BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022596
(294 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 176/294 (59%), Positives = 226/294 (76%), Gaps = 11/294 (3%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P A + SPLL HS+ + L RSR +RR P PLRGA RLLRRASGR++MLREPSVRVRE
Sbjct: 11 PFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAV-RLLRRASGRQMMLREPSVRVRE 69
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+PII+LD+LWNL FVI++F VLG+S +EKP VPLR I+GYALQ
Sbjct: 70 TAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQ 129
Query: 126 CLFHVFCVSLEFKRRRRGEGVV----FGDSVSGSSSTTVTGDE------EERFHGENDSS 175
C+ H+ CV++E+KRRR D SG S +V+G + E+ + + S+
Sbjct: 130 CIIHMSCVAVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQTVNEDESSN 189
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+ K++ESANT SF+WW++GFYW+TA G+ LI SPQLYWL +TFLAFDVVFV+ICV +A
Sbjct: 190 LVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIA 249
Query: 236 CLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLH 289
CL+G+A+CCCLPCI+ ILYA+T++EGAT+EEI+RLPK+ F+R +EKVNG +
Sbjct: 250 CLVGVAICCCLPCIIAILYAVTDQEGATKEEIERLPKYTFNRTGDVEKVNGDIQ 303
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/293 (62%), Positives = 226/293 (77%), Gaps = 4/293 (1%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P +D+ + SPLL HS+ DHL+RSRR+LRR PPP RGAAARLLRRAS RR+MLREPSVRV
Sbjct: 3 SPQSDSVDMSPLLTHSIADHLLRSRRILRRQPPPFRGAAARLLRRASSRRMMLREPSVRV 62
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQ+ WAYS+PII LDVLWNL FV + VLG+S+ E+P++PLR+ I+GY+
Sbjct: 63 RENAAEQLEERQTDWAYSKPIIFLDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYS 122
Query: 124 LQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDE----EERFHGENDSSVAKN 179
LQCLFH+ CV E+KRR G S S S S + GD E+ + D+ V K
Sbjct: 123 LQCLFHIGCVIFEYKRRLFGTSARLEASDSTSVSESDGGDSVDDGVEQRGNDGDTCVVKQ 182
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WWIVGFYW+TA G+ L + SPQLYWLC+TFLAFDV+FV+IC+ VACLIG
Sbjct: 183 LESANTMFSFIWWIVGFYWVTAGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVACLIG 242
Query: 240 IAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
+A+CCCLPCI+GILYA+T+REGAT+EEI++LP +KF RI EKVN F
Sbjct: 243 LAICCCLPCIIGILYAMTDREGATQEEIEQLPMYKFRRIGDFEKVNADFQATF 295
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/288 (59%), Positives = 204/288 (70%), Gaps = 13/288 (4%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P D + SPLL + + S+ PLRGAA+RLLRRAS RR+MLREPSVRV
Sbjct: 12 SPATDTMDVSPLLGRNRRNRPRSSQ--------PLRGAASRLLRRASNRRMMLREPSVRV 63
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS WAYS+PIIVLD+LWN VFVIV+ A+LG S E P+VPLRL I+GY
Sbjct: 64 REVAAEQLEERQSQWAYSKPIIVLDILWNFVFVIVSIAILGFSSEEDPDVPLRLWIIGYN 123
Query: 124 LQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF-----HGENDSSVAK 178
QCL HV CV E+KRRR G+ S S + + DE + + ++ +S K
Sbjct: 124 FQCLLHVGCVIAEYKRRREANSPPSGEDSSNHESLSGSDDESDGYSINDTDDDHGTSFTK 183
Query: 179 NLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
+LESANT SF+WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV+ICV VA LI
Sbjct: 184 HLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLI 243
Query: 239 GIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
GIAVCCCLPCI+ ILYAL ++EGA +EEI+RL KFKF + EKVNG
Sbjct: 244 GIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFLVVKNSEKVNG 291
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 206/290 (71%), Gaps = 15/290 (5%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P D + SPLL + + S+ P+RGAA+RLLRRAS RR+MLREPSVRV
Sbjct: 12 SPTTDTMDASPLLGRNRRNRPRSSQ--------PIRGAASRLLRRASNRRMMLREPSVRV 63
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS WAYS+PIIVLD+LWN +FVIV+ A+LG S +E P+VPLRL I+GY
Sbjct: 64 REVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYN 123
Query: 124 LQCLFHVFCVSLEFKRRR-------RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSV 176
+QCLFHV CV E+KRRR GE +S+SGS + ++ +S
Sbjct: 124 VQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNHESLSGSEDESDGYSINNTDDDDHGTSF 183
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
K+LESANT SF+WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV+ICV VA
Sbjct: 184 TKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVAS 243
Query: 237 LIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
LIGIAVCCCLPCI+ ILYAL ++EGA +EEI+RL KFKF + EKVNG
Sbjct: 244 LIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFLTVKNSEKVNG 293
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/257 (63%), Positives = 194/257 (75%), Gaps = 7/257 (2%)
Query: 37 PLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFV 96
P+RGAA+RLLRRAS RR+MLREPSVRVRE AAEQLEERQS WAYS+PIIVLD+LWN +FV
Sbjct: 20 PIRGAASRLLRRASNRRMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFV 79
Query: 97 IVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR-------RGEGVVFG 149
IV+ A+LG S +E P+VPLRL I+GY +QCLFHV CV E+KRRR GE
Sbjct: 80 IVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNH 139
Query: 150 DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
+S+SGS + ++ +S K+LESANT SF+WWI+GFYW+TA E L
Sbjct: 140 ESLSGSEDESDGYSINNTDDDDHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQS 199
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDR 269
SPQLYWLCV FLAFDV+FV+ICV VA LIGIAVCCCLPCI+ ILYAL ++EGA +EEI+R
Sbjct: 200 SPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIER 259
Query: 270 LPKFKFSRIDGLEKVNG 286
L KFKF + EKVNG
Sbjct: 260 LLKFKFLTVKNSEKVNG 276
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/282 (58%), Positives = 196/282 (69%), Gaps = 20/282 (7%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
PA +SPLL + RRP PLRGAA+RLLRRAS R +MLRE SVRVRE
Sbjct: 15 PATDDASSPLLNRN------------RRPSQPLRGAASRLLRRASSRGMMLRESSVRVRE 62
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQ+EERQS WAYS+P+IVLDVLWNL FV V V S E P PLR IVGY LQ
Sbjct: 63 TAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQ 122
Query: 126 CLFHVFCVSLEFKRRRRGEGVVFG-DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESAN 184
CL H+ CV E++RR + G SV GSS G E E+ +SVAK++ES N
Sbjct: 123 CLIHIACVIAEYRRRESNRDLDSGLSSVQGSSDGY--GAE-----IESGNSVAKHIESTN 175
Query: 185 TFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCC 244
SF+WW++GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV VACLIGIAVCC
Sbjct: 176 AIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCC 235
Query: 245 CLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
CLPCI+ +LYAL +REGA++EEI++LPKFKF + EKVNG
Sbjct: 236 CLPCIIAVLYALADREGASDEEIEKLPKFKFLTVRNSEKVNG 277
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/287 (60%), Positives = 217/287 (75%), Gaps = 11/287 (3%)
Query: 4 NPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRV 63
+P +DA ++SPLLAHS+ +HL+RSRRLLRRPP LRGAAAR+LRRAS RR+MLREPSVRV
Sbjct: 11 SPQSDAIDSSPLLAHSIANHLLRSRRLLRRPPQ-LRGAAARILRRASSRRMMLREPSVRV 69
Query: 64 RETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
RE AAEQLEERQS W YS+P++V+DVLW+L VI+A VLG+S+ EKP VP R IV Y
Sbjct: 70 RENAAEQLEERQSDWGYSKPVVVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYI 129
Query: 124 LQCLFHVFCVSLEFKRRR----RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN 179
L C HV CV +E+++RR R G++ D SG S T E G+N +SVAK
Sbjct: 130 LLCSCHVVCVVVEYRKRRNLGLRESGILSSD--SGDSLDFSTQQSEN--DGQN-TSVAKR 184
Query: 180 LESANTFLSFLWWIVGFYWITASG-ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
+ESA T S +WWI+GFYW+T +G + + SPQLYWLC+ FLA D +FV+IC+ VACLI
Sbjct: 185 VESAMTTFSIIWWIIGFYWVTTAGRQNVAKDSPQLYWLCIAFLAADTLFVIICIAVACLI 244
Query: 239 GIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVN 285
GIAVCC LPCI+GILYA+ ++EGAT+EEIDRL K+KF RI EKVN
Sbjct: 245 GIAVCCFLPCIIGILYAMADQEGATKEEIDRLLKYKFHRIGNCEKVN 291
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/276 (59%), Positives = 196/276 (71%), Gaps = 17/276 (6%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L R+RR L R PLRGAA+RLLRRAS RR+MLRE SVRVRE AAEQ+EERQS WAYS+P
Sbjct: 24 LNRNRRALSRSSQPLRGAASRLLRRASSRRMMLRESSVRVRENAAEQIEERQSEWAYSKP 83
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
+IVLDVLWNL FV V A+LG S +E P VPLR I+GY LQCLFHV CV E++RR R
Sbjct: 84 VIVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGCVIAEYRRRHRR 143
Query: 144 EGVVFGDS-------------VSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
+ F + S + D + E +S+AK+LESAN SF+
Sbjct: 144 QSDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQ----IEPGTSLAKHLESANAIFSFV 199
Query: 191 WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCIL 250
WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV VACLIGIAVCCCLPCI+
Sbjct: 200 WWIIGFYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCII 259
Query: 251 GILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
+LYAL +R GA++EEI+RLPKFKF + EKVNG
Sbjct: 260 AVLYALADRGGASDEEIERLPKFKFLTVRNSEKVNG 295
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/298 (60%), Positives = 223/298 (74%), Gaps = 15/298 (5%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRR----GEGVVFGDSVSGSSSTTVTGDE--------EERFHGENDS 174
+ H+ CV +E+KRRRR G G SG S++ DE E R E+++
Sbjct: 125 VLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDET 184
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAFDV FV+ICV V
Sbjct: 185 SVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAV 244
Query: 235 ACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
AC+IGIAVCCCLPCI+ ILY + ++EGAT+EEI+RLPK+KF RI EK+NG + F
Sbjct: 245 ACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESF 302
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/266 (58%), Positives = 190/266 (71%), Gaps = 9/266 (3%)
Query: 26 RSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPII 85
RSR LLRR PPPL AA RRASGRR+MLREPSVR+RE AA ++E RQS WAYSRP++
Sbjct: 25 RSRHLLRRAPPPLH-TAATFFRRASGRRMMLREPSVRMREAAAAEVEGRQSEWAYSRPVV 83
Query: 86 VLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG-- 143
LDV WN VF+ + +VL +S +E P VPLR IVGY LQ H CV EF RRRR
Sbjct: 84 ALDVAWNAVFLAIGASVLALSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRV 143
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHG-----END-SSVAKNLESANTFLSFLWWIVGFY 197
G G +V G + + + +E F+ E D +S+ K++E+ NT LSF+WWIVGFY
Sbjct: 144 SGTHPGSNVVGHVQWSFSSESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFY 203
Query: 198 WITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT 257
W+TA G++L SPQLYWLC+TFLAFDVV V+ICV VACLIGIAVCCCLPCIL ILY +
Sbjct: 204 WVTAGGQSLTRDSPQLYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAILYVVA 263
Query: 258 EREGATEEEIDRLPKFKFSRIDGLEK 283
+ EGAT+EEID+LPK+KF I +K
Sbjct: 264 DPEGATKEEIDQLPKYKFRIIKEFKK 289
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/271 (57%), Positives = 191/271 (70%), Gaps = 13/271 (4%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L RSRR R PP LR AA RRASGRR+MLREPSVRVRE AA ++E RQS WAYSRP
Sbjct: 23 LPRSRR---RAPPSLR-TAATFFRRASGRRMMLREPSVRVREAAAAEVEGRQSEWAYSRP 78
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LDV WN F+ + +VL +S +E P VPLR IVGY LQ H CV EF RRRR
Sbjct: 79 VVALDVAWNAAFLAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRT 138
Query: 144 ---EGVVFGDSVSGSSSTTVTGDEE----ERFHGENDSSVAKNLESANTFLSFLWWIVGF 196
G G +V S S+ DEE E+F + +S+ K++ESANT LSF+WWIVGF
Sbjct: 139 ATISGTHSGSNVEWSFSSE--SDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGF 196
Query: 197 YWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
YW+TA G++L SPQLYWLC+TFL+FDV+ V+ICV VACLIGIAVCCCLPCIL ILY +
Sbjct: 197 YWVTAGGQSLTRDSPQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAILYVV 256
Query: 257 TEREGATEEEIDRLPKFKFSRIDGLEKVNGV 287
++EGAT+EEI++LPK+KF I +K +
Sbjct: 257 ADQEGATKEEIEQLPKYKFIIIKEFKKEGDI 287
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/286 (60%), Positives = 212/286 (74%), Gaps = 8/286 (2%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
+ H+ CV +E+KRRRR S + S G SVAK+LESANT
Sbjct: 125 VLHMVCVCVEYKRRRR-----LVSSGALERSGGWGSGHLSSSSGNFSCSVAKHLESANTM 179
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAFDV FV+ICV VAC+IGIAVCCCL
Sbjct: 180 FSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCL 239
Query: 247 PCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
PCI+ ILY + ++EGAT+EEI+RLPK+KF RI EK+NG + F
Sbjct: 240 PCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESF 285
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/250 (56%), Positives = 180/250 (72%), Gaps = 6/250 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR LR+ASGRRLM REPS+ VRE AAEQLEERQS WAYS+P++VLD+LWN FV A
Sbjct: 46 AARFLRQASGRRLM-REPSMVVREAAAEQLEERQSDWAYSKPVVVLDILWNCAFVAAAAT 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-----GEGVVFGDSVSGSS 156
VL +S NE P +PLRL IVGYALQ + HV CV +E++RR R V GD S
Sbjct: 105 VLVLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHREHSNAAAVSGDGSGDLS 164
Query: 157 STTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
S ++ G ++ S+AK+LESANT SF+WW+VGFYW++A E L+ SP LYWL
Sbjct: 165 SPSMDGSGHYVSFDDDGISMAKHLESANTMFSFIWWVVGFYWVSADSEALVQDSPLLYWL 224
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS 276
C+ FL FDV FV+ C+ +AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF
Sbjct: 225 CIAFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQ 284
Query: 277 RIDGLEKVNG 286
R + EK G
Sbjct: 285 RTETNEKHAG 294
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/296 (51%), Positives = 206/296 (69%), Gaps = 15/296 (5%)
Query: 8 DAAETSPLLA--HSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +TSPL+ + D RR ++R LR AAR LR+AS RR M REPS+ VRE
Sbjct: 13 DILDTSPLMGTPNRSLDDTHSGRRFVQRQS--LR-QAARFLRQASNRRTM-REPSMLVRE 68
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P+++LD++WN FV+VA +L +S NE P +PLRL IVGYA Q
Sbjct: 69 TAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRLWIVGYAFQ 128
Query: 126 CLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG--DEEERFH-------GENDSSV 176
C+ H+ CV +E++RRR+ F G+S+ +++G H ENDSSV
Sbjct: 129 CILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGSRANSSHYVSLAQLDENDSSV 188
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
AK+LESANT SF+WWI+GFYW++A G++L SP LYWLC+ FL FDV FV+ CV +AC
Sbjct: 189 AKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFVVFCVALAC 248
Query: 237 LIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
+IGIAVCCCLPCI+ +LYA+ ++EGAT+E++++L KFKF +++ EK + + P
Sbjct: 249 IIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVENTEKFSTDVQEPL 304
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 169/234 (72%), Gaps = 8/234 (3%)
Query: 54 LMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEV 113
+MLRE SVRVRETAAEQ+EERQS WAYS+P+IVLDVLWNL FV V V S E P
Sbjct: 1 MMLRESSVRVRETAAEQIEERQSEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRA 60
Query: 114 PLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG-DSVSGSSSTTVTGDEEERFHGEN 172
PLR IVGY LQCL H+ CV E++RR + G SV GSS G E E+
Sbjct: 61 PLRFWIVGYNLQCLIHIACVIAEYRRRESNRDLDSGLSSVQGSSDGY--GAE-----IES 113
Query: 173 DSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICV 232
+SVAK +ES N SF+WW++GFYW+TA E L SPQLYWLCV FLAFDV+FV++CV
Sbjct: 114 GNSVAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCV 173
Query: 233 GVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
VACLIGIAVCCCLPCI+ +LYAL +REGA++EEI++LPKFKF + EKVNG
Sbjct: 174 AVACLIGIAVCCCLPCIIAVLYALADREGASDEEIEKLPKFKFLTVRNSEKVNG 227
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/234 (61%), Positives = 178/234 (76%), Gaps = 2/234 (0%)
Query: 55 MLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVP 114
MLREPSVRVRE AAEQLEERQS W YS+PI+++DVL NL FVI+A VLG+S+ EKP+VP
Sbjct: 1 MLREPSVRVRENAAEQLEERQSGWGYSKPIVLIDVLRNLAFVIIAVGVLGLSLEEKPKVP 60
Query: 115 LRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDS 174
LR+ IVGY LQCL HV CV +E+++RR G SGS + G GE+ S
Sbjct: 61 LRVWIVGYGLQCLCHVVCVVVEYRKRRNLGFEESGILSSGSGDSLGFGTHRSGNDGEDTS 120
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASG-ETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
V K +ESA+T +S +WW++GFYW+TA+G + L SPQLYWLCVTFLAFD +FV+IC
Sbjct: 121 RVPKRVESASTMVSVIWWVIGFYWVTAAGRQDLEENSPQLYWLCVTFLAFDALFVIICAA 180
Query: 234 VACLIGIAVCCCLPCILGILYALTE-REGATEEEIDRLPKFKFSRIDGLEKVNG 286
ACLIGIAVCCCLPCI+GILYA+T+ +EGAT EEIDRLPK+KF R + EKV+G
Sbjct: 181 AACLIGIAVCCCLPCIIGILYAMTDPQEGATAEEIDRLPKYKFCRAEAFEKVDG 234
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/249 (59%), Positives = 185/249 (74%), Gaps = 12/249 (4%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+RVRETAAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PL
Sbjct: 1 MREPSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRR----GEGVVFGDSVSGSSSTTVTGDE------- 164
RL I+GY LQC+ H+ CV +E+KRRRR G G SG S++ DE
Sbjct: 61 RLWIIGYGLQCVLHMVCVCVEYKRRRRLVSSGALERSGGWGSGHLSSSSGSDEGDPIDYR 120
Query: 165 -EERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAF 223
E R E+++SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FLAF
Sbjct: 121 VEVRNRDEDETSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRDSPQLYWLCIVFLAF 180
Query: 224 DVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
DV FV+ICV VAC+IGIAVCCCLPCI+ ILY + ++EGAT+EEI+RLPK+KF RI EK
Sbjct: 181 DVFFVVICVAVACVIGIAVCCCLPCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEK 240
Query: 284 VNGVLHLPF 292
+NG + F
Sbjct: 241 LNGEIQESF 249
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/287 (51%), Positives = 193/287 (67%), Gaps = 13/287 (4%)
Query: 8 DAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
DAA+ +P L S + S R P AAR LR+ASGRRLM REPS+ VRE A
Sbjct: 14 DAADPTPFLGTSSDE----STSGRRLLRRPSLREAARFLRQASGRRLM-REPSMVVREAA 68
Query: 68 AEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
AEQLEERQS WAYS+P++VLD+LWN FV A V +S NE P +PLRL IVGYALQC+
Sbjct: 69 AEQLEERQSDWAYSKPVVVLDILWNFAFVAAAATVFILSRNENPNMPLRLWIVGYALQCV 128
Query: 128 FHVFCVSLEFKRR-RRGEGVVFGDSVS------GSSSTTVTGDEEERFHGENDS-SVAKN 179
HV CV +E++RR RR E G S +G ++D S+AK+
Sbjct: 129 LHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPSMDGSGHYVSLAQFDDDGISMAKH 188
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WW+VGFYW++A E+L+ SP LYWLC+ FL FDV FV+ C+ +AC++G
Sbjct: 189 LESANTMFSFIWWVVGFYWVSADSESLVRDSPLLYWLCIAFLGFDVFFVVFCMALACIVG 248
Query: 240 IAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
IAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF R + EK+ G
Sbjct: 249 IAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRTETNEKLAG 295
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/280 (52%), Positives = 200/280 (71%), Gaps = 17/280 (6%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLE--FKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF---HGE--NDSSVAKNLESA 183
CV++E F+ R+RG + D G+ ++ + DE+ HG N +AK+LES
Sbjct: 126 VCVAIEYRFRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVRIAKHLESG 185
Query: 184 NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVC 243
NT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVC
Sbjct: 186 NTMFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVC 245
Query: 244 CCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
CCLPCI+ ILYA++++EGA+E++I ++P++KF +D EK
Sbjct: 246 CCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRTMDETEK 285
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/287 (52%), Positives = 200/287 (69%), Gaps = 9/287 (3%)
Query: 3 MNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVR 62
M P ++ S L S P RR P LRG A RLLR+ GRR M REPS+
Sbjct: 1 MATPRSSSPRSDALLDSAPLLGGGGRRRGALRRPSLRGTA-RLLRQG-GRRAM-REPSLL 57
Query: 63 VRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGY 122
VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F++ VL +S +E P VPLR+ I GY
Sbjct: 58 VRETAAEQLEERQADWAYSRPVVALDLLWNLAFILTTAVVLVLSGDESPSVPLRIWIAGY 117
Query: 123 ALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGS--SSTTVTGDEEERFHGEND--SSV 176
A+QC+ H+ CV++E++ R +RG + D G+ SS+++ E HG +SV
Sbjct: 118 AVQCVVHMVCVAIEYRVRHGQRGGSSMAADEERGTDGSSSSIDDAGESGPHGRIGYFASV 177
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +AC
Sbjct: 178 AKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALAC 237
Query: 237 LIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++PK+KF R+D EK
Sbjct: 238 IIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRRVDEPEK 284
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/285 (51%), Positives = 197/285 (69%), Gaps = 16/285 (5%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P T + S P H R+ LR AAR LR A RR+M REPS+ VRE
Sbjct: 40 PPTVTRTISVDEESNPIHRSARRQGLRE--------AARFLRHAGSRRMM-REPSMLVRE 90
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+ +VGY +Q
Sbjct: 91 TAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQ 150
Query: 126 CLFHVFCVSLEFKRRRRG----EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE 181
C H+ CV +E++RRRR +G G + S S E+R GE S+ AK+LE
Sbjct: 151 CWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDR--GET-SNPAKHLE 207
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
SANT SF+WWI+GFYW++A G+TL S SPQLYWLC+ FL FDV FV+ CV +AC+IG+A
Sbjct: 208 SANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLA 267
Query: 242 VCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
VCCCLPCI+ ILYA+ ++EGA++ +ID++PKF+F++ +EK++G
Sbjct: 268 VCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSG 312
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/302 (50%), Positives = 204/302 (67%), Gaps = 22/302 (7%)
Query: 8 DAAETSPLLAHSL--PDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +++PLLA+S D L RR RR AA+ LR+ASGRR+M REPS+ VRE
Sbjct: 10 DIVDSTPLLANSAGSSDDLTSGRRFARRQ---RLRQAAQFLRQASGRRMM-REPSMLVRE 65
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
AAEQLEERQS WAYS+P++VLD++WNL FV+VA VL +S +E P +PLRL IVGYA+Q
