (294)
+++++.++|+|||.+++....
T Consensus 134 ~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 134 AFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHcCCCeEEEEEeCC
Confidence 999999999999999997644
No 115
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.43 E-value=2.7e-13 Score=116.11 Aligned_cols=108 Identities=10% Similarity=0.155 Sum_probs=84.0
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCC--CCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp--~~~~~fD~Vi~~~~ 198 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..++ +++++||.|++.+.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 45699999999999998886 3799999997 36789999998876 77889999988765
Q ss_pred ccCC---------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 199 LMGI---------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 199 l~~~---------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
..|. ....++.++.++|+|||.|++...... ..+.+...+.+.||.....
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~--------~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG--------LFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH--------HHHHHHHHHHHHTCEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCccccc
Confidence 4432 136899999999999999998642111 1245677788889987664
No 116
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.43 E-value=4.1e-13 Score=110.56 Aligned_cols=113 Identities=16% Similarity=0.147 Sum_probs=85.6
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------C-CCcEEEccCCC-CCCCCC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------N-DPSVIACDMSN-TPLNSS 188 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~-~~~~~~~d~~~-lp~~~~ 188 (294)
.++..+... ++.+|||||||+|.++..++ ..|+|+|+++ . ++ ++.+|+.. ++..++
T Consensus 16 ~~~~~~~~~-~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 16 LAISALAPK-PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHCCC-TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHhccc-CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 345555433 66799999999999998775 3799999997 1 45 77777744 333337
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+||+|++..++++ ..+++++.++|+|||.+++..+... +...+..+++..|+++...
T Consensus 94 ~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 94 NPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVANAVTVE--------SEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp CCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEEECSHH--------HHHHHHHHHHHHCCEEEEE
T ss_pred CCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEEeeccc--------cHHHHHHHHHHcCCeeEEE
Confidence 8999999999887 7899999999999999999764321 3467788899999887764
No 117
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.43 E-value=2.5e-12 Score=128.21 Aligned_cols=140 Identities=11% Similarity=0.231 Sum_probs=104.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------------CCCcEEEccCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------------NDPSVIACDMSN 182 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------------~~~~~~~~d~~~ 182 (294)
+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+ .++.++++|+..
T Consensus 711 e~LLelL~~~-~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 711 EYALKHIRES-SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHHHHHHHS-CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred HHHHHHhccc-CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 4456666554 66799999999999999886 2689999997 136799999999
Q ss_pred CCCCCCCccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeecCCC----C--------------------C--C
Q 022592 183 TPLNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRF----D--------------------P--N 233 (294)
Q Consensus 183 lp~~~~~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~----~--------------------~--~ 233 (294)
+++++++||+|++..+++|.+. ..+++++.++|+|| .+++...+..+ . . .
T Consensus 790 Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DH 868 (950)
T 3htx_A 790 FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDH 868 (950)
T ss_dssp CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSC
T ss_pred CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCc
Confidence 9999999999999999999753 35899999999999 77776533211 0 0 1
Q ss_pred CCCCCHHHHHH----HHHHCCCeEEEEeccCCe-------EEEEEEEEC
Q 022592 234 TGGADPNKFSK----AVCDLGFAPVSKDFSNKM-------FIMFYFKKK 271 (294)
Q Consensus 234 ~~~~~~~~~~~----~l~~~Gf~~~~~~~~~~~-------f~~i~~~k~ 271 (294)
...++.++|.. +.+..||.+......... -.+.+|+|.
T Consensus 869 rFEWTReEFr~Wae~LAer~GYsVefvGVGDg~ep~vG~~TQiAVFtR~ 917 (950)
T 3htx_A 869 KFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRRE 917 (950)
T ss_dssp SCCBCHHHHHHHHHHHHHHTTEEEEEEEESSCSSSTTCCSEEEEEEEES
T ss_pred ceeecHHHHHHHHHHHHHhcCcEEEEEccCCCCCCCCCCccEEEEEEEC
Confidence 11257777776 778889988775544432 256677774
No 118
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.43 E-value=1.2e-12 Score=113.82 Aligned_cols=130 Identities=13% Similarity=0.072 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC-------------CCCcEEEccCCCCCC---CCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSNTPL---NSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-------------~~~~~~~~d~~~lp~---~~~~fD~Vi~~~ 197 (294)
.++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+..... ..++||+|++..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 477899999999999988776 2899999998 477888999876431 246899999875
Q ss_pred cccCCCHHHHH-HHHHHhcCcCcEEEEEeecCCCCCCC-CCCCHHHHHHHHHHCCCeEEEEecc---CCeEEEEEEEEC
Q 022592 198 SLMGINFPNYL-QEAQRVLKPSGWLLIAEVKSRFDPNT-GGADPNKFSKAVCDLGFAPVSKDFS---NKMFIMFYFKKK 271 (294)
Q Consensus 198 ~l~~~~~~~~l-~el~r~LkpgG~l~i~e~~~~~~~~~-~~~~~~~~~~~l~~~Gf~~~~~~~~---~~~f~~i~~~k~ 271 (294)
+. .+....+ ..+.++|||||.|+++.-....+... ..-......+.|+++||++.+.... ...++++++++.
T Consensus 155 a~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 155 AQ--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp CC--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred CC--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 53 4555544 45566999999999974222211110 1112255677888999999885443 334666666653
No 119
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.42 E-value=1.5e-12 Score=110.09 Aligned_cols=128 Identities=9% Similarity=0.039 Sum_probs=91.5
Q ss_pred HHHHHHHhhccC--CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCC
Q 022592 129 VNIIVKWLKDHS--PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLN 186 (294)
Q Consensus 129 ~~~~~~~l~~~~--~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~ 186 (294)
+..+++.+.... ++.+|||+|||+|.++..++ ..++|+|+|+ .++.++.+|+...+ +
T Consensus 51 ~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~ 129 (207)
T 1jsx_A 51 VRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-S 129 (207)
T ss_dssp HHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-C
T ss_pred HHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-c
Confidence 445566554331 46799999999999888776 3799999987 24788999998876 4
Q ss_pred CCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe-----ccCC
Q 022592 187 SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD-----FSNK 261 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-----~~~~ 261 (294)
.++||+|++... .++..++.++.++|+|||.+++..- ....+++..++. ||.++... ....
T Consensus 130 ~~~~D~i~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~---------~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~ 195 (207)
T 1jsx_A 130 EPPFDGVISRAF---ASLNDMVSWCHHLPGEQGRFYALKG---------QMPEDEIALLPE--EYQVESVVKLQVPALDG 195 (207)
T ss_dssp CSCEEEEECSCS---SSHHHHHHHHTTSEEEEEEEEEEES---------SCCHHHHHTSCT--TEEEEEEEEEECC--CC
T ss_pred cCCcCEEEEecc---CCHHHHHHHHHHhcCCCcEEEEEeC---------CCchHHHHHHhc--CCceeeeeeeccCCCCC
Confidence 578999997532 4678999999999999999999631 124466666655 99887622 1234
Q ss_pred eEEEEEEEEC
Q 022592 262 MFIMFYFKKK 271 (294)
Q Consensus 262 ~f~~i~~~k~ 271 (294)
...+++++|.
T Consensus 196 ~~~~~~~~k~ 205 (207)
T 1jsx_A 196 ERHLVVIKAN 205 (207)
T ss_dssp EEEEEEEEEC
T ss_pred ceEEEEEEec
Confidence 4555555554
No 120
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.41 E-value=7.2e-13 Score=109.51 Aligned_cols=103 Identities=19% Similarity=0.182 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCcccHHHHHhccceEEEeccC-----------CCCcEEEccCCCCCC---CCCCccEEEEcccccCC--C
Q 022592 140 SPSLVIADFGCGDARLAKSVKNKVFSFDLVS-----------NDPSVIACDMSNTPL---NSSSVDVAVFCLSLMGI--N 203 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~~v~gvD~s~-----------~~~~~~~~d~~~lp~---~~~~fD~Vi~~~~l~~~--~ 203 (294)
.++.+|||||||... +|+|+ .++.+..+|+.++++ ++++||+|+++.+++|. +
T Consensus 11 ~~g~~vL~~~~g~v~-----------vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~ 79 (176)
T 2ld4_A 11 SAGQFVAVVWDKSSP-----------VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLH 79 (176)
T ss_dssp CTTSEEEEEECTTSC-----------HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCC
T ss_pred CCCCEEEEecCCcee-----------eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccC
Confidence 367899999999732 44443 358899999999887 78999999999999985 8
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecCCCC-CCCCCCCHHHHHHHHHHCCCeEE
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKSRFD-PNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~~~~-~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
+..++++++|+|||||.|++.+...... ......+.+++..+|+++|| +.
T Consensus 80 ~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 80 SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 8999999999999999999965322111 11122478999999999999 54
No 121
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=5.9e-13 Score=115.14 Aligned_cols=125 Identities=13% Similarity=0.111 Sum_probs=87.0
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC-------------CCCcEEEccCCC---CCCCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSN---TPLNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-------------~~~~~~~~d~~~---lp~~~~~fD~Vi~~~~ 198 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+.. +++.+++||+|++...
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 56799999999999888775 3799999994 467899999987 4556788999998654
Q ss_pred ccCCCH-HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHH----HHHHHHCCCeEEEEec---cCCeEEEEEEEE
Q 022592 199 LMGINF-PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKF----SKAVCDLGFAPVSKDF---SNKMFIMFYFKK 270 (294)
Q Consensus 199 l~~~~~-~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~----~~~l~~~Gf~~~~~~~---~~~~f~~i~~~k 270 (294)
..+. ..++.++.++|+|||.+++........ . ......+ .++|+++||+++.... ....++++++++
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~--~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVISIKANCID-S--TASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVY 231 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-S--SSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEEEE
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-c--CCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEEEe
Confidence 3333 456888999999999999953321100 0 0111111 5788999999988332 222355666554
No 122
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.41 E-value=1.4e-12 Score=116.17 Aligned_cols=124 Identities=14% Similarity=0.179 Sum_probs=92.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcc---cHHHHHhc-----cceEEEeccC-------------CCCcEEEccCCCCC----
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGD---ARLAKSVK-----NKVFSFDLVS-------------NDPSVIACDMSNTP---- 184 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~---G~~~~~l~-----~~v~gvD~s~-------------~~~~~~~~d~~~lp---- 184 (294)
..++..+.......+|||||||+ |.++..+. .+|+++|+|+ .++.++.+|+.+.+
T Consensus 66 ~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~ 145 (274)
T 2qe6_A 66 VRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILN 145 (274)
T ss_dssp HHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHH
T ss_pred HHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhc
Confidence 34555554222346999999999 98766553 4899999987 36789999997631
Q ss_pred -------CCCCCccEEEEcccccCC-C--HHHHHHHHHHhcCcCcEEEEEeecCCC--------------CCCCCCCCHH
Q 022592 185 -------LNSSSVDVAVFCLSLMGI-N--FPNYLQEAQRVLKPSGWLLIAEVKSRF--------------DPNTGGADPN 240 (294)
Q Consensus 185 -------~~~~~fD~Vi~~~~l~~~-~--~~~~l~el~r~LkpgG~l~i~e~~~~~--------------~~~~~~~~~~ 240 (294)
++..+||+|++..+|||. + +..+++++.++|+|||.|++.++.... ......++.+
T Consensus 146 ~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 225 (274)
T 2qe6_A 146 HPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPE 225 (274)
T ss_dssp SHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHH
T ss_pred cchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHH
Confidence 333589999999999995 3 789999999999999999999876531 0112235888
Q ss_pred HHHHHHHHCCCeEEE
Q 022592 241 KFSKAVCDLGFAPVS 255 (294)
Q Consensus 241 ~~~~~l~~~Gf~~~~ 255 (294)
++..+| .||++++
T Consensus 226 ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 226 EIERQF--GDFELVE 238 (274)
T ss_dssp HHHHTT--TTCEECT
T ss_pred HHHHHh--CCCeEcc
Confidence 898888 5887765
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.41 E-value=9e-13 Score=109.30 Aligned_cols=113 Identities=20% Similarity=0.335 Sum_probs=86.8
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCC-CCc
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNS-SSV 190 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~-~~f 190 (294)
.++..+.. .++.+|||+|||+|.++..++ ..|+|+|+++ .++.+..+|+.. +++. ++|
T Consensus 24 ~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~ 101 (192)
T 1l3i_A 24 LIMCLAEP-GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDI 101 (192)
T ss_dssp HHHHHHCC-CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCE
T ss_pred HHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCC
Confidence 34444443 367799999999999988887 4799999987 256788888766 3333 589
Q ss_pred cEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 191 DVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 191 D~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|+|++..+++ +...++.++.++|+|||.+++...... +...+..++++.||.+..
T Consensus 102 D~v~~~~~~~--~~~~~l~~~~~~l~~gG~l~~~~~~~~--------~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 102 DIAVVGGSGG--ELQEILRIIKDKLKPGGRIIVTAILLE--------TKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp EEEEESCCTT--CHHHHHHHHHHTEEEEEEEEEEECBHH--------HHHHHHHHHHHTTCCCEE
T ss_pred CEEEECCchH--HHHHHHHHHHHhcCCCcEEEEEecCcc--------hHHHHHHHHHHCCCceEE
Confidence 9999987765 468999999999999999999764321 346788899999996544
No 124
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.41 E-value=1.1e-12 Score=115.32 Aligned_cols=119 Identities=18% Similarity=0.308 Sum_probs=92.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccCC------------C--CcEEEccCCCCCCCCCCccEEEEcccccCC
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN------------D--PSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~------------~--~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~ 202 (294)
.++.+|||+|||+|.++..++ ..|+|+|+++. . +.+..+|+... +++++||+|+++...+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~-- 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAE-- 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHH--
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHH--
Confidence 356799999999999988776 38999999982 1 67778777652 4467899999875443
Q ss_pred CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEE
Q 022592 203 NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKK 270 (294)
Q Consensus 203 ~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k 270 (294)
....++.++.++|+|||.++++.+... ..+.+..+++++||.++...... .+..+.++|
T Consensus 196 ~~~~~l~~~~~~LkpgG~lils~~~~~--------~~~~v~~~l~~~Gf~~~~~~~~~-~W~~l~~~k 254 (254)
T 2nxc_A 196 LHAALAPRYREALVPGGRALLTGILKD--------RAPLVREAMAGAGFRPLEEAAEG-EWVLLAYGR 254 (254)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeeccC--------CHHHHHHHHHHCCCEEEEEeccC-CeEEEEEEC
Confidence 246889999999999999999875432 45889999999999998866544 455666654
No 125
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.40 E-value=1.2e-13 Score=120.29 Aligned_cols=127 Identities=15% Similarity=0.218 Sum_probs=81.6
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccCCCCcE--------EE---ccCCCCC---CCCCCc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVSNDPSV--------IA---CDMSNTP---LNSSSV 190 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~~~~~--------~~---~d~~~lp---~~~~~f 190 (294)
+..++..+.....+.+|||||||+|.++..++ ..|+|+|+|+..+.. .. .++..+. ++...+
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRP 104 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCC
Confidence 34556666554456799999999999998776 389999999854332 11 1111111 111124
Q ss_pred cEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCC--------------CCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 191 DVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDP--------------NTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 191 D~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
|.+.+..++. +...++.++.++|+|||.+++.. .+.+.. .....+.+++..+++++||.+...
T Consensus 105 d~~~~D~v~~--~l~~~l~~i~rvLkpgG~lv~~~-~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 105 SFTSIDVSFI--SLDLILPPLYEILEKNGEVAALI-KPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp SEEEECCSSS--CGGGTHHHHHHHSCTTCEEEEEE-CHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CEEEEEEEhh--hHHHHHHHHHHhccCCCEEEEEE-CcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 5554444433 23789999999999999999962 111110 000136678999999999999886
Q ss_pred ec
Q 022592 257 DF 258 (294)
Q Consensus 257 ~~ 258 (294)
..
T Consensus 182 ~~ 183 (232)
T 3opn_A 182 TF 183 (232)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 126
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.40 E-value=3.5e-12 Score=107.54 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=81.0
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC----CCCcEEEccCCCCCCC-------C----CCccEEEEcccccC
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----NDPSVIACDMSNTPLN-------S----SSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----~~~~~~~~d~~~lp~~-------~----~~fD~Vi~~~~l~~ 201 (294)
.++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+.+.. . ++||+|++......
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~ 103 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKV 103 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCC
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCC
Confidence 467899999999999999987 4799999998 4789999999886521 1 48999999765432
Q ss_pred C-----C-------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 202 I-----N-------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 202 ~-----~-------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
. + ...++..+.++|+|||.|++..+... ....+...++. .|..+.
T Consensus 104 ~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~--------~~~~~~~~l~~-~F~~v~ 160 (191)
T 3dou_A 104 SGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD--------MTNDFIAIWRK-NFSSYK 160 (191)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--------HHHHHHHHHGG-GEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC--------CHHHHHHHHHH-hcCEEE
Confidence 1 1 24678889999999999998765432 23567777754 587766
No 127
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.39 E-value=2.4e-12 Score=114.33 Aligned_cols=105 Identities=16% Similarity=0.267 Sum_probs=82.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccc-
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL- 199 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l- 199 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+... +++++||+|+++..+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCB
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCC
Confidence 56799999999999988776 3799999997 2578889998763 446789999998433
Q ss_pred ------------cCC-------------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 200 ------------MGI-------------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 200 ------------~~~-------------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
+|. ....++.++.++|+|||++++.. +....+.+.++++++||..+
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~---------~~~~~~~~~~~l~~~Gf~~v 258 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH---------GWQQGEAVRQAFILAGYHDV 258 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC---------CSSCHHHHHHHHHHTTCTTC
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE---------CchHHHHHHHHHHHCCCcEE
Confidence 221 23678899999999999999852 12356889999999999765
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 259 ~ 259 (276)
T 2b3t_A 259 E 259 (276)
T ss_dssp C
T ss_pred E
Confidence 5
No 128
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.39 E-value=1.1e-12 Score=113.44 Aligned_cols=118 Identities=12% Similarity=0.125 Sum_probs=78.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCCCCCC-CCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNTPLN-SSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~lp~~-~~~fD~Vi~ 195 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+|.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 56799999999999998886 2799999993 2467888999888632 134444444
Q ss_pred ccccc----C--CCHHHHHHHHHHhcCcCcEEEEEe-ecCCCCC------CCCCCCHH-----HHHHHHHHCCCeEEEEe
Q 022592 196 CLSLM----G--INFPNYLQEAQRVLKPSGWLLIAE-VKSRFDP------NTGGADPN-----KFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 196 ~~~l~----~--~~~~~~l~el~r~LkpgG~l~i~e-~~~~~~~------~~~~~~~~-----~~~~~l~~~Gf~~~~~~ 257 (294)
.+... + .+...++.++.|+|||||.++++. +...+.. ..+.++.. ++..+++++||+++...
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeee
Confidence 33221 1 245678999999999999999932 2221110 11112333 38889999999998755
Q ss_pred c
Q 022592 258 F 258 (294)
Q Consensus 258 ~ 258 (294)
.
T Consensus 184 ~ 184 (225)
T 3p2e_A 184 E 184 (225)
T ss_dssp E
T ss_pred e
Confidence 4
No 129
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=4e-12 Score=109.31 Aligned_cols=125 Identities=20% Similarity=0.201 Sum_probs=86.4
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC-------------CCCcEEEccCCCCC---CCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS-------------NDPSVIACDMSNTP---LNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-------------~~~~~~~~d~~~lp---~~~~~fD~Vi~~~~ 198 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+.... ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 56799999999999888775 3799999998 36789999998732 12358999997654
Q ss_pred ccCCCHH-HHHHHHHHhcCcCcEEEEEeecCCCCCCCC---CCCHHHHHHHHHHCCCeEEEEeccCCe---EEEEEEEE
Q 022592 199 LMGINFP-NYLQEAQRVLKPSGWLLIAEVKSRFDPNTG---GADPNKFSKAVCDLGFAPVSKDFSNKM---FIMFYFKK 270 (294)
Q Consensus 199 l~~~~~~-~~l~el~r~LkpgG~l~i~e~~~~~~~~~~---~~~~~~~~~~l~~~Gf~~~~~~~~~~~---f~~i~~~k 270 (294)
..+.. .++.++.++|+|||.+++. +......... .+...++..+ .++ |+++.......+ .+++++++
T Consensus 153 --~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 153 --QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp --STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred --CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 33433 4599999999999999998 4332211111 1233455555 777 999875443322 66776664
No 130
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.9e-12 Score=106.66 Aligned_cols=112 Identities=13% Similarity=0.220 Sum_probs=89.2
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCCCCCCcc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
..++..+... ++.+|||+|||+|.++..++ ..++|+|+++ .++.++.+|+.+ ++++++||
T Consensus 25 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D 102 (183)
T 2yxd_A 25 AVSIGKLNLN-KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFN 102 (183)
T ss_dssp HHHHHHHCCC-TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCS
T ss_pred HHHHHHcCCC-CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCc
Confidence 3455555433 66799999999999998886 4899999997 357888999877 66778899
Q ss_pred EEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 192 VAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 192 ~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+|++..+ .+...++.++.++ |||.+++...... +...+.+.++++||.+...
T Consensus 103 ~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~~--------~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 103 KAFIGGT---KNIEKIIEILDKK--KINHIVANTIVLE--------NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp EEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCHH--------HHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCc---ccHHHHHHHHhhC--CCCEEEEEecccc--------cHHHHHHHHHHcCCeEEEE
Confidence 9999888 6778999999998 9999999864321 3467889999999977664
No 131
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.38 E-value=5.4e-13 Score=112.07 Aligned_cols=117 Identities=18% Similarity=0.220 Sum_probs=84.4
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCC-CCCCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTP-LNSSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp-~~~~~fD~Vi~~~ 197 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+..++ +.+++||+|++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 66799999999999888775 2799999997 25788999988775 5568899999987
Q ss_pred cccC-------C---CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHH---HHCCCeEEEEeccC
Q 022592 198 SLMG-------I---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAV---CDLGFAPVSKDFSN 260 (294)
Q Consensus 198 ~l~~-------~---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l---~~~Gf~~~~~~~~~ 260 (294)
.+.. . +...++.++.++|+|||.+++..+...... ......+..++ ...+|.+....+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~v~~~~~~~ 174 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTG---FEEKEKVLEFLKGVDQKKFIVQRTDFIN 174 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTB---SHHHHHHHHHHTTSCTTTEEEEEEEETT
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCc---HHHHHHHHHHHHhCCCCcEEEEEEEecc
Confidence 6621 1 345799999999999999999875432111 11123334444 45678888765543
No 132
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.38 E-value=9.2e-13 Score=115.72 Aligned_cols=123 Identities=13% Similarity=0.030 Sum_probs=92.1
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCCCCC---CCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNTPLN---SSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~---~~~fD~Vi~~~ 197 (294)
++.+|||||||+|..+..++ ..|+++|+|+ .++.++.+|+++++.. .++||+|++..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 46799999999999887765 3799999997 3688999999887643 47899999865
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec-----cCCeEEEEEEEECC
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF-----SNKMFIMFYFKKKE 272 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-----~~~~f~~i~~~k~~ 272 (294)
+ .+...++..+.++|+|||.+++..-. ... -...++...+...||.+..... ......+++++|..
T Consensus 160 ~---~~~~~ll~~~~~~LkpgG~l~~~~g~-~~~-----~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~ 230 (249)
T 3g89_A 160 V---APLCVLSELLLPFLEVGGAAVAMKGP-RVE-----EELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTA 230 (249)
T ss_dssp S---CCHHHHHHHHGGGEEEEEEEEEEECS-CCH-----HHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred c---CCHHHHHHHHHHHcCCCeEEEEEeCC-CcH-----HHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCC
Confidence 4 46789999999999999999986411 110 1223466778889998877331 23566777788765
No 133
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.37 E-value=1.3e-12 Score=109.19 Aligned_cols=88 Identities=10% Similarity=0.062 Sum_probs=73.2
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCC--CCCCCccEEEEcccc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSSSVDVAVFCLSL 199 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp--~~~~~fD~Vi~~~~l 199 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+++ +++++||+|++...+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 66799999999999988655 3799999997 26789999987754 446889999999888
Q ss_pred cCC--CHHHHHHHHHH--hcCcCcEEEEEeecC
Q 022592 200 MGI--NFPNYLQEAQR--VLKPSGWLLIAEVKS 228 (294)
Q Consensus 200 ~~~--~~~~~l~el~r--~LkpgG~l~i~e~~~ 228 (294)
++. +...++.++.+ +|+|||.+++.....
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 773 67899999999 999999999975443
No 134
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.37 E-value=2.8e-13 Score=126.20 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=78.7
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----c-ceEEEeccC------------------------CCCcEEEcc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----N-KVFSFDLVS------------------------NDPSVIACD 179 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~-~v~gvD~s~------------------------~~~~~~~~d 179 (294)
+..++..+... ++.+|||||||+|.++..++ . .|+|+|+++ .++.++.+|
T Consensus 162 i~~il~~l~l~-~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 162 VAQMIDEIKMT-DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHHCCC-TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHHhcCCC-CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 44455555443 77899999999999988776 2 599999985 357899999
Q ss_pred CCCCCCCC--CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 180 MSNTPLNS--SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 180 ~~~lp~~~--~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+.++|+.+ ..||+|+++..+++.+....|.+++++|||||.|++.+.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred ccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 99988754 479999998777656888999999999999999999753
No 135
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.36 E-value=7.4e-12 Score=111.59 Aligned_cols=109 Identities=13% Similarity=0.161 Sum_probs=86.7
Q ss_pred CCCEEEEEcCcccHHHHHhc---c-ceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK---N-KVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~-~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~ 200 (294)
++.+|||+|||+|.++..++ . .|+|+|+|+ .++.++.+|+.+++. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 57899999999999998886 2 599999997 236789999998876 678999998644
Q ss_pred CCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 201 GINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 201 ~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.+...++.++.++|+|||.+++.+....... .....+.+...++++||.+..
T Consensus 202 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 -VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTTTHHHHHHHHHHTTCEEEE
T ss_pred -hhHHHHHHHHHHHCCCCeEEEEEEeeccccc--cccHHHHHHHHHHHcCCeeEE
Confidence 3456889999999999999999876542111 123567889999999998765
No 136
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.35 E-value=2.9e-12 Score=114.86 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=70.3
Q ss_pred ccCCCCEEEEEcCcccHHHHH-hc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcc
Q 022592 138 DHSPSLVIADFGCGDARLAKS-VK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCL 197 (294)
Q Consensus 138 ~~~~~~~VLDiGcG~G~~~~~-l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~ 197 (294)
...++.+|||||||+|.++.. ++ .+|+|+|+++ .++.++++|+..+| +++||+|++..
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECC
Confidence 335788999999999976533 22 4899999997 36789999998876 68899999765
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
. ..+...+++++.++|||||.|++.+..
T Consensus 197 ~--~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 197 L--AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp T--CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred C--ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 4 358889999999999999999998643
No 137
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.35 E-value=1e-12 Score=121.98 Aligned_cols=121 Identities=10% Similarity=0.092 Sum_probs=85.9
Q ss_pred cChhhHHHHHHhHHhhhcc-CC--CcHHHHHHHHhhccCCCCEEEEEcCc------ccHHHHHhc------cceEEEecc
Q 022592 105 ENPALFDMYHSGYQEQMSH-WP--ELPVNIIVKWLKDHSPSLVIADFGCG------DARLAKSVK------NKVFSFDLV 169 (294)
Q Consensus 105 ~~~~~~d~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~~~~~~VLDiGcG------~G~~~~~l~------~~v~gvD~s 169 (294)
.....|+.....|...... |. ....+.++..+. .+..+||||||| +|..+..++ ..|+|+|+|
T Consensus 179 s~~~~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiS 256 (419)
T 3sso_A 179 SRKPDLSELSSRYFTPKFGFLHWFTPHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIM 256 (419)
T ss_dssp CCCCCHHHHHHHTTCTTBSSSCBCHHHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCccHHHHHHHhCCCcccccchHHHHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECC
Confidence 3344566666666433222 21 123333444333 245699999999 555444333 379999999
Q ss_pred C------CCCcEEEccCCCCCCC------CCCccEEEEcccccC-CCHHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 170 S------NDPSVIACDMSNTPLN------SSSVDVAVFCLSLMG-INFPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 170 ~------~~~~~~~~d~~~lp~~------~~~fD~Vi~~~~l~~-~~~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
+ .++.++++|+.++|+. +++||+|++..+ ++ .+...++++++++|||||++++.++..
T Consensus 257 p~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 257 DKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred HHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 8 4788999999998877 689999998754 44 478899999999999999999998764
No 138
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.35 E-value=7.8e-12 Score=108.28 Aligned_cols=121 Identities=14% Similarity=0.129 Sum_probs=93.0
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~ 198 (294)
+++.+|||||||+|.++..++ ..|+|+|+++ +++.+..+|......+.+.||+|+....
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 366799999999999998886 2799999997 3588999999876655557999886544
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe---ccCCeEEEEEEEEC
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD---FSNKMFIMFYFKKK 271 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~---~~~~~f~~i~~~k~ 271 (294)
.- .-...++.+..+.|+++|.|++.... ..+.+.++|.+.||.++... ....+|.++.+++.
T Consensus 100 Gg-~lI~~IL~~~~~~l~~~~~lIlqp~~----------~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 100 GG-RLIADILNNDIDKLQHVKTLVLQPNN----------REDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp CH-HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred ch-HHHHHHHHHHHHHhCcCCEEEEECCC----------ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 22 12457788888999999999997632 46899999999999998844 34556777777664
No 139
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.34 E-value=1.6e-12 Score=117.47 Aligned_cols=125 Identities=17% Similarity=0.199 Sum_probs=93.3
Q ss_pred HHHHhhcc-CCCCEEEEEcCcccHHHHHhc----cceEEEeccCC----------------------CCcEEEccCCCCC
Q 022592 132 IVKWLKDH-SPSLVIADFGCGDARLAKSVK----NKVFSFDLVSN----------------------DPSVIACDMSNTP 184 (294)
Q Consensus 132 ~~~~l~~~-~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~----------------------~~~~~~~d~~~lp 184 (294)
+++.+... .++.+|||||||+|.++..++ ..++|+|+|+. ++.++++|+..++
T Consensus 24 ~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 103 (313)
T 3bgv_A 24 FLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKEL 103 (313)
T ss_dssp HHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSC
T ss_pred HHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccc
Confidence 44444332 255799999999999888776 37999999872 4678999998876
Q ss_pred ----CC--CCCccEEEEcccccCC--C---HHHHHHHHHHhcCcCcEEEEEeecC-----------------C-----CC
Q 022592 185 ----LN--SSSVDVAVFCLSLMGI--N---FPNYLQEAQRVLKPSGWLLIAEVKS-----------------R-----FD 231 (294)
Q Consensus 185 ----~~--~~~fD~Vi~~~~l~~~--~---~~~~l~el~r~LkpgG~l~i~e~~~-----------------~-----~~ 231 (294)
++ +++||+|++..++||. + +..++.++.++|+|||.+++..+.. . +.
T Consensus 104 ~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~ 183 (313)
T 3bgv_A 104 LIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQ 183 (313)
T ss_dssp STTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEES
T ss_pred hhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeC
Confidence 53 4589999999999884 3 4689999999999999999975421 0 11
Q ss_pred CC--C-------------------CCCCHHHHHHHHHHCCCeEEEE
Q 022592 232 PN--T-------------------GGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 232 ~~--~-------------------~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
.. . ...+.+++..++++.||+++..
T Consensus 184 ~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~ 229 (313)
T 3bgv_A 184 KKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYK 229 (313)
T ss_dssp CSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEE
T ss_pred CCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEe
Confidence 10 0 0146788999999999999873
No 140
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=5.8e-12 Score=109.98 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=88.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~ 187 (294)
..++..+... ++.+|||+|||+|.++..++ ..|+++|+++ .++.+..+|+.+.++++
T Consensus 86 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLA-PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCC-CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 3455555433 67799999999999887765 3799999986 35778899998887888
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
++||+|++. ..++..++.++.++|+|||.+++...... ...++...+++.||..+..
T Consensus 165 ~~~D~v~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 165 AAYDGVALD----LMEPWKVLEKAALALKPDRFLVAYLPNIT--------QVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp TCEEEEEEE----SSCGGGGHHHHHHHEEEEEEEEEEESCHH--------HHHHHHHHHTTTTEEEEEE
T ss_pred CCcCEEEEC----CcCHHHHHHHHHHhCCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCceEEE
Confidence 899999973 34667899999999999999999763211 2356778888899987763
No 141
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.33 E-value=2.7e-12 Score=111.82 Aligned_cols=108 Identities=13% Similarity=0.096 Sum_probs=81.4
Q ss_pred CCCEEEEEcCcccHHHHHhc---------cceEEEeccCC----------CCcEEEccCCCC---CCCC-CCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK---------NKVFSFDLVSN----------DPSVIACDMSNT---PLNS-SSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---------~~v~gvD~s~~----------~~~~~~~d~~~l---p~~~-~~fD~Vi~~~ 197 (294)
++.+|||||||+|..+..++ .+|+|+|+++. ++.++.+|+... +... .+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 45699999999999877653 47999999983 578899999874 5433 4799999866
Q ss_pred cccCCCHHHHHHHHHH-hcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC--CCeEE
Q 022592 198 SLMGINFPNYLQEAQR-VLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL--GFAPV 254 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r-~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~--Gf~~~ 254 (294)
. |.+...++.++.+ +|+|||+|++.++...+ ..++...+..+++.. +|.++
T Consensus 161 ~--~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~----~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 161 A--HANTFNIMKWAVDHLLEEGDYFIIEDMIPYW----YRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp S--CSSHHHHHHHHHHHTCCTTCEEEECSCHHHH----HHHCHHHHHHHHHTTTTTEEEE
T ss_pred c--hHhHHHHHHHHHHhhCCCCCEEEEEeCcccc----cccCHHHHHHHHHhCcccEEEc
Confidence 5 5688899999997 99999999997652111 112445778888887 56654
No 142
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.32 E-value=2.5e-12 Score=114.25 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=83.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCCCCCCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~ 189 (294)
++..+.. .++.+|||+|||+|.++..++ ..|+|+|+++ .++.+..+|+.. ++++++
T Consensus 102 ~~~~~~~-~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~ 179 (275)
T 1yb2_A 102 IIMRCGL-RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQM 179 (275)
T ss_dssp ----CCC-CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCC
T ss_pred HHHHcCC-CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCC
Confidence 4444433 367799999999999887765 3799999986 246788899887 666788
Q ss_pred ccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
||+|++ +..++..++.++.++|+|||.+++...... ....+.+.+++.||..+..
T Consensus 180 fD~Vi~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--------~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 180 YDAVIA----DIPDPWNHVQKIASMMKPGSVATFYLPNFD--------QSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp EEEEEE----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH--------HHHHHHHHSGGGTEEEEEE
T ss_pred ccEEEE----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCeEEEE
Confidence 999998 234778999999999999999999863211 2366778888999988763
No 143
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=1.6e-11 Score=108.29 Aligned_cols=123 Identities=14% Similarity=0.176 Sum_probs=90.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccC-----------C--------CCcEEEccCCCC-------CCCCC
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-----------N--------DPSVIACDMSNT-------PLNSS 188 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-----------~--------~~~~~~~d~~~l-------p~~~~ 188 (294)
.++.+|||+|||+|.++..++ ..|+|+|+++ . ++.++.+|+.+. +++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 356799999999999988776 3799999986 1 267899999886 35678
Q ss_pred CccEEEEcccccC-------------------CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC
Q 022592 189 SVDVAVFCLSLMG-------------------INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL 249 (294)
Q Consensus 189 ~fD~Vi~~~~l~~-------------------~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~ 249 (294)
+||+|+++..+.. .+...++..+.++|+|||.|+++.-.. ...++...+.+.
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~ 185 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACGSR 185 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHTTT
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHHhc
Confidence 9999999844332 146789999999999999999863211 346777888774
Q ss_pred CCeEEEEec------cCCeEEEEEEEECC
Q 022592 250 GFAPVSKDF------SNKMFIMFYFKKKE 272 (294)
Q Consensus 250 Gf~~~~~~~------~~~~f~~i~~~k~~ 272 (294)
|....+.. .....+++.++|..
T Consensus 186 -~~~~~i~~v~~~~~~~~~~~lv~~~k~~ 213 (260)
T 2ozv_A 186 -FGGLEITLIHPRPGEDAVRMLVTAIKGS 213 (260)
T ss_dssp -EEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred -CCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence 76655322 33456788888754
No 144
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.31 E-value=1.9e-11 Score=105.61 Aligned_cols=120 Identities=15% Similarity=0.132 Sum_probs=90.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCC-CCCCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSN-TPLNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~-lp~~~~~fD~Vi~~~ 197 (294)
+++.+|||||||+|.++..++ ..|+|+|+++ +++.+..+|... ++. .+.||+|+...
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcC
Confidence 366799999999999998886 2799999997 257889999854 432 23699988754
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe---ccCCeEEEEEEEEC
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD---FSNKMFIMFYFKKK 271 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~---~~~~~f~~i~~~k~ 271 (294)
+.- .-...++.++...|+|+|+|++.... ..+.+.++|.+.||.++... ....+|.++.+++.
T Consensus 93 ~Gg-~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~ 158 (225)
T 3kr9_A 93 MGG-RLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAG 158 (225)
T ss_dssp ECH-HHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEES
T ss_pred CCh-HHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 411 12468889999999999999986431 45889999999999998843 34555667776654
No 145
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.30 E-value=1.7e-12 Score=108.83 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=92.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccCC------------CC--cEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN------------DP--SVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~------------~~--~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
+..+|||||||+|.++..++ ..|+|+|+++. .+ .+..+|.... .+.++||+|++..+||+
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHh
Confidence 56799999999999999884 48999999981 12 3455666544 35678999999999999
Q ss_pred C-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC--CCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEE
Q 022592 202 I-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN--TGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMF 266 (294)
Q Consensus 202 ~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i 266 (294)
. +....+..+.+.|+|||.++-.+..+-..+. ........|...+...++.+....+.+..+|++
T Consensus 128 L~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~nEl~y~~ 195 (200)
T 3fzg_A 128 LKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNELVYIT 195 (200)
T ss_dssp HHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEETTEEEEEE
T ss_pred hhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeCceEEEEE
Confidence 6 4556777999999999999988743332222 222344667777766667777788899888877
No 146
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.30 E-value=1.4e-11 Score=107.51 Aligned_cols=122 Identities=15% Similarity=0.052 Sum_probs=92.8
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~ 198 (294)
+++.+|||||||+|.++..++ ..|+|+|+++ +++.+..+|......+..+||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 366799999999999998886 2799999997 2478999998876554446999887543
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE---EeccCCeEEEEEEEECC
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS---KDFSNKMFIMFYFKKKE 272 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~---~~~~~~~f~~i~~~k~~ 272 (294)
.- .-...++.+..+.|+++|+|++.... ..+.+.++|.+.||.++. +......|.++.+++..
T Consensus 100 Gg-~lI~~IL~~~~~~L~~~~~lIlq~~~----------~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~~ 165 (244)
T 3gnl_A 100 GG-TLIRTILEEGAAKLAGVTKLILQPNI----------AAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPSE 165 (244)
T ss_dssp CH-HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEECS
T ss_pred ch-HHHHHHHHHHHHHhCCCCEEEEEcCC----------ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 21 12457888889999999999997532 458899999999999976 33455566677776653
No 147
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.30 E-value=5.1e-12 Score=107.15 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=74.4
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCCCCCCc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~f 190 (294)
+..++..+... ++.+|||||||+|.++..++ ..|+++|+++ .++.+..+|+...+.+.++|
T Consensus 66 ~~~~~~~l~~~-~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 66 VARMTELLELT-PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHHhcCCC-CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 34455555444 67899999999999988886 4899999987 35789999998876667899
Q ss_pred cEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 191 DVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 191 D~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
|+|++..++++... ++.++|+|||++++..
T Consensus 145 D~i~~~~~~~~~~~-----~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT-----ALMTQLDEGGILVLPV 174 (210)
T ss_dssp EEEEESSBCSSCCT-----HHHHTEEEEEEEEEEE
T ss_pred cEEEEccchhhhhH-----HHHHhcccCcEEEEEE
Confidence 99999999988642 5899999999999964
No 148
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.30 E-value=5.5e-12 Score=116.08 Aligned_cols=83 Identities=19% Similarity=0.242 Sum_probs=71.3
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+..+++++++||+|++..+.++
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 56799999999999988886 3899999996 2378999999999998899999999765433
Q ss_pred ----CCHHHHHHHHHHhcCcCcEEEE
Q 022592 202 ----INFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 202 ----~~~~~~l~el~r~LkpgG~l~i 223 (294)
.+...++.++.++|+|||.++.
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 3788999999999999999875
No 149
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=6.9e-12 Score=116.80 Aligned_cols=85 Identities=14% Similarity=0.221 Sum_probs=73.8
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEcccccC--
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-- 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~-- 201 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ ..+.++.+|+...+.++++||+|+++..+++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 56799999999999998887 4899999997 1478999999988777789999999999987
Q ss_pred ---C-CHHHHHHHHHHhcCcCcEEEEEe
Q 022592 202 ---I-NFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 ---~-~~~~~l~el~r~LkpgG~l~i~e 225 (294)
. +...++.++.++|+|||.++++.
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 2 45689999999999999999974
No 150
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.29 E-value=7.9e-12 Score=104.59 Aligned_cols=107 Identities=17% Similarity=0.299 Sum_probs=78.4
Q ss_pred CCCCEEEEEcCcccHHHHHhc--------------cceEEEeccCC----CCcEE-EccCCCCC--------CCCCCccE
Q 022592 140 SPSLVIADFGCGDARLAKSVK--------------NKVFSFDLVSN----DPSVI-ACDMSNTP--------LNSSSVDV 192 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~--------------~~v~gvD~s~~----~~~~~-~~d~~~lp--------~~~~~fD~ 192 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+. ++.++ .+|+...+ +++++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~ 100 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADV 100 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcE
Confidence 467899999999999888775 35899999983 46788 88887643 34568999
Q ss_pred EEEcccccCC-----CH-------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 193 AVFCLSLMGI-----NF-------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 193 Vi~~~~l~~~-----~~-------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|++..+++.. +. ..++.++.++|+|||.|++..+... ....+...+... |..+.
T Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~~~~~~~~l~~~-f~~v~ 166 (196)
T 2nyu_A 101 ILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS--------QSRRLQRRLTEE-FQNVR 166 (196)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG--------GGHHHHHHHHHH-EEEEE
T ss_pred EEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc--------cHHHHHHHHHHH-hcceE
Confidence 9997765531 22 4789999999999999999765431 225666666653 55444
No 151
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.29 E-value=4.5e-12 Score=110.35 Aligned_cols=85 Identities=16% Similarity=0.294 Sum_probs=67.8
Q ss_pred CCCEEEEEcCcccHHHHHhcc-----ceEEEeccC---------------------CCCcEEEccCCC-CC--CCCCCcc
Q 022592 141 PSLVIADFGCGDARLAKSVKN-----KVFSFDLVS---------------------NDPSVIACDMSN-TP--LNSSSVD 191 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~---------------------~~~~~~~~d~~~-lp--~~~~~fD 191 (294)
++.+|||||||+|.++..++. .|+|+|+|+ .++.++.+|+.. ++ +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 456899999999999998872 699999974 357889999986 66 7789999
Q ss_pred EEEEcccccCC---------CHHHHHHHHHHhcCcCcEEEEEe
Q 022592 192 VAVFCLSLMGI---------NFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 192 ~Vi~~~~l~~~---------~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.|++.+...|. ....++.++.++|+|||.|++..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99876554332 12479999999999999999863
No 152
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=5.1e-12 Score=111.30 Aligned_cols=82 Identities=21% Similarity=0.436 Sum_probs=70.3
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEcccccCCCHH
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFP 205 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~ 205 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.+..+|+..+|+++++||+|++..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh------
Confidence 56799999999999888775 3799999997 46789999999999988999999987663
Q ss_pred HHHHHHHHhcCcCcEEEEEeecC
Q 022592 206 NYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 206 ~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
.++.++.++|+|||.+++.....
T Consensus 159 ~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CCHHHHHHHEEEEEEEEEEEECT
T ss_pred hhHHHHHHhcCCCcEEEEEEcCH
Confidence 35899999999999999986543
No 153
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.28 E-value=1.9e-12 Score=111.38 Aligned_cols=85 Identities=12% Similarity=0.146 Sum_probs=69.7
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCCC-C--CCCCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSNT-P--LNSSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~l-p--~~~~~fD~Vi~~~ 197 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+..+ + +++++||.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 45699999999999998887 2599999997 3678999998774 3 6789999999986
Q ss_pred cccCCC---------HHHHHHHHHHhcCcCcEEEEEe
Q 022592 198 SLMGIN---------FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~---------~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+.. ...++.++.++|+|||.|++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 655431 1369999999999999999975
No 154
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.28 E-value=1.1e-11 Score=113.67 Aligned_cols=83 Identities=22% Similarity=0.265 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcc---
Q 022592 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCL--- 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~--- 197 (294)
.++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.++++++++||+|++..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 367799999999999988876 3799999996 367899999999998888999999876
Q ss_pred cccCC-CHHHHHHHHHHhcCcCcEEE
Q 022592 198 SLMGI-NFPNYLQEAQRVLKPSGWLL 222 (294)
Q Consensus 198 ~l~~~-~~~~~l~el~r~LkpgG~l~ 222 (294)
.+.+. +...++.++.++|+|||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 34443 56789999999999999998
No 155
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.27 E-value=2e-11 Score=108.72 Aligned_cols=84 Identities=15% Similarity=0.204 Sum_probs=66.9
Q ss_pred CCCEEEEEcCcccH----HHHHhc---------cceEEEeccCC------------------------------------
Q 022592 141 PSLVIADFGCGDAR----LAKSVK---------NKVFSFDLVSN------------------------------------ 171 (294)
Q Consensus 141 ~~~~VLDiGcG~G~----~~~~l~---------~~v~gvD~s~~------------------------------------ 171 (294)
+..+|||+|||+|. ++..++ ..|+|+|+|+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 444333 16999999861
Q ss_pred ----------CCcEEEccCCCCCCC-CCCccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEE
Q 022592 172 ----------DPSVIACDMSNTPLN-SSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 172 ----------~~~~~~~d~~~lp~~-~~~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~ 224 (294)
++.|...|+.+.|++ .+.||+|+|..+++|+++ ..++.++.++|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 245677888876665 578999999999998754 58999999999999999984
No 156
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.27 E-value=9.6e-12 Score=108.69 Aligned_cols=114 Identities=17% Similarity=0.270 Sum_probs=87.4
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~ 187 (294)
..++..+... ++.+|||+|||+|.++..++ ..|+++|+++ .++.+..+|+.+. +++
T Consensus 83 ~~i~~~~~~~-~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 160 (255)
T 3mb5_A 83 ALIVAYAGIS-PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEE 160 (255)
T ss_dssp HHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCC
T ss_pred HHHHHhhCCC-CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCC
Confidence 3455555443 67799999999999888775 3799999996 2378899998854 667
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCC--CeEEEEe
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLG--FAPVSKD 257 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 257 (294)
++||+|++. ..++..++.++.++|+|||.+++...... ....+...+++.| |..+...
T Consensus 161 ~~~D~v~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 161 ENVDHVILD----LPQPERVVEHAAKALKPGGFFVAYTPCSN--------QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp CSEEEEEEC----SSCGGGGHHHHHHHEEEEEEEEEEESSHH--------HHHHHHHHHHHTGGGBSCCEEE
T ss_pred CCcCEEEEC----CCCHHHHHHHHHHHcCCCCEEEEEECCHH--------HHHHHHHHHHHcCCCccccEEE
Confidence 889999973 24677899999999999999999753211 3467888899999 9776643
No 157
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=8e-12 Score=116.15 Aligned_cols=85 Identities=22% Similarity=0.244 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEccccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~ 200 (294)
.++.+|||||||+|.++..++ .+|+|+|+|. .++.++.+|+.+++++ ++||+|++..+.+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 367799999999999988876 2899999994 2378999999998877 8899999966555
Q ss_pred C----CCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 201 G----INFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 201 ~----~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+ ..+..++.++.++|+|||.|++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 4 257789999999999999998854
No 158
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.26 E-value=3e-11 Score=105.52 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=72.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-CCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-PLN 186 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p~~ 186 (294)
..++..+....++.+|||||||+|..+..++ ..|+++|+++ .++.++.+|+... +..
