Query 022597
Match_columns 294
No_of_seqs 350 out of 2347
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 08:03:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022597.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022597hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 2E-37 6.9E-42 279.6 21.1 216 64-294 4-220 (242)
2 3dr5_A Putative O-methyltransf 100.0 1.8E-36 6.1E-41 270.2 23.1 203 70-293 6-212 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 2.5E-35 8.4E-40 264.5 27.4 216 64-294 12-236 (237)
4 3cbg_A O-methyltransferase; cy 100.0 4.6E-35 1.6E-39 261.3 26.7 226 54-294 6-232 (232)
5 1sui_A Caffeoyl-COA O-methyltr 100.0 2.7E-35 9.4E-40 266.4 24.8 217 63-294 20-246 (247)
6 3tr6_A O-methyltransferase; ce 100.0 1E-33 3.5E-38 248.5 27.9 216 64-294 7-224 (225)
7 2avd_A Catechol-O-methyltransf 100.0 3.7E-33 1.3E-37 245.5 27.1 213 67-294 16-229 (229)
8 3duw_A OMT, O-methyltransferas 100.0 1.9E-32 6.5E-37 240.4 27.2 209 70-294 8-222 (223)
9 3ntv_A MW1564 protein; rossman 100.0 1.6E-32 5.3E-37 244.7 21.6 211 61-294 14-231 (232)
10 3tfw_A Putative O-methyltransf 100.0 1E-31 3.5E-36 242.1 26.0 207 70-294 13-225 (248)
11 2hnk_A SAM-dependent O-methylt 100.0 6.8E-31 2.3E-35 234.1 28.1 216 64-294 4-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 1.9E-30 6.4E-35 226.4 21.5 203 68-294 6-209 (210)
13 2gpy_A O-methyltransferase; st 100.0 2E-27 6.8E-32 210.4 22.6 206 68-294 4-214 (233)
14 3u81_A Catechol O-methyltransf 100.0 4.8E-27 1.7E-31 206.9 22.8 194 70-294 7-213 (221)
15 3cvo_A Methyltransferase-like 99.8 5.8E-19 2E-23 156.4 15.5 149 98-279 11-179 (202)
16 2wk1_A NOVP; transferase, O-me 99.7 8E-18 2.7E-22 156.0 11.0 158 103-293 86-280 (282)
17 2fk8_A Methoxy mycolic acid sy 99.7 1.3E-17 4.4E-22 153.7 9.7 181 27-248 12-198 (318)
18 3hem_A Cyclopropane-fatty-acyl 99.7 5E-18 1.7E-22 155.6 6.7 162 46-248 13-187 (302)
19 1kpg_A CFA synthase;, cyclopro 99.7 5.4E-17 1.8E-21 147.0 9.6 163 45-248 4-172 (287)
20 2b2c_A Spermidine synthase; be 99.6 5.5E-16 1.9E-20 145.3 11.1 149 118-294 107-269 (314)
21 2o07_A Spermidine synthase; st 99.6 1.1E-15 3.8E-20 142.4 11.3 147 118-293 94-255 (304)
22 3p9n_A Possible methyltransfer 99.6 3.2E-14 1.1E-18 121.4 16.1 106 118-245 43-154 (189)
23 3jwh_A HEN1; methyltransferase 99.6 1E-14 3.4E-19 126.8 13.0 164 102-287 12-194 (217)
24 2bm8_A Cephalosporin hydroxyla 99.6 2.2E-15 7.4E-20 134.9 8.9 116 105-245 67-188 (236)
25 3jwg_A HEN1, methyltransferase 99.6 1.4E-14 4.9E-19 125.8 13.9 164 102-287 12-194 (219)
26 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5.2E-19 124.7 13.4 120 103-245 24-143 (204)
27 3bus_A REBM, methyltransferase 99.6 4.5E-15 1.6E-19 132.9 9.9 160 49-248 5-170 (273)
28 1mjf_A Spermidine synthase; sp 99.6 2E-14 6.8E-19 131.9 14.2 145 118-293 74-238 (281)
29 1uir_A Polyamine aminopropyltr 99.6 1.6E-14 5.3E-19 134.9 13.5 149 118-293 76-241 (314)
30 3njr_A Precorrin-6Y methylase; 99.6 3.6E-14 1.2E-18 123.9 14.4 118 102-245 38-155 (204)
31 2esr_A Methyltransferase; stru 99.6 1.8E-14 6E-19 121.2 11.7 107 117-245 29-139 (177)
32 3fpf_A Mtnas, putative unchara 99.6 2.6E-14 9E-19 133.3 13.8 107 113-245 116-223 (298)
33 3orh_A Guanidinoacetate N-meth 99.5 7.3E-15 2.5E-19 131.0 8.6 111 119-252 60-178 (236)
34 3hm2_A Precorrin-6Y C5,15-meth 99.5 3E-14 1E-18 119.1 11.3 115 108-245 14-128 (178)
35 2fhp_A Methylase, putative; al 99.5 8.9E-14 3E-18 117.1 14.2 109 118-245 43-155 (187)
36 4gek_A TRNA (CMO5U34)-methyltr 99.5 9.3E-14 3.2E-18 126.5 14.3 115 109-246 58-180 (261)
37 2ift_A Putative methylase HI07 99.5 7.2E-14 2.5E-18 121.4 12.3 108 118-246 52-165 (201)
38 3mti_A RRNA methylase; SAM-dep 99.5 2.1E-13 7.1E-18 115.4 14.7 132 119-281 22-165 (185)
39 3mb5_A SAM-dependent methyltra 99.5 8.4E-14 2.9E-18 123.8 12.7 118 103-244 77-194 (255)
40 3f4k_A Putative methyltransfer 99.5 8.1E-14 2.8E-18 123.5 11.8 111 116-249 43-155 (257)
41 1l3i_A Precorrin-6Y methyltran 99.5 3E-13 1E-17 113.3 14.5 119 103-245 17-135 (192)
42 1nkv_A Hypothetical protein YJ 99.5 2E-13 7E-18 120.8 13.9 123 103-249 20-145 (256)
43 3eey_A Putative rRNA methylase 99.5 9.2E-14 3.2E-18 118.7 11.3 108 117-244 20-139 (197)
44 2fpo_A Methylase YHHF; structu 99.5 1.5E-13 5.2E-18 119.4 12.5 105 118-245 53-161 (202)
45 1xdz_A Methyltransferase GIDB; 99.5 3E-13 1E-17 120.1 14.6 105 118-243 69-173 (240)
46 3dlc_A Putative S-adenosyl-L-m 99.5 1.5E-13 5.2E-18 117.8 12.1 104 122-248 46-152 (219)
47 3kkz_A Uncharacterized protein 99.5 9.9E-14 3.4E-18 124.4 11.3 110 117-249 44-155 (267)
48 3vc1_A Geranyl diphosphate 2-C 99.5 2E-14 7E-19 132.4 6.9 166 43-248 56-225 (312)
49 1iy9_A Spermidine synthase; ro 99.5 1E-13 3.5E-18 127.0 11.5 105 119-244 75-189 (275)
50 1xj5_A Spermidine synthase 1; 99.5 1.3E-13 4.5E-18 130.2 12.2 113 118-250 119-242 (334)
51 3lpm_A Putative methyltransfer 99.5 1E-13 3.5E-18 124.6 10.0 120 101-242 31-174 (259)
52 3dxy_A TRNA (guanine-N(7)-)-me 99.5 4.3E-13 1.5E-17 118.7 13.5 105 119-243 34-149 (218)
53 3ajd_A Putative methyltransfer 99.5 1.2E-12 4.2E-17 119.2 16.9 123 107-247 71-214 (274)
54 1ws6_A Methyltransferase; stru 99.5 1.1E-12 3.8E-17 108.5 14.4 105 119-245 41-148 (171)
55 1dus_A MJ0882; hypothetical pr 99.5 4.1E-13 1.4E-17 112.7 11.8 103 118-245 51-158 (194)
56 1inl_A Spermidine synthase; be 99.5 2.9E-13 9.8E-18 125.3 11.8 105 119-244 90-205 (296)
57 2ozv_A Hypothetical protein AT 99.5 1.9E-13 6.4E-18 123.7 10.2 119 108-242 25-168 (260)
58 2igt_A SAM dependent methyltra 99.4 2.7E-12 9.3E-17 120.9 17.7 108 119-246 153-274 (332)
59 2pt6_A Spermidine synthase; tr 99.4 5.2E-13 1.8E-17 125.1 12.6 106 118-244 115-230 (321)
60 3m6w_A RRNA methylase; rRNA me 99.4 9.8E-13 3.3E-17 129.5 15.1 124 102-247 84-232 (464)
61 2yxd_A Probable cobalt-precorr 99.4 3.7E-12 1.3E-16 106.1 16.4 114 103-245 19-132 (183)
62 3g89_A Ribosomal RNA small sub 99.4 4.2E-13 1.5E-17 121.1 11.4 103 119-242 80-182 (249)
63 1yzh_A TRNA (guanine-N(7)-)-me 99.4 5.6E-13 1.9E-17 116.0 11.7 104 119-243 41-155 (214)
64 3evz_A Methyltransferase; NYSG 99.4 1.7E-12 5.9E-17 113.4 14.6 136 117-290 53-211 (230)
65 3grz_A L11 mtase, ribosomal pr 99.4 2.1E-12 7E-17 111.2 14.7 101 119-245 60-160 (205)
66 3lbf_A Protein-L-isoaspartate 99.4 5.1E-13 1.8E-17 115.2 10.8 113 103-243 61-173 (210)
67 3dh0_A SAM dependent methyltra 99.4 4.4E-12 1.5E-16 109.6 15.8 111 116-248 34-147 (219)
68 2b3t_A Protein methyltransfera 99.4 1.8E-12 6.2E-17 117.5 14.0 116 104-243 92-237 (276)
69 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.4E-12 4.8E-17 114.3 12.7 104 119-243 38-152 (213)
70 1ixk_A Methyltransferase; open 99.4 1.1E-12 3.8E-17 122.2 12.6 123 102-246 101-248 (315)
71 3adn_A Spermidine synthase; am 99.4 4.8E-13 1.6E-17 124.1 9.8 106 118-244 82-198 (294)
72 1o54_A SAM-dependent O-methylt 99.4 1.5E-12 5.1E-17 117.9 12.8 118 103-244 96-213 (277)
73 1jsx_A Glucose-inhibited divis 99.4 8.1E-13 2.8E-17 113.5 10.5 100 119-243 65-164 (207)
74 4dzr_A Protein-(glutamine-N5) 99.4 3.1E-13 1E-17 115.5 7.7 120 104-243 11-164 (215)
75 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.3E-12 7.9E-17 114.1 13.5 118 103-244 80-198 (258)
76 1zx0_A Guanidinoacetate N-meth 99.4 7.1E-13 2.4E-17 117.0 9.4 105 119-246 60-172 (236)
77 3c0k_A UPF0064 protein YCCW; P 99.4 3.3E-12 1.1E-16 122.2 14.8 113 114-245 215-340 (396)
78 2b25_A Hypothetical protein; s 99.4 2.4E-12 8.2E-17 120.0 13.4 120 103-243 89-218 (336)
79 4htf_A S-adenosylmethionine-de 99.4 2E-12 6.9E-17 116.9 12.4 103 120-245 69-174 (285)
80 2pbf_A Protein-L-isoaspartate 99.4 2.1E-12 7E-17 112.9 12.1 107 117-243 78-192 (227)
81 2frn_A Hypothetical protein PH 99.4 7.9E-13 2.7E-17 120.8 9.7 103 119-246 125-227 (278)
82 3m4x_A NOL1/NOP2/SUN family pr 99.4 1.5E-12 5.1E-17 127.9 12.2 125 102-247 88-237 (456)
83 2i7c_A Spermidine synthase; tr 99.4 2.3E-12 7.8E-17 118.4 12.8 106 119-245 78-193 (283)
84 3ocj_A Putative exported prote 99.4 4.5E-13 1.6E-17 123.0 7.8 109 117-247 116-230 (305)
85 1i9g_A Hypothetical protein RV 99.4 2.2E-12 7.4E-17 116.2 12.0 119 103-244 83-203 (280)
86 2b78_A Hypothetical protein SM 99.4 3.8E-12 1.3E-16 121.9 14.4 109 118-245 211-332 (385)
87 3a27_A TYW2, uncharacterized p 99.4 1.3E-12 4.4E-17 119.2 10.4 112 109-245 109-220 (272)
88 1nv8_A HEMK protein; class I a 99.4 5E-12 1.7E-16 116.3 14.4 116 103-243 104-248 (284)
89 3v97_A Ribosomal RNA large sub 99.4 5.4E-12 1.8E-16 129.8 16.2 122 105-248 525-661 (703)
90 3g5t_A Trans-aconitate 3-methy 99.4 3.9E-12 1.3E-16 116.1 13.5 109 119-242 36-147 (299)
91 3gjy_A Spermidine synthase; AP 99.4 2.4E-12 8.3E-17 121.0 12.3 103 122-245 92-201 (317)
92 1dl5_A Protein-L-isoaspartate 99.4 1.7E-12 6E-17 120.4 11.3 117 103-244 59-175 (317)
93 2as0_A Hypothetical protein PH 99.4 3.6E-12 1.2E-16 121.9 13.7 111 116-245 213-336 (396)
94 2o57_A Putative sarcosine dime 99.4 2.5E-12 8.5E-17 116.8 11.8 110 116-248 79-191 (297)
95 2yvl_A TRMI protein, hypotheti 99.4 2.6E-12 9E-17 113.1 11.5 117 102-244 74-190 (248)
96 1wxx_A TT1595, hypothetical pr 99.4 3.2E-12 1.1E-16 121.9 12.9 110 114-245 205-326 (382)
97 2yxe_A Protein-L-isoaspartate 99.4 2.5E-12 8.7E-17 111.2 11.2 116 104-244 62-177 (215)
98 2nxc_A L11 mtase, ribosomal pr 99.4 1.8E-11 6.3E-16 110.2 17.2 102 118-246 119-220 (254)
99 3gu3_A Methyltransferase; alph 99.4 1.2E-12 4.1E-17 119.0 9.2 108 116-247 19-129 (284)
100 3g07_A 7SK snRNA methylphospha 99.4 1.6E-12 5.6E-17 119.1 10.1 114 119-249 46-225 (292)
101 2frx_A Hypothetical protein YE 99.4 5.1E-12 1.7E-16 124.7 13.8 125 102-247 98-249 (479)
102 3tma_A Methyltransferase; thum 99.4 4.7E-12 1.6E-16 119.1 12.5 120 102-243 186-316 (354)
103 3sso_A Methyltransferase; macr 99.4 1.4E-11 4.8E-16 119.4 16.1 149 119-294 216-392 (419)
104 3gdh_A Trimethylguanosine synt 99.3 3.8E-13 1.3E-17 118.6 4.4 112 108-244 67-181 (241)
105 1g8a_A Fibrillarin-like PRE-rR 99.3 3.1E-12 1E-16 112.0 9.8 102 119-243 73-177 (227)
106 4dmg_A Putative uncharacterize 99.3 8.3E-12 2.8E-16 120.3 13.6 106 115-245 209-327 (393)
107 1sqg_A SUN protein, FMU protei 99.3 2.4E-11 8.2E-16 117.6 16.7 157 103-292 230-425 (429)
108 2cmg_A Spermidine synthase; tr 99.3 3.8E-13 1.3E-17 122.7 3.7 96 119-243 72-170 (262)
109 3kr9_A SAM-dependent methyltra 99.3 4.8E-12 1.6E-16 113.6 10.7 105 119-245 15-120 (225)
110 1vl5_A Unknown conserved prote 99.3 5.7E-12 1.9E-16 112.2 11.1 106 115-245 33-141 (260)
111 1yb2_A Hypothetical protein TA 99.3 1.6E-12 5.5E-17 117.9 7.6 113 107-244 98-211 (275)
112 3k6r_A Putative transferase PH 99.3 5.6E-12 1.9E-16 116.4 11.3 104 117-245 123-226 (278)
113 2xvm_A Tellurite resistance pr 99.3 1.2E-11 4E-16 104.8 12.5 103 116-244 29-136 (199)
114 1i1n_A Protein-L-isoaspartate 99.3 6.9E-12 2.4E-16 109.4 11.4 104 117-244 75-182 (226)
115 2vdv_E TRNA (guanine-N(7)-)-me 99.3 5.7E-12 2E-16 112.3 11.0 105 119-243 49-172 (246)
116 4dcm_A Ribosomal RNA large sub 99.3 4.3E-12 1.5E-16 121.4 10.7 103 118-243 221-333 (375)
117 3ckk_A TRNA (guanine-N(7)-)-me 99.3 8.2E-12 2.8E-16 111.7 11.9 105 119-243 46-167 (235)
118 3dtn_A Putative methyltransfer 99.3 2.5E-12 8.6E-17 112.4 8.3 103 119-247 44-151 (234)
119 3id6_C Fibrillarin-like rRNA/T 99.3 1.5E-11 5E-16 110.8 13.5 105 118-243 75-180 (232)
120 2yxl_A PH0851 protein, 450AA l 99.3 1.2E-11 4.2E-16 120.6 13.9 125 103-247 243-392 (450)
121 3m70_A Tellurite resistance pr 99.3 1.4E-11 4.8E-16 111.4 13.3 101 116-243 117-222 (286)
122 1pjz_A Thiopurine S-methyltran 99.3 6.2E-12 2.1E-16 109.3 10.5 122 102-247 6-143 (203)
123 1fbn_A MJ fibrillarin homologu 99.3 3.5E-12 1.2E-16 112.4 9.1 103 119-243 74-177 (230)
124 1xxl_A YCGJ protein; structura 99.3 1.1E-11 3.7E-16 109.6 12.2 117 105-246 7-126 (239)
125 1jg1_A PIMT;, protein-L-isoasp 99.3 6.8E-12 2.3E-16 110.8 10.9 115 103-244 75-189 (235)
126 3bwc_A Spermidine synthase; SA 99.3 9.7E-12 3.3E-16 115.3 12.2 107 118-244 94-210 (304)
127 3mgg_A Methyltransferase; NYSG 99.3 5.3E-12 1.8E-16 113.2 9.9 107 118-247 36-145 (276)
128 2ipx_A RRNA 2'-O-methyltransfe 99.3 8.5E-12 2.9E-16 109.8 10.6 102 119-243 77-181 (233)
129 4df3_A Fibrillarin-like rRNA/T 99.3 5.2E-12 1.8E-16 113.9 9.4 106 117-243 75-181 (233)
130 1u2z_A Histone-lysine N-methyl 99.3 2.7E-11 9.2E-16 118.3 14.7 124 104-248 227-363 (433)
131 3tos_A CALS11; methyltransfera 99.3 2.7E-11 9.3E-16 110.8 13.6 189 69-292 23-254 (257)
132 3ofk_A Nodulation protein S; N 99.3 4.8E-12 1.7E-16 109.3 8.3 108 110-245 42-155 (216)
133 2ex4_A Adrenal gland protein A 99.3 4E-12 1.4E-16 112.2 7.8 115 108-246 64-187 (241)
134 2dul_A N(2),N(2)-dimethylguano 99.3 2.7E-11 9.3E-16 116.1 14.0 104 118-244 46-164 (378)
135 1wzn_A SAM-dependent methyltra 99.3 2.6E-11 9E-16 107.1 12.9 99 119-244 41-145 (252)
136 3lcc_A Putative methyl chlorid 99.3 1.3E-11 4.5E-16 108.2 10.7 103 119-246 66-173 (235)
137 3htx_A HEN1; HEN1, small RNA m 99.3 8.7E-11 3E-15 122.2 18.4 154 111-287 713-900 (950)
138 1nt2_A Fibrillarin-like PRE-rR 99.3 1.6E-11 5.5E-16 107.8 11.2 103 119-243 57-160 (210)
139 4fsd_A Arsenic methyltransfera 99.3 1.1E-11 3.9E-16 117.9 10.9 118 117-249 81-208 (383)
140 3bkx_A SAM-dependent methyltra 99.3 1.3E-11 4.6E-16 110.3 10.8 115 115-248 39-163 (275)
141 3ujc_A Phosphoethanolamine N-m 99.3 1E-11 3.5E-16 109.8 9.6 105 117-247 53-162 (266)
142 2p7i_A Hypothetical protein; p 99.3 8.9E-12 3E-16 108.6 9.0 107 109-245 32-142 (250)
143 2gb4_A Thiopurine S-methyltran 99.3 1.6E-11 5.6E-16 111.0 10.9 121 102-245 51-192 (252)
144 3axs_A Probable N(2),N(2)-dime 99.3 9.7E-12 3.3E-16 120.0 9.9 105 119-244 52-158 (392)
145 3dmg_A Probable ribosomal RNA 99.3 2.3E-11 7.7E-16 116.7 12.2 115 103-243 212-339 (381)
146 3lec_A NADB-rossmann superfami 99.3 1.9E-11 6.4E-16 110.2 10.9 105 119-245 21-126 (230)
147 3thr_A Glycine N-methyltransfe 99.3 7.1E-11 2.4E-15 106.7 14.5 119 105-244 43-175 (293)
148 1vbf_A 231AA long hypothetical 99.3 1.9E-11 6.6E-16 106.7 10.4 112 103-244 54-165 (231)
149 3dp7_A SAM-dependent methyltra 99.3 3.9E-11 1.3E-15 113.3 13.1 110 118-249 178-292 (363)
150 3ou2_A SAM-dependent methyltra 99.3 2.3E-11 7.9E-16 104.4 10.5 109 108-246 35-148 (218)
151 2qfm_A Spermine synthase; sper 99.3 3.3E-11 1.1E-15 115.1 12.6 108 119-245 188-315 (364)
152 2kw5_A SLR1183 protein; struct 99.3 2.8E-11 9.4E-16 103.5 10.8 102 119-246 29-133 (202)
153 1r18_A Protein-L-isoaspartate( 99.3 9.2E-12 3.2E-16 109.2 8.0 104 117-244 82-194 (227)
154 3q7e_A Protein arginine N-meth 99.3 1.5E-11 5.3E-16 115.9 10.1 107 115-245 62-174 (349)
155 3gnl_A Uncharacterized protein 99.3 2.2E-11 7.6E-16 110.6 10.7 105 119-245 21-126 (244)
156 1y8c_A S-adenosylmethionine-de 99.3 2.8E-11 9.4E-16 105.6 11.0 109 108-243 24-141 (246)
157 2p8j_A S-adenosylmethionine-de 99.3 1.5E-11 5.2E-16 105.3 9.1 116 106-246 10-130 (209)
158 2h00_A Methyltransferase 10 do 99.2 6.4E-12 2.2E-16 111.9 6.6 121 105-242 46-190 (254)
159 2r3s_A Uncharacterized protein 99.2 2.4E-10 8.3E-15 105.3 17.4 107 118-248 164-275 (335)
160 3r0q_C Probable protein argini 99.2 2.1E-11 7E-16 116.3 10.2 104 118-246 62-171 (376)
161 1o9g_A RRNA methyltransferase; 99.2 8.5E-12 2.9E-16 111.2 6.9 109 119-243 51-213 (250)
162 2fyt_A Protein arginine N-meth 99.2 2.3E-11 8E-16 114.4 10.2 105 115-243 60-170 (340)
163 1ve3_A Hypothetical protein PH 99.2 5.3E-11 1.8E-15 103.0 11.6 102 119-246 38-144 (227)
164 2yx1_A Hypothetical protein MJ 99.2 4.2E-11 1.4E-15 112.4 11.8 100 118-246 194-293 (336)
165 3mcz_A O-methyltransferase; ad 99.2 1.2E-10 4.2E-15 108.5 14.8 110 118-249 177-292 (352)
166 1g6q_1 HnRNP arginine N-methyl 99.2 3.9E-11 1.3E-15 112.2 11.4 106 114-243 33-144 (328)
167 3uwp_A Histone-lysine N-methyl 99.2 9.5E-11 3.2E-15 114.0 14.3 124 105-248 159-292 (438)
168 2y1w_A Histone-arginine methyl 99.2 3.5E-11 1.2E-15 113.3 10.8 103 116-243 47-154 (348)
169 3fzg_A 16S rRNA methylase; met 99.2 2.8E-10 9.7E-15 100.2 15.4 158 105-294 34-197 (200)
170 1ri5_A MRNA capping enzyme; me 99.2 5.8E-11 2E-15 106.8 11.3 105 118-244 63-174 (298)
171 3h2b_A SAM-dependent methyltra 99.2 6.4E-11 2.2E-15 101.3 11.0 109 107-246 30-143 (203)
172 2yqz_A Hypothetical protein TT 99.2 4.5E-11 1.6E-15 105.6 10.1 100 118-243 38-140 (263)
173 3tm4_A TRNA (guanine N2-)-meth 99.2 1.5E-10 5.2E-15 110.2 14.4 117 102-242 201-328 (373)
174 1wy7_A Hypothetical protein PH 99.2 2.7E-10 9.3E-15 97.8 14.7 113 101-243 28-148 (207)
175 3dli_A Methyltransferase; PSI- 99.2 2.7E-11 9.2E-16 106.8 8.5 98 118-246 40-142 (240)
176 3g2m_A PCZA361.24; SAM-depende 99.2 2.9E-11 1E-15 110.2 8.8 102 120-246 83-192 (299)
177 3g5l_A Putative S-adenosylmeth 99.2 2.8E-11 9.4E-16 107.2 8.2 98 119-243 44-144 (253)
178 3d2l_A SAM-dependent methyltra 99.2 6.1E-11 2.1E-15 103.6 10.3 96 120-243 34-136 (243)
179 4hc4_A Protein arginine N-meth 99.2 4.7E-11 1.6E-15 114.6 10.3 105 116-245 80-190 (376)
180 3gwz_A MMCR; methyltransferase 99.2 1.6E-10 5.6E-15 109.2 13.9 107 118-249 201-312 (369)
181 3hnr_A Probable methyltransfer 99.2 4.3E-11 1.5E-15 103.4 9.0 110 108-248 35-149 (220)
182 3i53_A O-methyltransferase; CO 99.2 9.1E-11 3.1E-15 108.8 11.9 107 119-250 169-280 (332)
183 3sm3_A SAM-dependent methyltra 99.2 3.5E-11 1.2E-15 104.2 8.3 103 119-245 30-142 (235)
184 2p35_A Trans-aconitate 2-methy 99.2 3.6E-11 1.2E-15 106.3 8.3 97 119-244 33-132 (259)
185 3e23_A Uncharacterized protein 99.2 7.4E-11 2.5E-15 101.6 9.8 97 117-245 41-142 (211)
186 2qm3_A Predicted methyltransfe 99.2 6.4E-11 2.2E-15 112.5 10.2 103 119-243 172-277 (373)
187 3pfg_A N-methyltransferase; N, 99.2 7.1E-11 2.4E-15 105.3 10.0 96 119-245 50-152 (263)
188 3e8s_A Putative SAM dependent 99.2 1.3E-10 4.5E-15 99.9 11.0 108 111-245 44-153 (227)
189 1qzz_A RDMB, aclacinomycin-10- 99.2 1.3E-10 4.6E-15 108.9 11.6 104 117-245 180-288 (374)
190 3bt7_A TRNA (uracil-5-)-methyl 99.2 2.3E-10 8E-15 108.6 13.1 125 99-245 190-327 (369)
191 3ccf_A Cyclopropane-fatty-acyl 99.2 8.4E-11 2.9E-15 106.0 9.3 102 113-245 51-155 (279)
192 1tw3_A COMT, carminomycin 4-O- 99.2 1.9E-10 6.6E-15 107.5 12.0 106 116-246 180-290 (360)
193 4hg2_A Methyltransferase type 99.1 4.9E-11 1.7E-15 108.4 7.5 94 120-244 40-135 (257)
194 3p2e_A 16S rRNA methylase; met 99.1 3.1E-11 1.1E-15 107.2 6.0 102 119-242 24-137 (225)
195 3bkw_A MLL3908 protein, S-aden 99.1 7.3E-11 2.5E-15 103.1 8.3 107 111-244 35-144 (243)
196 2jjq_A Uncharacterized RNA met 99.1 3.4E-10 1.2E-14 110.0 13.8 116 99-243 269-386 (425)
197 1xtp_A LMAJ004091AAA; SGPP, st 99.1 7.6E-11 2.6E-15 103.8 8.3 102 118-245 92-198 (254)
198 3bzb_A Uncharacterized protein 99.1 2.5E-10 8.4E-15 104.3 11.7 108 118-242 78-203 (281)
199 2pjd_A Ribosomal RNA small sub 99.1 1.1E-10 3.6E-15 109.6 9.1 100 118-243 195-302 (343)
200 3i9f_A Putative type 11 methyl 99.1 4.5E-10 1.5E-14 93.3 11.9 100 116-248 14-116 (170)
201 2aot_A HMT, histamine N-methyl 99.1 2.8E-10 9.6E-15 103.6 11.5 109 119-243 52-171 (292)
202 2ip2_A Probable phenazine-spec 99.1 1.6E-10 5.3E-15 107.0 9.9 103 121-248 169-276 (334)
203 1x19_A CRTF-related protein; m 99.1 4.4E-10 1.5E-14 105.4 12.9 106 117-247 188-298 (359)
204 3b3j_A Histone-arginine methyl 99.1 1.2E-10 4.1E-15 114.9 9.5 100 118-242 157-261 (480)
205 3m33_A Uncharacterized protein 99.1 2.7E-11 9.3E-16 106.3 4.4 92 118-241 47-139 (226)
206 1ne2_A Hypothetical protein TA 99.1 6E-10 2.1E-14 95.4 12.7 110 101-244 30-147 (200)
207 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2.2E-10 7.4E-15 107.0 10.5 125 102-246 85-236 (309)
208 3bgv_A MRNA CAP guanine-N7 met 99.1 4.9E-10 1.7E-14 102.9 12.2 108 119-245 34-156 (313)
209 3mq2_A 16S rRNA methyltransfer 99.1 1.9E-10 6.5E-15 99.7 8.7 103 117-243 25-139 (218)
210 3l8d_A Methyltransferase; stru 99.1 1.8E-10 6.1E-15 100.7 8.5 99 119-245 53-154 (242)
211 1ej0_A FTSJ; methyltransferase 99.1 1.7E-10 5.7E-15 94.7 7.7 101 118-245 21-137 (180)
212 3cgg_A SAM-dependent methyltra 99.1 3.2E-10 1.1E-14 95.0 9.6 105 108-244 37-147 (195)
213 2vdw_A Vaccinia virus capping 99.1 4.4E-10 1.5E-14 104.2 11.3 109 120-245 49-170 (302)
214 3q87_B N6 adenine specific DNA 99.1 2.8E-10 9.7E-15 96.0 9.1 104 103-244 6-123 (170)
215 2i62_A Nicotinamide N-methyltr 99.1 4.2E-11 1.4E-15 106.0 4.0 110 118-246 55-200 (265)
216 2qe6_A Uncharacterized protein 99.1 2.9E-09 1E-13 97.1 16.3 113 119-247 77-199 (274)
217 3ege_A Putative methyltransfer 99.1 8.8E-11 3E-15 105.2 5.9 110 104-245 19-131 (261)
218 3ggd_A SAM-dependent methyltra 99.1 4.9E-10 1.7E-14 98.6 10.5 105 118-245 55-164 (245)
219 3bxo_A N,N-dimethyltransferase 99.1 8.8E-10 3E-14 95.9 11.7 98 118-246 39-143 (239)
220 2gs9_A Hypothetical protein TT 99.1 1.8E-10 6.2E-15 99.0 7.0 95 119-246 36-134 (211)
221 1uwv_A 23S rRNA (uracil-5-)-me 99.1 9.6E-10 3.3E-14 106.6 12.9 121 101-243 264-388 (433)
222 2pxx_A Uncharacterized protein 99.1 1.5E-10 5.1E-15 98.9 6.4 102 118-245 41-160 (215)
223 2qy6_A UPF0209 protein YFCK; s 99.1 2.5E-10 8.6E-15 104.1 7.8 108 119-242 60-211 (257)
224 3iv6_A Putative Zn-dependent a 99.0 3.3E-10 1.1E-14 103.6 8.4 101 115-243 41-147 (261)
225 2avn_A Ubiquinone/menaquinone 99.0 8.2E-10 2.8E-14 98.6 9.0 96 119-245 54-153 (260)
226 2a14_A Indolethylamine N-methy 99.0 2E-10 6.9E-15 103.4 5.1 109 119-246 55-199 (263)
227 1p91_A Ribosomal RNA large sub 99.0 4.9E-10 1.7E-14 100.1 7.3 108 105-244 69-178 (269)
228 1zq9_A Probable dimethyladenos 99.0 2E-09 6.9E-14 98.8 11.4 95 101-221 10-104 (285)
229 2f8l_A Hypothetical protein LM 99.0 2.5E-09 8.6E-14 100.1 11.9 117 103-243 110-255 (344)
230 2g72_A Phenylethanolamine N-me 99.0 6.8E-10 2.3E-14 100.7 7.7 111 119-246 71-217 (289)
231 3o4f_A Spermidine synthase; am 98.9 2.8E-09 9.5E-14 99.2 10.3 105 118-243 82-197 (294)
232 3lst_A CALO1 methyltransferase 98.9 3E-09 1E-13 99.5 10.1 105 117-249 182-291 (348)
233 2r6z_A UPF0341 protein in RSP 98.9 8.8E-10 3E-14 100.3 6.3 91 109-219 73-170 (258)
234 2plw_A Ribosomal RNA methyltra 98.9 4.1E-09 1.4E-13 89.8 9.9 98 119-243 22-153 (201)
235 4a6d_A Hydroxyindole O-methylt 98.9 1.1E-08 3.7E-13 96.4 13.6 105 117-247 177-286 (353)
236 1vlm_A SAM-dependent methyltra 98.9 1.9E-09 6.3E-14 93.8 7.6 98 113-246 41-141 (219)
237 3cc8_A Putative methyltransfer 98.9 1.3E-09 4.5E-14 93.7 6.1 97 118-244 31-130 (230)
238 2h1r_A Dimethyladenosine trans 98.9 3.8E-09 1.3E-13 97.6 9.4 91 103-220 26-116 (299)
239 3giw_A Protein of unknown func 98.9 8E-09 2.7E-13 95.4 11.3 114 118-247 77-203 (277)
240 4e2x_A TCAB9; kijanose, tetron 98.9 1.7E-09 5.7E-14 103.3 7.0 101 118-245 106-209 (416)
241 2ih2_A Modification methylase 98.9 2E-09 7E-14 102.3 7.2 111 100-242 20-162 (421)
242 3dou_A Ribosomal RNA large sub 98.9 4E-09 1.4E-13 91.2 8.5 95 118-243 24-138 (191)
243 3k0b_A Predicted N6-adenine-sp 98.9 6.6E-09 2.2E-13 100.0 10.2 119 102-242 184-348 (393)
244 3ldu_A Putative methylase; str 98.8 6.9E-09 2.4E-13 99.5 9.6 117 103-241 179-341 (385)
245 3ldg_A Putative uncharacterize 98.8 1.3E-08 4.6E-13 97.6 11.4 118 103-242 178-341 (384)
246 2nyu_A Putative ribosomal RNA 98.8 9.7E-09 3.3E-13 86.9 9.2 100 118-244 21-145 (196)
247 1m6y_A S-adenosyl-methyltransf 98.8 2E-08 6.8E-13 93.5 12.0 87 116-221 23-109 (301)
248 1af7_A Chemotaxis receptor met 98.8 1.1E-08 3.6E-13 94.1 9.7 105 119-243 105-251 (274)
249 4fzv_A Putative methyltransfer 98.8 4.6E-08 1.6E-12 93.3 14.0 120 106-246 135-286 (359)
250 3lcv_B Sisomicin-gentamicin re 98.8 1.4E-08 4.8E-13 93.4 9.9 156 108-294 120-281 (281)
251 3ll7_A Putative methyltransfer 98.8 8.8E-09 3E-13 99.9 8.1 77 120-219 94-172 (410)
252 2oyr_A UPF0341 protein YHIQ; a 98.8 2E-09 6.7E-14 98.3 3.3 86 111-219 78-173 (258)
253 3opn_A Putative hemolysin; str 98.8 9.4E-10 3.2E-14 98.4 1.0 97 119-242 37-135 (232)
254 3reo_A (ISO)eugenol O-methyltr 98.8 2.9E-08 9.8E-13 93.9 10.7 99 118-249 202-305 (368)
255 2okc_A Type I restriction enzy 98.7 1.8E-08 6E-13 97.9 8.9 120 101-242 153-305 (445)
256 3p9c_A Caffeic acid O-methyltr 98.7 3.8E-08 1.3E-12 93.0 10.8 99 118-249 200-303 (364)
257 3gru_A Dimethyladenosine trans 98.7 6E-08 2E-12 90.1 11.3 94 101-221 32-125 (295)
258 2zfu_A Nucleomethylin, cerebra 98.7 1E-08 3.4E-13 88.4 5.6 95 108-245 56-152 (215)
259 3hp7_A Hemolysin, putative; st 98.7 2E-09 6.8E-14 100.0 1.2 99 119-243 85-184 (291)
260 3tqs_A Ribosomal RNA small sub 98.7 6.7E-08 2.3E-12 87.8 9.8 95 100-219 10-105 (255)
261 3frh_A 16S rRNA methylase; met 98.7 2.7E-07 9.2E-12 83.9 13.4 142 118-294 104-251 (253)
262 3c6k_A Spermine synthase; sper 98.7 6.5E-08 2.2E-12 92.8 9.4 146 119-294 205-378 (381)
263 2ar0_A M.ecoki, type I restric 98.6 1.5E-07 5.1E-12 94.0 11.4 122 101-242 151-310 (541)
264 1fp1_D Isoliquiritigenin 2'-O- 98.6 4.5E-08 1.5E-12 92.3 7.1 98 118-248 208-310 (372)
265 1fp2_A Isoflavone O-methyltran 98.6 7.4E-08 2.5E-12 90.0 8.4 99 117-248 186-292 (352)
266 4azs_A Methyltransferase WBDD; 98.6 1.3E-07 4.3E-12 94.7 9.6 78 118-218 65-142 (569)
267 2xyq_A Putative 2'-O-methyl tr 98.6 7.2E-08 2.5E-12 89.4 6.9 88 119-244 63-171 (290)
268 1qam_A ERMC' methyltransferase 98.6 2.6E-07 8.8E-12 82.7 9.8 77 101-198 12-88 (244)
269 3fut_A Dimethyladenosine trans 98.5 2.4E-07 8.1E-12 85.0 9.0 94 99-220 27-120 (271)
270 3v97_A Ribosomal RNA large sub 98.5 2E-07 6.9E-12 95.8 9.3 121 103-242 174-345 (703)
271 4gqb_A Protein arginine N-meth 98.5 2.3E-07 7.8E-12 94.4 9.2 101 121-244 359-467 (637)
272 2oo3_A Protein involved in cat 98.5 1.9E-07 6.4E-12 86.4 7.6 96 141-242 96-196 (283)
273 3uzu_A Ribosomal RNA small sub 98.5 7.2E-07 2.5E-11 82.0 11.1 99 100-219 23-123 (279)
274 1zg3_A Isoflavanone 4'-O-methy 98.5 3.4E-07 1.2E-11 85.7 8.9 99 117-248 191-297 (358)
275 1yub_A Ermam, rRNA methyltrans 98.4 4.6E-09 1.6E-13 93.7 -4.9 114 102-242 12-143 (245)
276 2wa2_A Non-structural protein 98.4 2.2E-08 7.5E-13 91.9 -0.6 98 119-244 82-193 (276)
277 2p41_A Type II methyltransfera 98.4 6.9E-08 2.3E-12 89.8 2.4 95 119-243 82-190 (305)
278 3ua3_A Protein arginine N-meth 98.4 1E-06 3.6E-11 90.3 11.0 108 120-244 410-534 (745)
279 2oxt_A Nucleoside-2'-O-methylt 98.4 6.3E-08 2.2E-12 88.3 1.6 99 118-244 73-185 (265)
280 3ftd_A Dimethyladenosine trans 98.3 1.4E-06 4.9E-11 78.5 9.1 114 101-242 13-129 (249)
281 3s1s_A Restriction endonucleas 98.3 3.6E-06 1.2E-10 87.6 13.1 145 78-242 272-463 (878)
282 3khk_A Type I restriction-modi 98.3 5.3E-07 1.8E-11 90.2 6.2 124 98-242 224-393 (544)
283 3lkd_A Type I restriction-modi 98.3 2.8E-06 9.6E-11 85.0 10.1 141 83-242 174-356 (542)
284 1qyr_A KSGA, high level kasuga 98.2 3.5E-06 1.2E-10 76.2 9.3 95 103-220 5-100 (252)
285 2ld4_A Anamorsin; methyltransf 98.1 9.5E-07 3.2E-11 73.8 2.4 73 165-245 26-102 (176)
286 1wg8_A Predicted S-adenosylmet 98.0 1.5E-05 5.1E-10 73.7 9.5 85 116-224 19-103 (285)
287 3tka_A Ribosomal RNA small sub 97.8 7.9E-05 2.7E-09 70.5 9.7 86 117-222 55-140 (347)
288 3pvc_A TRNA 5-methylaminomethy 97.5 8.7E-05 3E-09 75.5 5.3 109 121-245 60-212 (689)
289 3ufb_A Type I restriction-modi 97.4 0.00064 2.2E-08 67.6 10.9 148 84-249 176-370 (530)
290 3vyw_A MNMC2; tRNA wobble urid 97.3 0.00073 2.5E-08 63.0 9.1 104 121-243 98-225 (308)
291 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00056 1.9E-08 57.5 7.1 84 120-244 36-121 (153)
292 1i4w_A Mitochondrial replicati 97.1 0.0014 4.9E-08 62.1 8.9 78 101-198 34-117 (353)
293 2zig_A TTHA0409, putative modi 97.1 0.0021 7.3E-08 58.7 9.4 63 110-190 224-288 (297)
294 3s2e_A Zinc-containing alcohol 96.9 0.0032 1.1E-07 58.0 8.8 102 116-245 163-264 (340)
295 1f8f_A Benzyl alcohol dehydrog 96.8 0.0032 1.1E-07 58.8 8.1 104 116-245 187-290 (371)
296 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0038 1.3E-07 58.2 8.3 91 120-243 110-216 (344)
297 1pqw_A Polyketide synthase; ro 96.7 0.0021 7.3E-08 54.3 5.7 102 117-244 36-137 (198)
298 1pl8_A Human sorbitol dehydrog 96.7 0.01 3.5E-07 55.1 10.6 103 115-244 167-273 (356)
299 2dph_A Formaldehyde dismutase; 96.6 0.0031 1.1E-07 59.6 7.0 109 114-245 180-300 (398)
300 4auk_A Ribosomal RNA large sub 96.6 0.0031 1E-07 60.3 6.4 86 118-236 210-295 (375)
301 3m6i_A L-arabinitol 4-dehydrog 96.5 0.015 5.2E-07 53.9 10.8 108 114-245 174-284 (363)
302 2c0c_A Zinc binding alcohol de 96.4 0.0089 3.1E-07 55.7 8.7 102 115-244 159-261 (362)
303 3evf_A RNA-directed RNA polyme 96.4 0.00076 2.6E-08 62.0 1.3 119 103-247 56-186 (277)
304 3ps9_A TRNA 5-methylaminomethy 96.4 0.0095 3.3E-07 60.1 9.5 108 122-245 69-220 (676)
305 4a2c_A Galactitol-1-phosphate 96.4 0.023 7.8E-07 52.1 11.3 107 115-246 156-262 (346)
306 3uog_A Alcohol dehydrogenase; 96.4 0.0051 1.7E-07 57.4 6.9 104 116-246 186-289 (363)
307 4ej6_A Putative zinc-binding d 96.4 0.0077 2.6E-07 56.4 7.9 109 114-245 177-285 (370)
308 3qwb_A Probable quinone oxidor 96.4 0.0053 1.8E-07 56.3 6.5 101 117-244 146-247 (334)
309 4eez_A Alcohol dehydrogenase 1 96.4 0.035 1.2E-06 50.9 12.1 106 115-245 159-264 (348)
310 3fpc_A NADP-dependent alcohol 96.3 0.0083 2.8E-07 55.5 7.7 107 114-246 161-268 (352)
311 3ip1_A Alcohol dehydrogenase, 96.3 0.012 4E-07 55.8 8.8 107 117-245 211-319 (404)
312 3jv7_A ADH-A; dehydrogenase, n 96.3 0.012 4E-07 54.3 8.5 104 116-245 168-271 (345)
313 4b7c_A Probable oxidoreductase 96.3 0.0078 2.7E-07 55.2 7.3 103 115-244 145-248 (336)
314 2py6_A Methyltransferase FKBM; 96.3 0.01 3.5E-07 56.9 8.2 60 118-192 225-288 (409)
315 1e3j_A NADP(H)-dependent ketos 96.3 0.025 8.5E-07 52.3 10.7 108 114-244 163-271 (352)
316 3jyn_A Quinone oxidoreductase; 96.2 0.0063 2.2E-07 55.7 6.4 102 117-245 138-240 (325)
317 1e3i_A Alcohol dehydrogenase, 96.2 0.011 3.6E-07 55.3 8.0 103 116-245 192-298 (376)
318 1rjw_A ADH-HT, alcohol dehydro 96.2 0.015 5.1E-07 53.6 8.9 101 116-244 161-261 (339)
319 2c7p_A Modification methylase 96.2 0.005 1.7E-07 57.5 5.4 93 121-245 12-121 (327)
320 1cdo_A Alcohol dehydrogenase; 96.2 0.013 4.3E-07 54.7 8.2 103 116-245 189-295 (374)
321 1kol_A Formaldehyde dehydrogen 96.2 0.021 7.2E-07 53.7 9.8 108 115-245 181-301 (398)
322 1p0f_A NADP-dependent alcohol 96.2 0.01 3.5E-07 55.4 7.4 104 116-245 188-294 (373)
323 2px2_A Genome polyprotein [con 96.1 0.0029 1E-07 57.7 3.2 95 118-243 72-182 (269)
324 3gcz_A Polyprotein; flavivirus 96.0 0.0011 3.8E-08 61.0 0.2 116 103-243 72-200 (282)
325 4eye_A Probable oxidoreductase 96.0 0.012 4.2E-07 54.3 7.2 100 117-244 157-257 (342)
326 4dup_A Quinone oxidoreductase; 96.0 0.012 4E-07 54.7 7.1 101 117-245 165-266 (353)
327 3uko_A Alcohol dehydrogenase c 96.0 0.01 3.4E-07 55.6 6.5 105 116-246 190-297 (378)
328 1v3u_A Leukotriene B4 12- hydr 96.0 0.013 4.4E-07 53.6 7.0 102 116-244 142-244 (333)
329 2jhf_A Alcohol dehydrogenase E 95.9 0.017 5.9E-07 53.8 7.8 103 116-245 188-294 (374)
330 2fzw_A Alcohol dehydrogenase c 95.9 0.016 5.5E-07 53.9 7.5 103 116-245 187-293 (373)
331 1g60_A Adenine-specific methyl 95.9 0.018 6.1E-07 51.5 7.5 57 110-184 201-259 (260)