Sbjct: 66 AAAEQLEERQSDWAYSKPVVVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRLWIVGYAMQ 125
Query: 126 CLFHVFCVSLEFK-------------RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEN 172
C+ H+ V +E++ + R G S S + + + G+
Sbjct: 126 CVLHMVFVCVEYRRRRRQQPAAASSVQDRVGSSSGNLSVSSREGSASASASAQNVLLGQL 185
Query: 173 D---SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVM 229
D +SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+
Sbjct: 186 DDESTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVV 245
Query: 230 ICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLH 289
CV +AC+IGIAVCCCLPCI+ +LYA+T++EGA++E+I++L KFKF RI+ EK+ G +
Sbjct: 246 FCVALACIIGIAVCCCLPCIIALLYAVTDQEGASKEDIEQLSKFKFRRIESNEKLTGTIQ 305
Query: 290 LP 291
P
Sbjct: 306 GP 307
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 194/273 (71%), Gaps = 23/273 (8%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
CV++E++ R R G ++ DEE G SS+AK+LES NT SF+
Sbjct: 126 VCVAIEYRFRHRQRG-----------GPSMAADEERGTDGS--SSIAKHLESGNTMFSFI 172
Query: 191 WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCIL 250
WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+
Sbjct: 173 WWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCII 232
Query: 251 GILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
ILYA++++EGA+E++I ++P++KF +D EK
Sbjct: 233 AILYAVSDQEGASEDDIRQIPRYKFRTMDETEK 265
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/285 (51%), Positives = 197/285 (69%), Gaps = 16/285 (5%)
Query: 6 PADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
P T + S P H R+ LR AAR LR A RR+M REPS+ VRE
Sbjct: 40 PPTVTRTISVDEESNPIHRSARRQGLRE--------AARFLRHAGSRRMM-REPSMLVRE 90
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
TAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+ +VGY +Q
Sbjct: 91 TAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQ 150
Query: 126 CLFHVFCVSLEFKRRRRG----EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE 181
C H+ CV +E++RRRR +G G + S S E+R GE S+ AK+LE
Sbjct: 151 CWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDR--GET-SNPAKHLE 207
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
SANT SF+WWI+GFYW++A G+TL S SPQLYWLC+ FL FDV FV+ CV +AC+IG+A
Sbjct: 208 SANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLA 267
Query: 242 VCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
VCCCLPCI+ ILYA+ ++EGA++ +ID++PKF+F++ +EK++G
Sbjct: 268 VCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSG 312
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 206/310 (66%), Gaps = 24/310 (7%)
Query: 4 NPPADAAETSPLLAHSL--PDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSV 61
+ P A +T+PLL + P+ R L R ++GAA R LRRAS RR+M REPS+
Sbjct: 12 SSPDVAVDTTPLLGNGTGSPNASDDGARSLSRRAS-IQGAA-RFLRRASSRRIM-REPSM 68
Query: 62 RVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVG 121
VRETAAEQLEERQS WAYSRP++VLD++WNL FV+VA VL +S +E P +P+R+ +VG
Sbjct: 69 LVRETAAEQLEERQSDWAYSRPVVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVG 128
Query: 122 YALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT---------GDEEERFHGEN 172
YALQCL H+ CV E++RR +S S T G+++E +
Sbjct: 129 YALQCLLHMICVCFEYRRRHSNAQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATD 188
Query: 173 D----------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
+ +S+AK LESANT SF+WWIVGFYWI+A G+ L +PQLYWLCV FLA
Sbjct: 189 EEVDEVLSTERTSIAKRLESANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLA 248
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLE 282
FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I LPK+KF I G E
Sbjct: 249 FDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDIGLLPKYKFKSIGGSE 308
Query: 283 KVNGVLHLPF 292
K++G PF
Sbjct: 309 KISGEKSGPF 318
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 16/248 (6%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R G
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRG---------- 140
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
++ DEE G SS+AK+LES NT SF+WWI+GFYW++A GE LI +PQLYW
Sbjct: 141 -GPSMAADEERGSDG--SSSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYW 197
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
LC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF
Sbjct: 198 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKF 257
Query: 276 SRIDGLEK 283
RI+ EK
Sbjct: 258 RRINEPEK 265
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 194/260 (74%), Gaps = 12/260 (4%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGAT 263
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGAS 268
Query: 264 EEEIDRLPKFKFSRIDGLEK 283
E++I ++PK+KF R+D EK
Sbjct: 269 EDDIRQIPKYKFRRVDEPEK 288
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 194/260 (74%), Gaps = 12/260 (4%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGAT 263
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGAS 268
Query: 264 EEEIDRLPKFKFSRIDGLEK 283
E++I ++PK+KF R+D EK
Sbjct: 269 EDDIRQIPKYKFRRVDEPEK 288
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 194/260 (74%), Gaps = 12/260 (4%)
Query: 31 LRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVL 90
LRRP LRGAA RLLRR SGRR M REPS+ VRE AAE LEERQ+ WAYSRP++ LD+L
Sbjct: 34 LRRPS--LRGAA-RLLRR-SGRRAM-REPSMLVREAAAEHLEERQADWAYSRPVVALDLL 88
Query: 91 WNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVF 148
WN+ F+ VA VL +S NE +PLR + GYALQC+ H+ CV++E++ RR RG G V
Sbjct: 89 WNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYRMRRSQRGGGPVP 148
Query: 149 GDSVSGSSSTTVTGDE---EERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASG 203
D GS ++ + DE E + G + S+AK+LESANT SF+WWI+GFYWI+A G
Sbjct: 149 ADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWISAGG 208
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGAT 263
E +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+
Sbjct: 209 EEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGAS 268
Query: 264 EEEIDRLPKFKFSRIDGLEK 283
E++I ++PK+KF R+D EK
Sbjct: 269 EDDIRQIPKYKFRRVDEPEK 288
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 145/278 (52%), Positives = 195/278 (70%), Gaps = 23/278 (8%)
Query: 11 ETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQ 70
+++PLL R R +LRRP LRG A RLLR+ GRR M REPS+ VRETAAEQ
Sbjct: 16 DSAPLLGGG-----TRRRGVLRRPS--LRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQ 65
Query: 71 LEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHV 130
LEERQ+ WAYSRP++ LD+LWNL F++V+ VL S +E P VPLR+ I GYA+QC+ H+
Sbjct: 66 LEERQADWAYSRPVVALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHI 125
Query: 131 FCVSLE--FKRRRRGEGVVFGDSVSGSSSTTVTGDEEERF---HGENDSSVAKNLESANT 185
CV++E F+ R+RG + D G+ ++ + DE+ HG LES NT
Sbjct: 126 VCVAIEYRFRHRQRGGPSMAADEERGTDGSSSSTDEDAGVSIPHGR--------LESGNT 177
Query: 186 FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCC 245
SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCC
Sbjct: 178 MFSFIWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 237
Query: 246 LPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
LPCI+ ILYA++++EGA+E++I ++P++KF +D EK
Sbjct: 238 LPCIIAILYAVSDQEGASEDDIRQIPRYKFRTMDETEK 275
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 190/255 (74%), Gaps = 10/255 (3%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR SGRR M REPS+ VRE AA+QLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-RFLRR-SGRRAM-REPSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDSVS 153
++VA AVL +S E P +PLRL IVGYA+QC+ H+ CV++E++ RR GE + D +
Sbjct: 96 ILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEET 155
Query: 154 GSSSTTV-----TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
G+ ++ G+ R + +AK+LESANT SF+WWI+GFYW++A G+ L
Sbjct: 156 GTDGSSSSSDEDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFYWVSAGGQVLTH 215
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEID 268
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I
Sbjct: 216 DAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIR 275
Query: 269 RLPKFKFSRIDGLEK 283
++P++KF R+D EK
Sbjct: 276 QIPRYKFRRMDEPEK 290
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 199/287 (69%), Gaps = 16/287 (5%)
Query: 8 DAAETSPLLAH-SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
D +T+PLL+ S + SRR R AAR LRRAS R M+REPS+ VRET
Sbjct: 18 DIVDTTPLLSSGSQGESNSSSRRQSLRE-------AARFLRRAS-SRRMMREPSMLVRET 69
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+P+++LD+LWN FV VA VL +S E P +PLRL IVGY LQC
Sbjct: 70 AAEQLEERQSDWAYSKPVVILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQC 129
Query: 127 LFHVFCVSLEFKRRRRGEGVV-FGDSVSGSSSTTVTGDEEERF------HGENDSSVAKN 179
+ H+ CV +E++RRRR V FG G+ S+ GD E + SSVAK+
Sbjct: 130 VLHMVCVCVEYRRRRRRRRRVGFGIGSDGNLSSGSRGDSGEYVTLAQLEDHDGTSSVAKH 189
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+ CV +AC+IG
Sbjct: 190 LESANTMFSFIWWIIGFYWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVALACIIG 249
Query: 240 IAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
IAVCCCLPCI+ ILYA+ ++EGA++E+I++L KFKF R+D EK+ G
Sbjct: 250 IAVCCCLPCIIAILYAVADQEGASKEDIEQLSKFKFRRVDNDEKLTG 296
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 185/252 (73%), Gaps = 11/252 (4%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR LR A RR M+REPS+ VRETAAEQLEERQS WAYS+P++ LD+LWNL FV + A
Sbjct: 67 AARFLRHAGSRR-MVREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVA 125
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +EKP +PLR+ +VGY +QC H+ CV +E++RRRR + G T +
Sbjct: 126 VLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHRSSSEDGGGPGFTNSS 185
Query: 162 GDE-------EERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLY 214
+ E+R GE S+ AK+LESANT SF+WWI+GFYW++A G+TL SPQLY
Sbjct: 186 QQQYVSLAQLEDR--GET-SNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSGDSPQLY 242
Query: 215 WLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFK 274
WLC+ FL FDV FV+ CV +AC+IG+AVCCCLPCI+ ILYA+ ++EGA++ +ID++PKF+
Sbjct: 243 WLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFR 302
Query: 275 FSRIDGLEKVNG 286
F++I EK++G
Sbjct: 303 FTKIGNDEKLSG 314
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/298 (47%), Positives = 182/298 (61%), Gaps = 22/298 (7%)
Query: 1 MRMNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPS 60
M P ++SPLL ++ R +AAR LRRA R M+REPS
Sbjct: 1 MERTRPDTGVDSSPLLESGTTNNEARGSAY---------QSAARFLRRAG-GRRMMREPS 50
Query: 61 VRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIV 120
+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L ++ E+P PLR+ I
Sbjct: 51 MMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPLRVWIA 110
Query: 121 GYALQCLFHVFCVSLEFKRRRRGEG------------VVFGDSVSGSSSTTVTGDEEERF 168
GYALQCL H+ V+ E+ RR R G+ V+ E R
Sbjct: 111 GYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQ 170
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
E SS+AK LES NT SF WWIVGFYW+ A G++L +P+LYWLC+ FLAFDV FV
Sbjct: 171 ETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFV 230
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
C VAC+IGIAVCCCLPCI+ ILYA+ ++GA+E EI+ LPK++F RI EK N
Sbjct: 231 AFCAAVACMIGIAVCCCLPCIIAILYAVANQDGASETEINLLPKYRFCRIGPSEKNNS 288
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/298 (46%), Positives = 182/298 (61%), Gaps = 22/298 (7%)
Query: 1 MRMNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPS 60
M P ++SPLL ++ R +AAR LRRA R M+REPS
Sbjct: 1 MERTRPDTGVDSSPLLESGTTNNEARGSAY---------QSAARFLRRAG-GRRMMREPS 50
Query: 61 VRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIV 120
+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L ++ E+P P+R+ I
Sbjct: 51 MMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVVILTSTLEERPTTPMRVWIA 110
Query: 121 GYALQCLFHVFCVSLEFKRRRRGEG------------VVFGDSVSGSSSTTVTGDEEERF 168
GYALQCL H+ V+ E+ RR R G+ V+ E R
Sbjct: 111 GYALQCLLHMIYVAYEYTRRNRQRSPSVGSAGGSESASSAGEQVNSQVGRAPQEAETGRQ 170
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
E SS+AK LES NT SF WWIVGFYW+ A G++L +P+LYWLC+ FLAFDV FV
Sbjct: 171 ETEERSSIAKRLESVNTMFSFFWWIVGFYWLLAGGKSLAEDAPRLYWLCIVFLAFDVFFV 230
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
C VAC+IGIAVCCCLPCI+ ILYA+ ++GA+E EI+ LPK++F RI EK N
Sbjct: 231 AFCAAVACMIGIAVCCCLPCIIAILYAVANQDGASETEINLLPKYRFCRIGPSEKNNS 288
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 192/255 (75%), Gaps = 10/255 (3%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVS 153
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R +RG + D
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRGGPSMAADEER 150
Query: 154 GSSSTTVTGDE---EERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
GS ++ + DE E HG + S+AK+LES NT SF+WWI+GFYW++A GE LI
Sbjct: 151 GSDGSSSSTDEDAGENVTHGRIGDCVSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIR 210
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEID 268
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I
Sbjct: 211 DAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIR 270
Query: 269 RLPKFKFSRIDGLEK 283
++P++KF RI+ EK
Sbjct: 271 QIPRYKFRRINEPEK 285
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 191/275 (69%), Gaps = 30/275 (10%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR SGRR M REPS+ VRE AA+QLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-RFLRR-SGRRAM-REPSLLVREAAADQLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGD--- 150
++VA AVL +S E P +PLRL IVGYA+QC+ H+ CV++E++ RR GE + D
Sbjct: 96 ILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQSGESPMAADEET 155
Query: 151 ----------------SVSGSSSTTVTGDEEERFHGENDS------SVAKNLESANTFLS 188
+ G + V F+ +N S S+AK+LESANT S
Sbjct: 156 GTDGSSSSSDEDAGERAPRGRNGDYVRSVGHHIFYPDNFSVHKSACSIAKHLESANTMFS 215
Query: 189 FLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPC 248
F+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPC
Sbjct: 216 FIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPC 275
Query: 249 ILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
I+ ILYA++++EGA+E++I ++P++KF R+D EK
Sbjct: 276 IIAILYAVSDQEGASEDDIRQIPRYKFRRMDEPEK 310
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/301 (52%), Positives = 199/301 (66%), Gaps = 29/301 (9%)
Query: 4 NPPAD--AAETSPLLAHSLPDHLIRSRRLLRRP---PPPLRGAAARLLRRASGRRLMLRE 58
NP D A +T P L RR LRR PPLR A RRAS R+MLRE
Sbjct: 5 NPTLDSTAGDTEPFL-----------RRTLRRTIHHTPPLR-TATHFFRRASSHRMMLRE 52
Query: 59 PSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLR 118
PSVRVRE AA ++E RQ WAYS+P++ LD+ WNL F++V+ VLG+S E+P VPLR+
Sbjct: 53 PSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRVW 112
Query: 119 IVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSS----STTVTGDEEERFHGENDS 174
I+GY LQ L H CV LEF+RRRRG + DSV + ++ + + H ++
Sbjct: 113 ILGYLLQGLVHSVCVVLEFRRRRRGSYLEDDDSVLENGLRWSFSSESDSDFASEHESEEN 172
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+ K++ESANT LSF+WWI+GFYW+T G++L SPQLYWLC+TFLAFDVV V+ICV V
Sbjct: 173 SIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAV 232
Query: 235 ACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRI-------DGLEKVNGV 287
ACLIGIAVCCCLPCIL ILYA+ + +GAT EEID+LPK+KF I D E GV
Sbjct: 233 ACLIGIAVCCCLPCILAILYAVAD-QGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGV 291
Query: 288 L 288
+
Sbjct: 292 M 292
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 182/254 (71%), Gaps = 16/254 (6%)
Query: 45 LLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLG 104
LR+ASGRR M REPSV VRE AAEQLEERQS WAYS+P+++LD++WN FVIVA L
Sbjct: 47 FLRQASGRRTM-REPSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALF 105
Query: 105 VSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS--------- 155
+S NE PE+PLRL I GY LQC+ H+ CV E++RRRR + ++V+GS
Sbjct: 106 LSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGSDRIGSGNFS 165
Query: 156 ----SSTTVTGDEEERF--HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
S + V+G E +SVAK+LESANT SF+WWI+GFYW++A G+ L
Sbjct: 166 SREGSRSAVSGSSYVSLAQFDEESTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQD 225
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDR 269
SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++
Sbjct: 226 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQ 285
Query: 270 LPKFKFSRIDGLEK 283
L KFKF +++ EK
Sbjct: 286 LSKFKFRKVESNEK 299
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/254 (55%), Positives = 184/254 (72%), Gaps = 22/254 (8%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRG A RLLR+ GRR M REPS+ VRETAAEQLEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 34 PSLRGTA-RLLRQG-GRRAM-REPSLLVRETAAEQLEERQADWAYSRPVVALDLLWNLAF 90
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++VA VL +S +E P VPLR+ I GYA+QC+ H+ CV++E++ R G
Sbjct: 91 ILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHGQRG---------- 140
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
++ DEE G SS+AK+LES NT SF+WWI+GFYW++A GE LI +PQLYW
Sbjct: 141 -GPSMAADEERGSDG--SSSIAKHLESGNTMFSFIWWIIGFYWVSAGGEVLIRDAPQLYW 197
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER------EGATEEEIDR 269
LC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++ EGA+E++I +
Sbjct: 198 LCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQVWLLTYEGASEDDIRQ 257
Query: 270 LPKFKFSRIDGLEK 283
+P++KF RI+ EK
Sbjct: 258 IPRYKFRRINEPEK 271
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/281 (50%), Positives = 193/281 (68%), Gaps = 19/281 (6%)
Query: 9 AAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
E +PL+ L D R + R+ LR AARLLR AS R+M+REPS+ VRE AA
Sbjct: 6 TTEATPLI---LTDGGGGGRSVRRQG---LR-EAARLLRHASSGRMMMREPSMLVREAAA 58
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLF 128
EQLEERQS WAYS+P++VLD +WNL FV VA AVL +S +E P +PLR+ ++GY LQC+
Sbjct: 59 EQLEERQSDWAYSKPVVVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVWVIGYGLQCMM 118
Query: 129 HVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG-----DEEERF------HGENDSSVA 177
H+ CV +E++RR S SS G + ++R+ EN+S A
Sbjct: 119 HMVCVCVEYRRRNSRRRRDMSPRSSSSSMEEEDGLGLSRNSDDRYLELGQLENENNS-FA 177
Query: 178 KNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACL 237
K+LESANT +SF+WW++GFYW+++ G+ L SPQLYWLC+ FL FDV FV+ CV +AC+
Sbjct: 178 KHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACV 237
Query: 238 IGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRI 278
IGIAVCCCLPCI+ +LYA+ E+EGA++E+ID+L KFKF ++
Sbjct: 238 IGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKV 278
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 201/305 (65%), Gaps = 30/305 (9%)
Query: 8 DAAETSPLLAHS--LPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRE 65
D +++PLLA+S D L R AAR LRRASGRR+M REPS+ VRE
Sbjct: 10 DIVDSTPLLANSGGSSDELTSGRGF---SRRQRLRQAARFLRRASGRRMM-REPSMLVRE 65
Query: 66 TAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQ 125
AAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S +E P +PLRL IVGYA+Q
Sbjct: 66 AAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRLWIVGYAMQ 125
Query: 126 CLFHVFCVSLEFK-------------RRRRGEGVVFG------DSVSGSSSTTVTGDEEE 166
C+ H+ CV +E++ + R G S SGS+ G ++
Sbjct: 126 CVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQYVSLGQLDD 185
Query: 167 RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVV 226
+SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV
Sbjct: 186 E-----GTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVF 240
Query: 227 FVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF RI+ EK+ G
Sbjct: 241 FVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKLTG 300
Query: 287 VLHLP 291
+ P
Sbjct: 301 TIQGP 305
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 187/255 (73%), Gaps = 10/255 (3%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA RLLR GRR M REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F
Sbjct: 35 PSLRGAA-RLLR-CGGRRAM-REPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAF 91
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVS 153
++V+ VL +S +E P +PLR I GY QC+ H+ CV++E+ R + G + D S
Sbjct: 92 ILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYCLRYGQLGGSPIPVDEES 151
Query: 154 GSSSTTVTGDEEERFHGENDSS-----VAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
GS S + + +++R HG + S +AK+LESANT SF+WWI+GFYW++A GE L
Sbjct: 152 GSGSASSSSSDDDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTR 211
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEID 268
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I
Sbjct: 212 DAPQLYWLCIIFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIR 271
Query: 269 RLPKFKFSRIDGLEK 283
++PK+KF +++ EK
Sbjct: 272 QIPKYKFRKMEEPEK 286
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/265 (55%), Positives = 193/265 (72%), Gaps = 11/265 (4%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA +LLRR GRR M REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F
Sbjct: 39 PSLRGAA-QLLRRG-GRRAM-REPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR---RRGEGVVFGDSV 152
+ VA VL +S +E +PLR + GYALQC+ H+ CV++E++ R R G G D
Sbjct: 96 ITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHGQRGGAGAAPADEE 155
Query: 153 SGSSSTTVTGDEEERF---HGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLI 207
GS ++ + DE++R HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I
Sbjct: 156 RGSDGSSSSSDEDDRELDRHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVI 215
Query: 208 SCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEI 267
+PQLYWLC+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I
Sbjct: 216 RDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDI 275
Query: 268 DRLPKFKFSRIDGLEKVNGVLHLPF 292
++P++KF R D EK + PF
Sbjct: 276 RQIPRYKFRRTDEPEKQDVDPMGPF 300
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 168/265 (63%), Gaps = 17/265 (6%)