T Consensus 49 ~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~ 128 (242)
T 3r3h_A 49 AQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSL 128 (242)
T ss_dssp HHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344444433355799999999999888776 3799999998 2577888888653 211
Q ss_pred -----CCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 187 -----SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 187 -----~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
.++||+|++... ..+...+++++.++|+|||+|++.++.
T Consensus 129 ~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDAD--KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHCSSCEEEEEEESC--GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhccCCCCEeEEEEcCC--hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 478999998754 346678999999999999999997654
No 159
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.25 E-value=2e-11 Score=108.19 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=67.7
Q ss_pred CCCCEEEEEcCcccHHHHHhc--cceEEEeccCC----------------CCcEE--EccCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK--NKVFSFDLVSN----------------DPSVI--ACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~--~~v~gvD~s~~----------------~~~~~--~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||||||+|.++..++ ..|+|+|+++. ++.++ .+|+..++ +++||+|++..+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~- 149 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG- 149 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-
Confidence 367799999999999998887 48999999873 35677 78988876 678999999877
Q ss_pred cCC-CH----H---HHHHHHHHhcCcCc--EEEEEeec
Q 022592 200 MGI-NF----P---NYLQEAQRVLKPSG--WLLIAEVK 227 (294)
Q Consensus 200 ~~~-~~----~---~~l~el~r~LkpgG--~l~i~e~~ 227 (294)
++. ++ . .++.++.++|+||| .|++..+.
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 432 32 1 37899999999999 88886543
No 160
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.25 E-value=4.8e-12 Score=104.89 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=75.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCC----CC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNT----PL 185 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~l----p~ 185 (294)
+.++..+....++.+|||+|||+|.++..++ .+|+|+|+++ .++.++.+|+.+. +.
T Consensus 33 ~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 112 (187)
T 2fhp_A 33 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE 112 (187)
T ss_dssp HHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh
Confidence 3345555433356799999999999988665 3799999997 2477888988663 22
Q ss_pred CCCCccEEEEcccccCCCHHHHHHHH--HHhcCcCcEEEEEeecC
Q 022592 186 NSSSVDVAVFCLSLMGINFPNYLQEA--QRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~~~~~~l~el--~r~LkpgG~l~i~e~~~ 228 (294)
++++||+|++...++..+....+..+ .++|+|||.+++.....
T Consensus 113 ~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred cCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 36789999998886656777888888 89999999999875443
No 161
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.24 E-value=3.5e-12 Score=105.23 Aligned_cols=99 Identities=9% Similarity=0.041 Sum_probs=74.7
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCC-CCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSN-TPLNSS 188 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~-lp~~~~ 188 (294)
+.++..+....++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+ ++..++
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 99 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTG 99 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCS
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcC
Confidence 4456666533356799999999999988776 3799999997 246788888876 344456
Q ss_pred CccEEEEcccccCCCHHHHHHHHH--HhcCcCcEEEEEeecC
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQ--RVLKPSGWLLIAEVKS 228 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~--r~LkpgG~l~i~e~~~ 228 (294)
.||+|++...++......++..+. ++|+|||.+++.....
T Consensus 100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 799999987764445567777777 9999999999976443
No 162
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.24 E-value=1e-11 Score=112.13 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=90.3
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCCCCC--CCCCccEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNTPL--NSSSVDVAV 194 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~lp~--~~~~fD~Vi 194 (294)
.+.+|||||||+|.++..++ ..|+++|+++ .++.++.+|+...+. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 45799999999999998876 3799999985 256788888876543 468899999
Q ss_pred EcccccCC-CH----HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc------CCeE
Q 022592 195 FCLSLMGI-NF----PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS------NKMF 263 (294)
Q Consensus 195 ~~~~l~~~-~~----~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~------~~~f 263 (294)
+.....+. .. ..+++++.++|+|||+|++..-...+ .......+.+.++++||..+..... ...+
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~----~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL----DLELIEKMSRFIRETGFASVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT----CHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc----chHHHHHHHHHHHhCCCCcEEEEEeecccccCcce
Confidence 97665542 11 68999999999999999986432211 1124567888999999988764321 2445
Q ss_pred EEEEEEEC
Q 022592 264 IMFYFKKK 271 (294)
Q Consensus 264 ~~i~~~k~ 271 (294)
.++++.+.
T Consensus 251 ~f~~as~~ 258 (304)
T 3bwc_A 251 GTLVCSKK 258 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 56666654
No 163
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.24 E-value=4.3e-12 Score=107.57 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=73.1
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC-----------------CCCcEEEccCCCCCC--CCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-----------------NDPSVIACDMSNTPL--NSS 188 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-----------------~~~~~~~~d~~~lp~--~~~ 188 (294)
++..+....++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+.++.. +++
T Consensus 44 l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 123 (201)
T 2ift_A 44 LFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQ 123 (201)
T ss_dssp HHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSS
T ss_pred HHHHHHHhcCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccC
Confidence 34444332256799999999999988654 3799999996 156788888876432 367
Q ss_pred C-ccEEEEcccccCCCHHHHHHHH--HHhcCcCcEEEEEeecCC
Q 022592 189 S-VDVAVFCLSLMGINFPNYLQEA--QRVLKPSGWLLIAEVKSR 229 (294)
Q Consensus 189 ~-fD~Vi~~~~l~~~~~~~~l~el--~r~LkpgG~l~i~e~~~~ 229 (294)
+ ||+|++...++..+...++..+ .++|+|||.+++......
T Consensus 124 ~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 124 PHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 8 9999998886545677888888 678999999999765443
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.23 E-value=3e-11 Score=110.14 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=69.9
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEccccc-
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLM- 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~- 200 (294)
++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+.++++++++||+|++....+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 56799999999999988776 3799999995 247899999999988888999999875433
Q ss_pred --C-CCHHHHHHHHHHhcCcCcEEEE
Q 022592 201 --G-INFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 201 --~-~~~~~~l~el~r~LkpgG~l~i 223 (294)
+ ..+..++.++.++|+|||.++.
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 3 3678899999999999999973
No 165
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.23 E-value=2.2e-11 Score=108.50 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCcccHHHHHhc--cceEEEeccCC----------------CCcEE--EccCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK--NKVFSFDLVSN----------------DPSVI--ACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~--~~v~gvD~s~~----------------~~~~~--~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||||||+|.++..++ ..|+|+|+++. ++.++ .+|+..+| +++||+|++..+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~- 157 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG- 157 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-
Confidence 366799999999999998887 48999999872 45677 78888866 678999999877
Q ss_pred cCC-CH----H---HHHHHHHHhcCcCc--EEEEEeec
Q 022592 200 MGI-NF----P---NYLQEAQRVLKPSG--WLLIAEVK 227 (294)
Q Consensus 200 ~~~-~~----~---~~l~el~r~LkpgG--~l~i~e~~ 227 (294)
++. ++ . .++.++.++|+||| .|++..+.
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 432 22 1 37899999999999 98885543
No 166
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.23 E-value=3.2e-11 Score=110.92 Aligned_cols=91 Identities=21% Similarity=0.318 Sum_probs=73.9
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~ 192 (294)
++..+... ++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+.+++++ ++||+
T Consensus 42 i~~~l~~~-~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~ 119 (348)
T 2y1w_A 42 ILQNHTDF-KDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDI 119 (348)
T ss_dssp HHHTGGGT-TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEE
T ss_pred HHhccccC-CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeE
Confidence 44444333 66799999999999988876 3899999996 3578999999988775 67999
Q ss_pred EEEcccccCC---CHHHHHHHHHHhcCcCcEEEEE
Q 022592 193 AVFCLSLMGI---NFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 193 Vi~~~~l~~~---~~~~~l~el~r~LkpgG~l~i~ 224 (294)
|++...++|. +....+.++.++|+|||.+++.
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999887763 4568888999999999999853
No 167
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.23 E-value=3.2e-13 Score=117.20 Aligned_cols=132 Identities=16% Similarity=0.185 Sum_probs=94.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCCCCc
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~f 190 (294)
..++..+....++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+..++ ++++|
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~ 145 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKA 145 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCC
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCC
Confidence 3344444443367799999999999999887 4899999997 25789999998876 56789
Q ss_pred cEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC-----CCCCCHHHHHHHHHHCCCeEEEEeccCCeE
Q 022592 191 DVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN-----TGGADPNKFSKAVCDLGFAPVSKDFSNKMF 263 (294)
Q Consensus 191 D~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~-----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f 263 (294)
|+|++..++++. +....+.++.++|+|||.+++.... ..... ....+.+.+..++...|.-.+.....+...
T Consensus 146 D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~-~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~~~~ 223 (241)
T 3gdh_A 146 DVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSK-KITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNNKL 223 (241)
T ss_dssp SEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHHHH-HHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEETTEE
T ss_pred CEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHHHH-hhCCceEEECCCCCCHHHHHHHhccCCCEEEEehhhcCcc
Confidence 999999999985 4445778899999999996663211 11000 112467888888888886665544444444
No 168
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.23 E-value=2.9e-11 Score=107.18 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=88.0
Q ss_pred HHHHHHhhccCCCCEEEEEcCccc---HHHHH---hc--cceEEEeccC---------------CCCcEEEccCCCCC--
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDA---RLAKS---VK--NKVFSFDLVS---------------NDPSVIACDMSNTP-- 184 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G---~~~~~---l~--~~v~gvD~s~---------------~~~~~~~~d~~~lp-- 184 (294)
.+++.++........|||||||++ ..... +. .+|+++|.|+ .++.|+.+|+.+++
T Consensus 67 ~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~ 146 (277)
T 3giw_A 67 NRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASI 146 (277)
T ss_dssp HHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHH
T ss_pred HHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhh
Confidence 446666664323358999999973 23222 22 4899999997 14789999998752
Q ss_pred ----CCCCCcc-----EEEEcccccCC-C---HHHHHHHHHHhcCcCcEEEEEeecCCCCC---------------CCCC
Q 022592 185 ----LNSSSVD-----VAVFCLSLMGI-N---FPNYLQEAQRVLKPSGWLLIAEVKSRFDP---------------NTGG 236 (294)
Q Consensus 185 ----~~~~~fD-----~Vi~~~~l~~~-~---~~~~l~el~r~LkpgG~l~i~e~~~~~~~---------------~~~~ 236 (294)
...+.|| .|+++.+|||. + +..+++++.+.|+|||+|+++++...+.+ ....
T Consensus 147 l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~ 226 (277)
T 3giw_A 147 LDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRL 226 (277)
T ss_dssp HTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCC
T ss_pred hcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCcc
Confidence 1134566 58899999995 3 57899999999999999999976654321 1123
Q ss_pred CCHHHHHHHHHHCCCeEEE
Q 022592 237 ADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~ 255 (294)
.+.+++..+|. ||++++
T Consensus 227 rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 227 RTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp CCHHHHHHTTT--TSEECT
T ss_pred CCHHHHHHHhC--CCcccC
Confidence 58899999885 998765
No 169
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.23 E-value=2.2e-11 Score=104.73 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=72.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC-------------CCcEEEccCCCCCCCCCCccEE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVDVA 193 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~-------------~~~~~~~d~~~lp~~~~~fD~V 193 (294)
..++..+... ++.+|||||||+|.++..++ ..|+|+|+++. ++.++.+|+......+++||+|
T Consensus 60 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 60 IFMLDELDLH-KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp HHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred HHHHHhcCCC-CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEE
Confidence 4455555433 67799999999999988886 48999999871 6788999987733346789999
Q ss_pred EEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 194 i~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
++..+++|.. .++.++|+|||.+++...
T Consensus 139 ~~~~~~~~~~-----~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 139 VVWATAPTLL-----CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EESSBBSSCC-----HHHHHTEEEEEEEEEEEC
T ss_pred EECCcHHHHH-----HHHHHHcCCCcEEEEEEc
Confidence 9999998864 368999999999999753
No 170
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=7.9e-12 Score=106.00 Aligned_cols=88 Identities=6% Similarity=0.016 Sum_probs=70.5
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCC-CCCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSN-TPLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~-lp~~~~~fD~Vi~~~~l~ 200 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+.. ++...++||+|++...++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 45799999999999988654 3799999997 257888999876 555667899999988755
Q ss_pred CCCHHHHHHHHHH--hcCcCcEEEEEeecC
Q 022592 201 GINFPNYLQEAQR--VLKPSGWLLIAEVKS 228 (294)
Q Consensus 201 ~~~~~~~l~el~r--~LkpgG~l~i~e~~~ 228 (294)
......++..+.+ +|+|||.+++.....
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4577788888866 599999999876443
No 171
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.22 E-value=5.1e-11 Score=110.47 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=67.6
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEc---cc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFC---LS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~---~~ 198 (294)
++.+|||||||+|.++..++ .+|+|||.|+ +.+.++.+|++++.++ ++||+||+- ..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 56799999999999987765 3799999986 3578999999998876 679999983 33
Q ss_pred ccCC-CHHHHHHHHHHhcCcCcEEEE
Q 022592 199 LMGI-NFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 199 l~~~-~~~~~l~el~r~LkpgG~l~i 223 (294)
|.+. ....++....++|+|||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 4443 678899999999999998875
No 172
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.21 E-value=2.6e-11 Score=109.94 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=73.7
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cc---eEEEeccC---------------CCCcEEEccCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NK---VFSFDLVS---------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~---v~gvD~s~---------------~~~~~~~~d~~~lp~~~ 187 (294)
...++..+... ++.+|||||||+|.++..++ .. |+|+|+|+ .++.+..+|+...+.++
T Consensus 64 ~~~l~~~l~~~-~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 64 MALFMEWVGLD-KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCC-CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccC
Confidence 34456655544 67899999999999988876 24 99999997 24788899998765556
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
++||+|++..+++|.. .++.++|+|||.+++..
T Consensus 143 ~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEEB
T ss_pred CCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEEE
Confidence 8899999999999865 57889999999999964
No 173
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.20 E-value=3.7e-11 Score=103.95 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=68.7
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCC-C-CCCCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT-P-LNSSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~l-p-~~~~~fD~Vi~~~ 197 (294)
++.+|||||||+|..+..++ ..|+++|+++ +++.++.+|+... + ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 56799999999999988886 3799999987 2688999999764 3 3368899999764
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
. ..+...++.++.++|+|||+|++.++
T Consensus 151 ~--~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 151 A--KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp T--SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred c--HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 3 24678899999999999999988653
No 174
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.19 E-value=1.5e-10 Score=103.22 Aligned_cols=115 Identities=16% Similarity=0.200 Sum_probs=80.4
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEec-cCC-------------------------CCcEEEccCCCCC--C---
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDL-VSN-------------------------DPSVIACDMSNTP--L--- 185 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~-s~~-------------------------~~~~~~~d~~~lp--~--- 185 (294)
++.+|||||||+|.++..++ ..|+|+|+ ++. ++.+...|..+.. +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 56799999999999988776 27999999 551 2444444433211 1
Q ss_pred -CCCCccEEEEcccccCC-CHHHHHHHHHHhcC---c--CcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCC-CeEEEEe
Q 022592 186 -NSSSVDVAVFCLSLMGI-NFPNYLQEAQRVLK---P--SGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLG-FAPVSKD 257 (294)
Q Consensus 186 -~~~~fD~Vi~~~~l~~~-~~~~~l~el~r~Lk---p--gG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~ 257 (294)
++++||+|+++.+++|. +...++..+.++|+ | ||.++++-.... +.. ......+...+++.| |.+..+.
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~--~~~-~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR--PHL-AERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEEEE
T ss_pred ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee--ccc-chhHHHHHHHHHhcCCEEEEEec
Confidence 35789999999999884 78899999999999 9 998877521111 000 012356777899999 9988764
Q ss_pred c
Q 022592 258 F 258 (294)
Q Consensus 258 ~ 258 (294)
.
T Consensus 236 ~ 236 (281)
T 3bzb_A 236 S 236 (281)
T ss_dssp C
T ss_pred c
Confidence 3
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.19 E-value=6.1e-11 Score=107.59 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=85.6
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCCCCCCc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~f 190 (294)
++..+....++.+|||+|||+|..+..++ ..|+|+|+++ .++.++.+|+..++..+++|
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~f 188 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEF 188 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCE
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccC
Confidence 33333333477899999999999888776 3699999997 26788889998876556789
Q ss_pred cEEEEccc------ccC-CC----------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 022592 191 DVAVFCLS------LMG-IN----------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVC 247 (294)
Q Consensus 191 D~Vi~~~~------l~~-~~----------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~ 247 (294)
|+|++... +.+ .+ ...++.++.++|+|||.|+++...-... -+...+..+++
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~-----Ene~~v~~~l~ 263 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE-----ENEFVIQWALD 263 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG-----GTHHHHHHHHH
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH-----HhHHHHHHHHh
Confidence 99998432 221 11 1488999999999999999976432111 13456778889
Q ss_pred HCCCeEEEE
Q 022592 248 DLGFAPVSK 256 (294)
Q Consensus 248 ~~Gf~~~~~ 256 (294)
+.||+++..
T Consensus 264 ~~~~~~~~~ 272 (315)
T 1ixk_A 264 NFDVELLPL 272 (315)
T ss_dssp HSSEEEECC
T ss_pred cCCCEEecC
Confidence 999877653
No 176
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.18 E-value=6.8e-11 Score=101.99 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=68.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCC-CCC--CCCccEEEEc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT-PLN--SSSVDVAVFC 196 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~l-p~~--~~~fD~Vi~~ 196 (294)
++.+|||||||+|.++..++ ..|+++|+++ .++.++.+|+... +.. +++||+|++.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 66799999999999888776 3799999986 2477888888763 432 5789999987
Q ss_pred ccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 197 LSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 197 ~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
.... +...++..+.++|+|||.+++.++
T Consensus 134 ~~~~--~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 134 AAKG--QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGGS--CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCHH--HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 7643 778999999999999999999754
No 177
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.18 E-value=1.7e-10 Score=106.12 Aligned_cols=119 Identities=19% Similarity=0.214 Sum_probs=88.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~ 198 (294)
.++..|||+|||+|.++..++ ..++|+|+++ .++.+.++|+.+++.+...||+|+++..
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 366799999999999887665 3799999997 2688999999998877788999999776
Q ss_pred ccCC--C-------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec---cCCeEEEE
Q 022592 199 LMGI--N-------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF---SNKMFIMF 266 (294)
Q Consensus 199 l~~~--~-------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~---~~~~f~~i 266 (294)
+... + ...++.++.++|+|||.+++... +...+..+++ .||+...... ......++
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-----------~~~~~~~~~~-~g~~~~~~~~l~~g~l~~~i~ 349 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-----------RPALLKRALP-PGFALRHARVVEQGGVYPRVF 349 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-----------CHHHHHHHCC-TTEEEEEEEECCBTTBCCEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-----------CHHHHHHHhh-cCcEEEEEEEEEeCCEEEEEE
Confidence 5431 1 36789999999999999999753 2344555556 8998876332 22233455
Q ss_pred EEEE
Q 022592 267 YFKK 270 (294)
Q Consensus 267 ~~~k 270 (294)
+++|
T Consensus 350 vl~r 353 (354)
T 3tma_A 350 VLEK 353 (354)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5554
No 178
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.18 E-value=6.8e-11 Score=101.33 Aligned_cols=116 Identities=11% Similarity=0.114 Sum_probs=80.6
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhcc------ceEEEeccC----------------CCCcEEEccCCC-CCCCC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVKN------KVFSFDLVS----------------NDPSVIACDMSN-TPLNS 187 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~------~v~gvD~s~----------------~~~~~~~~d~~~-lp~~~ 187 (294)
.++..+....++.+|||||||+|..+..++. +|+++|+++ +++.++.+|+.. ++...
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~ 127 (221)
T 3u81_A 48 QIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLK 127 (221)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTT
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHH
Confidence 3444443333567999999999999887762 799999997 247889998754 33222
Q ss_pred -----CCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC-CCeEEE
Q 022592 188 -----SSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL-GFAPVS 255 (294)
Q Consensus 188 -----~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 255 (294)
++||+|++....++. +...++..+ ++|+|||.|++.++... ....+.+.+.+. +|....
T Consensus 128 ~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~--------~~~~~~~~l~~~~~~~~~~ 193 (221)
T 3u81_A 128 KKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVP--------GTPDFLAYVRGSSSFECTH 193 (221)
T ss_dssp TTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCC--------CCHHHHHHHHHCTTEEEEE
T ss_pred HhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCc--------chHHHHHHHhhCCCceEEE
Confidence 689999998877664 455677777 99999999998654421 125666666655 455444
No 179
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.18 E-value=4e-11 Score=106.42 Aligned_cols=113 Identities=19% Similarity=0.257 Sum_probs=85.7
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~ 187 (294)
..++..+... ++.+|||+|||+|.++..++ ..|+++|+++ .++.+..+|+... +++
T Consensus 102 ~~i~~~~~~~-~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 179 (277)
T 1o54_A 102 SFIAMMLDVK-EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDE 179 (277)
T ss_dssp HHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSC
T ss_pred HHHHHHhCCC-CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccC
Confidence 3455555433 67799999999999887765 3799999987 2467888888775 566
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
++||+|++.. .++..++.++.++|+|||.+++..... .....+...|++.||..+..
T Consensus 180 ~~~D~V~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 180 KDVDALFLDV----PDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp CSEEEEEECC----SCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEE
T ss_pred CccCEEEECC----cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEE
Confidence 7899999842 466789999999999999999976321 02356778888999987763
No 180
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=6.1e-11 Score=100.80 Aligned_cols=90 Identities=20% Similarity=0.176 Sum_probs=70.3
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~ 188 (294)
..++..+.. .++.+|||||||+|.++..++ ..|+++|+++ .++.+..+|+......++
T Consensus 67 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 67 GMMCELLDL-KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHHhhCC-CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 345555543 367799999999999887775 3799999986 357788888854332367
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+||+|++..+++|.. .++.++|+|||.+++..
T Consensus 146 ~fD~v~~~~~~~~~~-----~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP-----EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEEE
T ss_pred CeeEEEECCchHHHH-----HHHHHHcCCCcEEEEEE
Confidence 899999999999865 48899999999999975
No 181
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.16 E-value=1.6e-10 Score=103.51 Aligned_cols=109 Identities=11% Similarity=0.081 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCc------ccH-HHHHh-c--cceEEEeccC--CCCcE-EEccCCCCCCCCCCccEEEEcccccC-----
Q 022592 140 SPSLVIADFGCG------DAR-LAKSV-K--NKVFSFDLVS--NDPSV-IACDMSNTPLNSSSVDVAVFCLSLMG----- 201 (294)
Q Consensus 140 ~~~~~VLDiGcG------~G~-~~~~l-~--~~v~gvD~s~--~~~~~-~~~d~~~lp~~~~~fD~Vi~~~~l~~----- 201 (294)
.++.+||||||| +|. .+..+ . ..|+|+|+|+ .++.+ +.+|+..++++ ++||+|++....++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~ 140 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVT 140 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CC
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCcccccccc
Confidence 467799999994 465 12222 1 4799999998 46789 99999988764 67999999754321
Q ss_pred ------C-CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 202 ------I-NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 202 ------~-~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
. ....+++++.++|||||.|++..+... ...++..++++.||..+...
T Consensus 141 ~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~--------~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 141 KENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS--------WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp SCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--------CCHHHHHHHTTEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC--------CHHHHHHHHHHcCCcEEEEE
Confidence 0 134789999999999999999765432 22688899999999877653
No 182
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.16 E-value=2e-10 Score=104.83 Aligned_cols=91 Identities=20% Similarity=0.263 Sum_probs=67.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC--------------------------CCCcEEE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------------------NDPSVIA 177 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~--------------------------~~~~~~~ 177 (294)
..++..+... ++.+|||+|||+|.++..++ ..|+|+|+++ .++.+..
T Consensus 95 ~~~l~~l~~~-~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 95 NMILSMMDIN-PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHTCC-TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHhcCCC-CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 4456665443 67899999999999887765 3799999986 2578889
Q ss_pred ccCCCC--CCCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 178 CDMSNT--PLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 178 ~d~~~l--p~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|+... ++++++||+|++... ++..++.++.++|+|||.|++..
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~----~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML----NPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp SCTTCCC-------EEEEEECSS----STTTTHHHHGGGEEEEEEEEEEE
T ss_pred CChHHcccccCCCCeeEEEECCC----CHHHHHHHHHHhcCCCcEEEEEe
Confidence 999876 566778999998533 34458999999999999999864
No 183
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.16 E-value=4.2e-10 Score=96.20 Aligned_cols=97 Identities=12% Similarity=0.123 Sum_probs=71.9
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-C-
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P- 184 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p- 184 (294)
...++..+....++.+|||||||+|..+..++ .+|+++|+++ +++.++.+|+... +
T Consensus 46 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 125 (223)
T 3duw_A 46 QGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQ 125 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHH
Confidence 34455555433366799999999999988776 2799999987 2478888888653 1
Q ss_pred CC---CCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 185 LN---SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 185 ~~---~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
++ .++||+|++... ......++.++.++|+|||.+++.++.
T Consensus 126 ~~~~~~~~fD~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 126 IENEKYEPFDFIFIDAD--KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHTTCCCCSEEEECSC--GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHhcCCCCcCEEEEcCC--cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11 257999998655 235678999999999999988886543
No 184
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.16 E-value=2e-11 Score=106.70 Aligned_cols=115 Identities=9% Similarity=0.018 Sum_probs=74.8
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC----------------CCCcEEEccCCCC---CCC---CCCccEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS----------------NDPSVIACDMSNT---PLN---SSSVDVA 193 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~----------------~~~~~~~~d~~~l---p~~---~~~fD~V 193 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 45699999999999887665 3799999997 2378999997652 444 2689999
Q ss_pred EEcccccCCC----------------HHHHHHHHHHhcCcCcEEEEEeec-----------CCCCCC-CCCCCHHHHHHH
Q 022592 194 VFCLSLMGIN----------------FPNYLQEAQRVLKPSGWLLIAEVK-----------SRFDPN-TGGADPNKFSKA 245 (294)
Q Consensus 194 i~~~~l~~~~----------------~~~~l~el~r~LkpgG~l~i~e~~-----------~~~~~~-~~~~~~~~~~~~ 245 (294)
+++..+++.. ...++.+++++|+|||.+.+++.. ...... ......+.+.++
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 224 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEE 224 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHH
Confidence 9986655421 124566778888888877664200 000000 111245789999
Q ss_pred HHHCCCeEEE
Q 022592 246 VCDLGFAPVS 255 (294)
Q Consensus 246 l~~~Gf~~~~ 255 (294)
++++||..+.
T Consensus 225 l~~~Gf~~v~ 234 (254)
T 2h00_A 225 LRIQGVPKVT 234 (254)
T ss_dssp HHHTTCSEEE
T ss_pred HHHcCCCceE
Confidence 9999998766
No 185
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=5.1e-11 Score=110.67 Aligned_cols=93 Identities=17% Similarity=0.207 Sum_probs=72.8
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC------------------CCcEEEccCCCCCCCC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN------------------DPSVIACDMSNTPLNS 187 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~------------------~~~~~~~d~~~lp~~~ 187 (294)
.+++.+... ++.+|||+|||+|.++..++ ..|+|+|+|+. ++.++.+|+.. ++++
T Consensus 213 ~ll~~l~~~-~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~ 290 (375)
T 4dcm_A 213 FFMQHLPEN-LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEP 290 (375)
T ss_dssp HHHHTCCCS-CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCT
T ss_pred HHHHhCccc-CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCC
Confidence 456666544 45799999999999988886 37999999971 35678999887 5667
Q ss_pred CCccEEEEcccccCC------CHHHHHHHHHHhcCcCcEEEEEe
Q 022592 188 SSVDVAVFCLSLMGI------NFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~------~~~~~l~el~r~LkpgG~l~i~e 225 (294)
++||+|+++..+++. ....++.++.++|+|||.++++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 899999999998852 12478999999999999999964
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.15 E-value=3.9e-11 Score=106.21 Aligned_cols=113 Identities=19% Similarity=0.265 Sum_probs=84.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC------------------CCCcEEEccCCCCCC
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS------------------NDPSVIACDMSNTPL 185 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~------------------~~~~~~~~d~~~lp~ 185 (294)
..++..+... ++.+|||+|||+|.++..++ ..|+++|+++ .++.++.+|+...++
T Consensus 89 ~~i~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 89 AQIVHEGDIF-PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHHcCCC-CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 3455555433 67799999999999887765 3799999975 246788899988888
Q ss_pred CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHH-CCCeEEE
Q 022592 186 NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCD-LGFAPVS 255 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~-~Gf~~~~ 255 (294)
++++||+|++.. .++..++.++.++|+|||.+++...... ....+...+.+ .||....
T Consensus 168 ~~~~~D~v~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~--------~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 168 PDGSVDRAVLDM----LAPWEVLDAVSRLLVAGGVLMVYVATVT--------QLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp CTTCEEEEEEES----SCGGGGHHHHHHHEEEEEEEEEEESSHH--------HHHHHHHHHHHHSSBCCCE
T ss_pred CCCceeEEEECC----cCHHHHHHHHHHhCCCCCEEEEEeCCHH--------HHHHHHHHHHhcCCcCCcE
Confidence 788999999832 3667899999999999999999763211 12455556666 7886543
No 187
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=1.5e-10 Score=101.22 Aligned_cols=97 Identities=12% Similarity=0.102 Sum_probs=73.3
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCC-CCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN-TPL 185 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~-lp~ 185 (294)
...++..+....++.+|||||||+|..+..++ ..|+++|+++ +++.++.+|+.. ++.
T Consensus 51 ~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 51 QGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred HHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh
Confidence 34455555433356799999999999988776 2799999987 267889998865 332
Q ss_pred C--CCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 186 N--SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 186 ~--~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
. .++||+|++... ..+...++.++.++|+|||+|++.++.
T Consensus 131 ~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD--KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CCSCCCCSEEEECSC--GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred cCCCCCeEEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 2 348999998653 235678999999999999999987654
No 188
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.14 E-value=2.9e-11 Score=98.61 Aligned_cols=96 Identities=11% Similarity=0.149 Sum_probs=71.7
Q ss_pred HHHHhhccC-CCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------------CCcEEEccCCCC-C-CC--CCC
Q 022592 132 IVKWLKDHS-PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNT-P-LN--SSS 189 (294)
Q Consensus 132 ~~~~l~~~~-~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~l-p-~~--~~~ 189 (294)
++..+.... ++.+|||+|||+|.++..++ ..|+|+|+++. ++.++.+|+.+. + ++ .++
T Consensus 31 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 110 (171)
T 1ws6_A 31 LFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGER 110 (171)
T ss_dssp HHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCC
T ss_pred HHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCc
Confidence 444444322 56799999999999988886 35999999971 678888888662 2 11 247
Q ss_pred ccEEEEcccccCCCHHHHHHHHH--HhcCcCcEEEEEeecC
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQ--RVLKPSGWLLIAEVKS 228 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~--r~LkpgG~l~i~e~~~ 228 (294)
||+|++...++ .+...++..+. ++|+|||.+++.....
T Consensus 111 ~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 111 FTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred eEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 99999998776 55667777777 9999999999876443
No 189
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.14 E-value=7.8e-11 Score=111.08 Aligned_cols=96 Identities=9% Similarity=0.051 Sum_probs=71.7
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhcc-----ceEEEeccC------------------------CCCcEEEcc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVS------------------------NDPSVIACD 179 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~------------------------~~~~~~~~d 179 (294)
+..+++.+... ++.+|||||||+|.++..++. .|+|+|+++ .++.++.+|
T Consensus 231 v~~ml~~l~l~-~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 231 LSDVYQQCQLK-KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHTTCC-TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHhcCCC-CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 34455555433 677999999999999888762 699999986 245566665
Q ss_pred CCCC--CC--CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 180 MSNT--PL--NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 180 ~~~l--p~--~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.... ++ ..++||+|+++.++...++..++.++.++|+|||.|++.+
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 4321 22 2468999998877754577889999999999999999975
No 190
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.13 E-value=2e-10 Score=103.84 Aligned_cols=84 Identities=14% Similarity=0.129 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCcccHHHHHhccc--eEEEec----cC-------------CCCcEEEc-cCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVKNK--VFSFDL----VS-------------NDPSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~~--v~gvD~----s~-------------~~~~~~~~-d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||||||+|.++..++.. |+|+|+ ++ +++.++.+ |+..+| .++||+|+|..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~~ 158 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIGE 158 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECCcc
Confidence 35679999999999999998854 999999 33 12456666 777665 5689999997765
Q ss_pred c--C--CCHH---HHHHHHHHhcCcCcEEEEEe
Q 022592 200 M--G--INFP---NYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 200 ~--~--~~~~---~~l~el~r~LkpgG~l~i~e 225 (294)
. + .+.. .+|.++.++|+|||.|++..
T Consensus 159 ~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 159 SSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1 1222 57888999999999888854
No 191
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.13 E-value=1.2e-10 Score=98.74 Aligned_cols=95 Identities=13% Similarity=0.082 Sum_probs=71.6
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-CC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-PL 185 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p~ 185 (294)
...++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... +.
T Consensus 44 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 123 (210)
T 3c3p_A 44 TGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG 123 (210)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT
T ss_pred HHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc
Confidence 34455444333355799999999999988875 2799999997 2467888888653 44
Q ss_pred CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 186 NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 186 ~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
.++ ||+|++... ..+...++.++.++|+|||.+++.+.
T Consensus 124 ~~~-fD~v~~~~~--~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 124 QRD-IDILFMDCD--VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp CCS-EEEEEEETT--TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CCC-CCEEEEcCC--hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 456 999998732 34778999999999999999998653
No 192
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=3.8e-11 Score=102.78 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=71.6
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-C-C
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-L 185 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p-~ 185 (294)
..++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHh
Confidence 3445544443356799999999999988876 3799999997 2478888888542 2 1
Q ss_pred CC----CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 186 NS----SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 186 ~~----~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
.. ++||+|++... ..+...++.++.++|+|||.|++.++.
T Consensus 133 ~~~~~~~~fD~v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDAD--KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HTTTCTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred hhccCCCCccEEEECCC--HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11 78999996543 235778999999999999999997644
No 193
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.12 E-value=1.8e-10 Score=102.26 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCcccHHHHHhc---c--ceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK---N--KVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~--~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||+|||+|.++..++ . .|+|+|+++ .++.++.+|+...+. .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 467799999999999988876 2 799999997 356799999988744 6789999987664
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
+...++.++.++|+|||.++++....
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 66789999999999999999987654
No 194
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.10 E-value=6.3e-11 Score=108.62 Aligned_cols=95 Identities=18% Similarity=0.236 Sum_probs=75.1
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC--------------CCcEEEccCCCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~--------------~~~~~~~d~~~lp~~~~~ 189 (294)
...+++.+... ++.+|||||||+|.++..++ ..|+|+|+|+. ...++.+|+...+ +++
T Consensus 185 ~~~ll~~l~~~-~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLTPH-TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGR 261 (343)
T ss_dssp HHHHHHHSCTT-CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSC
T ss_pred HHHHHHhcCcC-CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCC
Confidence 45566666443 45689999999999988876 27999999971 3567788887644 678
Q ss_pred ccEEEEcccccCC------CHHHHHHHHHHhcCcCcEEEEEee
Q 022592 190 VDVAVFCLSLMGI------NFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 190 fD~Vi~~~~l~~~------~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
||+|+++..+++. +...++.++.++|+|||.++++..
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 9999999998861 457899999999999999999753
No 195
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.10 E-value=1.8e-10 Score=99.15 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=71.8
Q ss_pred HHHHHHHhhccCCCC---EEEEEcCcccHHHHHhc------cceEEEeccC-----------------CCCcEEEccCCC
Q 022592 129 VNIIVKWLKDHSPSL---VIADFGCGDARLAKSVK------NKVFSFDLVS-----------------NDPSVIACDMSN 182 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~---~VLDiGcG~G~~~~~l~------~~v~gvD~s~-----------------~~~~~~~~d~~~ 182 (294)
...++..+....+.. +|||||||+|..+..++ .+|+++|+++ .++.++.+|+.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 344555554443334 89999999999888775 3799999997 147788888765
Q ss_pred C-C-CCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 183 T-P-LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 183 l-p-~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
. + +++++||+|++... ..+...++.++.++|+|||+|++.++
T Consensus 121 ~l~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVS--PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HGGGSCTTCEEEEEECCC--TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHhcCCCcCeEEEcCc--HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 3 2 33688999998643 24677899999999999999999654
No 196
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.10 E-value=1.8e-10 Score=100.47 Aligned_cols=84 Identities=20% Similarity=0.369 Sum_probs=66.0
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-----------------------CCCcEEEccCCC-CC--CCCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-----------------------NDPSVIACDMSN-TP--LNSSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-----------------------~~~~~~~~d~~~-lp--~~~~~ 189 (294)
++.+|||||||+|.++..++ ..|+|+|+|+ .++.++.+|+.. ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 55689999999999998886 2699999985 256789999986 66 67789
Q ss_pred ccEEEEcccccCCC---------HHHHHHHHHHhcCcCcEEEEE
Q 022592 190 VDVAVFCLSLMGIN---------FPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 190 fD~Vi~~~~l~~~~---------~~~~l~el~r~LkpgG~l~i~ 224 (294)
+|.|++...-.+.. ...++.++.++|+|||.|++.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 99998654322210 158999999999999999995
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.09 E-value=5.2e-10 Score=103.74 Aligned_cols=110 Identities=15% Similarity=0.219 Sum_probs=84.7
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---c--ceEEEeccC----------------CCCcEEEccCCCCCCCCCC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---N--KVFSFDLVS----------------NDPSVIACDMSNTPLNSSS 189 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~--~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~ 189 (294)
.++... ..++.+|||+|||+|.++..++ . .|+|+|+++ .++.+.++|+..+++++++
T Consensus 209 ~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~ 286 (373)
T 3tm4_A 209 AMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDS 286 (373)
T ss_dssp HHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSC
T ss_pred HHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCC
Confidence 344444 3467799999999999988876 2 899999997 2678999999999988889
Q ss_pred ccEEEEcccccCC-----C----HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 190 VDVAVFCLSLMGI-----N----FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 190 fD~Vi~~~~l~~~-----~----~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
||+|+++..+... . ...++.++.++| ||.++++. .+.+.+.+.+.+.||++..
T Consensus 287 fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~-----------~~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 287 VDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT-----------TEKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE-----------SCHHHHHHHHHHTTEEEEE
T ss_pred cCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE-----------CCHHHHHHHHHHcCCEEEE
Confidence 9999998765531 1 257888999988 44444442 1568888999999999877
No 198
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.09 E-value=3.8e-10 Score=97.85 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCcccHHHHHhc--cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEcccccCC-
Q 022592 140 SPSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGI- 202 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~--~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~- 202 (294)
.+..+|||||||.|.++..+. ..++|+|+++ .+..+.++|....+++. +||+|++.-++|+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE 182 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLE 182 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhh
Confidence 356799999999999998765 4899999998 34567889998888654 89999999888874
Q ss_pred --CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC--CCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEE
Q 022592 203 --NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN--TGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMF 266 (294)
Q Consensus 203 --~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i 266 (294)
.....+ .+...|+++|.++-.+..+-.+.. ........|...+...++.+....+.+..++++
T Consensus 183 ~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nEl~~~i 249 (253)
T 3frh_A 183 REQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTELIYLI 249 (253)
T ss_dssp HHSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEETTEEEEEE
T ss_pred hhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCceEEEEE
Confidence 333444 788899999888887633322211 111233556666655666666688888888877
No 199
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.09 E-value=6.7e-10 Score=105.52 Aligned_cols=119 Identities=16% Similarity=0.248 Sum_probs=85.0
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCC--CCCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTP--LNSS 188 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp--~~~~ 188 (294)
++..+....++.+|||+|||+|..+..++ ..|+|+|+++ .++.++.+|+..++ ++++
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccC
Confidence 33333333467899999999999888775 3799999997 26778889998876 5557
Q ss_pred CccEEEEc------ccccC-CCH----------------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHH
Q 022592 189 SVDVAVFC------LSLMG-INF----------------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKA 245 (294)
Q Consensus 189 ~fD~Vi~~------~~l~~-~~~----------------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~ 245 (294)
+||+|++. .++.+ .+. ..++.++.++|+|||.|++++..-... -+.+.+..+
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~-----ene~~v~~~ 404 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE-----ENEKNIRWF 404 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-----GTHHHHHHH
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh-----hHHHHHHHH
Confidence 89999962 22222 221 578999999999999999987542211 134567778
Q ss_pred HHHC-CCeEEE
Q 022592 246 VCDL-GFAPVS 255 (294)
Q Consensus 246 l~~~-Gf~~~~ 255 (294)
++.. ||+.+.
T Consensus 405 l~~~~~~~~~~ 415 (450)
T 2yxl_A 405 LNVHPEFKLVP 415 (450)
T ss_dssp HHHCSSCEECC
T ss_pred HHhCCCCEEee
Confidence 8887 787654
No 200
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.08 E-value=2.5e-10 Score=98.10 Aligned_cols=90 Identities=13% Similarity=0.217 Sum_probs=70.8
Q ss_pred HHHHHHhh-ccCCCCEEEEEcCcccHHHHHhcc-----------ceEEEeccC--------------------CCCcEEE
Q 022592 130 NIIVKWLK-DHSPSLVIADFGCGDARLAKSVKN-----------KVFSFDLVS--------------------NDPSVIA 177 (294)
Q Consensus 130 ~~~~~~l~-~~~~~~~VLDiGcG~G~~~~~l~~-----------~v~gvD~s~--------------------~~~~~~~ 177 (294)
..+++.+. ...++.+|||||||+|.++..++. .|+++|+++ .++.+..
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 44566664 234677999999999998877652 799999986 2577888
Q ss_pred ccCCCCCCCC-CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 178 CDMSNTPLNS-SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 178 ~d~~~lp~~~-~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|+.. ++++ ++||+|++..++++.. .++.++|+|||++++..
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGRLIVPV 194 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEEEE
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCEEEEEE
Confidence 89876 4444 7899999999988754 68899999999999974
No 201
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.08 E-value=2.2e-10 Score=99.10 Aligned_cols=90 Identities=21% Similarity=0.291 Sum_probs=69.6
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCC-
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSS- 188 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~- 188 (294)
...+++.+... ++.+|||||||+|.++..++ ..|+++|+++ .++.+..+|+ ..++++.
T Consensus 80 ~~~~~~~l~~~-~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~ 157 (235)
T 1jg1_A 80 VAIMLEIANLK-PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKA 157 (235)
T ss_dssp HHHHHHHHTCC-TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGC
T ss_pred HHHHHHhcCCC-CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCC
Confidence 34455555433 66799999999999988776 4899999987 2577888887 3444443
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.||+|++..++++.. .++.++|+|||.+++..
T Consensus 158 ~fD~Ii~~~~~~~~~-----~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIP-----EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CEEEEEECSBBSSCC-----HHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCcHHHHH-----HHHHHhcCCCcEEEEEE
Confidence 599999999988754 37889999999999975
No 202
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.08 E-value=1.5e-10 Score=101.08 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=65.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccC-----------CC------------------------------
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS-----------ND------------------------------ 172 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~-----------~~------------------------------ 172 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ ..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 45689999999999887664 2689999997 12
Q ss_pred ---Cc-------------EEEccCCCCCC-----CCCCccEEEEcccccCC-C---------HHHHHHHHHHhcCcCcEE
Q 022592 173 ---PS-------------VIACDMSNTPL-----NSSSVDVAVFCLSLMGI-N---------FPNYLQEAQRVLKPSGWL 221 (294)
Q Consensus 173 ---~~-------------~~~~d~~~lp~-----~~~~fD~Vi~~~~l~~~-~---------~~~~l~el~r~LkpgG~l 221 (294)
+. +..+|+..... ...+||+|+++..+.+. + ...++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 45 88899877431 34589999998776542 2 348999999999999999
Q ss_pred EEEe
Q 022592 222 LIAE 225 (294)
Q Consensus 222 ~i~e 225 (294)
+++.
T Consensus 211 ~~~~ 214 (250)
T 1o9g_A 211 AVTD 214 (250)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9954
No 203
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.08 E-value=2e-10 Score=98.52 Aligned_cols=91 Identities=19% Similarity=0.183 Sum_probs=71.4
Q ss_pred HHHHHhh-ccCCCCEEEEEcCcccHHHHHhc---c-------ceEEEeccC--------------------CCCcEEEcc
Q 022592 131 IIVKWLK-DHSPSLVIADFGCGDARLAKSVK---N-------KVFSFDLVS--------------------NDPSVIACD 179 (294)
Q Consensus 131 ~~~~~l~-~~~~~~~VLDiGcG~G~~~~~l~---~-------~v~gvD~s~--------------------~~~~~~~~d 179 (294)
.+++.+. ...++.+|||||||+|.++..++ . .|+++|+++ .++.++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 3555553 23467799999999999887765 3 799999986 157788899
Q ss_pred CCCCC----CCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 180 MSNTP----LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 180 ~~~lp----~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+...+ ...++||+|++..++++. +.++.++|+|||.+++...
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEEEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEEEc
Confidence 88755 556789999999888764 4788999999999999743
No 204
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.07 E-value=2.5e-10 Score=97.79 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=71.0
Q ss_pred HHHHHhh-ccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC--------------------CCCcEEEccCCCC
Q 022592 131 IIVKWLK-DHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS--------------------NDPSVIACDMSNT 183 (294)
Q Consensus 131 ~~~~~l~-~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~--------------------~~~~~~~~d~~~l 183 (294)
.++..+. ...++.+|||||||+|.++..++ ..|+++|+++ .++.++.+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 4555554 22367799999999999888765 3799999986 1577888998776
Q ss_pred CCCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 184 PLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 184 p~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+...++||+|++...+++. +.++.++|+|||.+++..
T Consensus 146 ~~~~~~fD~i~~~~~~~~~-----~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV-----PQALIDQLKPGGRLILPV 182 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC-----CHHHHHTEEEEEEEEEEE
T ss_pred cccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEEE
Confidence 6567789999999888654 368899999999999975
No 205
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.07 E-value=3.7e-10 Score=103.21 Aligned_cols=117 Identities=14% Similarity=0.053 Sum_probs=81.8
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------C--CCcEEEccCCCCCCC----C
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------N--DPSVIACDMSNTPLN----S 187 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~--~~~~~~~d~~~lp~~----~ 187 (294)
+...+....++.+|||+|||+|.++..++ ..|+++|+|+ . ++.++++|+.++... .
T Consensus 144 l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 144 LKNAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRG 223 (332)
T ss_dssp HHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcC
Confidence 44444322255799999999999998886 3899999997 1 378888888764321 4
Q ss_pred CCccEEEEcccccC-----------CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHH----HCCCe
Q 022592 188 SSVDVAVFCLSLMG-----------INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVC----DLGFA 252 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~-----------~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~----~~Gf~ 252 (294)
++||+|++...... .+...++.++.++|+|||.|++....... .+.+.+.+++. ++|+.
T Consensus 224 ~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~------~~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 224 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIR------ASFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTT------SCHHHHHHHHHHHTTTSCSE
T ss_pred CCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCC------CCHHHHHHHHHHHHHHcCCe
Confidence 68999999543211 14568999999999999998776543321 24566666555 78887
Q ss_pred EE
Q 022592 253 PV 254 (294)
Q Consensus 253 ~~ 254 (294)
+.