332 1vj0_A Alcohol dehydrogenase, 95.9 0.018 6.1E-07 54.0 7.8 103 117-245 193-299 (380)
333 4dvj_A Putative zinc-dependent 95.8 0.036 1.2E-06 51.7 9.6 98 119-243 171-269 (363)
334 2h6e_A ADH-4, D-arabinose 1-de 95.8 0.028 9.4E-07 51.8 8.5 101 116-244 168-269 (344)
335 1uuf_A YAHK, zinc-type alcohol 95.8 0.067 2.3E-06 50.0 11.1 98 116-244 191-288 (369)
336 1qor_A Quinone oxidoreductase; 95.7 0.014 4.8E-07 53.2 6.1 101 117-244 138-239 (327)
337 2j3h_A NADP-dependent oxidored 95.7 0.016 5.5E-07 53.2 6.4 102 116-244 152-255 (345)
338 3eld_A Methyltransferase; flav 95.6 0.043 1.5E-06 50.8 9.1 100 118-243 80-190 (300)
339 1g55_A DNA cytosine methyltran 95.6 0.026 8.9E-07 52.7 7.6 75 121-219 3-77 (343)
340 3fbg_A Putative arginate lyase 95.6 0.045 1.5E-06 50.5 9.2 96 119-242 150-246 (346)
341 3gms_A Putative NADPH:quinone 95.6 0.0097 3.3E-07 54.8 4.6 104 116-245 141-244 (340)
342 3b5i_A S-adenosyl-L-methionine 95.6 0.072 2.5E-06 50.7 10.7 24 222-245 203-226 (374)
343 3lkz_A Non-structural protein 95.6 0.056 1.9E-06 50.3 9.5 118 102-246 75-205 (321)
344 3two_A Mannitol dehydrogenase; 95.5 0.047 1.6E-06 50.3 9.0 94 116-245 173-266 (348)
345 2d8a_A PH0655, probable L-thre 95.5 0.028 9.5E-07 51.9 7.4 100 119-244 167-267 (348)
346 1wly_A CAAR, 2-haloacrylate re 95.5 0.018 6E-07 52.8 5.9 101 117-244 143-244 (333)
347 2hcy_A Alcohol dehydrogenase 1 95.5 0.044 1.5E-06 50.5 8.6 104 116-245 166-270 (347)
348 3gaz_A Alcohol dehydrogenase s 95.4 0.034 1.2E-06 51.3 7.7 97 117-243 148-245 (343)
349 1g60_A Adenine-specific methyl 95.4 0.011 3.9E-07 52.7 4.3 53 187-243 4-73 (260)
350 2b5w_A Glucose dehydrogenase; 95.4 0.034 1.2E-06 51.5 7.6 101 115-245 162-274 (357)
351 2qrv_A DNA (cytosine-5)-methyl 95.4 0.04 1.4E-06 50.7 7.8 100 122-246 18-142 (295)
352 2eih_A Alcohol dehydrogenase; 95.4 0.02 6.7E-07 52.8 5.8 101 117-244 164-265 (343)
353 3g7u_A Cytosine-specific methy 95.3 0.068 2.3E-06 50.7 9.3 99 122-245 4-120 (376)
354 1jvb_A NAD(H)-dependent alcoho 95.2 0.038 1.3E-06 50.9 7.4 105 116-244 167-271 (347)
355 3p8z_A Mtase, non-structural p 95.2 0.2 6.8E-06 45.3 11.4 117 102-246 59-187 (267)
356 1boo_A Protein (N-4 cytosine-s 95.1 0.017 5.9E-07 53.4 4.5 54 186-243 13-83 (323)
357 2zb4_A Prostaglandin reductase 95.0 0.043 1.5E-06 50.7 6.9 103 116-244 155-260 (357)
358 3krt_A Crotonyl COA reductase; 94.9 0.043 1.5E-06 52.7 6.9 102 116-244 225-344 (456)
359 1piw_A Hypothetical zinc-type 94.9 0.062 2.1E-06 49.8 7.7 100 116-244 176-276 (360)
360 3ubt_Y Modification methylase 94.8 0.029 9.8E-07 51.3 5.2 92 140-245 3-111 (331)
361 1iz0_A Quinone oxidoreductase; 94.8 0.12 4E-06 46.6 9.2 93 117-243 123-217 (302)
362 1yb5_A Quinone oxidoreductase; 94.8 0.042 1.4E-06 51.0 6.4 102 117-244 168-269 (351)
363 1eg2_A Modification methylase 94.8 0.03 1E-06 52.0 5.1 54 186-243 37-105 (319)
364 2efj_A 3,7-dimethylxanthine me 94.8 0.11 3.8E-06 49.6 9.3 105 120-245 53-226 (384)
365 2uyo_A Hypothetical protein ML 94.7 0.51 1.7E-05 43.5 13.4 110 119-246 102-220 (310)
366 3pi7_A NADH oxidoreductase; gr 94.5 0.086 2.9E-06 48.5 7.8 87 146-245 178-264 (349)
367 4a0s_A Octenoyl-COA reductase/ 94.5 0.093 3.2E-06 50.0 8.2 104 116-244 217-336 (447)
368 2j8z_A Quinone oxidoreductase; 94.4 0.075 2.6E-06 49.2 7.0 102 117-245 160-262 (354)
369 2dq4_A L-threonine 3-dehydroge 94.2 0.044 1.5E-06 50.4 4.9 95 119-244 164-262 (343)
370 2cf5_A Atccad5, CAD, cinnamyl 94.2 0.22 7.4E-06 46.1 9.7 96 119-244 180-275 (357)
371 3gqv_A Enoyl reductase; medium 94.1 0.19 6.6E-06 46.7 9.2 99 118-244 163-263 (371)
372 2zig_A TTHA0409, putative modi 94.0 0.045 1.5E-06 49.8 4.5 54 186-243 20-96 (297)
373 1gu7_A Enoyl-[acyl-carrier-pro 93.8 0.16 5.6E-06 46.8 8.1 108 117-245 164-276 (364)
374 1eg2_A Modification methylase 93.8 0.038 1.3E-06 51.3 3.7 56 110-183 231-291 (319)
375 3fwz_A Inner membrane protein 93.8 0.43 1.5E-05 38.0 9.6 93 121-242 8-103 (140)
376 1boo_A Protein (N-4 cytosine-s 93.7 0.025 8.5E-07 52.3 2.2 60 119-198 252-311 (323)
377 1xa0_A Putative NADPH dependen 93.6 0.088 3E-06 47.9 5.8 95 122-245 152-247 (328)
378 1yqd_A Sinapyl alcohol dehydro 93.5 0.31 1.1E-05 45.2 9.5 96 119-244 187-282 (366)
379 2cdc_A Glucose dehydrogenase g 93.4 0.17 5.8E-06 46.9 7.5 95 120-245 181-279 (366)
380 3nx4_A Putative oxidoreductase 93.4 0.067 2.3E-06 48.5 4.5 93 122-245 149-242 (324)
381 1rjd_A PPM1P, carboxy methyl t 93.2 1.2 4E-05 41.5 12.9 111 118-246 96-235 (334)
382 3tqh_A Quinone oxidoreductase; 92.9 0.21 7.2E-06 45.3 7.1 97 114-243 147-244 (321)
383 2vn8_A Reticulon-4-interacting 92.6 0.23 7.8E-06 46.2 7.1 98 117-243 181-279 (375)
384 2eez_A Alanine dehydrogenase; 92.5 0.49 1.7E-05 44.3 9.2 100 118-244 164-266 (369)
385 1h2b_A Alcohol dehydrogenase; 92.5 0.31 1.1E-05 45.1 7.7 102 115-244 182-285 (359)
386 4a27_A Synaptic vesicle membra 92.4 0.11 3.8E-06 47.8 4.6 99 116-244 139-238 (349)
387 3goh_A Alcohol dehydrogenase, 92.3 0.059 2E-06 48.8 2.5 89 117-243 140-228 (315)
388 1pjc_A Protein (L-alanine dehy 92.1 0.42 1.4E-05 44.6 8.2 97 119-242 166-265 (361)
389 1m6e_X S-adenosyl-L-methionnin 92.0 0.029 9.8E-07 53.2 0.1 107 121-245 53-210 (359)
390 3me5_A Cytosine-specific methy 91.9 0.2 6.8E-06 49.2 5.9 58 122-199 90-147 (482)
391 2vhw_A Alanine dehydrogenase; 91.9 0.41 1.4E-05 45.1 7.9 99 118-243 166-267 (377)
392 3ggo_A Prephenate dehydrogenas 91.8 0.49 1.7E-05 43.4 8.2 89 121-243 34-126 (314)
393 2g5c_A Prephenate dehydrogenas 91.6 0.76 2.6E-05 40.6 9.0 80 146-241 10-93 (281)
394 3c85_A Putative glutathione-re 91.6 0.91 3.1E-05 37.4 8.9 98 120-243 39-138 (183)
395 2vz8_A Fatty acid synthase; tr 91.4 0.073 2.5E-06 61.8 2.5 102 120-245 1241-1349(2512)
396 1lss_A TRK system potassium up 91.4 2.4 8.3E-05 32.4 10.8 95 121-241 5-100 (140)
397 2y0c_A BCEC, UDP-glucose dehyd 91.3 0.52 1.8E-05 45.9 8.1 101 118-245 6-129 (478)
398 2aef_A Calcium-gated potassium 90.9 2.1 7E-05 36.7 10.9 96 120-243 9-104 (234)
399 1tt7_A YHFP; alcohol dehydroge 90.7 0.11 3.7E-06 47.3 2.5 95 122-245 153-248 (330)
400 3iup_A Putative NADPH:quinone 90.7 0.26 9E-06 46.0 5.2 90 118-230 169-261 (379)
401 3llv_A Exopolyphosphatase-rela 90.6 1.8 6.2E-05 33.8 9.5 70 121-219 7-79 (141)
402 4h0n_A DNMT2; SAH binding, tra 90.6 0.79 2.7E-05 42.6 8.4 89 146-245 14-120 (333)
403 4dcm_A Ribosomal RNA large sub 90.5 0.84 2.9E-05 42.9 8.6 93 121-243 40-135 (375)
404 3pid_A UDP-glucose 6-dehydroge 90.5 1.9 6.4E-05 41.7 11.1 99 121-249 37-158 (432)
405 1id1_A Putative potassium chan 90.4 1.7 5.7E-05 34.8 9.2 97 120-242 3-103 (153)
406 4ezb_A Uncharacterized conserv 90.3 1.2 4.3E-05 40.5 9.3 89 121-242 25-119 (317)
407 3qv2_A 5-cytosine DNA methyltr 90.0 0.75 2.6E-05 42.7 7.6 73 122-219 12-85 (327)
408 3gg2_A Sugar dehydrogenase, UD 89.8 1.7 5.8E-05 41.9 10.3 90 146-245 11-123 (450)
409 2g1u_A Hypothetical protein TM 89.6 0.96 3.3E-05 36.4 7.2 98 119-242 18-116 (155)
410 3ic5_A Putative saccharopine d 89.3 3.4 0.00012 30.6 9.7 80 121-230 6-89 (118)
411 3iht_A S-adenosyl-L-methionine 88.8 2.2 7.4E-05 36.1 8.8 101 122-247 43-150 (174)
412 3k96_A Glycerol-3-phosphate de 88.8 1.9 6.7E-05 40.1 9.6 94 121-241 30-130 (356)
413 2f1k_A Prephenate dehydrogenas 88.5 2.2 7.4E-05 37.5 9.3 79 146-241 9-88 (279)
414 3oig_A Enoyl-[acyl-carrier-pro 88.3 4.5 0.00015 35.0 11.1 84 119-219 6-96 (266)
415 1zsy_A Mitochondrial 2-enoyl t 88.2 0.4 1.4E-05 44.2 4.3 103 116-244 164-270 (357)
416 1bg6_A N-(1-D-carboxylethyl)-L 88.1 2.3 7.8E-05 38.5 9.4 94 121-243 5-108 (359)
417 3l9w_A Glutathione-regulated p 88.1 1.7 5.7E-05 41.6 8.7 93 121-242 5-100 (413)
418 4e12_A Diketoreductase; oxidor 88.0 3.8 0.00013 36.4 10.7 96 121-244 5-120 (283)
419 1lnq_A MTHK channels, potassiu 88.0 4.1 0.00014 36.9 11.0 95 120-242 115-209 (336)
420 4e21_A 6-phosphogluconate dehy 87.7 2.4 8.2E-05 39.6 9.5 90 120-241 22-112 (358)
421 3gt0_A Pyrroline-5-carboxylate 87.7 0.57 1.9E-05 40.9 4.8 86 122-241 4-94 (247)
422 4eso_A Putative oxidoreductase 87.2 4.7 0.00016 35.0 10.5 81 118-219 6-91 (255)
423 1dlj_A UDP-glucose dehydrogena 86.9 4.6 0.00016 38.0 11.1 82 146-242 9-115 (402)
424 3ce6_A Adenosylhomocysteinase; 86.5 1.4 4.8E-05 43.3 7.3 89 117-242 271-359 (494)
425 2v6b_A L-LDH, L-lactate dehydr 86.5 5.2 0.00018 36.2 10.8 96 122-242 2-114 (304)
426 4fgs_A Probable dehydrogenase 86.5 6.3 0.00022 35.4 11.2 83 116-219 25-112 (273)
427 3grk_A Enoyl-(acyl-carrier-pro 86.4 11 0.00039 33.3 12.9 84 118-219 29-118 (293)
428 2ew2_A 2-dehydropantoate 2-red 86.3 2.2 7.4E-05 37.7 8.0 90 122-242 5-106 (316)
429 3b1f_A Putative prephenate deh 86.3 2.4 8.3E-05 37.4 8.3 88 121-241 7-98 (290)
430 3l4b_C TRKA K+ channel protien 86.3 4.5 0.00015 34.2 9.7 86 146-242 9-97 (218)
431 1lld_A L-lactate dehydrogenase 86.3 6 0.00021 35.4 11.1 94 121-242 8-122 (319)
432 3pxx_A Carveol dehydrogenase; 85.9 9.8 0.00033 33.0 12.0 106 119-242 9-151 (287)
433 4fs3_A Enoyl-[acyl-carrier-pro 85.8 8.5 0.00029 33.5 11.5 86 118-219 4-95 (256)
434 3ioy_A Short-chain dehydrogena 85.6 5.4 0.00019 36.0 10.5 85 119-219 7-96 (319)
435 2dpo_A L-gulonate 3-dehydrogen 85.6 7.1 0.00024 35.8 11.3 96 121-244 7-122 (319)
436 2vz8_A Fatty acid synthase; tr 85.5 2.4 8.1E-05 49.4 9.5 103 117-242 1665-1768(2512)
437 1f0y_A HCDH, L-3-hydroxyacyl-C 85.5 7.5 0.00026 34.6 11.2 94 121-241 16-133 (302)
438 1l7d_A Nicotinamide nucleotide 85.4 1.2 4.1E-05 41.9 6.0 43 119-177 171-213 (384)
439 3k31_A Enoyl-(acyl-carrier-pro 85.3 7.2 0.00025 34.6 11.0 84 119-219 29-117 (296)
440 3tri_A Pyrroline-5-carboxylate 85.2 1.8 6.1E-05 38.8 6.9 87 121-241 4-95 (280)
441 4a7p_A UDP-glucose dehydrogena 84.6 8.5 0.00029 37.1 11.8 104 119-249 7-134 (446)
442 3ijr_A Oxidoreductase, short c 84.1 11 0.00037 33.4 11.5 106 119-242 46-180 (291)
443 1xg5_A ARPG836; short chain de 84.0 5.4 0.00019 34.8 9.4 85 119-219 31-120 (279)
444 1y6j_A L-lactate dehydrogenase 83.8 3.8 0.00013 37.5 8.6 98 120-242 7-121 (318)
445 3ek2_A Enoyl-(acyl-carrier-pro 83.8 8.8 0.0003 32.9 10.6 84 118-219 12-101 (271)
446 3d1l_A Putative NADP oxidoredu 83.6 3.7 0.00013 35.7 8.1 87 121-241 11-99 (266)
447 3c24_A Putative oxidoreductase 83.2 6.4 0.00022 34.8 9.6 85 121-241 12-98 (286)
448 1wma_A Carbonyl reductase [NAD 83.2 7.1 0.00024 33.2 9.6 83 119-219 3-91 (276)
449 3p2y_A Alanine dehydrogenase/p 83.1 1.8 6.1E-05 41.2 6.1 102 119-249 183-307 (381)
450 1x0v_A GPD-C, GPDH-C, glycerol 83.1 2 7E-05 39.0 6.4 94 121-241 9-121 (354)
451 3d4o_A Dipicolinate synthase s 83.1 5.8 0.0002 35.5 9.3 89 118-241 153-241 (293)
452 2gdz_A NAD+-dependent 15-hydro 83.0 12 0.00041 32.3 11.2 85 119-219 6-95 (267)
453 3c7a_A Octopine dehydrogenase; 82.8 8.9 0.0003 35.6 10.9 96 122-242 4-114 (404)
454 2xxj_A L-LDH, L-lactate dehydr 82.7 15 0.0005 33.4 12.0 74 122-219 2-76 (310)
455 3av4_A DNA (cytosine-5)-methyl 82.7 2.5 8.5E-05 46.4 7.8 98 122-245 853-981 (1330)
456 3hwr_A 2-dehydropantoate 2-red 82.6 2.8 9.6E-05 38.0 7.1 91 120-242 19-118 (318)
457 3t4x_A Oxidoreductase, short c 82.3 6.4 0.00022 34.2 9.1 83 119-219 9-94 (267)
458 1zcj_A Peroxisomal bifunctiona 82.1 11 0.00038 36.2 11.5 96 121-245 38-150 (463)
459 2cvz_A Dehydrogenase, 3-hydrox 81.9 2.6 8.9E-05 36.9 6.4 85 122-242 3-88 (289)
460 2rir_A Dipicolinate synthase, 81.7 11 0.00036 33.8 10.6 89 118-241 155-243 (300)
461 3i42_A Response regulator rece 81.7 13 0.00045 27.3 9.7 77 160-243 4-84 (127)
462 3ktd_A Prephenate dehydrogenas 81.3 3.7 0.00013 38.2 7.5 90 121-243 9-99 (341)
463 1mv8_A GMD, GDP-mannose 6-dehy 81.2 4.5 0.00015 38.4 8.2 87 146-242 9-121 (436)
464 1x13_A NAD(P) transhydrogenase 81.2 1.7 5.7E-05 41.3 5.2 41 119-175 171-211 (401)
465 3i83_A 2-dehydropantoate 2-red 81.2 7.1 0.00024 35.2 9.3 94 121-242 3-103 (320)
466 2qyt_A 2-dehydropantoate 2-red 81.1 6.4 0.00022 34.8 8.8 34 209-242 82-115 (317)
467 1ez4_A Lactate dehydrogenase; 81.1 10 0.00036 34.6 10.4 75 121-219 6-81 (318)
468 1hyh_A L-hicdh, L-2-hydroxyiso 81.0 10 0.00035 34.0 10.3 72 160-242 27-120 (309)
469 4fn4_A Short chain dehydrogena 80.9 12 0.00041 33.1 10.5 84 118-219 5-93 (254)
470 2izz_A Pyrroline-5-carboxylate 80.8 6.2 0.00021 35.7 8.8 86 121-241 23-115 (322)
471 3grc_A Sensor protein, kinase; 80.7 16 0.00054 27.4 10.1 78 159-243 6-87 (140)
472 1jay_A Coenzyme F420H2:NADP+ o 80.7 11 0.00039 31.2 9.8 86 146-245 10-97 (212)
473 3hn2_A 2-dehydropantoate 2-red 80.6 1.8 6.1E-05 39.1 5.0 34 209-242 68-101 (312)
474 1ldn_A L-lactate dehydrogenase 80.2 21 0.00072 32.3 12.2 76 120-219 6-83 (316)
475 3hzh_A Chemotaxis response reg 79.8 12 0.0004 29.1 9.1 81 160-244 37-119 (157)
476 3kht_A Response regulator; PSI 79.8 17 0.00059 27.4 10.9 81 159-244 5-89 (144)
477 3g79_A NDP-N-acetyl-D-galactos 79.7 5.6 0.00019 38.8 8.5 103 119-249 17-152 (478)
478 3r3s_A Oxidoreductase; structu 79.7 13 0.00044 32.9 10.4 106 119-242 48-183 (294)
479 3edm_A Short chain dehydrogena 79.6 13 0.00046 32.0 10.2 84 118-219 6-95 (259)
480 2pv7_A T-protein [includes: ch 79.5 7.6 0.00026 34.7 8.8 73 121-241 22-96 (298)
481 3o38_A Short chain dehydrogena 79.4 8.4 0.00029 33.2 8.8 84 119-219 21-110 (266)
482 2zqz_A L-LDH, L-lactate dehydr 79.4 11 0.00039 34.5 10.1 76 120-219 9-85 (326)
483 1evy_A Glycerol-3-phosphate de 79.3 3.4 0.00012 37.9 6.5 93 122-241 17-121 (366)
484 3g0o_A 3-hydroxyisobutyrate de 79.3 3.5 0.00012 36.9 6.5 87 121-241 8-99 (303)
485 2hmt_A YUAA protein; RCK, KTN, 79.3 6 0.00021 30.2 7.1 94 120-241 6-101 (144)
486 3cg0_A Response regulator rece 79.3 13 0.00044 27.7 9.0 78 159-243 9-89 (140)
487 3vtf_A UDP-glucose 6-dehydroge 79.2 8.6 0.00029 37.2 9.5 95 146-250 30-150 (444)
488 3oj0_A Glutr, glutamyl-tRNA re 79.0 7.1 0.00024 30.7 7.6 90 115-241 16-107 (144)
489 3ksu_A 3-oxoacyl-acyl carrier 78.8 20 0.00067 31.0 11.1 83 119-219 10-100 (262)
490 3qha_A Putative oxidoreductase 78.7 2.5 8.5E-05 37.9 5.3 86 121-242 16-103 (296)
491 4f3n_A Uncharacterized ACR, CO 78.6 3 0.0001 40.4 6.0 66 101-181 115-188 (432)
492 4dio_A NAD(P) transhydrogenase 78.4 2.6 8.8E-05 40.4 5.5 43 119-177 189-231 (405)
493 2rjn_A Response regulator rece 78.4 20 0.00067 27.5 10.0 78 159-243 7-86 (154)
494 3eul_A Possible nitrate/nitrit 78.3 14 0.00048 28.3 9.1 81 159-244 15-97 (152)
495 2qr3_A Two-component system re 78.1 17 0.00058 27.1 9.3 77 160-243 4-87 (140)
496 3n74_A 3-ketoacyl-(acyl-carrie 78.0 29 0.00098 29.5 11.8 80 119-219 8-92 (261)
497 3f6c_A Positive transcription 78.0 14 0.00048 27.4 8.8 76 161-243 3-81 (134)
498 3pef_A 6-phosphogluconate dehy 78.0 1.7 5.8E-05 38.6 3.9 86 121-241 2-92 (287)
499 3ucx_A Short chain dehydrogena 77.9 16 0.00054 31.6 10.2 84 118-219 9-97 (264)
500 3eod_A Protein HNR; response r 77.9 18 0.00063 26.6 10.9 78 159-243 7-86 (130)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2e-37 Score=279.63 Aligned_cols=216 Identities=39% Similarity=0.711 Sum_probs=199.1
Q ss_pred cccCCChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEcccccccccccccccc
Q 022597 64 QVISVTPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILS 142 (294)
Q Consensus 64 ~~~~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~ 142 (294)
..+.+++.+++|+.++ ..+++.++++++.+.....+.|.+++.++++|..++...++++|||||||+
T Consensus 4 ~~~~~~~~~~~Y~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~------------ 71 (242)
T 3r3h_A 4 KHLSLTPELYKYLLDISLREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFT------------ 71 (242)
T ss_dssp CCCCCCHHHHHHHHHHHCCCCHHHHHHHHTTSSSGGGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCC------------
T ss_pred CcccCCHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCc------------
Confidence 4566889999999997 577899999999887776667889999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc
Q 022597 143 LFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM 222 (294)
Q Consensus 143 ~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~ 222 (294)
|+++++++..++++++|+++|+++++++.|+++++.+|+.++++++.+|+.+.++.+...+..++||+||+|+++..
T Consensus 72 ---G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~~ 148 (242)
T 3r3h_A 72 ---GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKTN 148 (242)
T ss_dssp ---SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGGG
T ss_pred ---CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChHH
Confidence 99999999998878999999999999999999999999998999999999988876643322478999999999999
Q ss_pred hHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 223 YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 223 ~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
+..+++.+.++|+|||++++||++|+|.+.++...++.+.++++|++.+.++|+++++++|+|||+++++||
T Consensus 149 ~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 220 (242)
T 3r3h_A 149 YLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI 220 (242)
T ss_dssp HHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEEEEEC
T ss_pred hHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEccCceEEEEEc
Confidence 999999999999999999999999999999988888889999999999999999999999999999999986
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-36 Score=270.22 Aligned_cols=203 Identities=22% Similarity=0.328 Sum_probs=187.8
Q ss_pred hhHHHHHHhcCCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCC---eEEEEccccccccccccccccCCCc
Q 022597 70 PPLYDYILRNVREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQ---RCIEVGVYTVCVSSYSTSILSLFSG 146 (294)
Q Consensus 70 ~~l~~Y~~~~~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~---~vLEiG~g~~~~~~~~~~~~~~~aG 146 (294)
+.+.+|+.++.++++.++++++.+.... .+.++|.++++|..++...+++ +|||||||+ |
T Consensus 6 ~~~~~y~~~~~~~~~~l~~~~~~a~~~~--~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~---------------G 68 (221)
T 3dr5_A 6 EYLRTYVESTTETDAAVARAREDAAEFG--LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAA---------------G 68 (221)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTH---------------H
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHcC--CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCc---------------h
Confidence 5678999998888999999999987764 3467999999999999999988 999999999 9
Q ss_pred HHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC-CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHH
Q 022597 147 YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQE 225 (294)
Q Consensus 147 ~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~-~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~ 225 (294)
+++++++..++++++|+++|+++++++.|+++++++|+. ++++++.+|+.+.++.+. .++||+||+|+++..|.+
T Consensus 69 ~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~----~~~fD~V~~d~~~~~~~~ 144 (221)
T 3dr5_A 69 LVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA----NDSYQLVFGQVSPMDLKA 144 (221)
T ss_dssp HHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC----TTCEEEEEECCCTTTHHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc----CCCcCeEEEcCcHHHHHH
Confidence 999999999987899999999999999999999999998 899999999988765441 478999999999999999
Q ss_pred HHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 022597 226 YFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 293 (294)
Q Consensus 226 ~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k 293 (294)
+++.+.++|+|||++++||++|+|.+.++...++.+.++++|++.+.++|+++++++|+|||+++++|
T Consensus 145 ~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~ 212 (221)
T 3dr5_A 145 LVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVTK 212 (221)
T ss_dssp HHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHHH
Confidence 99999999999999999999999999998878888889999999999999999999999999999997
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=2.5e-35 Score=264.45 Aligned_cols=216 Identities=38% Similarity=0.647 Sum_probs=194.2
Q ss_pred cccCCChhHHHHHHhc-C--CChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEcccccccccccccc
Q 022597 64 QVISVTPPLYDYILRN-V--REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSI 140 (294)
Q Consensus 64 ~~~~l~~~l~~Y~~~~-~--~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~ 140 (294)
+.+.+++.+++|+.++ . ++++.|.++++.+..+..+.|.+++.+++++..++...++++|||||||+
T Consensus 12 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~---------- 81 (237)
T 3c3y_A 12 TGLLQSEELCQYILRTSVYPREAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFT---------- 81 (237)
T ss_dssp -CCBSCHHHHHHHHHHHTGGGSCHHHHHHHHHHTTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTT----------
T ss_pred cccCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCC----------
Confidence 5577889999999986 2 67899999999988876668899999999999999999999999999999
Q ss_pred ccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcC-CCCceeEEEEcCC
Q 022597 141 LSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAE 219 (294)
Q Consensus 141 ~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~-~~~~fD~vfiD~~ 219 (294)
|++++++++.++++++|+++|+++++++.|+++++++|+.++++++.+|+.+.++.+...+ ..++||+||+|++
T Consensus 82 -----G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~ 156 (237)
T 3c3y_A 82 -----GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD 156 (237)
T ss_dssp -----SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC
T ss_pred -----CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc
Confidence 9999999999987899999999999999999999999998899999999999887765433 2478999999999
Q ss_pred ccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCc-----chHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 220 KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDA-----KTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 220 ~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~-----~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
+..|..+++.+.++|+|||++++||++|+|.+.++...+. ....+++|++.+.++|+++++++|++||+++++|+
T Consensus 157 ~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 157 KPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp GGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 9999999999999999999999999999999987743332 24588899999999999999999999999999996
No 4
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=4.6e-35 Score=261.30 Aligned_cols=226 Identities=42% Similarity=0.791 Sum_probs=198.5
Q ss_pred cccccccccccccCCChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEcccccc
Q 022597 54 SAHDEKYSNKQVISVTPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVC 132 (294)
Q Consensus 54 ~~~~~~~~~~~~~~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~ 132 (294)
.||---++.+....+++.+++|+.+. ..+++.+.++++.+.....+.|.++|.+++++..++...++++|||||||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~-- 83 (232)
T 3cbg_A 6 HHHHHGSMGKGITGFDPSLYSYLQSISADDSFYLAQLRRETAHLPGAPMQISPEQAQFLGLLISLTGAKQVLEIGVFR-- 83 (232)
T ss_dssp ---------CCBTTSCHHHHHHHHHTSCCCCHHHHHHHHHTTTSTTGGGSCCHHHHHHHHHHHHHHTCCEEEEECCTT--
T ss_pred ccccccccccccccchHHHHHHHHHhCCCCCHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHhcCCCEEEEecCCC--
Confidence 45555677788888999999999998 567899999999887766666789999999999999999999999999999
Q ss_pred ccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCcee
Q 022597 133 VSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 212 (294)
Q Consensus 133 ~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD 212 (294)
|+++++++..++++++|+++|+++++++.|+++++.+|+.++++++.+|+.+.++.+......++||
T Consensus 84 -------------G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 84 -------------GYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp -------------SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred -------------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 9999999999877789999999999999999999999998899999999988877664321127899
Q ss_pred EEEEcCCccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEE
Q 022597 213 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQ 292 (294)
Q Consensus 213 ~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~ 292 (294)
+||+|+++..|..+++.+.++|+|||+++++|++|.|.+.++...++.+..+++|++.+.++|++.++++|++||+++++
T Consensus 151 ~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~ 230 (232)
T 3cbg_A 151 LIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPLGDGMTLAL 230 (232)
T ss_dssp EEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEEEE
Confidence 99999999999999999999999999999999999999998877778889999999999999999999999999999999
Q ss_pred EC
Q 022597 293 KR 294 (294)
Q Consensus 293 k~ 294 (294)
||
T Consensus 231 ~~ 232 (232)
T 3cbg_A 231 KK 232 (232)
T ss_dssp EC
T ss_pred eC
Confidence 96
No 5
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=2.7e-35 Score=266.43 Aligned_cols=217 Identities=39% Similarity=0.670 Sum_probs=194.9
Q ss_pred ccccCCChhHHHHHHhc---CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccc
Q 022597 63 KQVISVTPPLYDYILRN---VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTS 139 (294)
Q Consensus 63 ~~~~~l~~~l~~Y~~~~---~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~ 139 (294)
.+.+.+++.+++|+.++ .++++.|+++++.+..+..+.|.++|.+++++..++...++++|||||||+
T Consensus 20 ~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~--------- 90 (247)
T 1sui_A 20 HKSLLQSDALYQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYT--------- 90 (247)
T ss_dssp -CCSBSCHHHHHHHHHHHTSSSCTTHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGG---------
T ss_pred cccCCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCc---------
Confidence 35677899999999986 277899999999998876668899999999999999999999999999999
Q ss_pred cccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcC-CCCceeEEEEcC
Q 022597 140 ILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDA 218 (294)
Q Consensus 140 ~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~-~~~~fD~vfiD~ 218 (294)
|+++++++..++++++|+++|+++++++.|+++++++|+.++++++.+|+.+.++.+...+ ..++||+||+|+
T Consensus 91 ------G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~ 164 (247)
T 1sui_A 91 ------GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDA 164 (247)
T ss_dssp ------GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECS
T ss_pred ------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcC
Confidence 9999999999987899999999999999999999999998899999999998877653221 136899999999
Q ss_pred CccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcc------hHHHHHHHHHhhhCCCeEEEEeecCCceEEEE
Q 022597 219 EKRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAK------TISIRNFNKNLMEDERVSISMVPIGDGMTICQ 292 (294)
Q Consensus 219 ~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~------~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~ 292 (294)
++..|..+++.+.++|+|||++++||++|+|.+.++...++. +.++++|++.+.+++++.++++|++||+++++
T Consensus 165 ~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~l~~ 244 (247)
T 1sui_A 165 DKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICR 244 (247)
T ss_dssp CSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHTCTTBCCEEECSTTCEEEEC
T ss_pred chHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhhCCCeEEEEEecCCccEEEE
Confidence 999999999999999999999999999999999887654433 44899999999999999999999999999999
Q ss_pred EC
Q 022597 293 KR 294 (294)
Q Consensus 293 k~ 294 (294)
|+
T Consensus 245 k~ 246 (247)
T 1sui_A 245 RI 246 (247)
T ss_dssp BC
T ss_pred Ec
Confidence 86
No 6
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=1e-33 Score=248.47 Aligned_cols=216 Identities=43% Similarity=0.788 Sum_probs=196.8
Q ss_pred cccCCChhHHHHHHhc-CCChHHHHHHHHHHH-cCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccc
Q 022597 64 QVISVTPPLYDYILRN-VREPEILRQLREETA-GMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSIL 141 (294)
Q Consensus 64 ~~~~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~-~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~ 141 (294)
..+.+++.+.+|+.++ ..+++.++++++.+. .+..+.+.+++.+++++..++...++++|||+|||+
T Consensus 7 ~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~----------- 75 (225)
T 3tr6_A 7 NTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFT----------- 75 (225)
T ss_dssp CSCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTT-----------
T ss_pred CCCCCCHHHHHHHHHhcCCCCHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcc-----------
Confidence 4566889999999997 456889999998877 666667889999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc
Q 022597 142 SLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR 221 (294)
Q Consensus 142 ~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~ 221 (294)
|+.+++++..++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+...+..++||+||+|++..
T Consensus 76 ----G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~ 151 (225)
T 3tr6_A 76 ----GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKA 151 (225)
T ss_dssp ----SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSCGG
T ss_pred ----hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCCHH
Confidence 9999999999877899999999999999999999999999899999999988877664322227899999999999
Q ss_pred chHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 222 MYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 222 ~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
.+..+++.+.++|+|||+++++|++|+|.+.++...++.+.++++|++.+.++|+++++++|+|||+++++||
T Consensus 152 ~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 152 NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 9999999999999999999999999999999888777788899999999999999999999999999999996
No 7
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=100.00 E-value=3.7e-33 Score=245.49 Aligned_cols=213 Identities=38% Similarity=0.648 Sum_probs=194.0
Q ss_pred CCChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCC
Q 022597 67 SVTPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFS 145 (294)
Q Consensus 67 ~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~a 145 (294)
.+.+.+++|+.++ ..+++.++++++.+.......+.+++.+++++..++...++++|||+|||+
T Consensus 16 ~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~--------------- 80 (229)
T 2avd_A 16 PEDSRLWQYLLSRSMREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFT--------------- 80 (229)
T ss_dssp CTTSHHHHHHHHTTCCCCHHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTT---------------
T ss_pred hhHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCc---------------
Confidence 3677889999998 567899999999988766667899999999999999999999999999999
Q ss_pred cHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHH
Q 022597 146 GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQE 225 (294)
Q Consensus 146 G~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~ 225 (294)
|+++++++..++++++|+++|+++++++.|+++++.+|+.++++++.+|+.+.++.+...+..++||+||+|+++..|..