Query: 12 TSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQL 71
++P AH+ L+R RR+ R P A LL R R PSV VRETAA +L
Sbjct: 2 STPNYAHA---PLLRPRRVGRTP------VLALLLGR--------RGPSVLVRETAAREL 44
Query: 72 EERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVF 131
EER++ W YS+P+++LDV WN VFV+VA +LG S++E P P+RL I GYA+QCL HV
Sbjct: 45 EERRADWGYSKPVVLLDVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVA 104
Query: 132 CVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLW 191
V LE++RR G D S D++ F + S AK S NT LS LW
Sbjct: 105 LVLLEYRRRNVIGGGRERDEESLDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLW 164
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILG 251
W+VGFYW+ G+ LI +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+G
Sbjct: 165 WMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIG 224
Query: 252 ILYALTEREGATEEEIDRLPKFKFS 276
ILYA+ +EGA+E ++ LPK++F
Sbjct: 225 ILYAVAGQEGASESDLSTLPKYRFQ 249
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/256 (55%), Positives = 185/256 (72%), Gaps = 13/256 (5%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR RR+M REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL F
Sbjct: 38 PSLRGAA-RFLRRTGSRRMM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V VA AVL S+ E+P VPLR + GY LQCL HV CV++E+KRR R ++ SG
Sbjct: 96 VAVAAAVLAASLTERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------EARSGG 148
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D+++ G+ S+ K+LES NT SF+WWI+GFYW++A G+TL +PQLYW
Sbjct: 149 AGV----DQDDAGDGDLKISIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYW 204
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
L + FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++EGA+EE+I+ L K+KF
Sbjct: 205 LSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKYKF 264
Query: 276 SRIDGLEKVNGVLHLP 291
+ +K+ + P
Sbjct: 265 RTMGEADKLVAGIAAP 280
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/254 (55%), Positives = 182/254 (71%), Gaps = 20/254 (7%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSR 277
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++EGA+E++I+ L KFKF
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEDDINNLSKFKFQT 263
Query: 278 IDGLEKVNGVLHLP 291
+ +K+ + P
Sbjct: 264 MSDADKLAAGIAAP 277
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/253 (52%), Positives = 174/253 (68%), Gaps = 8/253 (3%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LRRA RRLM REPS+ VRE+AAEQLE RQS WAYS+P++VLD++WNL FV V+
Sbjct: 6 GAARFLRRAGSRRLM-REPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVQVSL 64
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR----GEGVVFGDSVSGSS 156
AVL +S E LR+ I+GYALQC+ H+ CV E+ RR++ V + + +
Sbjct: 65 AVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQVNANPSSVSSSNSTYAP 124
Query: 157 STTVTGDEEERFHGE---NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQL 213
D + F + N++S AK LESANT SF+WW+VGFYWITA G++L +P +
Sbjct: 125 INNGENDVDSGFDDDGLSNEASWAKRLESANTMFSFVWWVVGFYWITAGGQSLAVDAPYV 184
Query: 214 YWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKF 273
YWLCV FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I+ LP
Sbjct: 185 YWLCVLFLTFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDINNLPTA 244
Query: 274 KFSRIDGLEKVNG 286
KF +I K+
Sbjct: 245 KFRKISSDGKITA 257
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 185/259 (71%), Gaps = 16/259 (6%)
Query: 36 PPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVF 95
P LRGAA R LRR RR+M REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL F
Sbjct: 38 PSLRGAA-RFLRRTGSRRMM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAF 95
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V VA AVL S+ E+P VPLR + GY LQCL HV CV++E+KRR R ++ SG
Sbjct: 96 VAVAAAVLAASLTERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCR-------EARSGG 148
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D+++ G+ S+ K+LES NT SF+WWI+GFYW++A G+TL +PQLYW
Sbjct: 149 AGV----DQDDAGDGDLKISIVKHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYW 204
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE---REGATEEEIDRLPK 272
L + FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T+ +EGA+EE+I+ L K
Sbjct: 205 LSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQVCQEGASEEDINNLSK 264
Query: 273 FKFSRIDGLEKVNGVLHLP 291
+KF + +K+ + P
Sbjct: 265 YKFRTMGEADKLVAGIAAP 283
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 177/251 (70%), Gaps = 18/251 (7%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R D
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEP 291
Query: 282 EKVNGVLHLPF 292
EK + PF
Sbjct: 292 EKQDVDPMGPF 302
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 168/260 (64%), Gaps = 14/260 (5%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
LIRSR+ R P + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LIRSRQSSPRRQPVI----AVLLNRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF++R
Sbjct: 68 VVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNAR 127
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASG 203
++ ++ + D +ERF K ES NT +SF+WWIVGFYW+ + G
Sbjct: 128 SRPGDLEAAQATNQDSEDEDNDERFLS------TKTCESMNTIISFVWWIVGFYWLVSGG 181
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGAT 263
+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+ +EGA+
Sbjct: 182 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGAS 241
Query: 264 EEEIDRLPKFKFSRIDGLEK 283
E ++ LPK++F ++ EK
Sbjct: 242 EADLSILPKYRFHTMNNDEK 261
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 177/251 (70%), Gaps = 18/251 (7%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R D
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEP 291
Query: 282 EKVNGVLHLPF 292
EK + PF
Sbjct: 292 EKQDVDPMGPF 302
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 182/255 (71%), Gaps = 21/255 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT-EREGATEEEIDRLPKFKFS 276
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T ++EGA+E++I+ L KFKF
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQQEGASEDDINNLSKFKFQ 263
Query: 277 RIDGLEKVNGVLHLP 291
+ +K+ + P
Sbjct: 264 TMSDADKLAAGIAAP 278
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 167/263 (63%), Gaps = 7/263 (2%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+R R+ P + + LL RA+GRR PS+ VRETAA +L+ER++ W YS+P
Sbjct: 11 LLRPRQDPPTSPTSRQTTLSALLGRATGRR----GPSMLVRETAARELDERRADWGYSKP 66
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD++WN FV+V+ +L V++ E+P P+R+ I GYALQCL HV V LE++RR
Sbjct: 67 VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTR 126
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGE---NDSSVAKNLESANTFLSFLWWIVGFYWIT 200
+ V +EE SSV K ES NT +SFLWW+VGFYW+
Sbjct: 127 RERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVV 186
Query: 201 ASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERE 260
+ G+ L+ +P LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +E
Sbjct: 187 SGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQE 246
Query: 261 GATEEEIDRLPKFKFSRIDGLEK 283
GA+E ++ +LPK+KF I EK
Sbjct: 247 GASEADLIQLPKYKFQMIRNEEK 269
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 182/257 (70%), Gaps = 23/257 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE---REGATEEEIDRLPKFK 274
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T+ +EGA+E++I+ L KFK
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQVSQEGASEDDINNLSKFK 263
Query: 275 FSRIDGLEKVNGVLHLP 291
F + +K+ + P
Sbjct: 264 FQTMSDADKLAAGIAAP 280
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 169/262 (64%), Gaps = 17/262 (6%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+RSR+ R PP + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LLRSRQSSPRRPPVI----AVLLGRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF R+R
Sbjct: 68 VVALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVLVWLEF--RKRN 125
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSV--AKNLESANTFLSFLWWIVGFYWITA 201
GD + S ++E+ ND + K ES NT +SF+WWI GFYW+ +
Sbjct: 126 ARTRTGDLEAAQGSGNHDSEDED-----NDERILSTKTCESMNTIISFIWWIAGFYWLVS 180
Query: 202 SGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREG 261
G+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+ +EG
Sbjct: 181 GGDILLQNATHLYWLTFIFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEG 240
Query: 262 ATEEEIDRLPKFKFSRIDGLEK 283
A+E ++ LPK++F ++ EK
Sbjct: 241 ASEADLSILPKYRFQALNNDEK 262
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 168/260 (64%), Gaps = 14/260 (5%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+RSR+ R P + A LL RASGRR S+ VRETAA++LEER++ W YS+P
Sbjct: 16 LLRSRQSSPRRQPVI----AVLLNRASGRR----GASMVVRETAAQELEERRADWGYSKP 67
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD+LWN FV+VA +L V EKP VP+R+ I GYA+QCL HV V LEF++R
Sbjct: 68 VVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNAR 127
Query: 144 EGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASG 203
++ ++ + D +ERF K ES NT +SF+WWIVGFYW+ + G
Sbjct: 128 SRPGDLEAAQATNQDSEDEDNDERFLS------TKTCESMNTIISFVWWIVGFYWLVSGG 181
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGAT 263
+ L+ + LYWL FLAFDV F + CV +ACLIGIA+CCCLPCI+ +LYA+ +EGA+
Sbjct: 182 DILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGAS 241
Query: 264 EEEIDRLPKFKFSRIDGLEK 283
E ++ LPK++F ++ EK
Sbjct: 242 EADLSILPKYRFHTMNNDEK 261
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 178/255 (69%), Gaps = 21/255 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S E P VPLR+ I GY LQCL H+ CV++E++RR R +
Sbjct: 102 VAAAVLAASTGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSR------------DAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + SV K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDFKL------SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALT-EREGATEEEIDRLPKFKFS 276
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T ++EGA+E++I+ L KFKF
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQQEGASEDDINNLSKFKFR 263
Query: 277 RIDGLEKVNGVLHLP 291
+ +K+ + P
Sbjct: 264 TMSDADKLAAGIAAP 278
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/257 (55%), Positives = 182/257 (70%), Gaps = 23/257 (8%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLYWL
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLYWLS 203
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE---REGATEEEIDRLPKFK 274
+ FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T+ +EGA+E++I+ L KFK
Sbjct: 204 IVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQVSQEGASEDDINNLSKFK 263
Query: 275 FSRIDGLEKVNGVLHLP 291
F + +K+ + P
Sbjct: 264 FQTMSDADKLAAGIAAP 280
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/251 (54%), Positives = 179/251 (71%), Gaps = 20/251 (7%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTTVTGDE 164
IVGYALQC+ H+ CVS+E++RRRR GV FG G SS VT
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQYVTLAN 179
Query: 165 EERFHGEND------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
+ H + SSVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+
Sbjct: 180 VDEHHSQTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCI 239
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRI 278
FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA++E+ID+L +FKF ++
Sbjct: 240 IFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKV 299
Query: 279 DGLEKVNGVLH 289
+EK++G +
Sbjct: 300 GDIEKIDGDIQ 310
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 180/249 (72%), Gaps = 25/249 (10%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTTVT--- 161
IVGYALQC+ H+ CVS+E++RRRR GV FG G SS VT
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQYVTLAS 179
Query: 162 -GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
GDE + +SVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ F
Sbjct: 180 LGDE-------SSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIF 232
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDG 280
L FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA++E+ID+L +FKF ++
Sbjct: 233 LGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGD 292
Query: 281 LEKVNGVLH 289
+EK++G +
Sbjct: 293 IEKIDGDIQ 301
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/236 (56%), Positives = 174/236 (73%), Gaps = 10/236 (4%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++VLD++WN FV+VA AVL +S E P +PLR
Sbjct: 61 EPSMLVRETAAEQLEERQSDWAYSKPVVVLDMIWNFAFVVVAAAVLVLSRRESPSMPLRF 120
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSS-- 175
IVGYALQC+ H+ CVS+E++RRRR GV GS + + DSS
Sbjct: 121 WIVGYALQCILHIVCVSVEYRRRRRRAGVF------GSEDDGIGSGGSYSSSPQGDSSQY 174
Query: 176 --VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
VAK+LESANT SF+WWI+GFYW++A G+ L SPQLYWLC+ FL FDV FV+ CV
Sbjct: 175 VTVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFFVVFCVA 234
Query: 234 VACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLH 289
+AC+IGIAVCCCLPCI+ ILYA+ ++EGA++E+ID+L +FKF ++ +EK++G +
Sbjct: 235 LACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKFRKVGDIEKIDGDIQ 290
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 152/237 (64%), Gaps = 5/237 (2%)
Query: 40 GAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVA 99
G A LL RA+GRR S+ VRETAA +LEER+ W YS+P++ LD+ WNL FV V+
Sbjct: 37 GPLALLLGRATGRR----GTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVS 92
Query: 100 FAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTT 159
VL S++EKP P+RL IV YA QCL HV V EFKRR
Sbjct: 93 LGVLIRSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQQPDGY 152
Query: 160 VTGDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
VT + +E G+ SSVAK ES NT +S +WW+ GFYW+ A G L+ +P LYWL V
Sbjct: 153 VTNESDEDDGGQRSLSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAV 212
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGAT+ ++ LPK+++
Sbjct: 213 VFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRY 269
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 152/237 (64%), Gaps = 5/237 (2%)
Query: 40 GAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVA 99
G A LL RA+GRR S+ VRETAA +LEER+ W YS+P++ LD+ WNL FV V+
Sbjct: 37 GPLALLLGRATGRR----GTSMLVRETAARELEERRIDWGYSKPVVALDITWNLAFVFVS 92
Query: 100 FAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTT 159
VL S++EKP P+RL IV YA QCL HV V EFKRR
Sbjct: 93 LGVLIHSVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQEPDGY 152
Query: 160 VTGDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
VT + +E G+ SSVAK ES NT +S +WW+ GFYW+ A G L+ +P LYWL V
Sbjct: 153 VTNESDEDDGGQRSFSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAV 212
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGAT+ ++ LPK+++
Sbjct: 213 VFLAFDVFFAVFCVVLACLIGIALCCCLPCIIAILYAVAGQEGATDADLSMLPKYRY 269
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 171/244 (70%), Gaps = 7/244 (2%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S E +PL
Sbjct: 1 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRGEDSPMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEEERF 168
R + GYALQC+ H+ CV++E++ RR R D S SSS +++ R
Sbjct: 61 RTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRG 120
Query: 169 HGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
+ S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV FV
Sbjct: 121 SCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVL 288
+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R D EK
Sbjct: 181 VFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQTADE 240
Query: 289 HLPF 292
PF
Sbjct: 241 TGPF 244
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 184/254 (72%), Gaps = 18/254 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATE 264
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+EGA++
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASK 270
Query: 265 EEIDRLPKFKFSRI 278
E+ID+L KFKF ++
Sbjct: 271 EDIDQLTKFKFRKV 284
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 184/254 (72%), Gaps = 18/254 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATE 264
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+EGA++
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASK 270
Query: 265 EEIDRLPKFKFSRI 278
E+ID+L KFKF ++
Sbjct: 271 EDIDQLTKFKFRKV 284
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 184/254 (72%), Gaps = 18/254 (7%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AARLLR AS R+M+REPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA A
Sbjct: 32 AARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATA 91
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL +S +E P +PLR+ I+GY LQC+ H+ CV +E++RR S SSS++ +
Sbjct: 92 VLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSS 151
Query: 162 G-DEEE----------------RFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
DEEE + EN+S AK+LESANT +SF+WW++GFYW+++ G+
Sbjct: 152 SMDEEEGLGLSRNSDERYLELGQLENENNS-FAKHLESANTMISFIWWVIGFYWVSSGGQ 210
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATE 264
L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+EGA++
Sbjct: 211 ELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASK 270
Query: 265 EEIDRLPKFKFSRI 278
E+ID+L KFKF ++
Sbjct: 271 EDIDQLTKFKFRKV 284
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 157/239 (65%), Gaps = 10/239 (4%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN+ FVIV+ +
Sbjct: 1976 ALLMGRATGRR----GPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVM 2031
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L + E+P P+RL I GYALQC HV V LE++RR R S +
Sbjct: 2032 LICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVN 2091
Query: 163 DEEER------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
D E+ G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL
Sbjct: 2092 DSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 2151
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA+E ++ LP+++F
Sbjct: 2152 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRF 2210
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 175/235 (74%), Gaps = 7/235 (2%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F++V+ VL +S +E P +PL
Sbjct: 52 MREPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPL 111
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND 173
R I GY QC+ H+ CV++E++ R + G + D SGS S + + +++R HG +
Sbjct: 112 RFWIAGYTAQCVVHMVCVAIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHS 171
Query: 174 SS-----VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
S +AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV
Sbjct: 172 RSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFV 231
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++PK+KF +++ EK
Sbjct: 232 VFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEK 286
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/261 (46%), Positives = 159/261 (60%), Gaps = 22/261 (8%)
Query: 33 RPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWN 92
R P + A LL R +GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN
Sbjct: 619 RQEAPRAASLAMLLGRVTGRR----GPSMLVRETAALELEERRADWGYSKPVVALDMVWN 674
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
FV+V+ +L +S+ EKP P+R+ I GYALQCL HV V +E++RR
Sbjct: 675 TAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRRVRDEERQQ 734
Query: 153 SGSSSTTVTGDEEERFHGEN-----------------DSSVAKNLESANTFLSFLWWIVG 195
V G EE GEN SSV K ES NT SFLWWIVG
Sbjct: 735 QQQQQAEVEGQHEEN-EGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMASFLWWIVG 793
Query: 196 FYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYA 255
FYW+ + G+ L+ +P LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA
Sbjct: 794 FYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYA 853
Query: 256 LTEREGATEEEIDRLPKFKFS 276
+ +EGA+E ++ LPK++F
Sbjct: 854 VAGQEGASEADLSILPKYRFQ 874
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 175/235 (74%), Gaps = 7/235 (2%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQ+ WAYSRP++ LD LWNL F++V+ VL +S +E P +PL
Sbjct: 1 MREPSLLVREAAAEQLEERQADWAYSRPVVALDFLWNLAFILVSAVVLVLSHHESPSMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND 173
R I GY QC+ H+ CV++E++ R + G + D SGS S + + +++R HG +
Sbjct: 61 RFWIAGYTAQCVVHMVCVAIEYRLRYGQLGGSPIPVDEESGSGSASSSSSDDDREHGSHS 120
Query: 174 SS-----VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
S +AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV
Sbjct: 121 RSGDCLSIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++PK+KF +++ EK
Sbjct: 181 VFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEK 235
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/251 (48%), Positives = 163/251 (64%), Gaps = 12/251 (4%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA +LEER++ W YS+P++ LD++WN+ FVIV+ +
Sbjct: 32 ALLMGRATGRR----GPSMLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVM 87
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L + E+P P+RL I GYALQC HV V LE++RR R S +
Sbjct: 88 LICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEEQQQQPQHSDSDVN 147
Query: 163 DEEER------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWL 216
D E+ G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL
Sbjct: 148 DSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 207
Query: 217 CVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS 276
V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA+E ++ LP+++F
Sbjct: 208 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFE 267
Query: 277 RIDGLEKVNGV 287
+ E+ +GV
Sbjct: 268 ANN--EEKSGV 276
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 178/247 (72%), Gaps = 13/247 (5%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LR+A+GRR M REPS+ VR+TAAEQLEERQS WAYSRP++VLD++WNL FV+VA