T Consensus 298 v~ 299 (332)
T 2igt_A 298 VA 299 (332)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 206
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.06 E-value=7.8e-10 Score=98.83 Aligned_cols=120 Identities=18% Similarity=0.204 Sum_probs=80.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCc-
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSV- 190 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~f- 190 (294)
++..+... ++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+... ++ ++|
T Consensus 115 ~l~~~~~~-~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~ 191 (284)
T 1nv8_A 115 ALELIRKY-GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFA 191 (284)
T ss_dssp HHHHHHHH-TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTT
T ss_pred HHHHhccc-CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccC
Confidence 44444323 45699999999999988876 3799999997 1378999999772 32 478
Q ss_pred --cEEEEccccc-----------CC---------CHHHHHHHHH-HhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 022592 191 --DVAVFCLSLM-----------GI---------NFPNYLQEAQ-RVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVC 247 (294)
Q Consensus 191 --D~Vi~~~~l~-----------~~---------~~~~~l~el~-r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~ 247 (294)
|+|+++.... |. +...+++++. +.|+|||++++ ++... ..+.+..++.
T Consensus 192 ~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~-e~~~~--------q~~~v~~~~~ 262 (284)
T 1nv8_A 192 SIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM-EIGED--------QVEELKKIVS 262 (284)
T ss_dssp TCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE-ECCTT--------CHHHHTTTST
T ss_pred CCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE-EECch--------HHHHHHHHHH
Confidence 9999973221 21 2237899999 99999999998 33221 2356666666
Q ss_pred HCCCeEEEEeccCCeEEEE
Q 022592 248 DLGFAPVSKDFSNKMFIMF 266 (294)
Q Consensus 248 ~~Gf~~~~~~~~~~~f~~i 266 (294)
+. .+..+.....-.++
T Consensus 263 ~~---~~~~D~~g~~R~~~ 278 (284)
T 1nv8_A 263 DT---VFLKDSAGKYRFLL 278 (284)
T ss_dssp TC---EEEECTTSSEEEEE
T ss_pred hC---CeecccCCCceEEE
Confidence 65 34455544443333
No 207
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.06 E-value=1.4e-09 Score=97.71 Aligned_cols=126 Identities=12% Similarity=0.126 Sum_probs=83.4
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------------------CCCcEEEccCCCC-CCCCCCccEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSNT-PLNSSSVDVAV 194 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------------~~~~~~~~d~~~l-p~~~~~fD~Vi 194 (294)
...+|||||||+|.++..++ .+|+++|+++ +++.++.+|+... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 45699999999999998886 3699999987 2678899998763 44567899999
Q ss_pred EcccccCC-----CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec----c--CCeE
Q 022592 195 FCLSLMGI-----NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF----S--NKMF 263 (294)
Q Consensus 195 ~~~~l~~~-----~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~----~--~~~f 263 (294)
+....... ....+++.+.++|+|||+|++..-...... -....+...+++. |..+.... . ...+
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~----~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~ 237 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ----EEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC----HHHHHHHHHHHHH-CSEEEEEEEECTTSSSSEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch----HHHHHHHHHHHHH-CCCeEEEEEEecccCCCce
Confidence 96554321 126899999999999999998643222211 1234455556655 65554211 1 3456
Q ss_pred EEEEEEEC
Q 022592 264 IMFYFKKK 271 (294)
Q Consensus 264 ~~i~~~k~ 271 (294)
.++.+.+.
T Consensus 238 ~f~~as~~ 245 (294)
T 3adn_A 238 TFAWATDN 245 (294)
T ss_dssp EEEEEESC
T ss_pred EEEEEeCC
Confidence 66777664
No 208
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.04 E-value=3.8e-10 Score=98.83 Aligned_cols=124 Identities=13% Similarity=0.139 Sum_probs=92.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
+..+|||||||+|.++..++ ..|+++|+++ ....+.+.|....+ +.+.||+|++.-++++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 45699999999999998885 3899999998 24567788887655 3577999999999999
Q ss_pred CCHH---HHHHHHHHhcCcCcEEEEEeecCCCCCCCC--CCCHHHHHHHHHHCCCeEEEEeccCCeEEEE
Q 022592 202 INFP---NYLQEAQRVLKPSGWLLIAEVKSRFDPNTG--GADPNKFSKAVCDLGFAPVSKDFSNKMFIMF 266 (294)
Q Consensus 202 ~~~~---~~l~el~r~LkpgG~l~i~e~~~~~~~~~~--~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i 266 (294)
.+.+ ..+ .+...|+|+|.++-.+..+-.+...+ ......|...+...|+.+....+.+..++++
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~nEl~y~i 279 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGNELIYVI 279 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecCeeEEEe
Confidence 5332 445 89999999999998775332222111 1234577788888999988899999888876
No 209
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.04 E-value=1.6e-09 Score=91.10 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=73.6
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC----------CCCcEEEccCCCCCCCCCCccEEEEcccccCCC---
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGIN--- 203 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~--- 203 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+..++ ++||+|+++..+++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCch
Confidence 56799999999999988876 2699999997 26889999998865 6899999999998852
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
...++.++.+++ |+ ++++.-. -+...+.+++...| .+..
T Consensus 128 ~~~~l~~~~~~~--g~-~~~~~~~---------~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 128 DRAFIDKAFETS--MW-IYSIGNA---------KARDFLRREFSARG-DVFR 166 (200)
T ss_dssp CHHHHHHHHHHE--EE-EEEEEEG---------GGHHHHHHHHHHHE-EEEE
T ss_pred hHHHHHHHHHhc--Cc-EEEEEcC---------chHHHHHHHHHHCC-CEEE
Confidence 357899999998 44 4443211 13466788888888 5544
No 210
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.03 E-value=3.1e-10 Score=99.31 Aligned_cols=95 Identities=13% Similarity=0.096 Sum_probs=71.8
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-C-C
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-L 185 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p-~ 185 (294)
..++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +
T Consensus 68 ~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 68 GQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEM 147 (247)
T ss_dssp HHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHH
Confidence 3445544443356799999999999888775 3799999997 2467888887653 3 2
Q ss_pred -----CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 186 -----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 186 -----~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
++++||+|++... ..+...++.++.++|+|||.|++.++
T Consensus 148 ~~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDAD--KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHSGGGTTCBSEEEECSC--STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HhccCCCCCEEEEEEcCc--hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 1578999998654 24678999999999999999998653
No 211
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.03 E-value=8.5e-10 Score=102.27 Aligned_cols=108 Identities=11% Similarity=0.095 Sum_probs=82.2
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC---------------CCCcEEEccCCC-CCC-CCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS---------------NDPSVIACDMSN-TPL-NSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~---------------~~~~~~~~d~~~-lp~-~~~~fD~Vi~~~~ 198 (294)
++.+|||+| |+|.++..++ ..|+|+|+++ .++.++.+|+.. +|. .+++||+|+++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 467999999 9999988775 3799999986 268899999988 664 3568999999876
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCH---HHHHHHHH-HCCCeEEE
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADP---NKFSKAVC-DLGFAPVS 255 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~---~~~~~~l~-~~Gf~~~~ 255 (294)
++......++.++.++|+|||.+++.++... ..+. ..+..++. ..||.+..
T Consensus 251 ~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~------~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 251 ETLEAIRAFVGRGIATLKGPRCAGYFGITRR------ESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp SSHHHHHHHHHHHHHTBCSTTCEEEEEECTT------TCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred CchHHHHHHHHHHHHHcccCCeEEEEEEecC------cCCHHHHHHHHHHHHHhcCcchhh
Confidence 5543457899999999999996544444321 1244 56777787 89998765
No 212
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.03 E-value=9.1e-10 Score=95.32 Aligned_cols=111 Identities=14% Similarity=0.215 Sum_probs=80.6
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCCCCcc
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVD 191 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD 191 (294)
.++..+... ++.+|||+|||+|.++..++ ..|+++|+++ .++.+..+|+....+++++||
T Consensus 82 ~~~~~~~~~-~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 82 YIALKLNLN-KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HHHHhcCCC-CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 344444433 67799999999999888776 4899999986 256788888887543567899
Q ss_pred EEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 192 VAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 192 ~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
+|++.. .++..++.++.++|+|||.+++...... ...++...+.+. |..+.
T Consensus 161 ~v~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 161 AAFVDV----REPWHYLEKVHKSLMEGAPVGFLLPTAN--------QVIKLLESIENY-FGNLE 211 (248)
T ss_dssp EEEECS----SCGGGGHHHHHHHBCTTCEEEEEESSHH--------HHHHHHHHSTTT-EEEEE
T ss_pred EEEECC----cCHHHHHHHHHHHcCCCCEEEEEeCCHH--------HHHHHHHHHHhh-CCcce
Confidence 999742 3677899999999999999999763210 124555566655 65444
No 213
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.03 E-value=1.6e-10 Score=110.73 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=68.3
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||||||+|.++..++ .+|+|+|+|+ .++.++.+|+.+++++ ++||+|++...++|
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 236 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHh
Confidence 56799999999999988776 3799999986 3578999999988765 57999999877666
Q ss_pred C---CHHHHHHHHHHhcCcCcEEEE
Q 022592 202 I---NFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 202 ~---~~~~~l~el~r~LkpgG~l~i 223 (294)
. +....+.++.++|+|||.+++
T Consensus 237 ~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 237 LFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred cCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 3 345677788999999999985
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.02 E-value=6.8e-10 Score=98.56 Aligned_cols=111 Identities=11% Similarity=0.124 Sum_probs=80.1
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCC----CCCCccEEE
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPL----NSSSVDVAV 194 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~----~~~~fD~Vi 194 (294)
.++.+|||+|||+|..+..++ ..|+|+|+++ .++.++.+|+..++. ..++||+|+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 367899999999999887775 3799999997 267788888877654 257899999
Q ss_pred EcccccC-------------------CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC-CCeEE
Q 022592 195 FCLSLMG-------------------INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL-GFAPV 254 (294)
Q Consensus 195 ~~~~l~~-------------------~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~ 254 (294)
+...... .....++.++.++|+|||.|+++...-... -+.+.+..++++. +|+++
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~-----ene~~v~~~l~~~~~~~~~ 236 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE-----ENEEVIKYILQKRNDVELI 236 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT-----SSHHHHHHHHHHCSSEEEE
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH-----HhHHHHHHHHHhCCCcEEe
Confidence 8633221 234688999999999999999976432111 1345666777654 56655
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 237 ~ 237 (274)
T 3ajd_A 237 I 237 (274)
T ss_dssp C
T ss_pred c
Confidence 4
No 215
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.00 E-value=5.1e-11 Score=116.47 Aligned_cols=87 Identities=15% Similarity=0.230 Sum_probs=69.9
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccCC---------------CCcEEEccCCCC--CCCCCCccEEEEccccc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN---------------DPSVIACDMSNT--PLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~---------------~~~~~~~d~~~l--p~~~~~fD~Vi~~~~l~ 200 (294)
.+.+|||||||.|.++..++ ..|+|+|+|+. ++.|.+++++++ ++.+++||+|+|..+|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 45699999999999999998 48999999971 467889998886 46678999999999999
Q ss_pred CC-CHH--HHHHHHHHhcCcCcEEEEEeec
Q 022592 201 GI-NFP--NYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 201 ~~-~~~--~~l~el~r~LkpgG~l~i~e~~ 227 (294)
|. ++. ..+..+.+.|+++|..++..+.
T Consensus 146 hv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 146 HIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 95 443 3345677788898887776543
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.99 E-value=3.3e-10 Score=98.04 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=70.9
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCC----C
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN----T 183 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~----l 183 (294)
..++..+....++.+|||||||+|..+..++ ..|+++|+++ .++.++.+|+.+ +
T Consensus 61 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l 140 (232)
T 3cbg_A 61 AQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQL 140 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344444333355699999999999988776 2799999997 246788888643 3
Q ss_pred CCCC--CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 184 PLNS--SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 184 p~~~--~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
+..+ ++||+|++... ..+...++.++.++|+|||.|++.++.
T Consensus 141 ~~~~~~~~fD~V~~d~~--~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 141 TQGKPLPEFDLIFIDAD--KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HTSSSCCCEEEEEECSC--GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HhcCCCCCcCEEEECCC--HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3333 78999998754 236678999999999999999997643
No 217
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.99 E-value=1.1e-09 Score=93.84 Aligned_cols=95 Identities=19% Similarity=0.199 Sum_probs=71.2
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-C-CC
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-LN 186 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p-~~ 186 (294)
.++..+....++.+|||||||+|..+..++ .+|+++|+++ .++.++.+|+... + +.
T Consensus 59 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 138 (229)
T 2avd_A 59 QLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELL 138 (229)
T ss_dssp HHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH
Confidence 344444443466799999999999988776 2799999997 2567888887543 1 21
Q ss_pred C----CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeec
Q 022592 187 S----SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 187 ~----~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
. ++||+|++... ..+...++.++.++|+|||.+++.++.
T Consensus 139 ~~~~~~~~D~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 139 AAGEAGTFDVAVVDAD--KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HTTCTTCEEEEEECSC--STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred hcCCCCCccEEEECCC--HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 1 68999998654 346778999999999999999997643
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.98 E-value=4.3e-09 Score=96.37 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=89.9
Q ss_pred CCCEEEEEcCcccHHHHHhc----------cceEEEeccC--------------CCCcEEEccCCCCCCCCCCccEEEEc
Q 022592 141 PSLVIADFGCGDARLAKSVK----------NKVFSFDLVS--------------NDPSVIACDMSNTPLNSSSVDVAVFC 196 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----------~~v~gvD~s~--------------~~~~~~~~d~~~lp~~~~~fD~Vi~~ 196 (294)
++.+|||+|||+|.++..++ ..++|+|+++ .++.+..+|.... ...+.||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 45689999999999887664 3589999997 2467888887663 345789999999
Q ss_pred ccccCC-C-----------------H-HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe
Q 022592 197 LSLMGI-N-----------------F-PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 197 ~~l~~~-~-----------------~-~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
..+.+. . . ..++..+.+.|+|||+++++...+.+... ....+.+.|.+.|+....+.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~----~~~~ir~~l~~~~~~~~ii~ 284 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS----DFAKVDKFIKKNGHIEGIIK 284 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGST----THHHHHHHHHHHEEEEEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCc----hHHHHHHHHHhCCeEEEeee
Confidence 776432 1 1 26899999999999999998766544332 35788888888887442222
Q ss_pred cc-------CCeEEEEEEEECC
Q 022592 258 FS-------NKMFIMFYFKKKE 272 (294)
Q Consensus 258 ~~-------~~~f~~i~~~k~~ 272 (294)
.. .....+++++|..
T Consensus 285 lp~~~F~~~~~~~~i~vl~k~~ 306 (344)
T 2f8l_A 285 LPETLFKSEQARKSILILEKAD 306 (344)
T ss_dssp CCGGGSCC-CCCEEEEEEEECC
T ss_pred CChhhccCCCCceEEEEEECCC
Confidence 21 2234566677654
No 219
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=3.3e-09 Score=99.28 Aligned_cols=139 Identities=13% Similarity=0.133 Sum_probs=93.6
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccCC------CCcEEEccCCCCCCCCCCccEEE
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVSN------DPSVIACDMSNTPLNSSSVDVAV 194 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~~------~~~~~~~d~~~lp~~~~~fD~Vi 194 (294)
...+.+++.+... ++.+|||+|||+|.++..++ ..++|+|+++. ++.++.+|+...+. .+.||+|+
T Consensus 26 ~l~~~~~~~~~~~-~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~-~~~fD~Ii 103 (421)
T 2ih2_A 26 EVVDFMVSLAEAP-RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP-GEAFDLIL 103 (421)
T ss_dssp HHHHHHHHHCCCC-TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCC-SSCEEEEE
T ss_pred HHHHHHHHhhccC-CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCc-cCCCCEEE
Confidence 3345566665432 45699999999999988776 37999999984 45688899887653 46899999
Q ss_pred EcccccC----------CC--------------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHH
Q 022592 195 FCLSLMG----------IN--------------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSK 244 (294)
Q Consensus 195 ~~~~l~~----------~~--------------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~ 244 (294)
++..+.. .+ ...++..+.++|+|||.++++.....+... ....+.+
T Consensus 104 ~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~----~~~~lr~ 179 (421)
T 2ih2_A 104 GNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE----DFALLRE 179 (421)
T ss_dssp ECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG----GGHHHHH
T ss_pred ECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc----cHHHHHH
Confidence 9644421 10 126688999999999999998655433221 3367888
Q ss_pred HHHHCCCe-EEEEe----ccCCeEEEEEEEEC
Q 022592 245 AVCDLGFA-PVSKD----FSNKMFIMFYFKKK 271 (294)
Q Consensus 245 ~l~~~Gf~-~~~~~----~~~~~f~~i~~~k~ 271 (294)
.+.+.|+. ++... .......+++++|.
T Consensus 180 ~l~~~~~~~i~~l~~~F~~~~~~~~il~~~k~ 211 (421)
T 2ih2_A 180 FLAREGKTSVYYLGEVFPQKKVSAVVIRFQKS 211 (421)
T ss_dssp HHHHHSEEEEEEEESCSTTCCCCEEEEEEESS
T ss_pred HHHhcCCeEEEECCCCCCCCCccEEEEEEEeC
Confidence 88888872 22221 12233456666664
No 220
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.97 E-value=5.6e-09 Score=92.93 Aligned_cols=110 Identities=13% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCcccHHHHHhc----cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++.+|||+|||+|.++..++ .+|+++|+++ +++.++.+|+..++. .+.||.|++...
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p- 201 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-
Confidence 367899999999999988775 4899999998 356788999988764 578999997643
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.....++..+.++|+|||++.+.++...... .....+.+..++...|+.+..
T Consensus 202 --~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~--~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTTTHHHHHHHHHHTTCEEEE
T ss_pred --CcHHHHHHHHHHHcCCCCEEEEEeeeccccc--chhHHHHHHHHHHHcCCcEEE
Confidence 2334678888999999999988765432211 112457788889999998754
No 221
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.96 E-value=1.6e-09 Score=96.39 Aligned_cols=126 Identities=13% Similarity=0.072 Sum_probs=85.7
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 45699999999999998886 3799999985 256788888765 3444678999999
Q ss_pred cccccCC-----CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec------cCCeEE
Q 022592 196 CLSLMGI-----NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF------SNKMFI 264 (294)
Q Consensus 196 ~~~l~~~-----~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~------~~~~f~ 264 (294)
.....+. ....+++++.++|+|||.+++........ ......+.+.+++. |..+.... ....+.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~v~~~~~~vp~~~~g~w~ 229 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT----PELITNVQRDVKEI-FPITKLYTANIPTYPSGLWT 229 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC----HHHHHHHHHHHHTT-CSEEEEEEECCTTSGGGCEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc----HHHHHHHHHHHHHh-CCCeEEEEEecCcccCcceE
Confidence 6554321 13689999999999999998863221110 11234556667776 66555321 124567
Q ss_pred EEEEEEC
Q 022592 265 MFYFKKK 271 (294)
Q Consensus 265 ~i~~~k~ 271 (294)
++++.|.
T Consensus 230 ~~~ask~ 236 (275)
T 1iy9_A 230 FTIGSKK 236 (275)
T ss_dssp EEEEESS
T ss_pred EEEeeCC
Confidence 7777664
No 222
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=7.8e-10 Score=95.82 Aligned_cols=93 Identities=22% Similarity=0.265 Sum_probs=68.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCC-CC----
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSN-TP---- 184 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~-lp---- 184 (294)
++..+....++.+|||||||+|..+..++ ..|+++|+++ .++.++.+|+.. ++
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 130 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLID 130 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHh
Confidence 33333333356799999999999888775 3799999987 136788888754 22
Q ss_pred ----------CCC--CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 185 ----------LNS--SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 185 ----------~~~--~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+++ ++||+|++.... .+...++.++.++|+|||++++.++
T Consensus 131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 131 SKSAPSWASDFAFGPSSIDLFFLDADK--ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp CSSCCGGGTTTCCSTTCEEEEEECSCG--GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred hcccccccccccCCCCCcCEEEEeCCH--HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 222 789999987543 2566899999999999999999764
No 223
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.95 E-value=8e-09 Score=87.01 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=77.1
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC--------------CCcEEEccCCCCCCCCCCccEEEEcccccCC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN--------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMGI 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~--------------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~ 202 (294)
++.+|||+|||+|.++..++ ..|+|+|+++. ++.++.+|+..++ ++||+|+++..+++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 56799999999999988886 36999999971 5788999998865 479999999887763
Q ss_pred ---CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 203 ---NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 203 ---~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
....++.++.++| || +++..+... -+.+.+.+.+.+.||++...
T Consensus 126 ~~~~~~~~l~~~~~~l--~~-~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DV-VYSIHLAKP-------EVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp STTTTHHHHHHHHHHC--SE-EEEEEECCH-------HHHHHHHHHHHHTTEEEEEE
T ss_pred cCCchHHHHHHHHHhc--Cc-EEEEEeCCc-------CCHHHHHHHHHHCCCeEEEE
Confidence 3457889999998 55 444332111 12356778889999987653
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.94 E-value=2.2e-09 Score=96.47 Aligned_cols=126 Identities=12% Similarity=0.092 Sum_probs=83.0
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 44699999999999998886 3799999986 246778888755 3444678999998
Q ss_pred cccccCC------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec------cCCeE
Q 022592 196 CLSLMGI------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF------SNKMF 263 (294)
Q Consensus 196 ~~~l~~~------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~------~~~~f 263 (294)
.....+. ....+++++.++|+|||.+++........ ......+.+.+.+. |..+.... ....+
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~ 244 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYD----IGWFKLAYRRISKV-FPITRVYLGFMTTYPSGMW 244 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTT----HHHHHHHHHHHHHH-CSEEEEEEEECTTSTTSEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccC----HHHHHHHHHHHHHH-CCceEEEEeecCccCCCce
Confidence 6443211 23689999999999999999963221111 01224555666666 55544221 13567
Q ss_pred EEEEEEEC
Q 022592 264 IMFYFKKK 271 (294)
Q Consensus 264 ~~i~~~k~ 271 (294)
.++.+.|.
T Consensus 245 ~f~~as~~ 252 (296)
T 1inl_A 245 SYTFASKG 252 (296)
T ss_dssp EEEEEESS
T ss_pred EEEEecCC
Confidence 77777654
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.94 E-value=5.2e-09 Score=98.75 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=82.7
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC--------------CCcEEEccCCCCC--CCCCCc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIACDMSNTP--LNSSSV 190 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~--------------~~~~~~~d~~~lp--~~~~~f 190 (294)
+...+.. .++.+|||+|||+|..+..++ ..|+|+|+++. ++.++.+|+..++ +++++|
T Consensus 238 ~~~~l~~-~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 238 CMTWLAP-QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHHHHCC-CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCE
T ss_pred HHHHcCC-CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCC
Confidence 3344433 477899999999999888776 38999999983 4678888998876 556789
Q ss_pred cEEEEcc------cccC-CCH----------------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 022592 191 DVAVFCL------SLMG-INF----------------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVC 247 (294)
Q Consensus 191 D~Vi~~~------~l~~-~~~----------------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~ 247 (294)
|+|++.. ++.+ .+. ..++.++.++|+|||.|++++..-... -+...+..+++
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-----ene~~v~~~l~ 391 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-----ENSLQIKAFLQ 391 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG-----GTHHHHHHHHH
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh-----hHHHHHHHHHH
Confidence 9999632 2222 221 478999999999999999986432111 13456677777
Q ss_pred HC-CCeEE
Q 022592 248 DL-GFAPV 254 (294)
Q Consensus 248 ~~-Gf~~~ 254 (294)
+. +|+++
T Consensus 392 ~~~~~~~~ 399 (429)
T 1sqg_A 392 RTADAELC 399 (429)
T ss_dssp HCTTCEEC
T ss_pred hCCCCEEe
Confidence 76 57654
No 226
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.93 E-value=5.4e-09 Score=95.56 Aligned_cols=99 Identities=12% Similarity=0.138 Sum_probs=78.3
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
++.+|||+|||+|.++.. + ..|+|+|+|+ .++.++.+|+.... ++||+|++....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 677999999999999988 7 3899999997 35789999998765 789999986321
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC-CCeEEE
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL-GFAPVS 255 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~ 255 (294)
....++..+.++|+|||.+++.++... .+.+.+.+.++ ||++..
T Consensus 269 -~~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~l~~~~~~~i~~ 313 (336)
T 2yx1_A 269 -FAHKFIDKALDIVEEGGVIHYYTIGKD---------FDKAIKLFEKKCDCEVLE 313 (336)
T ss_dssp -TGGGGHHHHHHHEEEEEEEEEEEEESS---------SHHHHHHHHHHSEEEEEE
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEEeecC---------chHHHHHHHHhcCCcEEE
Confidence 123788999999999999999877654 25666677776 777654
No 227
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.92 E-value=5.4e-09 Score=95.02 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=82.8
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
.+.+|||||||+|.++..++ .+|+++|+++ ++++++.+|+.. ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 45699999999999999886 3799999986 246678888755 3333578999998
Q ss_pred cccccC-C--C--HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec------cCCeEE
Q 022592 196 CLSLMG-I--N--FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF------SNKMFI 264 (294)
Q Consensus 196 ~~~l~~-~--~--~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~------~~~~f~ 264 (294)
...... . . ...+++++.++|+|||++++........ ......+.+.+++. |..+.... ....+.
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~v~~~~~~vp~~~~g~w~ 270 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH----VGTIKNMIGYAKKL-FKKVEYANISIPTYPCGCIG 270 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHTT-CSEEEEEEEECTTSGGGEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHH-CCCeEEEEEEeccccCceEE
Confidence 653221 1 1 1789999999999999999853222111 01223455556665 55554221 123566
Q ss_pred EEEEEEC
Q 022592 265 MFYFKKK 271 (294)
Q Consensus 265 ~i~~~k~ 271 (294)
++.+.+.
T Consensus 271 f~~as~~ 277 (321)
T 2pt6_A 271 ILCCSKT 277 (321)
T ss_dssp EEEEESS
T ss_pred EEEeeCC
Confidence 6666654
No 228
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.92 E-value=2.7e-09 Score=96.69 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=85.9
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------------------CCCcEEEccCCC-CCCCCCCccEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSN-TPLNSSSVDVAV 194 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------------~~~~~~~~d~~~-lp~~~~~fD~Vi 194 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 45699999999999999886 2799999985 245678888765 344467899999
Q ss_pred EcccccC---CC-----HHHHHHHHHHhcCcCcEEEEEeecCC-CCCCCCCCCHHHHHHHHHHCCCeEEEEe-----ccC
Q 022592 195 FCLSLMG---IN-----FPNYLQEAQRVLKPSGWLLIAEVKSR-FDPNTGGADPNKFSKAVCDLGFAPVSKD-----FSN 260 (294)
Q Consensus 195 ~~~~l~~---~~-----~~~~l~el~r~LkpgG~l~i~e~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-----~~~ 260 (294)
+....++ .. ...+++++.++|+|||.+++...... .. .-....+.+.++.. |..+... ...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~----~~~~~~~~~~l~~~-F~~v~~~~~~vP~~~ 231 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTH----HRVHPVVHRTVREA-FRYVRSYKNHIPGFF 231 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC-------CHHHHHHHHHHTT-CSEEEEEEEEEGGGT
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccC----HHHHHHHHHHHHHH-CCceEEEEEecCCCC
Confidence 9876644 11 36899999999999999998632221 11 11335666777766 5544422 113
Q ss_pred CeEEEEEEEEC
Q 022592 261 KMFIMFYFKKK 271 (294)
Q Consensus 261 ~~f~~i~~~k~ 271 (294)
..+.++.+.|.
T Consensus 232 g~~~~~~as~~ 242 (314)
T 1uir_A 232 LNFGFLLASDA 242 (314)
T ss_dssp EEEEEEEEESS
T ss_pred CeEEEEEEECC
Confidence 35666666654
No 229
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=2.6e-09 Score=96.74 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred CEEEEEcCcccHHHHHhcc-----ceEEEeccC---------------CCCcEEEccCCCC--CCCCCCccEEEEccccc
Q 022592 143 LVIADFGCGDARLAKSVKN-----KVFSFDLVS---------------NDPSVIACDMSNT--PLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~---------------~~~~~~~~d~~~l--p~~~~~fD~Vi~~~~l~ 200 (294)
.+|||||||+|.++..++. ++++||+++ .++.++.+|+... .+++++||+|++.....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999988762 789999987 3578889998663 24567899999865443
Q ss_pred CC-----CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec-------cCCeEEEEEE
Q 022592 201 GI-----NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF-------SNKMFIMFYF 268 (294)
Q Consensus 201 ~~-----~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-------~~~~f~~i~~ 268 (294)
.. ....+++++.++|+|||+|++...... .......+...|.+. |..+.... ....+.++++
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~-----~~~~~~~~~~tL~~v-F~~v~~~~~~~~~~g~~~gN~Vl~A 244 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHS-----DLRGAKSELAGMMEV-FEHVAVIADPPMLKGRRYGNIILMG 244 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECT-----TCHHHHHHHHHHHHH-CSEEEEEECHHHHTTSSCEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecCCc-----chHHHHHHHHHHHHH-CCceEEEEecCCCCCCcCceEEEEE
Confidence 31 236899999999999999988653211 000123445555554 54444321 1334566666
Q ss_pred EEC
Q 022592 269 KKK 271 (294)
Q Consensus 269 ~k~ 271 (294)
.+.
T Consensus 245 s~~ 247 (317)
T 3gjy_A 245 SDT 247 (317)
T ss_dssp ESS
T ss_pred ECC
Confidence 554
No 230
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.87 E-value=2.4e-09 Score=101.66 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCC-CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTP-LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp-~~~~~fD~Vi~~~ 197 (294)
.++.+|||+|||+|..+..++ ..|+++|+++ .++.++.+|+..++ ..+++||+|++..
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 477899999999999887775 3799999997 35677778877654 2357899999754
Q ss_pred cccC-----CCH------------------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 198 SLMG-----INF------------------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 198 ~l~~-----~~~------------------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
.... .++ ..+|.++.++|||||.|+++...-... -+.+.+..++++.||+++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e-----Ene~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE-----ENEEIISWLVENYPVTIE 258 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG-----GTHHHHHHHHHHSSEEEE
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc-----cCHHHHHHHHHhCCCEEE
Confidence 3110 111 267999999999999999876432211 245677888898887776
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 259 ~ 259 (456)
T 3m4x_A 259 E 259 (456)
T ss_dssp C
T ss_pred e
Confidence 5
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.86 E-value=1.2e-08 Score=90.18 Aligned_cols=119 Identities=10% Similarity=-0.039 Sum_probs=80.6
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------------CCCcEEEccCCCCCCCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------------NDPSVIACDMSNTPLNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~ 198 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 34699999999999998776 4799999986 13567777776654 7899999863
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc----CCeEEEEEEEEC
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS----NKMFIMFYFKKK 271 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~----~~~f~~i~~~k~ 271 (294)
.++..+++.+.++|+|||.+++..-..... ......+.+.+... |..+..... ...+.++.+.|.
T Consensus 148 ---~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~~~~~~~~vP~~g~~~~~~as~~ 216 (262)
T 2cmg_A 148 ---EPDIHRIDGLKRMLKEDGVFISVAKHPLLE----HVSMQNALKNMGGV-FSVAMPFVAPLRILSNKGYIYASFK 216 (262)
T ss_dssp ---CCCHHHHHHHHTTEEEEEEEEEEEECTTTC----HHHHHHHHHHHHTT-CSEEEEECCTTCTTCCEEEEEEESS
T ss_pred ---CChHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHh-CCceEEEEEccCCCcccEEEEeeCC
Confidence 356679999999999999999853221111 00123344445544 766654432 345556566654
No 232
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.86 E-value=7.7e-09 Score=98.90 Aligned_cols=105 Identities=8% Similarity=0.063 Sum_probs=75.6
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCC-CCCCccEEEEcc-
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPL-NSSSVDVAVFCL- 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~-~~~~fD~Vi~~~- 197 (294)
++.+|||+|||+|..+..++ ..|+++|+++ .++.++.+|+..++. .+++||+|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 67799999999999887775 3799999997 357788899888653 457899999831
Q ss_pred -----cccC-CC----------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCC
Q 022592 198 -----SLMG-IN----------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 198 -----~l~~-~~----------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~G 250 (294)
++.+ .+ ...+|.++.++|||||.|+++...-... -+.+.+..++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~-----Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE-----ENEAVCLWLKETYP 266 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST-----TTHHHHHHHHHHST
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc-----cCHHHHHHHHHHCC
Confidence 2221 11 1368999999999999999976432211 13455666677665
No 233
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.86 E-value=1.2e-09 Score=94.80 Aligned_cols=95 Identities=13% Similarity=0.138 Sum_probs=70.9
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC----------------CCCcEEEccCCCC-C-C
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS----------------NDPSVIACDMSNT-P-L 185 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------------~~~~~~~~d~~~l-p-~ 185 (294)
..++..+....++.+|||||||+|..+..++ .+++++|+++ +++.++.+|+... + +
T Consensus 59 ~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 59 GQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3455554444456799999999999888775 3899999987 2467888887653 2 2
Q ss_pred -----CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 186 -----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 186 -----~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+.++||+|++... ..+...+++.+.++|+|||.+++.+.
T Consensus 139 ~~~~~~~~~fD~I~~d~~--~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDAD--KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHSTTCTTCEEEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HhccCCCCCcCEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2578999997643 23567899999999999999988653
No 234
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.85 E-value=2.1e-09 Score=98.23 Aligned_cols=84 Identities=15% Similarity=0.153 Sum_probs=65.8
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCCC-C-CCCCCccEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSNT-P-LNSSSVDVAV 194 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~l-p-~~~~~fD~Vi 194 (294)
...+|||||||+|.++..++ .+|+++|+++ .++.++.+|+... + +++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 45699999999999999887 3799999986 2567888887653 2 3457899999
Q ss_pred EcccccC--CC---HHHHHHHHHHhcCcCcEEEEE
Q 022592 195 FCLSLMG--IN---FPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 195 ~~~~l~~--~~---~~~~l~el~r~LkpgG~l~i~ 224 (294)
+.....+ .+ ...+++++.++|+|||+|++.
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 8654222 11 478999999999999999985
No 235
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.84 E-value=2.3e-09 Score=95.76 Aligned_cols=92 Identities=24% Similarity=0.240 Sum_probs=66.6
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC----------------CCCcEEEccCCCCCCCCC
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTPLNSS 188 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp~~~~ 188 (294)
.++.+++.+... ++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..++++
T Consensus 16 i~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~-- 92 (285)
T 1zq9_A 16 IINSIIDKAALR-PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP-- 92 (285)
T ss_dssp HHHHHHHHTCCC-TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--
T ss_pred HHHHHHHhcCCC-CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--
Confidence 345566666544 66799999999999999887 4899999986 1467899999888765
Q ss_pred CccEEEEcccccCCCH--HHHH--------------HHH--HHhcCcCcEEE
Q 022592 189 SVDVAVFCLSLMGINF--PNYL--------------QEA--QRVLKPSGWLL 222 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~--~~~l--------------~el--~r~LkpgG~l~ 222 (294)
+||+|+++..+++..+ ..++ +|+ .++|+|||.++
T Consensus 93 ~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7999999766554211 1222 233 36899999764
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.84 E-value=4e-09 Score=100.31 Aligned_cols=111 Identities=10% Similarity=0.091 Sum_probs=79.1
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccCC--------------CCcEEEccCCCCC-CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVSN--------------DPSVIACDMSNTP-LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~~--------------~~~~~~~d~~~lp-~~~~~fD~Vi~~~~ 198 (294)
.++.+|||+|||+|..+..++ ..|+|+|+++. .+.++.+|+..++ ...++||+|++...
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCC
Confidence 377899999999999888776 37999999971 2677788877665 24578999996322
Q ss_pred ------ccC-CC----------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC-CCeEE
Q 022592 199 ------LMG-IN----------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL-GFAPV 254 (294)
Q Consensus 199 ------l~~-~~----------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~ 254 (294)
+.. .+ ...++.++.++|||||.|+++...-... -+.+.+..++++. +|+++
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e-----Ene~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE-----ENEGVVAHFLKAHPEFRLE 254 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-----GTHHHHHHHHHHCTTEEEE
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh-----cCHHHHHHHHHHCCCcEEE
Confidence 211 11 1678999999999999999875432111 1446677777777 57665
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 255 ~ 255 (464)
T 3m6w_A 255 D 255 (464)
T ss_dssp C
T ss_pred e
Confidence 4
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.82 E-value=5.2e-09 Score=104.55 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=79.3
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------C--CCcEEEccCCC-CCCCCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N--DPSVIACDMSN-TPLNSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~--~~~~~~~d~~~-lp~~~~~fD~Vi~~~~ 198 (294)
++.+|||+|||+|.++..++ ..|+++|+|+ . ++.++++|+.. ++...++||+|++...
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 67799999999999998876 3699999997 1 47789999876 4444678999998654
Q ss_pred cc-----------C-CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 199 LM-----------G-INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 199 l~-----------~-~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.. + .+...++..+.++|+|||.|+++.-...+.. + ...+++.||+...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~-----~----~~~l~~~g~~~~~ 678 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM-----D----LDGLAKLGLKAQE 678 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC-----C----HHHHHHTTEEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc-----C----HHHHHHcCCceee
Confidence 32 1 1456789999999999999998754433332 2 4567788987544
No 238
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.79 E-value=2.6e-08 Score=94.10 Aligned_cols=111 Identities=15% Similarity=0.281 Sum_probs=77.6
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCC----CCCCCCC
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSN----TPLNSSS 189 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~----lp~~~~~ 189 (294)
+++.+... ++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+.. +++++++
T Consensus 278 ~~~~l~~~-~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 278 ALEWLDVQ-PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HHHHHTCC-TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTC
T ss_pred HHHhhcCC-CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCC
Confidence 44444332 56799999999999999887 4899999997 367899999977 3456678
Q ss_pred ccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
||+|++....... ..+++.+.+ ++|+++++++.-.. +...-...|.+.||.+..
T Consensus 357 fD~Vv~dPPr~g~--~~~~~~l~~-~~p~~ivyvsc~p~---------tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 357 FDKVLLDPARAGA--AGVMQQIIK-LEPIRIVYVSCNPA---------TLARDSEALLKAGYTIAR 410 (433)
T ss_dssp CSEEEECCCTTCC--HHHHHHHHH-HCCSEEEEEESCHH---------HHHHHHHHHHHTTCEEEE
T ss_pred CCEEEECCCCccH--HHHHHHHHh-cCCCeEEEEECChH---------HHHhhHHHHHHCCcEEEE
Confidence 9999986443322 355555554 78998888853110 112224567778999877
No 239
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.79 E-value=3.2e-09 Score=95.74 Aligned_cols=86 Identities=19% Similarity=0.100 Sum_probs=65.0
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 45699999999999999886 3799999985 246788888765 3445678999998
Q ss_pred cccccCC-----CHHHHHHHHHHhcCcCcEEEEEee
Q 022592 196 CLSLMGI-----NFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 196 ~~~l~~~-----~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
....+.. ....+++++.++|+|||+|++...
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 6554321 235789999999999999998643
No 240
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.78 E-value=4.1e-09 Score=94.07 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=75.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 45699999999999999886 3799999986 245678888765 2323578999998
Q ss_pred cccccCC---CH--HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 196 CLSLMGI---NF--PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 196 ~~~l~~~---~~--~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.....+. .. ..+++.+.++|+|||.+++......... .....+.+.+++. |..+.
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~----~~~~~~~~~l~~~-F~~v~ 217 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHV----GTIKNMIGYAKKL-FKKVE 217 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCH----HHHHHHHHHHHTT-CSEEE
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCH----HHHHHHHHHHHHH-CCceE
Confidence 6544331 11 6899999999999999998632222110 1123445556554 66554
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.78 E-value=3.9e-09 Score=98.07 Aligned_cols=115 Identities=13% Similarity=0.080 Sum_probs=79.0
Q ss_pred HhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCC----CCCCccE
Q 022592 135 WLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL----NSSSVDV 192 (294)
Q Consensus 135 ~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~----~~~~fD~ 192 (294)
.+... ++.+|||+|||+|.++..++ ..|+|+|+|+ .++.++.+|+..... ...+||+
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred HHHhc-CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 34444 56799999999999988886 4899999997 247888999876432 2568999
Q ss_pred EEEcccccCC----------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 193 AVFCLSLMGI----------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 193 Vi~~~~l~~~----------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
|++....... +...++.++.++|+|||.|+++......... .-...+...+.++|...
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEP---LFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH---HHHHHHHHHHHHTTCCE
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH---HHHHHHHHHHHHcCCeE
Confidence 9986543221 2457889999999999999998654332210 00123345566777543
No 242
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.77 E-value=4.1e-09 Score=98.12 Aligned_cols=105 Identities=10% Similarity=0.196 Sum_probs=75.1
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------C--CCcEEEccCCC-CCC---CCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N--DPSVIACDMSN-TPL---NSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~--~~~~~~~d~~~-lp~---~~~~fD~Vi~ 195 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+ . ++.++.+|+.. ++. ...+||+|++
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 56799999999999998876 3799999998 1 67789999866 221 2458999998
Q ss_pred ccccc-----C-C----CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHH----HHHHHCCCe
Q 022592 196 CLSLM-----G-I----NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFS----KAVCDLGFA 252 (294)
Q Consensus 196 ~~~l~-----~-~----~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~----~~l~~~Gf~ 252 (294)
..... + . +...++..+.++|+|||.|++....... +.+.+. ..+..+|..
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-------TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-------CHHHHHHHHHHHHHHcCCc
Confidence 65442 1 2 2446778889999999999997643322 344444 445556665
No 243
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.76 E-value=1.9e-08 Score=89.55 Aligned_cols=125 Identities=11% Similarity=0.003 Sum_probs=81.2
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC-------------------------CCCcEEEccCCC-CCCCCCCc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------------------NDPSVIACDMSN-TPLNSSSV 190 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-------------------------~~~~~~~~d~~~-lp~~~~~f 190 (294)
.+.+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++. +++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 45699999999999998886 3799999975 235667777654 222 5789
Q ss_pred cEEEEcccccCC-----CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec-----cC
Q 022592 191 DVAVFCLSLMGI-----NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF-----SN 260 (294)
Q Consensus 191 D~Vi~~~~l~~~-----~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-----~~ 260 (294)
|+|++....+.. ....+++++.++|+|||++++..-..... .-....+.+.+... |..+.... ..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-f~~v~~~~~~vP~~~ 228 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLF----TDELISAYKEMKKV-FDRVYYYSFPVIGYA 228 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTS----HHHHHHHHHHHHHH-CSEEEEEEECCTTSS
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHH-CCceEEEEEecCCCC
Confidence 999987654321 13688999999999999999863221111 01123444555554 65554221 13
Q ss_pred CeEEEEEEEEC
Q 022592 261 KMFIMFYFKKK 271 (294)
Q Consensus 261 ~~f~~i~~~k~ 271 (294)
..+.++++.|.
T Consensus 229 g~~~~~~as~~ 239 (281)
T 1mjf_A 229 SPWAFLVGVKG 239 (281)
T ss_dssp SSEEEEEEEES
T ss_pred ceEEEEEeeCC
Confidence 45666777664
No 244
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.76 E-value=3.9e-09 Score=95.69 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=62.0
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC-------------------CCCcEEEccCCC-CCCCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS-------------------NDPSVIACDMSN-TPLNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~-------------------~~~~~~~~d~~~-lp~~~~~fD~Vi~ 195 (294)
...+|||||||+|.++..++ .+|+++|+++ +++.++.+|+.. ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 44699999999999999886 3799999986 135677777755 3334678999998
Q ss_pred cccccCC-C--H--HHHHHHHHHhcCcCcEEEEEe
Q 022592 196 CLSLMGI-N--F--PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 196 ~~~l~~~-~--~--~~~l~el~r~LkpgG~l~i~e 225 (294)
....+.. . . ..+++++.++|+|||++++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 6543221 1 1 688999999999999999853
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.74 E-value=7.4e-09 Score=96.61 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC---------------C-CCcEEEccCCCCCC----CCCCccEEEEc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS---------------N-DPSVIACDMSNTPL----NSSSVDVAVFC 196 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~---------------~-~~~~~~~d~~~lp~----~~~~fD~Vi~~ 196 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ . ++.++.+|+..... ..++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 66799999999999998886 3799999997 1 57789999876431 25689999996
Q ss_pred ccccC----------CCHHHHHHHHHHhcCcCcEEEEEeecCC
Q 022592 197 LSLMG----------INFPNYLQEAQRVLKPSGWLLIAEVKSR 229 (294)
Q Consensus 197 ~~l~~----------~~~~~~l~el~r~LkpgG~l~i~e~~~~ 229 (294)
..... .+...++.++.++|+|||.|+++.....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 54332 1356788999999999999999875443
No 246
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.73 E-value=9.3e-08 Score=88.41 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=80.1
Q ss_pred CCEEEEEcCcccHHHHHhc--------------------cceEEEeccCCCC---------------------------c
Q 022592 142 SLVIADFGCGDARLAKSVK--------------------NKVFSFDLVSNDP---------------------------S 174 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~--------------------~~v~gvD~s~~~~---------------------------~ 174 (294)
..+|+|+|||+|..+..+. -.|+..|+..... .
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999877662 1466777665221 1
Q ss_pred EEE---ccCCCCCCCCCCccEEEEcccccCC---------------------------------------CHHHHHHHHH
Q 022592 175 VIA---CDMSNTPLNSSSVDVAVFCLSLMGI---------------------------------------NFPNYLQEAQ 212 (294)
Q Consensus 175 ~~~---~d~~~lp~~~~~fD~Vi~~~~l~~~---------------------------------------~~~~~l~el~ 212 (294)
|+. +.+..-.+|++++|+|+++.+|||. |+..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 2233345789999999999999993 1234688889
Q ss_pred HhcCcCcEEEEEeecCCC--------------------------------------CCCCCCCCHHHHHHHHH-HCCCeE
Q 022592 213 RVLKPSGWLLIAEVKSRF--------------------------------------DPNTGGADPNKFSKAVC-DLGFAP 253 (294)
Q Consensus 213 r~LkpgG~l~i~e~~~~~--------------------------------------~~~~~~~~~~~~~~~l~-~~Gf~~ 253 (294)
+.|+|||.+++.-..... .......+.+++..+++ ..||.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 999999999997432210 00111258899999998 589988
Q ss_pred EEEec
Q 022592 254 VSKDF 258 (294)
Q Consensus 254 ~~~~~ 258 (294)
..+..
T Consensus 293 ~~le~ 297 (374)
T 3b5i_A 293 DKLVV 297 (374)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77543
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.72 E-value=1.8e-09 Score=94.12 Aligned_cols=95 Identities=20% Similarity=0.162 Sum_probs=68.7
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC-------------CCcEEEccCCCCCCCC-CCc
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN-------------DPSVIACDMSNTPLNS-SSV 190 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~-------------~~~~~~~d~~~lp~~~-~~f 190 (294)
..+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+++. ++.++.+|+.+++++. ++|
T Consensus 17 ~~~~i~~~~~~~-~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 17 VLNQIIKQLNLK-ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp THHHHHHHCCCC-SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE
T ss_pred HHHHHHHhcCCC-CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc
Confidence 345566666543 56799999999999988886 48999999972 3567889999888764 678
Q ss_pred cEEEEcccccCC------------CHHHHH----HHHHHhcCcCcEEEEE
Q 022592 191 DVAVFCLSLMGI------------NFPNYL----QEAQRVLKPSGWLLIA 224 (294)
Q Consensus 191 D~Vi~~~~l~~~------------~~~~~l----~el~r~LkpgG~l~i~ 224 (294)
.|+++...+.. ....++ +.+.|+|+|||.+.+.
T Consensus 96 -~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 96 -KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp -EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred -EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 66766433321 222334 6689999999988774
No 248
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.71 E-value=4.1e-08 Score=91.59 Aligned_cols=107 Identities=14% Similarity=0.099 Sum_probs=74.3
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------------CCcEEEccCCCCC-CCCCCccEEEEcccccCC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTP-LNSSSVDVAVFCLSLMGI 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~lp-~~~~~fD~Vi~~~~l~~~ 202 (294)
++.+|||+|||+|.++..++ ..|+++|+|+. ...+.++|+.... ...+.||+|++.......