T Consensus 81 G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~ 160 (229)
T 2avd_A 81 GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSA 160 (229)
T ss_dssp SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCSTTHHH
T ss_pred cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHHHHHH
Confidence 99999999988767899999999999999999999999988999999999888776643222268999999999999999
Q ss_pred HHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 226 YFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 226 ~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
+++.+.++|+|||+++++|++|+|.+.++...++.+..+++|++.+.++|+++++++|++||+++++|+
T Consensus 161 ~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 161 YYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 999999999999999999999999999887777888899999999999999999999999999999996
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=1.9e-32 Score=240.42 Aligned_cols=209 Identities=31% Similarity=0.508 Sum_probs=191.5
Q ss_pred hhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHH
Q 022597 70 PPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYS 148 (294)
Q Consensus 70 ~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~ 148 (294)
+.+.+|+.++ ..+++.++++++.+.....+.|.+++.+++++..++...++++|||||||+ |++
T Consensus 8 ~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~---------------G~~ 72 (223)
T 3duw_A 8 TAVDQYVSDVLIPKDSTLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQIQGARNILEIGTLG---------------GYS 72 (223)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHTTCCSCSCCHHHHHHHHHHHHHHTCSEEEEECCTT---------------SHH
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhCCCEEEEecCCc---------------cHH
Confidence 4577899887 567899999999988877777889999999999999999999999999999 999
Q ss_pred HHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHH
Q 022597 149 SLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFE 228 (294)
Q Consensus 149 sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~ 228 (294)
+++++..++++++|+++|+++++++.|++++++.|+.++++++.+|+.+.++.+...+ .++||+||+|+.+..+..+++
T Consensus 73 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~~fD~v~~d~~~~~~~~~l~ 151 (223)
T 3duw_A 73 TIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK-YEPFDFIFIDADKQNNPAYFE 151 (223)
T ss_dssp HHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT-CCCCSEEEECSCGGGHHHHHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC-CCCcCEEEEcCCcHHHHHHHH
Confidence 9999999887889999999999999999999999999899999999998877664321 267999999999999999999
Q ss_pred HHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeec-----CCceEEEEEC
Q 022597 229 LLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPI-----GDGMTICQKR 294 (294)
Q Consensus 229 ~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~-----gdGl~i~~k~ 294 (294)
.+.++|+|||+++++|++|+|.+.++...++....+++|++.+..+++++++++|+ +||+.++++|
T Consensus 152 ~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 152 WALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp HHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 99999999999999999999999988877888889999999999999999999999 9999999985
No 9
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=100.00 E-value=1.6e-32 Score=244.66 Aligned_cols=211 Identities=22% Similarity=0.353 Sum_probs=181.9
Q ss_pred ccccccCCChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccc
Q 022597 61 SNKQVISVTPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTS 139 (294)
Q Consensus 61 ~~~~~~~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~ 139 (294)
.......+++.+.+|+.+. ..+++.++++++...... .+.+.+.+++++..++...++++|||||||+
T Consensus 14 ~~~~~~~~~~~l~~yl~~~~~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~--------- 82 (232)
T 3ntv_A 14 LVPRGSHMDDLNKKYLIDLHQHQNSSIEVLREFAEVNE--VPIVDRLTLDLIKQLIRMNNVKNILEIGTAI--------- 82 (232)
T ss_dssp -------CHHHHHHHHHHHHGGGCCGGGGHHHHHHHTT--CCCCCHHHHHHHHHHHHHHTCCEEEEECCSS---------
T ss_pred cccCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHhhcCCCEEEEEeCch---------
Confidence 3335566889999999987 445677878887766543 3457899999999999999999999999999
Q ss_pred cccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH-HHhhcCCCCceeEEEEcC
Q 022597 140 ILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK-ALILNGEASSYDFAFVDA 218 (294)
Q Consensus 140 ~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~-~l~~~~~~~~fD~vfiD~ 218 (294)
|+++++++...+ +++|+++|+++++++.|+++++..|+.++++++.+|+.+.++ .+ .++||+||+|+
T Consensus 83 ------G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~fD~V~~~~ 150 (232)
T 3ntv_A 83 ------GYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN-----DKVYDMIFIDA 150 (232)
T ss_dssp ------SHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT-----TSCEEEEEEET
T ss_pred ------hHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc-----cCCccEEEEcC
Confidence 999999999655 789999999999999999999999998899999999998877 55 57899999999
Q ss_pred CccchHHHHHHHHhcccCCeEEEEecccCCCcccCccc-CCc----chHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 022597 219 EKRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMV-NDA----KTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 293 (294)
Q Consensus 219 ~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~-~~~----~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k 293 (294)
++..+..+++.+.++|+|||++++||++|+|.+.++.. .++ ...++++|++.+.++|+++++++|+|||++|++|
T Consensus 151 ~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~i~~k 230 (232)
T 3ntv_A 151 AKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIK 230 (232)
T ss_dssp TSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECSTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEcCCceEEEEE
Confidence 99999999999999999999999999999999988754 222 2458999999999999999999999999999999
Q ss_pred C
Q 022597 294 R 294 (294)
Q Consensus 294 ~ 294 (294)
|
T Consensus 231 ~ 231 (232)
T 3ntv_A 231 G 231 (232)
T ss_dssp C
T ss_pred C
Confidence 7
No 10
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1e-31 Score=242.14 Aligned_cols=207 Identities=29% Similarity=0.509 Sum_probs=188.0
Q ss_pred hhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHH
Q 022597 70 PPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYS 148 (294)
Q Consensus 70 ~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~ 148 (294)
+.+.+|+.+. ..+++.++++++.+.....+.+.+++.+++++..++...++++|||||||+ |++
T Consensus 13 ~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~---------------G~~ 77 (248)
T 3tfw_A 13 SAVDNYLIKALIPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLG---------------GYS 77 (248)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHHHHTCSEEEEECCTT---------------SHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHhhcCCCEEEEecCCc---------------hHH
Confidence 4567899876 556889999998887776667789999999999999999999999999999 999
Q ss_pred HHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHH
Q 022597 149 SLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFE 228 (294)
Q Consensus 149 sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~ 228 (294)
+++++..++++++|+++|+++++++.|+++++++|+.++++++.+|+.+.++.+. ..++||+||+|+++..+..+++
T Consensus 78 ~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~---~~~~fD~V~~d~~~~~~~~~l~ 154 (248)
T 3tfw_A 78 TIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG---ECPAFDLIFIDADKPNNPHYLR 154 (248)
T ss_dssp HHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC---SCCCCSEEEECSCGGGHHHHHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC---CCCCeEEEEECCchHHHHHHHH
Confidence 9999999887899999999999999999999999999899999999988776541 1358999999999999999999
Q ss_pred HHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEe-ecC----CceEEEEEC
Q 022597 229 LLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMV-PIG----DGMTICQKR 294 (294)
Q Consensus 229 ~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~l-p~g----dGl~i~~k~ 294 (294)
.+.++|+|||+++++|++|.|.+.++...++.+..+++|++.+.++|+++++++ |+| ||+.|+++|
T Consensus 155 ~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 155 WALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp HHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEEC
T ss_pred HHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEe
Confidence 999999999999999999999999888778888899999999999999999998 776 999999986
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=100.00 E-value=6.8e-31 Score=234.12 Aligned_cols=216 Identities=43% Similarity=0.759 Sum_probs=192.3
Q ss_pred cccCCChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEcccccccccccccccc
Q 022597 64 QVISVTPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILS 142 (294)
Q Consensus 64 ~~~~l~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~ 142 (294)
..+.+++.+++|+.++ .++++.+.++++.+.....+++.+.|.+++++..++...++++|||||||+
T Consensus 4 ~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~------------ 71 (239)
T 2hnk_A 4 KNISLTESLEEYIFRNSVREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKISGAKRIIEIGTFT------------ 71 (239)
T ss_dssp CSCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHHHTCSEEEEECCTT------------
T ss_pred ccccchHHHHHHHHHccCCCCHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHhhCcCEEEEEeCCC------------
Confidence 3466788999999997 567899999999988877777899999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhc---------CCC--Cce
Q 022597 143 LFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN---------GEA--SSY 211 (294)
Q Consensus 143 ~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~---------~~~--~~f 211 (294)
|+.+..++..++++++|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+... .+. ++|
T Consensus 72 ---G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~f 148 (239)
T 2hnk_A 72 ---GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSI 148 (239)
T ss_dssp ---CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCE
T ss_pred ---CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCc
Confidence 999999999987678999999999999999999999999888999999998876654321 011 689
Q ss_pred eEEEEcCCccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEE
Q 022597 212 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTIC 291 (294)
Q Consensus 212 D~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~ 291 (294)
|+||++.....+..+++.+.++|+|||++++++++|.|.+.++...+..+..+++|++.+..++++.++++|++||+.++
T Consensus 149 D~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~ 228 (239)
T 2hnk_A 149 DLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLV 228 (239)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEEcCCceEee
Confidence 99999999999999999999999999999999999999998887666777899999999999999999999999999999
Q ss_pred EEC
Q 022597 292 QKR 294 (294)
Q Consensus 292 ~k~ 294 (294)
+|+
T Consensus 229 ~~~ 231 (239)
T 2hnk_A 229 RKR 231 (239)
T ss_dssp EEC
T ss_pred eeh
Confidence 986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.97 E-value=1.9e-30 Score=226.38 Aligned_cols=203 Identities=19% Similarity=0.278 Sum_probs=173.7
Q ss_pred CChhHHHHHHhcC-CChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCc
Q 022597 68 VTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSG 146 (294)
Q Consensus 68 l~~~l~~Y~~~~~-~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG 146 (294)
..+.+++|+.++. .+++.+.++++.+.... .+.+++.+++++..++...++++|||||||+ |
T Consensus 6 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~---------------G 68 (210)
T 3c3p_A 6 VDSRIGAYLDGLLPEADPVVAAMEQIARERN--IPIVDRQTGRLLYLLARIKQPQLVVVPGDGL---------------G 68 (210)
T ss_dssp BCHHHHHHHHHTSCSCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHHCCSEEEEESCGG---------------G
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHHhhCCCEEEEEcCCc---------------c
Confidence 5678899999984 56788999998877653 3568999999999999989999999999999 9
Q ss_pred HHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHH
Q 022597 147 YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEY 226 (294)
Q Consensus 147 ~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~ 226 (294)
+++++++..++++++|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+ .+ ||+||+|..+..+..+
T Consensus 69 ~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~-fD~v~~~~~~~~~~~~ 142 (210)
T 3c3p_A 69 CASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-----RD-IDILFMDCDVFNGADV 142 (210)
T ss_dssp HHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-----CS-EEEEEEETTTSCHHHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-----CC-CCEEEEcCChhhhHHH
Confidence 99999999887689999999999999999999999999889999999998765543 35 9999999988899999
Q ss_pred HHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 227 FELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 227 ~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
++.+.++|+|||+++++|++|.|.+.++ ..++....+++|++.+.++|++.++++|++||+.+++|+
T Consensus 143 l~~~~~~LkpgG~lv~~~~~~~g~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 143 LERMNRCLAKNALLIAVNALRRGSVAES-HEDPETAALREFNHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp HHHHGGGEEEEEEEEEESSSSCC-------------CCCHHHHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHhcCCCeEEEEECccccCcccCc-ccchHHHHHHHHHHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 9999999999999999999999998865 455566688999999999999999999999999999986
No 13
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.96 E-value=2e-27 Score=210.35 Aligned_cols=206 Identities=27% Similarity=0.483 Sum_probs=166.1
Q ss_pred CChhHHHHHHhcC-CChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCc
Q 022597 68 VTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSG 146 (294)
Q Consensus 68 l~~~l~~Y~~~~~-~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG 146 (294)
+++.+++|+.++. .+++.+.++++.+.... .+.+.|..++++..++...++.+|||+|||+ |
T Consensus 4 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~---------------G 66 (233)
T 2gpy_A 4 IEERLKHYLEKQIPARDQYIEQMEREAHEQQ--VPIMDLLGMESLLHLLKMAAPARILEIGTAI---------------G 66 (233)
T ss_dssp -CHHHHHHHHTTCCCCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHHCCSEEEEECCTT---------------S
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHhccCCCEEEEecCCC---------------c
Confidence 6778999999984 46889999988876543 3468999999999999999999999999999 9
Q ss_pred HHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHH
Q 022597 147 YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEY 226 (294)
Q Consensus 147 ~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~ 226 (294)
+.+..++...+ +++|+++|+++++++.|+++++..|+.++++++.+|+.+.++... ..++||+||++.....+..+
T Consensus 67 ~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~~fD~I~~~~~~~~~~~~ 142 (233)
T 2gpy_A 67 YSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE---LYPLFDVLFIDAAKGQYRRF 142 (233)
T ss_dssp HHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT---TSCCEEEEEEEGGGSCHHHH
T ss_pred HHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc---cCCCccEEEECCCHHHHHHH
Confidence 99999999986 789999999999999999999999998889999999988766542 13689999999988889999
Q ss_pred HHHHHhcccCCeEEEEecccCCCcccCccc----CCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 227 FELLLQLIRVGGIIVIDNVLWHGKVADQMV----NDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 227 ~~~~~~lLkpgG~ivid~vl~~g~v~~~~~----~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
++.+.++|+|||+++++|++|.|.+.++.. .......+++|++.+.+++++.++++|++||+.+++|+
T Consensus 143 l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 143 FDMYSPMVRPGGLILSDNVLFRGLVAETDIEHKRHKQLATKIDTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp HHHHGGGEEEEEEEEEETTTC-------------------------CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHHcCCCeEEEEEcCCcCCccCCccccccchhHHHHHHHHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 999999999999999999999998865532 11223578899999999999999999999999999985
No 14
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.95 E-value=4.8e-27 Score=206.85 Aligned_cols=194 Identities=21% Similarity=0.355 Sum_probs=165.7
Q ss_pred hhHHHHHHhcCC--C-hHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCc
Q 022597 70 PPLYDYILRNVR--E-PEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSG 146 (294)
Q Consensus 70 ~~l~~Y~~~~~~--~-~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG 146 (294)
..+++|+.++.. + +++++.+++..... ...+.++|..++++..++...++++|||||||+ |
T Consensus 7 ~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~---------------G 70 (221)
T 3u81_A 7 QRILRYVQQNAKPGDPQSVLEAIDTYCTQK-EWAMNVGDAKGQIMDAVIREYSPSLVLELGAYC---------------G 70 (221)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-TCGGGCCHHHHHHHHHHHHHHCCSEEEEECCTT---------------S
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhhhc-CcCcccCHHHHHHHHHHHHhcCCCEEEEECCCC---------------C
Confidence 468899998843 2 35778887776544 345789999999999999999999999999999 9
Q ss_pred HHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHH
Q 022597 147 YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEY 226 (294)
Q Consensus 147 ~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~ 226 (294)
++++++++.++++++|+++|+++++++.|+++++.+|+.++++++.+|+.+.++.+......++||+||+|+....|...
T Consensus 71 ~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~ 150 (221)
T 3u81_A 71 YSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPD 150 (221)
T ss_dssp HHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHH
T ss_pred HHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHH
Confidence 99999999887789999999999999999999999999989999999998876654221122689999999988777754
Q ss_pred ---HHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEee-------cCCceEEEEEC
Q 022597 227 ---FELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVP-------IGDGMTICQKR 294 (294)
Q Consensus 227 ---~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp-------~gdGl~i~~k~ 294 (294)
++.+ ++|+|||+++++|+.|+|. ++|++.+.++|+++++++| ++||+.+++++
T Consensus 151 ~~~~~~~-~~LkpgG~lv~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 151 TLLLEKC-GLLRKGTVLLADNVIVPGT--------------PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp HHHHHHT-TCCCTTCEEEESCCCCCCC--------------HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred HHHHHhc-cccCCCeEEEEeCCCCcch--------------HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 4444 9999999999999998773 6889999999999999999 89999999875
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.80 E-value=5.8e-19 Score=156.41 Aligned_cols=149 Identities=16% Similarity=0.115 Sum_probs=116.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 98 ~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
.+.+.++++++++|.. .+.++++|||+|| ||||+++++. + +++|++||.|+++.+.|++
T Consensus 11 ~P~~~v~~~~~~~L~~--~l~~a~~VLEiGt-----------------GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~ 69 (202)
T 3cvo_A 11 RPELTMPPAEAEALRM--AYEEAEVILEYGS-----------------GGSTVVAAEL-P-GKHVTSVESDRAWARMMKA 69 (202)
T ss_dssp CCCCCSCHHHHHHHHH--HHHHCSEEEEESC-----------------SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHH--HhhCCCEEEEECc-----------------hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHH
Confidence 4567899999999988 5568999999997 9999999984 4 7999999999999999999
Q ss_pred HHHHhCC--CCcEEEEEcchhhh--------------HHHHh----hcCCCCceeEEEEcCCccchHHHHHHHHhcccCC
Q 022597 178 YYERAGV--SHKVKIKHGLAADS--------------LKALI----LNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG 237 (294)
Q Consensus 178 ~~~~~gl--~~~v~~~~gda~~~--------------l~~l~----~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg 237 (294)
+++++|+ .++|+++.||+.+. ++.+. .....++||+||+|+.++ ..++..+.++|+||
T Consensus 70 ~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~G 147 (202)
T 3cvo_A 70 WLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRP 147 (202)
T ss_dssp HHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSC
T ss_pred HHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCC
Confidence 9999999 88999999997543 22221 111247899999999876 47788889999999
Q ss_pred eEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEE
Q 022597 238 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSI 279 (294)
Q Consensus 238 G~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~ 279 (294)
|+|++||+++.+.- ..+.+|.+.+...++...
T Consensus 148 G~Iv~DNv~~r~~y----------~~v~~~~~~~~~~~~~a~ 179 (202)
T 3cvo_A 148 VTLLFDDYSQRRWQ----------HQVEEFLGAPLMIGRLAA 179 (202)
T ss_dssp EEEEETTGGGCSSG----------GGGHHHHCCCEEETTEEE
T ss_pred eEEEEeCCcCCcch----------HHHHHHHhHHhhcCceEE
Confidence 99999998655431 123566655555555433
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.73 E-value=8e-18 Score=156.03 Aligned_cols=158 Identities=13% Similarity=0.193 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHhhh----CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC----CCcEEEEEeCChH----
Q 022597 103 VSPDQAQLLAMLVQIL----GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP----ESGCLVACERDAR---- 170 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~----~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~----~~~~v~~id~~~~---- 170 (294)
+++....+|..+++.. .+++|||+||++ |+++++++..++ ++++|+++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~---------------G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~ 150 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWR---------------GGACILMRGILRAHDVRDRTVWVADSFQGIPDV 150 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTT---------------SHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCC
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCc---------------hHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcc
Confidence 5678888888888763 488999999999 999999998874 3789999996421
Q ss_pred ----------------------HHHHHHHHHHHhCCC-CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-cchHHH
Q 022597 171 ----------------------SLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEY 226 (294)
Q Consensus 171 ----------------------~~~~A~~~~~~~gl~-~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-~~~~~~ 226 (294)
..+.++++++++|+. ++|+++.|++.+.++.+. .++||+||+|+++ ..+..+
T Consensus 151 ~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~----~~~~d~vfIDaD~y~~~~~~ 226 (282)
T 2wk1_A 151 GEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP----IDTLAVLRMDGDLYESTWDT 226 (282)
T ss_dssp CTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC----CCCEEEEEECCCSHHHHHHH
T ss_pred cccccccccccccccccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC----CCCEEEEEEcCCccccHHHH
Confidence 367899999999994 899999999998877642 4689999999997 457899
Q ss_pred HHHHHhcccCCeEEEEecccC-CCcccCcccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 022597 227 FELLLQLIRVGGIIVIDNVLW-HGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 293 (294)
Q Consensus 227 ~~~~~~lLkpgG~ivid~vl~-~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k 293 (294)
|+.+.++|+|||+|++||+.| .| .+.++++|++. .++...+++++.+...-||
T Consensus 227 Le~~~p~L~pGGiIv~DD~~~~~G----------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 227 LTNLYPKVSVGGYVIVDDYMMCPP----------CKDAVDEYRAK----FDIADELITIDRDGVYWQR 280 (282)
T ss_dssp HHHHGGGEEEEEEEEESSCTTCHH----------HHHHHHHHHHH----TTCCSCCEECSSSCEEEEC
T ss_pred HHHHHhhcCCCEEEEEcCCCCCHH----------HHHHHHHHHHh----cCCceEEEEecCEEEEEEe
Confidence 999999999999999999964 22 35688888754 3466678888877666665
No 17
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.72 E-value=1.3e-17 Score=153.69 Aligned_cols=181 Identities=9% Similarity=0.026 Sum_probs=121.4
Q ss_pred chhhHHhhcccccccccCccccccccccccccccccccccCCChhHHHHHHhcC-CChHHHHHHHHHHHcCCCCCCCCCH
Q 022597 27 FPLSERLRLRPCKFKTKNQFTTNCCVSSAHDEKYSNKQVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSP 105 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Y~~~~~-~~~~~L~~~~~~~~~~~~~~~~v~~ 105 (294)
..+..+++...-+|...|....+..++.+|||..+..+..++++.. .|.+.+. .+++.++++++......
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~-~y~~~~~~~~~~~l~~~~~~~~~~~-------- 82 (318)
T 2fk8_A 12 SGLVPRGSHMAEKPISPTKTRTRFEDIQAHYDVSDDFFALFQDPTR-TYSCAYFEPPELTLEEAQYAKVDLN-------- 82 (318)
T ss_dssp --------------------------CGGGGCCCHHHHTTTSCTTC-CCSCCCCSSTTCCHHHHHHHHHHHH--------
T ss_pred hhHHHHHHHHhhhhcccCChhhhHHHHHHhcCCCHHHHHHHcCCCC-CcceeeeCCCCCCHHHHHHHHHHHH--------
Confidence 3333444333344557788888999999999999888888888875 6766653 34455555554432211
Q ss_pred HHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 106 DQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 106 ~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
...+...++.+|||||||+ |..+..++... +.+|+++|+++++++.|+++++..|+.
T Consensus 83 ------~~~~~~~~~~~vLDiGcG~---------------G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~ 139 (318)
T 2fk8_A 83 ------LDKLDLKPGMTLLDIGCGW---------------GTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTN 139 (318)
T ss_dssp ------HTTSCCCTTCEEEEESCTT---------------SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred ------HHhcCCCCcCEEEEEcccc---------------hHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 1111223456999999999 99999999876 469999999999999999999999998
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDA-----EKRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~-----~~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
++++++.+|+.+. .++||+|+... +..+...+++.+.++|+|||.+++......
T Consensus 140 ~~v~~~~~d~~~~---------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 140 RSRQVLLQGWEDF---------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp SCEEEEESCGGGC---------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred CceEEEECChHHC---------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 8999999998654 37899998763 336788999999999999999999877543
No 18
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.71 E-value=5e-18 Score=155.56 Aligned_cols=162 Identities=9% Similarity=0.090 Sum_probs=129.5
Q ss_pred cccccccccccccccccccccCCChhHHHHHHhcC-CChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEE
Q 022597 46 FTTNCCVSSAHDEKYSNKQVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCI 124 (294)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Y~~~~~-~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vL 124 (294)
..+...|+++|||..+..|..++++.+ .|.+.+. .+++.+++++...... +...+...++.+||
T Consensus 13 ~~~~~~~i~~~Yd~~~~~y~~~l~~~~-~y~~~~~~~~~~~l~~a~~~~~~~--------------~~~~~~~~~~~~vL 77 (302)
T 3hem_A 13 LKPPVEAVRSHYDKSNEFFKLWLDPSM-TYSCAYFERPDMTLEEAQYAKRKL--------------ALDKLNLEPGMTLL 77 (302)
T ss_dssp CCCCHHHHHHHHTSCHHHHHHHSCTTC-CCSCCCCSSTTCCHHHHHHHHHHH--------------HHHTTCCCTTCEEE
T ss_pred ccchHHHHHHhcCCCHHHHHHhcCCCC-ceeeEEecCCCCCHHHHHHHHHHH--------------HHHHcCCCCcCEEE
Confidence 445688999999999999999999887 7887763 3455666665543221 11112234566999
Q ss_pred EEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhh
Q 022597 125 EVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 204 (294)
Q Consensus 125 EiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~ 204 (294)
|||||+ |..+..++...+ .+|+++|+++++++.|+++++..|+.++++++.+|+.+.
T Consensus 78 DiGcG~---------------G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------ 134 (302)
T 3hem_A 78 DIGCGW---------------GSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------ 134 (302)
T ss_dssp EETCTT---------------SHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC------
T ss_pred EeeccC---------------cHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc------
Confidence 999999 999999999864 799999999999999999999999998999999999764
Q ss_pred cCCCCceeEEEEcC------------CccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 205 NGEASSYDFAFVDA------------EKRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 205 ~~~~~~fD~vfiD~------------~~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
.++||+|+... +...+..+++.+.++|+|||.+++..+...
T Consensus 135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 47899998753 224568999999999999999999887544
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.69 E-value=5.4e-17 Score=147.01 Aligned_cols=163 Identities=10% Similarity=0.093 Sum_probs=127.0
Q ss_pred ccccccccccccccccccccccCCChhHHHHHHhcC-CChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeE
Q 022597 45 QFTTNCCVSSAHDEKYSNKQVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRC 123 (294)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Y~~~~~-~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~v 123 (294)
....+..|+++|||..+..+..++++.+ .|.+.+. .+.+.++++++..... +...+...++.+|
T Consensus 4 ~~~~~~~~i~~~Yd~~~~~~~~~~~~~~-~y~~~~~~~~~~~l~~a~~~~~~~--------------~~~~~~~~~~~~v 68 (287)
T 1kpg_A 4 ELKPHFANVQAHYDLSDDFFRLFLDPTQ-TYSCAYFERDDMTLQEAQIAKIDL--------------ALGKLGLQPGMTL 68 (287)
T ss_dssp CSCCCHHHHHHHHTSCHHHHTTTSCTTC-CCSCCCCSSTTCCHHHHHHHHHHH--------------HHTTTTCCTTCEE
T ss_pred cccccHHHHHHhcCCCHHHHHHhcCCCC-CcceEEecCCCCCHHHHHHHHHHH--------------HHHHcCCCCcCEE
Confidence 3446788999999999998999898875 7777663 3455566665543221 1111123355699
Q ss_pred EEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHh
Q 022597 124 IEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 203 (294)
Q Consensus 124 LEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~ 203 (294)
||||||+ |..+..++...+ .+|+++|+++++++.|+++++..|+.++++++.+|+.+.
T Consensus 69 LDiGcG~---------------G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----- 126 (287)
T 1kpg_A 69 LDVGCGW---------------GATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----- 126 (287)
T ss_dssp EEETCTT---------------SHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC-----
T ss_pred EEECCcc---------------cHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC-----
Confidence 9999999 999999996653 699999999999999999999999988999999998653
Q ss_pred hcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 204 LNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 204 ~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
.++||+|+.... ..++..+++.+.++|+|||.+++......
T Consensus 127 ----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 ----DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ----CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ----CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 378999987532 35678999999999999999999887543
No 20
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.64 E-value=5.5e-16 Score=145.28 Aligned_cols=149 Identities=23% Similarity=0.360 Sum_probs=114.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CC-CCcEEEEEcc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl-~~~v~~~~gd 194 (294)
.++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|++++... |+ .++++++.+|
T Consensus 107 ~~~~~VLdIG~G~---------------G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D 170 (314)
T 2b2c_A 107 PDPKRVLIIGGGD---------------GGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD 170 (314)
T ss_dssp SSCCEEEEESCTT---------------SHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC
T ss_pred CCCCEEEEEcCCc---------------CHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh
Confidence 3567999999999 99999998854 3689999999999999999998764 44 5689999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCc------cch-HHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHHH
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEK------RMY-QEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNF 267 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~------~~~-~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~f 267 (294)
+.+.++.. .++||+||+|... ..| .++++.+.+.|+|||++++++- .. .........+.++
T Consensus 171 ~~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~----~~---~~~~~~~~~~~~~ 238 (314)
T 2b2c_A 171 GFEFLKNH-----KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE----SV---WLHLPLIAHLVAF 238 (314)
T ss_dssp HHHHHHHC-----TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC----CT---TTCHHHHHHHHHH
T ss_pred HHHHHHhc-----CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC----Cc---ccCHHHHHHHHHH
Confidence 98876642 5789999998742 223 7899999999999999999862 11 1122334567788
Q ss_pred HHHhhhCCCeEEEEeec---CC-ceEEEEEC
Q 022597 268 NKNLMEDERVSISMVPI---GD-GMTICQKR 294 (294)
Q Consensus 268 ~~~l~~~~~~~~~~lp~---gd-Gl~i~~k~ 294 (294)
++.+..+.++..+.+|+ |+ |++++.|+
T Consensus 239 l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 239 NRKIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 88887777888888998 45 88888763
No 21
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.63 E-value=1.1e-15 Score=142.37 Aligned_cols=147 Identities=18% Similarity=0.336 Sum_probs=116.7
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH--hCC-CCcEEEEEcc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~--~gl-~~~v~~~~gd 194 (294)
.++++|||||||+ |..+..+++.. +..+|++||+|+++++.|++++.. .++ .++++++.+|
T Consensus 94 ~~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~D 157 (304)
T 2o07_A 94 PNPRKVLIIGGGD---------------GGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD 157 (304)
T ss_dssp SSCCEEEEEECTT---------------SHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred CCCCEEEEECCCc---------------hHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 3567999999999 99999998764 368999999999999999999876 455 5689999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCcc-------chHHHHHHHHhcccCCeEEEEecc-cCCCcccCcccCCcchHHHHH
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVIDNV-LWHGKVADQMVNDAKTISIRN 266 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~-------~~~~~~~~~~~lLkpgG~ivid~v-l~~g~v~~~~~~~~~~~~ir~ 266 (294)
+.+.++.. .++||+||+|.... .+.++++.+.++|+|||++++++. .|.. ......+++
T Consensus 158 a~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--------~~~~~~~~~ 224 (304)
T 2o07_A 158 GFEFMKQN-----QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--------LDLIKEMRQ 224 (304)
T ss_dssp HHHHHHTC-----SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--------HHHHHHHHH
T ss_pred HHHHHhhC-----CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--------hHHHHHHHH
Confidence 98876542 57899999997632 246789999999999999999873 3432 123456788
Q ss_pred HHHHhhhCCCeEEEEeecC----CceEEEEE
Q 022597 267 FNKNLMEDERVSISMVPIG----DGMTICQK 293 (294)
Q Consensus 267 f~~~l~~~~~~~~~~lp~g----dGl~i~~k 293 (294)
+++.+..+.++..+.+|.. .|+++|.|
T Consensus 225 ~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 225 FCQSLFPVVAYAYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp HHHHHCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHHHhCCCceeEEEEeccccCcceEEEEEeC
Confidence 8888888888888889983 47888875
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=3.2e-14 Score=121.43 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=90.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++.++.. ...+|+++|+|+++++.|+++++.+++ ++++++++|+.+
T Consensus 43 ~~~~~vLDlgcG~---------------G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 104 (189)
T 3p9n_A 43 LTGLAVLDLYAGS---------------GALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAA 104 (189)
T ss_dssp CTTCEEEEETCTT---------------CHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHH
T ss_pred CCCCEEEEeCCCc---------------CHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHH
Confidence 4677999999999 9999987763 256899999999999999999999998 689999999988
Q ss_pred hHHHHhhcCCCCceeEEEEcCCc----cchHHHHHHHHh--cccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAEK----RMYQEYFELLLQ--LIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~----~~~~~~~~~~~~--lLkpgG~ivid~v 245 (294)
..+.+. .++||+|+++++. ..+.+.++.+.+ +|+|||++++...
T Consensus 105 ~~~~~~----~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 105 VVAAGT----TSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHCC----SSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHhhcc----CCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 765431 4789999999763 347788888888 9999999999765
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.59 E-value=1e-14 Score=126.84 Aligned_cols=164 Identities=15% Similarity=0.187 Sum_probs=122.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.+...+.+...+...++.+|||+|||+ |..+..++...+ ..+++++|+++++++.|+++++.
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~---------------G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 75 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQ---------------GNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDR 75 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTT---------------CHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCC---------------CHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHH
Confidence 45666667777777777889999999999 999999988654 57999999999999999999998
Q ss_pred hCCCC----cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc-----C
Q 022597 182 AGVSH----KVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL-----W 247 (294)
Q Consensus 182 ~gl~~----~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl-----~ 247 (294)
.++.+ +++++.+|+..... ..++||+|+.... .+....+++.+.+.|+|||++++.... |
T Consensus 76 ~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~ 149 (217)
T 3jwh_A 76 LRLPRNQWERLQLIQGALTYQDK------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKF 149 (217)
T ss_dssp CCCCHHHHTTEEEEECCTTSCCG------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHT
T ss_pred hcCCcccCcceEEEeCCcccccc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhh
Confidence 88775 89999999743211 1368999997643 335678999999999999988875432 1
Q ss_pred CCc----ccCccc-CCcchHHHHHHHHHhhhCCCeEEEEeecCCc
Q 022597 248 HGK----VADQMV-NDAKTISIRNFNKNLMEDERVSISMVPIGDG 287 (294)
Q Consensus 248 ~g~----v~~~~~-~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdG 287 (294)
.+. ...+.. .......++++.+.+.+..+++++..++|+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 150 ANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp C-----------CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred cccccccccccccccccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 111 000110 1123456777788888888999999998875
No 24
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.59 E-value=2.2e-15 Score=134.91 Aligned_cols=116 Identities=16% Similarity=0.296 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHH---CCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 105 PDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALV---LPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 105 ~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~---~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
|+.+.++..++...++.+|||||||+ |+++..++.. +.++++|+++|+++++++.|+
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~Gt---------------G~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----- 126 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYN---------------GGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----- 126 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTT---------------SHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCC---------------CHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----
Confidence 88888888888888899999999999 9999999997 445799999999999998887
Q ss_pred hCCCCcEEEEEcchhhh--HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHh-cccCCeEEEEecc
Q 022597 182 AGVSHKVKIKHGLAADS--LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQ-LIRVGGIIVIDNV 245 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~--l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~-lLkpgG~ivid~v 245 (294)
++.++++++++|+.+. ++.+ ...+||+|++|..+..+..+++.+.+ .|+|||+++++++
T Consensus 127 -~~~~~v~~~~gD~~~~~~l~~~----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 127 -SDMENITLHQGDCSDLTTFEHL----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp -GGCTTEEEEECCSSCSGGGGGG----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred -ccCCceEEEECcchhHHHHHhh----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 2346899999999764 3322 12479999999887788999999996 9999999999987
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=1.4e-14 Score=125.80 Aligned_cols=164 Identities=14% Similarity=0.110 Sum_probs=120.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.+...+.+..++...++.+|||+|||+ |..+..++...+ ..+++++|+++++++.|+++++.
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~---------------G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~ 75 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKSVNAKKVIDLGCGE---------------GNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKI 75 (219)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTT---------------CHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTG
T ss_pred cchHHHHHHHHHHHhhcCCCEEEEecCCC---------------CHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHh
Confidence 35566666677777777889999999999 999999988654 57999999999999999999998
Q ss_pred hCCCC----cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCCccc
Q 022597 182 AGVSH----KVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVA 252 (294)
Q Consensus 182 ~gl~~----~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~ 252 (294)
.++.+ +++++.+|+..... ..++||+|+.... .+....+++.+.+.|+|||+++.......+...
T Consensus 76 ~~~~~~~~~~v~~~~~d~~~~~~------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~ 149 (219)
T 3jwg_A 76 DRLPEMQRKRISLFQSSLVYRDK------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHY 149 (219)
T ss_dssp GGSCHHHHTTEEEEECCSSSCCG------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCC
T ss_pred hccccccCcceEEEeCccccccc------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhh
Confidence 88765 89999999843211 1478999987543 234568999999999999988764332221111
Q ss_pred C---------ccc-CCcchHHHHHHHHHhhhCCCeEEEEeecCCc
Q 022597 253 D---------QMV-NDAKTISIRNFNKNLMEDERVSISMVPIGDG 287 (294)
Q Consensus 253 ~---------~~~-~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdG 287 (294)
. +.. .......++++.+.+.+..++++...++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 150 GNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp CCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred cccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 0 000 0113346777777777777899999988876
No 26
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=1.5e-14 Score=124.69 Aligned_cols=120 Identities=16% Similarity=0.284 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..++....+...+...++.+|||+|||+ |..++.++...+ .++|+++|+++++++.|+++++..
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~---------------G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~ 87 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGS---------------ASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKF 87 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTT---------------CHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCC---------------CHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHh
Confidence 4455545555555666778999999999 999999999865 789999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|+ ++++++.+|+.+.++. .++||+||++.....+..+++.+.+.|+|||.+++...
T Consensus 88 ~~-~~v~~~~~d~~~~~~~------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 88 VA-RNVTLVEAFAPEGLDD------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TC-TTEEEEECCTTTTCTT------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CC-CcEEEEeCChhhhhhc------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 98 6799999999765432 36799999998766889999999999999999999765
No 27
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.58 E-value=4.5e-15 Score=132.93 Aligned_cols=160 Identities=13% Similarity=0.138 Sum_probs=103.4
Q ss_pred ccccccccccccccccccCCChhHHHHHHhcCCC-h--HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCCCeEEE
Q 022597 49 NCCVSSAHDEKYSNKQVISVTPPLYDYILRNVRE-P--EILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIE 125 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~l~~~l~~Y~~~~~~~-~--~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~~~vLE 125 (294)
+..++.+|||..+..|..++++.+ +| .+... + ..+.++++... +.+...+...++.+|||
T Consensus 5 ~~~~~~~~Yd~~~~~y~~~~~~~~-~~--~y~~~~~~~~~~~~~~~~~~--------------~~l~~~~~~~~~~~vLD 67 (273)
T 3bus_A 5 TPEEVRQMYDDFTDPFARIWGENL-HF--GYWEDAGADVSVDDATDRLT--------------DEMIALLDVRSGDRVLD 67 (273)
T ss_dssp ------------------CCGGGC-CC--CCCCCSSCCCCHHHHHHHHH--------------HHHHHHSCCCTTCEEEE
T ss_pred cHHHHHHHHcchHHHHHHHcCCCc-eE--EecCCCccccCHHHHHHHHH--------------HHHHHhcCCCCCCEEEE
Confidence 456789999999988888887764 22 33221 1 23333322211 11122223345679999
Q ss_pred EccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhc
Q 022597 126 VGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 205 (294)
Q Consensus 126 iG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~ 205 (294)
||||+ |..+..++... +++|+++|+++++++.|+++++..|+.++++++.+|+.+..
T Consensus 68 iGcG~---------------G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------ 124 (273)
T 3bus_A 68 VGCGI---------------GKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP------ 124 (273)
T ss_dssp ESCTT---------------SHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------
T ss_pred eCCCC---------------CHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC------
Confidence 99999 99999999875 58999999999999999999999999889999999987631
Q ss_pred CCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 206 GEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 206 ~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
.+.++||+|+.... ..+...+++.+.+.|+|||.+++.+..+.
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 12478999987543 34568999999999999999999887544
No 28
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.58 E-value=2e-14 Score=131.90 Aligned_cols=145 Identities=16% Similarity=0.173 Sum_probs=109.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CC--------CCc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV--------SHK 187 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl--------~~~ 187 (294)
.++++|||||||+ |..+..+++. + ..+|+++|+|+++++.|++++ .. ++ .++
T Consensus 74 ~~~~~VLdiG~G~---------------G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~ 135 (281)
T 1mjf_A 74 PKPKRVLVIGGGD---------------GGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEK 135 (281)
T ss_dssp SCCCEEEEEECTT---------------SHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSS
T ss_pred CCCCeEEEEcCCc---------------CHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCc
Confidence 3567999999999 9999999886 4 689999999999999999998 44 43 468
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----cc--hHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcc
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----RM--YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAK 260 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----~~--~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~ 260 (294)
++++.+|+.+.++. .++||+|++|... .. ..++++.+.+.|+|||++++... . +......
T Consensus 136 v~~~~~D~~~~l~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~----~---~~~~~~~ 202 (281)
T 1mjf_A 136 AKLTIGDGFEFIKN------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG----S---VYLFTDE 202 (281)
T ss_dssp EEEEESCHHHHHHH------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE----E---TTTSHHH
T ss_pred EEEEECchHHHhcc------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC----C---cccCHHH
Confidence 99999999877654 3689999999752 11 47899999999999999998732 1 1111223
Q ss_pred hHHHHHHHHHhhhCCCeEEEEeecCCc---eEEEEE
Q 022597 261 TISIRNFNKNLMEDERVSISMVPIGDG---MTICQK 293 (294)
Q Consensus 261 ~~~ir~f~~~l~~~~~~~~~~lp~gdG---l~i~~k 293 (294)
...+.++++.+..+..+..+.+|.++| +.++.|
T Consensus 203 ~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 203 LISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVK 238 (281)
T ss_dssp HHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEE
T ss_pred HHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeC
Confidence 345556666655555666778898876 677766
No 29
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.57 E-value=1.6e-14 Score=134.86 Aligned_cols=149 Identities=15% Similarity=0.139 Sum_probs=111.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH--hC-C-CCcEEEEEc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AG-V-SHKVKIKHG 193 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~--~g-l-~~~v~~~~g 193 (294)
.++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|++++.. .| + .++++++.+
T Consensus 76 ~~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~ 139 (314)
T 1uir_A 76 PEPKRVLIVGGGE---------------GATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID 139 (314)
T ss_dssp SCCCEEEEEECTT---------------SHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred CCCCeEEEEcCCc---------------CHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc
Confidence 4667999999999 99999998854 367999999999999999999875 23 3 468999999
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccc----------hHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHH
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRM----------YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTIS 263 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~----------~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ 263 (294)
|+.+.++.. .++||+|++|..... ..++++.+.+.|+|||++++... .... ........