Sbjct: 35 GAARYLRQATGRRPM-REPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAV 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR-----RRGEGVVFGDSVSGS 155
AVL S E+PE PLR+ IVGYA+QCL H+ CV E++RR R G G S
Sbjct: 94 AVLVNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLS 153
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ + D E S++K LESANT SF+WW++GFYWITA G+ L SP+LYW
Sbjct: 154 AGSESEIDMEAH-------SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYW 206
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
L V FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I+ +P+FKF
Sbjct: 207 LSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDINLIPRFKF 266
Query: 276 SRIDGLE 282
R ++
Sbjct: 267 RRSGSID 273
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/247 (56%), Positives = 180/247 (72%), Gaps = 13/247 (5%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
AAR LR+A+GRR M REPS+ VR+TAAEQLEERQS WAYSRP++VLD++WNL FV+VA
Sbjct: 35 GAARYLRQATGRRPM-REPSMLVRQTAAEQLEERQSDWAYSRPVVVLDLMWNLAFVVVAV 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR-----RRGEGVVFGDSVSGS 155
AVL S E+PE PLR+ IVGYA+QCL H+ CV E++RR R G G ++ G
Sbjct: 94 AVLVNSKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPA--ENTVGH 151
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
S + + H S++K LESANT SF+WW++GFYWITA G+ L SP+LYW
Sbjct: 152 LSAGSESEIDMEAH-----SLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYW 206
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
L V FLAFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I+ +P+FKF
Sbjct: 207 LSVVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASEEDINLIPRFKF 266
Query: 276 SRIDGLE 282
R ++
Sbjct: 267 RRSGSID 273
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 181/276 (65%), Gaps = 24/276 (8%)
Query: 28 RRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVL 87
RR +RR LR AAR L RAS R+M REPS+ VRE AAEQLEERQS WAYS+P++VL
Sbjct: 48 RRSVRRQG--LR-EAARFLSRASSGRVM-REPSMLVREAAAEQLEERQSDWAYSKPVVVL 103
Query: 88 DVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVV 147
D++WNL FV VA A+L +S E P +PLR+ ++GYALQC+ H+ CV +E++RR R
Sbjct: 104 DIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNR 163
Query: 148 --------------------FGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFL 187
+ GS + D SSVAK+LESANT
Sbjct: 164 TTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMF 223
Query: 188 SFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLP 247
SF+WWI+GFYW++A G+ L SP++YWL + FL FDV FV+ CV +AC+IGIAVCCCLP
Sbjct: 224 SFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLP 283
Query: 248 CILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
CI+ +LYA+ ++EGA++E+I++L KFKF ++ K
Sbjct: 284 CIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANK 319
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/250 (55%), Positives = 175/250 (70%), Gaps = 13/250 (5%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR L R RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL FV VA A
Sbjct: 46 AARFLGRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAA 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL S+ E P VPLR+ + GY LQCLFHV CV++E++RRR +
Sbjct: 105 VLAASLPESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRRE------------ARGGGFG 152
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D+ G+ S+ K+LESANT SF+WWI+GFYWI+A G+ L +PQLYWL + FL
Sbjct: 153 ADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFL 212
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++EGA+EE+I+ L KFKF +
Sbjct: 213 AFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKFKFRTMGDA 272
Query: 282 EKVNGVLHLP 291
+K+ + P
Sbjct: 273 DKLVAGIAAP 282
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/250 (55%), Positives = 175/250 (70%), Gaps = 13/250 (5%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFA 101
AAR L R RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLDVLWNL FV VA A
Sbjct: 46 AARFLGRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDVLWNLAFVAVAAA 104
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL S+ E P VPLR+ + GY LQCLFHV CV++E++RRR +
Sbjct: 105 VLAASLPESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRRE------------ARGGGFG 152
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D+ G+ S+ K+LESANT SF+WWI+GFYWI+A G+ L +PQLYWL + FL
Sbjct: 153 ADQGAAADGDFKLSIVKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFL 212
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+T++EGA+EE+I+ L KFKF +
Sbjct: 213 AFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVTDQEGASEEDINNLSKFKFRTMGDA 272
Query: 282 EKVNGVLHLP 291
+K+ + P
Sbjct: 273 DKLVAGIAAP 282
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 178/285 (62%), Gaps = 15/285 (5%)
Query: 9 AAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
+++T+P A L+RSR R P P A A LL RA GRR PS+ VRETAA
Sbjct: 2 SSQTAPTEAPEPYTPLLRSRTDAGRGPAP---ALALLLGRA-GRR----GPSMLVRETAA 53
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLF 128
+LEER++ W YS+P++ LD+ WN+ FV+V+ A+L + +E P P+R+ IVGYALQCL
Sbjct: 54 RELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLV 113
Query: 129 HVFCVSLEFKRRRRGEGVVFGDSVSG-------SSSTTVTGDEEERFHGENDSSVAKNLE 181
HV V LE++RR R + + D + + S AK E
Sbjct: 114 HVLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCE 173
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIA 241
S NT +SFLWWIVGFYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA
Sbjct: 174 SLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 233
Query: 242 VCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
+CCCLPCI+ ILYA+ +EGA+E ++ LPK+KF + ++K +G
Sbjct: 234 LCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSG 278
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 166/233 (71%), Gaps = 9/233 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+RE S+ VRETA EQL+ERQS WAYSRP++VLD++WNL FV VA VL +S +E+P PL
Sbjct: 1 MRESSILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSGSSSTTVTGDEEERFHGE 171
R+ ++GYALQC+ H+ CV E++RR G G+ D + + ++ +E+ R
Sbjct: 61 RIWVLGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELED-MEDNEIDHISNEEKHRLLTG 119
Query: 172 ND----SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVF 227
+ S+AK LESANT SF+WW+VGFYWITA E L+ SP++YWLC+ FLAFDV F
Sbjct: 120 SSFFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFF 179
Query: 228 VMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDG 280
V+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I LP KF R+
Sbjct: 180 VVFCVALACMIGIAVCCCLPCIIAILYAVVDQEGASEEDISVLPTLKFKRVKS 232
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 161/230 (70%), Gaps = 7/230 (3%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+RE S+ VRETA EQL+ERQS WAYSRP++VLD++WNL FV VA VL +S +E+P PL
Sbjct: 1 MRESSILVRETAVEQLDERQSDWAYSRPVVVLDLIWNLAFVTVALVVLVISQSEQPCTPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSGSSSTTVTGDEEERFHGE 171
R+ ++GYALQC+ H+ CV E++RR G G+ D ++ G
Sbjct: 61 RIWVLGYALQCVLHMSCVVSEYRRRRRRRSSGAGMELEDMEDNEIDHISNEEKHSLLTGS 120
Query: 172 ND---SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFV 228
+ S+AK LESANT SF+WW+VGFYWITA E L+ SP++YWLC+ FLAFDV FV
Sbjct: 121 SFFPFCSLAKRLESANTMFSFVWWVVGFYWITAGSEALVQSSPRVYWLCIVFLAFDVFFV 180
Query: 229 MICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRI 278
+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I LP KF R+
Sbjct: 181 VFCVALACMIGIAVCCCLPCIIAILYAVVDQEGASEEDISVLPTLKFKRV 230
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 165/257 (64%), Gaps = 12/257 (4%)
Query: 32 RRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLW 91
R P P L A LL RA GRR PS+ VRETAA +LEER++ W YS+P++ LD+ W
Sbjct: 27 RAPVPTL----ALLLGRA-GRR----GPSMLVRETAARELEERRADWGYSKPVVALDMSW 77
Query: 92 NLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS 151
N+ FV+V +L + E+P P+R+ IVGYALQCL HV V LE++RR R + G
Sbjct: 78 NMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSH-HGQR 136
Query: 152 VSGSSSTTVTGDEEERFHGENDS--SVAKNLESANTFLSFLWWIVGFYWITASGETLISC 209
S +GDE+ + S S K E NT +SFLWWIVGFYW+ + G L+
Sbjct: 137 ARDVESDAGSGDEDYSDDRDWSSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQD 196
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDR 269
+P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA+E ++
Sbjct: 197 APRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSM 256
Query: 270 LPKFKFSRIDGLEKVNG 286
LPK++F + +K +G
Sbjct: 257 LPKYRFRILSDEDKPSG 273
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 175/249 (70%), Gaps = 18/249 (7%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S NE P +PL
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRNEHPIMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGD---EEE-----R 167
R+ ++GYALQC+ H+ CV +E++RR R + SS++ + EE+ R
Sbjct: 61 RVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTPRSRSSSSSSSSSSLEEDALGSRR 120
Query: 168 FHGEND----------SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
GE D SSVAK+LESANT SF+WWI+GFYW++A G+ L SP++YWL
Sbjct: 121 NSGEQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLS 180
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSR 277
+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF +
Sbjct: 181 IVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRK 240
Query: 278 IDGLEKVNG 286
+ + G
Sbjct: 241 VGDANRHTG 249
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 162/269 (60%), Gaps = 24/269 (8%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQS 76
S P+ + +S L P P AAARL L GRR S VRETAA +LEER++
Sbjct: 2 SSPNSVPQSHAPLLLPRP---DAAARLPILALLLGRR----GHSAVVRETAARELEERRA 54
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W YS+P++ LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE
Sbjct: 55 DWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLE 114
Query: 137 FKRRRRGEGVVFGDSVSGSS---STTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWI 193
++RR D S +S DE+ RF K S NT +S LWW+
Sbjct: 115 YRRRNDAPR----DEESAASLQYDDVNDSDEDARF--------TKRCASLNTMISLLWWM 162
Query: 194 VGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
VGFYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ IL
Sbjct: 163 VGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 222
Query: 254 YALTEREGATEEEIDRLPKFKFSRIDGLE 282
YA+ +EGA+E ++ LPK++F + E
Sbjct: 223 YAVAGQEGASESDLSILPKYRFQLLSNEE 251
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 165/248 (66%), Gaps = 20/248 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S E P +PL
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVV--------------------FGDSVSGS 155
R+ ++GYALQC+ H+ CV +E++RR R + GS
Sbjct: 61 RVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGS 120
Query: 156 SSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
+ D SSVAK+LESANT SF+WWI+GFYW++A G+ L SP++YW
Sbjct: 121 RRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYW 180
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
L + FL FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF
Sbjct: 181 LSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKF 240
Query: 276 SRIDGLEK 283
++ K
Sbjct: 241 RKLGDANK 248
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/286 (51%), Positives = 185/286 (64%), Gaps = 31/286 (10%)
Query: 7 ADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
ADA +T+PLL S+ D ++RSRRL+RRPP LRGAA R LRRAS RR+M REPS+RVRET
Sbjct: 8 ADATDTTPLLHASVSDQILRSRRLIRRPPS-LRGAA-RFLRRASSRRIM-REPSMRVRET 64
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
AAEQLEERQS WAYS+PI++LD++WNL FV+VA VL +S +E P PLRL I+GY LQC
Sbjct: 65 AAEQLEERQSDWAYSKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQC 124
Query: 127 LFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
+ H+ C+ +E+KRRR + +V S E D + +E N
Sbjct: 125 VLHMVCICVEYKRRRH---LASSGAVERSGGWGSGHLSSSSGSDEGD-PIDYRVEVRNRV 180
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
ET LC+ FLAFDV FV+ICV VAC+IGIAVCCCL
Sbjct: 181 ---------------EDETR---------LCIVFLAFDVFFVVICVAVACVIGIAVCCCL 216
Query: 247 PCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
PCI+ ILY + ++EGAT+EEI+RLPK+KF RI EK+NG + F
Sbjct: 217 PCIIAILYTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESF 262
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 157/258 (60%), Gaps = 15/258 (5%)
Query: 32 RRPPPPL----RGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPII 85
R+P PL AAARL L GRR SV VRETAA +LEER++ W YS+P++
Sbjct: 8 RQPHAPLLLPRPDAAARLPVLALLLGRR----GHSVMVRETAARELEERRADWTYSKPVV 63
Query: 86 VLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEG 145
LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE++RR G
Sbjct: 64 ALDMTWNMAFVVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPG 123
Query: 146 VVFGDSVSG---SSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
DS + D+ + + K S NT +S LWW+VGFYW+ +
Sbjct: 124 --DEDSAANLDYDDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSG 181
Query: 203 GETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGA 262
G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA
Sbjct: 182 GDILLQDAPRLYWLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGA 241
Query: 263 TEEEIDRLPKFKFSRIDG 280
+E ++ LPK++F +
Sbjct: 242 SESDLSILPKYRFQMLSN 259
>gi|413919226|gb|AFW59158.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 291
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 155/218 (71%), Gaps = 18/218 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPSV VRE AAE LEERQ+ WAYSRP++ LD+LWNL F+ VA VL +S +E +PL
Sbjct: 56 MREPSVLVREAAAEHLEERQADWAYSRPVVALDLLWNLAFITVAAVVLVLSRDEDSPMPL 115
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV------------TGD 163
R + GYALQC+ H+ CV++E+ R R G+ G +V+G++ V D
Sbjct: 116 RTWVAGYALQCVVHMICVAIEY-RMRHGQR---GSAVAGAAPADVERGSDASSSSSDEDD 171
Query: 164 EEERFHGE--NDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
E HG + +S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FL
Sbjct: 172 RELDLHGRRTDYASIAKHLESANTMFSFIWWIIGFYWISAGGEEVIQDAPQLYWLCIVFL 231
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
AFDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++
Sbjct: 232 AFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQ 269
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 161/269 (59%), Gaps = 14/269 (5%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARL--LRRASGRRLMLREPSVRVRETAAEQLEERQS 76
S P+ + +S L P P AAARL L GRR S VRETAA +LEER++
Sbjct: 2 SSPNSVPQSHAPLLLPRP---DAAARLPILALLLGRR----GHSAVVRETAARELEERRA 54
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W YS+P++ LD+ WN+ FV+V+ +L ++ E P P+R I GYALQCL HV V LE
Sbjct: 55 DWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLE 114
Query: 137 FKRRR---RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWI 193
++RR R E S+ D+ + S K S NT +S LWW+
Sbjct: 115 YRRRNDAPRDEES--AASLQYDDVNDSDEDDVGTSGSSSSSGFTKRCASLNTMISLLWWM 172
Query: 194 VGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL 253
VGFYW+ + G+ L+ +P+LYWL V FLAFDV F + CV +ACLIGIA+CCCLPCI+ IL
Sbjct: 173 VGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL 232
Query: 254 YALTEREGATEEEIDRLPKFKFSRIDGLE 282
YA+ +EGA+E ++ LPK++F + E
Sbjct: 233 YAVAGQEGASESDLSILPKYRFQLLSNEE 261
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/241 (47%), Positives = 153/241 (63%), Gaps = 26/241 (10%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A LL RA+GRR PS+ VRETAA +L+ER++ YS+P++ LD+LWN FV+V+ +
Sbjct: 1 AVLLGRATGRR----GPSMLVRETAARELDERRADLGYSKPVVALDILWNAAFVVVSVTM 56
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L V+ E+P P+RL I GY+LQCL HV V LE++ +T
Sbjct: 57 LVVTAKERPNTPIRLWICGYSLQCLVHVILVWLEYR----------------RRNTRRGR 100
Query: 163 DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
D E H K ES NT +SFLWWIVGFYW+ + G+ L+ +P+LYWL V FLA
Sbjct: 101 DVESEQH------FTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLA 154
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLE 282
FDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA+E ++ LPK+K+ + E
Sbjct: 155 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYKYLVMGNEE 214
Query: 283 K 283
K
Sbjct: 215 K 215
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 160/237 (67%), Gaps = 21/237 (8%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPL 115
+REPS+ VRE+AAEQLE RQS WAYS+P++VLD++WNL FV+++ AVL +S EK L
Sbjct: 1 MREPSMLVRESAAEQLEVRQSDWAYSKPVVVLDLIWNLAFVLLSLAVLVLSRKEKNCTEL 60
Query: 116 RLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSS 175
R+ IVGYALQC+ H+ CV E+ RR++ + +S S
Sbjct: 61 RIWIVGYALQCVVHMLCVCCEYLRRQQQQQQANANS---------------------SLS 99
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
AK LESANT SF+WWIVGFYWITA G++L +P +YWLCV FLAFDV FV+ CV +A
Sbjct: 100 WAKRLESANTMFSFVWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVALA 159
Query: 236 CLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
C+IGIAVCCCLPCI+ ILYA+ ++EGA+EE+I+ LP KF +I K G P
Sbjct: 160 CVIGIAVCCCLPCIIAILYAVADQEGASEEDINNLPSAKFRKIYSDGKGKGDTERPL 216
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 141/243 (58%), Gaps = 4/243 (1%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 38 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV 160
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR +S
Sbjct: 94 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIE 153
Query: 161 TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
E++ S K ES NT +SF+WWI+GFYW+ G+ L+ +P LYWL V F
Sbjct: 154 YDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIF 213
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDG 280
LA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+ EG +E E+ LP +KF
Sbjct: 214 LAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHS 273
Query: 281 LEK 283
EK
Sbjct: 274 NEK 276
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 159/253 (62%), Gaps = 7/253 (2%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LD+ WN+ F A AV
Sbjct: 47 AALIGRAAGRR----GPSMLVRETAALQLQRRRADWAHSRPVVALDIAWNVAFAAAAAAV 102
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVS-GSSSTTVT 161
L S E P PLRL +VGYA QCL HV V + +R R D S G+ + +
Sbjct: 103 LASSAEESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRARGSASDVESAGAGTDSSD 162
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
D E+ E SS E+ NT +SFLWWI+GFYW+ + GE L +P+LYWL V FL
Sbjct: 163 ADSEDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTVVFL 222
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS--RID 279
AFDV F + CV VAC IGIA+CCCLPC++ ILYAL +EGA++ +I LP+++FS D
Sbjct: 223 AFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQEGASDADISVLPRYRFSDPSED 282
Query: 280 GLEKVNGVLHLPF 292
G + + L +P
Sbjct: 283 GEKGTDEGLMIPI 295
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/266 (46%), Positives = 165/266 (62%), Gaps = 13/266 (4%)
Query: 34 PPP----PLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDV 89
PPP P R AA L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LD+
Sbjct: 37 PPPSAVRPSRLAA--LIGRAAGRR----GPSMLVRETAALQLQRRRADWAHSRPVLALDI 90
Query: 90 LWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG 149
WN+ F A AVL S E P PLRL +VGYA QCL HV V + +R R
Sbjct: 91 AWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHVGLVCADTRRETRRARRSAS 150
Query: 150 DSVS-GSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLIS 208
D S G+ + + D E+ E SS E+ NT +SFLWWI+GFYWI + GE L
Sbjct: 151 DVESAGAGTDSSDADSEDDERAEGRSSYTGRCETMNTLISFLWWIIGFYWIFSGGEVLEH 210
Query: 209 CSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEID 268
+P+LYWL + FLAFDV F + CV VAC IGIA+CCCLPC++ ILYAL +EGA++ +I
Sbjct: 211 GAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALCCCLPCVIAILYALAGQEGASDADIS 270
Query: 269 RLPKFKFSRI--DGLEKVNGVLHLPF 292
L ++++S DG + V+ L +P
Sbjct: 271 VLLRYRYSDPSEDGEKGVDEGLMIPI 296
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 147/248 (59%), Gaps = 7/248 (2%)
Query: 31 LRRPPPPLRGAAARLLRRAS--GRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLD 88
L PPP +AAR R A+ GR R PS+ V E QL R++ WA+SRP++ LD
Sbjct: 31 LSSPPP----SAARPSRLAALIGRVGWPRGPSMMVHEATTLQLHRRRADWAHSRPVVTLD 86
Query: 89 VLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVF 148
+ WN+ A VL S + P PLRL +VGYA QCL HV V + R R
Sbjct: 87 IAWNVACAAAAALVLASSAKDSPVKPLRLWLVGYAAQCLVHVGIVFTRLETRARHAWGPA 146
Query: 149 GDSVSGSSSTTVTG-DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLI 207
D S + T +G D E+ E SS A E+ N +SFLWWI+GFYW+ + GE L
Sbjct: 147 SDVESAGAGTDSSGTDSEDDETAEGRSSHASRCETINRLISFLWWIIGFYWLVSGGEVLE 206
Query: 208 SCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEI 267
+P+LYWL + FLAFDV F + CV ++C IGIA+CCCLPC++ ILYAL + GA++ +I
Sbjct: 207 YGAPRLYWLTIVFLAFDVFFAVFCVAMSCFIGIALCCCLPCVVAILYALAGKVGASDGDI 266
Query: 268 DRLPKFKF 275
LP++++
Sbjct: 267 SVLPRYRY 274
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 167/282 (59%), Gaps = 12/282 (4%)
Query: 3 MNPPADAAETSP---LLAHSLPDHLIRSRRLLRRPPPPLRGA-AARLLRRASGRRLMLRE 58
M P AD + SP LL PPP R + A L+ RA+GRR
Sbjct: 1 MEPAADDSPPSPQQPLLGSPYAGAASGPGNHQASPPPAARPSRLAALIGRAAGRR----G 56
Query: 59 PSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLR 118
PS+ VRETAA QLE R++ WA+SRP++ LDV WN+ F A AVL S E P PLRL
Sbjct: 57 PSMLVRETAALQLERRRADWAHSRPVVALDVAWNVAFAAAAAAVLAASAAESPAKPLRLW 116
Query: 119 IVGYALQCLFHVFCV----SLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDS 174
+VGYALQC+ HV V + R V D+ + + + D+++ + S
Sbjct: 117 LVGYALQCVVHVSLVCSGPGRRRRAARARGPDVESDAANAGPDGSGSEDDDDEEAMDERS 176
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S + ES NT +SFLWWI+GFYW+ + G+ L +P+LYWL V FLAFDV F + CV V
Sbjct: 177 SSVERCESVNTLVSFLWWIIGFYWVVSGGDMLEQGAPRLYWLTVVFLAFDVFFAVFCVAV 236