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 47899999999999998887 35999999981 2346778876532 213449999987554221
Q ss_pred ----------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHH----HHHHHHHCCCeEE
Q 022592 203 ----------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNK----FSKAVCDLGFAPV 254 (294)
Q Consensus 203 ----------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~----~~~~l~~~Gf~~~ 254 (294)
+...++..+.++|+|||.|+++...... +.+. +...+.++|..+.
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~-------~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL-------RLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC-------CHHHHHHHHHHHHHHhCCeEE
Confidence 3457889999999999999987644322 2344 4455566665443
No 249
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.70 E-value=1.4e-08 Score=94.80 Aligned_cols=111 Identities=16% Similarity=0.090 Sum_probs=77.5
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC------------C-----CCcEEEccCCCCCC----CCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS------------N-----DPSVIACDMSNTPL----NSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~------------~-----~~~~~~~d~~~lp~----~~~~fD~Vi~ 195 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ . ++.++.+|+..... ...+||+|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 66799999999999988876 3799999996 1 45688888866421 1468999999
Q ss_pred cccccC----------CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 196 CLSLMG----------INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 196 ~~~l~~----------~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
...... .....++.++.++|+|||+++++......... ...+.+...+.++|+...
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSD---LFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHH---HHHHHHHHHHHHHTCCEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH---HHHHHHHHHHHHcCCeEE
Confidence 754321 24568899999999999999997644332210 011234456677786543
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.68 E-value=2.6e-08 Score=89.48 Aligned_cols=70 Identities=24% Similarity=0.319 Sum_probs=51.8
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCCCCCCc
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~f 190 (294)
.+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..++++ +|
T Consensus 31 ~~~i~~~~~~~-~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~ 107 (299)
T 2h1r_A 31 LDKIIYAAKIK-SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KF 107 (299)
T ss_dssp HHHHHHHHCCC-TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CC
T ss_pred HHHHHHhcCCC-CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cC
Confidence 45566665443 66799999999999999887 3899999986 3577889999887764 79
Q ss_pred cEEEEcccccC
Q 022592 191 DVAVFCLSLMG 201 (294)
Q Consensus 191 D~Vi~~~~l~~ 201 (294)
|+|+++...++
T Consensus 108 D~Vv~n~py~~ 118 (299)
T 2h1r_A 108 DVCTANIPYKI 118 (299)
T ss_dssp SEEEEECCGGG
T ss_pred CEEEEcCCccc
Confidence 99999876654
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.66 E-value=4.6e-08 Score=92.69 Aligned_cols=143 Identities=14% Similarity=0.177 Sum_probs=94.9
Q ss_pred CCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------------------cceEEEeccC---------------C
Q 022592 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------------------NKVFSFDLVS---------------N 171 (294)
Q Consensus 125 ~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------------------~~v~gvD~s~---------------~ 171 (294)
|...++.+++.+... ++.+|||+|||+|.++..++ ..++|+|+++ .
T Consensus 156 P~~v~~~mv~~l~~~-~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 156 PRPLIQAMVDCINPQ-MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CHHHHHHHHHHHCCC-TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHhCCC-CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 344455666666543 56799999999999877653 3689999987 1
Q ss_pred --CCcEEEccCCCCCCCCCCccEEEEcccccCC---C---------------HHHHHHHHHHhcCcCcEEEEEeecCCCC
Q 022592 172 --DPSVIACDMSNTPLNSSSVDVAVFCLSLMGI---N---------------FPNYLQEAQRVLKPSGWLLIAEVKSRFD 231 (294)
Q Consensus 172 --~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~---~---------------~~~~l~el~r~LkpgG~l~i~e~~~~~~ 231 (294)
++.+.++|....+.. ..||+|+++..+.+. + ...++..+.++|+|||.+.++...+...
T Consensus 235 ~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~ 313 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLF 313 (445)
T ss_dssp SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHH
T ss_pred cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccc
Confidence 567899998776653 489999998777652 1 1378999999999999999876443221
Q ss_pred CCCCCCCHHHHHH-HHHHCCCeEEEEec------cCCeEEEEEEEECC
Q 022592 232 PNTGGADPNKFSK-AVCDLGFAPVSKDF------SNKMFIMFYFKKKE 272 (294)
Q Consensus 232 ~~~~~~~~~~~~~-~l~~~Gf~~~~~~~------~~~~f~~i~~~k~~ 272 (294)
.. -....+.+ +++..++..+..-. ....-.+++++|..
T Consensus 314 ~~---~~~~~iR~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~~ 358 (445)
T 2okc_A 314 EA---GAGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQ 358 (445)
T ss_dssp CS---THHHHHHHHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEESS
T ss_pred cC---cHHHHHHHHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECCC
Confidence 11 02245665 55665565443211 12334566777754
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.63 E-value=5.5e-08 Score=87.25 Aligned_cols=74 Identities=22% Similarity=0.201 Sum_probs=60.5
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------CCCcEEEccCCCCCCCCCCc
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNSSSV 190 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~~~f 190 (294)
..++.+++.+... ++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+++++.+|
T Consensus 37 ~i~~~Iv~~l~~~-~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 37 NFVNKAVESANLT-KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHHHHTTCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHHHHhcCCC-CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 3456667766554 66799999999999999887 4899999998 47789999999998888889
Q ss_pred cEEEEcccccC
Q 022592 191 DVAVFCLSLMG 201 (294)
Q Consensus 191 D~Vi~~~~l~~ 201 (294)
|+|+++..++.
T Consensus 116 D~Iv~NlPy~i 126 (295)
T 3gru_A 116 NKVVANLPYQI 126 (295)
T ss_dssp SEEEEECCGGG
T ss_pred cEEEEeCcccc
Confidence 99998866543
No 253
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.59 E-value=1.2e-07 Score=83.33 Aligned_cols=87 Identities=13% Similarity=0.104 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCcccHHHHHhcc-----ceEEEeccCC-------------CCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 140 SPSLVIADFGCGDARLAKSVKN-----KVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~~-------------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
.++.+|||||||+|.|+..++. .++|+|++.+ ++..+..++....++.+.||+|+|..+..-
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCc
Confidence 4667999999999999997652 5677777631 334455666556677789999999876661
Q ss_pred ----CCHH---HHHHHHHHhcCcC-cEEEEEee
Q 022592 202 ----INFP---NYLQEAQRVLKPS-GWLLIAEV 226 (294)
Q Consensus 202 ----~~~~---~~l~el~r~Lkpg-G~l~i~e~ 226 (294)
.|-. .++..+.++|+|| |.|++--+
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 1221 3468888999999 99999543
No 254
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.57 E-value=1.5e-07 Score=92.40 Aligned_cols=117 Identities=18% Similarity=0.263 Sum_probs=82.6
Q ss_pred CcHHHHHHHhcChhhHHHHHHhHHhhhccCCCcHHHHHHHHhhcc---CCCCEEEEEcCcccHHHHHhc----c-----c
Q 022592 95 TGKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDH---SPSLVIADFGCGDARLAKSVK----N-----K 162 (294)
Q Consensus 95 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~VLDiGcG~G~~~~~l~----~-----~ 162 (294)
-.....+.|..++-.|+.|.+...... .+.+... ....+|||||||+|.+..... . +
T Consensus 319 L~s~tYevFEkD~vKy~~Ye~AI~~Al-----------~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vk 387 (637)
T 4gqb_A 319 LESQTYEVFEKDPIKYSQYQQAIYKCL-----------LDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK 387 (637)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHHH-----------HHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhhhhhcCChhhHHHHHHHHHHHH-----------HHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcE
Confidence 455677888999999999886543322 2222221 123479999999999844332 1 6
Q ss_pred eEEEeccC---------------CCCcEEEccCCCCCCCCCCccEEEEcccccC---CCHHHHHHHHHHhcCcCcEEEE
Q 022592 163 VFSFDLVS---------------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG---INFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 163 v~gvD~s~---------------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~---~~~~~~l~el~r~LkpgG~l~i 223 (294)
|++|+-++ +.+.++.+|++++.+| +++|+||+-..=.. .....++....|.|||||.++=
T Consensus 388 VyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 388 LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred EEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 89999987 4688999999998876 57999997433222 2344788888999999998653
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.56 E-value=5.7e-07 Score=84.66 Aligned_cols=99 Identities=16% Similarity=0.201 Sum_probs=69.8
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccCC--------------CCcEEEccCCCCCCCCCCccEEEEcccccCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMGIN 203 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~ 203 (294)
++.+|||+|||+|.++..++ ..|+|+|+|+. .+.++.+|+..+... +||+|++.......
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g~- 366 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAGL- 366 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTCS-
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccch-
Confidence 56799999999999999887 48999999971 167899999886532 79999986542221
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
...+++.+. .|+|||.++++. ++..+..-+....|++..
T Consensus 367 ~~~~~~~l~-~l~p~givyvsc------------~p~tlarDl~~l~y~l~~ 405 (425)
T 2jjq_A 367 HPRLVKRLN-REKPGVIVYVSC------------NPETFARDVKMLDYRIDE 405 (425)
T ss_dssp CHHHHHHHH-HHCCSEEEEEES------------CHHHHHHHHHHSSCCEEE
T ss_pred HHHHHHHHH-hcCCCcEEEEEC------------ChHHHHhHHhhCeEEEEE
Confidence 124555554 599999999863 345555444443366655
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.55 E-value=5.4e-07 Score=83.45 Aligned_cols=116 Identities=17% Similarity=0.267 Sum_probs=78.0
Q ss_pred CCEEEEEcCcccHHHHHhcc----------------------ceEEEeccCC------------------------CCcE
Q 022592 142 SLVIADFGCGDARLAKSVKN----------------------KVFSFDLVSN------------------------DPSV 175 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~~----------------------~v~gvD~s~~------------------------~~~~ 175 (294)
..+|+|+||++|..+..+.. .|+..|+... +..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 46899999999987765531 3445565531 1234
Q ss_pred EEccC---CCCCCCCCCccEEEEcccccCC-CH------------------------H---------------HHHHHHH
Q 022592 176 IACDM---SNTPLNSSSVDVAVFCLSLMGI-NF------------------------P---------------NYLQEAQ 212 (294)
Q Consensus 176 ~~~d~---~~lp~~~~~fD~Vi~~~~l~~~-~~------------------------~---------------~~l~el~ 212 (294)
+.+.. ..-.||++++|+|+++.+|||. +. . .+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433 3356889999999999999993 11 1 1256668
Q ss_pred HhcCcCcEEEEEeecCCCC--------------------------------CCCCCCCHHHHHHHHHHCC-CeEEEEe
Q 022592 213 RVLKPSGWLLIAEVKSRFD--------------------------------PNTGGADPNKFSKAVCDLG-FAPVSKD 257 (294)
Q Consensus 213 r~LkpgG~l~i~e~~~~~~--------------------------------~~~~~~~~~~~~~~l~~~G-f~~~~~~ 257 (294)
+.|+|||.+++.-...... ......+.+++..++++.| |.+...+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999999999975433221 1122368999999999985 7777654
No 257
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.49 E-value=1.8e-07 Score=92.05 Aligned_cols=117 Identities=19% Similarity=0.198 Sum_probs=80.4
Q ss_pred cHHHHHHHhcChhhHHHHHHhHHhhhccCCCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHH----h--cc--------
Q 022592 96 GKEALDYFNENPALFDMYHSGYQEQMSHWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKS----V--KN-------- 161 (294)
Q Consensus 96 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~----l--~~-------- 161 (294)
.....+.|..+.-.|+.|....... +.+.......+..|||||||+|.+... . +.
T Consensus 375 es~tYe~fekD~vRy~~Y~~AI~~a-----------l~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~ 443 (745)
T 3ua3_A 375 DSGVYNTFEQDQIKYDVYGEAVVGA-----------LKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQE 443 (745)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHH-----------HHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSC
T ss_pred chHHHHHHcCChhhHHHHHHHHHHH-----------HHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCcccccccc
Confidence 4455677778888888877544221 112221111235799999999998532 1 12
Q ss_pred ----ceEEEeccC---------------CCCcEEEccCCCCCCC-----CCCccEEEEcccccCC---CHHHHHHHHHHh
Q 022592 162 ----KVFSFDLVS---------------NDPSVIACDMSNTPLN-----SSSVDVAVFCLSLMGI---NFPNYLQEAQRV 214 (294)
Q Consensus 162 ----~v~gvD~s~---------------~~~~~~~~d~~~lp~~-----~~~fD~Vi~~~~l~~~---~~~~~l~el~r~ 214 (294)
+|+|||.++ +.+.++.+|++++.++ .+.+|+||+-..=.+. -....|..+.+.
T Consensus 444 ~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~ 523 (745)
T 3ua3_A 444 SLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGF 523 (745)
T ss_dssp CCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGG
T ss_pred ccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHh
Confidence 899999986 4689999999998764 5789999986553332 235788888899
Q ss_pred cCcCcEEEE
Q 022592 215 LKPSGWLLI 223 (294)
Q Consensus 215 LkpgG~l~i 223 (294)
|+|||.++=
T Consensus 524 Lkp~Gi~iP 532 (745)
T 3ua3_A 524 LKPTTISIP 532 (745)
T ss_dssp SCTTCEEES
T ss_pred CCCCcEEEC
Confidence 999997654
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.49 E-value=8.5e-08 Score=83.59 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=50.1
Q ss_pred HHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------CCCcEEEccCCCCCCCC-CCccE
Q 022592 130 NIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNS-SSVDV 192 (294)
Q Consensus 130 ~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~-~~fD~ 192 (294)
+.+++.+... ++.+|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+++++ ..| .
T Consensus 20 ~~i~~~~~~~-~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 20 DKIMTNIRLN-EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp HHHHTTCCCC-TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-E
T ss_pred HHHHHhCCCC-CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-E
Confidence 3444444332 56799999999999999887 4899999986 36789999999988764 445 4
Q ss_pred EEEcccc
Q 022592 193 AVFCLSL 199 (294)
Q Consensus 193 Vi~~~~l 199 (294)
|+++..+
T Consensus 98 vv~nlPy 104 (244)
T 1qam_A 98 IFGNIPY 104 (244)
T ss_dssp EEEECCG
T ss_pred EEEeCCc
Confidence 5555443
No 259
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.47 E-value=1.8e-07 Score=90.71 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=91.6
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----------------------cceEEEeccC-------------
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----------------------NKVFSFDLVS------------- 170 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----------------------~~v~gvD~s~------------- 170 (294)
..+..+++.+... ++.+|||.|||+|.++..+. ..++|+|+++
T Consensus 156 ~iv~~mv~~l~p~-~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 156 PLIKTIIHLLKPQ-PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHHCCC-TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccC-CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 3445566666543 56799999999999876553 2689999987
Q ss_pred --CC-----CcEEEccCCCCC-CCCCCccEEEEcccccCC-C--------------HHHHHHHHHHhcCcCcEEEEEeec
Q 022592 171 --ND-----PSVIACDMSNTP-LNSSSVDVAVFCLSLMGI-N--------------FPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 171 --~~-----~~~~~~d~~~lp-~~~~~fD~Vi~~~~l~~~-~--------------~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
.. +.+.++|....+ .....||+|+++..+... . ...++..+.+.|+|||++.++...
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 22 678888876543 345789999998776542 1 237899999999999999998654
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc-------CCeEEEEEEEECC
Q 022592 228 SRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS-------NKMFIMFYFKKKE 272 (294)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-------~~~f~~i~~~k~~ 272 (294)
+..... -....+.+.|.+.+.-...+... ...-.+++++|..
T Consensus 315 ~~L~~~---~~~~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~ 363 (541)
T 2ar0_A 315 NVLFEG---GKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGT 363 (541)
T ss_dssp HHHHCC---THHHHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBC
T ss_pred cceecC---cHHHHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCC
Confidence 432111 02355666665544322212222 2234677777754
No 260
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.39 E-value=2.4e-06 Score=78.50 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=79.2
Q ss_pred CCEEEEEcCcccHHHHHhcc---------------------ceEEEeccCC----------------CCcEEEc---cCC
Q 022592 142 SLVIADFGCGDARLAKSVKN---------------------KVFSFDLVSN----------------DPSVIAC---DMS 181 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~~---------------------~v~gvD~s~~----------------~~~~~~~---d~~ 181 (294)
..+|+|+||++|..+..+.. .|+..|+..+ +..|+.+ .+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 35799999999986654321 4667787652 1234443 334
Q ss_pred CCCCCCCCccEEEEcccccCC-C---------------------------------HHHHHHHHHHhcCcCcEEEEEeec
Q 022592 182 NTPLNSSSVDVAVFCLSLMGI-N---------------------------------FPNYLQEAQRVLKPSGWLLIAEVK 227 (294)
Q Consensus 182 ~lp~~~~~fD~Vi~~~~l~~~-~---------------------------------~~~~l~el~r~LkpgG~l~i~e~~ 227 (294)
.-.||++++|+|+++.+|||. + +..+|+..++.|+|||.+++.-..
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 467889999999999999993 1 124588889999999999997432
Q ss_pred CCC------------------------------------CCCCCCCCHHHHHHHHHHCCC-eEEEEe
Q 022592 228 SRF------------------------------------DPNTGGADPNKFSKAVCDLGF-APVSKD 257 (294)
Q Consensus 228 ~~~------------------------------------~~~~~~~~~~~~~~~l~~~Gf-~~~~~~ 257 (294)
... .......+.+++..++++.|+ .+...+
T Consensus 212 r~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 212 RRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp CSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 211 111112588999999999965 666543
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.34 E-value=5.6e-07 Score=79.72 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=56.8
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC------------CCCcEEEccCCCCCCCCC-Ccc
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------NDPSVIACDMSNTPLNSS-SVD 191 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------~~~~~~~~d~~~lp~~~~-~fD 191 (294)
.++.+++.+... ++ +|||||||+|.++..++ ..|+|+|+++ .++.++.+|+..+++++. .+|
T Consensus 35 i~~~Iv~~~~~~-~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~ 112 (271)
T 3fut_A 35 HLRRIVEAARPF-TG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGS 112 (271)
T ss_dssp HHHHHHHHHCCC-CS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTE
T ss_pred HHHHHHHhcCCC-CC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCcc
Confidence 345566666554 66 99999999999999887 4899999997 367899999998887643 689
Q ss_pred EEEEcccccC
Q 022592 192 VAVFCLSLMG 201 (294)
Q Consensus 192 ~Vi~~~~l~~ 201 (294)
.|+++...+.
T Consensus 113 ~iv~NlPy~i 122 (271)
T 3fut_A 113 LLVANLPYHI 122 (271)
T ss_dssp EEEEEECSSC
T ss_pred EEEecCcccc
Confidence 9888866554
No 262
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.33 E-value=1.7e-06 Score=79.42 Aligned_cols=111 Identities=9% Similarity=-0.014 Sum_probs=77.9
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHH
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYL 208 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l 208 (294)
.++.++||+||++|.++..+. ..|+|||+.+ +++.++.+|+.....+...||+|+|..+. ++...+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~---~p~~~~ 286 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE---KPAKVA 286 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS---CHHHHH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC---ChHHhH
Confidence 478899999999999999887 4899999887 57889999998877777889999997664 456666
Q ss_pred HHHHHhcCcC---cEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 209 QEAQRVLKPS---GWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 209 ~el~r~Lkpg---G~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
..+.++|..| +.++...+...............+.+.|+..||..
T Consensus 287 ~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 287 ALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp HHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcch
Confidence 6666666554 55544443221100000012345667888899864
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.33 E-value=6.8e-07 Score=78.48 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=53.6
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------CCCcEEEccCCCCCCCC----
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTPLNS---- 187 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp~~~---- 187 (294)
..+.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++
T Consensus 17 i~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 95 (255)
T 3tqs_A 17 VLQKIVSAIHPQ-KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTD 95 (255)
T ss_dssp HHHHHHHHHCCC-TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCS
T ss_pred HHHHHHHhcCCC-CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccC
Confidence 345566666554 66799999999999999987 4899999997 36789999999987653
Q ss_pred CCccEEEEccc
Q 022592 188 SSVDVAVFCLS 198 (294)
Q Consensus 188 ~~fD~Vi~~~~ 198 (294)
+.|| |+++..
T Consensus 96 ~~~~-vv~NlP 105 (255)
T 3tqs_A 96 KPLR-VVGNLP 105 (255)
T ss_dssp SCEE-EEEECC
T ss_pred CCeE-EEecCC
Confidence 4688 566544
No 264
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.33 E-value=7e-07 Score=78.47 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=78.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----------------cceEEEeccC---------------------------------
Q 022592 141 PSLVIADFGCGDARLAKSVK-----------------NKVFSFDLVS--------------------------------- 170 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----------------~~v~gvD~s~--------------------------------- 170 (294)
+..+|||||+|+|..+..+. ..++++|..+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 44689999999999655421 2678898654
Q ss_pred ----------CCCcEEEccCCC-CCCCC----CCccEEEEccc-cc-CCC--HHHHHHHHHHhcCcCcEEEEEeecCCCC
Q 022592 171 ----------NDPSVIACDMSN-TPLNS----SSVDVAVFCLS-LM-GIN--FPNYLQEAQRVLKPSGWLLIAEVKSRFD 231 (294)
Q Consensus 171 ----------~~~~~~~~d~~~-lp~~~----~~fD~Vi~~~~-l~-~~~--~~~~l~el~r~LkpgG~l~i~e~~~~~~ 231 (294)
.++.++.+|+.+ ++.-+ ..||+|+.... -. +.+ ...++..++++|+|||.|+...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 123456677655 44222 27999998532 11 111 3579999999999999988632
Q ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEEC
Q 022592 232 PNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKK 271 (294)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~ 271 (294)
....+...|..+||.+.........-.++...+.
T Consensus 214 ------aa~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 214 ------SAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVME 247 (257)
T ss_dssp ------CBHHHHHHHHHHTEEEEEECCSTTCCCEEEEEEC
T ss_pred ------CCHHHHHHHHHCCCEEEeCCCCCCCCceEEEEec
Confidence 1257888899999998875543333345555554
No 265
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.31 E-value=1.3e-06 Score=69.62 Aligned_cols=97 Identities=9% Similarity=0.176 Sum_probs=66.3
Q ss_pred HHHHHHhhcc-CCCCEEEEEcCccc-HHHHHhcc----ceEEEeccCCCCcEEEccCCCCCCCC-CCccEEEEcccccCC
Q 022592 130 NIIVKWLKDH-SPSLVIADFGCGDA-RLAKSVKN----KVFSFDLVSNDPSVIACDMSNTPLNS-SSVDVAVFCLSLMGI 202 (294)
Q Consensus 130 ~~~~~~l~~~-~~~~~VLDiGcG~G-~~~~~l~~----~v~gvD~s~~~~~~~~~d~~~lp~~~-~~fD~Vi~~~~l~~~ 202 (294)
+.+.+++... .++.+|||||||+| ..+..|+. .|+++|+++..+.+++.|+.+..+.. ..||+|.+... -.
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsirP--P~ 100 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIRP--PA 100 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEESC--CT
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccceEEccCCCCcccccCCcCEEEEcCC--CH
Confidence 3455555443 24569999999999 58888864 69999999998889999998843321 47999976532 12
Q ss_pred CHHHHHHHHHHhcCcCcEEEEEeecCCC
Q 022592 203 NFPNYLQEAQRVLKPSGWLLIAEVKSRF 230 (294)
Q Consensus 203 ~~~~~l~el~r~LkpgG~l~i~e~~~~~ 230 (294)
+....+.++++. -|.-++|..+....
T Consensus 101 El~~~i~~lA~~--v~adliI~pL~~E~ 126 (153)
T 2k4m_A 101 EIHSSLMRVADA--VGARLIIKPLTGED 126 (153)
T ss_dssp TTHHHHHHHHHH--HTCEEEEECBTTBC
T ss_pred HHHHHHHHHHHH--cCCCEEEEcCCCCc
Confidence 445555555543 36678887665544
No 266
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.30 E-value=2.5e-06 Score=76.96 Aligned_cols=109 Identities=15% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CCCcEEEccCCCCCCCC---CCccEEEE
Q 022592 140 SPSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------NDPSVIACDMSNTPLNS---SSVDVAVF 195 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~~~~~~~d~~~lp~~~---~~fD~Vi~ 195 (294)
.++.+|||+|||+|..+..++ ..|+++|+++ .++.++.+|+..++... .+||.|++
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 377899999999999887765 3799999997 36788899987765432 57999997
Q ss_pred ccc------ccC-CC-----------H-------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHC-
Q 022592 196 CLS------LMG-IN-----------F-------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDL- 249 (294)
Q Consensus 196 ~~~------l~~-~~-----------~-------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~- 249 (294)
... +.. .+ . ..+|..+.++|+ ||.|+++...-... -+.+.+..+|++.
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~-----Ene~~v~~~l~~~~ 254 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQE-----ENEDVVRDALQQNP 254 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGG-----GTHHHHHHHHTTST
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChH-----HhHHHHHHHHHhCC
Confidence 322 111 11 1 135777777786 99888865332111 1335566667665
Q ss_pred C-CeEE
Q 022592 250 G-FAPV 254 (294)
Q Consensus 250 G-f~~~ 254 (294)
+ |+++
T Consensus 255 ~~~~~~ 260 (309)
T 2b9e_A 255 GAFRLA 260 (309)
T ss_dssp TTEEEC
T ss_pred CcEEEe
Confidence 3 5543
No 267
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.29 E-value=1.9e-06 Score=75.87 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCcccHHHHHhcc-----ceEEEeccCC-------------CCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 140 SPSLVIADFGCGDARLAKSVKN-----KVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~~-------------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
.++.+|||||||+|.|+..++. .|+|+|++.. ++..+..++....++...+|+|+|..+...
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApns 168 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESS 168 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCccCC
Confidence 4667999999999999997762 6889999752 122233333333455688999999877761
Q ss_pred ----CCH---HHHHHHHHHhcCcC--cEEEEEeec
Q 022592 202 ----INF---PNYLQEAQRVLKPS--GWLLIAEVK 227 (294)
Q Consensus 202 ----~~~---~~~l~el~r~Lkpg--G~l~i~e~~ 227 (294)
.|- ..++.-+.++|+|| |.|++--+.
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 111 13466677999999 999995443
No 268
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.29 E-value=1.5e-06 Score=80.96 Aligned_cols=85 Identities=12% Similarity=0.104 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc---c----------------------------------------ceEEEeccC------
Q 022592 140 SPSLVIADFGCGDARLAKSVK---N----------------------------------------KVFSFDLVS------ 170 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~----------------------------------------~v~gvD~s~------ 170 (294)
.++..|||++||+|.++..++ . .|+|+|+++
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 356789999999999877664 1 299999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCCccEEEEcccccC-C----CHHHHHHHHHHhcCc--CcEEEEEe
Q 022592 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-I----NFPNYLQEAQRVLKP--SGWLLIAE 225 (294)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~-~----~~~~~l~el~r~Lkp--gG~l~i~e 225 (294)
..+.+.++|+.+++.+ .+||+|+++..+.. . +...+..++.++|++ ||.++++.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2578999999998765 58999999866543 1 234556666667766 88888865
No 269
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.27 E-value=1.4e-06 Score=84.40 Aligned_cols=144 Identities=12% Similarity=0.110 Sum_probs=92.0
Q ss_pred CCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc--------------------cceEEEeccC------------C-
Q 022592 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--------------------NKVFSFDLVS------------N- 171 (294)
Q Consensus 125 ~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~--------------------~~v~gvD~s~------------~- 171 (294)
|...+..+++.+... + .+|||.+||+|.++..+. ..++|+|+++ .
T Consensus 230 P~~Vv~lmv~ll~p~-~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 230 PKSIVTLIVEMLEPY-K-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CHHHHHHHHHHHCCC-S-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcC-C-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 344556666666543 3 399999999999876652 2689999987 1
Q ss_pred ---CCcEEEccCCCCC-CCCCCccEEEEcccccCC------------------------------CHHHHHHHHHHhcCc
Q 022592 172 ---DPSVIACDMSNTP-LNSSSVDVAVFCLSLMGI------------------------------NFPNYLQEAQRVLKP 217 (294)
Q Consensus 172 ---~~~~~~~d~~~lp-~~~~~fD~Vi~~~~l~~~------------------------------~~~~~l~el~r~Lkp 217 (294)
++.+..+|....+ ++...||+|+++..+... ....++..+.+.|+|
T Consensus 308 i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 2223667765443 456789999997665421 012689999999999
Q ss_pred CcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCC-------eEEEEEEEECC
Q 022592 218 SGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNK-------MFIMFYFKKKE 272 (294)
Q Consensus 218 gG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-------~f~~i~~~k~~ 272 (294)
||++.++......... .-....+.+.|-+.+.-..-+..... ...+++++|..
T Consensus 388 gGr~aiVlP~g~L~~~--~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 388 TGSMALLLANGSMSSN--TNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDK 447 (544)
T ss_dssp EEEEEEEEETHHHHCC--GGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCC
T ss_pred CceEEEEecchhhhcC--cchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCC
Confidence 9999887644432211 01346788877777764333333333 34677777654
No 270
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.26 E-value=1.1e-06 Score=81.66 Aligned_cols=85 Identities=9% Similarity=0.121 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCcccHHHHHhc-------------------------------------------cceEEEeccC------
Q 022592 140 SPSLVIADFGCGDARLAKSVK-------------------------------------------NKVFSFDLVS------ 170 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-------------------------------------------~~v~gvD~s~------ 170 (294)
.++..|||+|||+|.++..++ ..|+|+|+++
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 356789999999999887664 1489999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCCccEEEEcccccC-C----CHHHHHHHHHHhcCc--CcEEEEEe
Q 022592 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-I----NFPNYLQEAQRVLKP--SGWLLIAE 225 (294)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~-~----~~~~~l~el~r~Lkp--gG~l~i~e 225 (294)
..+++.++|+.+++.+ .+||+|+++..+.. . +...+..++.++|++ ||.+++..
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 2578999999988764 58999999877653 1 345666777777776 88888865
No 271
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.23 E-value=2.6e-06 Score=79.13 Aligned_cols=85 Identities=13% Similarity=0.127 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCcccHHHHHhc---c----------------------------------------ceEEEeccC------
Q 022592 140 SPSLVIADFGCGDARLAKSVK---N----------------------------------------KVFSFDLVS------ 170 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~----------------------------------------~v~gvD~s~------ 170 (294)
.++..|||.+||+|.++..++ . .++|+|+++
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 366789999999999887664 1 299999997
Q ss_pred ----------CCCcEEEccCCCCCCCCCCccEEEEcccccC-C----CHHHHHHHHHHhcCc--CcEEEEEe
Q 022592 171 ----------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG-I----NFPNYLQEAQRVLKP--SGWLLIAE 225 (294)
Q Consensus 171 ----------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~-~----~~~~~l~el~r~Lkp--gG~l~i~e 225 (294)
..+.+..+|+.+++.+ .+||+|+++..+.. . +...+..++.+.|++ ||.++++.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 2478999999988765 48999999866543 2 345667777777776 89888875
No 272
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.20 E-value=1e-06 Score=81.31 Aligned_cols=80 Identities=9% Similarity=0.212 Sum_probs=59.3
Q ss_pred CCEEEEEcCcccHHHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC--CCC--------------
Q 022592 142 SLVIADFGCGDARLAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP--LNS-------------- 187 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp--~~~-------------- 187 (294)
+.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+..+. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 4689999999999999887 4799999997 35778888886642 221
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
.+||+|++...-. .+..++.++|+++|.++++..
T Consensus 294 ~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 294 YQCETIFVDPPRS-----GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEEEES
T ss_pred CCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEEEEC
Confidence 3799998753321 234567777889998888764
No 273
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.17 E-value=1.2e-06 Score=80.31 Aligned_cols=85 Identities=15% Similarity=0.093 Sum_probs=61.7
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC----------C-------------CCcEEEccCCCCCC----CCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS----------N-------------DPSVIACDMSNTPL----NSSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------~-------------~~~~~~~d~~~lp~----~~~~ 189 (294)
.+.+||+||||+|.++..++ .+|++||+++ + +++++.+|+....- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 45699999999999998775 3799999986 1 35677777765321 3578
Q ss_pred ccEEEEcccc-cC-C-----CHHHHHHHH----HHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSL-MG-I-----NFPNYLQEA----QRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l-~~-~-----~~~~~l~el----~r~LkpgG~l~i~e 225 (294)
||+|++...- .. . --..+++.+ .++|+|||++++-.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 9999987543 11 1 224666666 89999999998853
No 274
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.16 E-value=1.7e-05 Score=70.40 Aligned_cols=95 Identities=9% Similarity=0.035 Sum_probs=63.2
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhcc-----ceEEEeccCC-------------CCcEEEccCCCCCCCCCCccE
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVKN-----KVFSFDLVSN-------------DPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~~-----~v~gvD~s~~-------------~~~~~~~d~~~lp~~~~~fD~ 192 (294)
.+.+. ....++.+||||||++|.|+..++. .|+|+|++.. ++.....++.-..+..+.+|+
T Consensus 72 ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~Dl 150 (300)
T 3eld_A 72 WLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDT 150 (300)
T ss_dssp HHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred HHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCE
Confidence 34444 3335778999999999999998874 5788998742 111222222223345678999
Q ss_pred EEEcccccCC-----CH---HHHHHHHHHhcCcC-cEEEEEeec
Q 022592 193 AVFCLSLMGI-----NF---PNYLQEAQRVLKPS-GWLLIAEVK 227 (294)
Q Consensus 193 Vi~~~~l~~~-----~~---~~~l~el~r~Lkpg-G~l~i~e~~ 227 (294)
|+|..+-. . |- ..++.-+.++|+|| |.|++--+.
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 99977665 2 11 23466678999999 999996443
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.13 E-value=6.3e-06 Score=71.95 Aligned_cols=70 Identities=23% Similarity=0.221 Sum_probs=50.8
Q ss_pred HHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc----cceEEEeccC-----------CCCcEEEccCCCCCCCCCC-cc
Q 022592 128 PVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK----NKVFSFDLVS-----------NDPSVIACDMSNTPLNSSS-VD 191 (294)
Q Consensus 128 ~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-----------~~~~~~~~d~~~lp~~~~~-fD 191 (294)
..+.+++.+... ++.+|||||||+|.++..++ .+|+|+|+++ .++.++.+|+..+++++.. ..
T Consensus 19 i~~~iv~~~~~~-~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 19 VLKKIAEELNIE-EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHHHTTCC-TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHHHhcCCC-CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 345566666544 56799999999999999886 3799999987 2568899999998876421 22
Q ss_pred EEEEccc
Q 022592 192 VAVFCLS 198 (294)
Q Consensus 192 ~Vi~~~~ 198 (294)
.|+++..
T Consensus 98 ~vv~NlP 104 (249)
T 3ftd_A 98 KVVGNLP 104 (249)
T ss_dssp EEEEECC
T ss_pred EEEEECc
Confidence 4454443
No 276
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.08 E-value=5.9e-07 Score=78.99 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=48.3
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC-----------------------CCCcEEEccCCCC-C-CCC--CCc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------------------NDPSVIACDMSNT-P-LNS--SSV 190 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-----------------------~~~~~~~~d~~~l-p-~~~--~~f 190 (294)
++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+..+ + +++ ++|
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 45789999999999998887 4899999998 2378899998763 3 444 689
Q ss_pred cEEEEcccccC
Q 022592 191 DVAVFCLSLMG 201 (294)
Q Consensus 191 D~Vi~~~~l~~ 201 (294)
|+|++...+.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999877665
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.06 E-value=1.5e-05 Score=77.27 Aligned_cols=144 Identities=14% Similarity=0.126 Sum_probs=93.7
Q ss_pred CCcHHHHHHHHhhc---cCCCCEEEEEcCcccHHHHHhc--------cceEEEeccC------------C-----CCcEE
Q 022592 125 PELPVNIIVKWLKD---HSPSLVIADFGCGDARLAKSVK--------NKVFSFDLVS------------N-----DPSVI 176 (294)
Q Consensus 125 ~~~~~~~~~~~l~~---~~~~~~VLDiGcG~G~~~~~l~--------~~v~gvD~s~------------~-----~~~~~ 176 (294)
|...+..+++.+.. ..++.+|||.+||+|.++..+. ..++|+|+++ . ++.+.
T Consensus 202 P~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~ 281 (542)
T 3lkd_A 202 PQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLH 281 (542)
T ss_dssp CHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceE
Confidence 34455666676663 2256799999999999877653 3689999987 1 34578
Q ss_pred EccCCCC--C-CCCCCccEEEEcccccC--C-------C---------------HHHHHHHHHHhcC-cCcEEEEEeecC
Q 022592 177 ACDMSNT--P-LNSSSVDVAVFCLSLMG--I-------N---------------FPNYLQEAQRVLK-PSGWLLIAEVKS 228 (294)
Q Consensus 177 ~~d~~~l--p-~~~~~fD~Vi~~~~l~~--~-------~---------------~~~~l~el~r~Lk-pgG~l~i~e~~~ 228 (294)
.+|.... | .....||+|+++..+.. . + ...++..+.+.|+ |||++.++...+
T Consensus 282 ~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 282 NADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp ESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 8888765 3 34678999998755431 0 0 1248999999999 999998876554
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCeEEEEeccC-------CeEEEEEEEEC
Q 022592 229 RFDPNTGGADPNKFSKAVCDLGFAPVSKDFSN-------KMFIMFYFKKK 271 (294)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-------~~f~~i~~~k~ 271 (294)
..... -....+.+.|-+.+.-..-+.... ..-.+++++|.
T Consensus 362 ~Lf~~---~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~ 408 (542)
T 3lkd_A 362 VLFRG---NAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKN 408 (542)
T ss_dssp HHHCC---THHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSS
T ss_pred HhhCC---chhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEecC
Confidence 33211 123668777777665333333322 22356666664
No 278
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.02 E-value=2.2e-06 Score=79.71 Aligned_cols=82 Identities=12% Similarity=0.014 Sum_probs=62.6
Q ss_pred CCCEEEEEcCcccHHHHHhc------cceEEEeccC---------------CC--CcEEEccCCCCC--CCCCCccEEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK------NKVFSFDLVS---------------ND--PSVIACDMSNTP--LNSSSVDVAVF 195 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~---------------~~--~~~~~~d~~~lp--~~~~~fD~Vi~ 195 (294)
++.+|||++||+|.++..++ ..|+++|+++ .+ +.++.+|+..+. ...+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 56799999999999988765 3689999997 22 678888875531 12457999998
Q ss_pred cccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 196 CLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 196 ~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.. +-....++..+.++|+|||+|+++-
T Consensus 132 DP---~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP---FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC---SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC---CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 76 2234578999999999999888863
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.98 E-value=6e-06 Score=73.38 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=46.2
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cc----eEEEeccC-----------CCCcEEEccCCCCCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NK----VFSFDLVS-----------NDPSVIACDMSNTPLNS 187 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~----v~gvD~s~-----------~~~~~~~~d~~~lp~~~ 187 (294)
.+.+++.+... ++.+|||||||+|.++..++ .. |+|+|+++ .++.++.+|+..+++++
T Consensus 31 ~~~iv~~~~~~-~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 31 IDAIVAAIRPE-RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHHCCC-TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCC-CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 45566666544 66799999999999999887 35 99999997 36789999999888654
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.97 E-value=2.3e-06 Score=75.17 Aligned_cols=89 Identities=11% Similarity=-0.004 Sum_probs=59.6
Q ss_pred HHHHHHhhccCCC--CEEEEEcCcccHHHHHhc---cceEEEeccC------------------------CCCcEEEccC
Q 022592 130 NIIVKWLKDHSPS--LVIADFGCGDARLAKSVK---NKVFSFDLVS------------------------NDPSVIACDM 180 (294)
Q Consensus 130 ~~~~~~l~~~~~~--~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------------------~~~~~~~~d~ 180 (294)
+.+++.+... ++ .+|||+|||+|.++..++ ..|+++|+++ .+++++.+|+
T Consensus 76 e~l~~al~l~-~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIK-GDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCB-TTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhccc-CCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 3355555433 45 799999999999998887 4899999997 1356888887
Q ss_pred CC-CCCCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCc
Q 022592 181 SN-TPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSG 219 (294)
Q Consensus 181 ~~-lp~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG 219 (294)
.. ++...++||+|++...+.+.....++.+..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 65 3322246999999888766433355566666666644
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.96 E-value=2.6e-06 Score=74.56 Aligned_cols=70 Identities=13% Similarity=0.072 Sum_probs=51.4
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc--cc--eEEEeccC-------------CCCcEEEccCCCCCCCCC---
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--NK--VFSFDLVS-------------NDPSVIACDMSNTPLNSS--- 188 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~--~~--v~gvD~s~-------------~~~~~~~~d~~~lp~~~~--- 188 (294)
+..+++.+... ++.+|||||||+|.++. +. .. |+|+|+++ .++.++.+|+..+++++.
T Consensus 10 ~~~iv~~~~~~-~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 10 IDSIVSAINPQ-KGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp HHHHHHHHCCC-TTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHH
T ss_pred HHHHHHhcCCC-CcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcc
Confidence 45566666543 66789999999999998 65 36 99999997 257889999988876432
Q ss_pred --CccEEEEccccc
Q 022592 189 --SVDVAVFCLSLM 200 (294)
Q Consensus 189 --~fD~Vi~~~~l~ 200 (294)
..|.|+++....
T Consensus 88 ~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 88 MGQPLRVFGNLPYN 101 (252)
T ss_dssp HTSCEEEEEECCTT
T ss_pred cCCceEEEECCCCC
Confidence 346777775543
No 282
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.94 E-value=2.7e-06 Score=78.86 Aligned_cols=81 Identities=14% Similarity=0.015 Sum_probs=60.5
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC------------C---------------C---CcEEEccCCCCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------N---------------D---PSVIACDMSNTPL 185 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~------------~---------------~---~~~~~~d~~~lp~ 185 (294)
++.+|||+|||+|.++..++ ..|+++|+++ . . +.++.+|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 46799999999999988775 2699999987 1 2 4566777755321
Q ss_pred -CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEE
Q 022592 186 -NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 186 -~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~ 224 (294)
..+.||+|++.. ......++..+.+.|+|||.++++
T Consensus 127 ~~~~~fD~I~lDP---~~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDP---FGSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECC---SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeCC---CCCHHHHHHHHHHhcCCCCEEEEE
Confidence 135799999643 124578899999999999988876
No 283
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.90 E-value=5.7e-05 Score=64.78 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC--------------CCcEEEc-cCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN--------------DPSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~--------------~~~~~~~-d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++..||||||++|.++..++ ..|+|+|+... .+.|..+ |+..++- ..+|.|+|.-.=
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIge 154 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGE 154 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC--ccccEEEEecCC
Confidence 467799999999999999776 37999999872 4567777 8765543 669999987655
Q ss_pred cCCCHH-------HHHHHHHHhcCcCcEEEEE
Q 022592 200 MGINFP-------NYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 200 ~~~~~~-------~~l~el~r~LkpgG~l~i~ 224 (294)
...++. .+|.-+.++|++ |.++|=
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 433321 366666789998 777773
No 284
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.89 E-value=5.9e-06 Score=74.20 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=53.2
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------------CCCcEEEccCCCCC--CC-
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------NDPSVIACDMSNTP--LN- 186 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------~~~~~~~~d~~~lp--~~- 186 (294)
++.+++.+... ++.+|||+|||+|.++..++ ..|+|+|+++ .++.++.+|+..++ +.
T Consensus 15 l~e~l~~L~~~-~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 15 VREVIEFLKPE-DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHHCCC-TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcCCC-CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 45667777654 66799999999999988776 3799999997 26789999988765 22
Q ss_pred --CCCccEEEEccc
Q 022592 187 --SSSVDVAVFCLS 198 (294)
Q Consensus 187 --~~~fD~Vi~~~~ 198 (294)
..+||.|++...
T Consensus 94 ~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 94 LGIEKVDGILMDLG 107 (301)
T ss_dssp TTCSCEEEEEEECS
T ss_pred cCCCCCCEEEEcCc
Confidence 157999998654
No 285
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.85 E-value=0.0002 Score=62.20 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCcccHHHHHhccc--e-------EEEe--ccC-----CCCcEEE---c-cCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVKNK--V-------FSFD--LVS-----NDPSVIA---C-DMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~~~--v-------~gvD--~s~-----~~~~~~~---~-d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.|+.+|||+||++|.|++.++.. | +|+| +.+ ..+.++. + |+..++ ...+|+|+|..+-
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMAP 149 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCDIGE 149 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEECCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeCCCC
Confidence 57889999999999999998743 3 3445 222 1334444 5 887743 4579999987654
Q ss_pred cCC----CHH---HHHHHHHHhcCcCc-EEEEEeec
Q 022592 200 MGI----NFP---NYLQEAQRVLKPSG-WLLIAEVK 227 (294)
Q Consensus 200 ~~~----~~~---~~l~el~r~LkpgG-~l~i~e~~ 227 (294)
..- |-. .+|.-+.++|+||| .|++=-+.
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 421 211 35666779999999 88885444
No 286
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.84 E-value=0.00014 Score=64.33 Aligned_cols=82 Identities=13% Similarity=0.179 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC-------------C-CcEEEc-cCCCCCCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN-------------D-PSVIAC-DMSNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~-------------~-~~~~~~-d~~~lp~~~~~fD~Vi~~~~l 199 (294)
.++..||||||++|.++..++ ..|+|+|+... + +.+..+ |+..++. ..+|+|+|.-.
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig- 169 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG- 169 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-
Confidence 466799999999999999776 37999999875 2 234444 7766654 56999999877
Q ss_pred cC-CCHH-------HHHHHHHHhcCcC-cEEEEE
Q 022592 200 MG-INFP-------NYLQEAQRVLKPS-GWLLIA 224 (294)
Q Consensus 200 ~~-~~~~-------~~l~el~r~Lkpg-G~l~i~ 224 (294)
+- .++. .+|.-+.++|++| |-++|=
T Consensus 170 eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 170 ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 43 3321 3666678999999 877773
No 287
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.84 E-value=4.3e-05 Score=68.15 Aligned_cols=126 Identities=12% Similarity=0.163 Sum_probs=83.6
Q ss_pred CCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------------------CCCcEEEccCCC-CCCCCCCccEEE
Q 022592 141 PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------------------NDPSVIACDMSN-TPLNSSSVDVAV 194 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------------------~~~~~~~~d~~~-lp~~~~~fD~Vi 194 (294)
...+||=||.|.|..+..+. .+|+.||+.+ ++++++.+|... +.-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 44699999999999998886 3788999876 467889999876 344567899999
Q ss_pred EcccccC-----CCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEe------ccCCeE
Q 022592 195 FCLSLMG-----INFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKD------FSNKMF 263 (294)
Q Consensus 195 ~~~~l~~-----~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~------~~~~~f 263 (294)
....-.. .--..+++.+.++|+|||+++.-.-...+.. -....+.+.+.+. |..+... +....+
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~----~~~~~~~~~l~~~-F~~v~~~~~~vPty~~g~w 237 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ----EEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCC----HHHHHHHHHHHHH-CSEEEEEEECCTTSSSSCE
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccCh----HHHHHHHHHHHhh-CCceeeeeeeeccCCCcce
Confidence 7644221 1235799999999999999988432222221 0122334445554 6555522 123556
Q ss_pred EEEEEEEC
Q 022592 264 IMFYFKKK 271 (294)
Q Consensus 264 ~~i~~~k~ 271 (294)
.++.+.+.