T Consensus 140 D~~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~~--~~~~~~~~ 208 (314)
T 1uir_A 140 DARAYLERT-----EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG----MILL--THHRVHPV 208 (314)
T ss_dssp CHHHHHHHC-----CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE----EECC-----CHHHH
T ss_pred hHHHHHHhc-----CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc----Cccc--cCHHHHHH
Confidence 998876553 578999999975432 57999999999999999998532 1110 11123345
Q ss_pred HHHHHHHhhhCCCeEEEEeecCCc---eEEEEE
Q 022597 264 IRNFNKNLMEDERVSISMVPIGDG---MTICQK 293 (294)
Q Consensus 264 ir~f~~~l~~~~~~~~~~lp~gdG---l~i~~k 293 (294)
+.+.++.+..+..+..+.+|.++| +.+|.|
T Consensus 209 ~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 209 VHRTVREAFRYVRSYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp HHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEES
T ss_pred HHHHHHHHCCceEEEEEecCCCCCeEEEEEEEC
Confidence 555665555555667788999877 466654
No 30
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.57 E-value=3.6e-14 Score=123.91 Aligned_cols=118 Identities=18% Similarity=0.213 Sum_probs=98.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
...+.....+...+...++.+|||+|||+ |..++.+++. +++|+++|+++++++.|+++++.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~---------------G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~ 99 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGS---------------GSVSVEWCLA---GGRAITIEPRADRIENIQKNIDT 99 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTT---------------CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCC---------------CHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHH
Confidence 44555555555566666778999999999 9999999986 68999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.|+.++++++.+|+.+.++. .++||+||++... ... +++.+.+.|+|||.+++..+
T Consensus 100 ~g~~~~v~~~~~d~~~~~~~------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 100 YGLSPRMRAVQGTAPAALAD------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp TTCTTTEEEEESCTTGGGTT------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred cCCCCCEEEEeCchhhhccc------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEec
Confidence 99987899999999875432 3579999998744 344 99999999999999999766
No 31
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=1.8e-14 Score=121.24 Aligned_cols=107 Identities=13% Similarity=0.196 Sum_probs=91.3
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||+|||+ |..++.++.. + ..+|+++|+++++++.|+++++..|+.++++++.+|+.
T Consensus 29 ~~~~~~vLDlGcG~---------------G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 91 (177)
T 2esr_A 29 YFNGGRVLDLFAGS---------------GGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE 91 (177)
T ss_dssp CCCSCEEEEETCTT---------------CHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH
T ss_pred hcCCCeEEEeCCCC---------------CHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHH
Confidence 44678999999999 9999998876 2 57999999999999999999999998888999999998
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHH--hcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLL--QLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~--~lLkpgG~ivid~v 245 (294)
+.++.. .++||+|+.+++ ...+.+.++.+. +.|+|||++++...
T Consensus 92 ~~~~~~-----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 92 RAIDCL-----TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHHB-----CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HhHHhh-----cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 866543 467999999976 345677777887 89999999998755
No 32
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.56 E-value=2.6e-14 Score=133.32 Aligned_cols=107 Identities=15% Similarity=0.140 Sum_probs=92.7
Q ss_pred HHHhhhCCCeEEEEccccccccccccccccCCCcH-HHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEE
Q 022597 113 MLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGY-SSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK 191 (294)
Q Consensus 113 ~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~-~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~ 191 (294)
.++++.++.+|||||||+ |. +++.+++ .+ +++|+++|+++++++.|++++++.|+ ++++++
T Consensus 116 ~la~l~~g~rVLDIGcG~---------------G~~ta~~lA~-~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v 177 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGP---------------LPLTGILLSH-VY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVI 177 (298)
T ss_dssp HHTTCCTTCEEEEECCCS---------------SCHHHHHHHH-TT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEE
T ss_pred HHcCCCCcCEEEEECCCc---------------cHHHHHHHHH-cc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEE
Confidence 356778889999999999 64 4455555 33 78999999999999999999999999 799999
Q ss_pred EcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 192 HGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 192 ~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
++|+.+. + .++||+||+++..+++.++++.+.+.|||||.+++.+.
T Consensus 178 ~gDa~~l-~-------d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 178 TGDETVI-D-------GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ESCGGGG-G-------GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ECchhhC-C-------CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9999874 1 47899999988888899999999999999999999874
No 33
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=7.3e-15 Score=131.05 Aligned_cols=111 Identities=17% Similarity=0.179 Sum_probs=90.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |.++.++++..+ .++|+||+++++++.|+++.+..+. +++++.+|+.+.
T Consensus 60 ~G~rVLdiG~G~---------------G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~ 120 (236)
T 3orh_A 60 KGGRVLEVGFGM---------------AIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTT---------------SHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHH
T ss_pred CCCeEEEECCCc---------------cHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhh
Confidence 456999999999 999999887643 6899999999999999999887664 689999999876
Q ss_pred HHHHhhcCCCCceeEEEEcCCc--------cchHHHHHHHHhcccCCeEEEEecccCCCccc
Q 022597 199 LKALILNGEASSYDFAFVDAEK--------RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVA 252 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~--------~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~ 252 (294)
+..+ +.++||.|+.|... .+...+++.+.++|||||++++.|....|...
T Consensus 121 ~~~~----~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~ 178 (236)
T 3orh_A 121 APTL----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELM 178 (236)
T ss_dssp GGGS----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHT
T ss_pred cccc----cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhh
Confidence 5544 25789999998642 24578899999999999999998876555433
No 34
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.54 E-value=3e-14 Score=119.07 Aligned_cols=115 Identities=17% Similarity=0.156 Sum_probs=94.1
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
...+.......++.+|||+|||+ |..+..++...+ +++|+++|+++++++.|+++++..|+.++
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 77 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGS---------------GSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDR 77 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTT---------------THHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTS
T ss_pred HHHHHHHhcccCCCeEEEeCCCC---------------CHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCC
Confidence 33444444555667999999999 999999998875 78999999999999999999999999878
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+ ++.+|+.+.++.. .++||+|++...... ..+++.+.+.|+|||.+++...
T Consensus 78 ~-~~~~d~~~~~~~~-----~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 78 I-AVQQGAPRAFDDV-----PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp E-EEECCTTGGGGGC-----CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred E-EEecchHhhhhcc-----CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 9 8889986654321 378999998876444 7889999999999999998765
No 35
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.54 E-value=8.9e-14 Score=117.07 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=90.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++.++.. ...+|+++|+++++++.|+++++..++.++++++++|+.+
T Consensus 43 ~~~~~vLD~GcG~---------------G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 43 FDGGMALDLYSGS---------------GGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CSSCEEEETTCTT---------------CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCCCCEEEeCCcc---------------CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 3567999999999 9999988773 2579999999999999999999999988889999999988
Q ss_pred hHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHH--HhcccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE--KRMYQEYFELL--LQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~--~~lLkpgG~ivid~v 245 (294)
.++.+... .++||+|+.+++ .......++.+ .++|+|||++++...
T Consensus 106 ~~~~~~~~--~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 106 ALEQFYEE--KLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp HHHHHHHT--TCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHHHhc--CCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 76544221 468999999976 34567777777 788999999998654
No 36
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.53 E-value=9.3e-14 Score=126.47 Aligned_cols=115 Identities=13% Similarity=0.258 Sum_probs=94.0
Q ss_pred HHHHHHHh--hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 109 QLLAMLVQ--ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 109 ~lL~~l~~--~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
+++..++. ..++.+|||+|||+ |..++.+++..+ ++++|+|+|+++++++.|+++++..+..
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGt---------------G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~ 122 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSL---------------GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP 122 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTT---------------THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCC---------------CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC
Confidence 34444443 33567999999999 999999999874 4679999999999999999999999998
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+++++++|+.+. +.++||+|++... ......+++.+.+.|+|||.+++.+..
T Consensus 123 ~~v~~~~~D~~~~--------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 123 TPVDVIEGDIRDI--------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp SCEEEEESCTTTC--------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ceEEEeecccccc--------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 8999999998764 1467999987543 344567899999999999999986653
No 37
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.52 E-value=7.2e-14 Score=121.37 Aligned_cols=108 Identities=15% Similarity=0.187 Sum_probs=88.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC-CcEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~-~~v~~~~gda~ 196 (294)
.++.+|||+|||+ |..++.++... ..+|+++|+|+++++.|+++++..|+. ++++++.+|+.
T Consensus 52 ~~~~~vLDlGcGt---------------G~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~ 114 (201)
T 2ift_A 52 IHQSECLDGFAGS---------------GSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSL 114 (201)
T ss_dssp HTTCEEEETTCTT---------------CHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHH
T ss_pred cCCCeEEEcCCcc---------------CHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHH
Confidence 3677999999999 99999866642 368999999999999999999999985 67999999997
Q ss_pred hhHHHHhhcCCCCc-eeEEEEcCC--ccchHHHHHHH--HhcccCCeEEEEeccc
Q 022597 197 DSLKALILNGEASS-YDFAFVDAE--KRMYQEYFELL--LQLIRVGGIIVIDNVL 246 (294)
Q Consensus 197 ~~l~~l~~~~~~~~-fD~vfiD~~--~~~~~~~~~~~--~~lLkpgG~ivid~vl 246 (294)
+.++.+ ..++ ||+|++|++ ...+.+.++.+ .++|+|||++++...-
T Consensus 115 ~~~~~~----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 115 DFLKQP----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp HHTTSC----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred HHHHhh----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 754321 1367 999999987 45577888888 5689999999987653
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.52 E-value=2.1e-13 Score=115.42 Aligned_cols=132 Identities=13% Similarity=0.155 Sum_probs=94.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..++.++.. +++|+++|+++++++.|+++++..|+ +++++++++..+.
T Consensus 22 ~~~~vLDiGcG~---------------G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l 82 (185)
T 3mti_A 22 DESIVVDATMGN---------------GNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENL 82 (185)
T ss_dssp TTCEEEESCCTT---------------SHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGG
T ss_pred CCCEEEEEcCCC---------------CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHH
Confidence 567999999999 9999999876 68999999999999999999999998 6799999777553
Q ss_pred HHHHhhcCCCCceeEEEEcCC------------ccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHHH
Q 022597 199 LKALILNGEASSYDFAFVDAE------------KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRN 266 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~------------~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir~ 266 (294)
.... .++||+|+.+.+ .......++.+.+.|+|||.+++. .|.|... .......+.+
T Consensus 83 ~~~~-----~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~--~~~~~~~----~~~~~~~~~~ 151 (185)
T 3mti_A 83 DHYV-----REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM--IYYGHDG----GDMEKDAVLE 151 (185)
T ss_dssp GGTC-----CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE--EC----------CHHHHHHHH
T ss_pred Hhhc-----cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE--EeCCCCC----CHHHHHHHHH
Confidence 2111 578999998731 234557789999999999999885 3444311 1122345566
Q ss_pred HHHHhhhCCCeEEEE
Q 022597 267 FNKNLMEDERVSISM 281 (294)
Q Consensus 267 f~~~l~~~~~~~~~~ 281 (294)
+.+.+.. ..+....
T Consensus 152 ~~~~l~~-~~~~~~~ 165 (185)
T 3mti_A 152 YVIGLDQ-RVFTAML 165 (185)
T ss_dssp HHHHSCT-TTEEEEE
T ss_pred HHHhCCC-ceEEEEE
Confidence 6655533 2355433
No 39
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=8.4e-14 Score=123.82 Aligned_cols=118 Identities=22% Similarity=0.274 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+.|.....+...+...++.+|||+|||+ |..+..++..+.++++++++|+++++++.|+++++..
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~---------------G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 141 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGS---------------GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA 141 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCc---------------hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc
Confidence 5566666777777777888999999999 9999999998655899999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.++++++.+|+.+.++ .++||+|++|.+ ....+++.+.+.|+|||.+++..
T Consensus 142 ~~~~~v~~~~~d~~~~~~-------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 142 GFDDRVTIKLKDIYEGIE-------EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp TCTTTEEEECSCGGGCCC-------CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceEEEECchhhccC-------CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 998889999999986421 568999999875 33578899999999999999864
No 40
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.51 E-value=8.1e-14 Score=123.47 Aligned_cols=111 Identities=14% Similarity=0.258 Sum_probs=93.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++.+|||+|||+ |..+..++...+ ++|+++|+++++++.|+++++..|+.++++++.+|+
T Consensus 43 ~~~~~~~vLDiG~G~---------------G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 43 ELTDDAKIADIGCGT---------------GGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp CCCTTCEEEEETCTT---------------SHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred cCCCCCeEEEeCCCC---------------CHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 444567999999999 999999999875 499999999999999999999999998999999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
.+.. + ..++||+|+.... .-+...+++.+.++|+|||.+++.+..|..
T Consensus 106 ~~~~--~----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 106 DNLP--F----QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp TSCS--S----CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred hhCC--C----CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 6542 1 2579999987643 225788999999999999999998876544
No 41
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.51 E-value=3e-13 Score=113.35 Aligned_cols=119 Identities=20% Similarity=0.308 Sum_probs=100.0
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..+.....+...+...++.+|||+|||+ |..+..++... .+++++|+++++++.++++++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~---------------G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~ 78 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGT---------------GGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRH 78 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTT---------------SHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCC---------------CHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHc
Confidence 4455555666666667778999999999 99999988764 79999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|+.+++++..+|+.+.++. .++||+|+.+........+++.+.+.|+|||.+++...
T Consensus 79 ~~~~~~~~~~~d~~~~~~~------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 79 GLGDNVTLMEGDAPEALCK------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp TCCTTEEEEESCHHHHHTT------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCcceEEEecCHHHhccc------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9877899999998764321 25899999988767789999999999999999998654
No 42
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.50 E-value=2e-13 Score=120.79 Aligned_cols=123 Identities=21% Similarity=0.223 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..+.....+...+...++.+|||||||+ |..+..++... +.+|+++|+++++++.|+++++..
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~---------------G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~ 82 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGS---------------GEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEEL 82 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTT---------------CHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCC---------------CHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhc
Confidence 4455545555555566778999999999 99999999886 479999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
|+.++++++.+|+.+... .++||+|+.... ..+...+++.+.+.|+|||.+++.+..|..
T Consensus 83 ~~~~~v~~~~~d~~~~~~-------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 83 GVSERVHFIHNDAAGYVA-------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQ 145 (256)
T ss_dssp TCTTTEEEEESCCTTCCC-------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETT
T ss_pred CCCcceEEEECChHhCCc-------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccC
Confidence 998899999999976421 478999997433 235688999999999999999997765543
No 43
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.50 E-value=9.2e-14 Score=118.75 Aligned_cols=108 Identities=11% Similarity=0.158 Sum_probs=91.4
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||+|||+ |..+..++...++.++|+++|+++++++.|+++++..|+.++++++.+|+.
T Consensus 20 ~~~~~~vLDlGcG~---------------G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 84 (197)
T 3eey_A 20 VKEGDTVVDATCGN---------------GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQ 84 (197)
T ss_dssp CCTTCEEEESCCTT---------------SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGG
T ss_pred CCCCCEEEEcCCCC---------------CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 34567999999999 999999999875568999999999999999999999999888999999987
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEec
Q 022597 197 DSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..... .++||+|+.+.+. ..+.++++.+.++|+|||.+++..
T Consensus 85 ~~~~~~-----~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 85 NMDKYI-----DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp GGGGTC-----CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhhhc-----cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 653322 5789999987531 245679999999999999999864
No 44
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=1.5e-13 Score=119.40 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=86.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++.++... ..+|+++|+++++++.|+++++..|+ ++++++++|+.+
T Consensus 53 ~~~~~vLDlgcG~---------------G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~ 114 (202)
T 2fpo_A 53 IVDAQCLDCFAGS---------------GALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMS 114 (202)
T ss_dssp HTTCEEEETTCTT---------------CHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHH
T ss_pred cCCCeEEEeCCCc---------------CHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHH
Confidence 3677999999999 99999877653 35999999999999999999999998 579999999987
Q ss_pred hHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHh--cccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQ--LIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~--lLkpgG~ivid~v 245 (294)
.++. ..++||+||+|++ ...+.+.++.+.+ +|+|||++++...
T Consensus 115 ~~~~-----~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 115 FLAQ-----KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHSS-----CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhh-----cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 5532 1468999999976 4456778888865 5999999998654
No 45
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=3e-13 Score=120.10 Aligned_cols=105 Identities=20% Similarity=0.226 Sum_probs=88.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++.++...+ +++|+++|+++++++.|+++++..|+. +++++++|+.+
T Consensus 69 ~~~~~vLDiG~G~---------------G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 131 (240)
T 1xdz_A 69 NQVNTICDVGAGA---------------GFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAET 131 (240)
T ss_dssp GGCCEEEEECSSS---------------CTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHH
T ss_pred CCCCEEEEecCCC---------------CHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHH
Confidence 3678999999999 999999998655 789999999999999999999999987 49999999976
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
..... ...++||+|++.. ...+..+++.+.++|+|||.+++.
T Consensus 132 ~~~~~---~~~~~fD~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 132 FGQRK---DVRESYDIVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HTTCT---TTTTCEEEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcccc---cccCCccEEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 42100 0136899999987 466889999999999999999874
No 46
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=1.5e-13 Score=117.76 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=89.5
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 201 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~ 201 (294)
+|||+|||+ |..+..++.. + +.+++++|+++++++.|+++++..++.++++++.+|+.+..
T Consensus 46 ~vLdiG~G~---------------G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 106 (219)
T 3dlc_A 46 TCIDIGSGP---------------GALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-- 106 (219)
T ss_dssp EEEEETCTT---------------SHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--
T ss_pred EEEEECCCC---------------CHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--
Confidence 999999999 9999999987 3 68999999999999999999999999889999999997632
Q ss_pred HhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 202 LILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 202 l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
+ ..++||+|+.... ..+...+++.+.+.|+|||.+++.+....
T Consensus 107 ~----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 107 I----EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp S----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred C----CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 1 2578999998754 34568899999999999999999765443
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=9.9e-14 Score=124.39 Aligned_cols=110 Identities=12% Similarity=0.234 Sum_probs=93.4
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.++.+|||||||+ |..+..++.. ++++|+++|+++.+++.|+++++..|+.++++++.+|+.
T Consensus 44 ~~~~~~vLDiGcG~---------------G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 44 LTEKSLIADIGCGT---------------GGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD 106 (267)
T ss_dssp CCTTCEEEEETCTT---------------CHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCEEEEeCCCC---------------CHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh
Confidence 45678999999999 9999999987 367999999999999999999999999989999999996
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
+.. + ..++||+|+.... .-+...+++.+.++|+|||.+++.+..|..
T Consensus 107 ~~~--~----~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 155 (267)
T 3kkz_A 107 DLP--F----RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFT 155 (267)
T ss_dssp SCC--C----CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESS
T ss_pred hCC--C----CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeecC
Confidence 642 1 2578999998654 225788999999999999999998876543
No 48
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.49 E-value=2e-14 Score=132.41 Aligned_cols=166 Identities=13% Similarity=0.102 Sum_probs=116.3
Q ss_pred cCccccccccc-cccccccccccccCCChh-HHHHHHhcCCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhhhCC
Q 022597 43 KNQFTTNCCVS-SAHDEKYSNKQVISVTPP-LYDYILRNVREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGA 120 (294)
Q Consensus 43 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-l~~Y~~~~~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~~l~~~~~~ 120 (294)
.|.......|+ .+|||.....+..+.++. . .|......+...+++.+.. .++..+....++
T Consensus 56 ~~~~~g~~~~i~~~~y~~~~~~~~~~~~~~~~-~y~~~~f~~~~~~~~~~~~----------------~l~~~l~~~~~~ 118 (312)
T 3vc1_A 56 VNLRLGDVDGLYHHHYGIGPVDRAALGDPEHS-EYEKKVIAELHRLESAQAE----------------FLMDHLGQAGPD 118 (312)
T ss_dssp HHHHHHTTTTCCCCSCCCSCCCHHHHCCTTST-THHHHHHHHHHHHHHHHHH----------------HHHTTSCCCCTT
T ss_pred chhhcccccchhhhhcCCchhHHHhhcCCCcc-ccchHHHhhhhhHHHHHHH----------------HHHHHhccCCCC
Confidence 34444556677 899998776555444443 3 4554432222222222211 111111113456
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
.+|||+|||+ |..+..++... +++|+++|+++++++.|+++++..|+.++++++.+|+.+..
T Consensus 119 ~~vLDiGcG~---------------G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 180 (312)
T 3vc1_A 119 DTLVDAGCGR---------------GGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP- 180 (312)
T ss_dssp CEEEEESCTT---------------SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-
T ss_pred CEEEEecCCC---------------CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-
Confidence 7999999999 99999999875 47999999999999999999999999989999999997631
Q ss_pred HHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 201 ALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
+ ..++||+|+.... .-+...+++.+.+.|+|||.+++.+....
T Consensus 181 -~----~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 181 -F----DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp -C----CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -C----CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 1 2479999987532 12378999999999999999998765433
No 49
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.49 E-value=1e-13 Score=127.01 Aligned_cols=105 Identities=15% Similarity=0.220 Sum_probs=87.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CC-CCcEEEEEcch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl-~~~v~~~~gda 195 (294)
++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|++++... ++ .++++++.+|+
T Consensus 75 ~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~ 138 (275)
T 1iy9_A 75 NPEHVLVVGGGD---------------GGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG 138 (275)
T ss_dssp SCCEEEEESCTT---------------CHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS
T ss_pred CCCEEEEECCch---------------HHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 567999999999 99999888753 3689999999999999999998752 44 46899999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccc-------hHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~-------~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.++.. .++||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 139 ~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 139 FMHIAKS-----ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp HHHHHTC-----CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhC-----CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8876542 578999999975321 2689999999999999999874
No 50
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.49 E-value=1.3e-13 Score=130.20 Aligned_cols=113 Identities=21% Similarity=0.365 Sum_probs=92.6
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CC-CCcEEEEEcc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl-~~~v~~~~gd 194 (294)
.++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|++++... |+ ..+++++.+|
T Consensus 119 ~~~~~VLdIG~G~---------------G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D 182 (334)
T 1xj5_A 119 PNPKKVLVIGGGD---------------GGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD 182 (334)
T ss_dssp SCCCEEEEETCSS---------------SHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC
T ss_pred CCCCEEEEECCCc---------------cHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECC
Confidence 4667999999999 99999998864 3689999999999999999998763 55 4589999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCc----cc---hHHHHHHHHhcccCCeEEEEe-cccCCCc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEK----RM---YQEYFELLLQLIRVGGIIVID-NVLWHGK 250 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~----~~---~~~~~~~~~~lLkpgG~ivid-~vl~~g~ 250 (294)
+.+.++.+ ..++||+|++|... .. +.++++.+.++|+|||+++++ +..|.+.
T Consensus 183 ~~~~l~~~----~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 242 (334)
T 1xj5_A 183 GVAFLKNA----AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHM 242 (334)
T ss_dssp HHHHHHTS----CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCH
T ss_pred HHHHHHhc----cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccH
Confidence 98876543 14689999998641 11 589999999999999999997 6666653
No 51
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.48 E-value=1e-13 Score=124.59 Aligned_cols=120 Identities=16% Similarity=0.158 Sum_probs=98.7
Q ss_pred CCCCHHHHHHHHHHHhhh-CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQIL-GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~-~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
+..+.+ +.+|..++... ++.+|||+|||+ |..++.++...+ ++|+++|+++++++.|++++
T Consensus 31 ~~~~~d-~~ll~~~~~~~~~~~~vLDlG~G~---------------G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~ 92 (259)
T 3lpm_A 31 FSFSID-AVLLAKFSYLPIRKGKIIDLCSGN---------------GIIPLLLSTRTK--AKIVGVEIQERLADMAKRSV 92 (259)
T ss_dssp BCCCHH-HHHHHHHCCCCSSCCEEEETTCTT---------------THHHHHHHTTCC--CEEEEECCSHHHHHHHHHHH
T ss_pred ccCcHH-HHHHHHHhcCCCCCCEEEEcCCch---------------hHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHH
Confidence 344444 56677777766 788999999999 999999988743 49999999999999999999
Q ss_pred HHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----------------------cchHHHHHHHHhcccC
Q 022597 180 ERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----------------------RMYQEYFELLLQLIRV 236 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----------------------~~~~~~~~~~~~lLkp 236 (294)
+.+++.++++++++|+.+....+ ..++||+|+.+++- ..+..+++.+.++|+|
T Consensus 93 ~~~~~~~~v~~~~~D~~~~~~~~----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp 168 (259)
T 3lpm_A 93 AYNQLEDQIEIIEYDLKKITDLI----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ 168 (259)
T ss_dssp HHTTCTTTEEEECSCGGGGGGTS----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEE
T ss_pred HHCCCcccEEEEECcHHHhhhhh----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC
Confidence 99999999999999998764322 14789999997541 1246789999999999
Q ss_pred CeEEEE
Q 022597 237 GGIIVI 242 (294)
Q Consensus 237 gG~ivi 242 (294)
||.+++
T Consensus 169 gG~l~~ 174 (259)
T 3lpm_A 169 GGKANF 174 (259)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 999998
No 52
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.47 E-value=4.3e-13 Score=118.69 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=88.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
.+.+|||||||+ |..++.++...| +..|+|||+++++++.|+++++..|+.+ ++++.+|+.+.
T Consensus 34 ~~~~vLDiGcG~---------------G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~ 96 (218)
T 3dxy_A 34 EAPVTLEIGFGM---------------GASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEV 96 (218)
T ss_dssp CCCEEEEESCTT---------------CHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHH
T ss_pred CCCeEEEEeeeC---------------hHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHH
Confidence 567999999999 999999999876 7899999999999999999999999874 99999999987
Q ss_pred HHHHhhcCCCCceeEEEEc---CCc--cc------hHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVD---AEK--RM------YQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD---~~~--~~------~~~~~~~~~~lLkpgG~ivid 243 (294)
++... ..++||.|++. ++. .. ...+++.+.+.|+|||++++.
T Consensus 97 l~~~~---~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 97 LHKMI---PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp HHHHS---CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHc---CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 66532 25799999885 321 11 236999999999999999874
No 53
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.47 E-value=1.2e-12 Score=119.17 Aligned_cols=123 Identities=16% Similarity=0.192 Sum_probs=100.0
Q ss_pred HHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC
Q 022597 107 QAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH 186 (294)
Q Consensus 107 ~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~ 186 (294)
..+++..++...++.+|||+|||+ |..+..++..++..++|+++|+++++++.+++++++.|+.
T Consensus 71 ~s~l~~~~l~~~~g~~VLDlgaG~---------------G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~- 134 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFILDMCAAP---------------GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL- 134 (274)
T ss_dssp GGGHHHHHHCCCTTCEEEETTCTT---------------CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHhCCCCcCEEEEeCCCc---------------cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-
Confidence 344555566666778999999999 9999999998875589999999999999999999999987
Q ss_pred cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc---------------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 187 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEK---------------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 187 ~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~---------------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++++.+|+.+....+... .++||+|++|++. ..+.++++.+.++|+|||.+++...
T Consensus 135 ~v~~~~~D~~~~~~~~~~~--~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 135 NTIIINADMRKYKDYLLKN--EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp SEEEEESCHHHHHHHHHHT--TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cEEEEeCChHhcchhhhhc--cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 7999999998765432111 3689999999542 2357889999999999999999776
Q ss_pred cC
Q 022597 246 LW 247 (294)
Q Consensus 246 l~ 247 (294)
.+
T Consensus 213 s~ 214 (274)
T 3ajd_A 213 SM 214 (274)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 54
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.46 E-value=1.1e-12 Score=108.51 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=86.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++|||+|||+ |..+..++... .+|+++|+++++++.|+++++..++ +++++++|+.+.
T Consensus 41 ~~~~vLD~GcG~---------------G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 100 (171)
T 1ws6_A 41 RRGRFLDPFAGS---------------GAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVF 100 (171)
T ss_dssp TCCEEEEETCSS---------------CHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHH
T ss_pred CCCeEEEeCCCc---------------CHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHH
Confidence 677999999999 99999998864 3499999999999999999999988 799999999886
Q ss_pred HHHHhhcCCCCceeEEEEcCCc-cchHHHHHHHH--hcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDAEK-RMYQEYFELLL--QLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~-~~~~~~~~~~~--~lLkpgG~ivid~v 245 (294)
++..... .++||+|+.+... ....+.++.+. ++|+|||++++...
T Consensus 101 ~~~~~~~--~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 101 LPEAKAQ--GERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHT--TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHhhhcc--CCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 6554321 2489999998643 45567777777 99999999998654
No 55
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.46 E-value=4.1e-13 Score=112.74 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=88.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC-cEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~-~v~~~~gda~ 196 (294)
.++.+|||+|||+ |..+..++.. +.+++++|+++++++.|+++++..++.+ +++++.+|+.
T Consensus 51 ~~~~~vLdiG~G~---------------G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 51 DKDDDILDLGCGY---------------GVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLY 112 (194)
T ss_dssp CTTCEEEEETCTT---------------SHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred CCCCeEEEeCCCC---------------CHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchh
Confidence 3566999999999 9999988886 5799999999999999999999988875 6999999987
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAE----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.++ .++||+|+++.. ......+++.+.++|+|||.+++...
T Consensus 113 ~~~~-------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 113 ENVK-------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp TTCT-------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccc-------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 6432 468999999875 34567899999999999999998754
No 56
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.46 E-value=2.9e-13 Score=125.28 Aligned_cols=105 Identities=15% Similarity=0.334 Sum_probs=85.8
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH--hCC-CCcEEEEEcch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~--~gl-~~~v~~~~gda 195 (294)
++++|||||||+ |..+..+++..+ ..+|+++|+|+++++.|++++.. .++ .++++++.+|+
T Consensus 90 ~~~~VLdiG~G~---------------G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 90 NPKKVLIIGGGD---------------GGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp SCCEEEEEECTT---------------CHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred CCCEEEEEcCCc---------------CHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 567999999999 999999887643 68999999999999999999875 344 46899999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCcc--------chHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKR--------MYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~--------~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.++.. .++||+|++|.... ...++++.+.+.|+|||++++..
T Consensus 154 ~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 154 AEYVRKF-----KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHGGGC-----SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhC-----CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8765432 47899999987533 34789999999999999999863
No 57
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=1.9e-13 Score=123.68 Aligned_cols=119 Identities=20% Similarity=0.262 Sum_probs=97.1
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH---hCC
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGV 184 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~---~gl 184 (294)
+.+|..++...++.+|||+|||+ |..++.++...+ +.+|+++|+++++++.|+++++. +++
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~---------------G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l 88 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGA---------------GAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAF 88 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSS---------------SHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTT
T ss_pred HHHHHHHhcccCCCEEEEeCChH---------------hHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCC
Confidence 44555555556677999999999 999999999876 68999999999999999999998 899
Q ss_pred CCcEEEEEcchhhhHHHHhh-cCCCCceeEEEEcCCc---------------------cchHHHHHHHHhcccCCeEEEE
Q 022597 185 SHKVKIKHGLAADSLKALIL-NGEASSYDFAFVDAEK---------------------RMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 185 ~~~v~~~~gda~~~l~~l~~-~~~~~~fD~vfiD~~~---------------------~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.++++++++|+.+..+.... ....++||+|+.+++- ..+..+++.+.++|+|||.+++
T Consensus 89 ~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 89 SARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp GGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred cceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 88999999999887543211 1124789999998541 2367889999999999999987
No 58
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=2.7e-12 Score=120.86 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=90.4
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC-cEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~-~v~~~~gda~~ 197 (294)
++.+|||+|||+ |..++.++.. +.+|+++|+|+++++.|+++++.+|+.+ +++++++|+.+
T Consensus 153 ~~~~VLDlgcGt---------------G~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~ 214 (332)
T 2igt_A 153 RPLKVLNLFGYT---------------GVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK 214 (332)
T ss_dssp SCCEEEEETCTT---------------CHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH
T ss_pred CCCcEEEccccc---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHH
Confidence 457999999999 9999999884 4599999999999999999999999986 59999999998
Q ss_pred hHHHHhhcCCCCceeEEEEcCCc-------------cchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAEK-------------RMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~-------------~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.++.+... .++||+|++|++. ..+..+++.+.++|+|||++++....
T Consensus 215 ~l~~~~~~--~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 215 FIQREERR--GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHH--TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHhc--CCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 77654221 3689999999762 23678899999999999998776553
No 59
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.44 E-value=5.2e-13 Score=125.12 Aligned_cols=106 Identities=21% Similarity=0.354 Sum_probs=87.7
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH--hCC-CCcEEEEEcc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~--~gl-~~~v~~~~gd 194 (294)
.++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|+++++. .++ .++++++.+|
T Consensus 115 ~~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D 178 (321)
T 2pt6_A 115 KEPKNVLVVGGGD---------------GGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED 178 (321)
T ss_dssp SSCCEEEEEECTT---------------CHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC
T ss_pred CCCCEEEEEcCCc---------------cHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEcc
Confidence 3567999999999 99999988753 368999999999999999999876 344 4689999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCc------cch-HHHHHHHHhcccCCeEEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEK------RMY-QEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~------~~~-~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.+.++.. .++||+|++|... ..+ .++++.+.+.|+|||++++..
T Consensus 179 ~~~~l~~~-----~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 179 ASKFLENV-----TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHHHHC-----CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhhc-----CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 98876543 5789999998731 113 799999999999999999874
No 60
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.44 E-value=9.8e-13 Score=129.49 Aligned_cols=124 Identities=17% Similarity=0.264 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+....++++..++...++.+|||+|||+ |..++.++..++..++|+++|+++++++.+++++++
T Consensus 84 ~vQd~ss~l~a~~L~~~~g~~VLDlgaGp---------------G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r 148 (464)
T 3m6w_A 84 YIQEPSAQAVGVLLDPKPGERVLDLAAAP---------------GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER 148 (464)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTT---------------CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHhcCcCCCCEEEEEcCCc---------------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 34445566777777777888999999999 999999999988678999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------------------------chHHHHHHHHhcccC
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRV 236 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------------------------~~~~~~~~~~~lLkp 236 (294)
.|+. ++++++|+.+..... .++||+|++|++.. .+.++++.+.++|+|
T Consensus 149 ~G~~--v~~~~~Da~~l~~~~-----~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 149 WGAP--LAVTQAPPRALAEAF-----GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp HCCC--CEEECSCHHHHHHHH-----CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred cCCe--EEEEECCHHHhhhhc-----cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 999999998765434 57899999997621 126788899999999
Q ss_pred CeEEEEecccC
Q 022597 237 GGIIVIDNVLW 247 (294)
Q Consensus 237 gG~ivid~vl~ 247 (294)
||.+++..+.+
T Consensus 222 GG~LvysTCs~ 232 (464)
T 3m6w_A 222 GGVLVYSTCTF 232 (464)
T ss_dssp EEEEEEEESCC
T ss_pred CcEEEEEeccC
Confidence 99999877643
No 61
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=3.7e-12 Score=106.06 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..+.....+...+...++.+|||+|||+ |..+..++. ++.+++++|+++++++.|+++++..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~ 80 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGS---------------GGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKF 80 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCC---------------SHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCC---------------CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHc
Confidence 4455555555555666778999999999 999999988 3789999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|+ ++++++.+|+.+.++ .++||+|+.+.. .....+++.+.++ |||.+++...
T Consensus 81 ~~-~~~~~~~~d~~~~~~-------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 81 NI-KNCQIIKGRAEDVLD-------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp TC-CSEEEEESCHHHHGG-------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CC-CcEEEEECCcccccc-------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 98 469999999976321 368999999887 7788899998888 9999998764
No 62
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.44 E-value=4.2e-13 Score=121.10 Aligned_cols=103 Identities=24% Similarity=0.358 Sum_probs=87.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |..++.++...+ +++|+++|+++++++.|+++++..|+.+ ++++++|+.+.
T Consensus 80 ~~~~vLDiG~G~---------------G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~ 142 (249)
T 3g89_A 80 GPLRVLDLGTGA---------------GFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVL 142 (249)
T ss_dssp SSCEEEEETCTT---------------TTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHH
T ss_pred CCCEEEEEcCCC---------------CHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHh
Confidence 467999999999 999999999875 7899999999999999999999999975 99999999765
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
... ....++||+|+..+. ..+..+++.+.++|+|||.+++
T Consensus 143 ~~~---~~~~~~fD~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 143 ARE---AGHREAYARAVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTS---TTTTTCEEEEEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred hcc---cccCCCceEEEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 321 001378999999764 4578899999999999999886
No 63
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=5.6e-13 Score=115.99 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=87.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |..++.++...| +.+++++|+++++++.|+++++..|+ ++++++.+|+.+.
T Consensus 41 ~~~~vLDiGcG~---------------G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~ 103 (214)
T 1yzh_A 41 DNPIHVEVGSGK---------------GAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDL 103 (214)
T ss_dssp CCCEEEEESCTT---------------SHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCG
T ss_pred CCCeEEEEccCc---------------CHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHH
Confidence 456999999999 999999999886 78999999999999999999999998 5799999999763
Q ss_pred HHHHhhcCCCCceeEEEEcCCcc-----------chHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~-----------~~~~~~~~~~~lLkpgG~ivid 243 (294)
...+ ..++||+|+++.+.. .+..+++.+.+.|+|||.+++.
T Consensus 104 ~~~~----~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 104 TDYF----EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp GGTS----CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred Hhhc----CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 2111 246899999875422 2478999999999999999884
No 64
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.44 E-value=1.7e-12 Score=113.40 Aligned_cols=136 Identities=15% Similarity=0.183 Sum_probs=100.2
Q ss_pred hhCCCeEEEEccc-cccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGVY-TVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~g-~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++.+|||+||| + |..++.++... +.+|+++|+++++++.|+++++..|+ +++++.+|+
T Consensus 53 ~~~~~~vLDlG~G~~---------------G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~ 113 (230)
T 3evz_A 53 LRGGEVALEIGTGHT---------------AMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNG 113 (230)
T ss_dssp CCSSCEEEEECCTTT---------------CHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSS
T ss_pred cCCCCEEEEcCCCHH---------------HHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCc
Confidence 4567899999999 9 99999999875 57999999999999999999999998 799999996
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCc----------------------cchHHHHHHHHhcccCCeEEEEecccCCCcccC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEK----------------------RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVAD 253 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~----------------------~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~ 253 (294)
.... .+ ..++||+|+.+++. ..+..+++.+.++|+|||.+++--. ++.
T Consensus 114 ~~~~-~~----~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~--- 183 (230)
T 3evz_A 114 GIIK-GV----VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP--DKE--- 183 (230)
T ss_dssp CSST-TT----CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE--SCH---
T ss_pred hhhh-hc----ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec--ccH---
Confidence 4221 11 14789999998541 1157899999999999999987311 110
Q ss_pred cccCCcchHHHHHHHHHhhhCCCeEEEEeecCCceEE
Q 022597 254 QMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTI 290 (294)
Q Consensus 254 ~~~~~~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i 290 (294)
....++.+.+. ..++....+....|-.+
T Consensus 184 --------~~~~~~~~~l~-~~g~~~~~~~~~~g~~~ 211 (230)
T 3evz_A 184 --------KLLNVIKERGI-KLGYSVKDIKFKVGTRW 211 (230)
T ss_dssp --------HHHHHHHHHHH-HTTCEEEEEEECCCC-C
T ss_pred --------hHHHHHHHHHH-HcCCceEEEEecCCCeE
Confidence 12334444443 33567777777666543
No 65
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=2.1e-12 Score=111.16 Aligned_cols=101 Identities=11% Similarity=0.212 Sum_probs=88.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++.. + ..+|+++|+++++++.|+++++..++.+ +++..+|+.+.
T Consensus 60 ~~~~vLDiG~G~---------------G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 121 (205)
T 3grz_A 60 KPLTVADVGTGS---------------GILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD 121 (205)
T ss_dssp SCCEEEEETCTT---------------SHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT
T ss_pred CCCEEEEECCCC---------------CHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc
Confidence 567999999999 9999998863 3 5699999999999999999999999876 99999998763
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
. .++||+|+.+.....+..+++.+.++|+|||.+++..+
T Consensus 122 ~--------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 122 V--------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp C--------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred C--------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 1 57899999998877778889999999999999999655
No 66
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.43 E-value=5.1e-13 Score=115.20 Aligned_cols=113 Identities=20% Similarity=0.310 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..|.....+...+...++.+|||+|||+ |+.+..++.. +++|+++|+++++++.|+++++..
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~---------------G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~ 122 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGS---------------GYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNL 122 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCC---------------CHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHc
Confidence 3566666666666667788999999999 9999999987 589999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
|+. +++++.+|+.+.... .++||+|+++....... +.+.++|+|||.+++.
T Consensus 123 ~~~-~v~~~~~d~~~~~~~------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 123 DLH-NVSTRHGDGWQGWQA------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp TCC-SEEEEESCGGGCCGG------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred CCC-ceEEEECCcccCCcc------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 987 699999999774332 47899999986544333 3578999999999985
No 67
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.42 E-value=4.4e-12 Score=109.61 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=92.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||+|||+ |..+..++...++..+++++|+++++++.|+++++..++. ++++..+|+
T Consensus 34 ~~~~~~~vLDiG~G~---------------G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~ 97 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGA---------------GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEE 97 (219)
T ss_dssp TCCTTCEEEESSCTT---------------CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBT
T ss_pred CCCCCCEEEEEecCC---------------CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeccc
Confidence 445667999999999 9999999998755789999999999999999999999987 699999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
.+.. + ..++||+|+.... ..+...+++.+.++|+|||.+++.+....