Query: 235 ACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS 276
AC IG+A+CCCLPC++ ILYAL +EGA++ +I LP++K+S
Sbjct: 237 ACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPRYKYS 278
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 158/239 (66%), Gaps = 11/239 (4%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
A L+ RA+GRR PS+ VRETAA QL+ R++ WA+SRP++ LDV WN+ F A AV
Sbjct: 47 AALIGRAAGRR----GPSMLVRETAALQLDRRRADWAHSRPVVALDVAWNVAFAAAAAAV 102
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR----RRGEGVVFGDSVSG-SSS 157
L S E P PLRL +VGYALQC+ HV V +RR RG + G + +G +SS
Sbjct: 103 LAASTAESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARGPDIESGAATAGANSS 162
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
+ G++EE E +S ES NT +SFLWWI+GFYW+ G+ L +P+LYWL
Sbjct: 163 ESDEGNDEEAM--EERASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYWLT 220
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS 276
V FLAFDV F + CV VAC IG+A+CCCLPC++ ILYAL +EGA++ +I LP++K+S
Sbjct: 221 VVFLAFDVFFAVFCVVVACFIGVALCCCLPCVVAILYALVGQEGASDADIGVLPRYKYS 279
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 145/249 (58%), Gaps = 27/249 (10%)
Query: 70 QLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFH 129
QLE R++ WA+SRP++ LD+ WN+ F A AVL S E P PLRL +VGYALQCL H
Sbjct: 2 QLERRRADWAHSRPVVALDIAWNVAFAAAAAAVLVASTEESPVTPLRLWLVGYALQCLVH 61
Query: 130 VFCVSLEFKRR---RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTF 186
V V + +RR R V D + + T + +++ E SS AK ES NT
Sbjct: 62 VGLVCSDSRRRPAHARSSDVESADGDAAGAGTDSSDSDDDDEGREQRSSFAKRCESINTM 121
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLC----------------------VTFLAFD 224
+SFLWWI+GFYW+ + G+ L +P+LYW C V FLAFD
Sbjct: 122 VSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKPVPITDYFMIVQSNVHMLSVVFLAFD 181
Query: 225 VVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS--RIDGLE 282
V F + CV +AC IGIA+CCCLPC++ ILYAL +EGA++ +I LP++++S DG +
Sbjct: 182 VFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQEGASDADIGFLPRYRYSDPSEDGQK 241
Query: 283 KVNGVLHLP 291
+ + +P
Sbjct: 242 GTDEGVMIP 250
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 134/191 (70%), Gaps = 24/191 (12%)
Query: 113 VPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS-------------VSGSSSTT 159
+PLR IVGYALQC+ H+ CVS+E++RRRR GV FG G SS
Sbjct: 1 MPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGV-FGSEDDGIGSGGSYSSSPQGDSSQY 59
Query: 160 VT----GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
VT GDE + SSVAK+LESANT SF+WWI+GFYW++A G+ L SPQLYW
Sbjct: 60 VTLASLGDES------STSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYW 113
Query: 216 LCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
LC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+ ILYA+ ++EGA++E+ID+L +FKF
Sbjct: 114 LCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAILYAVADQEGASKEDIDQLSRFKF 173
Query: 276 SRIDGLEKVNG 286
++ +EK++G
Sbjct: 174 RKVGDIEKIDG 184
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 27/206 (13%)
Query: 80 YSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKR 139
+S+PI+VLDV+WNL FV V+ VL + E+P PLR+ I GYALQCL HV V +F+R
Sbjct: 71 FSKPIVVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR 130
Query: 140 RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWI 199
R G+E+ SS+ K LES NT S +WW+ GF WI
Sbjct: 131 R--------------------NGNEDRH------SSIVKRLESMNTMFSSVWWVFGFCWI 164
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
A G+ L+ SP+LYWL V FLAFDV F+M C+G+AC+ A+ CC+P + I YA+ R
Sbjct: 165 LAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAMKIR 223
Query: 260 EGATEEEIDRLPKFKFSRIDGLEKVN 285
EGA+E++I LP+++F + KV+
Sbjct: 224 EGASEDDIRLLPRYRFCDASLVRKVD 249
>gi|414884509|tpg|DAA60523.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 209
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 123/177 (69%), Gaps = 20/177 (11%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P++VLD+LWNL FV
Sbjct: 44 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVA 101
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSS 157
VA AVL S+ E+P VPLR+ IVGY LQCL HV V++E++RRRR ++
Sbjct: 102 VAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVTVEYRRRRR------------NAD 149
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLY 214
GDE+ + S+ K+LESANT SF+WWIVGFYW++A G+ L +PQLY
Sbjct: 150 QEGAGDEDLKL------SIVKHLESANTMFSFIWWIVGFYWVSAGGKALSHDAPQLY 200
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 123/199 (61%), Gaps = 22/199 (11%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
+YS PI+VLDV+WNL FV+V+ VL + E+P PLRL I GY LQCL HV V E++
Sbjct: 70 SYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQ 129
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
R S G E+ H S+ K LES NT S +WW+ GFYW
Sbjct: 130 R-----------------SMAHHGFEDRTAH----RSIMKRLESMNTMTSSVWWVFGFYW 168
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I G+ L+ SP+LYWL V FLAFD+ F++ C+G+AC+I ++CCC+P I+ YA+T
Sbjct: 169 IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIP-IVAFAYAMTT 227
Query: 259 REGATEEEIDRLPKFKFSR 277
REGA+EE+I LPK+ F +
Sbjct: 228 REGASEEDIRTLPKYTFRQ 246
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 125/208 (60%), Gaps = 11/208 (5%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
++ +PI+VLD+ WNL FV ++ VL +S EKP PLR + GYA+QCLFHVF V + +
Sbjct: 70 SFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
RR + F + G ++E N V K LE+ NT ++++WW+ GFYW
Sbjct: 130 RRSSRYRLGFENR----------GAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYW 179
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I G+ L+ SP+LYWL V FLAFDV F++ C G+A + AVCC +P L Y +
Sbjct: 180 IVMGGQALLEGSPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMNF 238
Query: 259 REGATEEEIDRLPKFKFSRIDGLEKVNG 286
EGA+E+EI LPK++F + + LE +
Sbjct: 239 LEGASEDEIRALPKYRFHQDNPLESFDN 266
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Query: 109 EKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEER- 167
E+P P+RL I GYALQC HV V LE++RR R S + D E+
Sbjct: 8 ERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDED 67
Query: 168 -----FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
G N SSV K ES NT SFLWWIVGFYW+ + GE L+ +P+LYWL V FLA
Sbjct: 68 GNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLA 127
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKF 275
FDV F + CV +ACLIGIA+CCCLPCI+ ILYA+ +EGA+E ++ LP+++F
Sbjct: 128 FDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRF 180
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 138/243 (56%), Gaps = 27/243 (11%)
Query: 43 ARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAV 102
ARL+ AS RRL L + + R + AYSR ++VLD++WNL FV+ A V
Sbjct: 30 ARLIA-ASRRRLFLSDCADH-RSDDDGDSDADAGECAYSRAVLVLDMVWNLAFVVAAAGV 87
Query: 103 LGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTG 162
L ++ E+P PLRL + GYA +C+ H+ V EF+ R R DS S ++
Sbjct: 88 LLSTLRERPATPLRLWLCGYAFECVLHMAFVYFEFRTRIR-------DSFSHTTY----- 135
Query: 163 DEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
S+ K LE NT S +WW+ GFYWI G+ L+ SP LYWL V FLA
Sbjct: 136 ------------SIVKKLEPMNTLASSVWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLA 183
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLE 282
FDV F++ C+G+AC++ A+ C +P I+ + YA+ REGA+EE+I LP ++FS + L
Sbjct: 184 FDVFFIIFCIGMACIVFFALFCIIP-IIALAYAMRIREGASEEDIRSLPMYRFSLSNSLV 242
Query: 283 KVN 285
V+
Sbjct: 243 MVD 245
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 125/207 (60%), Gaps = 25/207 (12%)
Query: 79 AYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFK 138
AYSR ++VLD++WNL FV+VA VL ++ E+P PLRL + GYA +C+ H+ V EF+
Sbjct: 62 AYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR 121
Query: 139 RRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYW 198
R DS S ++ S+ K LE NT S +WWI GFYW
Sbjct: 122 TGIR-------DSFSHTAY-----------------SIVKKLEPMNTLASSVWWIFGFYW 157
Query: 199 ITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE 258
I + L+ SP+LYWL V FLAFDV F++ C+G+AC++ A+ C +P I+ + YA+
Sbjct: 158 IVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYAMRI 216
Query: 259 REGATEEEIDRLPKFKFSRIDGLEKVN 285
REGA+EE+I LP ++FS+ + L V+
Sbjct: 217 REGASEEDILSLPMYRFSQSNSLVMVD 243
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 129/187 (68%), Gaps = 7/187 (3%)
Query: 113 VPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEE 165
+PLR + GYALQC+ H+ CV++E++ RR R D S SSS +++
Sbjct: 1 MPLRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDD 60
Query: 166 ERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDV 225
R + S+AK+LESANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV
Sbjct: 61 RRGSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDV 120
Query: 226 VFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVN 285
FV+ CV +AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R D EK
Sbjct: 121 FFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQT 180
Query: 286 GVLHLPF 292
PF
Sbjct: 181 ADETGPF 187
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 22/195 (11%)
Query: 83 PIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR 142
PI+VLDV+WNL FV+V+ VL + E+P PLRL I GY LQCL HV V E++R
Sbjct: 2 PILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVGFVFFEYQR--- 58
Query: 143 GEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
S G E+ H S+ K LES NT S +WW+ GFYWI
Sbjct: 59 --------------SMAHHGFEDRTAH----RSIMKRLESMNTMTSSVWWVFGFYWIVMG 100
Query: 203 GETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGA 262
G+ L+ SP+LYWL V FLAFD+ F++ C+G+AC+ ++CCC+P I+ YA+T REGA
Sbjct: 101 GQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVXFFSLCCCIP-IVAFAYAMTTREGA 159
Query: 263 TEEEIDRLPKFKFSR 277
+EE+I LPK+ F +
Sbjct: 160 SEEDIRTLPKYTFRQ 174
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 25/207 (12%)
Query: 80 YSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKR 139
YSR ++V+D++WNL FV+VA AV+ + NE+P PLRL + GYA +CL HV V EF+
Sbjct: 35 YSRAVLVVDMVWNLAFVVVAAAVILSTFNERPSTPLRLWLCGYAFECLLHVAFVFSEFRV 94
Query: 140 RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWI 199
R DS S + S+AK LE NT S +WW+ GFYWI
Sbjct: 95 TTR-------DSFSHTPY-----------------SIAKKLEPMNTLASSVWWVFGFYWI 130
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTER 259
G+ L+ SP+LYWL V FLAFDV F++ C+G+AC++ A+ C +P I+ + YAL R
Sbjct: 131 VVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIP-IIALAYALRIR 189
Query: 260 EGATEEEIDRLPKFKFSRIDGLEKVNG 286
EGA+E++I LP ++FS+ + + V+
Sbjct: 190 EGASEDDISSLPMYRFSQSNVMVMVDD 216
>gi|118489291|gb|ABK96450.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 218
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 7/195 (3%)
Query: 24 LIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
L+R R+ P + + LL RA+GRR PS+ VRETAA +L+ER++ W YS+P
Sbjct: 11 LLRPRQDPPTSPTSRQTTLSALLGRATGRR----GPSMLVRETAARELDERRADWGYSKP 66
Query: 84 IIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG 143
++ LD++WN FV+V+ +L V++ E+P P+R+ I GYALQCL HV V LE++RR
Sbjct: 67 VVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTR 126
Query: 144 EGVVFGDSVSGSSSTTV--TGDEEERFHG-ENDSSVAKNLESANTFLSFLWWIVGFYWIT 200
+ V + DE++R SSV K ES NT +SFLWW+VGFYW+
Sbjct: 127 RERDIESQQQSTEEENVPESDDEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVV 186
Query: 201 ASGETLISCSPQLYW 215
+ G+ L+ +P+LYW
Sbjct: 187 SGGDVLLQNAPRLYW 201
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+ K+LESANT SF+WWI+GFYW++A G+ L +PQLYWL + FLAFDV FV+ C+ +
Sbjct: 3 SIVKHLESANTMFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIAL 62
Query: 235 ACLIGIAVCCCLPCILGILYALTER-EGATEEEIDRLPKFKFSRIDGLEKVNGVLHLP 291
AC+IGIAVCCCLPCI+GILYA+T++ EGA+E++++ L KFKF + +K+ + P
Sbjct: 63 ACVIGIAVCCCLPCIIGILYAVTDQEEGASEDDVNNLSKFKFRTMSDADKLAAGIAAP 120
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 126/256 (49%), Gaps = 55/256 (21%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 602 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 657
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR---RRGEGVVFGDSVSGSSS 157
+L ++ E+P P+R+ I GY LQCL HV V E+ RR RR + GD
Sbjct: 658 VMLVGTVEERPNEPIRVWICGYGLQCLIHVVLVWSEYWRRNTTRRARDLESGDH------ 711
Query: 158 TTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
++ + E DS + Y L
Sbjct: 712 -----EDYSVYDYEQDSD----------------------------------NSTTYRLS 732
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSR 277
V FLA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+ EG +E E+ LP +KF
Sbjct: 733 VIFLAIDVFFAIFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKA 792
Query: 278 IDGLEKV---NGVLHL 290
EK G+LH+
Sbjct: 793 FHSNEKNITGPGLLHM 808
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 107/184 (58%), Gaps = 27/184 (14%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
VL + E+P PLR+ I GYALQCL HV V +F+RR
Sbjct: 3 VLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRRR--------------------N 42
Query: 162 GDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
G+E+ SS+ K LES NT S +WW+ GF WI A G+ L+ SP+LYWL V FL
Sbjct: 43 GNEDRH------SSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFL 96
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
AFDV F+M C+G+AC+ A+ CC+P + I YA+ REGA+E++I LP+++F +
Sbjct: 97 AFDVFFMMFCIGMACIFFFALFCCIP-LAAIAYAMKIREGASEDDIRLLPRYRFCDASLV 155
Query: 282 EKVN 285
KV+
Sbjct: 156 RKVD 159
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 130 VFCVSLEFKRRR--RGEGVVFGDS-----VSGSSSTTVTGDEEERFHGENDSSVAKNLES 182
+ CV++E++ RR R D S SSS +++ R + S+AK+LES
Sbjct: 1 MVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLES 60
Query: 183 ANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAV 242
ANT SF+WWI+GFYWI+A GE +I +PQLYWLC+ FLAFDV FV+ CV +AC+IGIAV
Sbjct: 61 ANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAV 120
Query: 243 CCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPF 292
CCCLPCI+ ILYA++++EGA+E++I ++P++KF R D EK PF
Sbjct: 121 CCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPF 170
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 128/265 (48%), Gaps = 59/265 (22%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 613 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 668
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTV 160
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR
Sbjct: 669 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRR-------------------- 708
Query: 161 TGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
N + A++LES + Y I E + Y L V F
Sbjct: 709 -----------NSTRRARDLESYDH---------EDYNIEYDYEQDSDDNSTTYRLSVIF 748
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTE------------REGATEEEID 268
LA DV F + CV +ACL+GIA+CCCLPCI+ +LYA+ +EG +E E+
Sbjct: 749 LAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTNLETPFLAGFIQEGVSEAELG 808
Query: 269 RLPKFKFSRIDGLEKV---NGVLHL 290
LP +KF EK G+LH+
Sbjct: 809 VLPLYKFKAFHSNEKNITGPGLLHM 833
>gi|218191343|gb|EEC73770.1| hypothetical protein OsI_08445 [Oryza sativa Indica Group]
Length = 213
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 92/108 (85%)
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +A
Sbjct: 74 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 133
Query: 236 CLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
C+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R+D EK
Sbjct: 134 CIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRMDEPEK 181
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 92/108 (85%)
Query: 176 VAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+AK+LESANT SF+WWI+GFYW++A G+ L +PQLYWLC+ FLAFDV FV+ CV +A
Sbjct: 35 IAKHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALA 94
Query: 236 CLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
C+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++P++KF R+D EK
Sbjct: 95 CIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPRYKFRRMDEPEK 142
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 93/109 (85%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
S+AK+LESANT SF+WWI+GFYW++A GE L +PQLYWLC+ FLAFDV FV+ CV +
Sbjct: 8 SIAKHLESANTMFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVAL 67
Query: 235 ACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK 283
AC+IGIAVCCCLPCI+ ILYA++++EGA+E++I ++PK+KF +++ EK
Sbjct: 68 ACIIGIAVCCCLPCIIAILYAVSDQEGASEDDIRQIPKYKFRKMEEPEK 116
>gi|308081813|ref|NP_001182980.1| uncharacterized protein LOC100501295 [Zea mays]
gi|238008582|gb|ACR35326.1| unknown [Zea mays]
Length = 167
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 87/116 (75%), Gaps = 7/116 (6%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR RRLM REPSV VRETAAE LEERQ+ WAYS+P+IV+D+LWN+ FV
Sbjct: 43 LRGAA-RFIRRTGSRRLM-REPSVAVRETAAEHLEERQTDWAYSKPVIVVDMLWNVAFVA 100
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-----GEGVVF 148
+A AV+ S+ E P VPLR+ I GY LQCL H+ CV++E++RRRR G GV F
Sbjct: 101 IAAAVVAASLGEIPAVPLRVWIAGYVLQCLLHILCVTVEYRRRRRDADQEGVGVDF 156
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
Query: 187 LSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCL 246
+SFLWWI+GFYW+ + G+ L +P+LYWL V FLAFDV F + CV +AC IGIA+CCCL
Sbjct: 2 VSFLWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCL 61
Query: 247 PCILGILYALTEREGATEEEIDRLPKFKFS--RIDGLEKVNGVLHLP 291
PC++ ILYAL +EGA++ +I LP++++S DG + + + +P
Sbjct: 62 PCVIAILYALAGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIP 108
>gi|223972729|gb|ACN30552.1| unknown [Zea mays]
Length = 166
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
Query: 38 LRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVI 97
LRGAA R +RR +G R ++REPSV VRETAAE LEERQ+ WAYS+P++V+D+LWN+ FV
Sbjct: 43 LRGAA-RFIRR-TGSRSLMREPSVAVRETAAEHLEERQTDWAYSKPVVVVDMLWNVAFVA 100
Query: 98 VAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR---GEGV 146
+A AVL S+ E P VPLR+ I GY LQCL H+ CV++E++RRRR G GV
Sbjct: 101 IAAAVLAASLGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRRRTQEGAGV 152
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 77/95 (81%)
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILG 251
WI+GFYW++ G+ L SPQLYWLC+ FL FDV FV+ CV +AC+IGIAVCCCLPCI+
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 252 ILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
ILYA+T++EGA++E+ID+L KFKF R ++K+ G
Sbjct: 61 ILYAVTDQEGASKEDIDQLAKFKFRRDGDIDKLTG 95
>gi|224071764|ref|XP_002303570.1| predicted protein [Populus trichocarpa]
gi|222841002|gb|EEE78549.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 63/80 (78%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P+++LD++WN FV VA VL +S E P VPLRL
Sbjct: 72 EPSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVAVAAGVLVLSRKENPGVPLRL 131
Query: 118 RIVGYALQCLFHVFCVSLEF 137
I+GY LQC+ H+ CV +E+
Sbjct: 132 WILGYGLQCVLHMVCVCVEY 151
>gi|361066495|gb|AEW07559.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+I+LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
IVGYALQC+ H+ V+ E+ RR
Sbjct: 108 WIVGYALQCILHMSYVAYEYIRR 130
>gi|383156391|gb|AFG60447.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156392|gb|AFG60448.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156393|gb|AFG60449.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156394|gb|AFG60450.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156395|gb|AFG60451.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156396|gb|AFG60452.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156397|gb|AFG60453.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156398|gb|AFG60454.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156399|gb|AFG60455.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156400|gb|AFG60456.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156401|gb|AFG60457.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156402|gb|AFG60458.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156403|gb|AFG60459.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156404|gb|AFG60460.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156405|gb|AFG60461.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156406|gb|AFG60462.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156407|gb|AFG60463.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
gi|383156408|gb|AFG60464.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 67/83 (80%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+I+LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
IVGYALQC+ H+ V+ E+ RR
Sbjct: 108 WIVGYALQCILHMSYVAYEYIRR 130
>gi|361066493|gb|AEW07558.1| Pinus taeda anonymous locus 0_5075_01 genomic sequence
Length = 130
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 66/83 (79%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AA+QLEERQS WAYS+P+++LD+LWNL FV+V+ +L +++E+P PLR+
Sbjct: 48 EPSMLVRENAAQQLEERQSDWAYSKPVVILDILWNLSFVVVSVVILSSTLDERPTTPLRI 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR 140
I GYALQC+ H+ V+ E+ RR
Sbjct: 108 WIAGYALQCILHMIYVAYEYIRR 130
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDR 269
+P+LYWL V FLAFDV F + CV +AC IGIA+CCCLPC++ ILYAL +EGA++ +I
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAILYALAGQEGASDADIGF 61
Query: 270 LPKFKFS--RIDGLEKVNGVLHLP 291
LP++++S DG + + + +P
Sbjct: 62 LPRYRYSDPSEDGQKGTDEGVMIP 85
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 50/281 (17%)
Query: 3 MNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVR 62
MNPP E P + P + S RL R + +RR+ G R P
Sbjct: 55 MNPPQH--EERPSSSTQTPTNQTSSNRLNSR--------NSSFMRRSDGYSRRRRSPL-- 102
Query: 63 VRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGY 122
W I ++++ + +I + VL +S +E P PL +VGY
Sbjct: 103 -----------NSGLW------ISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGY 145