T Consensus 238 ~f~~as~~ 245 (294)
T 3o4f_A 238 TFAWATDN 245 (294)
T ss_dssp EEEEEESC
T ss_pred eheeEECC
Confidence 77777664
No 288
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.76 E-value=4.8e-05 Score=75.93 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=60.3
Q ss_pred CCCEEEEEcCcccHHHHHhc-----------------------------------------------cceEEEeccC---
Q 022592 141 PSLVIADFGCGDARLAKSVK-----------------------------------------------NKVFSFDLVS--- 170 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-----------------------------------------------~~v~gvD~s~--- 170 (294)
++..|||.+||+|.++..++ ..++|+|+++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 56789999999999876543 2589999998
Q ss_pred -------------CCCcEEEccCCCC--CCCCCCccEEEEcccccC-C----CHHHHHH---HHHHhcCcCcEEEEE
Q 022592 171 -------------NDPSVIACDMSNT--PLNSSSVDVAVFCLSLMG-I----NFPNYLQ---EAQRVLKPSGWLLIA 224 (294)
Q Consensus 171 -------------~~~~~~~~d~~~l--p~~~~~fD~Vi~~~~l~~-~----~~~~~l~---el~r~LkpgG~l~i~ 224 (294)
..+.+..+|+.++ |...++||+|+++..+.. . +...+.+ ++.+.+.|||.+++.
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 2368899999876 333448999999866543 1 2333444 444555689999986
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.55 E-value=0.0002 Score=71.67 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=69.9
Q ss_pred CCCEEEEEcCcccHHHHHhc--------cceEEEeccCCCC---------------------cEEEccCCCC-CCCCCCc
Q 022592 141 PSLVIADFGCGDARLAKSVK--------NKVFSFDLVSNDP---------------------SVIACDMSNT-PLNSSSV 190 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~--------~~v~gvD~s~~~~---------------------~~~~~d~~~l-p~~~~~f 190 (294)
++.+|||.|||+|.++..++ ..++|+|+++..+ .+...|+... +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 46799999999999888765 2589999987311 2333344332 2335689
Q ss_pred cEEEEcccccC--CC----------------------------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHH
Q 022592 191 DVAVFCLSLMG--IN----------------------------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPN 240 (294)
Q Consensus 191 D~Vi~~~~l~~--~~----------------------------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~ 240 (294)
|+|+++..+.. .. ...++..+.++|+|||++.++-..+...... -...
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg--~~~k 478 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQG--NESK 478 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCS--HHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCC--hHHH
Confidence 99999877632 10 2246888999999999999986554432100 0135
Q ss_pred HHHHHHHHCC
Q 022592 241 KFSKAVCDLG 250 (294)
Q Consensus 241 ~~~~~l~~~G 250 (294)
.+.+.|-+.+
T Consensus 479 kLRk~LLe~~ 488 (878)
T 3s1s_A 479 AFREFLVGNF 488 (878)
T ss_dssp HHHHHHTTTT
T ss_pred HHHHHHHhCC
Confidence 6766665543
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.49 E-value=0.0003 Score=62.43 Aligned_cols=117 Identities=9% Similarity=0.042 Sum_probs=78.5
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc----------cceEEEeccC-------------------------------
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK----------NKVFSFDLVS------------------------------- 170 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~----------~~v~gvD~s~------------------------------- 170 (294)
++..+........|||+|+..|..+..++ .+++++|...
T Consensus 97 l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ 176 (282)
T 2wk1_A 97 CVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEE 176 (282)
T ss_dssp HHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHH
T ss_pred HHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHH
Confidence 44444433344599999999999776553 3689999531
Q ss_pred ------------CCCcEEEccCCC-CC-CCCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCC
Q 022592 171 ------------NDPSVIACDMSN-TP-LNSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGG 236 (294)
Q Consensus 171 ------------~~~~~~~~d~~~-lp-~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~ 236 (294)
+++.++.+|+.+ +| ++.++||+|+.-... +.....++..+...|+|||++++-++. .+ + +
T Consensus 177 ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD~~-~~-~---G 250 (282)
T 2wk1_A 177 VRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIVDDYM-MC-P---P 250 (282)
T ss_dssp HHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEESSCT-TC-H---H
T ss_pred HHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEEcCCC-CC-H---H
Confidence 356788887754 43 345789999987642 223457899999999999999886652 11 1 1
Q ss_pred CCHHHHHHHHHHCCCeEEE
Q 022592 237 ADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~ 255 (294)
....+.+.++..|+.+.-
T Consensus 251 -~~~Av~Ef~~~~~i~~~i 268 (282)
T 2wk1_A 251 -CKDAVDEYRAKFDIADEL 268 (282)
T ss_dssp -HHHHHHHHHHHTTCCSCC
T ss_pred -HHHHHHHHHHhcCCceEE
Confidence 235677778888876543
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.45 E-value=0.0022 Score=56.79 Aligned_cols=115 Identities=11% Similarity=0.156 Sum_probs=75.3
Q ss_pred HHHHHHhhcc----CCCCEEEEEcC------cccHHH-HHh-cc--ceEEEeccC---CCCcEEEccCCCCCCCCCCccE
Q 022592 130 NIIVKWLKDH----SPSLVIADFGC------GDARLA-KSV-KN--KVFSFDLVS---NDPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 130 ~~~~~~l~~~----~~~~~VLDiGc------G~G~~~-~~l-~~--~v~gvD~s~---~~~~~~~~d~~~lp~~~~~fD~ 192 (294)
..++++|... +-+.+|||+|+ -+|.+. ..+ .. .|+++|+.+ ....++.+|+..+.. ...||+
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~-~~k~DL 172 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHT-ANKWDL 172 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEE-SSCEEE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccCCCeEEEcccccccc-CCCCCE
Confidence 4477777542 56789999996 566642 222 22 799999988 222458899866443 477999
Q ss_pred EEEcccccC---C--C-------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 193 AVFCLSLMG---I--N-------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 193 Vi~~~~l~~---~--~-------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|+|-.+-.- . + .+.++.-+.++|+|||.|++=-+..... +.+.++. + -|..+.
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~--------~~L~~lr-k-~F~~VK 237 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--------ADLYKLM-G-HFSWWT 237 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--------HHHHHHH-T-TEEEEE
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH--------HHHHHHH-h-hCCeEE
Confidence 998655432 1 1 2456666788999999999965544331 4455544 3 687666
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.35 E-value=5.6e-05 Score=70.57 Aligned_cols=59 Identities=12% Similarity=0.062 Sum_probs=46.0
Q ss_pred CCCEEEEEcCcccHHHHHhc---cceEEEeccC------------C-----CCcEEEccCCCC-CC-CCCCccEEEEccc
Q 022592 141 PSLVIADFGCGDARLAKSVK---NKVFSFDLVS------------N-----DPSVIACDMSNT-PL-NSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~------------~-----~~~~~~~d~~~l-p~-~~~~fD~Vi~~~~ 198 (294)
++.+|||+|||+|..+..++ ..|+|+|+++ . ++.++++|+... +. ++++||+|++...
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 36799999999999988887 4799999987 1 367889998774 32 2457999998644
Q ss_pred c
Q 022592 199 L 199 (294)
Q Consensus 199 l 199 (294)
.
T Consensus 173 r 173 (410)
T 3ll7_A 173 R 173 (410)
T ss_dssp E
T ss_pred C
Confidence 3
No 293
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.34 E-value=0.00056 Score=61.21 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=75.1
Q ss_pred CCCEEEEEcCcccHHHHH-hc--------c--ceEEEeccC---------------------------C--CCcEEEccC
Q 022592 141 PSLVIADFGCGDARLAKS-VK--------N--KVFSFDLVS---------------------------N--DPSVIACDM 180 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~-l~--------~--~v~gvD~s~---------------------------~--~~~~~~~d~ 180 (294)
+..+|||+|-|+|..... +. . +++++|..+ . ...+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345899999999985432 21 1 456666422 0 123455666
Q ss_pred CC-CC-CCCCCccEEEEcccccCCCH----HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 181 SN-TP-LNSSSVDVAVFCLSLMGINF----PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 181 ~~-lp-~~~~~fD~Vi~~~~l~~~~~----~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
.. ++ +.+..||+|+...---..+| ..+++.++++++|||.|.-.. ....+...|.++||.+.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt------------aag~VRR~L~~aGF~V~ 243 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS------------SSLSVRKSLLTLGFKVG 243 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC------------CCHHHHHHHHHTTCEEE
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe------------CcHHHHHHHHHCCCEEE
Confidence 43 33 34457999887542222344 489999999999999887632 34788999999999998
Q ss_pred EEeccCCeEEEEEEEE
Q 022592 255 SKDFSNKMFIMFYFKK 270 (294)
Q Consensus 255 ~~~~~~~~f~~i~~~k 270 (294)
...-....-.++.+..
T Consensus 244 k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 244 SSREIGRKRKGTVASL 259 (308)
T ss_dssp EEECC---CEEEEEES
T ss_pred ecCCCCCCCceeEEec
Confidence 8654333334555544
No 294
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.33 E-value=0.00075 Score=56.83 Aligned_cols=79 Identities=18% Similarity=0.176 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccC------------C------CCcEEEccCCCC---------------
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVS------------N------DPSVIACDMSNT--------------- 183 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~------------~------~~~~~~~d~~~l--------------- 183 (294)
...+|||||||. -+..++ .+|+.+|.++ . ++.++.+|+...
T Consensus 30 ~a~~VLEiGtGy--STl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGSGG--STVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESCSH--HHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECchH--HHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 346999999964 333332 5899999876 1 367888886532
Q ss_pred C--------C-CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 184 P--------L-NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 184 p--------~-~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+ . ..++||+|+..... ....+..+.+.|+|||.+++-+
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS----HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC----chhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 23689999987642 2467777889999999996644
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.28 E-value=0.00041 Score=63.63 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=64.2
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccCC---------------------CCcEEEccCCCCC-
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVSN---------------------DPSVIACDMSNTP- 184 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~~---------------------~~~~~~~d~~~lp- 184 (294)
+...+....++.+|||+++|+|.=+..++ ..++++|++.. ++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 34444444478899999999998666554 37999999871 3445566665543
Q ss_pred CCCCCccEEEEccc-------ccC--CC----------------HHHHHHHHHHhcCcCcEEEEEee
Q 022592 185 LNSSSVDVAVFCLS-------LMG--IN----------------FPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 185 ~~~~~fD~Vi~~~~-------l~~--~~----------------~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+.||.|++... ... .+ -...|..+.++|||||.|+.+.-
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 34578999995321 111 11 12578888999999999999864
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.21 E-value=9.7e-05 Score=82.95 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=57.8
Q ss_pred HHHHhhcc--CCCCEEEEEcCcccHHHHHhc----------cceEEEeccCCCC-----cE-----EE--ccCCC-CCCC
Q 022592 132 IVKWLKDH--SPSLVIADFGCGDARLAKSVK----------NKVFSFDLVSNDP-----SV-----IA--CDMSN-TPLN 186 (294)
Q Consensus 132 ~~~~l~~~--~~~~~VLDiGcG~G~~~~~l~----------~~v~gvD~s~~~~-----~~-----~~--~d~~~-lp~~ 186 (294)
+++.+... .+..+||+||.|+|..+..+. ..++..|+|+.-. .| .. .|... .++.
T Consensus 1229 ~~~~~~~~~~~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~ 1308 (2512)
T 2vz8_A 1229 CVDTALENMASPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGS 1308 (2512)
T ss_dssp HHHHHHTTSSSSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC--
T ss_pred HHHHHHhcCCCCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCC
Confidence 44444443 346799999999997544321 2567788886322 11 11 12222 1334
Q ss_pred CCCccEEEEcccccCC-CHHHHHHHHHHhcCcCcEEEEEeecCC---------CCC----CCCCCCHHHHHHHHHHCCCe
Q 022592 187 SSSVDVAVFCLSLMGI-NFPNYLQEAQRVLKPSGWLLIAEVKSR---------FDP----NTGGADPNKFSKAVCDLGFA 252 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~~-~~~~~l~el~r~LkpgG~l~i~e~~~~---------~~~----~~~~~~~~~~~~~l~~~Gf~ 252 (294)
..+||+||++.+||.. +....+..+.++|+|||.+++.+.... +.. .....+.++|..+|..+||.
T Consensus 1309 ~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1309 LGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp ---CCEEEEECC--------------------CCEEEEEEC--------------------------CTTTTSSTTTTEE
T ss_pred CCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCCCc
Confidence 5679999999999864 788899999999999999998764321 000 01123445666778889998
Q ss_pred EEEE
Q 022592 253 PVSK 256 (294)
Q Consensus 253 ~~~~ 256 (294)
.+..
T Consensus 1389 ~~~~ 1392 (2512)
T 2vz8_A 1389 LVAL 1392 (2512)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8764
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.21 E-value=0.0011 Score=63.85 Aligned_cols=122 Identities=17% Similarity=0.178 Sum_probs=79.1
Q ss_pred CCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------------------cceEEEeccC---------------C
Q 022592 125 PELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------------------NKVFSFDLVS---------------N 171 (294)
Q Consensus 125 ~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------------------~~v~gvD~s~---------------~ 171 (294)
|...++.+++.+... ++.+|+|-+||+|.++..+. ..++|+|+.+ .
T Consensus 202 P~~Vv~lmv~l~~p~-~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 202 PRPVVRFMVEVMDPQ-LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CHHHHHHHHHHHCCC-TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred cHHHHHHHHHhhccC-CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 445566677766554 66799999999999876543 2589999887 2
Q ss_pred CCcEEEccCCCCCCC----CCCccEEEEcccccCC----------------C-HHHHHHHHHHhcC-------cCcEEEE
Q 022592 172 DPSVIACDMSNTPLN----SSSVDVAVFCLSLMGI----------------N-FPNYLQEAQRVLK-------PSGWLLI 223 (294)
Q Consensus 172 ~~~~~~~d~~~lp~~----~~~fD~Vi~~~~l~~~----------------~-~~~~l~el~r~Lk-------pgG~l~i 223 (294)
...+..+|....|.. ...||+|+++..+... + -..++..+.+.|+ |||++.+
T Consensus 281 ~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~av 360 (530)
T 3ufb_A 281 YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAV 360 (530)
T ss_dssp CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEE
T ss_pred cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEE
Confidence 345667776654432 3479999998877421 0 1257788888887 7999999
Q ss_pred EeecCCCCCCCCCCCHHHHHHHHHHCC
Q 022592 224 AEVKSRFDPNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 224 ~e~~~~~~~~~~~~~~~~~~~~l~~~G 250 (294)
+-..+..... -....+.+.|-+.+
T Consensus 361 VlP~g~Lf~~---~~~~~iRk~Lle~~ 384 (530)
T 3ufb_A 361 VVPNGTLFSD---GISARIKEELLKNF 384 (530)
T ss_dssp EEEHHHHHCC---THHHHHHHHHHHHS
T ss_pred Eecchhhhcc---chHHHHHHHHhhcC
Confidence 8655432211 01245665554443
No 298
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.85 E-value=0.00067 Score=62.41 Aligned_cols=105 Identities=13% Similarity=0.078 Sum_probs=67.1
Q ss_pred CCCEEEEEcCcccHHHHHhc----cceEEEeccCC-----------------------CCcEEEccCCCC----CCCCCC
Q 022592 141 PSLVIADFGCGDARLAKSVK----NKVFSFDLVSN-----------------------DPSVIACDMSNT----PLNSSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~-----------------------~~~~~~~d~~~l----p~~~~~ 189 (294)
+..+||=||.|.|..+..+. .+|+.||+.+. +++++.+|.... +-..+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 34699999999999998886 37889998861 245556665431 112457
Q ss_pred ccEEEEcccccC--CC---------HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCC
Q 022592 190 VDVAVFCLSLMG--IN---------FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLG 250 (294)
Q Consensus 190 fD~Vi~~~~l~~--~~---------~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~G 250 (294)
||+|+....-.. .+ -..+++.+.++|+|||+++.-. .+.+.. -....+.+.+++..
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~-~s~~~~----~~~~~i~~tl~~vF 351 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG-NCVNLT----EALSLYEEQLGRLY 351 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE-EETTCH----HHHHHHHHHHTTSS
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec-CCCcch----hHHHHHHHHHHHhC
Confidence 999998643221 11 1467889999999999988632 111110 02245566677663
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.66 E-value=0.0021 Score=56.80 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=51.9
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-----------CCCcEEEccCCCCC-----CCCCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTP-----LNSSS 189 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp-----~~~~~ 189 (294)
++.+++.+... ++..+||.+||.|.++..++ ..|+|+|.++ .++.++.+++.+++ ...++
T Consensus 11 l~e~le~L~~~-~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~ 89 (285)
T 1wg8_A 11 YQEALDLLAVR-PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVER 89 (285)
T ss_dssp HHHHHHHHTCC-TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSC
T ss_pred HHHHHHhhCCC-CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCC
Confidence 46677777655 67799999999999999887 4899999987 35677888877653 12256
Q ss_pred ccEEEEccc
Q 022592 190 VDVAVFCLS 198 (294)
Q Consensus 190 fD~Vi~~~~ 198 (294)
+|.|++...
T Consensus 90 vDgIL~DLG 98 (285)
T 1wg8_A 90 VDGILADLG 98 (285)
T ss_dssp EEEEEEECS
T ss_pred cCEEEeCCc
Confidence 888886544
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.58 E-value=0.008 Score=53.33 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=31.4
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN 171 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~ 171 (294)
+..++..+. .++..|||++||+|..+..++ ..++|+|+++.
T Consensus 225 ~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~ 268 (297)
T 2zig_A 225 AERLVRMFS--FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPR 268 (297)
T ss_dssp HHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHH
T ss_pred HHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHH
Confidence 344444443 367899999999999888776 58999999873
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.76 E-value=0.068 Score=49.09 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=68.7
Q ss_pred CEEEEEcCcccHHHHHhc----cceEEEeccC----------CCCcEEEccCCCCCC--------CCCCccEEEEccccc
Q 022592 143 LVIADFGCGDARLAKSVK----NKVFSFDLVS----------NDPSVIACDMSNTPL--------NSSSVDVAVFCLSLM 200 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~----~~v~gvD~s~----------~~~~~~~~d~~~lp~--------~~~~fD~Vi~~~~l~ 200 (294)
.++||+-||.|.++..+. ..+.++|+.+ ....++.+|+..+.. ....+|+|+...--.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 579999999999887775 3678999987 356678889887631 235799999765543
Q ss_pred CC---------C-HHHHHH---HHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 201 GI---------N-FPNYLQ---EAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 201 ~~---------~-~~~~l~---el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
.+ | ...++. ++...++| .+++.|=...+...........+. .|++.||.+
T Consensus 83 ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 83 GFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp TTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred CcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 32 1 112333 34455677 455555433332211112345667 899999988
No 302
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.39 E-value=0.21 Score=45.03 Aligned_cols=111 Identities=10% Similarity=0.132 Sum_probs=73.5
Q ss_pred CCCEEEEEcCcccHHHHHhc---c--ceEEEeccC-----------------------------------CCCcEEEccC
Q 022592 141 PSLVIADFGCGDARLAKSVK---N--KVFSFDLVS-----------------------------------NDPSVIACDM 180 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---~--~v~gvD~s~-----------------------------------~~~~~~~~d~ 180 (294)
+...|+.+|||.......+. . .++-+|... .+..++.+|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 45689999999998776664 2 455666422 3456788888
Q ss_pred CCCCC---------CCCCccEEEEcccccCCCHH---HHHHHHHHhcCcCcEEEEEeecCC------C------------
Q 022592 181 SNTPL---------NSSSVDVAVFCLSLMGINFP---NYLQEAQRVLKPSGWLLIAEVKSR------F------------ 230 (294)
Q Consensus 181 ~~lp~---------~~~~fD~Vi~~~~l~~~~~~---~~l~el~r~LkpgG~l~i~e~~~~------~------------ 230 (294)
.+... ......++++-.+|++.++. .+++.+...+ |+|.+++.|.... +
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~r 255 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKESR 255 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhccc
Confidence 77321 22457888999999987554 6666677765 7888877764322 0
Q ss_pred CCC----CCCCCHHHHHHHHHHCCCe
Q 022592 231 DPN----TGGADPNKFSKAVCDLGFA 252 (294)
Q Consensus 231 ~~~----~~~~~~~~~~~~l~~~Gf~ 252 (294)
... ....+++...+.|.++||.
T Consensus 256 g~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 256 NLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCcccccccCCCHHHHHHHHHHCCCC
Confidence 000 1124777888888888986
No 303
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.22 E-value=0.45 Score=42.25 Aligned_cols=111 Identities=11% Similarity=0.092 Sum_probs=70.8
Q ss_pred CEEEEEcCcccHHHHHhc----cceEEEeccCC---------CCcEEEccCCCCCCC-CCCccEEEEcccccC-------
Q 022592 143 LVIADFGCGDARLAKSVK----NKVFSFDLVSN---------DPSVIACDMSNTPLN-SSSVDVAVFCLSLMG------- 201 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~---------~~~~~~~d~~~lp~~-~~~fD~Vi~~~~l~~------- 201 (294)
++|||+=||-|.+...+. ..+.++|+.+. ...++.+|+.++... -..+|+++...--..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 479999999998877664 36789999883 335778898876422 235899886543321
Q ss_pred ---CCHH-HHHH---HHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 202 ---INFP-NYLQ---EAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 202 ---~~~~-~~l~---el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.|.. .++. ++.+.++|. +++.|=...+...........+...|++.||.+..
T Consensus 81 ~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 139 (331)
T 3ubt_Y 81 RGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHI 139 (331)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEE
T ss_pred cCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccccccccchhhhhhhhhccCCcEEEE
Confidence 1322 3333 344556883 55555444333333333567788899999998876
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.13 E-value=0.17 Score=45.41 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=67.2
Q ss_pred CCEEEEEcCcccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCCCC-CCCccEEEEcccccCC------
Q 022592 142 SLVIADFGCGDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTPLN-SSSVDVAVFCLSLMGI------ 202 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp~~-~~~fD~Vi~~~~l~~~------ 202 (294)
..++||+.||.|.+...+. ..++++|+.+.. .....+|+..+... -..+|+|+...-...+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~~ 90 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQ 90 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCTTTCTTSCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCCCcchhccc
Confidence 4689999999999887775 368889988721 01126777765321 1258999976544321
Q ss_pred ----CHH----HHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 203 ----NFP----NYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 203 ----~~~----~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|.. ..+.++.+.++|. +++.|=...+.....+...+.+...|++.||.+..
T Consensus 91 ~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 91 KGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 211 2233344556784 55555333322211222456788899999998766
No 305
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.07 E-value=0.065 Score=46.60 Aligned_cols=71 Identities=13% Similarity=-0.012 Sum_probs=44.9
Q ss_pred CCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCe
Q 022592 187 SSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKM 262 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 262 (294)
..+||+|..-.-. +.+....+..+...|+|||++++-++... ..++ -...+.+.+.+.|..+.........
T Consensus 180 ~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~~~---~w~G-~~~A~~ef~~~~~~~i~~~p~~~~~ 250 (257)
T 3tos_A 180 QTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELDNP---KWPG-ENIAMRKVLGLDHAPLRLLPGRPAP 250 (257)
T ss_dssp TCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTTCT---TCTH-HHHHHHHHTCTTSSCCEECTTCSCC
T ss_pred CCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCCCC---CChH-HHHHHHHHHhhCCCeEEEccCCCCC
Confidence 3457887766532 12345678889999999999999665321 1111 2245677778888877775554433
No 306
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.97 E-value=0.04 Score=49.47 Aligned_cols=84 Identities=12% Similarity=0.159 Sum_probs=54.1
Q ss_pred CCCcEEEccCCC-CC-CCCCCccEEEEcccccCC---------------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCC
Q 022592 171 NDPSVIACDMSN-TP-LNSSSVDVAVFCLSLMGI---------------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPN 233 (294)
Q Consensus 171 ~~~~~~~~d~~~-lp-~~~~~fD~Vi~~~~l~~~---------------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~ 233 (294)
....++.+|... +. +++++||+|++..-.... .....+.++.++|+|||.+++.- ...+...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~-~d~~~~g 91 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF-GGAYMKG 91 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-CCCEETT
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE-CCEecCC
Confidence 455677888754 33 567899999988665321 24578899999999999998852 1111000
Q ss_pred ---CCCCCHHHHHHHHHHCCCeEEE
Q 022592 234 ---TGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 234 ---~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
...+....+..+++.+||....
T Consensus 92 ~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 92 VPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred CcccccchHHHHHHHHHhCCCEEEE
Confidence 0011234566778899997654
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.81 E-value=0.034 Score=50.25 Aligned_cols=70 Identities=16% Similarity=0.159 Sum_probs=51.7
Q ss_pred HHHHHHHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC-----------CCCcEEEccCCCCC--CC---
Q 022592 129 VNIIVKWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS-----------NDPSVIACDMSNTP--LN--- 186 (294)
Q Consensus 129 ~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~-----------~~~~~~~~d~~~lp--~~--- 186 (294)
++.+++.|... ++..++|..||.|..+..++ .+|+|+|..+ .++.++.+++.++. ++
T Consensus 46 l~Evl~~L~i~-pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 46 LDEAVNGLNIR-PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp THHHHHHTCCC-TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhCCC-CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcC
Confidence 46677777655 67899999999999988775 3799999886 35677888776643 11
Q ss_pred -CCCccEEEEcccc
Q 022592 187 -SSSVDVAVFCLSL 199 (294)
Q Consensus 187 -~~~fD~Vi~~~~l 199 (294)
.+++|.|++...+
T Consensus 125 ~~~~vDgILfDLGV 138 (347)
T 3tka_A 125 LIGKIDGILLDLGV 138 (347)
T ss_dssp CTTCEEEEEEECSC
T ss_pred CCCcccEEEECCcc
Confidence 1368999876655
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=93.73 E-value=0.21 Score=45.07 Aligned_cols=108 Identities=14% Similarity=0.222 Sum_probs=65.9
Q ss_pred CEEEEEcCcccHHHHHhc--c----ceEEEeccC----------CCCcEEEccCCCCCC---CCCCccEEEEcccccCC-
Q 022592 143 LVIADFGCGDARLAKSVK--N----KVFSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFCLSLMGI- 202 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~--~----~v~gvD~s~----------~~~~~~~~d~~~lp~---~~~~fD~Vi~~~~l~~~- 202 (294)
.+|||+-||.|.+...+. . .|+++|+.+ ....++.+|+..+.. +...+|+|+...--..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 479999999999887664 2 588999987 345578889887642 11258999986553321
Q ss_pred ---------CHH-HHHHHHH---HhcC--cCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 203 ---------NFP-NYLQEAQ---RVLK--PSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 203 ---------~~~-~~l~el~---r~Lk--pgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
|.. .++.++. +.++ |. +++.|-...+.. ..+...+.+.|++.||.+..
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~~---~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFEV---SSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp -------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGGG---SHHHHHHHHHHHHTTEEEEE
T ss_pred hcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCccccC---HHHHHHHHHHHHHCCCeeEE
Confidence 111 2333333 4445 53 444442222211 12456788899999998876
No 309
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.59 E-value=0.08 Score=46.76 Aligned_cols=84 Identities=18% Similarity=0.194 Sum_probs=52.3
Q ss_pred CCcEEEccCCC-CC-CCCCCccEEEEcccccCC-C--------------------HHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 172 DPSVIACDMSN-TP-LNSSSVDVAVFCLSLMGI-N--------------------FPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 172 ~~~~~~~d~~~-lp-~~~~~fD~Vi~~~~l~~~-~--------------------~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
...++++|+.+ ++ +++++||+|+++.-.... + ...++.++.++|+|||.+++.--..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 45677888765 22 557889999988766421 0 2356789999999999998852110
Q ss_pred CCCCC-CC---CCC-HHHHHHHHHHCCCeEEE
Q 022592 229 RFDPN-TG---GAD-PNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 229 ~~~~~-~~---~~~-~~~~~~~l~~~Gf~~~~ 255 (294)
..... .. .+. ...+..+++++||....
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 00000 00 011 24677889999997765
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.61 E-value=0.092 Score=45.40 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=31.6
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS 170 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~ 170 (294)
..++.++.... .++..|||..||+|..+..+. .+++|+|+++
T Consensus 200 ~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~ 244 (260)
T 1g60_A 200 DLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNA 244 (260)
T ss_dssp HHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCH
T ss_pred HHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCH
Confidence 33444555443 467899999999999887765 5899999886
No 311
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=92.33 E-value=0.14 Score=46.49 Aligned_cols=56 Identities=14% Similarity=0.002 Sum_probs=42.2
Q ss_pred HHHHHHHHhhccC-----CCCEEEEEcCcccHHHHHhc-----cceEEEeccC------------CCCcEEEccCCCC
Q 022592 128 PVNIIVKWLKDHS-----PSLVIADFGCGDARLAKSVK-----NKVFSFDLVS------------NDPSVIACDMSNT 183 (294)
Q Consensus 128 ~~~~~~~~l~~~~-----~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~------------~~~~~~~~d~~~l 183 (294)
.++.+++.+.... ++..|||||.|.|.++..|. .+|+++++.. .++.++.+|+..+
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 3455666665432 35789999999999999886 2799999775 4788999998654
No 312
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.78 E-value=0.52 Score=46.45 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=43.3
Q ss_pred CCCccEEEEcccccCCCH----HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEec
Q 022592 187 SSSVDVAVFCLSLMGINF----PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDF 258 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~~~~----~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 258 (294)
...+|+++....--..++ ..++..+.++++|||.+.... ....+...|.++||.+.....
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------------~~~~vr~~l~~aGf~~~~~~~ 232 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------------AAGFVRRGLQQAGFNVTKVKG 232 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC------------CCHHHHHHHHHTTCEEEEEEC
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc------------CcHHHHHHHHhCCeEEEeccC
Confidence 467999887543222222 588999999999999876532 226889999999999887553
No 313
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.67 E-value=0.53 Score=46.26 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=48.2
Q ss_pred CCCccEEEEcccccCCCH----HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCe
Q 022592 187 SSSVDVAVFCLSLMGINF----PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKM 262 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~~~~----~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 262 (294)
...||+++...---..++ ..++..++++++|||.+.... ....+...|.++||.+.........
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------------~~~~vr~~L~~aGf~v~~~~~~g~k 244 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------------SAGFVRRGLQDAGFTMQKRKGFGRK 244 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC------------CCHHHHHHHHHHTCEEEEEECSTTC
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc------------CcHHHHHHHHhCCeEEEeccccccc
Confidence 357999887542222233 478999999999999877532 2268899999999998875533333
Q ss_pred EEEEEEEE
Q 022592 263 FIMFYFKK 270 (294)
Q Consensus 263 f~~i~~~k 270 (294)
..++...+
T Consensus 245 rem~~~~~ 252 (676)
T 3ps9_A 245 REMLCGVM 252 (676)
T ss_dssp CEEEEEEC
T ss_pred hhhhheec
Confidence 33444433
No 314
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.55 E-value=0.96 Score=40.51 Aligned_cols=111 Identities=11% Similarity=0.082 Sum_probs=69.5
Q ss_pred CCEEEEEcCcccHHHHHhc--c----ce-EEEeccC----------CCCcEEEccCCCCCC---CCCCccEEEEcccccC
Q 022592 142 SLVIADFGCGDARLAKSVK--N----KV-FSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFCLSLMG 201 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~--~----~v-~gvD~s~----------~~~~~~~~d~~~lp~---~~~~fD~Vi~~~~l~~ 201 (294)
..+++|+-||.|.+...+. . .+ .++|+.+ ... ++.+|+.++.. +...+|+++....-..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 4589999999999877664 2 35 6999987 122 56778877642 2235899996543221
Q ss_pred C------------CHH-HHHHHHHH-hcCc---CcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 202 I------------NFP-NYLQEAQR-VLKP---SGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 202 ~------------~~~-~~l~el~r-~Lkp---gG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
+ |.. ..+.++.+ +++. .-.+++.|=...+.. ....+.+.+.|++.||.+...
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~---~~~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE---SLVFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG---SHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC---hHHHHHHHHHHHhCCCEEEEE
Confidence 1 332 45666666 5532 135566553333221 124577889999999988763
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.40 E-value=0.29 Score=44.84 Aligned_cols=85 Identities=20% Similarity=0.168 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCC--------CCcEEEccCCCCCC---------CCCCccEEEEc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSN--------DPSVIACDMSNTPL---------NSSSVDVAVFC 196 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~--------~~~~~~~d~~~lp~---------~~~~fD~Vi~~ 196 (294)
.++.+||-+|||. |.++..++ . +|+++|.++. ...++ |.....+ ....+|+|+-+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDCGVDA 261 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 4778999999976 66666554 3 7999998862 22222 3222111 12259999876
Q ss_pred cccc---------CCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 197 LSLM---------GINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 197 ~~l~---------~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
..-. |.++...+..+.++|++||.++++..
T Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 262 VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 5432 12234578899999999999987643
No 316
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=90.05 E-value=0.22 Score=43.74 Aligned_cols=116 Identities=9% Similarity=0.017 Sum_probs=75.1
Q ss_pred HHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccC-------------CCCcEEEccCCC-CC---CCCCCc
Q 022592 131 IIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVS-------------NDPSVIACDMSN-TP---LNSSSV 190 (294)
Q Consensus 131 ~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~-lp---~~~~~f 190 (294)
.+++.+... .+..+||+=+|||.++..+. .+++.+|.++ .++.++..|... +. -+...|
T Consensus 82 ~yf~~l~~~-n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~f 160 (283)
T 2oo3_A 82 EYISVIKQI-NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKR 160 (283)
T ss_dssp HHHHHHHHH-SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSC
T ss_pred HHHHHHHHh-cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCc
Confidence 344444433 34568999999999999886 3899999887 245667777533 11 223569
Q ss_pred cEEEEcccccC-CCHHHHHHHHHH--hcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 191 DVAVFCLSLMG-INFPNYLQEAQR--VLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 191 D~Vi~~~~l~~-~~~~~~l~el~r--~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
|+|++....+. .+...++..+.+ .+.|+|.+++ |.+... .-..+.+.+.|++.|..+
T Consensus 161 dLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~--WYPi~~----~~~~~~~~~~l~~~~~~~ 220 (283)
T 2oo3_A 161 GLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV--WYPVVN----KAWTEQFLRKMREISSKS 220 (283)
T ss_dssp EEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE--EEEESS----HHHHHHHHHHHHHHCSSE
T ss_pred cEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE--EEeccc----hHHHHHHHHHHHhcCCCe
Confidence 99999888874 466777766665 5678888777 221111 112356667777667633
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=89.75 E-value=2.8 Score=37.54 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=68.4
Q ss_pred CEEEEEcCcccHHHHHhc------cceEEEeccC----------CCCcEEEccCCCCCC---CCCCccEEEEcccccCC-
Q 022592 143 LVIADFGCGDARLAKSVK------NKVFSFDLVS----------NDPSVIACDMSNTPL---NSSSVDVAVFCLSLMGI- 202 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~------~~v~gvD~s~----------~~~~~~~~d~~~lp~---~~~~fD~Vi~~~~l~~~- 202 (294)
.+++|+-||.|.+...+. ..|.++|+.+ ....++.+|+.++.. +...+|+++....-..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 479999999999877664 2477999987 344577788877642 22358999965443321
Q ss_pred ---------CHH-HHHHHHHH---hcC-cCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEE
Q 022592 203 ---------NFP-NYLQEAQR---VLK-PSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSK 256 (294)
Q Consensus 203 ---------~~~-~~l~el~r---~Lk-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 256 (294)
|.. ..+.++.+ .++ | .+++.|=...+... -..+.+.+.|++.||.+...
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~---~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENS---TVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGS---HHHHHHHHHHHHTTEEEEEE
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhh---hHHHHHHHHHHhCCCeEEEE
Confidence 211 23333444 444 5 55666644333211 13578889999999988773
No 318
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.33 E-value=0.63 Score=44.04 Aligned_cols=111 Identities=12% Similarity=0.170 Sum_probs=67.3
Q ss_pred CCEEEEEcCcccHHHHHhc----cceEEEeccC-------------CCCcEEEccCCCCCCC-----------------C
Q 022592 142 SLVIADFGCGDARLAKSVK----NKVFSFDLVS-------------NDPSVIACDMSNTPLN-----------------S 187 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-------------~~~~~~~~d~~~lp~~-----------------~ 187 (294)
..+++|+=||.|.+...+. ..|+++|+.+ +...++.+|+..+... .
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~ 167 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHI 167 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcC
Confidence 3589999999999887775 2578999876 1345677888664311 1
Q ss_pred CCccEEEEcccccCCC-------------------H-HHHHHH---HHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHH
Q 022592 188 SSVDVAVFCLSLMGIN-------------------F-PNYLQE---AQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSK 244 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~-------------------~-~~~l~e---l~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~ 244 (294)
..+|+++....-..++ . ..++.+ +.+.++| .+++.|=...+.....+.....+..
T Consensus 168 ~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rP--k~fvlENV~gl~s~~~g~~f~~i~~ 245 (482)
T 3me5_A 168 PEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP--AMFVLENVKNLKSHDKGKTFRIIMQ 245 (482)
T ss_dssp CCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCC--SEEEEEEETTTTTGGGGHHHHHHHH
T ss_pred CCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCC--cEEEEeCcHHHhcccCCcHHHHHHH
Confidence 3589998655443211 0 012333 3444567 4555553333322222234567888
Q ss_pred HHHHCCCeEE
Q 022592 245 AVCDLGFAPV 254 (294)
Q Consensus 245 ~l~~~Gf~~~ 254 (294)
.|+..||.+.
T Consensus 246 ~L~~lGY~v~ 255 (482)
T 3me5_A 246 TLDELGYDVA 255 (482)
T ss_dssp HHHHTTEEET
T ss_pred HHhcCCcEEE
Confidence 9999999874
No 319
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.20 E-value=0.61 Score=37.22 Aligned_cols=91 Identities=12% Similarity=0.169 Sum_probs=54.1
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-----cceEEEeccC--------CCCcEEEccCCC-CCCC----CCCccEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-----NKVFSFDLVS--------NDPSVIACDMSN-TPLN----SSSVDVA 193 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-----~~v~gvD~s~--------~~~~~~~~d~~~-lp~~----~~~fD~V 193 (294)
++..+... ..-|||+|-|+|+.--.|. ..++++|-.- +.-.++.+|+.+ +|.. ....-++
T Consensus 33 a~~~v~~~--~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~La 110 (174)
T 3iht_A 33 AIAQTAGL--SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLV 110 (174)
T ss_dssp HHHHTTTC--CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEE
T ss_pred HHHHhcCC--CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEE
Confidence 44444433 3479999999998666554 4788888543 455788888865 3321 2333444
Q ss_pred EEcccccCCCHH-----HHHHHHHHhcCcCcEEEEE
Q 022592 194 VFCLSLMGINFP-----NYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 194 i~~~~l~~~~~~-----~~l~el~r~LkpgG~l~i~ 224 (294)
.+....+..+.. .+-.-+..+|.|||+++-.
T Consensus 111 HaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 111 HADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 443333332111 2223456789999988774
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=87.93 E-value=0.94 Score=40.85 Aligned_cols=82 Identities=17% Similarity=0.280 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCC--------c-EEEccCCCC-----CCCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDP--------S-VIACDMSNT-----PLNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~--------~-~~~~d~~~l-----p~~~~~fD~Vi~~~~l 199 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+. . ++..+-.++ ....+.+|+|+-+..
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g- 267 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG- 267 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCC-
Confidence 4678999999875 66665554 3 589999877321 1 221111111 011236999886543
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
....+..+.++|++||.++++..
T Consensus 268 ----~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 268 ----SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp ----CHHHHHHHHHTEEEEEEEEECCC
T ss_pred ----CHHHHHHHHHHHhcCCEEEEeCC
Confidence 24678899999999999988654
No 321
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.92 E-value=0.76 Score=39.49 Aligned_cols=73 Identities=12% Similarity=0.053 Sum_probs=46.7
Q ss_pred cEEEccCCCC--CCCCCCccEEEEcccccCC---------------CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCC
Q 022592 174 SVIACDMSNT--PLNSSSVDVAVFCLSLMGI---------------NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGG 236 (294)
Q Consensus 174 ~~~~~d~~~l--p~~~~~fD~Vi~~~~l~~~---------------~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~ 236 (294)
.++++|+... .+++++||+|++..-..-. -....+.++.++|+|||.+++.- . .
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~-~-d------- 76 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN-T-P------- 76 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE-C-H-------
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc-C-c-------
Confidence 4566665431 1346788888876654321 12467888999999999998852 1 1
Q ss_pred CCHHHHHHHHHHCCCeEEE
Q 022592 237 ADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~ 255 (294)
+....+..++.+.||....
T Consensus 77 ~~~~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 77 FNCAFICQYLVSKGMIFQN 95 (260)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhhccceeE
Confidence 1124566678889997654
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.37 E-value=0.86 Score=41.54 Aligned_cols=85 Identities=21% Similarity=0.183 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCC--------CcEEEccCCCCC--------C-CCCCccEEEEc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSND--------PSVIACDMSNTP--------L-NSSSVDVAVFC 196 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~--------~~~~~~d~~~lp--------~-~~~~fD~Vi~~ 196 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+ ...+ |..... . ....+|+|+-+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~~~t~g~g~Dvvid~ 261 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLGEPEVDCAVDA 261 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 4678999999865 66665554 3 68999988732 2222 222111 0 12359999876
Q ss_pred ccc----------cCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 197 LSL----------MGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 197 ~~l----------~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
..- ++.++...+..+.++|++||.++++..
T Consensus 262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 262 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 542 234556688999999999999988653
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.10 E-value=0.72 Score=41.24 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCc--------EEEccCCCCCCCCCCccEEEEcccccCCCHHH
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPS--------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~--------~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~ 206 (294)
.++.+||-+|+|. |.++..++ .+|+++|.++.+.. .+..+...+ . ..+|+|+-+..- ..
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~--~-~~~D~vid~~g~-----~~ 246 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQC--K-EELDFIISTIPT-----HY 246 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGC--C-SCEEEEEECCCS-----CC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHH--h-cCCCEEEECCCc-----HH
Confidence 4678999999874 55555554 48999998885332 222222222 1 268998865432 22
Q ss_pred HHHHHHHhcCcCcEEEEEee
Q 022592 207 YLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~i~e~ 226 (294)
.+..+.++|+|+|.++++..
T Consensus 247 ~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 247 DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHHHHHhcCCEEEEECC
Confidence 57788899999999998754
No 324
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.09 E-value=1.5 Score=39.00 Aligned_cols=78 Identities=21% Similarity=0.289 Sum_probs=45.4
Q ss_pred EccCCC-C-CCCCCCccEEEEcccccC--------CC----HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHH
Q 022592 177 ACDMSN-T-PLNSSSVDVAVFCLSLMG--------IN----FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKF 242 (294)
Q Consensus 177 ~~d~~~-l-p~~~~~fD~Vi~~~~l~~--------~~----~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~ 242 (294)
++|+.. + .+++++||+|+...-..- .+ ....+.++.++|+|||.+++.- ...............+
T Consensus 44 ~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~-~~~~~~~~~~~~l~~l 122 (319)
T 1eg2_A 44 VCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG-GLQYQGEAGSGDLISI 122 (319)
T ss_dssp ECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE-CSCCCCCTTBCCHHHH
T ss_pred CCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc-CcccccccccccHHHH
Confidence 555533 1 134567888777654431 12 3467888899999999998852 2222111111244566
Q ss_pred HHHHHHCC-CeEEE
Q 022592 243 SKAVCDLG-FAPVS 255 (294)
Q Consensus 243 ~~~l~~~G-f~~~~ 255 (294)
..++...| |....
T Consensus 123 ~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 123 ISHMRQNSKMLLAN 136 (319)
T ss_dssp HHHHHHHCCCEEEE
T ss_pred HHHHhCcccceeEE
Confidence 67777777 76654
No 325
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=86.33 E-value=0.44 Score=42.85 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCC--------CcEEEccCC-----C----C-CCCCCCccEEEE
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSND--------PSVIACDMS-----N----T-PLNSSSVDVAVF 195 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~--------~~~~~~d~~-----~----l-p~~~~~fD~Vi~ 195 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+ ...+ .|.. + + ......+|+|+-
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV-LQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE-EECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-EcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 4678999999875 55555554 3 79999987732 1111 1211 0 0 000145899886
Q ss_pred cccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 196 CLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 196 ~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+.. -...+..+.++|+|||.++++..
T Consensus 249 ~~g-----~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 249 CTG-----AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CSC-----CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CCC-----ChHHHHHHHHHhcCCCEEEEEec
Confidence 543 24578889999999999988643
No 326
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.13 E-value=1.2 Score=35.99 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCC--------CCcEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSN--------DPSVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~--------~~~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||.+|+ |.|..+..++ .+|+++|.++. .... ..|..+.. .....+|+|+.+.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 36779999995 3454444333 47889987752 1122 22332211 1123599999765
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
. ...+..+.++|+|||.++++..
T Consensus 116 g------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 116 A------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp C------THHHHHHHHTEEEEEEEEECSC
T ss_pred c------hHHHHHHHHHhccCCEEEEEcC
Confidence 4 3578889999999999988643
No 327
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.04 E-value=6 Score=34.93 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=56.9
Q ss_pred CEEEEEcCcccHHHHHhc----cceEEEeccC-----------------CCCcEEEccCCCCC---------CCCCCccE
Q 022592 143 LVIADFGCGDARLAKSVK----NKVFSFDLVS-----------------NDPSVIACDMSNTP---------LNSSSVDV 192 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~----~~v~gvD~s~-----------------~~~~~~~~d~~~lp---------~~~~~fD~ 192 (294)
..||+||||-=..+..+. ..++-+|... .+..++.+|+.+ . +.....=+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEE
Confidence 479999999877766665 2566777422 345688888876 2 11233457
Q ss_pred EEEcccccCCC---HHHHHHHHHHhcCcCcEEEEEee
Q 022592 193 AVFCLSLMGIN---FPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 193 Vi~~~~l~~~~---~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+++-.+|++.+ ...+++.+...+.||+.|++..+
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 77788888864 45778888888888888888643
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=83.23 E-value=2.5 Score=37.49 Aligned_cols=81 Identities=19% Similarity=0.255 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCcc--cHHHHHhc----cceEEEeccCCCCcEE-------EccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGD--ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~--G~~~~~l~----~~v~gvD~s~~~~~~~-------~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+|. |..+..++ .+|+++|.++.+..+. ..|..... .....+|+|+.+..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence 4678999999874 44444443 4899999887543211 11222211 11236999987655
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+.++.++|++||.++++..
T Consensus 223 ------~~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 223 ------GPDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp ------HHHHHHHHHTEEEEEEEEECCC
T ss_pred ------ChhHHHHHHHhcCCCEEEEEee
Confidence 2334456689999999998754
No 329
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.08 E-value=1.4 Score=38.65 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCc--------EEEccCCCCCCCCCCccEEEEcccccCCCHHH
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPS--------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~--------~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~ 206 (294)
.++.+||=+|+|. |.++..++ .+|++++ ++.+.. .+..|...+ ...+|+|+-+.. ..
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v---~~g~Dvv~d~~g------~~ 210 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQV---TQKYFAIFDAVN------SQ 210 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGC---CSCEEEEECC----------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHh---CCCccEEEECCC------ch
Confidence 4678999999953 55555554 4899999 775332 222232222 456999886543 12
Q ss_pred HHHHHHHhcCcCcEEEEE
Q 022592 207 YLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~i~ 224 (294)
.+..+.++|+|+|.++++
T Consensus 211 ~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 211 NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ---TTGGGEEEEEEEEEE
T ss_pred hHHHHHHHhcCCCEEEEE
Confidence 336678999999999887
No 330
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=81.34 E-value=16 Score=33.00 Aligned_cols=117 Identities=11% Similarity=0.074 Sum_probs=66.9
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-cceEEEeccC------------CCC---cEEEccCCCCCCCCCCccEEEE
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-NKVFSFDLVS------------NDP---SVIACDMSNTPLNSSSVDVAVF 195 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-~~v~gvD~s~------------~~~---~~~~~d~~~lp~~~~~fD~Vi~ 195 (294)
+++.+.....+..||.|+.+.|.++..++ ..++.+.-|- ..+ .+...+... -....||+|+.
T Consensus 29 ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~ 106 (375)
T 4dcm_A 29 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA--DYPQQPGVVLI 106 (375)
T ss_dssp HHHTTTTCCCCSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS--CCCSSCSEEEE
T ss_pred HHHhhhhccCCCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc--ccccCCCEEEE
Confidence 45554433244579999999999998887 3555552221 111 112222211 12356999887
Q ss_pred cccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc
Q 022592 196 CLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS 259 (294)
Q Consensus 196 ~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 259 (294)
...=.-......|..+...|.||+.+++..-.... ...+.+.|++. +..+.....