T Consensus 98 ~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 98 NKIP--L----PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp TBCS--S----CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ccCC--C----CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 7642 1 2578999998654 34568899999999999999999765433
No 68
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.42 E-value=1.8e-12 Score=117.46 Aligned_cols=116 Identities=17% Similarity=0.266 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHhhh--CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 104 SPDQAQLLAMLVQIL--GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 104 ~~~~~~lL~~l~~~~--~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.|++..++..++... ++.+|||+|||+ |..++.++...+ +.+|+++|+++++++.|+++++.
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~Gs---------------G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~ 155 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGT---------------GAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQH 155 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTT---------------SHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCc---------------cHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHH
Confidence 566777777777653 567999999999 999999998875 78999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc----------------------------cchHHHHHHHHhc
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK----------------------------RMYQEYFELLLQL 233 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~----------------------------~~~~~~~~~~~~l 233 (294)
.|+. +++++++|+.+.++ .++||+|+.+++- ..+..+++.+.++
T Consensus 156 ~~~~-~v~~~~~d~~~~~~-------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~ 227 (276)
T 2b3t_A 156 LAIK-NIHILQSDWFSALA-------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNA 227 (276)
T ss_dssp HTCC-SEEEECCSTTGGGT-------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGG
T ss_pred cCCC-ceEEEEcchhhhcc-------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHh
Confidence 9987 69999999876432 4689999998531 2467888999999
Q ss_pred ccCCeEEEEe
Q 022597 234 IRVGGIIVID 243 (294)
Q Consensus 234 LkpgG~ivid 243 (294)
|+|||++++.
T Consensus 228 LkpgG~l~~~ 237 (276)
T 2b3t_A 228 LVSGGFLLLE 237 (276)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCCEEEEE
Confidence 9999999986
No 69
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=1.4e-12 Score=114.32 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=86.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |..++.++...| +.+++|+|+++++++.|+++++..|+. +++++.+|+.+.
T Consensus 38 ~~~~vLDiGcG~---------------G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l 100 (213)
T 2fca_A 38 DNPIHIEVGTGK---------------GQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTL 100 (213)
T ss_dssp CCCEEEEECCTT---------------SHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGH
T ss_pred CCceEEEEecCC---------------CHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHH
Confidence 456999999999 999999999875 789999999999999999999999885 599999999874
Q ss_pred HHHHhhcCCCCceeEEEEcCC---cc--------chHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAE---KR--------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~---~~--------~~~~~~~~~~~lLkpgG~ivid 243 (294)
...+ ..++||.|++..+ .. .+..+++.+.+.|+|||.+++.
T Consensus 101 ~~~~----~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 101 TDVF----EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp HHHC----CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred Hhhc----CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 3222 2468999987532 11 1578999999999999999875
No 70
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.42 E-value=1.1e-12 Score=122.20 Aligned_cols=123 Identities=17% Similarity=0.233 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.....+++..++...++.+|||+|||+ |..+..++..++.+++|+++|+++++++.+++++++
T Consensus 101 ~~qd~~s~l~~~~l~~~~g~~VLDlg~G~---------------G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~ 165 (315)
T 1ixk_A 101 YIQEASSMYPPVALDPKPGEIVADMAAAP---------------GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR 165 (315)
T ss_dssp EECCHHHHHHHHHHCCCTTCEEEECCSSC---------------SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHhCCCCCCEEEEeCCCC---------------CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 45566677777777878888999999999 999999999887678999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------------------------chHHHHHHHHhcccC
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRV 236 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------------------------~~~~~~~~~~~lLkp 236 (294)
.|+. +++++++|+.+... . .++||+|++|++.. .+.++++.+.++|+|
T Consensus 166 ~g~~-~v~~~~~D~~~~~~-~-----~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 166 LGVL-NVILFHSSSLHIGE-L-----NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp HTCC-SEEEESSCGGGGGG-G-----CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred hCCC-eEEEEECChhhccc-c-----cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9986 59999999976532 2 46899999986511 125888999999999
Q ss_pred CeEEEEeccc
Q 022597 237 GGIIVIDNVL 246 (294)
Q Consensus 237 gG~ivid~vl 246 (294)
||.+++....
T Consensus 239 GG~lv~stcs 248 (315)
T 1ixk_A 239 GGILVYSTCS 248 (315)
T ss_dssp EEEEEEEESC
T ss_pred CCEEEEEeCC
Confidence 9999997763
No 71
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.41 E-value=4.8e-13 Score=124.09 Aligned_cols=106 Identities=15% Similarity=0.220 Sum_probs=84.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC---C-CCcEEEEEc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---V-SHKVKIKHG 193 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g---l-~~~v~~~~g 193 (294)
.++++|||||||+ |..+..+++.. +..+|++||+|+++++.|++++...+ + ..+++++.+
T Consensus 82 ~~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~ 145 (294)
T 3adn_A 82 GHAKHVLIIGGGD---------------GAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp TTCCEEEEESCTT---------------CHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECS
T ss_pred CCCCEEEEEeCCh---------------hHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEC
Confidence 3578999999999 99999998853 36899999999999999999988653 2 358999999
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccc-------hHHHHHHHHhcccCCeEEEEec
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~-------~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.+.++.. .++||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 146 D~~~~l~~~-----~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 146 DGVNFVNQT-----SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CSCC---CC-----CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred hHHHHHhhc-----CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 998876532 578999999875321 2789999999999999999853
No 72
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.41 E-value=1.5e-12 Score=117.95 Aligned_cols=118 Identities=21% Similarity=0.318 Sum_probs=99.0
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+.|.....+...+.+.++.+|||+|||+ |..++.++..+.++++|+++|+++++++.|+++++..
T Consensus 96 ~~~~~~~~i~~~~~~~~~~~VLDiG~G~---------------G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 160 (277)
T 1o54_A 96 VYPKDSSFIAMMLDVKEGDRIIDTGVGS---------------GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW 160 (277)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHhCCCCCCEEEEECCcC---------------CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc
Confidence 4555555566666777788999999999 9999999998665789999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.++++++.+|+.+.++ .++||+||+|.+ ....+++.+.+.|+|||.+++..
T Consensus 161 ~~~~~v~~~~~d~~~~~~-------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 161 GLIERVTIKVRDISEGFD-------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp TCGGGEEEECCCGGGCCS-------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEECCHHHccc-------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 987789999999976521 468999999874 33578889999999999999864
No 73
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.41 E-value=8.1e-13 Score=113.51 Aligned_cols=100 Identities=11% Similarity=0.153 Sum_probs=87.8
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ +.+++++|+++++++.|+++++..++.+ ++++++|+.+.
T Consensus 65 ~~~~vLDiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 127 (207)
T 1jsx_A 65 QGERFIDVGTGP---------------GLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEF 127 (207)
T ss_dssp CSSEEEEETCTT---------------TTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTS
T ss_pred CCCeEEEECCCC---------------CHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhC
Confidence 367999999999 999999999875 7899999999999999999999999876 99999999764
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
. ..++||+|+... ...+..+++.+.+.|+|||.+++.
T Consensus 128 ~-------~~~~~D~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 128 P-------SEPPFDGVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp C-------CCSCEEEEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred C-------ccCCcCEEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 2 146899999765 356789999999999999999986
No 74
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.41 E-value=3.1e-13 Score=115.54 Aligned_cols=120 Identities=20% Similarity=0.290 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHhh----hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 104 SPDQAQLLAMLVQI----LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 104 ~~~~~~lL~~l~~~----~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
.|+...++..++.. .++.+|||+|||+ |..+..++...+ +.+++++|+++++++.|++++
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~ 74 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGS---------------GCIAVSIALACP-GVSVTAVDLSMDALAVARRNA 74 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSB---------------CHHHHHHHHHCT-TEEEEEEECC-----------
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCH---------------hHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHH
Confidence 45566666666554 4567999999999 999999999875 679999999999999999999
Q ss_pred HHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----------------------------cchHHHHHHH
Q 022597 180 ERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----------------------------RMYQEYFELL 230 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----------------------------~~~~~~~~~~ 230 (294)
+..+. +++++++|+.+.++.... ..++||+|+.+++- ..|..+++.+
T Consensus 75 ~~~~~--~~~~~~~d~~~~~~~~~~--~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (215)
T 4dzr_A 75 ERFGA--VVDWAAADGIEWLIERAE--RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALP 150 (215)
T ss_dssp ----------CCHHHHHHHHHHHHH--TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCC
T ss_pred HHhCC--ceEEEEcchHhhhhhhhh--ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHH
Confidence 98887 799999999875543111 13789999997541 0126777888
Q ss_pred HhcccCCeE-EEEe
Q 022597 231 LQLIRVGGI-IVID 243 (294)
Q Consensus 231 ~~lLkpgG~-ivid 243 (294)
.++|+|||+ +++.
T Consensus 151 ~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 151 PYVLARGRAGVFLE 164 (215)
T ss_dssp GGGBCSSSEEEEEE
T ss_pred HHHhcCCCeEEEEE
Confidence 899999999 5553
No 75
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=2.3e-12 Score=114.09 Aligned_cols=118 Identities=19% Similarity=0.228 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+.+.....+...+...++.+|||+|||+ |..+..++..+.++++|+++|+++++++.|+++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 144 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGS---------------GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF 144 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCc---------------CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 4455445555556667788999999999 9999999998655789999999999999999999988
Q ss_pred -CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 -GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 -gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
| .+++++..+|+.+. .+ +.++||+|++|.+ ....+++.+.+.|+|||.+++..
T Consensus 145 ~g-~~~v~~~~~d~~~~--~~----~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 145 WQ-VENVRFHLGKLEEA--EL----EEAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CC-CCCEEEEESCGGGC--CC----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cC-CCCEEEEECchhhc--CC----CCCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 8 56799999998764 01 1468999999864 34578899999999999998854
No 76
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=7.1e-13 Score=117.02 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=83.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |..+..++... ..+|+++|+++++++.|+++.+..+ .+++++.+|+.+.
T Consensus 60 ~~~~vLDiGcGt---------------G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGM---------------AIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTT---------------SHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHH
T ss_pred CCCeEEEEeccC---------------CHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHh
Confidence 456999999999 99999986532 3589999999999999999888766 5799999999875
Q ss_pred HHHHhhcCCCCceeEEEEcCC--------ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 199 LKALILNGEASSYDFAFVDAE--------KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~--------~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
++.+ ..++||+|+.|.. ......+++.+.++|||||++++-+..
T Consensus 121 ~~~~----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 121 APTL----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GGGS----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred hccc----CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4322 2578999998422 122446789999999999999987654
No 77
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.40 E-value=3.3e-12 Score=122.21 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=96.2
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC-CCcEEEEE
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV-SHKVKIKH 192 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl-~~~v~~~~ 192 (294)
+....++++|||+|||+ |..++.++... ..+|+++|+++++++.|+++++.+|+ .++++++.
T Consensus 215 l~~~~~~~~VLDl~cG~---------------G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~ 277 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSYT---------------GGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVR 277 (396)
T ss_dssp HHHHCTTCEEEEESCTT---------------CSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHhhCCCeEEEeeccC---------------CHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 34446778999999999 99999998852 46999999999999999999999999 66899999
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+|+.+.++.+... .++||+|++|++. ..+.+++..+.++|+|||++++...
T Consensus 278 ~D~~~~~~~~~~~--~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 278 DDVFKLLRTYRDR--GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp SCHHHHHHHHHHT--TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhc--CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999887765332 3689999999864 5688999999999999999998654
No 78
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=2.4e-12 Score=120.00 Aligned_cols=120 Identities=16% Similarity=0.246 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..|.....+...+.+.++.+|||+|||+ |+.+..++...++.++|+++|+++++++.|+++++..
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~---------------G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~ 153 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGS---------------GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 153 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCc---------------CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHh
Confidence 4555445555555777888999999999 9999999998655789999999999999999999874
Q ss_pred C----------CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 183 G----------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 183 g----------l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
| ..++++++.+|+.+....+. .++||+||+|... ...+++.+.+.|+|||.+++.
T Consensus 154 ~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~----~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 154 RDSWKLSHVEEWPDNVDFIHKDISGATEDIK----SLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp HHHHTTTCSSCCCCCEEEEESCTTCCC-----------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEE
T ss_pred hcccccccccccCCceEEEECChHHcccccC----CCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEE
Confidence 3 34689999999987543321 3579999998653 334788999999999999864
No 79
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.39 E-value=2e-12 Score=116.88 Aligned_cols=103 Identities=20% Similarity=0.293 Sum_probs=88.0
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
+.+|||||||+ |..+..++.. +.+|+++|+++++++.|+++++..|+.++++++.+|+.+..
T Consensus 69 ~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 69 KLRVLDAGGGE---------------GQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA 130 (285)
T ss_dssp CCEEEEETCTT---------------CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG
T ss_pred CCEEEEeCCcc---------------hHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh
Confidence 56999999999 9999999886 57999999999999999999999999889999999997754
Q ss_pred HHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 200 KALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+. ..++||+|+.... ..+...+++.+.++|+|||++++...
T Consensus 131 ~~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 131 SH-----LETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GG-----CSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hh-----cCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 22 1579999998754 34568899999999999999998764
No 80
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.39 E-value=2.1e-12 Score=112.87 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=86.6
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC----CCcEEEEEeCChHHHHHHHHHHHHhCC----CCcE
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP----ESGCLVACERDARSLEVAKKYYERAGV----SHKV 188 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~----~~~~v~~id~~~~~~~~A~~~~~~~gl----~~~v 188 (294)
..++.+|||||||+ |+.+..++.... +.++|+++|+++++++.|+++++..++ .+++
T Consensus 78 ~~~~~~VLdiG~G~---------------G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 78 LKPGSRAIDVGSGS---------------GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp SCTTCEEEEESCTT---------------SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred CCCCCEEEEECCCC---------------CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 45667999999999 999999999875 567999999999999999999999884 4579
Q ss_pred EEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 189 KIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 189 ~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+++.+|+.+..+.... ..++||+|+++..... +++.+.+.|+|||.+++.
T Consensus 143 ~~~~~d~~~~~~~~~~--~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKK--ELGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEEECCGGGCCHHHHH--HHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred EEEECChHhcccccCc--cCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 9999999874311000 0368999999876543 357788999999999886
No 81
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.39 E-value=7.9e-13 Score=120.82 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=90.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++|||+|||+ |..++.++...+ .+|+++|+|+++++.|+++++.+|+.++++++++|+.+.
T Consensus 125 ~~~~VLDlgcG~---------------G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~ 187 (278)
T 2frn_A 125 PDELVVDMFAGI---------------GHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp TTCEEEETTCTT---------------TTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC
T ss_pred CCCEEEEecccC---------------CHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh
Confidence 477999999999 999999998754 289999999999999999999999998899999999876
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.. .++||+|++|++. ...++++.+.+.|+|||++++....
T Consensus 188 ~~-------~~~fD~Vi~~~p~-~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 188 PG-------ENIADRILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CC-------CSCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cc-------cCCccEEEECCch-hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 43 4789999999763 4467888999999999999997764
No 82
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.39 E-value=1.5e-12 Score=127.94 Aligned_cols=125 Identities=17% Similarity=0.222 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+....++++..++...++.+|||+|||+ |..++.++..++..++|+++|++++.++.+++++++
T Consensus 88 ~vQd~ss~l~~~~L~~~~g~~VLDlcaGp---------------Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r 152 (456)
T 3m4x_A 88 YSQEPSAMIVGTAAAAKPGEKVLDLCAAP---------------GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER 152 (456)
T ss_dssp EECCTTTHHHHHHHCCCTTCEEEESSCTT---------------CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHcCCCCCCEEEEECCCc---------------CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45555677778888888889999999999 999999999887678999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------------------------chHHHHHHHHhcccC
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRV 236 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------------------------~~~~~~~~~~~lLkp 236 (294)
.|+. +++++++|+.+..+.. .++||+|++|++.. ...++++.+.++|+|
T Consensus 153 ~g~~-nv~v~~~Da~~l~~~~-----~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 153 WGVS-NAIVTNHAPAELVPHF-----SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp HTCS-SEEEECCCHHHHHHHH-----TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred cCCC-ceEEEeCCHHHhhhhc-----cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 5999999998765444 57899999998610 123778888999999
Q ss_pred CeEEEEecccC
Q 022597 237 GGIIVIDNVLW 247 (294)
Q Consensus 237 gG~ivid~vl~ 247 (294)
||.++...+.+
T Consensus 227 GG~LvYsTCs~ 237 (456)
T 3m4x_A 227 KGQLIYSTCTF 237 (456)
T ss_dssp EEEEEEEESCC
T ss_pred CcEEEEEEeec
Confidence 99999877643
No 83
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.39 E-value=2.3e-12 Score=118.37 Aligned_cols=106 Identities=20% Similarity=0.331 Sum_probs=87.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC--C-CCcEEEEEcch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--V-SHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g--l-~~~v~~~~gda 195 (294)
++++|||||||+ |..+..+++.. +..+++++|+|+++++.|++++...+ + .++++++.+|+
T Consensus 78 ~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 78 EPKNVLVVGGGD---------------GGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp SCCEEEEEECTT---------------SHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred CCCeEEEEeCCc---------------CHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh
Confidence 567999999999 99999888753 36899999999999999999987542 2 46899999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCc------cch-HHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEK------RMY-QEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~------~~~-~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.++.. .++||+|++|... ..+ .++++.+.+.|+|||++++...
T Consensus 142 ~~~l~~~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 142 SKFLENV-----TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHHHHC-----CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHhC-----CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 8876653 5789999998641 112 7999999999999999998743
No 84
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=4.5e-13 Score=122.98 Aligned_cols=109 Identities=15% Similarity=0.089 Sum_probs=91.2
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||||||+ |..+..++....++++|+++|+++++++.|+++++..|+.++++++.+|+.
T Consensus 116 l~~~~~vLDiGcG~---------------G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 180 (305)
T 3ocj_A 116 LRPGCVVASVPCGW---------------MSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAW 180 (305)
T ss_dssp CCTTCEEEETTCTT---------------CHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGG
T ss_pred CCCCCEEEEecCCC---------------CHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchh
Confidence 45677999999999 999998874444578999999999999999999999999889999999998
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
+... .++||+|+.... ......+++.+.+.|+|||.+++.+...
T Consensus 181 ~~~~-------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 181 KLDT-------REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp GCCC-------CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred cCCc-------cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 7421 378999998642 3334568999999999999999988653
No 85
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.38 E-value=2.2e-12 Score=116.19 Aligned_cols=119 Identities=22% Similarity=0.286 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+.|.....+...+.+.++.+|||+|||+ |..+..++..+.++++|+++|+++++++.|+++++..
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGS---------------GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccc---------------cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 5565555555556667778999999999 9999999997655789999999999999999999988
Q ss_pred -C-CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 -G-VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 -g-l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
| +.++++++.+|+.+.. + +.++||+||++.. +..++++.+.+.|+|||.+++..
T Consensus 148 ~g~~~~~v~~~~~d~~~~~--~----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 148 YGQPPDNWRLVVSDLADSE--L----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp HTSCCTTEEEECSCGGGCC--C----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCcEEEEECchHhcC--C----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 5 5568999999987641 1 1468999999875 34578999999999999999854
No 86
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.38 E-value=3.8e-12 Score=121.87 Aligned_cols=109 Identities=16% Similarity=0.178 Sum_probs=91.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC-cEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~-~v~~~~gda~ 196 (294)
.++++|||+|||+ |..++.++... ..+|+++|+++++++.|+++++.+|+.+ +++++.+|+.
T Consensus 211 ~~~~~VLDl~cGt---------------G~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~ 273 (385)
T 2b78_A 211 AAGKTVLNLFSYT---------------AAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF 273 (385)
T ss_dssp TBTCEEEEETCTT---------------THHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH
T ss_pred cCCCeEEEEeecc---------------CHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHH
Confidence 5678999999999 99999998742 3589999999999999999999999976 8999999999
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.++.+... ..+||+|++|++. ..|.++++.+.++|+|||++++...
T Consensus 274 ~~l~~~~~~--~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 274 DYFKYARRH--HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHHHHHT--TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHh--CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 887765432 3589999999763 2366677888999999999998754
No 87
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.3e-12 Score=119.16 Aligned_cols=112 Identities=10% Similarity=0.082 Sum_probs=94.0
Q ss_pred HHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcE
Q 022597 109 QLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKV 188 (294)
Q Consensus 109 ~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v 188 (294)
+.+..+....++.+|||+|||+ |..++.++...+ .++|+++|+++++++.|+++++.+|+. ++
T Consensus 109 e~~~~~~~~~~~~~VLDlgcG~---------------G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~ 171 (272)
T 3a27_A 109 ERKRMAFISNENEVVVDMFAGI---------------GYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NV 171 (272)
T ss_dssp HHHHHHTSCCTTCEEEETTCTT---------------TTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SE
T ss_pred HHHHHHHhcCCCCEEEEecCcC---------------CHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CE
Confidence 3333333445677999999999 999999999865 679999999999999999999999987 48
Q ss_pred EEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 189 KIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 189 ~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++.+|+.+. +. .++||+|++|++. .+.++++.+.+.|+|||++++...
T Consensus 172 ~~~~~d~~~~-~~------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 172 IPILADNRDV-EL------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEEESCGGGC-CC------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHc-Cc------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 8999999875 32 3689999999875 677889999999999999998765
No 88
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.38 E-value=5e-12 Score=116.25 Aligned_cols=116 Identities=16% Similarity=0.389 Sum_probs=94.9
Q ss_pred CCHHHHHHHHHHHhh---hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 103 VSPDQAQLLAMLVQI---LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 103 v~~~~~~lL~~l~~~---~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
-.|++..++..+... .++.+|||+|||+ |..++.++.. + +.+|+++|+|+++++.|++++
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~Gs---------------G~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGS---------------GAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTT---------------SHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCch---------------hHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHH
Confidence 456666666666543 3567999999999 9999999998 4 789999999999999999999
Q ss_pred HHhCCCCcEEEEEcchhhhHHHHhhcCCCCce---eEEEEcCCccc----------------------hHHHHHHHH-hc
Q 022597 180 ERAGVSHKVKIKHGLAADSLKALILNGEASSY---DFAFVDAEKRM----------------------YQEYFELLL-QL 233 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~f---D~vfiD~~~~~----------------------~~~~~~~~~-~l 233 (294)
+..|+.++++++++|+.+.+ .++| |+|+.+++.-. -..+++.+. +.
T Consensus 167 ~~~~l~~~v~~~~~D~~~~~--------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~ 238 (284)
T 1nv8_A 167 ERHGVSDRFFVRKGEFLEPF--------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRY 238 (284)
T ss_dssp HHTTCTTSEEEEESSTTGGG--------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHC
T ss_pred HHcCCCCceEEEECcchhhc--------ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhc
Confidence 99999888999999998743 2468 99999854110 126889999 99
Q ss_pred ccCCeEEEEe
Q 022597 234 IRVGGIIVID 243 (294)
Q Consensus 234 LkpgG~ivid 243 (294)
|+|||.+++.
T Consensus 239 l~pgG~l~~e 248 (284)
T 1nv8_A 239 DTSGKIVLME 248 (284)
T ss_dssp CCTTCEEEEE
T ss_pred CCCCCEEEEE
Confidence 9999999984
No 89
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.38 E-value=5.4e-12 Score=129.82 Aligned_cols=122 Identities=20% Similarity=0.245 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 022597 105 PDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV 184 (294)
Q Consensus 105 ~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl 184 (294)
.++...-..+....++++|||+|||| |..++.++... ..+|+++|+|+.+++.|+++++.+|+
T Consensus 525 ~d~r~~r~~l~~~~~g~~VLDlg~Gt---------------G~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl 587 (703)
T 3v97_A 525 LDHRIARRMLGQMSKGKDFLNLFSYT---------------GSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGL 587 (703)
T ss_dssp GGGHHHHHHHHHHCTTCEEEEESCTT---------------CHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHhcCCCcEEEeeech---------------hHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 34444445555666888999999999 99999988742 46799999999999999999999999
Q ss_pred C-CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--------------cchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 185 S-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--------------RMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 185 ~-~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--------------~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
. ++++++++|+.+.++.. .++||+|++|++. +.|.+++..+.++|+|||++++....+.
T Consensus 588 ~~~~v~~i~~D~~~~l~~~-----~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~ 661 (703)
T 3v97_A 588 TGRAHRLIQADCLAWLREA-----NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG 661 (703)
T ss_dssp CSTTEEEEESCHHHHHHHC-----CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred CccceEEEecCHHHHHHhc-----CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcc
Confidence 7 68999999999887653 5789999999862 3578889999999999999998877543
No 90
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.9e-12 Score=116.12 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=87.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh-CCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~-gl~~~v~~~~gda~~ 197 (294)
++.+|||||||+ |..+..++..++++.+|+++|+++.+++.|+++++.. +...+++++++|+.+
T Consensus 36 ~~~~vLDiGcG~---------------G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 36 ERKLLVDVGCGP---------------GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CCSEEEEETCTT---------------THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CCCEEEEECCCC---------------CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 567999999999 9999999988755899999999999999999999987 566789999999976
Q ss_pred hHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
....-......++||+|++... .-+...+++.+.+.|+|||.+++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 4211000001278999998643 11778999999999999999998
No 91
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=2.4e-12 Score=121.02 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=86.3
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 201 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~ 201 (294)
+|||||||+ |..+.++++..+ +.+|++||+|+++++.|++++... ...+++++.+|+.+.++.
T Consensus 92 rVLdIG~G~---------------G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~ 154 (317)
T 3gjy_A 92 RITHLGGGA---------------CTMARYFADVYP-QSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAES 154 (317)
T ss_dssp EEEEESCGG---------------GHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHT
T ss_pred EEEEEECCc---------------CHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhh
Confidence 999999999 999999999876 669999999999999999998643 246899999999987754
Q ss_pred HhhcCCCCceeEEEEcCCcc-------chHHHHHHHHhcccCCeEEEEecc
Q 022597 202 LILNGEASSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 202 l~~~~~~~~fD~vfiD~~~~-------~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
. ..++||+||+|.... ...++|+.+.+.|+|||++++...
T Consensus 155 ~----~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 155 F----TPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp C----CTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c----cCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3 147899999986421 137899999999999999998653
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.38 E-value=1.7e-12 Score=120.41 Aligned_cols=117 Identities=26% Similarity=0.366 Sum_probs=95.4
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..|.....+...+...++.+|||||||+ |..+..++...+.+++|+++|+++++++.|+++++..
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~---------------G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 123 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGT---------------GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL 123 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCc---------------hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 4556555555566666788999999999 9999999998764688999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.+ ++++.+|+.+.++. .++||+|+++....... +.+.+.|+|||.+++..
T Consensus 124 g~~~-v~~~~~d~~~~~~~------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 124 GIEN-VIFVCGDGYYGVPE------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp TCCS-EEEEESCGGGCCGG------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred CCCC-eEEEECChhhcccc------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 9875 99999999874331 36899999987644433 56788999999999964
No 93
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.38 E-value=3.6e-12 Score=121.90 Aligned_cols=111 Identities=23% Similarity=0.367 Sum_probs=94.6
Q ss_pred hhh-CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 116 QIL-GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 116 ~~~-~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
... ++++|||+|||+ |..++.++.. + ..+|+++|+++++++.|+++++.+|+.++++++.+|
T Consensus 213 ~~~~~~~~VLDl~~G~---------------G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d 275 (396)
T 2as0_A 213 KWVQPGDRVLDVFTYT---------------GGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS 275 (396)
T ss_dssp GGCCTTCEEEETTCTT---------------THHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred HHhhCCCeEEEecCCC---------------CHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECC
Confidence 444 678999999999 9999999885 2 469999999999999999999999998789999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+.++.+... .++||+|++|++. ..+.+++..+.++|+|||++++...
T Consensus 276 ~~~~~~~~~~~--~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 276 AFEEMEKLQKK--GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp HHHHHHHHHHT--TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred HHHHHHHHHhh--CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99887655322 3689999999874 5578899999999999998887654
No 94
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.37 E-value=2.5e-12 Score=116.75 Aligned_cols=110 Identities=14% Similarity=0.224 Sum_probs=92.5
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||||||+ |..+..++... +.+|+++|+++++++.|+++++..|+.++++++.+|+
T Consensus 79 ~~~~~~~vLDiGcG~---------------G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 141 (297)
T 2o57_A 79 VLQRQAKGLDLGAGY---------------GGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF 141 (297)
T ss_dssp CCCTTCEEEEETCTT---------------SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT
T ss_pred CCCCCCEEEEeCCCC---------------CHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc
Confidence 445677999999999 99999999876 4699999999999999999999999988999999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
.+.. + +.++||+|+.... ..+...+++.+.+.|+|||.+++.+..+.
T Consensus 142 ~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 142 LEIP--C----EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp TSCS--S----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred ccCC--C----CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 7631 1 2478999997643 24478999999999999999999876543
No 95
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.37 E-value=2.6e-12 Score=113.09 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.|.....+...+...++.+|||+|||+ |..+..++.. +.+++++|+++++++.|+++++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~---------------G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~ 135 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGS---------------GALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKK 135 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHhcCCCCCCEEEEeCCCc---------------cHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHH
Confidence 35576666676777777888999999999 9999999987 57999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.++.+++++..+|+.+... ..++||+||.+.+ ....+++.+.+.|+|||.+++..
T Consensus 136 ~~~~~~~~~~~~d~~~~~~------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 136 FNLGKNVKFFNVDFKDAEV------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp TTCCTTEEEECSCTTTSCC------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred cCCCCcEEEEEcChhhccc------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 9987889999999876420 1468999999865 34577889999999999998754
No 96
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.37 E-value=3.2e-12 Score=121.94 Aligned_cols=110 Identities=25% Similarity=0.368 Sum_probs=94.5
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
+... ++++|||+|||+ |..++.++.. ..+|+++|+++++++.|+++++.+|+.+ ++++.+
T Consensus 205 ~~~~-~~~~VLDlg~G~---------------G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~ 264 (382)
T 1wxx_A 205 MERF-RGERALDVFSYA---------------GGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEA 264 (382)
T ss_dssp GGGC-CEEEEEEETCTT---------------THHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEES
T ss_pred HHhc-CCCeEEEeeecc---------------CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEEC
Confidence 3344 677999999999 9999999987 4799999999999999999999999976 999999
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|+.+.++.+... .++||+|++|++. ..+.+++..+.++|+|||++++...
T Consensus 265 d~~~~~~~~~~~--~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 265 NAFDLLRRLEKE--GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CHHHHHHHHHHT--TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CHHHHHHHHHhc--CCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999887765332 3689999999874 5578899999999999999998755
No 97
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=2.5e-12 Score=111.20 Aligned_cols=116 Identities=20% Similarity=0.314 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC
Q 022597 104 SPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 183 (294)
Q Consensus 104 ~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g 183 (294)
.|.....+...+...++.+|||+|||+ |+.+..++...++.++|+++|+++++++.|+++++..|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 126 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGC---------------GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG 126 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCc---------------cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC
Confidence 344444444445556677999999999 99999999987546899999999999999999999988
Q ss_pred CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 184 VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 184 l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.+ +++..+|..+.++. .++||+|+++....... +.+.++|+|||.+++.-
T Consensus 127 ~~~-v~~~~~d~~~~~~~------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 127 YDN-VIVIVGDGTLGYEP------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CTT-EEEEESCGGGCCGG------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred CCC-eEEEECCcccCCCC------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEEE
Confidence 864 99999998543321 36899999987644333 47889999999999863
No 98
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.37 E-value=1.8e-11 Score=110.18 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=87.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++.+++. +.+|+++|+++.+++.|+++++.+++. +++..+|..+
T Consensus 119 ~~~~~VLDiGcG~---------------G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~ 178 (254)
T 2nxc_A 119 RPGDKVLDLGTGS---------------GVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEA 178 (254)
T ss_dssp CTTCEEEEETCTT---------------SHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHH
T ss_pred CCCCEEEEecCCC---------------cHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhh
Confidence 3567999999999 9999988774 349999999999999999999999886 8999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.++ .++||+|+.+........+++.+.++|+|||.+++..+.
T Consensus 179 ~~~-------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 179 ALP-------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HGG-------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCc-------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 421 468999999887667788999999999999999997653
No 99
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.37 E-value=1.2e-12 Score=119.00 Aligned_cols=108 Identities=19% Similarity=0.292 Sum_probs=91.5
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||||||+ |..+..++...+.+++|+++|+++.+++.|+++++..+. +++++.+|+
T Consensus 19 ~~~~~~~vLDiGcG~---------------G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~ 81 (284)
T 3gu3_A 19 KITKPVHIVDYGCGY---------------GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDA 81 (284)
T ss_dssp CCCSCCEEEEETCTT---------------THHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCT
T ss_pred ccCCCCeEEEecCCC---------------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcch
Confidence 345677999999999 999999999887668999999999999999999987665 799999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
.+... .++||+|++... ..+...+++.+.+.|+|||.+++.+..|
T Consensus 82 ~~~~~-------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 82 TEIEL-------NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHW 129 (284)
T ss_dssp TTCCC-------SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCH
T ss_pred hhcCc-------CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecch
Confidence 76321 468999998754 3456899999999999999999877653
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.37 E-value=1.6e-12 Score=119.13 Aligned_cols=114 Identities=18% Similarity=0.300 Sum_probs=88.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC-------------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS------------- 185 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~------------- 185 (294)
.+++|||||||+ |..++.++...+ +.+|+++|+++.+++.|+++++..+..
T Consensus 46 ~~~~VLDiGCG~---------------G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~ 109 (292)
T 3g07_A 46 RGRDVLDLGCNV---------------GHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDP 109 (292)
T ss_dssp TTSEEEEESCTT---------------CHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC-------------------
T ss_pred CCCcEEEeCCCC---------------CHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccc
Confidence 567999999999 999999999886 579999999999999999998766533
Q ss_pred --------------------------------------------CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--
Q 022597 186 --------------------------------------------HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-- 219 (294)
Q Consensus 186 --------------------------------------------~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-- 219 (294)
++++++++|+.+....+.. ...++||+|+....
T Consensus 110 ~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~-~~~~~fD~I~~~~vl~ 188 (292)
T 3g07_A 110 GAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE-AQTPEYDVVLCLSLTK 188 (292)
T ss_dssp --------------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT-TCCCCEEEEEEESCHH
T ss_pred ccccccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCcccccc-ccCCCcCEEEEChHHH
Confidence 5899999998743322211 12579999998653
Q ss_pred -------ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 220 -------KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 220 -------~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
......+|+.+.++|+|||++++..--|..
T Consensus 189 ~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 189 WVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSS 225 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHH
T ss_pred HhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchh
Confidence 225678999999999999999998766654
No 101
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.36 E-value=5.1e-12 Score=124.72 Aligned_cols=125 Identities=20% Similarity=0.254 Sum_probs=103.5
Q ss_pred CCCHHHHHHHHHHHhhh--CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQIL--GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~--~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
.+.....+++..++... ++.+|||+|||+ |..++.++..++..++|+++|+++++++.+++++
T Consensus 98 ~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGp---------------G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~ 162 (479)
T 2frx_A 98 YIQEASSMLPVAALFADGNAPQRVMDVAAAP---------------GSKTTQISARMNNEGAILANEFSASRVKVLHANI 162 (479)
T ss_dssp EECCHHHHHHHHHHTTTTCCCSEEEESSCTT---------------SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHhCcccCCCCEEEEeCCCC---------------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 45556667777777776 788999999999 9999999999876799999999999999999999
Q ss_pred HHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------------------------chHHHHHHHHhcc
Q 022597 180 ERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLI 234 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------------------------~~~~~~~~~~~lL 234 (294)
++.|+. +++++++|+.+..... .++||+|++|++.. ...++++.+.++|
T Consensus 163 ~r~g~~-nv~~~~~D~~~~~~~~-----~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L 236 (479)
T 2frx_A 163 SRCGIS-NVALTHFDGRVFGAAV-----PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL 236 (479)
T ss_dssp HHHTCC-SEEEECCCSTTHHHHS-----TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHcCCC-cEEEEeCCHHHhhhhc-----cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc
Confidence 999986 5999999998754322 47899999987521 0246788889999
Q ss_pred cCCeEEEEecccC
Q 022597 235 RVGGIIVIDNVLW 247 (294)
Q Consensus 235 kpgG~ivid~vl~ 247 (294)
||||.+++..+.+
T Consensus 237 kpGG~LvysTcs~ 249 (479)
T 2frx_A 237 RPGGTLVYSTCTL 249 (479)
T ss_dssp EEEEEEEEEESCC
T ss_pred CCCCEEEEecccC
Confidence 9999999987744
No 102
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.35 E-value=4.7e-12 Score=119.11 Aligned_cols=120 Identities=19% Similarity=0.217 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.+..+..+..++...++.+|||+|||+ |..++.++....++.+++++|+|+++++.|+++++.
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGs---------------G~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~ 250 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGS---------------GTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA 250 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTT---------------SHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCc---------------CHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH
Confidence 45666777777777777788999999999 999999998763468999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----------cchHHHHHHHHhcccCCeEEEEe
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----------RMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----------~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+|+. ++++.++|+.+.... .++||+|+.|++- ..|..+++.+.+.|+|||.+++-
T Consensus 251 ~g~~-~i~~~~~D~~~~~~~------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 251 SGLS-WIRFLRADARHLPRF------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp TTCT-TCEEEECCGGGGGGT------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred cCCC-ceEEEeCChhhCccc------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9998 899999999875322 3568999998762 12678899999999999999874
No 103
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.35 E-value=1.4e-11 Score=119.35 Aligned_cols=149 Identities=17% Similarity=0.227 Sum_probs=102.3
Q ss_pred CCCeEEEEccc------cccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 119 GAQRCIEVGVY------TVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 119 ~~~~vLEiG~g------~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
++.+||||||| + |..++.+++...++++|+++|+++++. . ...++++++
T Consensus 216 ~~~rVLDIGCG~~~~~~T---------------GG~Sl~la~~~fP~a~V~GVDiSp~m~---------~-~~~rI~fv~ 270 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEW---------------GGGSLRMWKSFFPRGQIYGLDIMDKSH---------V-DELRIRTIQ 270 (419)
T ss_dssp SCCEEEEECCSCTTCSSC---------------CCHHHHHHHHHCTTCEEEEEESSCCGG---------G-CBTTEEEEE
T ss_pred CCCEEEEEecCCCcCCCC---------------CHHHHHHHHHhCCCCEEEEEECCHHHh---------h-cCCCcEEEE
Confidence 67899999999 7 777888887653478999999999962 1 245899999
Q ss_pred cchhhh--HHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccCCeEEEEecccC------CCcccCcccCCcchH
Q 022597 193 GLAADS--LKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGGIIVIDNVLW------HGKVADQMVNDAKTI 262 (294)
Q Consensus 193 gda~~~--l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkpgG~ivid~vl~------~g~v~~~~~~~~~~~ 262 (294)
+|+.+. ...+... .++||+||.+... .++...|+.+.++|||||++++.|+.+ .|...+......-..
T Consensus 271 GDa~dlpf~~~l~~~--d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~ 348 (419)
T 3sso_A 271 GDQNDAEFLDRIARR--YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLG 348 (419)
T ss_dssp CCTTCHHHHHHHHHH--HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHH
T ss_pred ecccccchhhhhhcc--cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHH
Confidence 999763 2222111 3789999998653 557889999999999999999999972 232211111111123
Q ss_pred HHHHHHHHhhhC---------CCe---EEEEeecCCceEEEEEC
Q 022597 263 SIRNFNKNLMED---------ERV---SISMVPIGDGMTICQKR 294 (294)
Q Consensus 263 ~ir~f~~~l~~~---------~~~---~~~~lp~gdGl~i~~k~ 294 (294)
.++++.+.+... |.+ .+.-+.+-++|.+..|+
T Consensus 349 ~lk~l~D~l~~~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 349 LLKSLIDAIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp HHHHHHHHHTGGGSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred HHHHHHHHhcccccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 566666655321 112 15567888999998884
No 104
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.34 E-value=3.8e-13 Score=118.57 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=89.1
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
..++..+....++.+|||+|||+ |..++.++.. +.+|+++|+++.+++.|+++++..|+.++
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~---------------G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 128 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGV---------------GGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADK 128 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHhhhccCCCEEEECcccc---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcC
Confidence 33344444455788999999999 9999999985 48999999999999999999999999778
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc---chHHHHHHHHhcccCCeEEEEec
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---MYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~---~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++++++|+.+..+ .++||+|+++++.. .....+..+.++|+|||+++++.
T Consensus 129 ~~~~~~d~~~~~~-------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 129 IEFICGDFLLLAS-------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp EEEEESCHHHHGG-------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred eEEEECChHHhcc-------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 9999999987541 47899999987522 22224445678899999987764
No 105
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.34 E-value=3.1e-12 Score=111.95 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=83.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+++++|+++|.++++++.++++++.. .+++++.+|+.+.
T Consensus 73 ~~~~vLDlG~G~---------------G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~ 134 (227)
T 1g8a_A 73 PGKSVLYLGIAS---------------GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKP 134 (227)
T ss_dssp TTCEEEEETTTS---------------TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCG
T ss_pred CCCEEEEEeccC---------------CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCc
Confidence 455999999999 9999999988755689999999999999999888754 5799999998763
Q ss_pred H--HHHhhcCCCCceeEEEEcCCccchH-HHHHHHHhcccCCeEEEEe
Q 022597 199 L--KALILNGEASSYDFAFVDAEKRMYQ-EYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l--~~l~~~~~~~~fD~vfiD~~~~~~~-~~~~~~~~lLkpgG~ivid 243 (294)
. ..+ .++||+|+.|....... .+++.+.+.|+|||.+++.