Query: 123 ALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHG---ENDSSVAKN 179
A C F + L ++ R R + + SV+ +S T RF G S + +
Sbjct: 146 ASGC-FATLPI-LYWRYRTRNQTI----SVNQASETAGAATRRSRFVGIFRMRFSGMVDH 199
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--L 237
+ A +W++VG WI G + S +P+LY LC+ FL F C+G A +
Sbjct: 200 FKMALDCFFAVWFVVGNVWIFG-GHSSPSDAPKLYRLCIVFLTFS------CIGYAMPFI 252
Query: 238 IGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
+ +CCCLPCI+ IL L++ GA E ID LP +KF
Sbjct: 253 LCATICCCLPCIISILGFREDLSQTRGAAPESIDALPTYKF 293
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + +I + VL +S +E P PL IVGYA C+ + + F+ R +G
Sbjct: 109 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 168
Query: 145 --------GVVFGDSVSG----SSSTTVTGDEEERFHG----ENDSSVAKNLESANTFLS 188
V F ++ G S S T T +EE+R N SV + +
Sbjct: 169 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 228
Query: 189 F----------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 229 YFKMALDCFFAVWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPF 281
Query: 237 LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI+ IL LT+ GAT E I+ LP +KF
Sbjct: 282 ILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKF 323
>gi|110743179|dbj|BAE99481.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 41 AAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAF 100
A A LL R +G R PS+ VRETAA LEER+ W YS+P++ D+LWN V+ +
Sbjct: 38 ALAVLLGRITGHR----APSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASA 93
Query: 101 AVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
+L ++ E+P P+R+ I Y LQCLFHV V E+ RR
Sbjct: 94 VMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRR 133
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + +I + VL +S +E P PL IVGYA C+ + + F+ R +G
Sbjct: 89 ISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGH 148
Query: 145 --------GVVFGDSVSG----SSSTTVTGDEEERFHG----ENDSSVAKNLESANTFLS 188
V F ++ G S S T T +EE+R N SV + +
Sbjct: 149 EQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVE 208
Query: 189 F----------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 209 YFKMALDCFFAVWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPF 261
Query: 237 LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI+ IL LT+ GAT E I+ LP +KF
Sbjct: 262 ILCATICCCLPCIISILGFREDLTQTRGATSESINALPTYKF 303
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++++ ++ + VL +S +EKP+ PL +VGYA C + + + RR
Sbjct: 112 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDG 171
Query: 145 GVVFGDSVSGSS--------------STTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
+ GSS S T + EE ++ + ++N LS L
Sbjct: 172 EQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVL 231
Query: 191 --------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
W++VG WI G + + +P LY LC+ FL F C+G A
Sbjct: 232 ADYYKMALDCFFAVWFVVGNVWIFG-GHSSFTAAPNLYRLCIVFLTFS------CIGYAM 284
Query: 237 --LIGIAVCCCLPCILGILYA--LTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI+ IL L++ GA+ E I+ LP +KF
Sbjct: 285 PFILCAMICCCLPCIISILGHGDLSQVRGASAESINALPTYKF 327
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++++ ++ + VL +S +EKP+ PL +VGYA C + + + RR
Sbjct: 92 ISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYLRRNHDG 151
Query: 145 GVVFGDSVSGSS--------------STTVTGDEEERFHGENDSSVAKNLESANTFLSFL 190
+ GSS S T + EE ++ + ++N LS L
Sbjct: 152 EQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGASNARLSVL 211
Query: 191 --------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
W++VG WI G + + +P LY LC+ FL F C+G A
Sbjct: 212 ADYYKMALDCFFAVWFVVGNVWIFG-GHSSFTAAPNLYRLCIVFLTFS------CIGYAM 264
Query: 237 --LIGIAVCCCLPCILGILYA--LTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI+ IL L++ GA+ E I+ LP +KF
Sbjct: 265 PFILCAMICCCLPCIISILGHGDLSQVRGASAESINALPTYKF 307
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 111/257 (43%), Gaps = 52/257 (20%)
Query: 59 PSVRVRETAAEQLEERQSYWAYSR-PI-----IVLDVLWNLVFVIVAFAVLGVSINEKPE 112
P + R +A+ L + Y + R P+ I ++++ + +I + VL +S NE P+
Sbjct: 81 PRLNSRNSAS--LRRGEGYGHHGRSPLNSGLWISVELVVTVSQIIASIVVLSLSRNENPQ 138
Query: 113 VPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG------------DSVSGSSSTTV 160
PL IVGYA C+ + + F+ R + D S +
Sbjct: 139 APLFAWIVGYASGCVATLPILYWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYNSIHVSH 198
Query: 161 TGDEEERFHGENDSSVAKNLESANTFLSFL-----------------WWIVGFYWITASG 203
DEE +G S ++N F S L W++VG WI G
Sbjct: 199 VSDEE---NGHATRSASRNTIMPGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIFG-G 254
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCI---LGILYALTE 258
T S +PQLY LC+ FL F C+G A ++ +CCCLPCI LGI ++
Sbjct: 255 HTSPSDAPQLYRLCIVFLTFS------CIGYAMPFILCATICCCLPCIISVLGIREDFSQ 308
Query: 259 REGATEEEIDRLPKFKF 275
GAT E I+ LP FKF
Sbjct: 309 NRGATVESINALPIFKF 325
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--R 142
I ++VL N+ ++ A VL +S E P+ PL ++GY + C + + + R
Sbjct: 90 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 149
Query: 143 GEG----VVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF--------- 189
GE + G S + S+ + + E R N +V N F F
Sbjct: 150 GENEPAHTLQGSSQNNSTEPSASASERRRNAARN--AVLANPRINALFDHFKMALDCFFA 207
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 208 VWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLP 260
Query: 248 CILGIL---YALTEREGATEEEIDRLPKFKF 275
CI+ ++ GAT E I+ LP +KF
Sbjct: 261 CIISVMGFREDTNNTRGATSESINSLPTYKF 291
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 42/226 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ L ++ + VL VS +E P PL IVGYA C+ + SL
Sbjct: 109 ISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSL 168
Query: 136 EFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLS------- 188
E + +G + +G S +V+ + E + S+ S N L+
Sbjct: 169 EQDSAQNHQGSAHINVPAGPFSLSVSRNSES---DDRRSATTSPRGSQNAVLNARLKVLV 225
Query: 189 -----------FLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC- 236
+W++VG WI G + +P LY LC+ FL F C+G A
Sbjct: 226 EYFKMALDCFFAVWFVVGNVWIFG-GHSSAEEAPNLYRLCIVFLTFS------CIGYAMP 278
Query: 237 -LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKFSRI 278
++ +CCCLPCI+ +L LT+ GAT E ID LP +KF I
Sbjct: 279 FILCATICCCLPCIISVLGYREDLTQTRGATTESIDALPTYKFKLI 324
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+I + VL +S NE P+ PL +VGYA C+ + + F+ R + S GS
Sbjct: 119 IIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWRFRNRNQSGQQDSHQSHQGS 178
Query: 156 SSTT------------VTGDEEERFHGE---NDSSVAKNLESA-NTFLSF---------- 189
S EE+ F E + + L S N +
Sbjct: 179 SQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLSSRLNGLMDHFKMALDCFFA 238
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P+LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 239 VWFVVGNVWIFG-GHSTPTDAPKLYKLCIVFLTFS------CIGYAMPFILCATICCCLP 291
Query: 248 CI---LGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVN 285
CI LG ++ GAT E I+ LP +KF ++ E VN
Sbjct: 292 CIISLLGFREDFSQTRGATTESINSLPIYKF-KLQKSESVN 331
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + +I + VL +S NE P+ PL IVGY C+ + + F+ R +
Sbjct: 111 ISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWIVGYGSGCVATLPILYWRFRNRNQSN 170
Query: 145 GVVFG------------DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFL-- 190
D S + DEE +G S ++N F S L
Sbjct: 171 EQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEE---NGHATQSASRNTIMPGAFTSRLNG 227
Query: 191 ---------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
W++VG WI G T S +PQLY LC+ FL F C+G A
Sbjct: 228 LVDHFKMALDCFFAVWFVVGNVWIFG-GHTSPSDAPQLYRLCIVFLTFS------CIGYA 280
Query: 236 C--LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI LGI ++ GAT E I+ LP FKF
Sbjct: 281 MPFILCATICCCLPCIISVLGIREDFSQNRGATVESINALPIFKF 325
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++L + +I A VL +S NEKP PL IVGYA C + + ++ R +
Sbjct: 109 ISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQAS 168
Query: 145 GV-------------VFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA-------- 183
V S S S G+E + S + SA
Sbjct: 169 EQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEY 228
Query: 184 -----NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC-- 236
+ F + +W++VG WI G + S +P LY LC+ FL F C+G A
Sbjct: 229 FKMGLDCFFA-VWFVVGNVWIFG-GHSSASEAPNLYRLCIVFLTFS------CIGYAMPF 280
Query: 237 LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
++ + +CCCLPCI+ IL L++ GAT E I+ LP +KF
Sbjct: 281 ILCVTICCCLPCIISILGFREDLSQTRGATSESINALPTYKF 322
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++V+ N ++ A VL VS E P+ PL ++GY + C H V+
Sbjct: 91 ISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTVGCFATLPHLYWRYIHRNIVN 150
Query: 135 LEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF----- 189
E + +G +S + + + + ER ++V N F F
Sbjct: 151 GEHESSHTPQGSAHNNSNEATHAASAS----ERRRNAARNAVLANPRINALFDHFKMALD 206
Query: 190 ----LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVC 243
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +C
Sbjct: 207 CFFAVWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMIC 259
Query: 244 CCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
CCLPCI+ I+ GA+ E I+ LP +KF
Sbjct: 260 CCLPCIISIMGFREDTNNTRGASSESINALPTYKF 294
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--R 142
I ++VL N+ ++ A VL +S E P+ PL ++GY + C + + + R
Sbjct: 34 ISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 93
Query: 143 GEG----VVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF--------- 189
GE + G S + S+ + + E R N +V N F F
Sbjct: 94 GENEPAHTLQGSSQNNSTEPSASASERRRNAARN--AVLANPRINALFDHFKMALDCFFA 151
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 152 VWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLP 204
Query: 248 CILGIL---YALTEREGATEEEIDRLPKFKF 275
CI+ ++ GAT E I+ LP +KF
Sbjct: 205 CIISVMGFREDTNNTRGATSESINSLPTYKF 235
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++V+ N+ ++ A VL +S E P+ PL ++GY + C H V+
Sbjct: 95 ISIEVIVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVN 154
Query: 135 LEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF----- 189
E ++ +G + S + + E R N +V N F F
Sbjct: 155 GENEQAHSLQGSSQSQNNSTEPTHAASASERRRTAARN--AVLANPRINALFDHFKMALD 212
Query: 190 ----LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVC 243
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +C
Sbjct: 213 CFFAVWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMIC 265
Query: 244 CCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
CCLPCI+ ++ GAT E I+ LP +KF
Sbjct: 266 CCLPCIISVMGFREDTNNTRGATSESINSLPTYKF 300
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 122/296 (41%), Gaps = 49/296 (16%)
Query: 12 TSPLLAH----SLPDHLIRSRRLLRR-PPPPLRGAAARLLRRASGRRLMLREPSVRVRET 66
TSP +H S D L SR PP P R + + S R+
Sbjct: 22 TSPSTSHQDDPSGLDELHHSRGPSNEVPPGPERSSGTNDASDSHNAS------SARIDRG 75
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC 126
+Q +W I ++++ NL ++ A AVL VS NE P PL ++GY + C
Sbjct: 76 HRQQNPLNSGFW------ISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFTWLLGYTIGC 129
Query: 127 ---LFHVFCVSLEFKRRRRGEGVVFGD------SVSGSSSTTVTGDEEERFHGENDSSVA 177
L H++ L R + + S + S + + E G N + V+
Sbjct: 130 IAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMSETNSYAAVSSPRTSEAVDGTNSTGVS 189
Query: 178 K-NLESANT-FLSF-------------LWWIVGFYWITASGETLISCSPQLYWLCVTFLA 222
+ NL A+ F + +W++VG WI S + +P LY +C+ FLA
Sbjct: 190 RMNLPLASPRFYAMVACFKLMLDCFFAVWFVVGNVWIFGSRSSAHD-APNLYRICIVFLA 248
Query: 223 FDVVFVMICVGVACLIGIAVCCCLPC---ILGILYALTEREGATEEEIDRLPKFKF 275
F I + ++ +CCCLPC ILG+ L GAT E I+ L +KF
Sbjct: 249 FG----FIVYALPFILCTMICCCLPCIISILGVHEDLDLNRGATTEAINTLVAYKF 300
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-- 142
I ++++ + +I + VL +S +E P PL IVGYA C+ + + ++ R +
Sbjct: 110 ISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRYRHRNQVT 169
Query: 143 ----------GEGVVFGDSVSGSSSTTVTGDEE---------ERFHGENDSSVAKNLESA 183
V GDS+S ++T + E G+N ++ L++
Sbjct: 170 EQEAAQPRQSSHFSVPGDSIS----ISITRNSEVVDRRSSSTSSRGGQNSGALNARLKTL 225
Query: 184 NTFLSF-------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
+ +W++VG WI G + + +P +Y LC+ FL F C+G A
Sbjct: 226 VEYFKMALDCFFAVWFVVGNVWIFG-GHSSATEAPNMYRLCIVFLTFS------CIGYAM 278
Query: 237 --LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI LG L + GAT E ID LP +KF
Sbjct: 279 PFILCATICCCLPCIISLLGFREDLGQTRGATSESIDALPTYKF 322
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I ++++ N+ +I A AVL VS NE P PL +VGY + C+ H C +
Sbjct: 88 ISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGCVATIPHLYWRYLHRNCQN 147
Query: 135 LEFKRRRRGE---GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN------------ 179
+E + +G + DS + SS + E + +N + V++N
Sbjct: 148 IEQEPTTQGSSQRNISESDSFAPISSARAS----EVGNEDNSTGVSRNNFPIASPRVYAL 203
Query: 180 ---LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
L+ A +W++VG WI G + + +P LY LC+ FL F I +
Sbjct: 204 IACLKLALDCFFAVWFVVGNVWIFG-GRSSVHDAPNLYRLCIVFLTFG----FIGYALPF 258
Query: 237 LIGIAVCCCLPCIL---GILYALTEREGATEEEIDRLPKFKFSRI-----DGLEKVNGVL 288
++ +CCCLPCI+ G L +GAT E ID L +K+ + D E GVL
Sbjct: 259 ILCTMICCCLPCIISMVGFHEDLDLNKGATTEVIDALVAYKYKSMRIRDGDVGEDNGGVL 318
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 46/229 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ L +I + VL VS E P PL IVGYA C+ + +L
Sbjct: 107 ISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWRYSHRNQAL 166
Query: 136 EFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA-NTFLSF----- 189
E + +G + +G S +V+ + E GE+ S + N L+
Sbjct: 167 EQDSAQNHQGSAHINVPAGPFSLSVSRNSE----GEDRRSATTSPRGGQNAVLNARYELK 222
Query: 190 ---------------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGV 234
+W++VG WI S + +P LY LC+ FL F C+G
Sbjct: 223 VLLEYFKMALDCFFAVWFVVGNVWIFGSHSSAEE-APNLYRLCIVFLTFS------CIGY 275
Query: 235 AC--LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKFSRI 278
A ++ +CCCLPCI+ IL LT+ GAT E ID LP KF I
Sbjct: 276 AMPFILCATICCCLPCIISILGFREDLTQTRGATPESIDALPTHKFKLI 324
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 35/219 (15%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVV----FGDSVSGSS-----STTVTGDEEERFHGENDSS----VAKNLE 181
+ + R V F S+S +S T T R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEGDGRQTNTTSSRVSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
+CCCLPCI+ IL LT+ GAT E I+ LP KF
Sbjct: 286 TTICCCLPCIISILGYREDLTQPRGATPESINALPTHKF 324
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVV----FGDSVSGSS-----STTVTGDEEERFHGENDSS----VAKNLE 181
+ + R V F S+S +S T T R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF----SRIDGLEK 283
+CCCLPCI+ IL LT+ GAT E I+ LP KF SR +G +
Sbjct: 286 TTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDN 336
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 71/296 (23%)
Query: 18 HSLPDHLIRSRRLLRRPPPPL-RGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQS 76
H + + S L P PP R ++R RR + R L
Sbjct: 51 HQGEEETVSSSTLTAHPAPPQQRPTSSRNARRTTSTRSPLN-----------------SG 93
Query: 77 YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLE 136
W I ++++ + ++ A V+ ++ +E PE PL ++GY C+ + +
Sbjct: 94 LW------ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTSGCIATLPILYWR 147
Query: 137 FKRRRRGEGVVF----------GDSVSGSSSTTV-----TGDEEERFHGENDSSVAKNLE 181
F+ RG G ++ S S+ T DEE + + S+ +N +
Sbjct: 148 FRTYSRGTGQDSSQRLSSSSQANNNPSESTPYTAVSVAQAADEE---NSTDMSAAPRNNQ 204
Query: 182 SANTFLSFL-----------------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFD 224
T + L W++VG WI G + S SP+LY LC+ FL F
Sbjct: 205 VGETLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFG-GHSSPSDSPKLYRLCIAFLTFS 263
Query: 225 VVFVMICVGVAC--LIGIAVCCCLPC---ILGILYALTEREGATEEEIDRLPKFKF 275
C+G A ++ +CCCLPC +LG ++ GAT E I+ LP ++F
Sbjct: 264 ------CIGYAMPFILCATICCCLPCLISVLGFRENFSQTRGATTEAINALPVYRF 313
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVS 134
I +++ + +I A VL +S +E P PL IVGYA C+ +H S
Sbjct: 113 ISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQAS 172
Query: 135 LEFKRRRRGEGVV----FGDSVSGSS-----STTVTGDEEERFHGENDSS----VAKNLE 181
+ + R V F S+S +S T T R+ G ++ + + +
Sbjct: 173 EQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKVIVEYFK 232
Query: 182 SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIG 239
A +W++VG WI G + + +P LY LC+ FL F C+G A ++
Sbjct: 233 MALDCFFAVWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILC 285
Query: 240 IAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF----SRIDG 280
+CCCLPCI+ IL LT+ GAT E I+ LP KF SR +G
Sbjct: 286 TTICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNG 333
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + ++ + VL +S +E P PL IVGYA C V + L + R
Sbjct: 64 ICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGC---VATLPLLYWRYYHNR 120
Query: 145 GVVFGDSVSGS-----------SSTTVTGDEEERFHGENDSSVAKNLESA---------- 183
GV +S S S +T G E+ S+ L +A
Sbjct: 121 GVREQESSQASPRSNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLLVEYFK 180
Query: 184 ---NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LI 238
+ F + +W++VG WI G + +P LY LCV FL F C+G A ++
Sbjct: 181 IAVDCFFA-IWFVVGNVWIFG-GHSSADQAPNLYRLCVVFLTFS------CIGYAMPFIL 232
Query: 239 GIAVCCCLPC---ILGILYALTEREGATEEEIDRLPKFKF 275
+CCCLPC ILG+ + + GA+ E I+ LP +KF
Sbjct: 233 CATICCCLPCIISILGVREDMAQTRGASSESINALPTYKF 272
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 74 RQSYWAYSRPI------IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
R S + + R I I +++ +V ++ A VL S +E P PL I+GY + C+
Sbjct: 250 RDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCI 309
Query: 128 FHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND-------------- 173
+ + R R + + T + E R +
Sbjct: 310 ASIPLICWRCAHRNRPSEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPR 369
Query: 174 -SSVAKNLESANTFLSFLWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMI 230
S +A + ++A +W++VG WI TL +P +Y LC+ FLA
Sbjct: 370 PSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALS------ 423
Query: 231 CVGVAC--LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
CVG A ++ A+CCC PC++ +L L GAT+E ID LP +KF
Sbjct: 424 CVGYAIPFVMCAAICCCFPCLISLLRLQEDLGHTRGATQELIDALPTYKF 473
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++ + VL +S NE P+ PL IVGYA C V + L F R + DS
Sbjct: 103 IVASIVVLSLSRNEHPQTPLFQWIVGYASGC---VATLPLLFWRYYNHNHLREQDSAQSR 159
Query: 156 SSTTVTGDEEERF------HGENDSSVAKNLESANTFLSF-------------------- 189
++ D F +G+ + A + S T +
Sbjct: 160 QTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQTSILMNRRMKILVEYFKISLDCFFA 219
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FLAF C+G A ++ +CCCLP
Sbjct: 220 VWFVVGNVWIFG-GRSSAAVAPNLYRLCIVFLAFS------CIGYAMPFILCSTICCCLP 272
Query: 248 CI---LGILYALTEREGATEEEIDRLPKF 273
CI LG+ L++ GAT E I+ LP +
Sbjct: 273 CIISILGVREDLSQNRGATSESINALPTY 301
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ + ++ A V+ ++ +E PE PL ++GY CL + + F+ R
Sbjct: 106 ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRAT 165
Query: 145 GVVFGD---SVSGSSSTT-------VTGDEEERFHGENDSSVAKNL-ESANTFLSFL--- 190
G S G+S +T +EE G + + + ES T L+ L
Sbjct: 166 GQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDH 225
Query: 191 -----------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--L 237
W++VG WI G + S SP+LY LC+ FL F C+G A +
Sbjct: 226 FKMAIDCFFAVWFVVGNVWIFG-GHSSPSDSPKLYRLCIAFLTFS------CIGYAMPFI 278
Query: 238 IGIAVCCCLPC---ILGILYALTEREGATEEEIDRLPKFKF 275
+ +CCCLPC +LG ++ GAT E I+ LP ++F
Sbjct: 279 LCATICCCLPCLISVLGFRENFSQTRGATAEAINALPVYRF 319
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 120/300 (40%), Gaps = 48/300 (16%)
Query: 11 ETSPLL---AHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
++ PLL A +P H + S R R +SG P+ +
Sbjct: 15 DSHPLLMEHAIGIPRHDVASTSTPHRDNNDGMDQLPRDSESSSGTTDASYSPNAPLARRD 74
Query: 68 AEQLEERQS----YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
+L +QS +W I +++ NL +I A VL VS NE P PL ++GY
Sbjct: 75 DNRLRRQQSLNSGFW------ISIELAVNLSQIIAAICVLSVSKNEHPHAPLFEWVIGYT 128
Query: 124 LQC---LFHVFCVSLEFKR----RRRGEGVVFGDSVSGSSSTTVTGDEEER--------- 167
+ C L H++ L+ + + + V +S SS T ++
Sbjct: 129 IGCIATLPHLYWRYLQRNQLATVQGSNQNYVPDNSFESSSFTGISPPPVSEAGVVTVSNG 188
Query: 168 -------FHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
+ A + + A +W++VG W+ G + +P LY LC+ F
Sbjct: 189 VLRNNVVITNPRAQAFADHFKMALDCFFAVWFVVGNVWVFG-GHSSAHDAPNLYRLCIAF 247
Query: 221 LAFDVVFVMICVGVAC--LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
L F C+G A ++ +CCCLPCI +G L E GAT + I+ L ++F
Sbjct: 248 LTFS------CIGYAMPFILCALICCCLPCIISLMGFREDLDENRGATSDAINALGTYRF 301
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 59/285 (20%)
Query: 22 DHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYS 81
D L R+ L+ P A L RR R VR +Q S W
Sbjct: 56 DRLPRNSENLQETTTPSNSQNAPLARRGDNR----------VRR---QQSPLNSSCW--- 99
Query: 82 RPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR 141
I ++++ + +I A +VL +S NE P PL ++GY + C+ + + + R
Sbjct: 100 ---ISVELIVTVSQIIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRYIHRN 156
Query: 142 R-------------GEGVVFGDSVSGSSSTTVTGDEEERFHGEN----DSSVAKN---LE 181
R + +S + SS++ ++ E G N ++++ +N
Sbjct: 157 RLTTGQESASQNFPPNSIPEANSFTESSASRIS--EAGHVTGTNGVSQNNTITRNPRVQA 214
Query: 182 SANTFLSFL------WWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
A+ F L W++VG WI G + +P LY LC+ FL F C+G A
Sbjct: 215 YADHFRMALDCFFAVWFVVGNVWIFG-GHSSSHDAPNLYRLCIAFLTFS------CIGYA 267
Query: 236 C--LIGIAVCCCLPCILGILY---ALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI+ ++ L + +GAT E I+ L +KF
Sbjct: 268 MPFILCALICCCLPCIISLMSFREDLNQNKGATAEAINALRTYKF 312
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 46/223 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I ++++ +L +I A VL VS NE P PL ++GY + C+ + + F R R