T Consensus 107 ~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~--------~~~~~~~l~~~-~~~~~~~~a 161 (375)
T 4dcm_A 107 KVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDI--------HTSTLELFEKV-LGPTTTTLA 161 (375)
T ss_dssp ECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGC--------CHHHHHHHHHH-TCCEEECCC
T ss_pred EcCCCHHHHHHHHHHHHhhCCCCCEEEEEecccch--------HHHHHHHHHhh-cCccchhhh
Confidence 53321124557788899999999999887543222 14566666664 333433333
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.27 E-value=1.7 Score=39.22 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCC--------cEEEccCCCCC----------CCCCCccEEEE
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDP--------SVIACDMSNTP----------LNSSSVDVAVF 195 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~--------~~~~~d~~~lp----------~~~~~fD~Vi~ 195 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+. ..+. |..... ...+.+|+|+-
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV-DPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE-CTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE-CCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 4778999999864 55555554 3 788998876321 1111 111100 22347999886
Q ss_pred cccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 196 CLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 196 ~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+.. -...+..+.++|++||.++++..
T Consensus 260 ~~G-----~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 260 CAG-----VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CSC-----CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCC-----CHHHHHHHHHHhccCCEEEEEec
Confidence 533 25678899999999999998643
No 332
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=81.25 E-value=0.63 Score=41.31 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCc--ccHHHHHhc----cceEEEeccCCCCcE--------EEccCCCCC-------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV--------IACDMSNTP-------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG--~G~~~~~l~----~~v~gvD~s~~~~~~--------~~~d~~~lp-------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|++ .|..+..++ .+|+++|.++.+... ...|..+.. ...+.+|+|+.+..
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence 477899999983 455554443 489999987632111 112222211 11246999887655
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+..+.++|+++|.++++..
T Consensus 228 ------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 228 ------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp ------HHHHHHHHTTEEEEEEEEECCC
T ss_pred ------cchHHHHHHHHhhCCEEEEEee
Confidence 3578899999999999998643
No 333
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=81.19 E-value=1.6 Score=39.14 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCC--------Cc-EEEccCCCCC------CCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSND--------PS-VIACDMSNTP------LNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~--------~~-~~~~d~~~lp------~~~~~fD~Vi~~~~l 199 (294)
.++.+||-+|+|. |.++..++ .+|+++|.++.+ .. ++..+..++. .....+|+|+-+..
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g- 266 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG- 266 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 4678999999774 55554444 489999987632 12 2221111110 11236999987654
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+..+.++|+|||.++++..
T Consensus 267 -----~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 267 -----GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp -----SSCHHHHHHHEEEEEEEEEECC
T ss_pred -----hHHHHHHHHHhhcCCEEEEEec
Confidence 2356778899999999998754
No 334
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.95 E-value=0.76 Score=40.89 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCC--------cEEEccCCCCCC------CCCCccEEEEccccc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDP--------SVIACDMSNTPL------NSSSVDVAVFCLSLM 200 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~--------~~~~~d~~~lp~------~~~~fD~Vi~~~~l~ 200 (294)
.++.+||-+|+|. |.++..++ .+|+++|.++.+. ..+ .|..+..+ ..+.+|+|+.+..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~g~~d~vid~~g-- 241 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQKEIGGAHGVLVTAV-- 241 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEESSC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeCC--
Confidence 4678899999875 66666555 4899999887322 111 12211110 0135888876532
Q ss_pred CCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 201 GINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 201 ~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
-...+..+.++|+|+|.++++.
T Consensus 242 ---~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 242 ---SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ---CHHHHHHHHHHEEEEEEEEECS
T ss_pred ---CHHHHHHHHHHhccCCEEEEeC
Confidence 2567889999999999999864
No 335
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=80.29 E-value=31 Score=30.64 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=74.1
Q ss_pred HHhhccCCCCEEEEEcCcccHHHHHhc------cceEEEeccC-------------------------------------
Q 022592 134 KWLKDHSPSLVIADFGCGDARLAKSVK------NKVFSFDLVS------------------------------------- 170 (294)
Q Consensus 134 ~~l~~~~~~~~VLDiGcG~G~~~~~l~------~~v~gvD~s~------------------------------------- 170 (294)
+++....+...|+-+|||.=.....+. -.++=+|...
T Consensus 83 ~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s 162 (334)
T 3iei_A 83 AFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDS 162 (334)
T ss_dssp HHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEEC
T ss_pred HHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCC
Confidence 344433245689999999766555443 1345555322
Q ss_pred CCCcEEEccCCCC----------CCCCCCccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeecCCC-------
Q 022592 171 NDPSVIACDMSNT----------PLNSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRF------- 230 (294)
Q Consensus 171 ~~~~~~~~d~~~l----------p~~~~~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~------- 230 (294)
.+..++.+|+.+. .+.....-++++-.+|.+.++ ..+|+.+.... |+|.++++|.....
T Consensus 163 ~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M 241 (334)
T 3iei_A 163 KRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIM 241 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHH
T ss_pred CceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHH
Confidence 3446778888662 133344568888888888654 46666666655 66777777643211
Q ss_pred -------CCCC----CCCCHHHHHHHHHHCCCeEEE
Q 022592 231 -------DPNT----GGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 231 -------~~~~----~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
+... .+.+.+...+.|.++||..+.
T Consensus 242 ~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~ 277 (334)
T 3iei_A 242 IENLRRRQCDLAGVETCKSLESQKERLLSNGWETAS 277 (334)
T ss_dssp HHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcce
Confidence 0011 114778889999999999865
No 336
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=78.87 E-value=2 Score=37.98 Aligned_cols=80 Identities=10% Similarity=0.045 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCC-CC-------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSN-TP-------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~-lp-------~~~~~fD~Vi~~~ 197 (294)
.++.+||-.|| |.|..+..++ .+|+++|.++.. .. ...|..+ .. ...+.+|+|+.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 46779999998 4444444433 478899877521 11 1224332 11 1124699998776
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
. ...+..+.++|++||.++++..
T Consensus 223 g------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 223 G------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp C------HHHHHHHHTTEEEEEEEEECCC
T ss_pred C------hHHHHHHHHHHhcCCEEEEEec
Confidence 5 3468889999999999988643
No 337
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=78.86 E-value=6.3 Score=34.96 Aligned_cols=81 Identities=10% Similarity=0.135 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCC--------CcEEEccCC---CCC------CC---CCCccEEE
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSND--------PSVIACDMS---NTP------LN---SSSVDVAV 194 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~---~lp------~~---~~~fD~Vi 194 (294)
.++.+||-+|+|. |.++..++ ..|+++|.++.+ ...+ .|.. ++. .. ...+|+|+
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEE-EcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 4678999999864 55555544 368999987632 1211 1222 110 01 24589988
Q ss_pred EcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 195 FCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 195 ~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
-+.. ....+..+.++|+|+|.++++..
T Consensus 246 d~~g-----~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 246 DCSG-----NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp ECSC-----CHHHHHHHHHHSCTTCEEEECSC
T ss_pred ECCC-----CHHHHHHHHHHHhcCCEEEEEec
Confidence 6543 14578889999999999988643
No 338
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=78.56 E-value=2.1 Score=38.13 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCC--------c-EEEccCCCCC------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDP--------S-VIACDMSNTP------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~--------~-~~~~d~~~lp------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+. . ++..+-.++. .....+|+|+-+..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 4677899999874 55555554 3 799999876321 1 2211111110 11235999886543
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
- ...+..+.++|+|||.++++.
T Consensus 245 ~-----~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 245 D-----VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp C-----TTHHHHHHHHEEEEEEEEECC
T ss_pred C-----hHHHHHHHHHHhcCCEEEEec
Confidence 1 357888999999999999864
No 339
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=78.20 E-value=2 Score=33.34 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=32.0
Q ss_pred CCCCCCCccEEEEccccc-C-C-CHHHHHHHHHHhcCcCcEEEE
Q 022592 183 TPLNSSSVDVAVFCLSLM-G-I-NFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 183 lp~~~~~fD~Vi~~~~l~-~-~-~~~~~l~el~r~LkpgG~l~i 223 (294)
+.++..+||+|+...--. . . -+..++..+...|+|||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 446688999998755444 2 2 348999999999999999987
No 340
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=78.17 E-value=1.8 Score=38.98 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE-------EEccCCC----CC-----CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSN----TP-----LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~-------~~~d~~~----lp-----~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+ ...|..+ +. ...+.+|+|+-+.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 4678999999864 55555444 3 68999988743221 1112211 10 1123689988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e~ 226 (294)
. ....+..+.++|+++ |.++++..
T Consensus 271 g-----~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 271 G-----NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp C-----CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred C-----CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 3 146788999999999 99988643
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.64 E-value=6.5 Score=35.31 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE-------EEccCC--CCC-------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMS--NTP-------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~-------~~~d~~--~lp-------~~~~~fD~Vi~~~ 197 (294)
.++.+||=+|+|. |.++..++ . .|+++|.++.+.++ ...|.. ... ...+.+|+|+-+.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 4677899999863 55555554 3 79999988743221 011211 100 1123699988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e~ 226 (294)
. -...+..+.++|++| |.++++..
T Consensus 272 g-----~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 272 G-----NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp C-----CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred C-----CHHHHHHHHHHhhccCCEEEEEcc
Confidence 3 246788999999997 99998643
No 342
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=77.22 E-value=2.3 Score=37.81 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=31.7
Q ss_pred cHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc---cceEEEeccCC
Q 022592 127 LPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK---NKVFSFDLVSN 171 (294)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~~ 171 (294)
..+..++.... .++..|||.-||+|..+.+.. .+.+|+|+++.
T Consensus 240 ~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~ 285 (323)
T 1boo_A 240 KLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPE 285 (323)
T ss_dssp HHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHH
T ss_pred HHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHH
Confidence 34455554432 477899999999999877665 58999999873
No 343
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.15 E-value=13 Score=32.56 Aligned_cols=102 Identities=10% Similarity=0.007 Sum_probs=58.6
Q ss_pred ceEEEeccCCCCcEE-EccCCCCCCCCCCccEEEEcccccCC--------CH----HHHHHHHHHhcCcCcEEEEEeecC
Q 022592 162 KVFSFDLVSNDPSVI-ACDMSNTPLNSSSVDVAVFCLSLMGI--------NF----PNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 162 ~v~gvD~s~~~~~~~-~~d~~~lp~~~~~fD~Vi~~~~l~~~--------~~----~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
+|.-+++.+ ...+. ..|+...+ ..+.+|+|++...-... |- .-++.-+..+|+|||.+++--+..
T Consensus 180 ~v~wi~Pi~-GAt~~~~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 180 MVDWLSDRP-EATFRARLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp EEEEEESST-TCSEECCGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred eeEeeccCC-CceeecccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 444444432 33344 56665533 23679999987655431 11 135667789999999999976543
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCeEEEEe------ccCCeEEEEEEEECC
Q 022592 229 RFDPNTGGADPNKFSKAVCDLGFAPVSKD------FSNKMFIMFYFKKKE 272 (294)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~------~~~~~f~~i~~~k~~ 272 (294)
.- ...+.+...|.+ -|..+..- .+.+.|.++...+.+
T Consensus 258 aD------r~se~lv~~LaR-~F~~Vr~vKP~ASR~StEvf~La~gf~g~ 300 (320)
T 2hwk_A 258 AD------RASESIIGAIAR-QFKFSRVCKPKSSLEETEVLFVFIGYDRK 300 (320)
T ss_dssp CS------HHHHHHHHHHHT-TEEEEEEECCTTCCSTTCEEEEEEEECCC
T ss_pred Cc------ccHHHHHHHHHH-hcceeeeeCCCCccccceEEEEEEeecCC
Confidence 21 123667777766 47777622 145555555554443
No 344
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=76.70 E-value=23 Score=31.04 Aligned_cols=75 Identities=23% Similarity=0.368 Sum_probs=46.4
Q ss_pred CCCEEEEEcCcccHHHHHhcc---------ceEEEeccCCCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHHHHH
Q 022592 141 PSLVIADFGCGDARLAKSVKN---------KVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEA 211 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~---------~v~gvD~s~~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l~el 211 (294)
.+..|+=+|||.|..+..|+. +.+.+|+.+.... + .+..++.+....+ + ...++.+
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~----------l-~~~~NV~li~~fv---d-e~dl~~l 124 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI----------L-NGLRDVTLVTRFV---D-EEYLRSI 124 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG----------G-TTCTTEEEEECCC---C-HHHHHHH
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhh----------h-cCCCcEEEEeccC---C-HHHHHHH
Confidence 356999999999999988863 3445555332111 0 1123444433221 2 4556777
Q ss_pred HHhcCcCcEEEEEeecCCC
Q 022592 212 QRVLKPSGWLLIAEVKSRF 230 (294)
Q Consensus 212 ~r~LkpgG~l~i~e~~~~~ 230 (294)
...+....+|+|.|+.+.-
T Consensus 125 ~~~~~~~~iLLISDIRS~r 143 (307)
T 3mag_A 125 KKQLHPSKIILISDVRSKR 143 (307)
T ss_dssp HHHHTTSCEEEEECCCC--
T ss_pred HHhccCCCEEEEEEecCCC
Confidence 8888889999999988754
No 345
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=76.48 E-value=18 Score=26.04 Aligned_cols=69 Identities=10% Similarity=0.001 Sum_probs=45.0
Q ss_pred cEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEecc-CCeEEEEE
Q 022592 191 DVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFS-NKMFIMFY 267 (294)
Q Consensus 191 D~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~f~~i~ 267 (294)
|.++-...+...-|.--+....+-|.+|..|.|.--. ..+..++..++++.|+++...... ...|.+++
T Consensus 26 ~~~LD~rGl~CP~Pvl~tkkaL~~l~~Ge~L~Vl~dd--------~~a~~dI~~~~~~~G~~v~~~e~~~~g~~~i~I 95 (98)
T 1jdq_A 26 TKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDY--------PMSKERIPETVKKLGHEVLEIEEVGPSEWKIYI 95 (98)
T ss_dssp CEEEECSSCCSSHHHHHHHHHHHTCCTTCEEEEEESS--------CTHHHHHHHHHHHSSCCEEEEEECSSSCEEEEE
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHhCCCCCEEEEEECC--------ccHHHHHHHHHHHCCCEEEEEEEecCCEEEEEE
Confidence 4455455555454555555666778999887775311 124588999999999999887654 45565554
No 346
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=76.45 E-value=2.3 Score=38.30 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE-------EEccCCC----CC-----CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSN----TP-----LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~-------~~~d~~~----lp-----~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+ ...|..+ +. ...+.+|+|+-+.
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~ 269 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 269 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECC
Confidence 4678999999864 55555544 3 68999988743211 1111111 10 1123689988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e 225 (294)
. -...+..+.++|+++ |.++++.
T Consensus 270 g-----~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 270 G-----RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp C-----CHHHHHHHHHTBCTTTCEEEECC
T ss_pred C-----CHHHHHHHHHHHhcCCCEEEEEc
Confidence 3 146788999999999 9998864
No 347
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=76.23 E-value=8 Score=39.85 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=66.0
Q ss_pred CCEEEEEcCcccHHHHHhc--c---ceEEEeccC----------CCCcEEEccCCCC---------------CCC-CCCc
Q 022592 142 SLVIADFGCGDARLAKSVK--N---KVFSFDLVS----------NDPSVIACDMSNT---------------PLN-SSSV 190 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~--~---~v~gvD~s~----------~~~~~~~~d~~~l---------------p~~-~~~f 190 (294)
..+++|+=||.|.+...+. + .+.++|+.+ +...++..|+..+ .++ .+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~v 619 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDV 619 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCe
Confidence 3579999999999877663 3 467999987 3445555554211 121 3468
Q ss_pred cEEEEcccccCC---C---H----------HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 191 DVAVFCLSLMGI---N---F----------PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 191 D~Vi~~~~l~~~---~---~----------~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
|+|+...--..+ . . ...+..+.+.++| .++++|=...+.....+.....+...|...||.+.
T Consensus 620 Dll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rP--k~~llENV~glls~~~~~~~~~i~~~L~~lGY~v~ 697 (1002)
T 3swr_A 620 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP--RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCT 697 (1002)
T ss_dssp SEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCC--SEEEEEEEGGGGTTGGGHHHHHHHHHHHHHTCEEE
T ss_pred eEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCC--CEEEEeccHHHhccCcchHHHHHHHHHHhcCCeEE
Confidence 999976544321 1 0 1122344555677 45555533333222222345678888999999886
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 698 ~ 698 (1002)
T 3swr_A 698 F 698 (1002)
T ss_dssp E
T ss_pred E
Confidence 6
No 348
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=76.11 E-value=8.3 Score=34.28 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=49.8
Q ss_pred CEEEEEcCcc-cHHH-HHhc-----cc-eEEEeccCC---CCc--------EEEccCCCCCCC-----CCCccEEEEccc
Q 022592 143 LVIADFGCGD-ARLA-KSVK-----NK-VFSFDLVSN---DPS--------VIACDMSNTPLN-----SSSVDVAVFCLS 198 (294)
Q Consensus 143 ~~VLDiGcG~-G~~~-~~l~-----~~-v~gvD~s~~---~~~--------~~~~d~~~lp~~-----~~~fD~Vi~~~~ 198 (294)
.+||-+|+|. |.++ ..++ .. |+++|.++. +.. .+ |..+..+. .+.+|+|+-+..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~~g 251 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEATG 251 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEECCC
Confidence 7999999853 5555 4444 24 999998775 322 22 33221111 126899886533
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
-...+..+.++|+++|.++++..
T Consensus 252 -----~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 252 -----FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECCC
T ss_pred -----ChHHHHHHHHHHhcCCEEEEEeC
Confidence 24578899999999999988654
No 349
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=75.98 E-value=2.1 Score=38.43 Aligned_cols=81 Identities=15% Similarity=0.223 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcEE-------EccCCC----CC-----CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN----TP-----LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~~-------~~d~~~----lp-----~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+. ..|..+ +. ...+.+|+|+-+.
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 4678999999864 45555444 3 689999887432211 112111 10 1123689988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e 225 (294)
. ....+..+.++|+++ |.++++.
T Consensus 269 g-----~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 269 G-----NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp C-----CHHHHHHHHHTBCTTTCEEEECS
T ss_pred C-----cHHHHHHHHHhhccCCcEEEEEe
Confidence 3 146788999999999 9998864
No 350
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=75.89 E-value=2.3 Score=38.27 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE-------EEccCCC----CC-----CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV-------IACDMSN----TP-----LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~-------~~~d~~~----lp-----~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+ ...|..+ +. ...+.+|+|+-+.
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 4678999999864 55555444 3 68999988743221 1112211 10 1123689988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e 225 (294)
. ....+..+.++|+++ |.++++.
T Consensus 270 g-----~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 270 G-----RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp C-----CHHHHHHHHHHBCTTTCEEEECS
T ss_pred C-----CHHHHHHHHHHhhcCCcEEEEec
Confidence 3 146788899999999 9998864
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.71 E-value=1.9 Score=38.31 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCCCC------CCCccEEEEcccccC
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPLN------SSSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp~~------~~~fD~Vi~~~~l~~ 201 (294)
.++.+||-+|+|. |..+..++ .+|+++|.++.+..+ ...|..+..+. .+.+|+|+.+..
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g--- 239 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV--- 239 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC---
Confidence 4678999999863 44444443 488999987632111 11233221110 035899886544
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
....+..+.++|+++|.++++.
T Consensus 240 --~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 240 --SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp --CHHHHHHHHHHEEEEEEEEECC
T ss_pred --CHHHHHHHHHHhhcCCEEEEec
Confidence 2467888999999999998863
No 352
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=75.28 E-value=18 Score=25.04 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=46.3
Q ss_pred ccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEE
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFY 267 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~ 267 (294)
.|..+-...+..+.|.--+....+-|.+|..|.+.--. ..+..++..++++.|+++.........|.+++
T Consensus 9 ~~~~lD~rGl~CP~Pvl~~kkal~~l~~G~~l~V~~dd--------~~a~~di~~~~~~~G~~~~~~~~~~~~~~i~I 78 (82)
T 3lvj_C 9 PDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD--------PATTRDIPGFCTFMEHELVAKETDGLPYRYLI 78 (82)
T ss_dssp CSEEEECTTCCTTHHHHHHHHHHHTSCTTCEEEEEECC--------TTHHHHHHHHHHHTTCEEEEEECSSSSEEEEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHhCCCCCEEEEEECC--------ccHHHHHHHHHHHCCCEEEEEEecCCEEEEEE
Confidence 45555555555554555556666778899887775311 12457899999999999988766666665554
No 353
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=75.05 E-value=2.5 Score=38.06 Aligned_cols=81 Identities=17% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcEE-------EccCCC----CC-----CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSVI-------ACDMSN----TP-----LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~~-------~~d~~~----lp-----~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+|. |.++..++ . .|+++|.++.+..+. ..|..+ +. ...+.+|+|+-+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECC
Confidence 4678999999863 45555444 3 689999887432211 112111 00 1113689988654
Q ss_pred cccCCCHHHHHHHHHHhcCcC-cEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPS-GWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~Lkpg-G~l~i~e 225 (294)
. -...+..+.++|+++ |.++++.
T Consensus 274 G-----~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 274 G-----TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp C-----CHHHHHHHHHTBCTTTCEEEECC
T ss_pred C-----CHHHHHHHHHHhhcCCCEEEEEC
Confidence 3 146788999999999 9998864
No 354
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=74.80 E-value=1.3 Score=40.09 Aligned_cols=80 Identities=16% Similarity=0.271 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCcEE-------EccCCCC----CCCCCCccEEEEcccccCCC
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNT----PLNSSSVDVAVFCLSLMGIN 203 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~~~-------~~d~~~l----p~~~~~fD~Vi~~~~l~~~~ 203 (294)
.++.+||-+|+|. |.++..++ ..|+++|.++.+..+. ..|..+. .+. ..+|+|+-+..-
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~-~g~Dvvid~~g~---- 267 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-KSFDFILNTVAA---- 267 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT-TCEEEEEECCSS----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh-cCCCEEEECCCC----
Confidence 4678999999874 55555554 3799999887432210 1111110 011 468998865442
Q ss_pred HHHHHHHHHHhcCcCcEEEEEe
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+..+.++|+|+|.++++.
T Consensus 268 -~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 -PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp -CCCHHHHHTTEEEEEEEEECC
T ss_pred -HHHHHHHHHHhccCCEEEEec
Confidence 224677889999999998864
No 355
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.70 E-value=1 Score=40.17 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=49.6
Q ss_pred CCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE------EEccCCCCCC-------CCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV------IACDMSNTPL-------NSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~------~~~d~~~lp~-------~~~~fD~Vi~~~~l~~ 201 (294)
++.+||-+|+|. |.++..++ . +|+++|.++.+..+ ...|..+..+ ....+|+|+-+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g--- 240 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG--- 240 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCC---
Confidence 677899999853 44444443 4 79999987632111 1112211110 0235899886543
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
....+..+.++|+++|.++++.
T Consensus 241 --~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 241 --NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp --CHHHHHHHHHHEEEEEEEEECC
T ss_pred --CHHHHHHHHHHHhcCCEEEEEe
Confidence 1467888999999999988863
No 356
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=73.69 E-value=12 Score=33.34 Aligned_cols=82 Identities=12% Similarity=0.108 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCCcE----------EEccCC---CCC------CCCCCccEEE
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDPSV----------IACDMS---NTP------LNSSSVDVAV 194 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~~~----------~~~d~~---~lp------~~~~~fD~Vi 194 (294)
.++.+||=+|+|. |.++..++ . .|+++|.++.+..+ ...+.. ++. .....+|+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 4677899899864 55555554 2 48999987732211 111100 000 1134689988
Q ss_pred EcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 195 FCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 195 ~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
-+.. -...+..+.++|++||.++++..
T Consensus 258 d~~g-----~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 258 ECTG-----VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp ECSC-----CHHHHHHHHHHSCTTCEEEECCC
T ss_pred ECCC-----ChHHHHHHHHHhcCCCEEEEEcc
Confidence 6543 24578899999999999998743
No 357
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=73.55 E-value=2.2 Score=39.34 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCcccHHHHHhc-------cceEEEeccC
Q 022592 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVS 170 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~ 170 (294)
.++..|+||||+.|.++..++ .+|+++++++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 467799999999999887654 3799999987
No 358
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=73.45 E-value=4.1 Score=36.12 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=49.5
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCc---------EEEccCCCCC------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPS---------VIACDMSNTP------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~---------~~~~d~~~lp------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+ |.|..+..++ .+|++++.++.+.. ++..+ .++. .....+|+|+.+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCc
Confidence 46789999997 3455555444 48999998763221 22211 1110 11236999987655
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
- ..+..+.++|++||.++++.
T Consensus 237 ~------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 237 G------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp --------CHHHHHHTEEEEEEEEEC-
T ss_pred h------hHHHHHHHhhcCCCEEEEEE
Confidence 2 35778899999999999864
No 359
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=73.43 E-value=3.3 Score=36.77 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCcccHHHHHhc---cceEEEeccC
Q 022592 140 SPSLVIADFGCGDARLAKSVK---NKVFSFDLVS 170 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~---~~v~gvD~s~ 170 (294)
.++..|||.-||+|..+.+.. .+.+|+|+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 477899999999999877665 5899999987
No 360
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=73.19 E-value=1.6 Score=38.87 Aligned_cols=81 Identities=12% Similarity=0.154 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcE-------EEccCCC-CCC-------CCCCccEEEEccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSN-TPL-------NSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~-lp~-------~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+... ...|..+ ..+ ..+.+|+|+.+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 46789999998 3555554443 478999987632110 1224331 110 0125899887654
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
. ...+..+.++|+++|.++++.
T Consensus 248 ~-----~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 248 S-----EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp C-----HHHHHHHTTSEEEEEEEEECC
T ss_pred c-----HHHHHHHHHHHhcCCEEEEEe
Confidence 2 467889999999999998864
No 361
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=72.42 E-value=5 Score=35.51 Aligned_cols=83 Identities=13% Similarity=0.214 Sum_probs=51.9
Q ss_pred cCCCCEEEEEcCcc-cHHHHHhc-----cceEEEeccCCCC--------cEEEccCCCCC-----C-CCCCccEEEEccc
Q 022592 139 HSPSLVIADFGCGD-ARLAKSVK-----NKVFSFDLVSNDP--------SVIACDMSNTP-----L-NSSSVDVAVFCLS 198 (294)
Q Consensus 139 ~~~~~~VLDiGcG~-G~~~~~l~-----~~v~gvD~s~~~~--------~~~~~d~~~lp-----~-~~~~fD~Vi~~~~ 198 (294)
..++.+||-+|+|. |.++..++ .+|+++|.++.+. ..+...-.++. . ....+|+|+-+..
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVG 248 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCC
Confidence 34778999999864 55555443 4899999887321 11111101110 0 1126898886543
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
-...+..+.++|+++|.++++..
T Consensus 249 -----~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 249 -----AQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECSC
T ss_pred -----CHHHHHHHHHHHhcCCEEEEECC
Confidence 24588999999999999998743
No 362
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=72.17 E-value=6.1 Score=35.02 Aligned_cols=79 Identities=15% Similarity=0.189 Sum_probs=50.0
Q ss_pred CCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCC--------cEEEccCCCCC-------C-CCCCccEEEEccc
Q 022592 141 PSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDP--------SVIACDMSNTP-------L-NSSSVDVAVFCLS 198 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~--------~~~~~d~~~lp-------~-~~~~fD~Vi~~~~ 198 (294)
++.+||-+|+|. |..+..++ . +|+++|.++.+. ..+ .|..... . ....+|+|+.+..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 667899999853 44444443 3 799999876321 111 1221111 0 1235899887644
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
....+..+.++|+++|.++++.
T Consensus 246 -----~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 246 -----APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECC
T ss_pred -----CHHHHHHHHHHHhcCCEEEEEc
Confidence 2467888999999999998864
No 363
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=71.23 E-value=30 Score=29.01 Aligned_cols=55 Identities=7% Similarity=0.038 Sum_probs=41.8
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC--------CCCcEEEccCCCCCCCCCCccEEEEcccccC
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~ 201 (294)
.+||=.|+ |.++..+. ..|++++.++ .++.++.+|+.++. -..+|+|+.+.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCBT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCccc
Confidence 57999995 77766654 2788988776 46788999998866 456899998877654
No 364
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=70.63 E-value=7.9 Score=34.44 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=50.1
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+ ... ..|..+.. .....+|+|+.+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 46779999997 3444444443 478999887621 111 12322211 1123699998775
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
. ...+..+.++|+++|.++++.
T Consensus 248 G------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 248 A------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp H------HHHHHHHHHHEEEEEEEEECC
T ss_pred C------hHHHHHHHHhccCCCEEEEEe
Confidence 5 346788899999999998864
No 365
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=70.60 E-value=5 Score=35.22 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=50.5
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+..+ ...|..... .....+|+|+.+..
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence 46789999884 3455555444 489999987632111 111222111 11246999987655
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
- ..+..+.++|++||.++++..
T Consensus 219 ~------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 219 Q------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp G------GGHHHHHTTEEEEEEEEECCC
T ss_pred h------HHHHHHHHHhcCCCEEEEEec
Confidence 2 467788999999999998753
No 366
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=69.38 E-value=6.3 Score=34.64 Aligned_cols=80 Identities=10% Similarity=0.094 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCc--ccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG--~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|++ .|..+..++ .+|+++|.++.+..+ ...|..... .....+|+|+.+..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 467899999953 344444443 489999987632110 111221111 11235999987655
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+..+.++|++||.++++.
T Consensus 227 ------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 227 ------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp ------GGGHHHHHHHEEEEEEEEECC
T ss_pred ------hHHHHHHHHHhccCCEEEEEc
Confidence 246788889999999999864
No 367
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.12 E-value=25 Score=26.38 Aligned_cols=98 Identities=8% Similarity=0.041 Sum_probs=57.6
Q ss_pred CEEEEEcCcc-cH-HHHHhc---cceEEEeccC--------CCCcEEEccCCCCC----CCCCCccEEEEcccccCCCHH
Q 022592 143 LVIADFGCGD-AR-LAKSVK---NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGINFP 205 (294)
Q Consensus 143 ~~VLDiGcG~-G~-~~~~l~---~~v~gvD~s~--------~~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l~~~~~~ 205 (294)
.+|+=+|||. |. ++..|. ..|+++|.++ ..+.++.+|..+.. ..-..+|+|++...-. ...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~--~~n 85 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG--YEA 85 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH--HHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh--HHH
Confidence 4788888864 32 222332 3899999887 35667888876532 1224688888653311 111
Q ss_pred HHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 206 NYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 206 ~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
..+-...+.+.|+..++..- . .....+.|.++|-..+
T Consensus 86 ~~~~~~a~~~~~~~~iiar~-~-----------~~~~~~~l~~~G~d~v 122 (140)
T 3fwz_A 86 GEIVASARAKNPDIEIIARA-H-----------YDDEVAYITERGANQV 122 (140)
T ss_dssp HHHHHHHHHHCSSSEEEEEE-S-----------SHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCeEEEEE-C-----------CHHHHHHHHHCCCCEE
Confidence 22344567777887766532 1 1445567788887644
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=68.81 E-value=8.8 Score=34.27 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=51.2
Q ss_pred cCCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCC-------CCCCCccEEEEcc
Q 022592 139 HSPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP-------LNSSSVDVAVFCL 197 (294)
Q Consensus 139 ~~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp-------~~~~~fD~Vi~~~ 197 (294)
..++.+||-+|+ |.|..+..++ .+|+++|.++.+ ...+ .|..... .....+|+|+.+.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECC
Confidence 346789999993 4566555554 478999987521 1211 1221110 1124589998765
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
. ...+..+.++|+++|.++++..
T Consensus 240 g------~~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 240 G------GAMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp C------THHHHHHHHHEEEEEEEEECCC
T ss_pred C------HHHHHHHHHHHhcCCEEEEEeC
Confidence 4 2578889999999999888654
No 369
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=68.75 E-value=8 Score=39.87 Aligned_cols=79 Identities=20% Similarity=0.263 Sum_probs=59.1
Q ss_pred CCCEEEEEcCcccH-HHHHhc--cceEEEeccC---------CCCcEEEccCCCCCC-CCCCccEEEEcccccC------
Q 022592 141 PSLVIADFGCGDAR-LAKSVK--NKVFSFDLVS---------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLMG------ 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~-~~~~l~--~~v~gvD~s~---------~~~~~~~~d~~~lp~-~~~~fD~Vi~~~~l~~------ 201 (294)
.+.++||+|.|+-. .+..+. -.|+.+|+-+ ....|+..|.....+ -.-.+|+|+|.++|-.
T Consensus 821 ~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A~a~ 900 (1289)
T 1ej6_A 821 DGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAAGKS 900 (1289)
T ss_dssp TTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHHHHT
T ss_pred ccceEEEccCCCcceeeeecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhhccC
Confidence 55689999999754 344443 3799999876 346788998876433 2346999999999974
Q ss_pred CCHHHHHHHHHHhcCcCc
Q 022592 202 INFPNYLQEAQRVLKPSG 219 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG 219 (294)
.+....++.+.+.+.+.|
T Consensus 901 ~tl~~~~~q~l~~~~~~~ 918 (1289)
T 1ej6_A 901 MTFDAAFQQLIKVLSKST 918 (1289)
T ss_dssp CCHHHHHHHHHHHHHTSC
T ss_pred CcHHHHHHHHHHHHHhcC
Confidence 588899999999888865
No 370
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=68.12 E-value=6.1 Score=34.83 Aligned_cols=80 Identities=9% Similarity=0.029 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC---------CcEEEccCCCC-CC-------CCCCccEEEEc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND---------PSVIACDMSNT-PL-------NSSSVDVAVFC 196 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~---------~~~~~~d~~~l-p~-------~~~~fD~Vi~~ 196 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+ ... ..|..+. .+ ....+|+|+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 46789999997 4555554443 478899877521 111 1233221 11 12458998876
Q ss_pred ccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 197 LSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 197 ~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
.. ...+..+.++|++||.++++..
T Consensus 233 ~g------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 233 VG------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp SC------HHHHHHHHTTEEEEEEEEECCC
T ss_pred CC------HHHHHHHHHHHhcCCEEEEEcc
Confidence 54 3578889999999999988643
No 371
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=67.86 E-value=9.2 Score=34.72 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=68.3
Q ss_pred cCCCcHHHHHHHHhhccCCCCEEEEEcCcccHHHHHhc--cceEEEeccC--------CCCcEEEccCCCCCCCCCCccE
Q 022592 123 HWPELPVNIIVKWLKDHSPSLVIADFGCGDARLAKSVK--NKVFSFDLVS--------NDPSVIACDMSNTPLNSSSVDV 192 (294)
Q Consensus 123 ~~~~~~~~~~~~~l~~~~~~~~VLDiGcG~G~~~~~l~--~~v~gvD~s~--------~~~~~~~~d~~~lp~~~~~fD~ 192 (294)
+++....+.+++.+.. .+.+||.++-+-|.++..+. ..++.+.-|. ....... ......+...||+
T Consensus 29 ~~~~~~~~~l~~~~~~--~~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~d~ 104 (381)
T 3dmg_A 29 GYRDPVHDLLQKTVEP--FGERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARL--ALPWEAAAGAYDL 104 (381)
T ss_dssp SSSCHHHHHHHTTCCC--CSSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEE--CCGGGSCTTCEEE
T ss_pred CCCChHHHHHHHHHHH--hCCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccc--cCCccCCcCCCCE
Confidence 3344223344555443 33589999999999887776 4666664443 2222111 1112223467999
Q ss_pred EEEcccccCC--CHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHH-CCCeEE
Q 022592 193 AVFCLSLMGI--NFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCD-LGFAPV 254 (294)
Q Consensus 193 Vi~~~~l~~~--~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~-~Gf~~~ 254 (294)
|+....=.-. .....|.++.+.|+|||.++++.-... -.+.+.+.++. .|+...
T Consensus 105 v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~--------g~~~~~~~~~~~~~~~~~ 161 (381)
T 3dmg_A 105 VVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNK--------GFERYFKEARALLGYGVV 161 (381)
T ss_dssp EEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG--------THHHHHHHHHHHHSCEEE
T ss_pred EEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHH--------HHHHHHHHHHhhhccccc
Confidence 8865331111 235778888999999999988753321 23556666653 355433
No 372
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=65.98 E-value=11 Score=32.84 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=48.3
Q ss_pred EEEEEcC--cccHHHHHhc----cceEEEeccCCCCc---------EEEc-cCCC-CCCCCCCccEEEEcccccCCCHHH
Q 022592 144 VIADFGC--GDARLAKSVK----NKVFSFDLVSNDPS---------VIAC-DMSN-TPLNSSSVDVAVFCLSLMGINFPN 206 (294)
Q Consensus 144 ~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~---------~~~~-d~~~-lp~~~~~fD~Vi~~~~l~~~~~~~ 206 (294)
.||=+|+ |.|.++..++ .+|+++|.++.+.+ ++.. +... ..+..+.+|+|+-+.. ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------~~ 222 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------DK 222 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------HH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------cH
Confidence 4898887 3455555554 48999998874321 1111 1111 1122356898876543 34
Q ss_pred HHHHHHHhcCcCcEEEEEe
Q 022592 207 YLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~i~e 225 (294)
.+..+.++|+|+|.++++.
T Consensus 223 ~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 223 VLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp HHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEEe
Confidence 8899999999999999864
No 373
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.70 E-value=26 Score=34.22 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=51.7
Q ss_pred CCcEEEccCCCCC----------C-CCCCccEEEEcccccCCCH---HHHHHHHHHhcCcCcEEEEEeecCCCC------
Q 022592 172 DPSVIACDMSNTP----------L-NSSSVDVAVFCLSLMGINF---PNYLQEAQRVLKPSGWLLIAEVKSRFD------ 231 (294)
Q Consensus 172 ~~~~~~~d~~~lp----------~-~~~~fD~Vi~~~~l~~~~~---~~~l~el~r~LkpgG~l~i~e~~~~~~------ 231 (294)
+..++.+|+.+.. + .....-++++-.+|.+.++ ..+|+.+.+ + |+|.++++|......
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f~ 266 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPFS 266 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHHH
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChHH
Confidence 4567788887631 1 2333456777778887654 466777765 4 678888776332110
Q ss_pred ------------C---CCCCCCHHHHHHHHHHCCCeEEE
Q 022592 232 ------------P---NTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 232 ------------~---~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
+ .....+.++..+.|.++||..+.
T Consensus 267 ~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~ 305 (695)
T 2zwa_A 267 KQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVN 305 (695)
T ss_dssp HHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcc
Confidence 0 01124788999999999998655
No 374
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=65.70 E-value=1.9 Score=38.70 Aligned_cols=82 Identities=12% Similarity=0.183 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCcEE-------EccCCCC-C----CCCCCccEEEEcccccCC
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSNT-P----LNSSSVDVAVFCLSLMGI 202 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~~~-------~~d~~~l-p----~~~~~fD~Vi~~~~l~~~ 202 (294)
.++.+||-+|+|. |.++..++ .+|+++|.++.+..+. ..|..+. . +. +.+|+|+-+.....
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g~~~- 255 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCASSLT- 255 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCSCST-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCCCCc-
Confidence 4678999999853 55554444 4799999887543211 1111111 0 11 46999987654200
Q ss_pred CHHHHHHHHHHhcCcCcEEEEEe
Q 022592 203 NFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 203 ~~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+..+.++|++||.++++.
T Consensus 256 --~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 256 --DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp --TCCTTTGGGGEEEEEEEEECC
T ss_pred --HHHHHHHHHHhcCCCEEEEec
Confidence 123556788999999998764
No 375
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=65.69 E-value=13 Score=33.69 Aligned_cols=81 Identities=12% Similarity=0.069 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc----c-ceEEEeccCCCC--------cEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK----N-KVFSFDLVSNDP--------SVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~----~-~v~gvD~s~~~~--------~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||=+|+|. |.++..++ . .|+++|.++.+. ..+. |..... .....+|+|+-+.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVI-DPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE-cCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 4677899999863 44444444 3 789999877322 1111 211111 1123599988654
Q ss_pred cccCCCHHHHHHHHHHhc----CcCcEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVL----KPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~L----kpgG~l~i~e 225 (294)
.- ....+..+.++| ++||.++++.
T Consensus 291 g~----~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 291 GV----PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp SC----HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CC----cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 31 223455555555 9999999864
No 376
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=64.42 E-value=8 Score=34.15 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=50.4
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+ ...+ .|..+.. .....+|+|+.+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 46779999998 4555555544 478999987621 1111 2332211 1123699998776
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
. ...+..+.++|+++|.++++.
T Consensus 244 g------~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 244 G------ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp C------SSSHHHHHHHEEEEEEEEESS
T ss_pred C------HHHHHHHHHhhccCCEEEEEe
Confidence 5 235677889999999988864
No 377
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=63.97 E-value=9.5 Score=33.30 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=49.7
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||-.|+ |.|..+..++ .+|+++|.++.. ... ..|..+.. .....+|+|+.+.
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 46779999994 3444444443 478999887521 111 12322211 1123599998775
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
. ...+..+.++|+++|.++++.
T Consensus 218 g------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 218 G------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp C------GGGHHHHHHTEEEEEEEEECC
T ss_pred c------hHHHHHHHHHhcCCCEEEEEe
Confidence 5 356788899999999998864
No 378
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=63.52 E-value=1.9 Score=39.02 Aligned_cols=82 Identities=13% Similarity=0.185 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCcc-cHHHHHhc-----cceEEEeccCCC--------Cc-EEEcc---CCC----C-CC-CCCCccEEEE
Q 022592 140 SPSLVIADFGCGD-ARLAKSVK-----NKVFSFDLVSND--------PS-VIACD---MSN----T-PL-NSSSVDVAVF 195 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~~~~l~-----~~v~gvD~s~~~--------~~-~~~~d---~~~----l-p~-~~~~fD~Vi~ 195 (294)
.++.+||-+|+|. |.++..++ .+|+++|.++.+ .. ++..+ -.+ + .. ....+|+|+-
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid 273 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 273 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEE
Confidence 3678999999653 44444443 389999987632 12 22111 000 0 01 1225999886
Q ss_pred cccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 196 CLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 196 ~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
+... ...+..+.++|+++|.++++..
T Consensus 274 ~~g~-----~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 274 ATGD-----SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CSSC-----TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC-----HHHHHHHHHHHhcCCEEEEEec
Confidence 5431 2467888999999999988643
No 379
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=63.12 E-value=31 Score=24.75 Aligned_cols=70 Identities=11% Similarity=-0.027 Sum_probs=43.9
Q ss_pred ccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEE
Q 022592 190 VDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFY 267 (294)
Q Consensus 190 fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~ 267 (294)
.|.++-...+..+-|.--+....+-|.+|..|.+.--... +..++..++++.|+++.........|.+++
T Consensus 26 ~~~~LD~rGl~CP~PvlktkkaL~~l~~Ge~L~Vl~dd~~--------a~~dIp~~~~~~G~~v~~~e~~~~~~~i~I 95 (97)
T 1je3_A 26 PDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQ--------SINNIPLDARNHGYTVLDIQQDGPTIRYLI 95 (97)
T ss_dssp EEEEECSBCCSSSSSTHHHHHHTTTCCSSCEEEEEEBCSS--------SSCHHHHHHHHHTCSEEEEEECSSSEEEEE
T ss_pred cCeEEeCCCCCCCHHHHHHHHHHHcCCCCCEEEEEECCcc--------hHHHHHHHHHHCCCEEEEEEeeCCEEEEEE
Confidence 3555545555554444455556667889988777532211 236788999999999988655555555543
No 380
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=62.88 E-value=20 Score=37.22 Aligned_cols=108 Identities=17% Similarity=0.207 Sum_probs=75.1
Q ss_pred CCEEEEEcCcccH-HHHHhc--cceEEEeccC---------CC-CcEEEccCCCCCC-CCCCccEEEEcccccC------
Q 022592 142 SLVIADFGCGDAR-LAKSVK--NKVFSFDLVS---------ND-PSVIACDMSNTPL-NSSSVDVAVFCLSLMG------ 201 (294)
Q Consensus 142 ~~~VLDiGcG~G~-~~~~l~--~~v~gvD~s~---------~~-~~~~~~d~~~lp~-~~~~fD~Vi~~~~l~~------ 201 (294)
+..+||+|.|+-. .+..+. --|+.+|.-+ .. ..|++.|.....+ -...+|++.|.++|-.
T Consensus 828 ~~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~a~ 907 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAAAG 907 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHHTT
T ss_pred CCEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhhCC
Confidence 3689999999753 444443 2789999876 24 6799999876443 2457999999999963
Q ss_pred CCHHHHHHHHHHhcCcCcE--EEEE---------------eec--------CCCCCCCCCCCHHHHHHHHHHC
Q 022592 202 INFPNYLQEAQRVLKPSGW--LLIA---------------EVK--------SRFDPNTGGADPNKFSKAVCDL 249 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~--l~i~---------------e~~--------~~~~~~~~~~~~~~~~~~l~~~ 249 (294)
.+....++.+.+.+++.|. +++- |+. ......+++.+...+++++++.
T Consensus 908 ~tl~~~l~~~l~~~~~~~v~~l~lQLN~Pl~~~~~~r~~LeId~~~~~Y~F~~~gR~EPY~~~~~~~~~i~~~ 980 (1299)
T 3iyl_W 908 TDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEIDLRDHVYRFNGGERVEPYADPVPLQQAIAAL 980 (1299)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEECCCCCSSCSCCBTTTEEEETTTTEEEETTTTBCCBCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhcCceEEEEEecCCCCCCCCCCceEEEecccceEEcCCCCcCCCCCCHHHHHHHHHHh
Confidence 5889999999999999774 3331 111 1223344556888888888775
No 381
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=62.42 E-value=1.8 Score=37.71 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=48.7
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcEE-------EccCCC-CCCC--CCCccEEEEcccccCCC
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI-------ACDMSN-TPLN--SSSVDVAVFCLSLMGIN 203 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~~-------~~d~~~-lp~~--~~~fD~Vi~~~~l~~~~ 203 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+..+. ..|..+ ..+. -..+|+|+. ..-
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~---- 198 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG---- 198 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC----
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH----
Confidence 46789999998 3455555444 4899999876433211 112111 0000 046899887 432
Q ss_pred HHHHHHHHHHhcCcCcEEEEEe
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e 225 (294)
..+..+.++|+++|.++++.
T Consensus 199 --~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 199 --KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --TTHHHHHTTEEEEEEEEEC-
T ss_pred --HHHHHHHHhhccCCEEEEEe
Confidence 35778899999999988764
No 382
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=61.89 E-value=18 Score=32.23 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=48.7
Q ss_pred CCCEEEEEc-Cc-ccHHHHHhc-----cceEEEeccCCC--------CcEEEccCCC-C-----CCCCCCccEEEEcccc
Q 022592 141 PSLVIADFG-CG-DARLAKSVK-----NKVFSFDLVSND--------PSVIACDMSN-T-----PLNSSSVDVAVFCLSL 199 (294)
Q Consensus 141 ~~~~VLDiG-cG-~G~~~~~l~-----~~v~gvD~s~~~--------~~~~~~d~~~-l-----p~~~~~fD~Vi~~~~l 199 (294)
++.+||=+| +| .|.++..++ .+|+++|.++.+ ...+. |... + ....+.+|+|+-+..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi-~~~~~~~~~v~~~~~~g~Dvvid~~g- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVI-DHSKPLAAEVAALGLGAPAFVFSTTH- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEE-CTTSCHHHHHHTTCSCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEE-eCCCCHHHHHHHhcCCCceEEEECCC-
Confidence 566899998 44 355554443 478999987622 11111 1111 0 012346999886533
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEE
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~ 224 (294)
-...+..+.++|+++|.++++
T Consensus 249 ----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 ----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ----HHHHHHHHHHHSCTTCEEEEC
T ss_pred ----chhhHHHHHHHhcCCCEEEEE
Confidence 246788999999999999986
No 383
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=61.23 E-value=5.7 Score=34.82 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=49.1
Q ss_pred CCC-EEEEEcC--cccHHHHHhc----cceEEEeccCCCCc---------EEEc-cC--CCC-CCCCCCccEEEEccccc
Q 022592 141 PSL-VIADFGC--GDARLAKSVK----NKVFSFDLVSNDPS---------VIAC-DM--SNT-PLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~-~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~---------~~~~-d~--~~l-p~~~~~fD~Vi~~~~l~ 200 (294)
++. +||-+|+ |.|..+..++ .+|++++.++.+.. ++.. +. ..+ ......+|+|+-+..