T Consensus 135 ~~~~~~-----~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 135 EEYRAL-----VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp GGGTTT-----CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcc-----cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 111 35899999998744443 4499999999999999986
No 106
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=8.3e-12 Score=120.30 Aligned_cols=106 Identities=22% Similarity=0.355 Sum_probs=88.6
Q ss_pred HhhhC-CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 115 VQILG-AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 115 ~~~~~-~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
....+ +++|||+|||+ |..++.++.. +++|+++|+|+.+++.|+++++.+|+.. ++.++
T Consensus 209 ~~~~~~g~~VLDlg~Gt---------------G~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~ 268 (393)
T 4dmg_A 209 EAMVRPGERVLDVYSYV---------------GGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHG 268 (393)
T ss_dssp HTTCCTTCEEEEESCTT---------------THHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEES
T ss_pred HHHhcCCCeEEEcccch---------------hHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEc
Confidence 34444 78999999999 9999999885 4569999999999999999999999975 45699
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCc------------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|+.+.++.+ .+.||+|++|++. ..|.++++.+.++|+|||++++...
T Consensus 269 D~~~~l~~~-----~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 269 EALPTLRGL-----EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CHHHHHHTC-----CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cHHHHHHHh-----cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 998877654 3449999999873 4578899999999999999996554
No 107
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.33 E-value=2.4e-11 Score=117.62 Aligned_cols=157 Identities=18% Similarity=0.244 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+....++++..++...++.+|||+|||+ |..+..++...+ +++|+++|+++..++.+++++++.
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~---------------G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~ 293 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAP---------------GGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRL 293 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTT---------------CHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHT
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCc---------------hHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHc
Confidence 4556677777888878888999999999 999999999886 489999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------------------------chHHHHHHHHhcccCC
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRVG 237 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------------------------~~~~~~~~~~~lLkpg 237 (294)
|+. ++++.+|+.+..+.+. .++||+|++|++.. .+.++++.+.++|+||
T Consensus 294 g~~--~~~~~~D~~~~~~~~~----~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 294 GMK--ATVKQGDGRYPSQWCG----EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp TCC--CEEEECCTTCTHHHHT----TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred CCC--eEEEeCchhhchhhcc----cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 984 7899999987654331 36899999987521 1257889999999999
Q ss_pred eEEEEecccCCCcccCcccCCcchHHHHHHHHHhhhCCCeEE-----------EEeec---CCceEEEE
Q 022597 238 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSI-----------SMVPI---GDGMTICQ 292 (294)
Q Consensus 238 G~ivid~vl~~g~v~~~~~~~~~~~~ir~f~~~l~~~~~~~~-----------~~lp~---gdGl~i~~ 292 (294)
|.+++....+... .....+..|. .++|+++. .+.|- +||+-+|+
T Consensus 368 G~lvystcs~~~~--------ene~~v~~~l---~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~ 425 (429)
T 1sqg_A 368 GTLVYATCSVLPE--------ENSLQIKAFL---QRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAK 425 (429)
T ss_dssp EEEEEEESCCCGG--------GTHHHHHHHH---HHCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEE
T ss_pred CEEEEEECCCChh--------hHHHHHHHHH---HhCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEE
Confidence 9999987644321 1122344443 34555433 45674 58887775
No 108
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.33 E-value=3.8e-13 Score=122.74 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=80.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CC-CCcEEEEEcch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl-~~~v~~~~gda 195 (294)
++++|||||||+ |..+..+++. + .+|+++|+|+++++.|++++... ++ .++++++.+|+
T Consensus 72 ~~~~VL~iG~G~---------------G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~ 133 (262)
T 2cmg_A 72 ELKEVLIVDGFD---------------LELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL 133 (262)
T ss_dssp CCCEEEEESSCC---------------HHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG
T ss_pred CCCEEEEEeCCc---------------CHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH
Confidence 467999999999 9999888876 4 89999999999999999887531 22 35899999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+.+ ++||+|++|...+ ..+++.+.+.|+|||++++.
T Consensus 134 ~~~~---------~~fD~Ii~d~~dp--~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 134 DLDI---------KKYDLIFCLQEPD--IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp GSCC---------CCEEEEEESSCCC--HHHHHHHHTTEEEEEEEEEE
T ss_pred HHHH---------hhCCEEEECCCCh--HHHHHHHHHhcCCCcEEEEE
Confidence 7652 5799999997543 34899999999999999985
No 109
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.33 E-value=4.8e-12 Score=113.62 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=88.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|+|||||+ |+.++.++...+ .++|+++|+++..++.|+++++.+|+.++|+++.+|..+.
T Consensus 15 ~g~~VlDIGtGs---------------G~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 15 QGAILLDVGSDH---------------AYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp TTEEEEEETCST---------------THHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred CCCEEEEeCCCc---------------HHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh
Confidence 345999999999 999999998654 6799999999999999999999999999999999999765
Q ss_pred HHHHhhcCCCCceeEEEEcC-CccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDA-EKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~-~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
++. .++||.|++.. +..-..++++.+...|+++|.+|+..+
T Consensus 79 l~~------~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 79 FEE------TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CCG------GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ccc------CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 431 12699988643 444468889999999999999998755
No 110
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.33 E-value=5.7e-12 Score=112.25 Aligned_cols=106 Identities=16% Similarity=0.232 Sum_probs=87.3
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
+...++.+|||||||+ |..+..++... .+|+++|+++++++.|+++++..|+. +++++.+|
T Consensus 33 l~~~~~~~vLDiGcG~---------------G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d 93 (260)
T 1vl5_A 33 AALKGNEEVLDVATGG---------------GHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGD 93 (260)
T ss_dssp HTCCSCCEEEEETCTT---------------CHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECC
T ss_pred hCCCCCCEEEEEeCCC---------------CHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEec
Confidence 3445677999999999 99999888764 49999999999999999999998876 69999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+.. + ++++||+|+.... ..+...+++.+.+.|+|||.+++.+.
T Consensus 94 ~~~l~--~----~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 94 AEQMP--F----TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp C-CCC--S----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhCC--C----CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 87531 1 2478999998743 34567999999999999999998644
No 111
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.33 E-value=1.6e-12 Score=117.91 Aligned_cols=113 Identities=21% Similarity=0.240 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh-CCC
Q 022597 107 QAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVS 185 (294)
Q Consensus 107 ~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~-gl~ 185 (294)
..+.+...+...++.+|||+|||+ |..+..++..+.++++|+++|+++++++.|+++++.. |.
T Consensus 98 ~~~~~~~~~~~~~~~~VLD~G~G~---------------G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~- 161 (275)
T 1yb2_A 98 DASYIIMRCGLRPGMDILEVGVGS---------------GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI- 161 (275)
T ss_dssp --------CCCCTTCEEEEECCTT---------------SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-
T ss_pred hHHHHHHHcCCCCcCEEEEecCCC---------------CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-
Confidence 334444555566778999999999 9999999998555789999999999999999999988 74
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++++++.+|+.+.+ ..++||+|++|.+ ....+++.+.+.|+|||.+++..
T Consensus 162 ~~v~~~~~d~~~~~-------~~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 162 GNVRTSRSDIADFI-------SDQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp TTEEEECSCTTTCC-------CSCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEE
T ss_pred CcEEEEECchhccC-------cCCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 47999999987632 1468999999764 34688999999999999999864
No 112
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.33 E-value=5.6e-12 Score=116.43 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=89.7
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++|||+|||+ |+.++.+|... .++|+++|+||.+++.+++|++.+|+.++++++++|+.
T Consensus 123 ~~~g~~VlD~~aG~---------------G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~ 185 (278)
T 3k6r_A 123 AKPDELVVDMFAGI---------------GHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR 185 (278)
T ss_dssp CCTTCEEEETTCTT---------------TTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT
T ss_pred cCCCCEEEEecCcC---------------cHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHH
Confidence 34678999999999 99999988763 47999999999999999999999999999999999998
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+..+ .+.||.|+++.+.. ..++++.+.++|++||+|.++..
T Consensus 186 ~~~~-------~~~~D~Vi~~~p~~-~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 186 DFPG-------ENIADRILMGYVVR-THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp TCCC-------CSCEEEEEECCCSS-GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred Hhcc-------ccCCCEEEECCCCc-HHHHHHHHHHHcCCCCEEEEEee
Confidence 7642 57899999997643 34778889999999999987754
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.33 E-value=1.2e-11 Score=104.76 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=85.7
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||+|||+ |..+..++.. +.+++++|+++.+++.|+++++..++. +++++.+|.
T Consensus 29 ~~~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~ 89 (199)
T 2xvm_A 29 KVVKPGKTLDLGCGN---------------GRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDL 89 (199)
T ss_dssp TTSCSCEEEEETCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCG
T ss_pred hccCCCeEEEEcCCC---------------CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcch
Confidence 344667999999999 9999998886 579999999999999999999998885 599999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+... .++||+|+.... ......+++.+.+.|+|||.+++-.
T Consensus 90 ~~~~~-------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 90 NNLTF-------DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GGCCC-------CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhCCC-------CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 76411 478999987643 3467889999999999999976643
No 114
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.33 E-value=6.9e-12 Score=109.43 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=85.1
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC----CCcEEEEE
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV----SHKVKIKH 192 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl----~~~v~~~~ 192 (294)
..++.+|||+|||+ |+.+..++...++.++|+++|+++++++.|+++++..|+ .++++++.
T Consensus 75 ~~~~~~vLDiG~G~---------------G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 139 (226)
T 1i1n_A 75 LHEGAKALDVGSGS---------------GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV 139 (226)
T ss_dssp SCTTCEEEEETCTT---------------SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE
T ss_pred CCCCCEEEEEcCCc---------------CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEE
Confidence 34567999999999 999999998865567999999999999999999998775 45799999
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+|+.+.... .++||+|+++..... +++.+.+.|+|||.+++.-
T Consensus 140 ~d~~~~~~~------~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 140 GDGRMGYAE------EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp SCGGGCCGG------GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred CCcccCccc------CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 998653211 368999999876433 3467889999999999853
No 115
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.33 E-value=5.7e-12 Score=112.33 Aligned_cols=105 Identities=11% Similarity=0.155 Sum_probs=86.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--------CCCCcEEE
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--------GVSHKVKI 190 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--------gl~~~v~~ 190 (294)
++.+|||||||+ |..++.++...+ +.+|+++|+++.+++.|+++++.. |+. ++++
T Consensus 49 ~~~~vLDiGcG~---------------G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~ 111 (246)
T 2vdv_E 49 KKVTIADIGCGF---------------GGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINV 111 (246)
T ss_dssp CCEEEEEETCTT---------------SHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEE
T ss_pred CCCEEEEEcCCC---------------CHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEE
Confidence 345899999999 999999999876 679999999999999999999887 774 6999
Q ss_pred EEcchhhhHHHHhhcCCCCceeEEEEcCCccc-----------hHHHHHHHHhcccCCeEEEEe
Q 022597 191 KHGLAADSLKALILNGEASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 191 ~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~-----------~~~~~~~~~~lLkpgG~ivid 243 (294)
+.+|+.+.++... +.+++|.|++..+... +..+++.+.++|+|||++++.
T Consensus 112 ~~~D~~~~l~~~~---~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 112 LRGNAMKFLPNFF---EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp EECCTTSCGGGTS---CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccHHHHHHHhc---cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 9999987544321 2578999987643221 368999999999999999883
No 116
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=4.3e-12 Score=121.37 Aligned_cols=103 Identities=12% Similarity=0.142 Sum_probs=87.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC--cEEEEEcch
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH--KVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~--~v~~~~gda 195 (294)
..+.+|||+|||+ |..++.++...| +.+|+++|+++.+++.|+++++.+|+.+ +++++.+|.
T Consensus 221 ~~~~~VLDlGcG~---------------G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~ 284 (375)
T 4dcm_A 221 NLEGEIVDLGCGN---------------GVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 284 (375)
T ss_dssp SCCSEEEEETCTT---------------CHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECST
T ss_pred cCCCeEEEEeCcc---------------hHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechh
Confidence 3447999999999 999999999875 7899999999999999999999999864 588899998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC--------ccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE--------KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~--------~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+.+ ..++||+|+++++ .....++++.+.+.|+|||.+++-
T Consensus 285 ~~~~-------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 285 LSGV-------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TTTC-------CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccC-------CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 7632 1478999999865 223457899999999999999883
No 117
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.33 E-value=8.2e-12 Score=111.72 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH------hCCCCcEEEEE
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER------AGVSHKVKIKH 192 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~------~gl~~~v~~~~ 192 (294)
+..+|||||||+ |..++.++...+ +..++|+|+++++++.|+++++. .++ .+++++.
T Consensus 46 ~~~~vLDiGcG~---------------G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~ 108 (235)
T 3ckk_A 46 AQVEFADIGCGY---------------GGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLR 108 (235)
T ss_dssp CCEEEEEETCTT---------------CHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEE
T ss_pred CCCeEEEEccCC---------------cHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEE
Confidence 445899999999 999999998875 78999999999999999998875 344 4699999
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccc-----------hHHHHHHHHhcccCCeEEEEe
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~-----------~~~~~~~~~~lLkpgG~ivid 243 (294)
+|+.+.++... ..++||.|++...... +..+++.+.+.|+|||.+++.
T Consensus 109 ~d~~~~l~~~~---~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 109 SNAMKHLPNFF---YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CCTTTCHHHHC---CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CcHHHhhhhhC---CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 99987555432 2578999988643111 357999999999999999874
No 118
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.32 E-value=2.5e-12 Score=112.44 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=85.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ +.+++++|+++++++.|+++++..+ +++++.+|+.+.
T Consensus 44 ~~~~vLDiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~ 104 (234)
T 3dtn_A 44 ENPDILDLGAGT---------------GLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKY 104 (234)
T ss_dssp SSCEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTC
T ss_pred CCCeEEEecCCC---------------CHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhcc
Confidence 457999999999 999999999875 7899999999999999999887654 799999999764
Q ss_pred HHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 199 LKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
.. .++||+|+.... ......+++.+.+.|+|||.+++.+...
T Consensus 105 ~~-------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 105 DF-------EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp CC-------CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CC-------CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 21 378999998753 2223468999999999999999877543
No 119
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.32 E-value=1.5e-11 Score=110.80 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=79.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |+.+..++...++.++|+++|+++.+++...+..++. .++.++.+|+..
T Consensus 75 ~~g~~VLDlG~Gt---------------G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~ 136 (232)
T 3id6_C 75 RKGTKVLYLGAAS---------------GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARF 136 (232)
T ss_dssp CTTCEEEEETCTT---------------SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTC
T ss_pred CCCCEEEEEeecC---------------CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEccccc
Confidence 3456999999999 9999999998877899999999999876555544432 469999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHH-HHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFE-LLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~-~~~~lLkpgG~ivid 243 (294)
.... ....++||+||+|.......+.+. .+.+.|||||.+++.
T Consensus 137 ~~~~---~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 137 PQSY---KSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp GGGT---TTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhh---hccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 3210 001468999999987655555554 445599999999986
No 120
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.32 E-value=1.2e-11 Score=120.56 Aligned_cols=125 Identities=16% Similarity=0.232 Sum_probs=101.0
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+....++++..++...++.+|||+|||+ |..+..++..++..++|+++|+++..++.+++++++.
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~---------------G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~ 307 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAP---------------GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM 307 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTT---------------CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCc---------------cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc
Confidence 3444566777777777888999999999 9999999998875589999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc-------------------------hHHHHHHHHhcccCC
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLIRVG 237 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~-------------------------~~~~~~~~~~lLkpg 237 (294)
|+. +++++.+|+.+..+.+ ..++||+|++|++... ...+++.+.++|+||
T Consensus 308 g~~-~v~~~~~D~~~~~~~~----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 308 GIK-IVKPLVKDARKAPEII----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp TCC-SEEEECSCTTCCSSSS----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CCC-cEEEEEcChhhcchhh----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 986 5999999987642211 1268999999875211 157899999999999
Q ss_pred eEEEEecccC
Q 022597 238 GIIVIDNVLW 247 (294)
Q Consensus 238 G~ivid~vl~ 247 (294)
|.+++....+
T Consensus 383 G~lvy~tcs~ 392 (450)
T 2yxl_A 383 GRLLYTTCSI 392 (450)
T ss_dssp EEEEEEESCC
T ss_pred cEEEEEeCCC
Confidence 9999877643
No 121
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=1.4e-11 Score=111.39 Aligned_cols=101 Identities=15% Similarity=0.231 Sum_probs=85.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||+|||+ |..+..++.. +.+|+++|+++.+++.|+++++..|+ +++++.+|+
T Consensus 117 ~~~~~~~vLD~GcG~---------------G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~ 176 (286)
T 3m70_A 117 KIISPCKVLDLGCGQ---------------GRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDI 176 (286)
T ss_dssp HHSCSCEEEEESCTT---------------CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred hccCCCcEEEECCCC---------------CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEecc
Confidence 334778999999999 9999999886 56999999999999999999999887 799999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+... .++||+|+.... .+....+++.+.+.|+|||++++-
T Consensus 177 ~~~~~-------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 177 NAANI-------QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp GGCCC-------CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccc-------cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 76421 478999998653 456779999999999999996663
No 122
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.32 E-value=6.2e-12 Score=109.25 Aligned_cols=122 Identities=12% Similarity=0.009 Sum_probs=87.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.|...+++..+ .+.++.+|||+|||+ |..+.+++.. +.+|+|+|+|+++++.|++..+.
T Consensus 6 ~~~~~l~~~~~~l-~~~~~~~vLD~GCG~---------------G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~ 66 (203)
T 1pjz_A 6 EVNKDLQQYWSSL-NVVPGARVLVPLCGK---------------SQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGE 66 (203)
T ss_dssp SSTHHHHHHHHHH-CCCTTCEEEETTTCC---------------SHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHhc-ccCCCCEEEEeCCCC---------------cHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccC
Confidence 3455544444432 233567999999999 9999999986 57999999999999999987542
Q ss_pred hC-----------CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 182 AG-----------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 182 ~g-----------l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.. ...+++++++|+.+....- .++||+|+.... ......+++.+.++|||||.+++-.+
T Consensus 67 ~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 67 QPHITSQGDFKVYAAPGIEIWCGDFFALTARD-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp CSEEEEETTEEEEECSSSEEEEECCSSSTHHH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CcccccccccccccCCccEEEECccccCCccc-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 10 1347999999997753221 168999986432 33456789999999999998444333
Q ss_pred cC
Q 022597 246 LW 247 (294)
Q Consensus 246 l~ 247 (294)
.+
T Consensus 142 ~~ 143 (203)
T 1pjz_A 142 EY 143 (203)
T ss_dssp SS
T ss_pred ec
Confidence 33
No 123
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=3.5e-12 Score=112.42 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=83.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ .++|+++|+++++++.|+++.+.. .+++++.+|+.+.
T Consensus 74 ~~~~VLDlGcG~---------------G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~ 134 (230)
T 1fbn_A 74 RDSKILYLGASA---------------GTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKP 134 (230)
T ss_dssp TTCEEEEESCCS---------------SHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCG
T ss_pred CCCEEEEEcccC---------------CHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCc
Confidence 456999999999 999999999876 689999999999999999987654 5799999998752
Q ss_pred HHHHhhcCCCCceeEEEEcCC-ccchHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAE-KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
...+. . .++||+|+.+.. +.....+++.+.+.|+|||.+++-
T Consensus 135 ~~~~~--~-~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 135 QEYAN--I-VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp GGGTT--T-SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccc--c-CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 11010 0 368999998754 334577899999999999999986
No 124
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.32 E-value=1.1e-11 Score=109.60 Aligned_cols=117 Identities=15% Similarity=0.250 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 022597 105 PDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV 184 (294)
Q Consensus 105 ~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl 184 (294)
+.....+.......++.+|||+|||+ |..+..++... .+++++|+++++++.|+++++..|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~---------------G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~ 68 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGA---------------GHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV 68 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTT---------------SHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCc---------------CHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34445555666677888999999999 99999888764 5999999999999999999999887
Q ss_pred CCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 185 SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 185 ~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
. +++++.+|+.+. + + ..++||+|+.... ..+...+++.+.+.|+|||.+++.+..
T Consensus 69 ~-~v~~~~~d~~~~-~-~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 69 E-NVRFQQGTAESL-P-F----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp C-SEEEEECBTTBC-C-S----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CeEEEecccccC-C-C----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 6 699999998653 1 1 2478999998743 345788999999999999999986554
No 125
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.32 E-value=6.8e-12 Score=110.77 Aligned_cols=115 Identities=23% Similarity=0.393 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..|.....+...+...++.+|||+|||+ |+.+..++...+ ++|+++|+++++++.|+++++..
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~---------------G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~ 137 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGS---------------GWNAALISEIVK--TDVYTIERIPELVEFAKRNLERA 137 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTT---------------SHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCc---------------CHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHc
Confidence 4566666666666667788999999999 999999999875 78999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.+ +++..+|....++. .++||+|+++....... +.+.+.|+|||.+++.-
T Consensus 138 ~~~~-v~~~~~d~~~~~~~------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 138 GVKN-VHVILGDGSKGFPP------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp TCCS-EEEEESCGGGCCGG------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred CCCC-cEEEECCcccCCCC------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEEE
Confidence 9875 99999997432221 24699999987644332 36788999999999854
No 126
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.32 E-value=9.7e-12 Score=115.30 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=85.0
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH---hCCCCcEEEEEcc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGVSHKVKIKHGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~---~gl~~~v~~~~gd 194 (294)
.++++|||||||+ |..+..+++.. +..+|+++|+|+++++.|++++.. .....+++++.+|
T Consensus 94 ~~~~~VLdiG~G~---------------G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D 157 (304)
T 3bwc_A 94 PKPERVLIIGGGD---------------GGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGD 157 (304)
T ss_dssp SSCCEEEEEECTT---------------SHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred CCCCeEEEEcCCC---------------CHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 3567999999999 99999988753 367999999999999999998853 2234689999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccc-------hHHHHHHHHhcccCCeEEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRM-------YQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~-------~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.+.+... ..++||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 158 ~~~~~~~~----~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 158 GLAFVRQT----PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHHHSS----CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhc----cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 98765421 1578999999875221 1689999999999999999863
No 127
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.31 E-value=5.3e-12 Score=113.22 Aligned_cols=107 Identities=22% Similarity=0.252 Sum_probs=90.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..++...| +.+++++|+++.+++.|+++++..|+. +++++.+|+.+
T Consensus 36 ~~~~~vLDiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~ 98 (276)
T 3mgg_A 36 PPGAKVLEAGCGI---------------GAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFS 98 (276)
T ss_dssp CTTCEEEETTCTT---------------SHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGG
T ss_pred CCCCeEEEecCCC---------------CHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEccccc
Confidence 4567999999999 999999999865 689999999999999999999998886 69999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 198 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
... ..++||+|+.... ..+...+++.+.++|+|||++++.+..+
T Consensus 99 ~~~------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 99 LPF------EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp CCS------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred CCC------CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 421 2578999998653 3456789999999999999999976533
No 128
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.30 E-value=8.5e-12 Score=109.85 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=83.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+++++|+++|+++++++.+.++.+.. .+++++.+|+.+.
T Consensus 77 ~~~~vLDlG~G~---------------G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~ 138 (233)
T 2ipx_A 77 PGAKVLYLGAAS---------------GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHP 138 (233)
T ss_dssp TTCEEEEECCTT---------------SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCG
T ss_pred CCCEEEEEcccC---------------CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCCh
Confidence 456999999999 9999999998755689999999999988888887764 5799999999763
Q ss_pred H--HHHhhcCCCCceeEEEEcCCcc-chHHHHHHHHhcccCCeEEEEe
Q 022597 199 L--KALILNGEASSYDFAFVDAEKR-MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l--~~l~~~~~~~~fD~vfiD~~~~-~~~~~~~~~~~lLkpgG~ivid 243 (294)
. +.. .++||+|+.|.... ....+++.+.+.|+|||.+++.
T Consensus 139 ~~~~~~-----~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 139 HKYRML-----IAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp GGGGGG-----CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhccc-----CCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 211 47899999987633 2355688899999999999994
No 129
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.30 E-value=5.2e-12 Score=113.92 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=86.6
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.++.+|||+|||+ |+.+..++....++|+|+++|+++++++.++++.++. .++..+.+|+.
T Consensus 75 ikpG~~VldlG~G~---------------G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~ 136 (233)
T 4df3_A 75 VKEGDRILYLGIAS---------------GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDAR 136 (233)
T ss_dssp CCTTCEEEEETCTT---------------SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTT
T ss_pred CCCCCEEEEecCcC---------------CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEecc
Confidence 45667999999999 9999999999988999999999999999998877653 36899999886
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-ccchHHHHHHHHhcccCCeEEEEe
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+.... ....+++|+||.|.. ......++..+.+.|||||.+++.
T Consensus 137 ~p~~~---~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 137 FPEKY---RHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CGGGG---TTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ccccc---ccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 53211 112578999999876 344667889999999999999875
No 130
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.30 E-value=2.7e-11 Score=118.28 Aligned_cols=124 Identities=18% Similarity=0.175 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHH-------H
Q 022597 104 SPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVA-------K 176 (294)
Q Consensus 104 ~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A-------~ 176 (294)
.|.....+...+...++.+|||+|||+ |+.++.++...+ ..+|+|+|+++++++.| +
T Consensus 227 ~p~~v~~ml~~l~l~~g~~VLDLGCGs---------------G~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar 290 (433)
T 1u2z_A 227 LPNFLSDVYQQCQLKKGDTFMDLGSGV---------------GNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELK 290 (433)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEESCTT---------------SHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCCCCEEEEeCCCc---------------CHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHH
Confidence 355444444445566778999999999 999999999764 46899999999999999 8
Q ss_pred HHHHHhCCC-CcEEEEEcchhhh---HHHHhhcCCCCceeEEEEcC--CccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 177 KYYERAGVS-HKVKIKHGLAADS---LKALILNGEASSYDFAFVDA--EKRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 177 ~~~~~~gl~-~~v~~~~gda~~~---l~~l~~~~~~~~fD~vfiD~--~~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
++++..|+. ++++++++|.... ++.. .++||+|++.. ...+....++.+.+.|+|||.+++.+.+.+
T Consensus 291 ~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~-----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 291 KRCKLYGMRLNNVEFSLKKSFVDNNRVAEL-----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp HHHHHTTBCCCCEEEEESSCSTTCHHHHHH-----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred HHHHHcCCCCCceEEEEcCccccccccccc-----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 899888864 6899999865421 2222 36899999863 235677888999999999999999876543
No 131
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.29 E-value=2.7e-11 Score=110.78 Aligned_cols=189 Identities=14% Similarity=0.156 Sum_probs=122.2
Q ss_pred ChhHHHHHHhc-CCChHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HHHhh--hCCCeEEEEccccccccccccccccC
Q 022597 69 TPPLYDYILRN-VREPEILRQLREETAGMRGSQMQVSPDQAQLLA--MLVQI--LGAQRCIEVGVYTVCVSSYSTSILSL 143 (294)
Q Consensus 69 ~~~l~~Y~~~~-~~~~~~L~~~~~~~~~~~~~~~~v~~~~~~lL~--~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~ 143 (294)
.+++.+|+..+ .++++.|+.+.... -....+.+++ .+.+. .-+..++|+||+.
T Consensus 23 ~~~l~~~~~~~~~~~~e~l~~~~~~~---------~~~~l~~~l~~~~l~~~i~~vpG~ivE~GV~r------------- 80 (257)
T 3tos_A 23 TQRLTKLLTNSPIPTEELVNNLPLFL---------RRHQMTDLLSMDALYRQVLDVPGVIMEFGVRF------------- 80 (257)
T ss_dssp HHHHHHHHHTCCSCGGGGGGCGGGGC---------CHHHHHHHHHHHHHHHHTTTSCSEEEEECCTT-------------
T ss_pred HHHHHHHHhcCCCChHHHHHhHHhhh---------hHHHHHHHHHHHHHHHHhhCCCCeEEEEeccc-------------
Confidence 35667777776 34445554332111 1122333333 22222 3356999999999
Q ss_pred CCcHHHHHHHHHC------CCCcEEEEEe-----CChH-------------------HHHHHHH------HHHHhCC-CC
Q 022597 144 FSGYSSLAIALVL------PESGCLVACE-----RDAR-------------------SLEVAKK------YYERAGV-SH 186 (294)
Q Consensus 144 ~aG~~sl~la~~~------~~~~~v~~id-----~~~~-------------------~~~~A~~------~~~~~gl-~~ 186 (294)
|.+...++... ..+.+|+++| ..+. ..+..++ +.+..|. .+
T Consensus 81 --G~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~ 158 (257)
T 3tos_A 81 --GRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQ 158 (257)
T ss_dssp --CHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCC
T ss_pred --CHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCC
Confidence 99988876531 2367899999 3220 1111222 2224565 48
Q ss_pred cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-cchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHH
Q 022597 187 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIR 265 (294)
Q Consensus 187 ~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir 265 (294)
+++++.|++.+.++.+....+..+||+||+|+++ ..+..+++.+.++|+|||+|++||+.+++. . ..+.|++
T Consensus 159 ~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w------~-G~~~A~~ 231 (257)
T 3tos_A 159 RSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPKW------P-GENIAMR 231 (257)
T ss_dssp SEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTTC------T-HHHHHHH
T ss_pred cEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCCC------h-HHHHHHH
Confidence 9999999999999987665556789999999986 457788999999999999999999843221 0 2234455
Q ss_pred HHHHHhhhCCCeEEEEeecCCceEEEE
Q 022597 266 NFNKNLMEDERVSISMVPIGDGMTICQ 292 (294)
Q Consensus 266 ~f~~~l~~~~~~~~~~lp~gdGl~i~~ 292 (294)
+| ..+..+....+|++.+....+
T Consensus 232 ef----~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 232 KV----LGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp HH----TCTTSSCCEECTTCSCCEEEE
T ss_pred HH----HhhCCCeEEEccCCCCCEEEE
Confidence 44 356677788889888776543
No 132
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.29 E-value=4.8e-12 Score=109.31 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=85.8
Q ss_pred HHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEE
Q 022597 110 LLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVK 189 (294)
Q Consensus 110 lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~ 189 (294)
++..+....++.+|||+|||+ |..+..++.. +.+|+++|+++++++.|++++...+ +++
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~ 100 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAA---------------GAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HIS 100 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTT---------------SHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEE
T ss_pred HHHHHcccCCCCcEEEEcCCC---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeE
Confidence 333344445567999999999 9999998876 3699999999999999999887643 799
Q ss_pred EEEcchhhhHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 190 IKHGLAADSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 190 ~~~gda~~~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
++.+|+.+.. ..++||+|+.... ......+++.+.++|+|||++++...
T Consensus 101 ~~~~d~~~~~-------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 101 WAATDILQFS-------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEECCTTTCC-------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcchhhCC-------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 9999997653 1579999998643 23346789999999999999998653
No 133
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.29 E-value=4e-12 Score=112.20 Aligned_cols=115 Identities=20% Similarity=0.217 Sum_probs=87.8
Q ss_pred HHHHHHHHhhh----CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC
Q 022597 108 AQLLAMLVQIL----GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 183 (294)
Q Consensus 108 ~~lL~~l~~~~----~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g 183 (294)
..++..++... ++.+|||||||+ |..+..++... ..+|+++|+++++++.|++++...+
T Consensus 64 ~~~~~~l~~~~~~~~~~~~vLDiGcG~---------------G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~ 126 (241)
T 2ex4_A 64 RKFLQRFLREGPNKTGTSCALDCGAGI---------------GRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG 126 (241)
T ss_dssp HHHHHGGGC----CCCCSEEEEETCTT---------------THHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG
T ss_pred HHHHHHHHHhcccCCCCCEEEEECCCC---------------CHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC
Confidence 34444444332 467999999999 99988887754 4699999999999999999988765
Q ss_pred CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 184 VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 184 l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
..+++++.+|+.+... ..++||+|++... ...+..+++.+.++|+|||.+++.+..
T Consensus 127 -~~~~~~~~~d~~~~~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 127 -KRVRNYFCCGLQDFTP------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp -GGEEEEEECCGGGCCC------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CceEEEEEcChhhcCC------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 3469999999865421 1458999998754 233568999999999999999985543
No 134
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.29 E-value=2.7e-11 Score=116.13 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=90.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh---------------
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--------------- 182 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--------------- 182 (294)
.++.+|||+|||+ |..++.++...+ +.+|+++|++++.++.+++|++.+
T Consensus 46 ~~~~~VLDl~aGt---------------G~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 46 LNPKIVLDALSAT---------------GIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp HCCSEEEESSCTT---------------SHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred cCCCEEEECCCch---------------hHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 4678999999999 999999999875 568999999999999999999999
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|+.+ ++++++|+.+.+... .++||+|++|++ ....++++.+.+.|++||++++..
T Consensus 110 gl~~-i~v~~~Da~~~~~~~-----~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 110 GEKT-IVINHDDANRLMAER-----HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp SSSE-EEEEESCHHHHHHHS-----TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCc-eEEEcCcHHHHHHhc-----cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 8865 999999998876654 468999999984 334788999999999999988754
No 135
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=2.6e-11 Score=107.07 Aligned_cols=99 Identities=16% Similarity=0.273 Sum_probs=82.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++.. +.+|+++|+++++++.|+++++..+. +++++.+|+.+.
T Consensus 41 ~~~~vLDlGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~ 100 (252)
T 1wzn_A 41 EVRRVLDLACGT---------------GIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEI 100 (252)
T ss_dssp CCCEEEEETCTT---------------CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGC
T ss_pred CCCEEEEeCCCC---------------CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhc
Confidence 456999999999 9999998875 57999999999999999999998776 599999999764
Q ss_pred HHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEec
Q 022597 199 LKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. . .++||+|++... ......+++.+.+.|+|||.++++-
T Consensus 101 ~--~-----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 101 A--F-----KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp C--C-----CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--c-----CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1 1 468999987422 2456788999999999999999864
No 136
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.29 E-value=1.3e-11 Score=108.24 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=86.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++. .+.+|+++|+++.+++.|+++++..+...+++++.+|+.+.
T Consensus 66 ~~~~vLDiGcG~---------------G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 127 (235)
T 3lcc_A 66 PLGRALVPGCGG---------------GHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTW 127 (235)
T ss_dssp CCEEEEEETCTT---------------CHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTC
T ss_pred CCCCEEEeCCCC---------------CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcC
Confidence 456999999999 999988865 36899999999999999999998877777899999999764
Q ss_pred HHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 199 LKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
. ..++||+|+.... ......+++.+.++|+|||.+++....
T Consensus 128 ~-------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 128 R-------PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp C-------CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred C-------CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 2 1468999987532 447789999999999999999986553
No 137
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.28 E-value=8.7e-11 Score=122.21 Aligned_cols=154 Identities=10% Similarity=0.109 Sum_probs=111.4
Q ss_pred HHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh------CC
Q 022597 111 LAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA------GV 184 (294)
Q Consensus 111 L~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~------gl 184 (294)
+...+...++.+|||||||+ |..+..++...++..+|+++|+++++++.|+++++.. |+
T Consensus 713 LLelL~~~~g~rVLDVGCGT---------------G~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl 777 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGS---------------GSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV 777 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSS---------------SHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHhcccCCCEEEEECCCC---------------CHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC
Confidence 34444555788999999999 9999999987644589999999999999999987753 44
Q ss_pred CCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc------cCCCc---
Q 022597 185 SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV------LWHGK--- 250 (294)
Q Consensus 185 ~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v------l~~g~--- 250 (294)
. +++++++|+.+... ..++||+|+.... ......+++.+.+.|+|| .+++... ++.+.
T Consensus 778 ~-nVefiqGDa~dLp~------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~ 849 (950)
T 3htx_A 778 K-SATLYDGSILEFDS------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPE 849 (950)
T ss_dssp S-EEEEEESCTTSCCT------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC---
T ss_pred C-ceEEEECchHhCCc------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccc
Confidence 3 79999999976422 1578999987643 223446889999999999 6666432 22221
Q ss_pred -------------ccCcccC-CcchHHHHHHHHHhhhCCCeEEEEeecCCc
Q 022597 251 -------------VADQMVN-DAKTISIRNFNKNLMEDERVSISMVPIGDG 287 (294)
Q Consensus 251 -------------v~~~~~~-~~~~~~ir~f~~~l~~~~~~~~~~lp~gdG 287 (294)
...+... ......++.+.+.+.+..++.+.+.++|||
T Consensus 850 tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 850 TQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp ---------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred cccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 0000000 112245677777788889999999999998
No 138
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.28 E-value=1.6e-11 Score=107.79 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=79.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ +++|+++|+++++++.+.+..+.. .++.++.+|+.+.
T Consensus 57 ~g~~VLDlGcGt---------------G~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~ 117 (210)
T 1nt2_A 57 GDERVLYLGAAS---------------GTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKP 117 (210)
T ss_dssp SSCEEEEETCTT---------------SHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCG
T ss_pred CCCEEEEECCcC---------------CHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCc
Confidence 445999999999 999999999887 789999999999887777666542 3688888888653
Q ss_pred HHHHhhcCCCCceeEEEEcCCccc-hHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAEKRM-YQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~-~~~~~~~~~~lLkpgG~ivid 243 (294)
.... ...++||+|+.+..... ...+++.+.+.|||||.+++.
T Consensus 118 ~~~~---~~~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 118 WKYS---GIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp GGTT---TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhc---ccccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1100 01378999999865433 344589999999999999987
No 139
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.28 E-value=1.1e-11 Score=117.89 Aligned_cols=118 Identities=22% Similarity=0.278 Sum_probs=93.3
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh-----C-CC-CcEE
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-----G-VS-HKVK 189 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~-----g-l~-~~v~ 189 (294)
..++.+|||+|||+ |..+..++...+++++|+++|+++++++.|+++++.. | +. .+++
T Consensus 81 ~~~~~~VLDlGcG~---------------G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~ 145 (383)
T 4fsd_A 81 SLEGATVLDLGCGT---------------GRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVR 145 (383)
T ss_dssp GGTTCEEEEESCTT---------------SHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEE
T ss_pred CCCCCEEEEecCcc---------------CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceE
Confidence 44677999999999 9999999998765789999999999999999998876 4 32 5799
Q ss_pred EEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 190 IKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 190 ~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
++.+|+.+...........++||+|+.... ..+...+++.+.++|+|||++++.++....
T Consensus 146 ~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 146 FLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp EEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred EEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccc
Confidence 999999764210000112578999998754 345789999999999999999998775543
No 140
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.28 E-value=1.3e-11 Score=110.33 Aligned_cols=115 Identities=13% Similarity=0.131 Sum_probs=89.0
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChH------HHHHHHHHHHHhCCCCcE
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDAR------SLEVAKKYYERAGVSHKV 188 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~------~~~~A~~~~~~~gl~~~v 188 (294)
+...++.+|||||||+ |..+..++...++.++|+++|++++ +++.|+++++..++.+++
T Consensus 39 ~~~~~~~~vLDiGcG~---------------G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v 103 (275)
T 3bkx_A 39 WQVKPGEKILEIGCGQ---------------GDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRL 103 (275)
T ss_dssp HTCCTTCEEEEESCTT---------------SHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGE
T ss_pred cCCCCCCEEEEeCCCC---------------CHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCce
Confidence 3445678999999999 9999999998654689999999997 999999999999887889
Q ss_pred EEEEcc-hhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 189 KIKHGL-AADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 189 ~~~~gd-a~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
+++.+| .......+ ..++||+|+.... ..+...+++.+..+++|||.+++.+....
T Consensus 104 ~~~~~d~~~~~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 104 TVHFNTNLSDDLGPI----ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEECSCCTTTCCGGG----TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEECChhhhccCCC----CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 999998 32110011 1478999998653 23345577777788888999999876543
No 141
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.28 E-value=1e-11 Score=109.81 Aligned_cols=105 Identities=9% Similarity=0.112 Sum_probs=87.1
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||+|||+ |..+..++... +.+|+++|+++++++.|+++.+.. .+++++.+|+.
T Consensus 53 ~~~~~~vLdiG~G~---------------G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~ 112 (266)
T 3ujc_A 53 LNENSKVLDIGSGL---------------GGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDIL 112 (266)
T ss_dssp CCTTCEEEEETCTT---------------SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTT
T ss_pred CCCCCEEEEECCCC---------------CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccc
Confidence 34567999999999 99999999976 579999999999999999877654 57999999997
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
+.. .+.++||+|+.... ..+...+++.+.+.|+|||.+++.+...
T Consensus 113 ~~~------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 113 TKE------FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp TCC------CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cCC------CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 641 12579999998643 2667899999999999999999987643
No 142
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.27 E-value=8.9e-12 Score=108.58 Aligned_cols=107 Identities=10% Similarity=0.130 Sum_probs=85.5
Q ss_pred HHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcE
Q 022597 109 QLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKV 188 (294)
Q Consensus 109 ~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v 188 (294)
.++..+....++.+|||||||+ |..+..++... .+|+++|+++++++.|++.+.. ++
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~---------------G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v 88 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFK---------------GDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GI 88 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTT---------------SHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CE
T ss_pred HHHHHHHhhcCCCcEEEECCCC---------------CHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----Ce
Confidence 3444444456778999999999 99998888753 4899999999999999987643 69
Q ss_pred EEEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHH-hcccCCeEEEEecc
Q 022597 189 KIKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLL-QLIRVGGIIVIDNV 245 (294)
Q Consensus 189 ~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~-~lLkpgG~ivid~v 245 (294)
+++.+|+.+.. ..++||+|++... ..+...+++.+. +.|+|||.+++...