Sbjct: 88 ISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYTIGCVATLPHLYWRFLHRNRQN 147
Query: 145 GVVFGDSVSGSSSTTVTGDEEERF-----------HGE------NDSSVAKNLE------ 181
+ ST E + + HG N+ VA+
Sbjct: 148 --------TEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRVYAL 199
Query: 182 ------SANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVA 235
+ + F + +W++VG WI G T + +P LY LC+ FLAF I +
Sbjct: 200 VACFKLALDCFFA-VWFVVGNVWIFG-GRTSLHDAPNLYRLCIVFLAFG----FIGYALP 253
Query: 236 CLIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
++ +CCCLPCI +GI L GAT E ID L +KF
Sbjct: 254 FILCTMICCCLPCIISMMGIHEDLDFNRGATAEAIDALVAYKF 296
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + ++ + VL +S +EKP+ PL + + GYA CL + L + R
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCL---ATLPLLYWRYTHRN 135
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANT------------------- 185
G S S + E S VA N+ SA+T
Sbjct: 136 GTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVEKFKIA 195
Query: 186 ---FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGI 240
F + +W++VG WI G + +P LY LC+ FL F C+G A ++
Sbjct: 196 LDCFFA-VWFVVGNVWIFG-GHSSSREAPNLYRLCIVFLTFS------CIGYAMPFILCA 247
Query: 241 AVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
+CCCLPCI LG + GA+ E I LP +KF E +G
Sbjct: 248 TICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPSSESKDG 296
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 120/300 (40%), Gaps = 48/300 (16%)
Query: 11 ETSPLLAH---SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETA 67
++ PLL +P + S RR R +SG P+ +
Sbjct: 15 DSHPLLMEHVIGIPRDDVASTSTPRRDNNDGMDHLPRDSESSSGTTAAYNSPNTPIARRD 74
Query: 68 AEQLEERQS----YWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYA 123
+ +QS +W I +++ NL +I A VL VS NE P PL ++GY
Sbjct: 75 DNRRRRQQSLNSGFW------ISIELAVNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYT 128
Query: 124 LQC---LFHVFCVSLEFKR----RRRGEGVVFGDSVSGSSSTTVTGDEEER------FHG 170
+ C L H++ L+ + + + V +S +S T ++ +G
Sbjct: 129 IGCIATLPHLYWRYLQRNQLPTVQGSNQNYVPDNSFESNSFTGISPPHVSEAGVVTVTNG 188
Query: 171 ENDSSVAKNLESANTFLSF----------LWWIVGFYWITASGETLISCSPQLYWLCVTF 220
+ ++ A F +W++VG W+ G + +P LY LC+ F
Sbjct: 189 VSRNNTVTTNPRAQAFADHFKMALDCFFAVWFVVGNVWVFG-GHSSSHDAPNLYRLCIAF 247
Query: 221 LAFDVVFVMICVGVAC--LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
L F C+G A ++ +CCCLPCI +G L E GAT + I+ L +KF
Sbjct: 248 LTFS------CIGYAMPFILCALICCCLPCIISLMGFREDLNENRGATSDAINALGTYKF 301
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 47/279 (16%)
Query: 48 RASGRRLMLREPSVRVRETAAEQL-----------EERQSYWAYSRPIIVLDVLWNLVFV 96
R SG R+ L +PSV + R +S I ++++ L +
Sbjct: 67 RISGARMPLSQPSVSATSVSNGSNSRNSSFIRRGDTRRNRSPVHSGLWISIELVLLLSQI 126
Query: 97 IVAFAVLGVSINEKPEVPLRLRIVGYALQC-----------LFHVFCVSLEFKRRRRGEG 145
+ + VL +S +E P PL I+GYA C H E + R+
Sbjct: 127 VASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRYYHHNHMQEQESSQSRQTSP 186
Query: 146 VVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNL---ESANTFLSF----------LWW 192
+ S + S+ G E+ + + S +L T + + +W+
Sbjct: 187 RINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRMKTLVEYFKISLDCFFAVWF 246
Query: 193 IVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCI- 249
+VG WI G + + +P LY LC+ FLAF C+G A + +CCCLPCI
Sbjct: 247 VVGNVWIFG-GHSSANEAPNLYRLCIVFLAFS------CIGYAMPFIFCSTICCCLPCII 299
Query: 250 --LGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
LG+ +++ GAT E I+ LP +KF NG
Sbjct: 300 SILGVREDMSQNRGATSESINALPIYKFKMKKNKRNGNG 338
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 34/230 (14%)
Query: 74 RQSYWAYSRPI------IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
R S + + R I I +++ +V ++ A VL S +E P PL I+GY + C+
Sbjct: 74 RDSMYGHGRSIWNSGLWISFELVIYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCI 133
Query: 128 FHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGEND-------------- 173
+ + R R + + T + E R +
Sbjct: 134 ASIPLICWRCAHRNRPSEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPR 193
Query: 174 -SSVAKNLESANTFLSFLWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMI 230
S +A + ++A +W++VG WI TL +P +Y LC+ FLA
Sbjct: 194 PSILAYHFKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALS------ 247
Query: 231 CVGVAC--LIGIAVCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
CVG A ++ A+CCC PC++ +L L GAT+E ID LP +KF
Sbjct: 248 CVGYAIPFVMCAAICCCFPCLISLLRLQEDLGHTRGATQELIDALPTYKF 297
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 42/217 (19%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC---LFHVFCVSLEFKRRR 141
I ++++ N+ +I A VL VS NE P PL ++GY + C L H++ L
Sbjct: 99 ISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRYLHRNLPT 158
Query: 142 RGE------------------GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESA 183
G+ GV + VS ++ TV RF + A + + A
Sbjct: 159 TGQEPTVQNIPPNNTPEANSYGVTGTNGVSRNNEATVN----PRFQ-----AFADHFKMA 209
Query: 184 NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIA 241
+W++VG W+ G + +P LY LC+ FL F C+G A ++
Sbjct: 210 LDCFFAVWFVVGNVWVFG-GHSSAHDAPNLYRLCIAFLTFS------CIGYAMPFILCAL 262
Query: 242 VCCCLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
+CCCLPCI+ IL L + GA+ E I+ L KF
Sbjct: 263 ICCCLPCIISILGFREDLNQNRGASAETINALGTCKF 299
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEG 145
+I + VL +S NE P+ PL + + GYA CL H + + E E
Sbjct: 24 IIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRTREPASTSASEP 83
Query: 146 VVFGDSVSGSSSTTVT-GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASG 203
V GSS T+T G ++ HG S V + + A +W++VG WI G
Sbjct: 84 NPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFG-G 142
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGILYALTERE- 260
+ +P LY LC+ L F C+G A ++ +CCCLPCI+ +L ++
Sbjct: 143 HSAAHDAPNLYRLCIVLLTFS------CIGYAMPFILCATICCCLPCIIALLGFREDQNQ 196
Query: 261 --GATEEEIDRLPKFKF-SRIDGLEKVN 285
GA++E I LP +KF ++ K+N
Sbjct: 197 PRGASQEAIAALPTYKFKAKASNESKLN 224
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 25/216 (11%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S ++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R
Sbjct: 86 SNTWMILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRP 145
Query: 141 RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWI 199
+G F ++ E++R + E+ SS N + L F +W+++G W+
Sbjct: 146 YSAQGDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWV 195
Query: 200 TASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL-- 256
S +P+L+ LC+T LA++ I L+ + +CCC+P + +L Y +
Sbjct: 196 FDSRFGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLLGYNMNM 251
Query: 257 -TEREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLP 291
+ +GA++++I RLP ++F ++ N L LP
Sbjct: 252 GSVDKGASDDQISRLPSWRF------KEANANLDLP 281
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R +
Sbjct: 90 MILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQ 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASG 203
G F ++ E++R + E+ SS N + L F +W+++G W+ S
Sbjct: 150 GDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 199
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TER 259
+P+L+ LC+T LA++ I L+ + +CCC+P + +L Y + +
Sbjct: 200 FGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVD 255
Query: 260 EGATEEEIDRLPKFKFSRIDGLEKVNGVLHLP 291
+GA++++I RLP ++F ++ N L LP
Sbjct: 256 KGASDDQISRLPSWRF------KEANANLDLP 281
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEG 145
+I + VL +S NE P+ PL + + GYA CL H + + E E
Sbjct: 24 IIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWRYTHQYMRTREPASTSASEP 83
Query: 146 VVFGDSVSGSSSTTVT-GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASG 203
V GSS T+T G ++ HG S V + + A +W++VG WI G
Sbjct: 84 NPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIALDCFFAIWFVVGNVWIFG-G 142
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGILYALTERE- 260
+ +P LY LC+ L F C+G A ++ +CCCLPCI+ +L ++
Sbjct: 143 HSAAHDAPNLYRLCIVLLTFS------CIGYAMPFILCATICCCLPCIIALLGFREDQNQ 196
Query: 261 --GATEEEIDRLPKFKF-SRIDGLEKVN 285
GA++E I LP +KF ++ K+N
Sbjct: 197 PRGASQEAIAALPTYKFKAKASNESKLN 224
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +V+ + V+ A +L S +E P PL I+GY + C+ + + + R R
Sbjct: 91 ISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIYWRYVHRNRHL 150
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + T + E R H + S +A + ++A
Sbjct: 151 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGCIAISCPRLSVLAYHFKTAVDCFFA 210
Query: 190 LWWIVGFYWITASGETLIS---CSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCC 244
+W++VG WI G ++ S +P +Y LC+ FLA + CVG A ++ A+CC
Sbjct: 211 VWFVVGNVWIFG-GRSISSDAQDAPNMYRLCLAFLA------LSCVGYAIPFIMCAAICC 263
Query: 245 CLPCILGIL---YALTEREGATEEEIDRLPKFKF 275
C PC++ +L L + GAT+E ID LP +KF
Sbjct: 264 CFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 297
>gi|147742777|gb|ABQ50557.1| hypothetical protein [Brassica rapa]
Length = 140
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 44/54 (81%)
Query: 233 GVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
+AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF ++ + K G
Sbjct: 58 ALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKVGRVNKHAG 111
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + +V + V L VS E+P P+R+ IVGY C+ + + ++R +
Sbjct: 59 MILEFIALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQ 118
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASG 203
G F ++ E++R + E+ SS N + L F +W+++G W+ S
Sbjct: 119 GDGF----------SLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 168
Query: 204 ETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TER 259
+P+L+ LC+T LA++ I L+ + +CCC+P + +L Y + +
Sbjct: 169 FGSFHRAPKLHVLCITLLAWNA----ISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVD 224
Query: 260 EGATEEEIDRLPKFKFSRIDGLEKVNGVLHLP 291
+GA++++I RLP ++F ++ N L LP
Sbjct: 225 KGASDDQISRLPSWRF------KEANANLDLP 250
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 30/214 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + T + E R H + S +A + ++
Sbjct: 150 DQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFFA 209
Query: 190 LWWIVGFYWITASGETLISCS---PQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCC 244
+W++VG WI G ++ S + P +Y LC+ FLA CVG A ++ A+CC
Sbjct: 210 VWFVVGNVWIFG-GRSISSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICC 262
Query: 245 CLPCILGILY---ALTEREGATEEEIDRLPKFKF 275
C PC++ +L L + GAT+E ID LP +KF
Sbjct: 263 CFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 296
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNRHL 149
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGEND---------------SSVAKNLESANTFLSF 189
+ + + E R H + S +A + ++
Sbjct: 150 DQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGVDCFFA 209
Query: 190 LWWIVGFYWITASGETLISCS---PQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCC 244
+W++VG WI G ++ S + P +Y LC+ FLA CVG A ++ A+CC
Sbjct: 210 VWFVVGNVWIFG-GRSISSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICC 262
Query: 245 CLPCILGILY---ALTEREGATEEEIDRLPKFKF 275
C PC++ +L L + GAT+E ID LP +KF
Sbjct: 263 CFPCLISVLRLQEDLGQNRGATQELIDALPTYKF 296
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 40/241 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRG- 143
I +++ + L +I + VL +S +E P+ PL +VGY C+ + + F R RG
Sbjct: 107 ISIELAFTLTQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFIHRNRGS 166
Query: 144 EGVV-------FGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLE--SANTFLSFLW--- 191
E VV +S S +S H + S + + E +ANT + +
Sbjct: 167 EAVVQVNQASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTRMGLIMDHF 226
Query: 192 -----------WIVGFYWITASGETLISCSPQLY---------WLCVTFLAFDVVFVMI- 230
++VG WI G +S +P LY L ++F + +V++ +
Sbjct: 227 KTALDCFFGVLFVVGNVWIFG-GHASVSDAPNLYRYFLNPDVKTLQISFESLCIVYLTLS 285
Query: 231 CVGVAC--LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVN 285
C+ A ++ +CCCLPCI LGI L + GA+EE I+ LP +KF +
Sbjct: 286 CINYAMPFILCAMICCCLPCIISVLGIREDLNQVRGASEESINTLPTYKFKVTNDENGCT 345
Query: 286 G 286
G
Sbjct: 346 G 346
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 49/240 (20%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + ++ + VL +S +EKP+ PL + + GYA CL + + + R
Sbjct: 79 ISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWRYTHRN--- 135
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANT------------------- 185
G S S + E S VA N+ SA+T
Sbjct: 136 GTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDVDSASD 195
Query: 186 --------------FLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMIC 231
F + +W++VG WI G + +P LY LC+ FL F C
Sbjct: 196 NSGLVEKFKIALDCFFA-VWFVVGNVWIFG-GHSSSREAPNLYRLCIVFLTFS------C 247
Query: 232 VGVAC--LIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNG 286
+G A ++ +CCCLPCI LG + GA+ E I LP +KF E +G
Sbjct: 248 IGYAMPFILCATICCCLPCIIALLGFREEQAQNRGASAEVIAALPTYKFKSRPSSESKDG 307
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL---------FHVFCVSL 135
I ++++ + ++ + VL +S +E P PL IVG+A C+ ++ C+
Sbjct: 66 ICVELVITVSQIVASVVVLSLSKHEHPRAPLFAWIVGFASGCVATLPLLYWRYYHNCLVR 125
Query: 136 EFKRRRRGEGVVFGDSVSG---SSSTTVTGDEEERFHGENDSSVAKNLE----------S 182
E + + + + SG S STT G++ N S N +
Sbjct: 126 ELESSSQAS--LRSNDPSGTLLSDSTTNGGEDVPASSRSNQESWLMNARLKLLVEYFKIA 183
Query: 183 ANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGI 240
+ F + +W+IVG WI G + +P LY LCV FL F C+G A ++
Sbjct: 184 VDCFFA-IWFIVGNVWIFG-GHSSADQAPNLYRLCVVFLTFS------CIGYAMPFILCA 235
Query: 241 AVCCCLPC---ILGILYALTEREGATEEEIDRLPKF 273
+CCCLPC ILG+ + + GA+ E I+ LP +
Sbjct: 236 TICCCLPCIISILGVREDMAQTPGASSESINSLPTY 271
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I + + + + A +L +S +E P PL I+GY + C + V + R R
Sbjct: 90 ISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYTVGCTASLPLVYWRYVHRNRPS 149
Query: 145 GVVFGDSVSGSSSTTVTGDE--EERFHGE------------NDSSVAKNLESANTFLSFL 190
+ + T + E +R G S +A + ++A +
Sbjct: 150 EEEPEQPPTTYPTLTSSSSEGRNQRTSGSVLHLGCITIACPRPSILAYHSKTAVDCFFAI 209
Query: 191 WWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCL 246
W++VG WI T +P +Y LC+ FLA CVG A ++ A+CCC
Sbjct: 210 WFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICCCF 263
Query: 247 PCILGILY---ALTEREGATEEEIDRLPKFKF 275
PC++ +L L + GAT+E ID LP +KF
Sbjct: 264 PCLISVLRLQEDLGQSRGATQELIDALPTYKF 295
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR-- 142
I ++++ + +I A VL +S E P PL ++GY + C+ + + + R R
Sbjct: 100 ISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRYLHRNRPT 159
Query: 143 -----GEGVVFGDSVSGSSSTTVT---GDEEERFHGENDSSVAKNLESANTFLSF----- 189
+S+ S+S T + G E F E + N+ + N
Sbjct: 160 TGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRAQVYADHF 219
Query: 190 ---------LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LI 238
+W++VG W+ G + +P LY LC+ FL F C+G A ++
Sbjct: 220 RMALDCFFAVWFVVGNVWVFG-GHSSAHDAPNLYRLCIAFLTFS------CIGYAMPFIL 272
Query: 239 GIAVCCCLPCILGILY---ALTEREGATEEEIDRLPKFKF 275
+CCCLPCI+ ++ L + +GA+ E I+ L +KF
Sbjct: 273 CALICCCLPCIISLMSFREDLNQNKGASAEAINALRTYKF 312
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFG------ 149
++ + VL +S +E P PL I+GYA C + + +
Sbjct: 127 IVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWRYYHHNHMREQDSSQSRQSS 186
Query: 150 ---DSVSGS---SSTTVTGDEEERFHGENDSSVAKNLES--ANTFLSF----------LW 191
+ SG+ SS T +G++ + + S+ A L + T + + +W
Sbjct: 187 PRINDPSGTLLFSSRTNSGEDGQAAVASSRSNQASLLMNRRMKTLVEYFKISLDCFFAVW 246
Query: 192 WIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPC- 248
++VG WI G + + +P LY LC+ FLAF C+G A ++ +CCCLPC
Sbjct: 247 FVVGNVWIFG-GHSSVEEAPNLYRLCIVFLAFS------CIGYAMPFILCSTICCCLPCI 299
Query: 249 --ILGILYALTEREGATEEEIDRLPKFKF 275
ILG+ +++ GA E I+ LP +KF
Sbjct: 300 ISILGVREDMSQNRGAASESINALPIYKF 328
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + S +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 355 VWFVVGNVWIFG-GHSSSSEAPNLYRLCIVFLTFS------CIGYAMPFILCATICCCLP 407
Query: 248 CILGIL---YALTEREGATEEEIDRLPKFKF 275
CI+ IL LT+ GAT E I+ LP +KF
Sbjct: 408 CIISILGFREDLTQTRGATSESINALPTYKF 438
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + ++ + + L +S E+P P+R+ + GY + C+ ++ L R R
Sbjct: 86 MMLEFIALILQITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNL----LLLYGRYRQI 141
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
+ GDS+S S +EE R S + ++ +W+++G W+ S
Sbjct: 142 YLTQGDSLSLSDIEQQRNNEETRM-----SHLMNKCRTSLELFFAIWFVMGNVWVFDSRF 196
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TERE 260
+P+L+ LC+ LA++ +C L+ + +CCC+P I +L Y + + +
Sbjct: 197 GSFHHAPKLHVLCIILLAWNA----MCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNK 252
Query: 261 GATEEEIDRLPKFK 274
GA+ ++I +LP ++
Sbjct: 253 GASNDQISQLPSWR 266
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 51/297 (17%)
Query: 10 AETSPLLAHSLPDHLIRSRRLLRR-PPPPLRGAAARLLRRASGRRLMLREPSVRVRETAA 68
A TS HS D L RSR P P + + + S R+
Sbjct: 24 ASTSHQDDHSGSDELHRSRGPSNEVSPSPDTSSGTNDVSNSHNAS------SARIDRGHR 77
Query: 69 EQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQC-- 126
+Q +W I ++++ NL ++ A VL VS NE P+ PL ++GY + C
Sbjct: 78 QQNPLNSGFW------ISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLGYTIGCIA 131
Query: 127 -LFHVFCVSLEFKR--------RRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVA 177
L H++ L R +R G+ S S + + E G N + V+
Sbjct: 132 ILPHLYWRYLHRNRLDMEQEMPPQRSPGMNI--SEINSYAVVSSPHASEAVEGANSTGVS 189
Query: 178 K-NLESA---------------NTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
+ NL A + F + +W++VG W+ S + +P LY +C+ FL
Sbjct: 190 RTNLPMASPRFYAMVACFKLVLDCFFA-VWFVVGNVWMFGSRSSAHD-APNLYRICLVFL 247
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCI---LGILYALTEREGATEEEIDRLPKFKF 275
AF I + ++ +CCCLPCI LG+ L GAT E I+ L +KF
Sbjct: 248 AFG----FIGYALPFILCTMICCCLPCIISVLGVHEDLDMNRGATTEAINTLVAYKF 300
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGD 150
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G G V GD
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDVYQGNGFVLGD 159
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASGETLISC 209
++++R E SS N + L F +W+++G W+ S
Sbjct: 160 V-----------EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEE 265
+P+L+ LCV+ L+++ IC L+ + +CC +P I +L Y + + A+++
Sbjct: 209 APKLHVLCVSLLSWNA----ICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDD 264
Query: 266 EIDRLPKFKFSRID 279
+I LP +KF RID
Sbjct: 265 QISSLPSWKFKRID 278
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 22/193 (11%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G F
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGF---- 155
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF---LWWIVGFYWITASGETLISC 209
V GD E++ G ++ + + T L +W+++G W+ S
Sbjct: 156 -------VLGDVEQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEE 265
+P+L+ LCV+ LA++ IC L+ + +CC +P I +L Y + + A+++
Sbjct: 209 APKLHVLCVSLLAWNA----ICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDD 264
Query: 266 EIDRLPKFKFSRI 278
+I LP +KF RI
Sbjct: 265 QISSLPSWKFKRI 277
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR--RRGEGVVFGD 150
LV + V L +S E+P P+RL I GY + CL ++ + +++ +G G V GD
Sbjct: 100 LVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGD 159
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF-LWWIVGFYWITASGETLISC 209
++++R E SS N + L F +W+++G W+ S
Sbjct: 160 V-----------EQQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHH 208
Query: 210 SPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEE 265
+P+L+ LCV+ LA++ IC L+ + +CC +P I +L Y + + A+++
Sbjct: 209 APKLHVLCVSLLAWNA----ICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDD 264
Query: 266 EIDRLPKFKFSRI 278
+I LP +KF RI
Sbjct: 265 QISSLPSWKFKRI 277
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 234 VACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFS 276
+AC IGIA+CCCLPC++ ILYAL +EGA++ +I LP++++S
Sbjct: 1 MACFIGIALCCCLPCVIAILYALAGQEGASDADIGFLPRYRYS 43
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
I +++ + V+ A +L S +E P PL I+GY L C+ + + + R R
Sbjct: 90 ISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVHRNR-- 147
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
+ + ++ + +++ E N S + +G I+
Sbjct: 148 --------------HLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPSI 193
Query: 205 TLISC-SPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGILY---ALTE 258
+ + +P +Y LC+ FLA CVG A ++ A+CCC PC++ +L L +
Sbjct: 194 SSDAQDAPNMYRLCLAFLALS------CVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQ 247
Query: 259 REGATEEEIDRLPKFKF 275
GAT+E ID LP +KF
Sbjct: 248 NRGATQELIDALPTYKF 264
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 9 VWFVVGNVWIFG-GRSSAADAPNLYRLCIVFLTFS------CIGYAMPFILCAMICCCLP 61
Query: 248 CILGIL---YALTEREGATEEEIDRLPKFKF 275
CI+ ++ GAT E I+ LP +KF
Sbjct: 62 CIISVMGFREDTNNTRGATSESINSLPTYKF 92
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
L +I++ L +S EKP P+RL I GY L C V + L + R R +
Sbjct: 67 LFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGC---VLSLLLLYGRHRYH----YLMQR 119
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQ 212
G+S + + +++ S + ++ +W+++G W S +P+
Sbjct: 120 DGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPK 179
Query: 213 LYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGI----LYALTEREGATEEEID 268
L+ LC +F +V+ IC ++ + +CCC+P I + + + +GA++++I
Sbjct: 180 LHLLC----SFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQIS 235
Query: 269 RLPKFKFSRIDG 280
+LP +++ ++
Sbjct: 236 QLPCWRYKAVEA 247
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSV 152
L +I++ L +S EKP P+RL I GY L C V + L + R R +