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g-- 226 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG-- 226 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC--
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc--
Confidence 443 7999997 3455555444 47999998864321 1111 11 111 122346899886644
Q ss_pred CCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 201 GINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 201 ~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+..+.++|++||.++++.
T Consensus 227 ----~~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 227 ----GKQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp ----THHHHHHHTTEEEEEEEEECC
T ss_pred ----HHHHHHHHHhhcCCCEEEEEe
Confidence 247888999999999998864
No 384
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=61.03 E-value=9.2 Score=33.99 Aligned_cols=81 Identities=9% Similarity=0.096 Sum_probs=49.6
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+... ...|..+.. .....+|+|+.+..
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence 46778999985 3454444443 478999987632110 112322211 11236999987765
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
- ..+..+.++|++||.++++..
T Consensus 241 ~------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 241 G------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp G------GGHHHHHHHEEEEEEEEECCC
T ss_pred c------hHHHHHHHhccCCCEEEEEec
Confidence 2 257788899999999988653
No 385
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=60.69 E-value=18 Score=27.34 Aligned_cols=108 Identities=12% Similarity=0.022 Sum_probs=55.8
Q ss_pred HHHHhhccCCCCEEEEEcCcccHHHHHhc-------cceEEEeccCCCCc-------EEEccCCCCCCCCCCccEEEEcc
Q 022592 132 IVKWLKDHSPSLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPS-------VIACDMSNTPLNSSSVDVAVFCL 197 (294)
Q Consensus 132 ~~~~l~~~~~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~~~~-------~~~~d~~~lp~~~~~fD~Vi~~~ 197 (294)
.++.+... .+.+|+=||||. .+..++ ..|+.+|.++.... .......++.-.-..+|+|+.+.
T Consensus 12 a~~~~~~~-~~~~v~iiG~G~--iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 12 VYDIVRKN-GGNKILLVGNGM--LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp HHHHHHHH-CCCEEEEECCSH--HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECS
T ss_pred HHHHHHhc-cCCEEEEECCCH--HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeC
Confidence 34444443 467999999863 333332 14778887763211 11111111110013579999876
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHH
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCD 248 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~ 248 (294)
...+... -...|++|+.++-........+....++.+++...+++
T Consensus 89 ~~~~~~~------~~~~l~~g~~vid~~~p~~~~~~~~~~~~d~l~~~~~~ 133 (144)
T 3oj0_A 89 SSKTPIV------EERSLMPGKLFIDLGNPPNIERGNNVITLDEIYEISKK 133 (144)
T ss_dssp CCSSCSB------CGGGCCTTCEEEECCSSCSBCCSTTSEEHHHHHHHHHH
T ss_pred CCCCcEe------eHHHcCCCCEEEEccCCccCCCCCEEEeHHHHHHHHHH
Confidence 6544211 12567888776655443334443334677777766543
No 386
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=60.12 E-value=16 Score=32.51 Aligned_cols=75 Identities=13% Similarity=0.045 Sum_probs=48.2
Q ss_pred CCEEEEEcCcc-cHHHHHhc----cceEEEeccC---CC--------CcEEEccCCCCCCC------CCCccEEEEcccc
Q 022592 142 SLVIADFGCGD-ARLAKSVK----NKVFSFDLVS---ND--------PSVIACDMSNTPLN------SSSVDVAVFCLSL 199 (294)
Q Consensus 142 ~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~---~~--------~~~~~~d~~~lp~~------~~~fD~Vi~~~~l 199 (294)
+.+||-+|+|. |..+..++ .+|+++|.++ .+ ...+ | .+ .+. ...+|+|+.+...
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECCCC
Confidence 78999999842 33333333 4899999876 32 2222 3 32 211 1458998876542
Q ss_pred cCCCHHHHH-HHHHHhcCcCcEEEEEe
Q 022592 200 MGINFPNYL-QEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 200 ~~~~~~~~l-~el~r~LkpgG~l~i~e 225 (294)
...+ ..+.++|+++|.++++.
T Consensus 257 -----~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 257 -----DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp -----CTHHHHHHGGGEEEEEEEEECS
T ss_pred -----hHHHHHHHHHHHhcCCEEEEEe
Confidence 2255 88899999999998864
No 387
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=60.01 E-value=10 Score=33.51 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCcccH--HHHHh-----ccceEEEeccCCC--------CcEEEccCCCCC-------CCC-CCccEEEEc
Q 022592 140 SPSLVIADFGCGDAR--LAKSV-----KNKVFSFDLVSND--------PSVIACDMSNTP-------LNS-SSVDVAVFC 196 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~--~~~~l-----~~~v~gvD~s~~~--------~~~~~~d~~~lp-------~~~-~~fD~Vi~~ 196 (294)
.++.+||-+|+|.|. .+..+ -.+|+++|.++.+ ...+ .|..+.. ... +.+|+|+.+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEE-ecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 467899999998553 33322 2368899987621 1111 1222211 111 469998876
Q ss_pred ccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 197 LSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 197 ~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
..- ...+..+.++|+|+|.++++..
T Consensus 248 ~g~-----~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 248 NNS-----EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CCC-----HHHHTTGGGGEEEEEEEEECCS
T ss_pred CCC-----HHHHHHHHHHHhcCCEEEEECC
Confidence 542 4578888999999999988643
No 388
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=59.74 E-value=33 Score=34.01 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=27.5
Q ss_pred HHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 209 QEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 209 ~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
-++.+.++|- +++.|=...+.....+.....+...|...||.+..
T Consensus 417 ~riv~~~rPk--~fvlENV~glls~~~g~~~~~il~~l~~lGY~v~~ 461 (784)
T 4ft4_B 417 MDIVAYLKPK--YVLMENVVDILKFADGYLGKYALSCLVAMKYQARL 461 (784)
T ss_dssp HHHHHHHCCS--EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCC--EEEEEecCCccccccchHHHHHHHHHHhCCCeeee
Confidence 3455667884 45555333332222233557788889999998876
No 389
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=58.72 E-value=82 Score=27.97 Aligned_cols=76 Identities=20% Similarity=0.325 Sum_probs=47.7
Q ss_pred CCCEEEEEcCcccHHHHHhcc---------ceEEEeccCCCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHHHHH
Q 022592 141 PSLVIADFGCGDARLAKSVKN---------KVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEA 211 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~~---------~v~gvD~s~~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l~el 211 (294)
++..|+-+|+++|..+..|.. +.+.+|+.+... .++.++ .+.++--. ++ ...++.+
T Consensus 75 ~g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~-----~Le~~~----ni~li~~f-----fd-e~~i~~l 139 (348)
T 1vpt_A 75 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDP-----ILNGLR----DVTLVTRF-----VD-EEYLRSI 139 (348)
T ss_dssp TTCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCG-----GGTTCT----TEEEEECC-----CC-HHHHHHH
T ss_pred CCCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhh-----hhcCCC----cEEeehhh-----cC-HHHHHHH
Confidence 456999999999999887762 446677655321 112222 12222211 22 4478888
Q ss_pred HHhcCcCcEEEEEeecCCCC
Q 022592 212 QRVLKPSGWLLIAEVKSRFD 231 (294)
Q Consensus 212 ~r~LkpgG~l~i~e~~~~~~ 231 (294)
...+....+|+|+|+.+.-.
T Consensus 140 ~~~~~~~~vLfISDIRS~~~ 159 (348)
T 1vpt_A 140 KKQLHPSKIILISDVASAAG 159 (348)
T ss_dssp HHHHTTSCEEEEECCCC---
T ss_pred HHHhcCCCEEEEEecccCCC
Confidence 88899999999999877443
No 390
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=57.88 E-value=13 Score=34.02 Aligned_cols=28 Identities=11% Similarity=-0.046 Sum_probs=22.1
Q ss_pred CEEEEEcCcccHHHHHhc--c----c----eEEEeccC
Q 022592 143 LVIADFGCGDARLAKSVK--N----K----VFSFDLVS 170 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~--~----~----v~gvD~s~ 170 (294)
.+|||+-||.|.+...+. + . |.++|+.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~ 48 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFV 48 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCH
Confidence 589999999999877664 2 2 67888876
No 391
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=56.69 E-value=21 Score=32.82 Aligned_cols=79 Identities=10% Similarity=0.083 Sum_probs=49.1
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCC--------cEEEccCCCCCC--------------------
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDP--------SVIACDMSNTPL-------------------- 185 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~--------~~~~~d~~~lp~-------------------- 185 (294)
.++.+||=+|+ |.|.++..++ .++++++.++.+. ..+ .|.....+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHHH
Confidence 46778999997 3455555554 4788888665211 111 11111110
Q ss_pred -----CCCCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 186 -----NSSSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 186 -----~~~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
....+|+|+-+.. ...+..+.++|++||.++++.
T Consensus 306 i~~~t~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEECSC------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEEcCC------chhHHHHHHHhhCCcEEEEEe
Confidence 1246899886544 367888999999999999863
No 392
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.32 E-value=31 Score=30.17 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCcccH-HHHHhc-----cceEEEeccCCCCcE-------EEccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDAR-LAKSVK-----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~-~~~~l~-----~~v~gvD~s~~~~~~-------~~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||=+|+|.+. ++..++ .+|+++|.++.+..+ ...|..+.. .....+|.++.+..
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 477899999998754 222222 489999988732110 011111111 11224666665432
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
-...+....++|+++|.+++..
T Consensus 242 -----~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 242 -----ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp -----CHHHHHHHHHTEEEEEEEEECC
T ss_pred -----CcchhheeheeecCCceEEEEe
Confidence 2677888999999999998863
No 393
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=56.24 E-value=27 Score=24.49 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=38.0
Q ss_pred HHHHHHHhcC-cCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEEEEECC
Q 022592 207 YLQEAQRVLK-PSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFYFKKKE 272 (294)
Q Consensus 207 ~l~el~r~Lk-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~~~k~~ 272 (294)
-.....+-|. +|+.|.|..-.. .+..++..++++.|+++.........|.+.+ +|..
T Consensus 17 ~~kkal~~l~~~G~~L~V~~dd~--------~a~~dI~~~~~~~G~~v~~~~~~~g~~~i~I-~Kg~ 74 (87)
T 3hz7_A 17 RAKKALAELGEAGGVVTVLVDND--------ISRQNLQKMAEGMGYQSEYLEKDNGVIEVTI-VAGE 74 (87)
T ss_dssp HHHHHHHTTGGGCCEEEEEESSH--------HHHHHHHHHHHHHTCEEEEEECGGGCEEEEE-ESCC
T ss_pred HHHHHHHhccCCCCEEEEEECCc--------cHHHHHHHHHHHCCCEEEEEEecCCEEEEEE-EECC
Confidence 3444555676 898887753111 1457899999999999988776666666554 5543
No 394
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=56.15 E-value=45 Score=24.69 Aligned_cols=54 Identities=15% Similarity=0.166 Sum_probs=35.3
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC--------CCCcEEEccCCCCC----CCCCCccEEEEccc
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLS 198 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--------~~~~~~~~d~~~lp----~~~~~fD~Vi~~~~ 198 (294)
.+|+=+|||. ++..++ ..|+++|.++ ....++.+|+.+.. .....+|+|+....
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 4688899854 444443 3799999876 35667888876532 12346898887544
No 395
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=55.85 E-value=22 Score=31.32 Aligned_cols=80 Identities=10% Similarity=0.068 Sum_probs=50.6
Q ss_pred CCC--CEEEEEcCc--ccHHHHHhc----c-ceEEEeccCCC---------CcEEEccCCCCC-------CCCCCccEEE
Q 022592 140 SPS--LVIADFGCG--DARLAKSVK----N-KVFSFDLVSND---------PSVIACDMSNTP-------LNSSSVDVAV 194 (294)
Q Consensus 140 ~~~--~~VLDiGcG--~G~~~~~l~----~-~v~gvD~s~~~---------~~~~~~d~~~lp-------~~~~~fD~Vi 194 (294)
.++ .+||-.|++ .|..+..++ . +|+++|.++.. .. ...|..+.. ...+.+|+|+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEE
Confidence 467 799999984 344444333 4 78999987521 11 122332211 0112589998
Q ss_pred EcccccCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 195 FCLSLMGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 195 ~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
.+.. ...+..+.++|++||.++++..
T Consensus 236 ~~~G------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 236 DNVG------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp ESCC------HHHHHHHHHTEEEEEEEEECCC
T ss_pred ECCC------HHHHHHHHHHhccCcEEEEECC
Confidence 7765 3678899999999999988653
No 396
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=55.63 E-value=8.3 Score=33.78 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=40.5
Q ss_pred CCCEEEEEcCcccHHHHHhc----cc--eEEEeccC----------CCCcEEEccCCCCCCC----CCCccEEEEcc
Q 022592 141 PSLVIADFGCGDARLAKSVK----NK--VFSFDLVS----------NDPSVIACDMSNTPLN----SSSVDVAVFCL 197 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~----~~--v~gvD~s~----------~~~~~~~~d~~~lp~~----~~~fD~Vi~~~ 197 (294)
...+++|+-||.|.+...+. .. |+++|+.+ ....+..+|+.++... .+.+|+++...
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 44589999999998877664 12 68999886 2345778898876421 13589999654
No 397
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=54.97 E-value=13 Score=32.44 Aligned_cols=79 Identities=16% Similarity=0.121 Sum_probs=48.2
Q ss_pred CCC-EEEEEcC--cccHHHHHhc----cceEEEeccCCCC--------cEEEccCCCC------CCCCCCccEEEEcccc
Q 022592 141 PSL-VIADFGC--GDARLAKSVK----NKVFSFDLVSNDP--------SVIACDMSNT------PLNSSSVDVAVFCLSL 199 (294)
Q Consensus 141 ~~~-~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~--------~~~~~d~~~l------p~~~~~fD~Vi~~~~l 199 (294)
++. +||-+|+ |.|.++..++ .+|++++.++.+. ..+ .|..+. ......+|+|+-+..-
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 443 7999997 4455555554 4789999886432 111 111111 1123468998866441
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
..+..+.++|+++|.++++..
T Consensus 227 ------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 227 ------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp ------TTHHHHHHTEEEEEEEEECSC
T ss_pred ------HHHHHHHHhhccCCEEEEEee
Confidence 257788899999999988643
No 398
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=53.77 E-value=9.7 Score=33.81 Aligned_cols=80 Identities=14% Similarity=0.166 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCCC-------CCCCccEEEEcccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL-------NSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp~-------~~~~fD~Vi~~~~l 199 (294)
.++.+||-+|+ |.|..+..++ .+|+++|.++.+..+ ...|.....+ ....+|+|+.+..-
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence 46778998854 3455544444 489999987632110 1112211110 02469999876552
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
..+..+.++|+++|.++++.
T Consensus 246 ------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 246 ------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp ------GGHHHHHHTEEEEEEEEECC
T ss_pred ------HHHHHHHHHhccCCEEEEEE
Confidence 36778889999999998864
No 399
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=52.75 E-value=15 Score=32.22 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCC--------CcEEEccCCCCC--------CCCCCccEEEEcc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSND--------PSVIACDMSNTP--------LNSSSVDVAVFCL 197 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~~~lp--------~~~~~fD~Vi~~~ 197 (294)
.++.+||-.|+ |.|..+..++ .+|+++|.++.+ ... ..|..+.. .....+|+|+.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 46779999995 4555544443 478999887621 111 12332211 0123589998765
Q ss_pred cccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 198 SLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 198 ~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.- ..+..+.++|++||.++++.
T Consensus 223 g~------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 223 GK------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CT------TTHHHHHHTEEEEEEEEECC
T ss_pred cH------HHHHHHHHhhccCCEEEEEe
Confidence 52 46788899999999998864
No 400
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=52.30 E-value=6.7 Score=34.66 Aligned_cols=80 Identities=10% Similarity=0.157 Sum_probs=49.2
Q ss_pred CCCEEEEEcCcc-cHHHHHh------ccceEEEeccCCCC--------c-EEEc----cC-CCCCCCCCCccEEEEcccc
Q 022592 141 PSLVIADFGCGD-ARLAKSV------KNKVFSFDLVSNDP--------S-VIAC----DM-SNTPLNSSSVDVAVFCLSL 199 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~~~~~l------~~~v~gvD~s~~~~--------~-~~~~----d~-~~lp~~~~~fD~Vi~~~~l 199 (294)
++.+||-+|+|. |.++..+ -.+|+++|.++.+. . ++.. |. ..+. ....+|+|+-+...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVGT 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCCC
Confidence 678999999963 4443333 23688999876321 1 1111 10 0111 12269998876442
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+..+.++|+|+|.++++..
T Consensus 249 -----~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 -----EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp -----HHHHHHHHHHEEEEEEEEECCC
T ss_pred -----hHHHHHHHHHhhcCCEEEEeCC
Confidence 4578889999999999988643
No 401
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.91 E-value=72 Score=25.39 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=37.8
Q ss_pred EEEEEcCcccHHHHHhc-------cceEEEeccC------CCCcEEEccCCC-CC---CCCCCccEEEEcccccC
Q 022592 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS------NDPSVIACDMSN-TP---LNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 144 ~VLDiGcG~G~~~~~l~-------~~v~gvD~s~------~~~~~~~~d~~~-lp---~~~~~fD~Vi~~~~l~~ 201 (294)
+||=.| |+|.++..++ ..|++++.++ .++.++.+|+.+ .. -.-..+|+|+.+.....
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~ 75 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG 75 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC
Confidence 577666 4566555543 2788888776 356788999887 21 11235899998877653
No 402
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=50.34 E-value=41 Score=35.73 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=65.6
Q ss_pred CCEEEEEcCcccHHHHHhc--c---ceEEEeccC----------CCCcEEEccCCCC---------------CCC-CCCc
Q 022592 142 SLVIADFGCGDARLAKSVK--N---KVFSFDLVS----------NDPSVIACDMSNT---------------PLN-SSSV 190 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~--~---~v~gvD~s~----------~~~~~~~~d~~~l---------------p~~-~~~f 190 (294)
..+++|+-||.|.+...+. + .+.++|+.+ +...++..|+..+ .++ .+.+
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~~v 930 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDV 930 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTTTC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccccCcc
Confidence 4589999999999877664 3 467899877 2334454443211 111 2468
Q ss_pred cEEEEcccccCC---C---HH-------HH---HHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEE
Q 022592 191 DVAVFCLSLMGI---N---FP-------NY---LQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPV 254 (294)
Q Consensus 191 D~Vi~~~~l~~~---~---~~-------~~---l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 254 (294)
|+|+...--..+ . .. .+ +.++...++|- +++.|=...+.....+.....+...|...||.+.
T Consensus 931 Dvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk--~fv~ENV~glls~~~g~~~~~il~~L~~lGY~v~ 1008 (1330)
T 3av4_A 931 EMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCT 1008 (1330)
T ss_dssp SEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS--EEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCEEE
T ss_pred ceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc--EEEEeccHHHhccCccHHHHHHHHHHHhcCCeee
Confidence 999976544331 1 00 11 23444556774 5555533333322223345778888999999887
Q ss_pred E
Q 022592 255 S 255 (294)
Q Consensus 255 ~ 255 (294)
.
T Consensus 1009 ~ 1009 (1330)
T 3av4_A 1009 F 1009 (1330)
T ss_dssp E
T ss_pred E
Confidence 6
No 403
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=49.94 E-value=61 Score=25.78 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=48.5
Q ss_pred EEEEEcCcccHHHHHhc-------cceEEEeccC--------CCCcEEEccCCCCCC-CCCCccEEEEcccccCC--C--
Q 022592 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLMGI--N-- 203 (294)
Q Consensus 144 ~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--------~~~~~~~~d~~~lp~-~~~~fD~Vi~~~~l~~~--~-- 203 (294)
+||=.|+ +|.++..++ ..|++++.++ ..+.++.+|+.+... .-..+|+|+.+....+. .
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 5676764 455554443 3788888764 478889999876432 11358999988877531 1
Q ss_pred -HHHHHHHHHHhcCc-CcEEEEE
Q 022592 204 -FPNYLQEAQRVLKP-SGWLLIA 224 (294)
Q Consensus 204 -~~~~l~el~r~Lkp-gG~l~i~ 224 (294)
.......+.+.++. |+.++++
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEE
Confidence 12334555555554 4566654
No 404
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=49.57 E-value=39 Score=30.84 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=25.2
Q ss_pred CCccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 188 SSVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
..+|+|+-+.. ...+..+.++|++||.++++.
T Consensus 305 ~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 305 REPDIVFEHTG------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp SCCSEEEECSC------HHHHHHHHHHSCTTCEEEESC
T ss_pred CCceEEEECCC------chHHHHHHHHHhcCCEEEEEe
Confidence 35899887655 346788889999999999863
No 405
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=49.45 E-value=6.1 Score=35.20 Aligned_cols=81 Identities=17% Similarity=0.179 Sum_probs=47.2
Q ss_pred CCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCcEEE--------ccCCC---CCCCCCCccEEEEcccccCCCH
Q 022592 141 PSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSVIA--------CDMSN---TPLNSSSVDVAVFCLSLMGINF 204 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~~~~--------~d~~~---lp~~~~~fD~Vi~~~~l~~~~~ 204 (294)
++.+||-+|+|. |.++..++ .+|+++|.++.+..... .|..+ +.-..+.+|+|+-+..-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~----- 254 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV----- 254 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC-----
Confidence 677999999753 34444443 47899998874321110 11111 00001358998865432
Q ss_pred HHHHHHHHHhcCcCcEEEEEee
Q 022592 205 PNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+..+.++|+|+|.++++..
T Consensus 255 ~~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 255 HHALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCSHHHHTTEEEEEEEEECSC
T ss_pred hHHHHHHHHHhccCCEEEEeCC
Confidence 1235667789999999988643
No 406
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=48.24 E-value=24 Score=30.57 Aligned_cols=79 Identities=16% Similarity=0.139 Sum_probs=45.5
Q ss_pred CCCCEEEEEc-Cc-ccHHHHHhc----cceEEEeccCC-------CCc-EEEccCCC-CCCCCCCccEEEEcccccCCCH
Q 022592 140 SPSLVIADFG-CG-DARLAKSVK----NKVFSFDLVSN-------DPS-VIACDMSN-TPLNSSSVDVAVFCLSLMGINF 204 (294)
Q Consensus 140 ~~~~~VLDiG-cG-~G~~~~~l~----~~v~gvD~s~~-------~~~-~~~~d~~~-lp~~~~~fD~Vi~~~~l~~~~~ 204 (294)
.++.+||=+| +| .|.++..++ .+|++++-... ... ++..+-.+ +.-.-..+|+|+-+..
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g------ 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG------ 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC------
Confidence 4778999886 44 455555554 47777763321 111 12111111 1101135899886544
Q ss_pred HHHHHHHHHhcCcCcEEEEE
Q 022592 205 PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~ 224 (294)
...+..+.++|+++|.++.+
T Consensus 225 ~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 225 GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp HHHHHHHGGGEEEEEEEEEC
T ss_pred cHHHHHHHHhccCCCEEEEe
Confidence 33448899999999999886
No 407
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=47.44 E-value=77 Score=26.41 Aligned_cols=55 Identities=15% Similarity=0.302 Sum_probs=38.3
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC----CCCcEEEccCCCCC----CCCCCccEEEEcccc
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS----NDPSVIACDMSNTP----LNSSSVDVAVFCLSL 199 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~----~~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l 199 (294)
.+||=.|+ |.++..+. ..|++++.+. .++.++.+|+.+.. .-.+.+|+|+.+...
T Consensus 4 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~ 73 (286)
T 3gpi_A 4 SKILIAGC--GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAA 73 (286)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHH
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCC
Confidence 46888884 77766654 3789998775 46788999987632 112358999987654
No 408
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=47.20 E-value=7.9 Score=33.83 Aligned_cols=25 Identities=32% Similarity=0.646 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
...+|..+..+|+|||+|+|+.+++
T Consensus 212 L~~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHHHhcCCCEEEEEecCc
Confidence 5688999999999999999998764
No 409
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=47.06 E-value=12 Score=33.51 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=46.5
Q ss_pred CCCEEEEEcCcc-cHHHHHhc----cceEEEeccCCCCcE--------EEccCCC---CCCCCCCccEEEEcccccCCCH
Q 022592 141 PSLVIADFGCGD-ARLAKSVK----NKVFSFDLVSNDPSV--------IACDMSN---TPLNSSSVDVAVFCLSLMGINF 204 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~~~~~l~----~~v~gvD~s~~~~~~--------~~~d~~~---lp~~~~~fD~Vi~~~~l~~~~~ 204 (294)
++.+||=+|+|. |.++..++ .+|+++|.++.+... ...|..+ +.-..+.+|+|+.+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~---- 262 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAV---- 262 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcH----
Confidence 677899999753 34444443 478999987643211 1112211 000013589988764421
Q ss_pred HHHHHHHHHhcCcCcEEEEEe
Q 022592 205 PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e 225 (294)
..+..+.++|+++|.++.+.
T Consensus 263 -~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 263 -HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp -CCSHHHHHHEEEEEEEEECC
T ss_pred -HHHHHHHHHHhcCCEEEEEc
Confidence 13456778899999988864
No 410
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=47.04 E-value=19 Score=33.35 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=23.6
Q ss_pred CCEEEEEcCcccHHHHHhc----------cceEEEeccC
Q 022592 142 SLVIADFGCGDARLAKSVK----------NKVFSFDLVS 170 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~----------~~v~gvD~s~ 170 (294)
...|+|+|.|+|.++..+. ..++.|++|+
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp 176 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSG 176 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCH
Confidence 3589999999999877664 2588999987
No 411
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=44.21 E-value=9.1 Score=34.38 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
...+|..+..+|+|||+|+|+.+++
T Consensus 253 L~~~L~~a~~~L~~gGRl~VISFHS 277 (347)
T 3tka_A 253 IEQALKSSLNVLAPGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCc
Confidence 4578899999999999999998764
No 412
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=43.37 E-value=16 Score=32.22 Aligned_cols=31 Identities=3% Similarity=-0.031 Sum_probs=24.4
Q ss_pred CccEEEEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 189 SVDVAVFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.+|+|+-+.. ...+..+.++|+++|.++++.
T Consensus 233 g~D~vid~~g------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 233 QPRIFLDAVT------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCCEEEESSC------HHHHHHHHHHSCTTCEEEECC
T ss_pred CCcEEEECCC------ChhHHHHHhhhcCCCEEEEEe
Confidence 5899887655 334578889999999999875
No 413
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=43.23 E-value=12 Score=34.14 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=22.9
Q ss_pred CCEEEEEcCcccHHHHHhc------------cceEEEeccC
Q 022592 142 SLVIADFGCGDARLAKSVK------------NKVFSFDLVS 170 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~------------~~v~gvD~s~ 170 (294)
...|+|+|.|.|.++..+. -.++.||+|+
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp 121 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP 121 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH
Confidence 3479999999999876553 1678899987
No 414
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=42.77 E-value=92 Score=26.39 Aligned_cols=84 Identities=11% Similarity=0.016 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.+||=.|++.|. ++..|+ ..|+.+|.+. ..+.++.+|+.+.. +. -+.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45688888877664 233333 3788887764 25667888887632 10 136
Q ss_pred ccEEEEcccccCC-------CH--------------HHHHHHHHHhcCcCcEEEEE
Q 022592 190 VDVAVFCLSLMGI-------NF--------------PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 190 fD~Vi~~~~l~~~-------~~--------------~~~l~el~r~LkpgG~l~i~ 224 (294)
+|++|.+....+. +. ..+++.+.+.++.+|.++.+
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 8999987665321 11 23556677778888887765
No 415
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=41.81 E-value=98 Score=26.75 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=48.1
Q ss_pred CCCCEEEEEcCccc-HHHHHhc-----cceEEEeccCCCCcE-------EEccCCCCC--------CCCCCccEEEEccc
Q 022592 140 SPSLVIADFGCGDA-RLAKSVK-----NKVFSFDLVSNDPSV-------IACDMSNTP--------LNSSSVDVAVFCLS 198 (294)
Q Consensus 140 ~~~~~VLDiGcG~G-~~~~~l~-----~~v~gvD~s~~~~~~-------~~~d~~~lp--------~~~~~fD~Vi~~~~ 198 (294)
.++.+||=+|+|.. .++..++ ..++++|.++.+..+ ...|..+.. -....+|+|+-+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 46789999998753 3333333 256788988732211 111221111 01234777765432
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
-...+..+.++|++||.+++..
T Consensus 239 -----~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 239 -----VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp -----SHHHHHHHHHHCCTTCEEEECC
T ss_pred -----ccchhhhhhheecCCeEEEEEe
Confidence 2567888999999999999863
No 416
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=41.79 E-value=76 Score=25.92 Aligned_cols=83 Identities=12% Similarity=0.187 Sum_probs=51.0
Q ss_pred CCEEEEEcCcccH---HHHHhcc----ceEEEeccCC----CCcEEEccCCCCC--------CCCCCccEEEEcccccC-
Q 022592 142 SLVIADFGCGDAR---LAKSVKN----KVFSFDLVSN----DPSVIACDMSNTP--------LNSSSVDVAVFCLSLMG- 201 (294)
Q Consensus 142 ~~~VLDiGcG~G~---~~~~l~~----~v~gvD~s~~----~~~~~~~d~~~lp--------~~~~~fD~Vi~~~~l~~- 201 (294)
+.++|=.|++.|. ++..|+. .|+.+|.+.. .+.++.+|+.+.. ...+.+|++|.+..+..
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~ 83 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIK 83 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCC
Confidence 4468888887664 3334432 6777887653 4567888887632 22347899998887643
Q ss_pred -----CCH--------------HHHHHHHHHhcCcCcEEEEE
Q 022592 202 -----INF--------------PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 202 -----~~~--------------~~~l~el~r~LkpgG~l~i~ 224 (294)
.+. ..+++.+.+.++.+|.++.+
T Consensus 84 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~ 125 (244)
T 4e4y_A 84 GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFN 125 (244)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEE
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEE
Confidence 121 12344555666667777765
No 417
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=41.65 E-value=23 Score=31.14 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCc--ccHHHHHhc----cceEEEeccCC--------CCcEEEccCCCCC------CCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSN--------DPSVIACDMSNTP------LNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG--~G~~~~~l~----~~v~gvD~s~~--------~~~~~~~d~~~lp------~~~~~fD~Vi~~~~l 199 (294)
.++.+||-+|++ .|..+..++ .+|+++ .++. ....+. +-.++. .....+|+|+-+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g- 225 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG- 225 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC-
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC-
Confidence 467899999953 455555544 478887 5542 122221 111110 11236999887654
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+..+.++|+++|.++++.
T Consensus 226 -----~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 226 -----GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp -----THHHHHHHHHEEEEEEEEESC
T ss_pred -----cHHHHHHHHHHhcCCeEEEEc
Confidence 357888999999999998853
No 418
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=41.65 E-value=1.4e+02 Score=26.08 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=44.2
Q ss_pred cCCCCEEEEEcC--cccHHHHHhc----cceEEE-eccCC-----------CCc-EEEc------cCCCCCCCCCCccEE
Q 022592 139 HSPSLVIADFGC--GDARLAKSVK----NKVFSF-DLVSN-----------DPS-VIAC------DMSNTPLNSSSVDVA 193 (294)
Q Consensus 139 ~~~~~~VLDiGc--G~G~~~~~l~----~~v~gv-D~s~~-----------~~~-~~~~------d~~~lp~~~~~fD~V 193 (294)
..++.+||=+|+ |.|.++..++ ..++++ +..+. ... ++.. ++..+.-....+|+|
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvv 244 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLA 244 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEE
Confidence 347789999997 3566665554 245444 33221 111 2221 111111111148998
Q ss_pred EEcccccCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 194 VFCLSLMGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 194 i~~~~l~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
+-+.. ...+.++.++|++||.++++.
T Consensus 245 id~~g------~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 245 LNCVG------GKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp EESSC------HHHHHHHHTTSCTTCEEEECC
T ss_pred EECCC------cHHHHHHHHhhCCCCEEEEEe
Confidence 86543 223356789999999998863
No 419
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=41.49 E-value=1.1e+02 Score=24.58 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=39.1
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccC--------CCC-cEEEccCC-CCCCCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDP-SVIACDMS-NTPLNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--------~~~-~~~~~d~~-~lp~~~~~fD~Vi~~~~l~~ 201 (294)
.+.+||=.|+. |.++..++ ..|++++.++ .++ .++.+|+. .+.-.-+.+|+|+.+.....
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCT
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCC
Confidence 45688888854 44444433 3788888776 367 88999986 22211246899998877654
No 420
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=41.30 E-value=91 Score=27.52 Aligned_cols=80 Identities=9% Similarity=0.100 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCc--ccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCC-------CCCCCccEEEEcccc
Q 022592 140 SPSLVIADFGCG--DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTP-------LNSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGcG--~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp-------~~~~~fD~Vi~~~~l 199 (294)
.++.+||=+|++ .|.++..++ .+|+++. ++.+..+ ...|..... ...+.+|+|+-+..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g- 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT- 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC-
Confidence 367799999984 566666555 3677764 5532211 011211111 11234899886543
Q ss_pred cCCCHHHHHHHHHHhc-CcCcEEEEEe
Q 022592 200 MGINFPNYLQEAQRVL-KPSGWLLIAE 225 (294)
Q Consensus 200 ~~~~~~~~l~el~r~L-kpgG~l~i~e 225 (294)
-...+..+.++| ++||.++++.
T Consensus 241 ----~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 241 ----NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ----SHHHHHHHHHHSCTTCEEEEESS
T ss_pred ----chHHHHHHHHHhhcCCCEEEEEe
Confidence 246788888889 6999998853
No 421
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=41.10 E-value=36 Score=29.88 Aligned_cols=78 Identities=12% Similarity=0.187 Sum_probs=47.4
Q ss_pred CCCEEEEEc-Cc-ccHHHHHhc----cceEEEeccCCCC--------cEEEccCCC-C-----CCCCCCccEEEEccccc
Q 022592 141 PSLVIADFG-CG-DARLAKSVK----NKVFSFDLVSNDP--------SVIACDMSN-T-----PLNSSSVDVAVFCLSLM 200 (294)
Q Consensus 141 ~~~~VLDiG-cG-~G~~~~~l~----~~v~gvD~s~~~~--------~~~~~d~~~-l-----p~~~~~fD~Vi~~~~l~ 200 (294)
++.+||=+| +| .|.++..++ .+|+++|.++.+. ..+. |... + ......+|+|+-+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~g~Dvv~d~~g-- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVL-NHKESLLNQFKTQGIELVDYVFCTFN-- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEE-CTTSCHHHHHHHHTCCCEEEEEESSC--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE-ECCccHHHHHHHhCCCCccEEEECCC--
Confidence 577899885 43 344444444 4899998866321 1111 1111 0 011246899886533
Q ss_pred CCCHHHHHHHHHHhcCcCcEEEEE
Q 022592 201 GINFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 201 ~~~~~~~l~el~r~LkpgG~l~i~ 224 (294)
-...+..+.++|+++|.++.+
T Consensus 227 ---~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 ---TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEES
T ss_pred ---chHHHHHHHHHhccCCEEEEE
Confidence 356778999999999999764
No 422
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.77 E-value=1.3e+02 Score=23.56 Aligned_cols=80 Identities=20% Similarity=0.199 Sum_probs=47.6
Q ss_pred EEEEEcCcccHHHHHhc-------cceEEEeccC-------CCCcEEEccCCCCCC-CCCCccEEEEcccccCC---CHH
Q 022592 144 VIADFGCGDARLAKSVK-------NKVFSFDLVS-------NDPSVIACDMSNTPL-NSSSVDVAVFCLSLMGI---NFP 205 (294)
Q Consensus 144 ~VLDiGcG~G~~~~~l~-------~~v~gvD~s~-------~~~~~~~~d~~~lp~-~~~~fD~Vi~~~~l~~~---~~~ 205 (294)
+||=+|+ +|.++..+. ..|++++.++ .++.++.+|+.+... .-..+|+|+.+...... ...
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 5676664 455444443 3788888776 478889999876431 11358999988776432 122
Q ss_pred HHHHHHHHhcCc--CcEEEEE
Q 022592 206 NYLQEAQRVLKP--SGWLLIA 224 (294)
Q Consensus 206 ~~l~el~r~Lkp--gG~l~i~ 224 (294)
.....+.+.++. .+.++++
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEE
T ss_pred HHHHHHHHHHHhcCCceEEEE
Confidence 344445555544 3566654
No 423
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=40.09 E-value=1.1e+02 Score=25.50 Aligned_cols=84 Identities=15% Similarity=0.199 Sum_probs=52.9
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC--------------------------CCCcEEEccCCCCC----
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS--------------------------NDPSVIACDMSNTP---- 184 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~--------------------------~~~~~~~~d~~~lp---- 184 (294)
.+.+||=.|++.|. ++..|+ ..|+.+|.+. .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 45678888887664 233333 3788888761 24567888887632
Q ss_pred -CC-----CCCccEEEEcccccCC----C--------------HHHHHHHHHHhcCcCcEEEEE
Q 022592 185 -LN-----SSSVDVAVFCLSLMGI----N--------------FPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 185 -~~-----~~~fD~Vi~~~~l~~~----~--------------~~~~l~el~r~LkpgG~l~i~ 224 (294)
+. -+.+|++|.+..+... + ...+++.+...++.+|.++.+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 00 1368999988776431 1 123456667777788887775
No 424
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=39.61 E-value=88 Score=28.47 Aligned_cols=78 Identities=14% Similarity=0.108 Sum_probs=49.6
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC--------CCCcEEEccCCCCC----CCCCCccEEEEcccccCCC
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS--------NDPSVIACDMSNTP----LNSSSVDVAVFCLSLMGIN 203 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--------~~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l~~~~ 203 (294)
.+|+=+|+| .++..++ ..|+++|.++ ..+.++.+|+.+.. ..-..+|+|++... ...
T Consensus 5 ~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~--~~~ 80 (413)
T 3l9w_A 5 MRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID--DPQ 80 (413)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS--SHH
T ss_pred CeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC--ChH
Confidence 468888875 4444443 3799999887 35678889987632 22356898887543 112
Q ss_pred HHHHHHHHHHhcCcCcEEEEE
Q 022592 204 FPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~ 224 (294)
....+-.+.+.+.|...+++-
T Consensus 81 ~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 81 TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp HHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEE
Confidence 234455667778888777764
No 425
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=39.35 E-value=1.4e+02 Score=24.48 Aligned_cols=85 Identities=15% Similarity=0.286 Sum_probs=53.4
Q ss_pred CCCEEEEEcCc--ccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCCC-----C-----C
Q 022592 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTPL-----N-----S 187 (294)
Q Consensus 141 ~~~~VLDiGcG--~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp~-----~-----~ 187 (294)
.+.++|=.|++ .|. ++..|+ .+|+.++.+. .++.++.+|+.+..- . -
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45678888876 444 334443 3788887654 157888999877430 0 1
Q ss_pred CCccEEEEcccccC----------CCHH--------------HHHHHHHHhcCcCcEEEEEe
Q 022592 188 SSVDVAVFCLSLMG----------INFP--------------NYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~----------~~~~--------------~~l~el~r~LkpgG~l~i~e 225 (294)
+.+|+++.+..+.. .+.. .+++.+...++++|.++.+.
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 36899998776542 1221 24566677788888877764
No 426
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.44 E-value=1.3e+02 Score=25.15 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.++|=.|++.|. ++..|+ ..|+.++... ..+.++.+|+.+.. +. -+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45688888887664 233343 3677776543 35567888887632 00 136
Q ss_pred ccEEEEcccccCC------C--------------HHHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMGI------N--------------FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~~------~--------------~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+... + ...+++.+.+.++.+|.++.+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 8999988776431 1 1235666777888888877753
No 427
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=38.32 E-value=30 Score=30.81 Aligned_cols=81 Identities=9% Similarity=-0.030 Sum_probs=46.5
Q ss_pred CCCCEEEEEcC-c-ccHHHHHhc----cceEEEeccCCCCcE-------EEccCCCCCC-----CCCCccEEEEcccccC
Q 022592 140 SPSLVIADFGC-G-DARLAKSVK----NKVFSFDLVSNDPSV-------IACDMSNTPL-----NSSSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGc-G-~G~~~~~l~----~~v~gvD~s~~~~~~-------~~~d~~~lp~-----~~~~fD~Vi~~~~l~~ 201 (294)
.++.+||=+|+ | .|..+..++ .+|++++ ++.+..+ ...|..+..+ ....+|+|+-+..-
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~-- 258 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-- 258 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT--
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC--
Confidence 36779999993 3 455555544 4788887 5422111 1112211110 11358998865442
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
....+....++|++||.++++.
T Consensus 259 --~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 259 --STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp --THHHHGGGGBCSSSCCEEEESC
T ss_pred --hhhhhHHHHHhhcCCcEEEEeC
Confidence 1245677888999999998753
No 428
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=38.31 E-value=1.1e+02 Score=22.00 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=42.8
Q ss_pred CCEEEEEcCcccHHHHHhc-------cceEEEeccCC---------CCcEEEccCCCCC----CCCCCccEEEEcccccC
Q 022592 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVSN---------DPSVIACDMSNTP----LNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~---------~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l~~ 201 (294)
+.+|+=+|+| .++..++ ..|+++|.++. .+.++.+|..+.. .....+|+|+.+....
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~- 80 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE- 80 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-
Confidence 3578888875 4443332 36889998752 4445666664321 1124589988774321
Q ss_pred CCHHHHHHHHHHhcCcCcEEEE
Q 022592 202 INFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i 223 (294)
.....+..+.+.+.++ .+++
T Consensus 81 -~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 81 -EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp -HHHHHHHHHHHHTTCC-CEEE
T ss_pred -hHHHHHHHHHHHcCCC-EEEE
Confidence 1223455566667775 4443
No 429
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=37.35 E-value=41 Score=22.20 Aligned_cols=21 Identities=19% Similarity=0.420 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHCCCeEEEEe
Q 022592 237 ADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 237 ~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
++..++.++|++.||..+...
T Consensus 5 ~~~~elik~L~~~G~~~~r~~ 25 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMAK 25 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCCC
Confidence 467899999999999987653
No 430
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=36.41 E-value=50 Score=27.45 Aligned_cols=85 Identities=7% Similarity=0.060 Sum_probs=53.2
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC-----------CCCcEEEccCCCCCC----------CCCCccEE
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTPL----------NSSSVDVA 193 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp~----------~~~~fD~V 193 (294)
.+.++|=.|++.|. ++..|+ .+|+.+|.+. .++.++.+|+.+..- .-+.+|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45678888877664 233333 3788888765 256678888876421 01468999
Q ss_pred EEcccccCC------CH--------------HHHHHHHHHhcCcCcEEEEEe
Q 022592 194 VFCLSLMGI------NF--------------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 194 i~~~~l~~~------~~--------------~~~l~el~r~LkpgG~l~i~e 225 (294)
+.+..+... +. ..+++.+...++.+|.++.+.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 988766431 11 124556666777788877753
No 431
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=36.03 E-value=1e+02 Score=25.70 Aligned_cols=85 Identities=22% Similarity=0.231 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.++|=.|++.|. ++..|+ ..|+.++... .++.++.+|+.+.. +. -+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45678888876654 233333 3677766543 35678888887632 00 136
Q ss_pred ccEEEEcccccCC------CH--------------HHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMGI------NF--------------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~~------~~--------------~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+... +. ..+++.+.+.++.+|.++++.
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 8999988776431 11 234567778888888887754
No 432
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=34.66 E-value=13 Score=32.56 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhcCcCcEEEEEeecC
Q 022592 204 FPNYLQEAQRVLKPSGWLLIAEVKS 228 (294)
Q Consensus 204 ~~~~l~el~r~LkpgG~l~i~e~~~ 228 (294)
...+|..+..+|+|||.+.|+.+++
T Consensus 224 l~~~l~~~~~~l~~ggr~~visfhs 248 (301)
T 1m6y_A 224 LKEFLKKAEDLLNPGGRIVVISFHS 248 (301)
T ss_dssp HHHHHHHGGGGEEEEEEEEEEESSH
T ss_pred HHHHHHHHHHhhCCCCEEEEEecCc
Confidence 4688999999999999999998764
No 433
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=34.09 E-value=67 Score=27.59 Aligned_cols=59 Identities=10% Similarity=0.125 Sum_probs=37.5
Q ss_pred CCEEEEEcCcccHHHHHhc-------cceEEEeccC----------CCCcEEEccCCCCC-----CCCCCccEEEEcccc
Q 022592 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVS----------NDPSVIACDMSNTP-----LNSSSVDVAVFCLSL 199 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~----------~~~~~~~~d~~~lp-----~~~~~fD~Vi~~~~l 199 (294)
+.+||=.| |+|.++..++ ..|++++.+. .++.++.+|+.+.. +....+|+||.+...
T Consensus 21 ~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 21 MKKVFITG-ICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 45788777 4566555543 3788888654 24567888887632 112248999988776
Q ss_pred cC
Q 022592 200 MG 201 (294)
Q Consensus 200 ~~ 201 (294)
..
T Consensus 100 ~~ 101 (333)
T 2q1w_A 100 YK 101 (333)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 434
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=32.91 E-value=30 Score=30.04 Aligned_cols=65 Identities=18% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCCCCCccEEEEcccc----cCC----C----HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCC
Q 022592 184 PLNSSSVDVAVFCLSL----MGI----N----FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGF 251 (294)
Q Consensus 184 p~~~~~fD~Vi~~~~l----~~~----~----~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf 251 (294)
|-.-+.||+|+.+-.- ||. | ...+-..+.++|+|||.+++....-. ....+.+...+.+ -|
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA------DR~SE~vV~alAR-kF 278 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA------DRTSERVICVLGR-KF 278 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC------SHHHHHHHHHHHT-TE
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc------ccchHHHHHHHHh-hh
Confidence 3334789999986443 231 1 22344566789999999999642210 1123555555544 46
Q ss_pred eEEE
Q 022592 252 APVS 255 (294)
Q Consensus 252 ~~~~ 255 (294)
.-+.
T Consensus 279 ~~~r 282 (324)
T 3trk_A 279 RSSR 282 (324)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5554
No 435
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=32.90 E-value=39 Score=33.77 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=48.6
Q ss_pred CCCCEEEEEcC--cccHHHHHhc----cceEEEeccCCCCcEE------EccCCCCCC--------CCCCccEEEEcccc
Q 022592 140 SPSLVIADFGC--GDARLAKSVK----NKVFSFDLVSNDPSVI------ACDMSNTPL--------NSSSVDVAVFCLSL 199 (294)
Q Consensus 140 ~~~~~VLDiGc--G~G~~~~~l~----~~v~gvD~s~~~~~~~------~~d~~~lp~--------~~~~fD~Vi~~~~l 199 (294)
.++.+||=.|+ |.|..+..++ .+|++++.+. ...+. ..|.....+ ....+|+|+-+..
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g- 421 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLA- 421 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCC-
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-HhhhhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECCC-
Confidence 46778999985 4566666555 4888887554 21111 011111111 1235999987544
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
...+....++|+|+|.++.+.