T Consensus 89 ~~~~~d~~~~~-------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 89 TYIHSRFEDAQ-------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EEEESCGGGCC-------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEccHHHcC-------cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 99999997651 1578999998643 235688999999 99999999999664
No 143
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.27 E-value=1.6e-11 Score=111.05 Aligned_cols=121 Identities=13% Similarity=0.018 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
...|...+++..+....++.+|||+|||+ |..+.+++.. +.+|+|||+|+.+++.|++....
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG~---------------G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~ 112 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCGK---------------AIEMKWFADR---GHTVVGVEISEIGIREFFAEQNL 112 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCTT---------------CTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCCC---------------cHHHHHHHHC---CCeEEEEECCHHHHHHHHHhccc
Confidence 45666555555544334678999999999 9999999985 57999999999999999765431
Q ss_pred ----------hC------CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEE
Q 022597 182 ----------AG------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDA-----EKRMYQEYFELLLQLIRVGGII 240 (294)
Q Consensus 182 ----------~g------l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~-----~~~~~~~~~~~~~~lLkpgG~i 240 (294)
.+ ...+++++++|+.+.... ..++||+|+... +......+++.+.++|+|||.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~-----~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 113 SYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA-----NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp CEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG-----CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEE
T ss_pred ccccccccccccccccccCCCceEEEECccccCCcc-----cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEE
Confidence 00 135799999999875321 127899998542 2445678999999999999999
Q ss_pred EEecc
Q 022597 241 VIDNV 245 (294)
Q Consensus 241 vid~v 245 (294)
++-.+
T Consensus 188 ~l~~~ 192 (252)
T 2gb4_A 188 LVAVL 192 (252)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65433
No 144
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.27 E-value=9.7e-12 Score=119.98 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=90.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc-EEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK-VKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~-v~~~~gda~~ 197 (294)
++.+|||++||+ |..++.++...+...+|+++|++++.++.+++|++.+|+.++ ++++.+|+.+
T Consensus 52 ~g~~VLDlfaGt---------------G~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~ 116 (392)
T 3axs_A 52 RPVKVADPLSAS---------------GIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF 116 (392)
T ss_dssp SCEEEEESSCTT---------------SHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred CCCEEEECCCcc---------------cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 456999999999 999999998765337899999999999999999999999887 9999999988
Q ss_pred hHH-HHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 198 SLK-ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~-~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.++ .+ .++||+||+|+ .....++++.+.++|++||++++.-
T Consensus 117 ~l~~~~-----~~~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 117 FLRKEW-----GFGFDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp HHHSCC-----SSCEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhh-----CCCCcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 776 54 46899999998 3334678999999999999988743
No 145
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.27 E-value=2.3e-11 Score=116.71 Aligned_cols=115 Identities=20% Similarity=0.312 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHHhhh-----CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 103 VSPDQAQLLAMLVQIL-----GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~-----~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
..+....++..+.... ++.+|||+|||+ |..++.++.. +.+|+++|+|+.+++.|++
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~---------------G~~~~~la~~---g~~V~gvDis~~al~~A~~ 273 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDLGAGY---------------GALTLPLARM---GAEVVGVEDDLASVLSLQK 273 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTT---------------STTHHHHHHT---TCEEEEEESBHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeC---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHH
Confidence 4566666676666544 567999999999 9999999986 5799999999999999999
Q ss_pred HHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--------ccchHHHHHHHHhcccCCeEEEEe
Q 022597 178 YYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE--------KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 178 ~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--------~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+++.+++. ++++.+|+.+.... .++||+|+++++ ......+++.+.+.|+|||.+++-
T Consensus 274 n~~~~~~~--v~~~~~D~~~~~~~------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 274 GLEANALK--AQALHSDVDEALTE------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp HHHHTTCC--CEEEECSTTTTSCT------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHcCCC--eEEEEcchhhcccc------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99998875 89999999765321 379999999854 234678999999999999999884
No 146
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.27 E-value=1.9e-11 Score=110.16 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=88.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|+|||||+ |+.++.++...+ ..+|+++|+++..++.|+++++.+|+.++++++++|..+.
T Consensus 21 ~g~~VlDIGtGs---------------G~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 21 KGARLLDVGSDH---------------AYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp TTEEEEEETCST---------------THHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred CCCEEEEECCch---------------HHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc
Confidence 445999999999 999999998643 6789999999999999999999999999999999999876
Q ss_pred HHHHhhcCCCCceeEEEEc-CCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVD-AEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD-~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.. .++||.|++. .+..-..++++...+.|+++|.+|+..+
T Consensus 85 ~~~------~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 85 FEE------ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CCG------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccc------ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 431 2379998764 3445578888888899999999998765
No 147
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.26 E-value=7.1e-11 Score=106.74 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 022597 105 PDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV 184 (294)
Q Consensus 105 ~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl 184 (294)
....+.+..++...++.+|||||||+ |..+..++.. +.+|+++|+++++++.|+++....+.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~ 104 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGT---------------GVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRK 104 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCC---------------CHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhccc
Confidence 34445666666667788999999999 9999999886 45999999999999999998765443
Q ss_pred C---CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcC-C---c-------cchHHHHHHHHhcccCCeEEEEec
Q 022597 185 S---HKVKIKHGLAADSLKALILNGEASSYDFAFVDA-E---K-------RMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 185 ~---~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~-~---~-------~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. .++.+..+|+.+....+ ...++||+|++.. . . .....+++.+.+.|+|||++++..
T Consensus 105 ~~~~~~~~~~~~d~~~~~~~~---~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 105 EPAFDKWVIEEANWLTLDKDV---PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp SHHHHTCEEEECCGGGHHHHS---CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccceeeEeecChhhCcccc---ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 46889999987754332 1257999999852 1 2 237889999999999999999864
No 148
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=1.9e-11 Score=106.75 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
..|.....+...+...++.+|||+|||+ |..+..++... .+|+++|+++++++.|+++++..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~ 115 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGI---------------GYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY 115 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCC---------------CHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc
Confidence 3444444444444555677999999999 99999999874 79999999999999999999876
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+ +++++.+|+.+.++. .++||+|+++....... +.+.+.|+|||.+++..
T Consensus 116 ~---~v~~~~~d~~~~~~~------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 116 N---NIKLILGDGTLGYEE------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp S---SEEEEESCGGGCCGG------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred C---CeEEEECCccccccc------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEE
Confidence 6 799999998763221 47899999987544332 46788999999999864
No 149
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.26 E-value=3.9e-11 Score=113.29 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=91.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..+++..| +.+++++|+ +++++.|+++++..|+.++++++.+|+.+
T Consensus 178 ~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (363)
T 3dp7_A 178 HHPKRLLDIGGNT---------------GKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLD 240 (363)
T ss_dssp GCCSEEEEESCTT---------------CHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCS
T ss_pred cCCCEEEEeCCCc---------------CHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccc
Confidence 5778999999999 999999999986 679999999 99999999999999988899999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 198 SLKALILNGEASSYDFAFVDA-----EKRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~-----~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
.-..+ .++||+|++.. +.+....+++.+.+.|+|||.+++.+..+..
T Consensus 241 ~~~~~-----p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 241 RDVPF-----PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SSCCC-----CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred cCCCC-----CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 30001 36899998742 2344568899999999999999887766554
No 150
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=2.3e-11 Score=104.41 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=87.6
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
..++..+....++.+|||+|||+ |..+..++.. +.+++++|+++++++.|++ .+. .+
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~ 91 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGT---------------GYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DN 91 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTT---------------SHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TT
T ss_pred HHHHHHHhcCCCCCeEEEECCCC---------------CHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CC
Confidence 44555555566678999999999 9999999987 5799999999999999988 454 46
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
++++.+|+.+.. ..++||+|+.... .+....+++.+.+.|+|||.+++.+..
T Consensus 92 ~~~~~~d~~~~~-------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 92 VEFRQQDLFDWT-------PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EEEEECCTTSCC-------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEecccccCC-------CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999999997651 2589999998653 222578999999999999999987653
No 151
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.26 E-value=3.3e-11 Score=115.14 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=85.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC---CCC----cEEEE
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---VSH----KVKIK 191 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g---l~~----~v~~~ 191 (294)
++++||+||+|+ |..+..+++.. ..+|++||+|++.++.|++++...+ +.+ +++++
T Consensus 188 ~pkrVL~IGgG~---------------G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi 250 (364)
T 2qfm_A 188 TGKDVLILGGGD---------------GGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL 250 (364)
T ss_dssp TTCEEEEEECTT---------------CHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE
T ss_pred CCCEEEEEECCh---------------hHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEE
Confidence 467999999999 99998888753 3899999999999999999986432 332 79999
Q ss_pred EcchhhhHHHHhhcCCCCceeEEEEcCCc-c--------chHHHHHHH----HhcccCCeEEEEecc
Q 022597 192 HGLAADSLKALILNGEASSYDFAFVDAEK-R--------MYQEYFELL----LQLIRVGGIIVIDNV 245 (294)
Q Consensus 192 ~gda~~~l~~l~~~~~~~~fD~vfiD~~~-~--------~~~~~~~~~----~~lLkpgG~ivid~v 245 (294)
.+|+.+.++..... .++||+||+|+.. + ...++++.+ .+.|+|||++++...
T Consensus 251 ~~Da~~~L~~~~~~--~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 251 IEDCIPVLKRYAKE--GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp ESCHHHHHHHHHHH--TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECcHHHHHHhhhcc--CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 99999998764211 4789999999753 1 235666666 899999999998743
No 152
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.26 E-value=2.8e-11 Score=103.46 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=84.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++.. +.+++++|+++++++.|+++++..+. ++++..+|+.+.
T Consensus 29 ~~~~vLdiGcG~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~ 88 (202)
T 2kw5_A 29 PQGKILCLAEGE---------------GRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADF 88 (202)
T ss_dssp CSSEEEECCCSC---------------THHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTB
T ss_pred CCCCEEEECCCC---------------CHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhc
Confidence 333999999999 9999888875 57999999999999999999998876 699999998764
Q ss_pred HHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 199 LKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
. + ..++||+|+.... ......+++.+.++|+|||.+++....
T Consensus 89 ~--~----~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 89 D--I----VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp S--C----CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred C--C----CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 1 1 2478999987532 345788999999999999999997654
No 153
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.25 E-value=9.2e-12 Score=109.22 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=83.5
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-----CcEEEEEeCChHHHHHHHHHHHHhCC----CCc
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-----SGCLVACERDARSLEVAKKYYERAGV----SHK 187 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-----~~~v~~id~~~~~~~~A~~~~~~~gl----~~~ 187 (294)
..++.+|||+|||+ |+.+..++...+. .++|+++|+++++++.|+++++..+. .++
T Consensus 82 ~~~~~~VLdiG~G~---------------G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 82 LKPGARILDVGSGS---------------GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CCTTCEEEEESCTT---------------SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCc---------------cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 44567999999999 9999999986542 36999999999999999999988762 346
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++++.+|..+.++. .++||+|+++..... +.+.+.+.|+|||.+++.-
T Consensus 147 v~~~~~d~~~~~~~------~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 147 LLIVEGDGRKGYPP------NAPYNAIHVGAAAPD---TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEEESCGGGCCGG------GCSEEEEEECSCBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred eEEEECCcccCCCc------CCCccEEEECCchHH---HHHHHHHHhcCCCEEEEEE
Confidence 99999998763221 368999999876543 3367889999999999863
No 154
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.25 E-value=1.5e-11 Score=115.92 Aligned_cols=107 Identities=17% Similarity=0.180 Sum_probs=89.3
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
....++++|||+|||+ |..++.+++. + ..+|+++|++ ++++.|+++++.+|+.++++++.+|
T Consensus 62 ~~~~~~~~VLDvGcG~---------------G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d 123 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGT---------------GILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGK 123 (349)
T ss_dssp HHHHTTCEEEEESCTT---------------SHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESC
T ss_pred cccCCCCEEEEEeccc---------------hHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECc
Confidence 3456788999999999 9999999986 2 5699999999 4999999999999999999999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcC------CccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDA------EKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~------~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+.. + +.++||+|+.+. .......+++.+.++|+|||+++.+..
T Consensus 124 ~~~~~--~----~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 124 VEEVE--L----PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp TTTCC--C----SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred HHHcc--C----CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 98751 1 147999999864 235677888999999999999986544
No 155
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.25 E-value=2.2e-11 Score=110.57 Aligned_cols=105 Identities=10% Similarity=0.139 Sum_probs=88.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|+|||||+ |+.++.++...+ ..+|+++|+++..++.|+++++.+|+.++|+++++|..+.
T Consensus 21 ~g~~VlDIGtGs---------------G~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~ 84 (244)
T 3gnl_A 21 KNERIADIGSDH---------------AYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV 84 (244)
T ss_dssp SSEEEEEETCST---------------THHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred CCCEEEEECCcc---------------HHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc
Confidence 446999999999 999999998643 6789999999999999999999999999999999999876
Q ss_pred HHHHhhcCCCCceeEEEE-cCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFV-DAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfi-D~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.. .++||.|++ ..+..-..++++.....|+++|.+|+..+
T Consensus 85 ~~~------~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 85 IEK------KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp CCG------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cCc------cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 421 135999875 34455678889999999999999998765
No 156
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.25 E-value=2.8e-11 Score=105.61 Aligned_cols=109 Identities=12% Similarity=0.167 Sum_probs=87.1
Q ss_pred HHHHHHHHhhh--CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 108 AQLLAMLVQIL--GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 108 ~~lL~~l~~~~--~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
.+.+..++... ++.+|||+|||+ |..+..++.. +.+++++|+++++++.|++++...+.
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~- 84 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGT---------------GNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL- 84 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTT---------------STTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCC---------------CHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-
Confidence 33344444333 567999999999 9999888876 46899999999999999999998776
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcC-C------ccchHHHHHHHHhcccCCeEEEEe
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDA-E------KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~-~------~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+++++.+|+.+.. + .++||+|+... . ......+++.+.+.|+|||.++++
T Consensus 85 -~~~~~~~d~~~~~--~-----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 85 -KPRLACQDISNLN--I-----NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -CCEEECCCGGGCC--C-----SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -CeEEEecccccCC--c-----cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6899999987641 1 37899999865 2 245788999999999999999985
No 157
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.25 E-value=1.5e-11 Score=105.28 Aligned_cols=116 Identities=15% Similarity=0.169 Sum_probs=90.1
Q ss_pred HHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 106 DQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 106 ~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
...+++..+....++.+|||+|||+ |..++.++... +.+++++|+++++++.|+++++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~vLDiGcG~---------------G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-- 70 (209)
T 2p8j_A 10 QLYRFLKYCNESNLDKTVLDCGAGG---------------DLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-- 70 (209)
T ss_dssp HHHHHHHHHHHSSSCSEEEEESCCS---------------SSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT--
T ss_pred hHHHHHHHHhccCCCCEEEEECCCC---------------CHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC--
Confidence 3455666666666678999999999 88755555442 5799999999999999999998877
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+++++.+|+.+.. + +.++||+|+.... ..+...+++.+.+.|+|||.+++....
T Consensus 71 ~~~~~~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 71 FKLNISKGDIRKLP--F----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp CCCCEEECCTTSCC--S----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CceEEEECchhhCC--C----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 36889999987531 1 2478999997532 256788999999999999999997653
No 158
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.25 E-value=6.4e-12 Score=111.91 Aligned_cols=121 Identities=17% Similarity=0.157 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHhhh-----CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 105 PDQAQLLAMLVQIL-----GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 105 ~~~~~lL~~l~~~~-----~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
++...++..++... ++.+|||+|||+ |..++.++...+ +++|+++|+++++++.|++++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~---------------G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~ 109 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGA---------------SCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNV 109 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTT---------------TTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCh---------------hHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHH
Confidence 55666666666543 356999999999 999999888764 589999999999999999999
Q ss_pred HHhCCCCcEEEEEcchhhh-HHHHhhcCCCCceeEEEEcCCccc------------------hHHHHHHHHhcccCCeEE
Q 022597 180 ERAGVSHKVKIKHGLAADS-LKALILNGEASSYDFAFVDAEKRM------------------YQEYFELLLQLIRVGGII 240 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~-l~~l~~~~~~~~fD~vfiD~~~~~------------------~~~~~~~~~~lLkpgG~i 240 (294)
+.+|+.++++++++|+.+. ...+.. ...++||+|+.+++-.. ...++..+.++|+|||.+
T Consensus 110 ~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l 188 (254)
T 2h00_A 110 EQNNLSDLIKVVKVPQKTLLMDALKE-ESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGEL 188 (254)
T ss_dssp HHTTCTTTEEEEECCTTCSSTTTSTT-CCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHH
T ss_pred HHcCCCccEEEEEcchhhhhhhhhhc-ccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEE
Confidence 9999988899999997652 222210 00158999999854110 112344556677777765
Q ss_pred EE
Q 022597 241 VI 242 (294)
Q Consensus 241 vi 242 (294)
.+
T Consensus 189 ~~ 190 (254)
T 2h00_A 189 EF 190 (254)
T ss_dssp HH
T ss_pred EE
Confidence 44
No 159
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.24 E-value=2.4e-10 Score=105.30 Aligned_cols=107 Identities=16% Similarity=0.269 Sum_probs=89.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++...| +.+++++|++ ++++.|+++++..|+.++++++.+|..+
T Consensus 164 ~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 226 (335)
T 2r3s_A 164 IEPLKVLDISASH---------------GLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFE 226 (335)
T ss_dssp CCCSEEEEETCTT---------------CHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT
T ss_pred CCCCEEEEECCCc---------------CHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccccc
Confidence 5668999999999 999999999886 6799999999 9999999999999998899999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
. .+ .+.||+|++... .+....+++.+.+.|+|||.+++.+...+
T Consensus 227 ~--~~-----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 227 V--DY-----GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp S--CC-----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred C--CC-----CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 3 11 345999998432 34567899999999999998877665443
No 160
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.24 E-value=2.1e-11 Score=116.26 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=87.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|||+|||+ |..++.+++.. ..+|+++|++ ++++.|+++++.+|+.++++++++|+.+
T Consensus 62 ~~~~~VLDlGcGt---------------G~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 62 FEGKTVLDVGTGS---------------GILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp TTTCEEEEESCTT---------------THHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CCCCEEEEeccCc---------------CHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh
Confidence 4567999999999 99999998862 3599999999 9999999999999999999999999976
Q ss_pred hHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
... .++||+|+.+.- ......+++.+.++|+|||+++++...
T Consensus 124 ~~~-------~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 124 ISL-------PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CCC-------SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cCc-------CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 521 378999998641 244677889999999999999987654
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.24 E-value=8.5e-12 Score=111.17 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=83.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHh---CCCCc-------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERA---GVSHK------- 187 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~---gl~~~------- 187 (294)
++.+|||+|||+ |..++.++..+ .++.+|+++|+|+++++.|++++... ++.++
T Consensus 51 ~~~~vLD~gcGs---------------G~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 51 GPVTLWDPCCGS---------------GYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp SCEEEEETTCTT---------------SHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred CCCeEEECCCCC---------------CHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 346999999999 99999999873 12579999999999999999998876 55433
Q ss_pred ------------------EE-------------EEEcchhhhHHHHhhcCCCCceeEEEEcCCc------------cchH
Q 022597 188 ------------------VK-------------IKHGLAADSLKALILNGEASSYDFAFVDAEK------------RMYQ 224 (294)
Q Consensus 188 ------------------v~-------------~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~------------~~~~ 224 (294)
++ +.++|..+..+..... ...+||+|+.+++. ..+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCCCeeccccccccccccHHH
Confidence 67 9999987643210000 03589999997541 3356
Q ss_pred HHHHHHHhcccCCeEEEEe
Q 022597 225 EYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 225 ~~~~~~~~lLkpgG~ivid 243 (294)
.+++.+.+.|+|||++++.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 8999999999999999984
No 162
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.24 E-value=2.3e-11 Score=114.37 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=86.3
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
....++++|||||||+ |..++.+++. + ..+|+++|+++ +++.|+++++.+|+.++++++.+|
T Consensus 60 ~~~~~~~~VLDiGcGt---------------G~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d 121 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGT---------------GILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGK 121 (340)
T ss_dssp GGGTTTCEEEEETCTT---------------SHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESC
T ss_pred hhhcCCCEEEEeeccC---------------cHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEee
Confidence 3445678999999999 9999998886 2 46999999997 999999999999998899999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcC---C---ccchHHHHHHHHhcccCCeEEEEe
Q 022597 195 AADSLKALILNGEASSYDFAFVDA---E---KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~---~---~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+.+.. + +.++||+|+.+. . ......+++.+.++|+|||.++.+
T Consensus 122 ~~~~~--~----~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 122 IEEVH--L----PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp TTTSC--C----SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHhc--C----CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 97641 1 147899999765 1 234677888889999999999843
No 163
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.23 E-value=5.3e-11 Score=102.95 Aligned_cols=102 Identities=12% Similarity=0.138 Sum_probs=83.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++... .+++++|+++++++.|+++++..+ .+++++.+|+.+.
T Consensus 38 ~~~~vLDlG~G~---------------G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 38 KRGKVLDLACGV---------------GGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKL 97 (227)
T ss_dssp SCCEEEEETCTT---------------SHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSC
T ss_pred CCCeEEEEeccC---------------CHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcC
Confidence 356999999999 99998888864 399999999999999999998877 5799999998763
Q ss_pred HHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 199 LKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
. + ..++||+|+.... ..+...+++.+.+.|+|||.+++....
T Consensus 98 ~--~----~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 98 S--F----EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp C--S----CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C--C----CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 1 1 1468999998654 234678899999999999999886543
No 164
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.23 E-value=4.2e-11 Score=112.45 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=86.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..++. +. + +.+|+++|+|+++++.|+++++.+|+.++++++++|+.+
T Consensus 194 ~~~~~VLDlg~G~---------------G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~ 254 (336)
T 2yx1_A 194 SLNDVVVDMFAGV---------------GPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVRE 254 (336)
T ss_dssp CTTCEEEETTCTT---------------SHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CCCCEEEEccCcc---------------CHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHH
Confidence 4778999999999 999988 66 2 689999999999999999999999998789999999987
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+ ++||+|++|++. ...++++.+.++|+|||++++....
T Consensus 255 ~~---------~~fD~Vi~dpP~-~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 255 VD---------VKGNRVIMNLPK-FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp CC---------CCEEEEEECCTT-TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred hc---------CCCcEEEECCcH-hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 63 689999999753 2347888999999999999987663
No 165
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.23 E-value=1.2e-10 Score=108.49 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=91.8
Q ss_pred hC-CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 118 LG-AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 118 ~~-~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
.+ +.+|||||||+ |..+..+++..| +.+++++|+ +++++.|+++++..++.++++++.+|..
T Consensus 177 ~~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 239 (352)
T 3mcz_A 177 FARARTVIDLAGGH---------------GTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLL 239 (352)
T ss_dssp GTTCCEEEEETCTT---------------CHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTT
T ss_pred cCCCCEEEEeCCCc---------------CHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcc
Confidence 44 78999999999 999999999887 689999999 8899999999999999889999999987
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
+..... .++||+|++... .+....+++.+.+.|+|||.+++.+..++.
T Consensus 240 ~~~~~~-----~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 240 DARNFE-----GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp CGGGGT-----TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred cCcccC-----CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 642111 467999987532 334578999999999999999987766544
No 166
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.23 E-value=3.9e-11 Score=112.15 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=86.8
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
.....++++|||||||+ |..++.+++. + ..+|+++|++ ++++.|+++++.+|+.++++++.+
T Consensus 33 ~~~~~~~~~VLDiGcGt---------------G~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~ 94 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGT---------------GILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRG 94 (328)
T ss_dssp HHHHHTTCEEEEETCTT---------------SHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEES
T ss_pred hHhhcCCCEEEEecCcc---------------HHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEEC
Confidence 34456778999999999 9999988875 2 4699999999 599999999999999999999999
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEe
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
|+.+.. + +.++||+|+.+.. ......++..+.++|+|||.++.+
T Consensus 95 d~~~~~--~----~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 95 KLEDVH--L----PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CTTTSC--C----SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred chhhcc--C----CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 997641 1 1378999998732 344678888889999999999854
No 167
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.23 E-value=9.5e-11 Score=113.99 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH-----
Q 022597 105 PDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY----- 179 (294)
Q Consensus 105 ~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~----- 179 (294)
+....-+...+.+.++.+|||||||+ |..++.++...+ ..+++|||+++++++.|+++.
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGt---------------G~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frk 222 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGV---------------GQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRK 222 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTT---------------SHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCC---------------CHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 33333333444566778999999999 999999998764 447999999999999998865
Q ss_pred --HHhCCC-CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 180 --ERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 180 --~~~gl~-~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
+..|+. .++++++||+.+...... .+.||+||++.. ..+....+..+.+.|||||.||+.+.+-.
T Consensus 223 r~~~~Gl~~~rVefi~GD~~~lp~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 223 WMKWYGKKHAEYTLERGDFLSEEWRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHTBCCCEEEEEECCTTSHHHHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred HHHHhCCCCCCeEEEECcccCCccccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 345763 689999999987532110 147999998754 44566777888899999999999766543
No 168
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=3.5e-11 Score=113.32 Aligned_cols=103 Identities=13% Similarity=0.150 Sum_probs=85.6
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++|||||||+ |..++.+++. ...+|+++|+++ +++.|+++++.+|+.++++++.+|+
T Consensus 47 ~~~~~~~VLDiGcGt---------------G~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~ 108 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGS---------------GILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKV 108 (348)
T ss_dssp GGTTTCEEEEETCTT---------------SHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCT
T ss_pred ccCCcCEEEEcCCCc---------------cHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcch
Confidence 445778999999999 9999988875 246999999996 8899999999999988999999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+.. + .++||+|+.... .+.+.+.+..+.++|+|||.+++.
T Consensus 109 ~~~~--~-----~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 109 EEVS--L-----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTCC--C-----SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhCC--C-----CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7641 1 368999998743 345677888889999999999854
No 169
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.22 E-value=2.8e-10 Score=100.16 Aligned_cols=158 Identities=9% Similarity=0.017 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhh-hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC
Q 022597 105 PDQAQLLAMLVQI-LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 183 (294)
Q Consensus 105 ~~~~~lL~~l~~~-~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g 183 (294)
|..-.+....... .++.+|||+|||+ |..++.++...| +.+++++|+|+++++.+++++..+|
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~---------------GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g 97 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGF---------------NPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLK 97 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTT---------------HHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSC
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCC---------------CHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 4444444443333 3467999999999 988888887665 6699999999999999999999999
Q ss_pred CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCCCcccCcc--cCC
Q 022597 184 VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQM--VND 258 (294)
Q Consensus 184 l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~--~~~ 258 (294)
..+++++ .|..+..+ .++||+|+.--- -++.+..+..+.+.|+|||++|--.+ ..+.++. ...
T Consensus 98 ~~~~v~~--~d~~~~~~-------~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfpt---ksl~Gr~~gm~~ 165 (200)
T 3fzg_A 98 TTIKYRF--LNKESDVY-------KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPI---KSLSGKEKGMEE 165 (200)
T ss_dssp CSSEEEE--ECCHHHHT-------TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEEC---CCCC--CTTCCC
T ss_pred CCccEEE--ecccccCC-------CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeCh---HHhcCCCcchhh
Confidence 9877777 55543321 688999986432 12222334478899999999997764 2222221 111
Q ss_pred cchHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 259 AKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 259 ~~~~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
.. -+.|.+.+ ..+...+--.-+|+-+....+|
T Consensus 166 ~Y---~~~~~~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 166 NY---QLWFESFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp CH---HHHHHHHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred hH---HHHHHHhc-cCcceeeeeeeeCceEEEEEec
Confidence 11 23444445 4444555566777777666553
No 170
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.21 E-value=5.8e-11 Score=106.82 Aligned_cols=105 Identities=11% Similarity=0.063 Sum_probs=86.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++.. + ..+++++|+++++++.|++++...++..+++++.+|+.+
T Consensus 63 ~~~~~vLDiGcG~---------------G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 125 (298)
T 1ri5_A 63 KRGDSVLDLGCGK---------------GGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG 125 (298)
T ss_dssp CTTCEEEEETCTT---------------TTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT
T ss_pred CCCCeEEEECCCC---------------CHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc
Confidence 4567999999999 9888887775 2 469999999999999999999998887889999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEEEec
Q 022597 198 SLKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
... ...++||+|+.... ..+...+++.+.++|+|||.+++..
T Consensus 126 ~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 126 RHM-----DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCC-----CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccc-----CCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 410 01578999998643 3456789999999999999999864
No 171
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=6.4e-11 Score=101.26 Aligned_cols=109 Identities=16% Similarity=0.107 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC
Q 022597 107 QAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH 186 (294)
Q Consensus 107 ~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~ 186 (294)
...++..+.... +.+|||+|||+ |..+..++.. +.+++++|+++++++.|+++. .
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~ 84 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGT---------------GRWTGHLASL---GHQIEGLEPATRLVELARQTH------P 84 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTT---------------CHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------T
T ss_pred HHHHHHHHhccC-CCeEEEecCCC---------------CHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------C
Confidence 344455555433 67999999999 9999998886 569999999999999998872 3
Q ss_pred cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 187 KVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 187 ~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
+++++.+|+.+.. + ..++||+|+.... ..+...+++.+.+.|+|||.+++....
T Consensus 85 ~~~~~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 85 SVTFHHGTITDLS--D----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp TSEEECCCGGGGG--G----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCeEEeCcccccc--c----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 6899999997642 1 1579999998542 347789999999999999999987643
No 172
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.21 E-value=4.5e-11 Score=105.63 Aligned_cols=100 Identities=23% Similarity=0.227 Sum_probs=82.0
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++.. +.+|+++|+++++++.|++++ .+...+++++.+|+.+
T Consensus 38 ~~~~~vLDiG~G~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGT---------------GRIALPLIAR---GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARA 97 (263)
T ss_dssp SSCCEEEEETCTT---------------STTHHHHHTT---TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTS
T ss_pred CCCCEEEEeCCcC---------------CHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEccccc
Confidence 4567999999999 9999988875 579999999999999999988 3344579999999865
Q ss_pred hHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.. + ..++||+|+.... ..+...+++.+.+.|+|||.+++.
T Consensus 98 ~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP--L----PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC--S----CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CC--C----CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 31 1 2478999998654 235688999999999999999986
No 173
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=1.5e-10 Score=110.15 Aligned_cols=117 Identities=22% Similarity=0.245 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.+..+..|..++ ..++.+|||+|||+ |..++.++...+ .++|+++|+|+++++.|+++++.
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGs---------------G~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~ 263 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGS---------------GTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALA 263 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTT---------------CHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcC---------------cHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHH
Confidence 46777777777777 67788999999999 999999888643 46899999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----------cchHHHHHHHHhcccCCeEEEE
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----------RMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----------~~~~~~~~~~~~lLkpgG~ivi 242 (294)
+|+.+++++.++|+.+... ..++||+|+.|++- ..|.++++.+.+.| +|+.+++
T Consensus 264 ~gl~~~i~~~~~D~~~~~~------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 264 AGVLDKIKFIQGDATQLSQ------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp TTCGGGCEEEECCGGGGGG------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred cCCCCceEEEECChhhCCc------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 9998899999999987532 14789999998761 12678888888888 4444443
No 174
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.21 E-value=2.7e-10 Score=97.77 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHHh---hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQ---ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~---~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
....+.....+...+. ..++.+|||+|||+ |..+..++... ..+|+++|+++++++.|++
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~---------------G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~ 90 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGT---------------GVLSYGALLLG--AKEVICVEVDKEAVDVLIE 90 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTT---------------CHHHHHHHHTT--CSEEEEEESCHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCC---------------CHHHHHHHHcC--CCEEEEEECCHHHHHHHHH
Confidence 4456666666655554 33567999999999 99999988752 3589999999999999999
Q ss_pred HHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEe
Q 022597 178 YYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 178 ~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+++..|+ +++++++|+.+. .++||+|++|++ ......+++.+.+.+ ||++++.
T Consensus 91 ~~~~~~~--~~~~~~~d~~~~---------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 91 NLGEFKG--KFKVFIGDVSEF---------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp HTGGGTT--SEEEEESCGGGC---------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred HHHHcCC--CEEEEECchHHc---------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 9998887 699999999764 358999999976 233567888888887 6665544
No 175
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.21 E-value=2.7e-11 Score=106.78 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=80.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..++.. +.+|+++|+++++++.|+++ ++++.+|+.+
T Consensus 40 ~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~ 92 (240)
T 3dli_A 40 KGCRRVLDIGCGR---------------GEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIE 92 (240)
T ss_dssp TTCSCEEEETCTT---------------THHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHH
T ss_pred cCCCeEEEEeCCC---------------CHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHH
Confidence 4567999999999 9999988886 46899999999999988765 7888999877
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+..+ ..++||+|+.... .+.+..+++.+.+.|+|||.+++....
T Consensus 93 ~~~~~----~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 93 YLKSL----PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHTS----CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred Hhhhc----CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 65433 2579999997533 346789999999999999999997653
No 176
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.20 E-value=2.9e-11 Score=110.24 Aligned_cols=102 Identities=10% Similarity=0.140 Sum_probs=84.2
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC--CcEEEEEcchhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS--HKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~--~~v~~~~gda~~ 197 (294)
+.+|||||||+ |..+..++.. +.+|+++|+++++++.|++++...++. .+++++.+|+.+
T Consensus 83 ~~~vLDlGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 83 SGPVLELAAGM---------------GRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp CSCEEEETCTT---------------TTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred CCcEEEEeccC---------------CHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 44999999999 9999998875 578999999999999999999887643 679999999976
Q ss_pred hHHHHhhcCCCCceeEEEEcC------CccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDA------EKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~------~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
... .++||+|++.. +......+++.+.+.|+|||.+++....
T Consensus 145 ~~~-------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 145 FAL-------DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp CCC-------SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCc-------CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 421 57899988641 2335688999999999999999997653
No 177
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.20 E-value=2.8e-11 Score=107.18 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=81.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ .+|+++|+++++++.|++++. ..+++++.+|+.+.
T Consensus 44 ~~~~vLD~GcG~---------------G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~ 102 (253)
T 3g5l_A 44 NQKTVLDLGCGF---------------GWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI 102 (253)
T ss_dssp TTCEEEEETCTT---------------CHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC
T ss_pred CCCEEEEECCCC---------------CHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC
Confidence 567999999999 999999988632 399999999999999998765 45799999998753
Q ss_pred HHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
. ...++||+|+.... ..+...+++.+.+.|+|||.+++.
T Consensus 103 ~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 103 A------IEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C------CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred C------CCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 1 12579999998653 346789999999999999999996
No 178
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.20 E-value=6.1e-11 Score=103.62 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=80.0
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
+.+|||+|||+ |..+..++.. .+++++|+++++++.|++++...+ .+++++.+|+.+..
T Consensus 34 ~~~vLdiG~G~---------------G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 34 GKRIADIGCGT---------------GTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE 92 (243)
T ss_dssp TCEEEEESCTT---------------CHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC
T ss_pred CCeEEEecCCC---------------CHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC
Confidence 46999999999 9988887764 699999999999999999998876 46899999987641
Q ss_pred HHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEEEe
Q 022597 200 KALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
. .++||+|++..+ ......+++.+.++|+|||.++++
T Consensus 93 --~-----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 93 --L-----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp --C-----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --C-----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 378999998641 245678899999999999999984
No 179
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.20 E-value=4.7e-11 Score=114.62 Aligned_cols=105 Identities=18% Similarity=0.227 Sum_probs=86.1
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++|||||||| |..++..+++- ..+|++||.++ +++.|+++++.+|+.++|+++++++
T Consensus 80 ~~~~~k~VLDvG~Gt---------------GiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~ 141 (376)
T 4hc4_A 80 AALRGKTVLDVGAGT---------------GILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPV 141 (376)
T ss_dssp HHHTTCEEEEETCTT---------------SHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCT
T ss_pred HhcCCCEEEEeCCCc---------------cHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeee
Confidence 345778999999999 99998887753 36899999996 8899999999999999999999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcC------CccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDA------EKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~------~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.- + .+++|+|+... .......++....++|+|||.++-+..
T Consensus 142 ~~~~--l-----pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 142 ETVE--L-----PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp TTCC--C-----SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred eeec--C-----CccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 7751 1 57899998632 134567788888899999999986654
No 180
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.20 E-value=1.6e-10 Score=109.22 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=90.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+..+|||||||+ |..+..+++..| +.+++++|+ +++++.|++++...|+.++++++.+|..+
T Consensus 201 ~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~ 263 (369)
T 3gwz_A 201 SGAATAVDIGGGR---------------GSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE 263 (369)
T ss_dssp TTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT
T ss_pred ccCcEEEEeCCCc---------------cHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC
Confidence 4567999999999 999999999876 789999999 99999999999999999999999999873
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
.. ..+||+|++..- ......+++.+.+.|+|||.+++.+..++.
T Consensus 264 ~~--------p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 264 TI--------PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp CC--------CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred CC--------CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 21 237999987532 333457999999999999999998776544
No 181
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.19 E-value=4.3e-11 Score=103.44 Aligned_cols=110 Identities=19% Similarity=0.142 Sum_probs=85.0
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
..++..+. ..++.+|||+|||+ |..+..++.. +.+++++|+++++++.|++++. .+
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~ 90 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGT---------------GNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KE 90 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTT---------------SHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TT
T ss_pred HHHHHHhh-ccCCCeEEEeCCCC---------------CHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----Cc
Confidence 34444443 34677999999999 9999998885 5799999999999999998765 46
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc---cch--HHHHHHHHhcccCCeEEEEecccCC
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAEK---RMY--QEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~---~~~--~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
++++.+|+.+.. . .++||+|+....- .+. ..+++.+.+.|+|||.+++.+..+.
T Consensus 91 ~~~~~~d~~~~~------~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 91 FSITEGDFLSFE------V-PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp CCEESCCSSSCC------C-CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred eEEEeCChhhcC------C-CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 899999987641 1 2789999987542 222 3489999999999999999875443
No 182
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.19 E-value=9.1e-11 Score=108.80 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=89.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
+..+|||||||+ |..+..++...| +.+++++|+ +++++.|+++++..++.+++++..+|..+.
T Consensus 169 ~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 231 (332)
T 3i53_A 169 ALGHVVDVGGGS---------------GGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP 231 (332)
T ss_dssp GGSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCEEEEeCCCh---------------hHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC
Confidence 357999999999 999999999886 779999999 999999999999999989999999998642
Q ss_pred HHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCCc
Q 022597 199 LKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHGK 250 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~ 250 (294)
. ..+||+|++..- .+....+++.+.+.|+|||.+++.+..++..
T Consensus 232 ~--------p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 232 L--------PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp C--------CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC--
T ss_pred C--------CCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC
Confidence 1 238999987432 3346789999999999999999987765543
No 183
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.19 E-value=3.5e-11 Score=104.24 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=84.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC----CcEEEEEcc
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS----HKVKIKHGL 194 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~----~~v~~~~gd 194 (294)
++.+|||+|||+ |..+..++.. +.+|+++|+++.+++.|+++++..++. .++++..+|
T Consensus 30 ~~~~vLdiG~G~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d 91 (235)
T 3sm3_A 30 EDDEILDIGCGS---------------GKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVEN 91 (235)
T ss_dssp TTCEEEEETCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECC
T ss_pred CCCeEEEECCCC---------------CHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEec
Confidence 567999999999 9999999886 579999999999999999999887773 468999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+.. ...++||+|++... ......+++.+.+.|+|||.+++.+.
T Consensus 92 ~~~~~------~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 92 ASSLS------FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TTSCC------SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccC------CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 87531 12578999998643 22344899999999999999998754
No 184
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.19 E-value=3.6e-11 Score=106.25 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=81.8
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++...+ +++++++|+++++++.++++ ..+++++.+|+.+.
T Consensus 33 ~~~~vLdiG~G~---------------G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 33 RVLNGYDLGCGP---------------GNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATW 90 (259)
T ss_dssp CCSSEEEETCTT---------------THHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTC
T ss_pred CCCEEEEecCcC---------------CHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhc
Confidence 456999999999 999999999875 67999999999999999887 24689999998764
Q ss_pred HHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEec
Q 022597 199 LKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. ..++||+|+.... ..+...+++.+.+.|+|||.+++..
T Consensus 91 ~-------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 91 K-------PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp C-------CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred C-------ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 1578999998754 3457889999999999999999864
No 185
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.18 E-value=7.4e-11 Score=101.61 Aligned_cols=97 Identities=14% Similarity=0.208 Sum_probs=80.0
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.++.+|||+|||+ |..+..++.. +.+++++|+++++++.|++++ ++++..+|+.
T Consensus 41 ~~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~ 95 (211)
T 3e23_A 41 LPAGAKILELGCGA---------------GYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFH 95 (211)
T ss_dssp SCTTCEEEESSCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGG
T ss_pred cCCCCcEEEECCCC---------------CHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeec
Confidence 34567999999999 9999998875 579999999999999999887 3667788886
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.. ..++||+|+.... ......+++.+.+.|+|||.+++...
T Consensus 96 ~~~-------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 96 QLD-------AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp GCC-------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC-------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 542 1689999998653 23667899999999999999999744
No 186
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.18 E-value=6.4e-11 Score=112.53 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=84.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++|||+| |+ |..++.++...+ .++|+++|+++++++.|+++++++|+. +++++.+|+.+.