Sbjct: 51 LFQLIISAFTLAISQAEKPVWPMRLWIGGYDLGC---VLSLLLLYGRHRYH----YLMQR 103
Query: 153 SGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQ 212
G+S + + +++ S + ++ +W+++G W S +P+
Sbjct: 104 DGNSLSDIEHEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPK 163
Query: 213 LYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGI----LYALTEREGATEEEID 268
L+ LC +F +V+ IC ++ + +CCC+P I + + + +GA++++I
Sbjct: 164 LHLLC----SFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQIS 219
Query: 269 RLPKFKFSRIDG 280
+LP +++ ++
Sbjct: 220 QLPCWRYKAVEA 231
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE 144
++L+ + LV + + L +S EKP P+R+ IVGY + CL + V +++ +
Sbjct: 70 MMLEFIALLVQISMTTFTLVISKMEKPIWPMRIWIVGYDIGCLLSLLLVYGRYRQVHVVQ 129
Query: 145 GVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSF---LWWIVGFYWITA 201
G FG ++ E++R G DS + T L +W+++G W+
Sbjct: 130 GDSFG----------LSDLEQQR--GSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVFD 177
Query: 202 SGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERE- 260
S + +P+L+ LC++ LA++ + + L+ + +LG + E
Sbjct: 178 SRFGSFNRAPKLHVLCISLLAWNALSYSF-PFLLFLLLCCCVPLISSVLGYNMQMGSAER 236
Query: 261 GATEEEIDRLPKFKFSRIDGLEKV 284
GA++++I RLP +K+ +D +V
Sbjct: 237 GASDDQISRLPSWKYKAVDTNSEV 260
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 190 LWWIVGFYWITASGETLISC--SPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCC 245
+W++VG WI T +P +Y LC+ FLA CVG A ++ A+CCC
Sbjct: 113 VWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALS------CVGYAVPFIMCAAICCC 166
Query: 246 LPCILGILY---ALTEREGATEEEIDRLPKFKF 275
PC++ +L L + GAT+E I+ LP +KF
Sbjct: 167 FPCLISVLRLQEDLGQTRGATQELIEALPTYKF 199
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++V AV+ S E+P PLR+ + Y + +V + L + R R S SG+
Sbjct: 71 MVVTTAVVATSPKERPAWPLRVWVAAYNVG---NVLSLPLLYWRHRH--------SSSGA 119
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
T++ D E HG ND ++ + A FL +W+++G W+ + +
Sbjct: 120 RGGTLSDDPE--MHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 177
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LC+ LA++ V + + L+ V + + + + GA++E++ L
Sbjct: 178 PRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAAL 237
Query: 271 PKFKF 275
P+++F
Sbjct: 238 PQWRF 242
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
++V AV+ S E+P PLR+ + Y + +V + L + R R S SG+
Sbjct: 71 MVVTTAVVATSPKERPAWPLRVWVAAYNVG---NVLSLPLLYWRHRH--------SSSGA 119
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
T++ D E HG ND ++ + A FL +W+++G W+ + +
Sbjct: 120 RGGTLSDDPE--MHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 177
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LC+ LA++ V + + L+ V + + + + GA++E++ L
Sbjct: 178 PRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAAL 237
Query: 271 PKFKF 275
P+++F
Sbjct: 238 PQWRF 242
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE--GVVFGD 150
L+ + V + L +S NE+P P+RL I GY + CL ++ + ++++ FGD
Sbjct: 225 LLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGD 284
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCS 210
+ + R S + ++ +W+++G W+ S +
Sbjct: 285 ---------IEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 335
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEEE 266
P L+ LC++ LA++ +C L+ + +CC +P + L Y + + +GA++++
Sbjct: 336 PILHVLCISLLAWNA----LCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQ 391
Query: 267 IDRLPKFKFSRIDGLEKVNGVLHLPFC 293
I LP +K+ ID + + P C
Sbjct: 392 ISSLPSWKYKLIDETSDSSQANNDPEC 418
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGE--GVVFGD 150
L+ + V + L +S NE+P P+RL I GY + CL ++ + ++++ FGD
Sbjct: 96 LLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGD 155
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCS 210
+ + R S + ++ +W+++G W+ S +
Sbjct: 156 ---------IEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 206
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEEE 266
P L+ LC++ LA++ +C L+ + +CC +P + L Y + + +GA++++
Sbjct: 207 PILHVLCISLLAWNA----LCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQ 262
Query: 267 IDRLPKFKFSRIDGLEKVNGVLHLPFC 293
I LP +K+ ID + + P C
Sbjct: 263 ISSLPSWKYKLIDETSDSSQANNDPEC 289
>gi|413947493|gb|AFW80142.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 459
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 46 LRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGV 105
L R SGRR PS+ V E AA QL+ R+ WA+SRP++ LD+ WN+ F A A+L
Sbjct: 106 LPRTSGRR----GPSMLVHEMAALQLQRRRVDWAHSRPVLALDIAWNVAFTAAAAAMLSS 161
Query: 106 SINEKPEVPLRL 117
S E P PL L
Sbjct: 162 SAEESPIKPLHL 173
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 67 AAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
AA QL+ R+ WA+SRP++ LD+ WN+ F A A+L S E P PL L
Sbjct: 2 AALQLQRRRVDWAHSRPVLALDIAWNVAFAATAAAMLSSSAEESPIKPLHL 52
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCL----------FHVFCVSLEFKRRRRGEGVVFGDS 151
VL +S EKP P+RL IVGY L C+ +H++ + GE V D
Sbjct: 108 VLAISEAEKPIWPMRLWIVGYDLGCILSLLLLYGRYWHLYLM--------HGERVGLSD- 158
Query: 152 VSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSP 211
+ T H N + L A +W+++G WI S + +P
Sbjct: 159 ----TEQRRTSQASRSLHLMNKCRTSLELFFA------IWFVMGNVWIVDSRFSSFQRAP 208
Query: 212 QLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEEEI 267
+L+ LCV L ++ IC ++ + +CCC+P + +L Y + + + A +++I
Sbjct: 209 KLHLLCVFLLVWNA----ICYSFPFILFLLLCCCVPLVSSLLGYNISMASTDKAALDDQI 264
Query: 268 DRLPKFKF 275
+LP +++
Sbjct: 265 SQLPCWRY 272
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 93 LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR--RGEGVVFGD 150
LV + V + L +S E+P P+RL I GY + CL ++ + ++++ +G FGD
Sbjct: 96 LVQITVITSTLALSKKERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGD 155
Query: 151 SVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCS 210
+ + R S + ++ +W+++G W+ S +
Sbjct: 156 ---------IELQQRSREETTRCSHLMNRCRTSLELFFAIWFVIGNVWVFDSRFGSFHYA 206
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P L+ LC++ LA++ + + L+ V + + + +GA++++I L
Sbjct: 207 PILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLLSSFLGYNMNVGSSEKGASDDQISSL 266
Query: 271 PKFKFSRIDGLEKVNGVLHLPFC 293
P +K+ ID + P C
Sbjct: 267 PSWKYKLIDEASDSAQASNDPEC 289
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 19/178 (10%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
L +S EKP P+R+ I GY + C+ ++ V R R ++ GD++S ++
Sbjct: 100 TLVISKREKPVWPMRIWISGYDIGCVLNLLTV----YGRYRQIYLIQGDALS------LS 149
Query: 162 GDEEERFHGEND-SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTF 220
E++R GE S + ++ F +W+++G W+ S +P+L+ LC+T
Sbjct: 150 DIEQQRNSGETRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITL 209
Query: 221 LAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEEEIDRLPKFK 274
L ++ IC L+ + +CCC+P I +L Y + + +GA++E+I +LP ++
Sbjct: 210 LTWNA----ICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWR 263
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 22/181 (12%)
Query: 102 VLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVT 161
L +S EKP P+R+ I GY + C+ ++ V R R ++ GD++S ++
Sbjct: 100 TLVISKREKPVWPMRIWISGYDIGCVLNLLTV----YGRYRQIYLIQGDALS------LS 149
Query: 162 GDEEERFHGEND----SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLC 217
E++R GE S + ++ F +W+++G W+ S +P+L+ LC
Sbjct: 150 DIEQQRNSGETSVYRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLC 209
Query: 218 VTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TEREGATEEEIDRLPKF 273
+T L ++ IC L+ + +CCC+P I +L Y + + +GA++E+I +LP +
Sbjct: 210 ITLLTWNA----ICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSW 265
Query: 274 K 274
+
Sbjct: 266 R 266
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V++ AV+ S E+P PLRL + Y + +V + L + + S S
Sbjct: 197 VVLTTAVVATSAAERPAWPLRLWVAAYNVG---NVLSLPLLY----------WRHRHSSS 243
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS+ G + HG ND+ ++ + A FL +W+++G W+ + +
Sbjct: 244 SSSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRA 303
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LCV+ LA++ V + + L+ V + + + + GA++E++ L
Sbjct: 304 PRLYALCVSLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAAL 363
Query: 271 PKFKFSRID 279
P+++F D
Sbjct: 364 PRWRFKEPD 372
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L + R +
Sbjct: 77 MLITTTVVATSPKERPAWPLRLWVTAYNVG---NVLSLPLLYWRHQH------------- 120
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
S GD+ E HG D+ + + A FL +W+++G W+ + +
Sbjct: 121 SLAARRGDDPE-MHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 179
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LC+ LA++ V + + L+ V + + + + GA++E++D L
Sbjct: 180 PRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDAL 239
Query: 271 PKFKFSRID 279
P+++F D
Sbjct: 240 PRWRFKEPD 248
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L + R + GD
Sbjct: 492 MLITTTVVATSPKERPAWPLRLWVTAYNVG---NVLSLPLLYWRHQHSLAARRGD----- 543
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
+ HG D+ + + A FL +W+++G W+ + +
Sbjct: 544 ---------DPEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 594
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LC+ LA++ V + + L+ V + + + + GA++E++D L
Sbjct: 595 PRLYALCIGLLAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDAL 654
Query: 271 PKFKFSRID 279
P+++F D
Sbjct: 655 PRWRFKEPD 663
>gi|297790029|ref|XP_002862928.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308705|gb|EFH39187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
+AR L AS R+M REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 85 SARFLSCASSGRVM-REPSMLVREAAAEQLEERQSDWAYFKP 125
>gi|414885022|tpg|DAA61036.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 113
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 213 LYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGIL---YALTEREGATEEEI 267
+Y LC+ FLA CVG A ++ A+CCC PC++ +L L + GAT+E I
Sbjct: 1 MYRLCLAFLALS------CVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELI 54
Query: 268 DRLPKFKFS 276
D LP +KF
Sbjct: 55 DALPTYKFK 63
>gi|297820672|ref|XP_002878219.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
gi|297324057|gb|EFH54478.1| hypothetical protein ARALYDRAFT_907322 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 42 AARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYWAYSRP 83
+AR L AS R+M REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 41 SARFLSCASSGRVM-REPSMLVREAAAEQLEERQSDWAYFKP 81
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
+++ V+ S E+P PLRL + Y + +V + L F R R
Sbjct: 93 MLITTVVVVSSPKERPAWPLRLWVAAYNVG---NVLSLPLLFWRHRH------------- 136
Query: 156 SSTTVTGDEEERFHGENDS--SVAKNLESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS GD+ E HG +D+ + + + A FL +W+++G W+ + +
Sbjct: 137 SSAAGRGDDPE-MHGASDALRNSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRA 195
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LC+ L+++ + + + L+ V + + + + GA++E++ L
Sbjct: 196 PRLYALCIGLLSWNAIVYSLPFLLFLLLCCFVPVVGYALGYNMNSASIGRGASDEQLAAL 255
Query: 271 PKFKFSRID 279
P+++F D
Sbjct: 256 PRWRFKEPD 264
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGS 155
V++ AV+ S E+P PLRL + Y + +V + L + + S S
Sbjct: 197 VVLTTAVVATSAAERPAWPLRLWVAAYNVG---NVLSLPLLY----------WRHRHSSS 243
Query: 156 SSTTVTGDEEERFHGENDSSVAKN--LESANTFLSF---LWWIVGFYWITASGETLISCS 210
SS+ G + HG ND+ ++ + A FL +W+++G W+ + +
Sbjct: 244 SSSAGGGRGDLEMHGANDAPGNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRA 303
Query: 211 PQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRL 270
P+LY LCV+ LA++ V + + L+ V + + + + GA++E++ L
Sbjct: 304 PRLYALCVSLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAAL 363
Query: 271 PKFKFSRID 279
P+++F D
Sbjct: 364 PRWRFKEPD 372
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 213 LYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLPCILGILY---ALTEREGATEEEI 267
+Y LC+ FLA CVG A ++ A+CCC PC++ +L L + GAT+E I
Sbjct: 1 MYRLCLAFLALS------CVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQNRGATQELI 54
Query: 268 DRLPKFKFS 276
D LP +KF
Sbjct: 55 DALPTYKFK 63
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S P ++L+ + ++ + + L +S EKP P+R+ I+GY + C+ + + +++
Sbjct: 81 SSPWMMLEFVALVIQISITMFTLAISKAEKPVWPVRIWIIGYNIGCVLSLLLLYGRYRQI 140
Query: 141 RRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKN---LESANTFLSF---LWWIV 194
+ FG + E++R G +SSV + + T L +W+++
Sbjct: 141 NTTQADGFG----------LPDLEQQR--GSEESSVCRCSILMHKCRTSLELFFAIWFVM 188
Query: 195 GFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILY 254
G W+ S +P+L+ LC++ LA++ + + L+ + +LG
Sbjct: 189 GNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSF-PFLLFLLLCCCVPLISTVLGYNM 247
Query: 255 ALTERE-GATEEEIDRLPKFKFSRID 279
+ E GA++++I LP +++ D
Sbjct: 248 NMGSAERGASDDQISSLPSWRYKAAD 273
>gi|422293880|gb|EKU21180.1| hypothetical protein NGA_0133600 [Nannochloropsis gaditana CCMP526]
Length = 409
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 189 FLWWIVGFYWITASGETLISCSPQ---LYWLCVTFLAFDVV-FVMICVGVACLIGIAVCC 244
+W++VG W+ G+ I P +Y LCV F+ + + CV V ++ + +C
Sbjct: 116 LIWFVVGNMWLFG-GDVEICPHPNRSPVYSLCVAFVFINYAQLCLPCVVVIIMLPV-LCF 173
Query: 245 CLPCILGILYALTER---EGATEEEIDRLPKFKFSRIDG 280
CLPC++ IL + + +GAT I++LP K+ +I
Sbjct: 174 CLPCLIRILARIQDPMRGKGATPSMINKLPMMKYRQIQA 212
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 174 SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
S +AK E NT + + + GF I G+ L+ L+ L + L+ + F +
Sbjct: 100 SCIAKKTEPMNTLVLSAFLVFGFSCIVVGGQALVEVPFLLFGLTMVCLSLNEFFDAVFSF 159
Query: 234 VACLIGIAVCCCLPCILGILYALTE----REGATEEEIDRLPKFKFSRIDGLEKVN 285
LI C+ I+ + YALT+ REGA+E++I LP ++F + + + V+
Sbjct: 160 WIYLIVFGALFCIVQIIALAYALTQPLRIREGASEDDIKSLPMYRFCQPNVMIMVD 215
>gi|297838001|ref|XP_002886882.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332723|gb|EFH63141.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 112
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMIVREAAAEQLEERQSDWAYFKP 28
>gi|297837999|ref|XP_002886881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332722|gb|EFH63140.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMIVREVAAEQLEERQSDWAYFKP 28
>gi|297799898|ref|XP_002867833.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313669|gb|EFH44092.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 99
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE AAEQLEERQS WAY +P
Sbjct: 1 MREPSMLVREAAAEQLEERQSDWAYLQP 28
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 81 SRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRR 140
S ++L+ + L+ + + L +S E P P+R+ I+GY + C+ + + +++
Sbjct: 33 SSSWMMLEFVALLLQICITTFTLAISKAENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQL 92
Query: 141 RRGEGVVFG----DSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGF 196
+G FG + GS ++V R+ S + ++ +W+++G
Sbjct: 93 NATQGDGFGLPDLEQQGGSEESSVC-----RY-----SHLMNKCRTSLELFFAIWFVMGN 142
Query: 197 YWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYAL 256
W+ S +P+L+ LC++ LA++ + + L+ + ++G ++
Sbjct: 143 VWVFDSRFGSYFRAPKLHVLCISLLAWNALSYSF-PFLLFLLLCCCVPLISTVIGYNMSM 201
Query: 257 TERE-GATEEEIDRLPKFKFSRID 279
E GA++++I RLP ++ +D
Sbjct: 202 GSAERGASDDQISRLPSRRYKAVD 225
>gi|297837997|ref|XP_002886880.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332721|gb|EFH63139.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 56 LREPSVRVRETAAEQLEERQSYWAYSRP 83
+REPS+ VRE A EQLEERQS WAY +P
Sbjct: 1 MREPSMIVREAATEQLEERQSDWAYFKP 28
>gi|422294477|gb|EKU21777.1| ring u-box domain-containing protein, partial [Nannochloropsis
gaditana CCMP526]
Length = 326
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 159 TVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCV 218
T G G+ S + + + +W+ +G W+ S + SP ++++ +
Sbjct: 168 TSAGRPHPDEGGQGPSVLVEKAREILDIFALIWFTLGNAWVFGSRYCRFT-SPGIFYVSL 226
Query: 219 TFLAFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTERE----GATEEEIDRLP--K 272
+ V ++ V +A L C C+PC L + L ++ GA+ EI+ LP K
Sbjct: 227 GIIVMTYVTMLFPVLLALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPVVK 286
Query: 273 FKFSRIDGLE 282
F DG E
Sbjct: 287 FGVGMFDGAE 296
>gi|357509167|ref|XP_003624872.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
gi|355499887|gb|AES81090.1| D-mannose binding lectin family protein expressed [Medicago
truncatula]
Length = 617
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 175 SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYW 215
S+ K LE NT S++WW+ F WI + SP+LYW
Sbjct: 577 SIVKKLEPTNTLTSYVWWVFEFNWIVVEWPSASGRSPRLYW 617
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 33/155 (21%)
Query: 90 LWN-------LVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRR 142
LWN LV ++ + VL V+ +E + L ++GY C+ + + L R+
Sbjct: 61 LWNTMELVVTLVQIVASLVVLTVAKDEHLQALLLTWVIGYTCGCIANTLVLLLSCVRKYN 120
Query: 143 GEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITAS 202
GV S T + G V L+ +W ++G WI
Sbjct: 121 RIGVY--------SRTRIDG-------------VMDALKMGIECFFVVWLVLGILWI-CY 158
Query: 203 GETLISCSPQLYWLCVTFLAFDVV----FVMICVG 233
G + S +P+LY LCV F+AF + V++C G
Sbjct: 159 GHSSPSDAPKLYRLCVVFIAFSCIRFAYAVLLCAG 193
>gi|357509173|ref|XP_003624875.1| RING finger protein [Medicago truncatula]
gi|355499890|gb|AES81093.1| RING finger protein [Medicago truncatula]
Length = 400
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 173 DSSVAKNLESANTFLSFLWWIVGF--YWITASGETLI--SCSP-----QLYWLCVTFLAF 223
++ VA N+ SA + L+W++ Y + L+ C P ++ W C+
Sbjct: 193 EALVAGNIVSA---VQSLFWLIAISTYLVGKIHSVLVIHHCGPMALFQEILWKCMVLTFV 249
Query: 224 DVVFVMICVGVA---CLIGIAVCCCLPCILGILYALTE----REGATEEEIDRLPKFKFS 276
+ F C G++ CLI C+ I+ + YAL + REGA+E++I LP ++FS
Sbjct: 250 CLAFNGFCDGISSFSCLIVFGALFCIIQIIVLAYALVQPLRIREGASEDDIKSLPMYRFS 309
Query: 277 RIDGLEKVN 285
+ + + V+
Sbjct: 310 QPNVMIMVD 318
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 165 EERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFD 224
E +H E V++ L N F +W+IVG W++ ET +P LY L + +
Sbjct: 197 ESMYHNE---LVSRWLRLLNAFY-LVWFIVGSIWLSEC-ETCNKTAPHLYRLVLALIV-- 249
Query: 225 VVFVMICVGVACLIGIAVCCCLPCILGILYALTE----REG--ATEEEIDRLP 271
+ + ++ + +AC I CCLP + +L E R G AT E+I+ LP
Sbjct: 250 IYYALLGLPLACFCLIM--CCLPLFIRLLLPYAESTQRRRGRAATAEQINNLP 300
>gi|297846804|ref|XP_002891283.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
gi|297337125|gb|EFH67542.1| hypothetical protein ARALYDRAFT_314116 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 31/135 (22%)
Query: 92 NLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRGEGVVFGDS 151
N+V ++ AF V+ + +E PE + I+GY C+ + + F +
Sbjct: 66 NIVQIVAAFVVVNRAKDEHPETSFLIWIIGYTCGCVAILL--------------IQFINC 111
Query: 152 VSGSSSTTVTGDEEERFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSP 211
VS S + E F F+ W++ F WI S + + +
Sbjct: 112 VSSRSYEVIIDFVTEIFE-----------------YFFVGWVLLFLWIYHSSSSSLYDNT 154
Query: 212 QLYWLCVTFLAFDVV 226
Q +WLC+ FLAF +
Sbjct: 155 QHFWLCMAFLAFTCI 169
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 179 NLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
N ++ L+ +W++VG W+ + + + + + V + IC+ C+
Sbjct: 157 NARNSLDALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICL--PCIF 214
Query: 239 GIAV----CCCLPCILGILYALTER---EGATEEEIDRLPKFKFSRIDGLEKVNG 286
IA+ C CLPC++ +L +L + GAT+ ++ RLP +S + +E + G
Sbjct: 215 AIAMVPVFCFCLPCVIRLLASLHDPVAGRGATKRDLARLPTVPYS--ENMELLKG 267
>gi|163839316|ref|YP_001623721.1| sdenosylmethionine-8-amino-7-oxononanoate aminotransferase
[Renibacterium salmoninarum ATCC 33209]
gi|162952792|gb|ABY22307.1| sdenosylmethionine-8-amino-7-oxononanoate aminotransferase
[Renibacterium salmoninarum ATCC 33209]
Length = 442
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 19 SLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPSVRVRETAAEQLEERQSYW 78
SL + R R LL P PL G A + ASG RL LR+ + R + E ++ S+W
Sbjct: 5 SLAGLIDRDRGLLWHPYAPLNGVAPYAVESASGVRLSLRDNNGR----SYEAIDAMSSWW 60
Query: 79 ----AYSRPIIVLDVLWNLV-FVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVF 131
Y P++ +L L F V F + +P V L ++ + + L HVF
Sbjct: 61 RMVHGYRNPVLDRAILAQLAEFSHVMFG----GLTHEPAVELAEKLRQMSPEPLQHVF 114
>gi|452824772|gb|EME31773.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 351
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 185 TFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCC 244
++LS W+IVG W+ ET + LY L + + +++F+ + V +AC I +
Sbjct: 188 SWLSLAWFIVGMVWVFRC-ETCQRTAVALYRLSLALVIINLIFLGVSVLLACCIFVLAPN 246
Query: 245 CLPCILGILYALT-EREGATEEEIDRLPKFKFSRIDGLEKVNGVLHLPFCL 294
+ ++T R GAT++EIDR+ ++ R E+ P CL
Sbjct: 247 LFRPDFNLDGSVTFHRRGATKKEIDRILLVRYHRDSSEEEST----CPICL 293
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 82 RPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRR 141
R ++V D++++ ++ + VL ++ N+ E PL++ + GY L C
Sbjct: 27 RTLVVTDLIFHGARILFSIFVLYITRNDIVEEPLKVFLTGYILLC--------------- 71
Query: 142 RGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNL-ESANTFLSFLWWIVGFYWIT 200
+ + F S + EE N +V NL E N F W+I+G++W+
Sbjct: 72 AAKAITFFSKNSAFFHINRLPEYEE---SNNGLAVFSNLVEGCNLF----WYILGYHWLQ 124
Query: 201 ASGETLISCSPQLYWLCVTFLAFDVV 226
E P LY+ V +L V
Sbjct: 125 QC-ENCSQTHPLLYYTTVIWLILGFV 149
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.141 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,720,318,226
Number of Sequences: 23463169
Number of extensions: 196978315
Number of successful extensions: 721654
Number of sequences better than 100.0: 251
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 721047
Number of HSP's gapped (non-prelim): 293
length of query: 294
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 153
effective length of database: 9,050,888,538
effective search space: 1384785946314
effective search space used: 1384785946314
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)