T Consensus 422 -----g~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 422 -----GEFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp -----TTTTHHHHTSCTTCEEEEECC
T ss_pred -----cHHHHHHHHHhcCCCEEEEec
Confidence 245678889999999999864
No 436
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=32.88 E-value=2.1e+02 Score=25.32 Aligned_cols=79 Identities=9% Similarity=0.095 Sum_probs=44.0
Q ss_pred CCCEEEEEcCcccHHH--HHhc---c-ceEEEeccCC-------CCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHH
Q 022592 141 PSLVIADFGCGDARLA--KSVK---N-KVFSFDLVSN-------DPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNY 207 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~--~~l~---~-~v~gvD~s~~-------~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~ 207 (294)
.+.+|+-.|+|..... ..+. . -...+|.++. ..++-+...+.+ .....|.|+... +.-..+.
T Consensus 318 ~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~~--~~~~~d~vl~~~---~~~~~ei 392 (416)
T 4e2x_A 318 EGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASAF--SDPYPDYALLFA---WNHAEEI 392 (416)
T ss_dssp TTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGGC--CSSCCSEEEESC---GGGHHHH
T ss_pred cCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHHHH--hhcCCCEEEEec---chhHHHH
Confidence 4568999999874332 2222 1 3346787772 212222222222 234578766431 1124667
Q ss_pred HHHHHHhcCcCcEEEEE
Q 022592 208 LQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 208 l~el~r~LkpgG~l~i~ 224 (294)
++.+...+..||.+++.
T Consensus 393 ~~~~~~~~~~g~~~~~~ 409 (416)
T 4e2x_A 393 MAKEQEFHQAGGRWILY 409 (416)
T ss_dssp HHHCHHHHHTTCEEEEC
T ss_pred HHHHHHHHhcCCEEEEE
Confidence 77777788889999874
No 437
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=31.96 E-value=17 Score=24.69 Aligned_cols=61 Identities=10% Similarity=-0.085 Sum_probs=37.9
Q ss_pred ccCCCHHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEEEeccCCeEEEEE
Q 022592 199 LMGINFPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVSKDFSNKMFIMFY 267 (294)
Q Consensus 199 l~~~~~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~f~~i~ 267 (294)
+..+-|.--.....+-|.+|..|.+.--. ..+..++..++++.|+++.........|.+++
T Consensus 14 l~CP~Pvl~~k~al~~l~~G~~L~V~~dd--------~~a~~di~~~~~~~G~~~~~~~~~~~~~~i~I 74 (78)
T 1pav_A 14 SYCPGPLMELIKAYKQAKVGEVISVYSTD--------AGTKKDAPAWIQKSGQELVGVFDRNGYYEIVM 74 (78)
T ss_dssp CSSCTTHHHHHHHHTTSCTTCCEECCBSS--------SCHHHHHHHHHHHHTEEECCCCCCSSCBCCEE
T ss_pred CCCCHHHHHHHHHHHcCCCCCEEEEEECC--------ccHHHHHHHHHHHCCCEEEEEEEeCCEEEEEE
Confidence 33344444455566678899877664211 12458899999999999876544455554443
No 438
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=31.94 E-value=79 Score=27.13 Aligned_cols=60 Identities=17% Similarity=0.232 Sum_probs=37.2
Q ss_pred CCCEEEEEcCcccHHHHHhc---------cceEEEeccC--------------CCCcEEEccCCCCC-----CCCCCccE
Q 022592 141 PSLVIADFGCGDARLAKSVK---------NKVFSFDLVS--------------NDPSVIACDMSNTP-----LNSSSVDV 192 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---------~~v~gvD~s~--------------~~~~~~~~d~~~lp-----~~~~~fD~ 192 (294)
.+.+||=.| |+|.++..++ ..|+++|... .++.++.+|+.+.. +....+|+
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 345788777 4566655553 1567777653 35678889987632 11224899
Q ss_pred EEEcccccC
Q 022592 193 AVFCLSLMG 201 (294)
Q Consensus 193 Vi~~~~l~~ 201 (294)
||.+.....
T Consensus 102 Vih~A~~~~ 110 (346)
T 4egb_A 102 IVNFAAESH 110 (346)
T ss_dssp EEECCCCC-
T ss_pred EEECCcccc
Confidence 998877653
No 439
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=31.60 E-value=1.6e+02 Score=21.98 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=41.8
Q ss_pred CCCCEEEEEcCcc-cHH-HHHhc---cceEEEeccCC---------CCcEEEccCCCCC----CCCCCccEEEEcccccC
Q 022592 140 SPSLVIADFGCGD-ARL-AKSVK---NKVFSFDLVSN---------DPSVIACDMSNTP----LNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 140 ~~~~~VLDiGcG~-G~~-~~~l~---~~v~gvD~s~~---------~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l~~ 201 (294)
.++.+|+=+|||. |.. +..|. ..|+++|.++. ...++.+|..+.. ..-..+|+|+.+..-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~-- 94 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND-- 94 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC--
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC--
Confidence 3567899999864 322 22222 37899998762 2334555543311 112358888876431
Q ss_pred CCHHHHHHHHHHhcCcCcEEEE
Q 022592 202 INFPNYLQEAQRVLKPSGWLLI 223 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i 223 (294)
......+..+.+.+.|...++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 95 DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEE
T ss_pred cHHHHHHHHHHHHHCCCCeEEE
Confidence 1112333344444455445444
No 440
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=31.56 E-value=1.5e+02 Score=25.52 Aligned_cols=113 Identities=10% Similarity=0.049 Sum_probs=61.2
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC---------------CCCcEEEccCCCCC-----CCCCCccEEEE
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS---------------NDPSVIACDMSNTP-----LNSSSVDVAVF 195 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~~~~fD~Vi~ 195 (294)
.+||=+|+ +|.++..+. ..|++++.++ .++.++.+|+.+.. +....+|+||+
T Consensus 11 ~~IlVtGa-tG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 11 GRVLIAGA-TGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp CCEEEECT-TSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEECC-CcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 46887775 566655543 3788888765 46788999997632 22226899998
Q ss_pred cccccCCC-HHHHHHHHHHhcCcCcEEEEEeecCCCCCCCCC-------CCHHHHHHHHHHCCCeEEEEe
Q 022592 196 CLSLMGIN-FPNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGG-------ADPNKFSKAVCDLGFAPVSKD 257 (294)
Q Consensus 196 ~~~l~~~~-~~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~-------~~~~~~~~~l~~~Gf~~~~~~ 257 (294)
+....... ...+++.+.+. ..-..++.+.+.......... .+....+.++++.|+..+.+.
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~-g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivr 158 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAV-GTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYIC 158 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHH-CCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEE
T ss_pred CCchhhHHHHHHHHHHHHHc-CCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCEEEEE
Confidence 87765432 23333333322 111244443222111111110 123355677888888666543
No 441
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=31.17 E-value=1.2e+02 Score=25.87 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=39.7
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccC--CCCcEEEccCCCCC-C--CCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVS--NDPSVIACDMSNTP-L--NSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~--~~~~~~~~d~~~lp-~--~~~~fD~Vi~~~~l~~ 201 (294)
.+.+||=.| |+|.++..++ ..|++++.+. .++.++.+|+.+.. + .-..+|+|+.+.....
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~ 89 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS 89 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence 345788777 4566665554 3799998876 46889999987632 0 0136899998877654
No 442
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=30.72 E-value=1e+02 Score=26.33 Aligned_cols=84 Identities=15% Similarity=0.125 Sum_probs=55.5
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC-----------CCCcEEEccCCCCC----------CCCCCccEE
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTP----------LNSSSVDVA 193 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp----------~~~~~fD~V 193 (294)
.+.++|=-|++.|. .+..|+ ..|+.+|.+. .....+.+|+.+.. -.-+..|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56678888888775 333444 4888888875 35667888887632 012578999
Q ss_pred EEcccccCC------C---H-----------HHHHHHHHHhcCcCcEEEEE
Q 022592 194 VFCLSLMGI------N---F-----------PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 194 i~~~~l~~~------~---~-----------~~~l~el~r~LkpgG~l~i~ 224 (294)
|.+...... + + -...+.+.+.++.+|.++.+
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 988776531 1 1 23556677788888877665
No 443
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=30.06 E-value=13 Score=33.42 Aligned_cols=83 Identities=8% Similarity=0.078 Sum_probs=43.6
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccCCCCcE--------EEccCCC---CCCCCCCccEEEEcccccC-
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPSV--------IACDMSN---TPLNSSSVDVAVFCLSLMG- 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~~~~~--------~~~d~~~---lp~~~~~fD~Vi~~~~l~~- 201 (294)
.+.+|+=+|+| ..+..++ .+|+++|.++..... +..|... +.-.-..+|+|+.+.....
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 45789999985 3333222 389999987632110 1111111 1000125799987655432
Q ss_pred CCHHHHHHHHHHhcCcCcEEEEEe
Q 022592 202 INFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 ~~~~~~l~el~r~LkpgG~l~i~e 225 (294)
..+.-+.+++.+.+++||.++.+.
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC
T ss_pred ccchhHHHHHHHhhcCCCEEEEEe
Confidence 111123466778899999877653
No 444
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=29.78 E-value=9.1 Score=19.87 Aligned_cols=10 Identities=60% Similarity=1.039 Sum_probs=5.0
Q ss_pred hHHHhhhccc
Q 022592 7 RKRKRRRRHN 16 (294)
Q Consensus 7 ~~~~~~~~~~ 16 (294)
|||++|||.+
T Consensus 2 rkrpkrkrkn 11 (26)
T 4g9j_C 2 RKRPKRKRKN 11 (26)
T ss_pred Cccccccccc
Confidence 4555555443
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=29.66 E-value=16 Score=32.94 Aligned_cols=83 Identities=11% Similarity=0.053 Sum_probs=44.3
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccCCCCcEE-----------EccCCCCCCCCCCccEEEEcccccCC
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPSVI-----------ACDMSNTPLNSSSVDVAVFCLSLMGI 202 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~~~~~~-----------~~d~~~lp~~~~~fD~Vi~~~~l~~~ 202 (294)
++.+|+=+|+|. .+..++ ..|+++|.++...... ..+..++.-.-..+|+|+.+......
T Consensus 167 ~g~~V~ViG~G~--iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 167 EPADVVVIGAGT--AGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CCCEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCEEEEECCCH--HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 567999999853 333222 3799999876321110 00000110001247999875433221
Q ss_pred -CHHHHHHHHHHhcCcCcEEEEEe
Q 022592 203 -NFPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 203 -~~~~~l~el~r~LkpgG~l~i~e 225 (294)
.+.-+.+++.+.++|||.++.+-
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEe
Confidence 11122456778899999887653
No 446
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=29.40 E-value=3.4e+02 Score=24.96 Aligned_cols=58 Identities=17% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCEEEEEcCcccHHHHHhc-------cceEEEeccCCCCcEEEccCCCCC-CCCCCccEEEEccccc
Q 022592 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPSVIACDMSNTP-LNSSSVDVAVFCLSLM 200 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~~~~~~~~d~~~lp-~~~~~fD~Vi~~~~l~ 200 (294)
.++||=.| |+|.++..+. ..|++++-+......+.+|+.+.. -.-..+|+||.+....
T Consensus 147 ~m~VLVTG-atG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~~ 212 (516)
T 3oh8_A 147 PLTVAITG-SRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGEP 212 (516)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCCc
Confidence 56888777 4566665553 379999998877777777775421 1124689999877654
No 447
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.20 E-value=54 Score=28.19 Aligned_cols=78 Identities=13% Similarity=0.127 Sum_probs=43.9
Q ss_pred CCCCEEEEEcCcccHHHHHhc-------cceEEEeccCCCCc------EEEccCCCCCCCCCCccEEEEcccccCCCHHH
Q 022592 140 SPSLVIADFGCGDARLAKSVK-------NKVFSFDLVSNDPS------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (294)
Q Consensus 140 ~~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~~~~------~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~ 206 (294)
..+.+|+=||+|. .+..++ .+|+++|.+..... ....+..++.-.-..+|+|+....++..+.
T Consensus 155 l~g~~v~IiG~G~--iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~-- 230 (300)
T 2rir_A 155 IHGSQVAVLGLGR--TGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILNQ-- 230 (300)
T ss_dssp STTSEEEEECCSH--HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBCH--
T ss_pred CCCCEEEEEcccH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhCH--
Confidence 3677999999864 333222 37899998763211 111111111111245899998777643342
Q ss_pred HHHHHHHhcCcCcEEEEE
Q 022592 207 YLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~i~ 224 (294)
+....++||+.++-+
T Consensus 231 ---~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 231 ---TVLSSMTPKTLILDL 245 (300)
T ss_dssp ---HHHTTSCTTCEEEEC
T ss_pred ---HHHHhCCCCCEEEEE
Confidence 245678998866543
No 448
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=28.84 E-value=52 Score=28.79 Aligned_cols=80 Identities=14% Similarity=0.199 Sum_probs=42.3
Q ss_pred CCCCEEEEEcCc--ccHHHHHhc-----cceEEEeccCCCC-------cEEEccCCCCC-----CCCCCccEEEEccccc
Q 022592 140 SPSLVIADFGCG--DARLAKSVK-----NKVFSFDLVSNDP-------SVIACDMSNTP-----LNSSSVDVAVFCLSLM 200 (294)
Q Consensus 140 ~~~~~VLDiGcG--~G~~~~~l~-----~~v~gvD~s~~~~-------~~~~~d~~~lp-----~~~~~fD~Vi~~~~l~ 200 (294)
.++.+||=+|++ .|.++..++ ..|++++ ++.+. ..+...-.++. ...+.+|+|+-+..
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~g~Dvv~d~~g-- 217 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLC-- 217 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHGGGSSEEEETTSCHHHHHHHHCTTCEEEEEEECC--
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHcCCcEEEcCCccHHHHHHHhcCCCceEEEECCC--
Confidence 467899999983 355555554 2677776 33211 11111111100 11346999886543
Q ss_pred CCCHHHHHHHHHHhcCcCcEEEEEee
Q 022592 201 GINFPNYLQEAQRVLKPSGWLLIAEV 226 (294)
Q Consensus 201 ~~~~~~~l~el~r~LkpgG~l~i~e~ 226 (294)
...+..+.++|+++|.++++..
T Consensus 218 ----~~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 218 ----GDNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp -----------CTTEEEEEEEEEEC-
T ss_pred ----chhHHHHHHHhhcCCEEEEECC
Confidence 2234678899999999998753
No 449
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=27.83 E-value=2.3e+02 Score=23.16 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=35.8
Q ss_pred CCEEEEEcCcc-cHHHHH----hc---cceEEEeccC-------------CCCcEEEccCCCCC----------CCCCCc
Q 022592 142 SLVIADFGCGD-ARLAKS----VK---NKVFSFDLVS-------------NDPSVIACDMSNTP----------LNSSSV 190 (294)
Q Consensus 142 ~~~VLDiGcG~-G~~~~~----l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp----------~~~~~f 190 (294)
+.+||=.|++. |.++.. |+ ..|+.+|.+. ....++.+|+.+.. -.-+.+
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45788888751 333333 33 3788887664 23467888887632 011368
Q ss_pred cEEEEccccc
Q 022592 191 DVAVFCLSLM 200 (294)
Q Consensus 191 D~Vi~~~~l~ 200 (294)
|++|.+..+.
T Consensus 89 D~lv~~Ag~~ 98 (265)
T 1qsg_A 89 DGFVHSIGFA 98 (265)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999887654
No 450
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=26.92 E-value=1.5e+02 Score=25.10 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC----------------CCCcEEEccCCCCC-----CC-----CC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS----------------NDPSVIACDMSNTP-----LN-----SS 188 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~----------------~~~~~~~~d~~~lp-----~~-----~~ 188 (294)
.+.++|=.|++.|. ++..|+ ..|+.+|.+. .++.++.+|+.+.. +. -+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678888877664 233333 3677777652 24566778886632 00 14
Q ss_pred CccEEEEcccccC-------CCH--------------HHHHHHHHHhcCcCcEEEEEe
Q 022592 189 SVDVAVFCLSLMG-------INF--------------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 189 ~fD~Vi~~~~l~~-------~~~--------------~~~l~el~r~LkpgG~l~i~e 225 (294)
.+|++|.+..... .+. ..+++.+...++.+|.++.+.
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 6899998877632 111 135566677788888887764
No 451
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=26.84 E-value=1.2e+02 Score=25.10 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC-----------------CCCcEEEccCCCCC-----CC-----C
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------------NDPSVIACDMSNTP-----LN-----S 187 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~-----------------~~~~~~~~d~~~lp-----~~-----~ 187 (294)
.+.++|=.|++.|. ++..|+ ..|+.++.+. .++.++.+|+.+.. +. -
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45678888887664 333444 3677776542 24567888887632 00 1
Q ss_pred CCccEEEEcccccCC------CH--------------HHHHHHHHHhcCcCcEEEEE
Q 022592 188 SSVDVAVFCLSLMGI------NF--------------PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 188 ~~fD~Vi~~~~l~~~------~~--------------~~~l~el~r~LkpgG~l~i~ 224 (294)
+.+|++|.+..+... +. ..+++.+.+.++++|.++++
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 468999988776431 11 13455556666777877775
No 452
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=26.45 E-value=18 Score=31.55 Aligned_cols=105 Identities=10% Similarity=-0.019 Sum_probs=58.7
Q ss_pred CCCEEEEEcCcc-cH-HHHHhc---cceEEEeccCCCCcEEEccCCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHhc
Q 022592 141 PSLVIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDMSNTPLNSSSVDVAVFCLSLMGINFPNYLQEAQRVL 215 (294)
Q Consensus 141 ~~~~VLDiGcG~-G~-~~~~l~---~~v~gvD~s~~~~~~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~~l~el~r~L 215 (294)
.+.+|.=||+|. |. ++..+. .+|+++|.+........ ...++..--...|+|+.+..+......-+-.+....|
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m 199 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDV-ISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA 199 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSE-ECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccccc-ccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhh
Confidence 567899999874 22 233332 38999998875433211 0111110013579998876653211111224667889
Q ss_pred CcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeE
Q 022592 216 KPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAP 253 (294)
Q Consensus 216 kpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 253 (294)
+||.+|+-+.-. ...+.+.+.+.|++.+..-
T Consensus 200 k~gailIN~aRG-------~~vd~~aL~~aL~~g~i~g 230 (290)
T 3gvx_A 200 RKNLTIVNVARA-------DVVSKPDMIGFLKERSDVW 230 (290)
T ss_dssp CTTCEEEECSCG-------GGBCHHHHHHHHHHCTTCE
T ss_pred hcCceEEEeehh-------cccCCcchhhhhhhccceE
Confidence 999877653211 1135688888888765443
No 453
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=25.63 E-value=2.6e+02 Score=23.43 Aligned_cols=85 Identities=12% Similarity=0.167 Sum_probs=53.2
Q ss_pred CCCEEEEEcCcc--cH---HHHHhc---cceEEEeccC-------------CCCcEEEccCCCCC-----C-----CCCC
Q 022592 141 PSLVIADFGCGD--AR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----L-----NSSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~--G~---~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp-----~-----~~~~ 189 (294)
.+.++|=.|++. |. ++..|+ ..|+.++.+. ..+.++.+|+.+.. + .-+.
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456888888763 33 334444 3688887663 35667888887632 0 0146
Q ss_pred ccEEEEcccccC----------CC--------------HHHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMG----------IN--------------FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~----------~~--------------~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+.. .+ ...+++.+.+.++.+|.++.+.
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 899998877542 11 1235566677777888887764
No 454
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.43 E-value=1.1e+02 Score=25.42 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=44.6
Q ss_pred EEEEEcCcc-cH-HHHHhc---cceEEEeccCCCCcEEEccC-----------CCCCCCCCCccEEEEcccccCCCHHHH
Q 022592 144 VIADFGCGD-AR-LAKSVK---NKVFSFDLVSNDPSVIACDM-----------SNTPLNSSSVDVAVFCLSLMGINFPNY 207 (294)
Q Consensus 144 ~VLDiGcG~-G~-~~~~l~---~~v~gvD~s~~~~~~~~~d~-----------~~lp~~~~~fD~Vi~~~~l~~~~~~~~ 207 (294)
+|.=||+|. |. ++..|. ..|+++|.++....-+...- ...+-.-..+|+|+.+-.-. ....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~--~~~~v 79 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW--QVSDA 79 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG--GHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH--hHHHH
Confidence 577788874 22 333333 37888988775443221110 00010012478888764433 35678
Q ss_pred HHHHHHhcCcCcEEEEE
Q 022592 208 LQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 208 l~el~r~LkpgG~l~i~ 224 (294)
+..+...++|+..++..
T Consensus 80 ~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 80 VKSLASTLPVTTPILLI 96 (291)
T ss_dssp HHHHHTTSCTTSCEEEE
T ss_pred HHHHHhhCCCCCEEEEe
Confidence 88888888888765554
No 455
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=25.32 E-value=2.1e+02 Score=23.36 Aligned_cols=85 Identities=20% Similarity=0.228 Sum_probs=52.2
Q ss_pred CCCEEEEEcCc--ccH---HHHHhc---cceEEEeccC-------------CCCcEEEccCCCCC-----C-----CCCC
Q 022592 141 PSLVIADFGCG--DAR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----L-----NSSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG--~G~---~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp-----~-----~~~~ 189 (294)
.+.+||=.|++ .|. ++..|+ ..|+.++.+. ..+.++.+|+.+.. + .-+.
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45688988875 443 233333 3788887664 24678899987632 0 0146
Q ss_pred ccEEEEcccccC-----------CC--------------HHHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMG-----------IN--------------FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~-----------~~--------------~~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+.. .+ ...+++.+.+.++++|.++.+.
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 899998876542 11 1134555666777788777654
No 456
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=24.65 E-value=66 Score=30.93 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=28.1
Q ss_pred CCCCCCCccEEEEcccc----cCC----C----HHHHHHHHHHhcCcCcEEEEEe
Q 022592 183 TPLNSSSVDVAVFCLSL----MGI----N----FPNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 183 lp~~~~~fD~Vi~~~~l----~~~----~----~~~~l~el~r~LkpgG~l~i~e 225 (294)
+| +.+.||+|+.+-.- ||. | ...+-..+.++|+|||.+++..
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~ 269 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKS 269 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEE
Confidence 44 35789999976432 331 1 2244556778999999999864
No 457
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.43 E-value=1.8e+02 Score=24.10 Aligned_cols=85 Identities=21% Similarity=0.198 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.++|=.|++.|. ++..|+ ..|+.++... ..+.++.+|+.+.. +. -+.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35678888877664 333343 3666654332 25667888887632 00 146
Q ss_pred ccEEEEcccccCC------C---H-----------HHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMGI------N---F-----------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~~------~---~-----------~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+... + + ..+++.+.+.++.+|.++.+.
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 8999988876531 1 1 134556777777888877753
No 458
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=24.38 E-value=1.6e+02 Score=24.37 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=36.3
Q ss_pred CCEEEEEcCc--ccH---HHHHhc---cceEEEeccCC-------------CCcEEEccCCCCC-----C-----CCCCc
Q 022592 142 SLVIADFGCG--DAR---LAKSVK---NKVFSFDLVSN-------------DPSVIACDMSNTP-----L-----NSSSV 190 (294)
Q Consensus 142 ~~~VLDiGcG--~G~---~~~~l~---~~v~gvD~s~~-------------~~~~~~~d~~~lp-----~-----~~~~f 190 (294)
+.+||=.|++ .|. ++..|+ ..|+.++.+.. .+.++.+|+.+.. + .-+.+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 85 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578888875 332 223333 37888886642 3567888887632 0 01468
Q ss_pred cEEEEccccc
Q 022592 191 DVAVFCLSLM 200 (294)
Q Consensus 191 D~Vi~~~~l~ 200 (294)
|++|.+..+.
T Consensus 86 d~lv~nAg~~ 95 (275)
T 2pd4_A 86 DFIVHSVAFA 95 (275)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCccC
Confidence 9999887653
No 459
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.36 E-value=92 Score=26.74 Aligned_cols=58 Identities=16% Similarity=0.069 Sum_probs=39.0
Q ss_pred CCEEEEEcCcccHHHHHhc-------cceEEEeccC-------------------CCCcEEEccCCCCC---CCCCCccE
Q 022592 142 SLVIADFGCGDARLAKSVK-------NKVFSFDLVS-------------------NDPSVIACDMSNTP---LNSSSVDV 192 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~-------------------~~~~~~~~d~~~lp---~~~~~fD~ 192 (294)
+.+||=.| |+|.++..+. ..|++++.+. .++.++.+|+.+.. -.-..+|+
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 46888777 4566665554 3788998754 46778899987632 01126899
Q ss_pred EEEccccc
Q 022592 193 AVFCLSLM 200 (294)
Q Consensus 193 Vi~~~~l~ 200 (294)
|+.+....
T Consensus 104 Vih~A~~~ 111 (351)
T 3ruf_A 104 VLHQAALG 111 (351)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 99887764
No 460
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=24.36 E-value=2.3e+02 Score=21.50 Aligned_cols=62 Identities=11% Similarity=-0.017 Sum_probs=37.0
Q ss_pred CccEEEEcccccCCCH--HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCeEEE
Q 022592 189 SVDVAVFCLSLMGINF--PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFAPVS 255 (294)
Q Consensus 189 ~fD~Vi~~~~l~~~~~--~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 255 (294)
.+|+|+.....++-.+ ..++..+.....+|-.+.+..-..+. .-....+.+.|+..||.++.
T Consensus 56 ~~d~ii~Gspty~g~~p~~~~l~~l~~~~~~~k~va~fgs~g~~-----~~a~~~l~~~l~~~G~~~v~ 119 (159)
T 3fni_A 56 RCTGLVIGMSPAASAASIQGALSTILGSVNEKQAVGIFETGGGD-----DEPIDPLLSKFRNLGLTTAF 119 (159)
T ss_dssp TEEEEEEECCBTTSHHHHHHHHHHHHHHCCTTSEEEEECCSSSC-----BCCHHHHHHHHHHTTCEESS
T ss_pred hCCEEEEEcCcCCCCccHHHHHHHHHhhcccCCEEEEEEcCCCC-----cHHHHHHHHHHHHCCCEEec
Confidence 3888887665555333 35666665544444444443322111 22578999999999998763
No 461
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=24.22 E-value=2.2e+02 Score=21.09 Aligned_cols=78 Identities=10% Similarity=0.029 Sum_probs=46.7
Q ss_pred CEEEEEcCcccHHHHHhc-------cceEEEeccC------------CCCcEEEccCCCCC----CCCCCccEEEEcccc
Q 022592 143 LVIADFGCGDARLAKSVK-------NKVFSFDLVS------------NDPSVIACDMSNTP----LNSSSVDVAVFCLSL 199 (294)
Q Consensus 143 ~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~------------~~~~~~~~d~~~lp----~~~~~fD~Vi~~~~l 199 (294)
.+|+=+|+ |..+..++ ..|+.+|.++ ..+.++.+|..+.. ..-..+|+|++...-
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 36777776 55554443 3789999863 25778888876531 113468888876431
Q ss_pred cCCCHHHHHHHHHHhcCcCcEEEEE
Q 022592 200 MGINFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 200 ~~~~~~~~l~el~r~LkpgG~l~i~ 224 (294)
. .....+..+.+.+.|...++..
T Consensus 82 d--~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 D--ADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp H--HHHHHHHHHHHHHTSSSCEEEE
T ss_pred h--HHHHHHHHHHHHHCCCCEEEEE
Confidence 1 2234455566667676666653
No 462
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=24.19 E-value=1.8e+02 Score=25.03 Aligned_cols=60 Identities=22% Similarity=0.244 Sum_probs=38.4
Q ss_pred CCCEEEEEcCcccHHHHHhc---------cceEEEeccCC---------------------CCcEEEccCCCCC----CC
Q 022592 141 PSLVIADFGCGDARLAKSVK---------NKVFSFDLVSN---------------------DPSVIACDMSNTP----LN 186 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~---------~~v~gvD~s~~---------------------~~~~~~~d~~~lp----~~ 186 (294)
.+.+||=.| |+|.++..++ ..|+++|.+.. .+.++.+|+.+.. +.
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 346788777 4566554442 26888886432 4578888987632 11
Q ss_pred CCCccEEEEcccccC
Q 022592 187 SSSVDVAVFCLSLMG 201 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~ 201 (294)
...+|+||.+..+..
T Consensus 88 ~~~~D~vih~A~~~~ 102 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSD 102 (362)
T ss_dssp TSCCSEEEECCCCCG
T ss_pred ccCCCEEEECCccCC
Confidence 356999998877543
No 463
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=24.05 E-value=2.9e+02 Score=22.40 Aligned_cols=84 Identities=19% Similarity=0.113 Sum_probs=49.3
Q ss_pred CCEEEEEcCcccH---HHHHhc---cceEEEeccCCCC--cEEEccCCCCC----------CCCCCccEEEEcccccC--
Q 022592 142 SLVIADFGCGDAR---LAKSVK---NKVFSFDLVSNDP--SVIACDMSNTP----------LNSSSVDVAVFCLSLMG-- 201 (294)
Q Consensus 142 ~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~~~~--~~~~~d~~~lp----------~~~~~fD~Vi~~~~l~~-- 201 (294)
+.+||=.|++.|. ++..|+ ..|+++|.+.... ..+.+|+.+.. -..+.+|++|.+..+..
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~ 101 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGG 101 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence 3478888877654 233333 3788898877433 34555554421 11246899998887532
Q ss_pred -----CC---H-----------HHHHHHHHHhcCcCcEEEEEe
Q 022592 202 -----IN---F-----------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 202 -----~~---~-----------~~~l~el~r~LkpgG~l~i~e 225 (294)
.+ + ..+++.+...++++|.++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (251)
T 3orf_A 102 NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG 144 (251)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence 11 1 124556667777788877763
No 464
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=23.93 E-value=1.2e+02 Score=25.06 Aligned_cols=85 Identities=13% Similarity=0.207 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-cccHHHHHhc-------cceEEEeccC------------CCCcEEEccCCCCC-----CC-----CC--
Q 022592 141 PSLVIADFGC-GDARLAKSVK-------NKVFSFDLVS------------NDPSVIACDMSNTP-----LN-----SS-- 188 (294)
Q Consensus 141 ~~~~VLDiGc-G~G~~~~~l~-------~~v~gvD~s~------------~~~~~~~~d~~~lp-----~~-----~~-- 188 (294)
.+.++|=.|+ |+|.++..++ ..|+.+|.+. .++.++.+|+.+.. +. -+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3457888887 2444444333 3788887664 24667888887632 00 12
Q ss_pred -CccEEEEcccccC-----------CCHH--------------HHHHHHHHhcCcCcEEEEEe
Q 022592 189 -SVDVAVFCLSLMG-----------INFP--------------NYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 189 -~fD~Vi~~~~l~~-----------~~~~--------------~~l~el~r~LkpgG~l~i~e 225 (294)
.+|++|.+..+.. .+.. .+++.+.+.++++|.++.+.
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 6999998776532 1211 23455666667778777754
No 465
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=23.18 E-value=24 Score=32.05 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=46.1
Q ss_pred CCCEEEEEcCccc-HHHHHhc----cceEEEeccCCC--------CcEEEccC---------------------CCCCCC
Q 022592 141 PSLVIADFGCGDA-RLAKSVK----NKVFSFDLVSND--------PSVIACDM---------------------SNTPLN 186 (294)
Q Consensus 141 ~~~~VLDiGcG~G-~~~~~l~----~~v~gvD~s~~~--------~~~~~~d~---------------------~~lp~~ 186 (294)
++.+|+=||+|.- ..+..++ ..|+++|.++.. ..++..+. ..+.-.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 4578999999843 2222222 489999998742 22221110 000001
Q ss_pred CCCccEEEEcccccC-CCHHHHHHHHHHhcCcCcEEEEE
Q 022592 187 SSSVDVAVFCLSLMG-INFPNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 187 ~~~fD~Vi~~~~l~~-~~~~~~l~el~r~LkpgG~l~i~ 224 (294)
-..+|+||....+.. ..+.-+-+++.+.+|||++++=+
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 146899997643222 12222346888899998866653
No 466
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=23.11 E-value=24 Score=31.57 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=43.6
Q ss_pred CCEEEEEcCccc-HHHHHhc----cceEEEeccCCCCc-----------EEEccCCCCCCCCCCccEEEEcccccCC-CH
Q 022592 142 SLVIADFGCGDA-RLAKSVK----NKVFSFDLVSNDPS-----------VIACDMSNTPLNSSSVDVAVFCLSLMGI-NF 204 (294)
Q Consensus 142 ~~~VLDiGcG~G-~~~~~l~----~~v~gvD~s~~~~~-----------~~~~d~~~lp~~~~~fD~Vi~~~~l~~~-~~ 204 (294)
+.+||=+|+|.- ..+..++ .+|+++|.++.+.. ....+..++.-.-..+|+|+.+...... .+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~ 246 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAP 246 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCC
Confidence 468999998632 2222222 37999998763211 1111101110001258999876554321 11
Q ss_pred HHHHHHHHHhcCcCcEEEEE
Q 022592 205 PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~ 224 (294)
.-+..+..+.++|||.++.+
T Consensus 247 ~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 247 ILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CCBCHHHHTTSCTTCEEEET
T ss_pred eecCHHHHhhCCCCCEEEEE
Confidence 11234567789999977764
No 467
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=23.09 E-value=2.1e+02 Score=23.57 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=39.8
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC--------------------------CCCcEEEccCCCCC----
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS--------------------------NDPSVIACDMSNTP---- 184 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~--------------------------~~~~~~~~d~~~lp---- 184 (294)
.+.+||=.|++.|. ++..|+ ..|+.+|.+. .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 45678888876664 333343 3788888761 35677888887632
Q ss_pred -CC-----CCCccEEEEcccccC
Q 022592 185 -LN-----SSSVDVAVFCLSLMG 201 (294)
Q Consensus 185 -~~-----~~~fD~Vi~~~~l~~ 201 (294)
+. -+.+|++|.+..+..
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 10 146899999887754
No 468
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.86 E-value=99 Score=26.09 Aligned_cols=60 Identities=13% Similarity=0.103 Sum_probs=37.8
Q ss_pred CCCEEEEEcCcccHHHHHhc-------cceEEEeccCC----CCcEEEccCCCCC-----CCCCCccEEEEcccccC
Q 022592 141 PSLVIADFGCGDARLAKSVK-------NKVFSFDLVSN----DPSVIACDMSNTP-----LNSSSVDVAVFCLSLMG 201 (294)
Q Consensus 141 ~~~~VLDiGcG~G~~~~~l~-------~~v~gvD~s~~----~~~~~~~d~~~lp-----~~~~~fD~Vi~~~~l~~ 201 (294)
+..+||=.| |+|.++..++ ..|++++.+.. ++.++.+|+.+.. +....+|+|+.+.....
T Consensus 11 ~~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 86 (321)
T 2pk3_A 11 GSMRALITG-VAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS 86 (321)
T ss_dssp --CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred CcceEEEEC-CCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence 445777665 5677666554 37889987764 3567888887632 11234899998877643
No 469
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=22.84 E-value=2.8e+02 Score=23.77 Aligned_cols=76 Identities=16% Similarity=0.234 Sum_probs=45.5
Q ss_pred CEEEEEcCcc-c-HHHHHhc---c--ceEEEeccCCCCc---------EEEccCCCCCCCCCCccEEEEcccccCCCHHH
Q 022592 143 LVIADFGCGD-A-RLAKSVK---N--KVFSFDLVSNDPS---------VIACDMSNTPLNSSSVDVAVFCLSLMGINFPN 206 (294)
Q Consensus 143 ~~VLDiGcG~-G-~~~~~l~---~--~v~gvD~s~~~~~---------~~~~d~~~lp~~~~~fD~Vi~~~~l~~~~~~~ 206 (294)
.+|.=||+|. | .++..+. . .|+++|.++.... ....|...+ .-...|+|+.+-... ....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~--~~~~ 109 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR--TFRE 109 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG--GHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH--HHHH
Confidence 5899999874 2 2344443 2 6899998873211 122233220 123479998764432 3457
Q ss_pred HHHHHHHhcCcCcEEE
Q 022592 207 YLQEAQRVLKPSGWLL 222 (294)
Q Consensus 207 ~l~el~r~LkpgG~l~ 222 (294)
++.++...|+||..++
T Consensus 110 vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 110 IAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHSCTTCEEE
T ss_pred HHHHHhhccCCCcEEE
Confidence 7888888899887554
No 470
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.95 E-value=2.1e+02 Score=23.33 Aligned_cols=61 Identities=23% Similarity=0.253 Sum_probs=39.7
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccCC--------------CCcEEEccCCCCC-----CC----CCCcc
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTP-----LN----SSSVD 191 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~lp-----~~----~~~fD 191 (294)
.+.++|=.|++.|. ++..|+ ..|+.+|.+.. ++.++.+|+.+.. +. .+.+|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence 45578888887764 233333 37888887752 4567888887632 00 14789
Q ss_pred EEEEcccccC
Q 022592 192 VAVFCLSLMG 201 (294)
Q Consensus 192 ~Vi~~~~l~~ 201 (294)
++|.+..+..
T Consensus 86 ~lv~nAg~~~ 95 (252)
T 3h7a_A 86 VTIFNVGANV 95 (252)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCcCC
Confidence 9998887643
No 471
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=21.90 E-value=2.5e+02 Score=23.34 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=38.4
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccCC--------------CCcEEEccCCCCCC---------CCCCcc
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVSN--------------DPSVIACDMSNTPL---------NSSSVD 191 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~~--------------~~~~~~~d~~~lp~---------~~~~fD 191 (294)
.+.++|=.|++.|. ++..|+ .+|+.+|.+.. .+.++.+|+.+... ..+.+|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 45678877776554 233333 37888887762 45678888876430 014689
Q ss_pred EEEEccccc
Q 022592 192 VAVFCLSLM 200 (294)
Q Consensus 192 ~Vi~~~~l~ 200 (294)
++|.+..+.
T Consensus 112 ~lvnnAg~~ 120 (275)
T 4imr_A 112 ILVINASAQ 120 (275)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999888764
No 472
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=21.62 E-value=27 Score=31.84 Aligned_cols=31 Identities=26% Similarity=0.277 Sum_probs=20.6
Q ss_pred CCCEEEEEcCcccH-HHHHhc----cceEEEeccCC
Q 022592 141 PSLVIADFGCGDAR-LAKSVK----NKVFSFDLVSN 171 (294)
Q Consensus 141 ~~~~VLDiGcG~G~-~~~~l~----~~v~gvD~s~~ 171 (294)
++.+|+=+|+|.-. .+..++ ..|+++|.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 56799999997532 222222 47999998874
No 473
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.59 E-value=1.8e+02 Score=23.84 Aligned_cols=61 Identities=21% Similarity=0.271 Sum_probs=39.2
Q ss_pred CCCEEEEEcC-cccH---HHHHhc---cceEEEeccC---------------CCCcEEEccCCCCC-----CC-----CC
Q 022592 141 PSLVIADFGC-GDAR---LAKSVK---NKVFSFDLVS---------------NDPSVIACDMSNTP-----LN-----SS 188 (294)
Q Consensus 141 ~~~~VLDiGc-G~G~---~~~~l~---~~v~gvD~s~---------------~~~~~~~~d~~~lp-----~~-----~~ 188 (294)
.+.+||=.|+ |.|. ++..|+ ..|+.+|.+. .++.++.+|+.+.. +. -+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 3557888887 5554 333443 3788887654 35678889987632 00 13
Q ss_pred CccEEEEcccccC
Q 022592 189 SVDVAVFCLSLMG 201 (294)
Q Consensus 189 ~fD~Vi~~~~l~~ 201 (294)
.+|++|.+..+..
T Consensus 101 ~id~li~~Ag~~~ 113 (266)
T 3o38_A 101 RLDVLVNNAGLGG 113 (266)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCcCC
Confidence 6899999887643
No 474
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.45 E-value=1.7e+02 Score=24.71 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=39.5
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC--------------CCCcEEEccCCCCCC-----C-----CCCc
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS--------------NDPSVIACDMSNTPL-----N-----SSSV 190 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~--------------~~~~~~~~d~~~lp~-----~-----~~~f 190 (294)
.+.+||=.|++.|. ++..|+ ..|+.+|.+. .++.++.+|+.+..- . .+.+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 45688888887664 233333 3788888765 256788889876320 0 1368
Q ss_pred cEEEEccccc
Q 022592 191 DVAVFCLSLM 200 (294)
Q Consensus 191 D~Vi~~~~l~ 200 (294)
|++|.+..+.
T Consensus 110 d~lvnnAg~~ 119 (301)
T 3tjr_A 110 DVVFSNAGIV 119 (301)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999887764
No 475
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=21.33 E-value=3.3e+02 Score=22.84 Aligned_cols=85 Identities=18% Similarity=0.231 Sum_probs=53.0
Q ss_pred CCCEEEEEcCcc--cH---HHHHhc---cceEEEeccC-------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGD--AR---LAKSVK---NKVFSFDLVS-------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~--G~---~~~~l~---~~v~gvD~s~-------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.++|=.|++. |. ++..|+ ..|+.+|.+. ..+.++.+|+.+.. +. -+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 356788888754 33 334443 3788888775 24567888987632 00 146
Q ss_pred ccEEEEcccccC----------CCH--------------HHHHHHHHHhcCcCcEEEEEe
Q 022592 190 VDVAVFCLSLMG----------INF--------------PNYLQEAQRVLKPSGWLLIAE 225 (294)
Q Consensus 190 fD~Vi~~~~l~~----------~~~--------------~~~l~el~r~LkpgG~l~i~e 225 (294)
+|++|.+..+.. .+. ..+++.+...++.+|.++.+.
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 899998876542 111 134556667777788887764
No 476
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.14 E-value=1.1e+02 Score=21.18 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=33.5
Q ss_pred CCEEEEEcCcccHHHHHhc--------cceEEEeccC--------CCCcEEEccCCCCC---CCCCCccEEEEccc
Q 022592 142 SLVIADFGCGDARLAKSVK--------NKVFSFDLVS--------NDPSVIACDMSNTP---LNSSSVDVAVFCLS 198 (294)
Q Consensus 142 ~~~VLDiGcG~G~~~~~l~--------~~v~gvD~s~--------~~~~~~~~d~~~lp---~~~~~fD~Vi~~~~ 198 (294)
..+|+=+|+ |..+..++ ..|+++|.++ ..+.+..+|+.+.. -.-..+|+|+.+..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 357999998 44444332 2678888876 24566777765421 00135899887754
No 477
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.08 E-value=2.5e+02 Score=23.42 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=39.3
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccCC---------------------CCcEEEccCCCCC-----CC--
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVSN---------------------DPSVIACDMSNTP-----LN-- 186 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~~---------------------~~~~~~~d~~~lp-----~~-- 186 (294)
.+.++|=.|++.|. ++..|+ ..|+.++.+.. ++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 45578888887764 333443 37888887653 3557788887632 00
Q ss_pred ---CCCccEEEEcccccC
Q 022592 187 ---SSSVDVAVFCLSLMG 201 (294)
Q Consensus 187 ---~~~fD~Vi~~~~l~~ 201 (294)
-+.+|++|.+..+..
T Consensus 88 ~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 88 VEQFGGIDICVNNASAIN 105 (285)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 136899998877653
No 478
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=20.88 E-value=2.3e+02 Score=23.09 Aligned_cols=60 Identities=13% Similarity=0.126 Sum_probs=38.7
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC-----------CCCcEEEccCCCCC-----C-----CCCCccEE
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTP-----L-----NSSSVDVA 193 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp-----~-----~~~~fD~V 193 (294)
.+.+||=.|++.|. ++..|+ .+|+.+|.+. ..+.++.+|+.+.. + .-+.+|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45578888876654 233333 3788888765 35677888887632 0 01368999
Q ss_pred EEccccc
Q 022592 194 VFCLSLM 200 (294)
Q Consensus 194 i~~~~l~ 200 (294)
|.+..+.
T Consensus 87 v~~Ag~~ 93 (259)
T 4e6p_A 87 VNNAALF 93 (259)
T ss_dssp EECCCCC
T ss_pred EECCCcC
Confidence 9987764
No 479
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.85 E-value=2.1e+02 Score=23.19 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=36.1
Q ss_pred CEEEEEcCcccH---HHHHhc---cceEEEeccC----------CCCcEEEccCCCCC-----CC-----CCCccEEEEc
Q 022592 143 LVIADFGCGDAR---LAKSVK---NKVFSFDLVS----------NDPSVIACDMSNTP-----LN-----SSSVDVAVFC 196 (294)
Q Consensus 143 ~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~----------~~~~~~~~d~~~lp-----~~-----~~~fD~Vi~~ 196 (294)
.+||=.|++.|. ++..|+ ..|+.+|.+. .+..++.+|+.+.. +. -+.+|+++.+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n 82 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 467777776654 233333 3788888775 24557888887632 00 1468999988
Q ss_pred cccc
Q 022592 197 LSLM 200 (294)
Q Consensus 197 ~~l~ 200 (294)
....
T Consensus 83 Ag~~ 86 (247)
T 3dii_A 83 ACRG 86 (247)
T ss_dssp CC-C
T ss_pred CCCC
Confidence 7654
No 480
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.85 E-value=2.1e+02 Score=23.90 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=39.8
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEEeccC-----------CCCcEEEccCCCCC-----CC-----CCCccEE
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSFDLVS-----------NDPSVIACDMSNTP-----LN-----SSSVDVA 193 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gvD~s~-----------~~~~~~~~d~~~lp-----~~-----~~~fD~V 193 (294)
.+.++|=.|++.|. ++..|+ ..|+.+|.+. ..+.++.+|+.+.. +. -+.+|++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45578877876664 233333 3788888764 35678888987642 00 1368999
Q ss_pred EEcccccC
Q 022592 194 VFCLSLMG 201 (294)
Q Consensus 194 i~~~~l~~ 201 (294)
|.+..+.+
T Consensus 108 vnnAg~~~ 115 (277)
T 3gvc_A 108 VANAGVVH 115 (277)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 98877653
No 481
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=20.47 E-value=2.6e+02 Score=22.91 Aligned_cols=84 Identities=13% Similarity=0.088 Sum_probs=50.0
Q ss_pred CCCEEEEEcCcccH---HHHHhc---cceEEE-eccC--------------CCCcEEEccCCCCC-----CC-----CCC
Q 022592 141 PSLVIADFGCGDAR---LAKSVK---NKVFSF-DLVS--------------NDPSVIACDMSNTP-----LN-----SSS 189 (294)
Q Consensus 141 ~~~~VLDiGcG~G~---~~~~l~---~~v~gv-D~s~--------------~~~~~~~~d~~~lp-----~~-----~~~ 189 (294)
.+.++|=.|++.|. ++..|+ ..|+.+ +.+. .++.++.+|+.+.. +. -+.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 45678888887764 233333 367766 4332 35678888987632 00 146
Q ss_pred ccEEEEccccc-C------CCH--------------HHHHHHHHHhcCcCcEEEEE
Q 022592 190 VDVAVFCLSLM-G------INF--------------PNYLQEAQRVLKPSGWLLIA 224 (294)
Q Consensus 190 fD~Vi~~~~l~-~------~~~--------------~~~l~el~r~LkpgG~l~i~ 224 (294)
+|+++.+.... . .+. ..+++.+.+.++++|.++.+
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 89999877544 1 111 13455666667777877765
No 482
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=20.10 E-value=2.4e+02 Score=20.08 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCcCcEEEEEeecCCCCCCCCCCCHHHHHHHHHHCCCe
Q 022592 205 PNYLQEAQRVLKPSGWLLIAEVKSRFDPNTGGADPNKFSKAVCDLGFA 252 (294)
Q Consensus 205 ~~~l~el~r~LkpgG~l~i~e~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 252 (294)
...|.++.+.++.||.++++.+. ..+.+.|+..||.
T Consensus 64 l~~L~~~~~~~~~g~~l~l~~~~------------~~v~~~l~~~gl~ 99 (118)
T 3ny7_A 64 LDAFQRFVKRLPEGCELRVCNVE------------FQPLRTMARAGIQ 99 (118)
T ss_dssp HHHHHHHHHHCCTTCEEEEECCC------------HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEecCC------------HHHHHHHHHcCCh
Confidence 35666777666558888887643 6788999999985
Done!