T Consensus 172 ~~~~VLDlG-G~---------------G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~ 233 (373)
T 2qm3_A 172 ENKDIFVLG-DD---------------DLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKP 233 (373)
T ss_dssp TTCEEEEES-CT---------------TCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSC
T ss_pred CCCEEEEEC-CC---------------CHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhh
Confidence 568999999 99 999999988643 579999999999999999999999987 799999999773
Q ss_pred HHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccCCe-EEEEe
Q 022597 199 LKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGG-IIVID 243 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkpgG-~ivid 243 (294)
++.. ..++||+|++|++. .....+++.+.+.|+||| ++++.
T Consensus 234 l~~~----~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 234 LPDY----ALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCTT----TSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred chhh----ccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 3210 03589999999752 235788899999999999 43444
No 187
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.18 E-value=7.1e-11 Score=105.26 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=79.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++.. +.+|+++|+++++++.|++++. +++++.+|+.+.
T Consensus 50 ~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~ 105 (263)
T 3pfg_A 50 KAASLLDVACGT---------------GMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDF 105 (263)
T ss_dssp TCCEEEEETCTT---------------SHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTC
T ss_pred CCCcEEEeCCcC---------------CHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHC
Confidence 447999999999 9999888775 4689999999999999998753 689999998764
Q ss_pred HHHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.. .++||+|++... ......+++.+.+.|+|||.++++..
T Consensus 106 ~~-------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 106 SL-------GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp CC-------SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred Cc-------cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 21 478999998752 13566889999999999999999754
No 188
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.17 E-value=1.3e-10 Score=99.88 Aligned_cols=108 Identities=17% Similarity=0.187 Sum_probs=83.3
Q ss_pred HHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEE
Q 022597 111 LAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI 190 (294)
Q Consensus 111 L~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~ 190 (294)
+.......++.+|||+|||+ |..+..++.. +.+++++|+++++++.|+++ .++++
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~ 98 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGE---------------GWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEV 98 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTT---------------CHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCE
T ss_pred HHHHhhcCCCCEEEEeCCCC---------------CHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------ccccc
Confidence 33334455678999999999 9999888876 57999999999999999876 35778
Q ss_pred EEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 191 KHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 191 ~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..++..+..... ....++||+|+.... ..+...+++.+.+.|+|||.+++...
T Consensus 99 ~~~~~~~~~~~~--~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 99 HLASYAQLAEAK--VPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EECCHHHHHTTC--SCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred chhhHHhhcccc--cccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 888886642111 112456999987643 55678999999999999999999765
No 189
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.17 E-value=1.3e-10 Score=108.93 Aligned_cols=104 Identities=19% Similarity=0.196 Sum_probs=87.5
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||||||+ |..+..++...+ +.+++++|+ +++++.|+++++..|+.++++++.+|..
T Consensus 180 ~~~~~~vlDvG~G~---------------G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 242 (374)
T 1qzz_A 180 WSAVRHVLDVGGGN---------------GGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFF 242 (374)
T ss_dssp CTTCCEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCEEEEECCCc---------------CHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 34678999999999 999999999886 789999999 9999999999999999889999999987
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+ ...||+|++... ......+++.+.+.|+|||.+++.+.
T Consensus 243 ~~~--------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 243 KPL--------PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SCC--------SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcC--------CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 522 235999987543 22345899999999999998887665
No 190
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.16 E-value=2.3e-10 Score=108.58 Aligned_cols=125 Identities=18% Similarity=0.084 Sum_probs=90.9
Q ss_pred CCCCCCHHHHH-HHHHHHhhh--CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHH
Q 022597 99 SQMQVSPDQAQ-LLAMLVQIL--GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVA 175 (294)
Q Consensus 99 ~~~~v~~~~~~-lL~~l~~~~--~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A 175 (294)
+..++.+.+.+ +...+.... .+.+|||+|||+ |..++.++.. ..+|+++|.++++++.|
T Consensus 190 ~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~---------------G~~~l~la~~---~~~V~gvd~~~~ai~~a 251 (369)
T 3bt7_A 190 SFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGN---------------GNFSLALARN---FDRVLATEIAKPSVAAA 251 (369)
T ss_dssp SCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTT---------------SHHHHHHGGG---SSEEEEECCCHHHHHHH
T ss_pred CeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCC---------------CHHHHHHHhc---CCEEEEEECCHHHHHHH
Confidence 44566666544 444444433 247899999999 9999988874 46999999999999999
Q ss_pred HHHHHHhCCCCcEEEEEcchhhhHHHHhhcCC----------CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 176 KKYYERAGVSHKVKIKHGLAADSLKALILNGE----------ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 176 ~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~----------~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++++.+|+. +++++.+|+.+.++.+...+. ..+||+|++|++.... .+.+.+.|+++|.+++-..
T Consensus 252 ~~n~~~ng~~-~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 252 QYNIAANHID-NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHHHTTCC-SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHHHHHHTTSSEEEEEES
T ss_pred HHHHHHcCCC-ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHHHHHHhCCCEEEEEEC
Confidence 9999999985 799999999988766532110 0379999999875432 2334555667887776544
No 191
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=8.4e-11 Score=106.02 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=82.9
Q ss_pred HHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 113 MLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 113 ~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
..+...++.+|||||||+ |..+..++. ++++|+++|+++++++.|++++ .++++..
T Consensus 51 ~~l~~~~~~~vLDiGcG~---------------G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~ 106 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGT---------------GQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY------PHLHFDV 106 (279)
T ss_dssp HHHCCCTTCEEEEETCTT---------------SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC------TTSCEEE
T ss_pred HHhCCCCCCEEEEecCCC---------------CHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC------CCCEEEE
Confidence 334455678999999999 999999988 3689999999999999998765 3688999
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+|+.+.. . .++||+|+.... ..+...+++.+.+.|+|||.+++...
T Consensus 107 ~d~~~~~--~-----~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 107 ADARNFR--V-----DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp CCTTTCC--C-----SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CChhhCC--c-----CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 9987631 1 478999998654 24678899999999999999998644
No 192
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.15 E-value=1.9e-10 Score=107.48 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=88.4
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||||||+ |..+..++...+ +.+++++|+ +++++.|+++++..|+.++++++.+|.
T Consensus 180 ~~~~~~~vLDvG~G~---------------G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~ 242 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGK---------------GGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDF 242 (360)
T ss_dssp CCTTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCccCcEEEEeCCcC---------------cHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCC
Confidence 345667999999999 999999999876 689999999 999999999999999988999999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+.+ ...||+|++... ......+++.+.+.|+|||.+++.+..
T Consensus 243 ~~~~--------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 243 FEPL--------PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp TSCC--------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCC--------CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 7532 245999987543 223468999999999999998887665
No 193
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.15 E-value=4.9e-11 Score=108.40 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=75.2
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
..+|||||||+ |..+..++.. +.+|+++|+|+++++.|++ ..+++++++++.+..
T Consensus 40 ~~~vLDvGcGt---------------G~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 40 RGDALDCGCGS---------------GQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp SSEEEEESCTT---------------TTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCC
T ss_pred CCCEEEEcCCC---------------CHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhc
Confidence 35899999999 9999988875 4799999999999887653 247999999987641
Q ss_pred HHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEec
Q 022597 200 KALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.++++||+|++... .-+...+++.+.+.|||||++++-.
T Consensus 95 ------~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 95 ------LPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp ------CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 12689999987532 3346789999999999999998643
No 194
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.15 E-value=3.1e-11 Score=107.18 Aligned_cols=102 Identities=12% Similarity=0.046 Sum_probs=80.4
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCC-hHHHHHH---HHHHHHhCCCCcEEEEEcc
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERD-ARSLEVA---KKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~-~~~~~~A---~~~~~~~gl~~~v~~~~gd 194 (294)
++.+|||||||+ |..+..+++..+ +.+|+|+|++ +.+++.| +++.++.|+. +++++.+|
T Consensus 24 ~~~~vLDiGCG~---------------G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d 86 (225)
T 3p2e_A 24 FDRVHIDLGTGD---------------GRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAA 86 (225)
T ss_dssp CSEEEEEETCTT---------------SHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCB
T ss_pred CCCEEEEEeccC---------------cHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcC
Confidence 566999999999 999999987654 7899999999 5555555 8888888876 59999999
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCcc--------chHHHHHHHHhcccCCeEEEE
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKR--------MYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~--------~~~~~~~~~~~lLkpgG~ivi 242 (294)
+.+..... .+.+|.+++..+.. .+.++++.+.++|||||.+++
T Consensus 87 ~~~l~~~~-----~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 87 AESLPFEL-----KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TTBCCGGG-----TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred HHHhhhhc-----cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 97752211 36788888765421 246789999999999999998
No 195
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.15 E-value=7.3e-11 Score=103.11 Aligned_cols=107 Identities=15% Similarity=0.194 Sum_probs=83.9
Q ss_pred HHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEE
Q 022597 111 LAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI 190 (294)
Q Consensus 111 L~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~ 190 (294)
+..++...++.+|||+|||+ |..+..++.. + ..+++++|+++++++.|+++... .++++
T Consensus 35 l~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~ 93 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGF---------------GWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITY 93 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTT---------------CHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEE
T ss_pred HHHhccccCCCEEEEEcCcC---------------CHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceE
Confidence 44444445677999999999 9999988876 2 23999999999999999887643 36999
Q ss_pred EEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEec
Q 022597 191 KHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 191 ~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.+|+.+.. + ..++||+|+.... ..+...+++.+.+.|+|||.+++..
T Consensus 94 ~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 94 ERADLDKLH--L----PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EECCGGGCC--C----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChhhcc--C----CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 999987642 1 2578999998643 2456889999999999999999864
No 196
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.15 E-value=3.4e-10 Score=110.02 Aligned_cols=116 Identities=15% Similarity=0.164 Sum_probs=91.7
Q ss_pred CCCCCCHHHHHHH-HHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 99 SQMQVSPDQAQLL-AMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 99 ~~~~v~~~~~~lL-~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
+..+..+.+.+.| ..+....++.+|||+|||+ |..++.++.. +.+|+++|+++++++.|++
T Consensus 269 ~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~---------------G~~sl~la~~---~~~V~gvD~s~~ai~~A~~ 330 (425)
T 2jjq_A 269 SFFQTNSYQAVNLVRKVSELVEGEKILDMYSGV---------------GTFGIYLAKR---GFNVKGFDSNEFAIEMARR 330 (425)
T ss_dssp SCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTT---------------THHHHHHHHT---TCEEEEEESCHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhhccCCCCEEEEeeccc---------------hHHHHHHHHc---CCEEEEEECCHHHHHHHHH
Confidence 4556677665544 4444455678999999999 9999999875 4699999999999999999
Q ss_pred HHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchH-HHHHHHHhcccCCeEEEEe
Q 022597 178 YYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQ-EYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 178 ~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~-~~~~~~~~lLkpgG~ivid 243 (294)
+++.+|+. ++++.+|+.+.+ ..+||+|++|++...+. .+++.+. .|+|||++++.
T Consensus 331 n~~~ngl~--v~~~~~d~~~~~--------~~~fD~Vv~dPPr~g~~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 331 NVEINNVD--AEFEVASDREVS--------VKGFDTVIVDPPRAGLHPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp HHHHHTCC--EEEEECCTTTCC--------CTTCSEEEECCCTTCSCHHHHHHHH-HHCCSEEEEEE
T ss_pred HHHHcCCc--EEEEECChHHcC--------ccCCCEEEEcCCccchHHHHHHHHH-hcCCCcEEEEE
Confidence 99999986 999999998753 23799999998854443 4565554 58999999875
No 197
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.14 E-value=7.6e-11 Score=103.84 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=83.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..++... ..+|+++|+++++++.|+++++.. .+++++.+|+.+
T Consensus 92 ~~~~~vLDiG~G~---------------G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~ 151 (254)
T 1xtp_A 92 HGTSRALDCGAGI---------------GRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMET 151 (254)
T ss_dssp CCCSEEEEETCTT---------------THHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGG
T ss_pred cCCCEEEEECCCc---------------CHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHH
Confidence 3567999999999 99999988875 468999999999999999987653 579999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.. + ..++||+|+.... ..+...+++.+.+.|+|||.+++.+.
T Consensus 152 ~~--~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 152 AT--L----PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CC--C----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC--C----CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 31 1 2478999997643 24467899999999999999998764
No 198
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.14 E-value=2.5e-10 Score=104.26 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=77.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeC-ChHHHHHHHHHH-----HHhCCC----Cc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACER-DARSLEVAKKYY-----ERAGVS----HK 187 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~-~~~~~~~A~~~~-----~~~gl~----~~ 187 (294)
.++++|||+|||+ |..++.++.. + .++|+++|+ ++++++.|++++ +..|+. ++
T Consensus 78 ~~~~~vLDlG~G~---------------G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~ 140 (281)
T 3bzb_A 78 IAGKTVCELGAGA---------------GLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRAS 140 (281)
T ss_dssp TTTCEEEETTCTT---------------SHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CC
T ss_pred cCCCeEEEecccc---------------cHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCC
Confidence 4667999999999 9999988874 2 359999999 899999999999 666665 57
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEE-cCC--ccchHHHHHHHHhccc---C--CeEEEE
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFV-DAE--KRMYQEYFELLLQLIR---V--GGIIVI 242 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfi-D~~--~~~~~~~~~~~~~lLk---p--gG~ivi 242 (294)
+++...+..+....+...-..++||+|+. |.. ......+++.+.++|+ | ||.+++
T Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 141 PKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp CEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred eEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 88886554332222210001478999986 543 4568899999999999 9 997665
No 199
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.13 E-value=1.1e-10 Score=109.61 Aligned_cols=100 Identities=18% Similarity=0.227 Sum_probs=83.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+.+|||+|||+ |..+..++...+ ..+|+++|+++.+++.|+++++..++. ++++.+|..+
T Consensus 195 ~~~~~VLDlGcG~---------------G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~ 256 (343)
T 2pjd_A 195 HTKGKVLDVGCGA---------------GVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFS 256 (343)
T ss_dssp TCCSBCCBTTCTT---------------SHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTT
T ss_pred CCCCeEEEecCcc---------------CHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccc
Confidence 3466999999999 999999999865 579999999999999999999998875 5678888865
Q ss_pred hHHHHhhcCCCCceeEEEEcCCc--------cchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEK--------RMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~--------~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.. .++||+|+.+..- .....+++.+.+.|+|||.+++-
T Consensus 257 ~~--------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 257 EV--------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp TC--------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cc--------cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 31 4789999997642 23578899999999999999874
No 200
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.13 E-value=4.5e-10 Score=93.32 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=80.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||+|||+ |..+..++... .+++++|+++++++.++++ ..++++..+|
T Consensus 14 ~~~~~~~vLDiG~G~---------------G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d- 68 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGN---------------GFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP- 68 (170)
T ss_dssp HSSCCEEEEEETCTT---------------CTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-
T ss_pred CcCCCCeEEEECCCC---------------CHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-
Confidence 445667999999999 99999988864 4999999999999999887 3479999888
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
... ..++||+|+.... ..+...+++.+.+.|+|||.+++.+....
T Consensus 69 ~~~--------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 69 KEI--------PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp GGS--------CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCC--------CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 211 2578999997643 34678999999999999999999876433
No 201
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.13 E-value=2.8e-10 Score=103.65 Aligned_cols=109 Identities=14% Similarity=0.217 Sum_probs=76.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC---CCcEE--EEEeCChHHHHHHHHHHHHh-CCCCcEEE--
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP---ESGCL--VACERDARSLEVAKKYYERA-GVSHKVKI-- 190 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~---~~~~v--~~id~~~~~~~~A~~~~~~~-gl~~~v~~-- 190 (294)
++.+|||||||+ |..+..++..+. ++.++ +++|+|+++++.|++.++.. ++. ++++
T Consensus 52 ~~~~VLDiG~Gt---------------G~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~ 115 (292)
T 2aot_A 52 SEIKILSIGGGA---------------GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAW 115 (292)
T ss_dssp SEEEEEEETCTT---------------SHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEE
T ss_pred CCCeEEEEcCCC---------------CHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEE
Confidence 345999999999 987765443321 25644 99999999999999998764 443 4544
Q ss_pred EEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEe
Q 022597 191 KHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 191 ~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
..+++.+....+......++||+|++... ..+....++.+.++|||||.+++-
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 116 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp ECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred EecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 45565543322110012578999987643 456788999999999999999985
No 202
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.12 E-value=1.6e-10 Score=107.02 Aligned_cols=103 Identities=18% Similarity=0.137 Sum_probs=87.9
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
.+|||+|||+ |..+..++...| +.+++++|+ +++++.|+++++..|+.++++++.+|..+.
T Consensus 169 ~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 229 (334)
T 2ip2_A 169 RSFVDVGGGS---------------GELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE-- 229 (334)
T ss_dssp CEEEEETCTT---------------CHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC--
T ss_pred CEEEEeCCCc---------------hHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC--
Confidence 7999999999 999999999886 679999999 999999999999888888999999998752
Q ss_pred HHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 201 ALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
+ .++||+|++... ......+++.+.+.|+|||.+++.+..++
T Consensus 230 -~-----~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 230 -V-----PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp -C-----CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -C-----CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 1 367999997543 23345899999999999999998877554
No 203
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.12 E-value=4.4e-10 Score=105.42 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=88.5
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++.+|||||||+ |..+..++...| +.+++++|+ +++++.|+++++..|+.++++++.+|..
T Consensus 188 ~~~~~~vLDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 250 (359)
T 1x19_A 188 LDGVKKMIDVGGGI---------------GDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIY 250 (359)
T ss_dssp CTTCCEEEEESCTT---------------CHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCEEEEECCcc---------------cHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccc
Confidence 45667999999999 999999999886 789999999 9999999999999999889999999997
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
+. + ...+|+|++... ......+++.+.+.|+|||.+++.+...
T Consensus 251 ~~-~-------~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 251 KE-S-------YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp TS-C-------CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred cC-C-------CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 64 1 233499987543 2336789999999999999997766544
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.12 E-value=1.2e-10 Score=114.85 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=83.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|||||||+ |..++.+++. + ..+|+++|+++ +++.|+++++.+|+.++++++++|+.+
T Consensus 157 ~~~~~VLDiGcGt---------------G~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 157 FKDKIVLDVGCGS---------------GILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp TTTCEEEEESCST---------------THHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred cCCCEEEEecCcc---------------cHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 4668999999999 9999988873 3 57999999998 999999999999998899999999976
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.. + .++||+|+.+.. .+...+.+..+.+.|+|||.+++
T Consensus 219 ~~--~-----~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 219 VS--L-----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CC--C-----SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred Cc--c-----CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 41 1 368999998754 24456677777899999999985
No 205
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.12 E-value=2.7e-11 Score=106.28 Aligned_cols=92 Identities=12% Similarity=0.084 Sum_probs=75.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++.. +.+|+++|+++++++.|+++ ..+++++++|+.+
T Consensus 47 ~~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~ 102 (226)
T 3m33_A 47 TPQTRVLEAGCGH---------------GPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKG 102 (226)
T ss_dssp CTTCEEEEESCTT---------------SHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCS
T ss_pred CCCCeEEEeCCCC---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhh
Confidence 4567999999999 9999999886 57999999999999999987 2369999999864
Q ss_pred hHHHHhhcCC-CCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 198 SLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 198 ~l~~l~~~~~-~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
.++. . .++||+|+... +...+++.+.+.|+|||.++
T Consensus 103 ~~~~-----~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 103 ELPA-----GLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SCCT-----TCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred ccCC-----cCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 3321 1 46899999874 34567788999999999998
No 206
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.12 E-value=6e-10 Score=95.41 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=82.7
Q ss_pred CCCCHHHHHHHHHHHhh---hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQI---LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~---~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
....+..+..+...+.. .++.+|||+|||+ |..+..++.. + ..+|+++|+++++++.|++
T Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~---------------G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~ 92 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGN---------------GILACGSYLL-G-AESVTAFDIDPDAIETAKR 92 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTT---------------CHHHHHHHHT-T-BSEEEEEESCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCc---------------cHHHHHHHHc-C-CCEEEEEECCHHHHHHHHH
Confidence 34556655555555543 3567999999999 9999998876 2 4589999999999999999
Q ss_pred HHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEec
Q 022597 178 YYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 178 ~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+++ +++++.+|+.+. .++||+|+.+++ ......+++.+.+.+ |+++++.+
T Consensus 93 ~~~------~~~~~~~d~~~~---------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 93 NCG------GVNFMVADVSEI---------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp HCT------TSEEEECCGGGC---------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEE
T ss_pred hcC------CCEEEECcHHHC---------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEc
Confidence 875 589999999763 368999999976 222457888888887 66665553
No 207
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.12 E-value=2.2e-10 Score=107.03 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=96.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+.....+++..++...++.+|||+|||+ |..++.++..+++.++|+++|++++.++.+++++++
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~---------------G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r 149 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAP---------------GNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR 149 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTT---------------CHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCCh---------------hHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 44555566777777777888999999999 999999999876678999999999999999999999
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc---------c------------------hHHHHHHHHhcc
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---------M------------------YQEYFELLLQLI 234 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~---------~------------------~~~~~~~~~~lL 234 (294)
.|+. +++++.+|+.+...... ..++||.|++|++.. + ..++++.+.+++
T Consensus 150 ~g~~-~v~~~~~D~~~~~~~~~---~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l 225 (309)
T 2b9e_A 150 AGVS-CCELAEEDFLAVSPSDP---RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP 225 (309)
T ss_dssp TTCC-SEEEEECCGGGSCTTCG---GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT
T ss_pred cCCC-eEEEEeCChHhcCcccc---ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 9985 59999999876532110 015799999986510 0 123566677778
Q ss_pred cCCeEEEEeccc
Q 022597 235 RVGGIIVIDNVL 246 (294)
Q Consensus 235 kpgG~ivid~vl 246 (294)
+ ||.++....-
T Consensus 226 ~-gG~lvYsTCs 236 (309)
T 2b9e_A 226 S-LQRLVYSTCS 236 (309)
T ss_dssp T-CCEEEEEESC
T ss_pred C-CCEEEEECCC
Confidence 6 9998887653
No 208
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.11 E-value=4.9e-10 Score=102.89 Aligned_cols=108 Identities=11% Similarity=0.068 Sum_probs=82.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC------CCCcEEEEE
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG------VSHKVKIKH 192 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g------l~~~v~~~~ 192 (294)
++.+|||+|||+ |..+..++.. ...+++++|+++++++.|++++...+ ...+++++.
T Consensus 34 ~~~~VLDlGcG~---------------G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 96 (313)
T 3bgv_A 34 RDITVLDLGCGK---------------GGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT 96 (313)
T ss_dssp -CCEEEEETCTT---------------TTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE
T ss_pred CCCEEEEECCCC---------------cHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEE
Confidence 567999999999 9988888873 36799999999999999999988753 234799999
Q ss_pred cchhhhHH--HHhhcCCCCceeEEEEcCCc-------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 193 GLAADSLK--ALILNGEASSYDFAFVDAEK-------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~--~l~~~~~~~~fD~vfiD~~~-------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+|+.+... .+. ...++||+|+....- .....+++.+.+.|+|||++++...
T Consensus 97 ~D~~~~~~~~~~~--~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 97 ADSSKELLIDKFR--DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CCTTTSCSTTTCS--STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ecccccchhhhcc--cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 99876410 010 013589999986432 3356899999999999999998654
No 209
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.10 E-value=1.9e-10 Score=99.69 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=77.8
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH----HHHHhCCCCcEEEEE
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK----YYERAGVSHKVKIKH 192 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~----~~~~~gl~~~v~~~~ 192 (294)
..++.+|||+|||+ |..+..++...| +++|+++|+++++++.+.+ +.+..++. ++++++
T Consensus 25 ~~~~~~vLDiGcG~---------------G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~ 87 (218)
T 3mq2_A 25 SQYDDVVLDVGTGD---------------GKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLW 87 (218)
T ss_dssp TTSSEEEEEESCTT---------------CHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEE
T ss_pred ccCCCEEEEecCCC---------------CHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEe
Confidence 45667999999999 999999999865 7899999999998875433 33345554 699999
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCc--------cchHHHHHHHHhcccCCeEEEEe
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEK--------RMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~--------~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+|+.+. +. ..++ |.+++.... .+...+++.+.+.|||||.+++.
T Consensus 88 ~d~~~l-~~-----~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 88 ATAERL-PP-----LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCSTTC-CS-----CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred cchhhC-CC-----CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 999763 21 1344 777654421 12378899999999999999984
No 210
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.10 E-value=1.8e-10 Score=100.73 Aligned_cols=99 Identities=10% Similarity=0.107 Sum_probs=81.4
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||+|||+ |..+..++.. +.+|+++|+++++++.++++. ...+++++.+|+.+.
T Consensus 53 ~~~~vLDiG~G~---------------G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~ 110 (242)
T 3l8d_A 53 KEAEVLDVGCGD---------------GYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSL 110 (242)
T ss_dssp TTCEEEEETCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBC
T ss_pred CCCeEEEEcCCC---------------CHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcC
Confidence 456999999999 9999999886 579999999999999988764 345799999998764
Q ss_pred HHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
. ...++||+|+.... ..+...+++.+.+.|+|||.+++...
T Consensus 111 ~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 111 P------FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp S------SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C------CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 1 12579999997643 34567899999999999999998764
No 211
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.09 E-value=1.7e-10 Score=94.69 Aligned_cols=101 Identities=19% Similarity=0.214 Sum_probs=75.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++...+++.+++++|+++ +.+. .++++..+|..+
T Consensus 21 ~~~~~vLd~G~G~---------------G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~ 73 (180)
T 1ej0_A 21 KPGMTVVDLGAAP---------------GGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRD 73 (180)
T ss_dssp CTTCEEEEESCTT---------------CHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTS
T ss_pred CCCCeEEEeCCCC---------------CHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEccccc
Confidence 4567999999999 999999999865568999999999 6432 469999999876
Q ss_pred hH--HHHhhcCCCCceeEEEEcCCcc---ch-----------HHHHHHHHhcccCCeEEEEecc
Q 022597 198 SL--KALILNGEASSYDFAFVDAEKR---MY-----------QEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l--~~l~~~~~~~~fD~vfiD~~~~---~~-----------~~~~~~~~~lLkpgG~ivid~v 245 (294)
.. ..+....+.++||+|+.+.... .. ..+++.+.++|+|||.+++...
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 42 1111000247899999976421 11 6889999999999999997543
No 212
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=3.2e-10 Score=94.96 Aligned_cols=105 Identities=11% Similarity=0.152 Sum_probs=82.8
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
..++..+ ..++.+|||+|||+ |..+..++.. +.+++++|+++++++.+++++. +
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~------~ 90 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQ---------------GRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP------E 90 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTT---------------THHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT------T
T ss_pred HHHHHHh--ccCCCeEEEECCCC---------------CHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC------C
Confidence 4455555 33667999999999 9999998886 5799999999999999988763 4
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEec
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++++.+|..+.. + ..++||+|+.... ......+++.+.+.|+|||.+++..
T Consensus 91 ~~~~~~d~~~~~--~----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 91 ARWVVGDLSVDQ--I----SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp SEEEECCTTTSC--C----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEcccccCC--C----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 889999987531 1 1478999998732 2345789999999999999999864
No 213
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.09 E-value=4.4e-10 Score=104.16 Aligned_cols=109 Identities=15% Similarity=0.150 Sum_probs=76.9
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC-----cEEEEEcc
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-----KVKIKHGL 194 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~-----~v~~~~gd 194 (294)
+.+|||||||+ |.....++.. ..++|+|+|+++++++.|++.++..+... ++++..+|
T Consensus 49 ~~~VLDlGCG~---------------G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d 111 (302)
T 2vdw_A 49 KRKVLAIDFGN---------------GADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQET 111 (302)
T ss_dssp CCEEEETTCTT---------------TTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECC
T ss_pred CCeEEEEecCC---------------cHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhh
Confidence 56999999999 8654444442 24799999999999999999998776532 26777777
Q ss_pred hhhhH--HHHhhcCCCCceeEEEEcCC------ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSL--KALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l--~~l~~~~~~~~fD~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..... ..+......++||+|+.-.. ..+...+++.+.++|||||++++...
T Consensus 112 ~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 112 IRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 62110 11211112579999975321 23457999999999999999998755
No 214
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=2.8e-10 Score=96.03 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=79.4
Q ss_pred CCHHHHHHHHHHHhh--hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 103 VSPDQAQLLAMLVQI--LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 103 v~~~~~~lL~~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
-.|+...++.. +.. .++.+|||+|||+ |..+..++... +|+++|+|+++++.
T Consensus 6 P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~---------------G~~~~~l~~~~----~v~gvD~s~~~~~~------ 59 (170)
T 3q87_B 6 PGEDTYTLMDA-LEREGLEMKIVLDLGTST---------------GVITEQLRKRN----TVVSTDLNIRALES------ 59 (170)
T ss_dssp CCHHHHHHHHH-HHHHTCCSCEEEEETCTT---------------CHHHHHHTTTS----EEEEEESCHHHHHT------
T ss_pred cCccHHHHHHH-HHhhcCCCCeEEEeccCc---------------cHHHHHHHhcC----cEEEEECCHHHHhc------
Confidence 35666666666 444 5677999999999 99999888753 99999999999876
Q ss_pred HhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc------------chHHHHHHHHhcccCCeEEEEec
Q 022597 181 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR------------MYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~------------~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
..+++++.+|+.+.++ .++||+|+.+.+-. ....+++.+.+.+ |||.+++-.
T Consensus 60 ----~~~~~~~~~d~~~~~~-------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 60 ----HRGGNLVRADLLCSIN-------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp ----CSSSCEEECSTTTTBC-------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ----ccCCeEEECChhhhcc-------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 3568999999976321 37899999986521 2356777777777 999998754
No 215
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.08 E-value=4.2e-11 Score=105.95 Aligned_cols=110 Identities=14% Similarity=0.116 Sum_probs=82.0
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC-------------
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV------------- 184 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl------------- 184 (294)
.++.+|||+|||+ |..+..++.... .+|+++|+++++++.|+++++..+.
T Consensus 55 ~~~~~vLDlGcG~---------------G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 2i62_A 55 VKGELLIDIGSGP---------------TIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCD 117 (265)
T ss_dssp CCEEEEEEESCTT---------------CCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHH
T ss_pred cCCCEEEEECCCc---------------cHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhc
Confidence 3456999999999 988887776422 4899999999999999998865431
Q ss_pred ---------------CCcE-EEEEcchhhhHHHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEE
Q 022597 185 ---------------SHKV-KIKHGLAADSLKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 185 ---------------~~~v-~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~iv 241 (294)
..++ ++..+|+.+..... ....++||+|+.... ...+..+++.+.++|+|||.++
T Consensus 118 ~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li 195 (265)
T 2i62_A 118 LEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLG--GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLV 195 (265)
T ss_dssp HTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTT--TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ccccccchHHHHHHhhhhheeEEEeeeccCCCCC--ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEE
Confidence 1137 89999987642210 001278999997543 2367889999999999999999
Q ss_pred Eeccc
Q 022597 242 IDNVL 246 (294)
Q Consensus 242 id~vl 246 (294)
+...+
T Consensus 196 ~~~~~ 200 (265)
T 2i62_A 196 MVDAL 200 (265)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 97754
No 216
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.08 E-value=2.9e-09 Score=97.13 Aligned_cols=113 Identities=9% Similarity=0.028 Sum_probs=82.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
+..+|||||||+ +-+|..+..+.+..+ +++|+++|+|+.+++.|++++.. ..+++++.+|..+.
T Consensus 77 ~~~~vLDlGcG~------------pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 77 GISQFLDLGSGL------------PTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDP 140 (274)
T ss_dssp CCCEEEEETCCS------------CCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCC------------CCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCc
Confidence 457999999997 333555555555444 78999999999999999998843 35799999999763
Q ss_pred HHH-----HhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 199 LKA-----LILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 199 l~~-----l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
... +....+.++||+|++..- ......+++.+.+.|+|||++++.+...
T Consensus 141 ~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 141 EYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 210 001112358999987542 2247889999999999999999987653
No 217
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=8.8e-11 Score=105.18 Aligned_cols=110 Identities=20% Similarity=0.140 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC
Q 022597 104 SPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 183 (294)
Q Consensus 104 ~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g 183 (294)
.+...+.+...+...++.+|||||||+ |..+..++. ++.+|+++|+++.+++.|++..
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~---------------G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~---- 76 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGT---------------GGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP---- 76 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTT---------------SHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT----
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcc---------------cHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc----
Confidence 344444455555555678999999999 999999886 3689999999999888766543
Q ss_pred CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 184 VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 184 l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++++.+|+.+.. + +.++||+|+.... ..+...+++.+.+.|+ ||.+++.+.
T Consensus 77 ---~~~~~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 77 ---QVEWFTGYAENLA--L----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp ---TEEEECCCTTSCC--S----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred ---CCEEEECchhhCC--C----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 6999999986531 1 2578999998653 3567899999999999 997666554
No 218
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=4.9e-10 Score=98.63 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=81.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++...+ +|+++|+++.+++.|++++. ..+++++.+|+.+
T Consensus 55 ~~~~~vLD~GcG~---------------G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~ 112 (245)
T 3ggd_A 55 NPELPLIDFACGN---------------GTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLV 112 (245)
T ss_dssp CTTSCEEEETCTT---------------SHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTC
T ss_pred CCCCeEEEEcCCC---------------CHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECcccc
Confidence 4557999999999 999999999754 89999999999999998772 2379999999977
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
........ ...+||+|+.... ..+...+++.+.+.|+|||.+++-+.
T Consensus 113 ~~~~~~~~-~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 113 PEQAAQIH-SEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHHH-HHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccccccc-cccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 43221000 0135999987642 34678999999999999998776554
No 219
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.07 E-value=8.8e-10 Score=95.93 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=79.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++... .+++++|+++++++.|++++ .+++++.+|+.+
T Consensus 39 ~~~~~vLdiG~G~---------------G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~ 94 (239)
T 3bxo_A 39 PEASSLLDVACGT---------------GTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRD 94 (239)
T ss_dssp TTCCEEEEETCTT---------------SHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTT
T ss_pred CCCCeEEEecccC---------------CHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHH
Confidence 3567999999999 99999999875 38999999999999998864 358999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.. . .++||+|+.... ......+++.+.+.|+|||.++++...
T Consensus 95 ~~--~-----~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 95 FR--L-----GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp CC--C-----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cc--c-----CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 31 1 468999994321 245678999999999999999998643
No 220
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.06 E-value=1.8e-10 Score=99.01 Aligned_cols=95 Identities=17% Similarity=0.161 Sum_probs=76.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
++.+|||+|||+ |..+..+ +. +++++|+++++++.|++++ .+++++.+|+.+
T Consensus 36 ~~~~vLdiG~G~---------------G~~~~~l------~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~ 88 (211)
T 2gs9_A 36 PGESLLEVGAGT---------------GYWLRRL------PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEA 88 (211)
T ss_dssp CCSEEEEETCTT---------------CHHHHHC------CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTS
T ss_pred CCCeEEEECCCC---------------CHhHHhC------CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEccccc
Confidence 456999999999 9877766 34 8999999999999998876 468899998865
Q ss_pred hHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 198 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.. ...++||+|+.... ..+...+++.+.+.|+|||.+++....
T Consensus 89 ~~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 89 LP------FPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp CC------SCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CC------CCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 31 12468999997643 345788999999999999999987653
No 221
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.06 E-value=9.6e-10 Score=106.63 Aligned_cols=121 Identities=14% Similarity=0.215 Sum_probs=91.6
Q ss_pred CCCCHH-HHHHHHHHHhhh---CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHH
Q 022597 101 MQVSPD-QAQLLAMLVQIL---GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAK 176 (294)
Q Consensus 101 ~~v~~~-~~~lL~~l~~~~---~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~ 176 (294)
.+..+. ...++..++... ++.+|||+|||+ |..++.++.. ..+|+++|+++++++.|+
T Consensus 264 ~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~---------------G~~~~~la~~---~~~V~gvD~s~~al~~A~ 325 (433)
T 1uwv_A 264 IQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGM---------------GNFTLPLATQ---AASVVGVEGVPALVEKGQ 325 (433)
T ss_dssp CCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTT---------------TTTHHHHHTT---SSEEEEEESCHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCC---------------CHHHHHHHhh---CCEEEEEeCCHHHHHHHH
Confidence 344444 444555554433 557999999999 9999999876 579999999999999999
Q ss_pred HHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 177 KYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 177 ~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
++++.+|+. +++++.+|+.+.++.+.. ..++||+|++|++.....+.++.+.+ ++|++++++.
T Consensus 326 ~n~~~~~~~-~v~f~~~d~~~~l~~~~~--~~~~fD~Vv~dPPr~g~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 326 QNARLNGLQ-NVTFYHENLEEDVTKQPW--AKNGFDKVLLDPARAGAAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp HHHHHTTCC-SEEEEECCTTSCCSSSGG--GTTCCSEEEECCCTTCCHHHHHHHHH-HCCSEEEEEE
T ss_pred HHHHHcCCC-ceEEEECCHHHHhhhhhh--hcCCCCEEEECCCCccHHHHHHHHHh-cCCCeEEEEE
Confidence 999999987 799999999875432110 13689999999986655566666554 7899988764
No 222
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.06 E-value=1.5e-10 Score=98.87 Aligned_cols=102 Identities=9% Similarity=0.092 Sum_probs=81.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++...+ .+++++|+++.+++.|+++.+. ..+++++.+|+.+
T Consensus 41 ~~~~~vLdiGcG~---------------G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~ 100 (215)
T 2pxx_A 41 RPEDRILVLGCGN---------------SALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRK 100 (215)
T ss_dssp CTTCCEEEETCTT---------------CSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTS
T ss_pred CCCCeEEEECCCC---------------cHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhc
Confidence 3566999999999 999999988633 3899999999999999998764 2479999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCC------------------ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE------------------KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~------------------~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
. + + ..++||+|+.... ......+++.+.+.|+|||.+++-..
T Consensus 101 ~-~-~----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 101 L-D-F----PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp C-C-S----CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred C-C-C----CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 4 1 1 2478999997532 12457889999999999999998654
No 223
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.05 E-value=2.5e-10 Score=104.07 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=79.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHH-------CCC----CcEEEEEeCCh--------------HHHH
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALV-------LPE----SGCLVACERDA--------------RSLE 173 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~-------~~~----~~~v~~id~~~--------------~~~~ 173 (294)
++.+|||||+|+ |+.++++++. .|. ..+++++|.+| +..+
T Consensus 60 ~~~~ILEiGfGt---------------G~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~ 124 (257)
T 2qy6_A 60 PLFVVAESGFGT---------------GLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAP 124 (257)
T ss_dssp SEEEEEESCCTT---------------SHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHH
T ss_pred CCCEEEEECCCh---------------HHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHH
Confidence 345999999999 9999998776 342 25899999987 3344
Q ss_pred HHHHHHHHh----------CCC---CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----c-chHHHHHHHHhcc
Q 022597 174 VAKKYYERA----------GVS---HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----R-MYQEYFELLLQLI 234 (294)
Q Consensus 174 ~A~~~~~~~----------gl~---~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~-----~-~~~~~~~~~~~lL 234 (294)
.|++.++.. ++. .+++++.||+.+.++.+.... ..+||+||+|+.. + .+.++|+.+.++|
T Consensus 125 ~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~-~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L 203 (257)
T 2qy6_A 125 WAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSL-NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLA 203 (257)
T ss_dssp HHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGG-TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHE
T ss_pred HHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhccccc-CCeEEEEEECCCCcccChhhcCHHHHHHHHHHc
Confidence 667776641 122 468899999999877652110 1379999999742 1 2688999999999
Q ss_pred cCCeEEEE
Q 022597 235 RVGGIIVI 242 (294)
Q Consensus 235 kpgG~ivi 242 (294)
+|||+++.
T Consensus 204 ~pGG~l~t 211 (257)
T 2qy6_A 204 RPGGTLAT 211 (257)
T ss_dssp EEEEEEEE
T ss_pred CCCcEEEE
Confidence 99999985
No 224
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.05 E-value=3.3e-10 Score=103.61 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=74.0
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
+...++.+|||+|||+ |..++.++.. +.+|+++|+|+++++.|+++++.. .+.....+
T Consensus 41 l~l~~g~~VLDlGcGt---------------G~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~ 98 (261)
T 3iv6_A 41 ENIVPGSTVAVIGAST---------------RFLIEKALER---GASVTVFDFSQRMCDDLAEALADR----CVTIDLLD 98 (261)
T ss_dssp TTCCTTCEEEEECTTC---------------HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECC
T ss_pred cCCCCcCEEEEEeCcc---------------hHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc----cceeeeee
Confidence 3445667999999999 9999999875 579999999999999999987654 12222222
Q ss_pred hhh-hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEe
Q 022597 195 AAD-SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 195 a~~-~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
... ....+ .++||+|+++.. .......++.+.++| |||.+++.
T Consensus 99 ~~~~~~~~~-----~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 99 ITAEIPKEL-----AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp TTSCCCGGG-----TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ccccccccc-----CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 211 00111 478999998754 334567888999999 99999986
No 225
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.01 E-value=8.2e-10 Score=98.63 Aligned_cols=96 Identities=16% Similarity=0.168 Sum_probs=76.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++.+|||||||+ |..+..++.. +.+++++|+++++++.|+++.. .. ++.+|+.+.
T Consensus 54 ~~~~vLDiGcG~---------------G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGT---------------GKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTT---------------CHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC
T ss_pred CCCeEEEeCCCc---------------CHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC
Confidence 567999999999 9999988875 5799999999999999988754 12 778887653
Q ss_pred HHHHhhcCCCCceeEEEEcCC----ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 199 LKALILNGEASSYDFAFVDAE----KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~----~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
. + ..++||+|+.... ..+...+++.+.+.|+|||.+++...
T Consensus 109 ~--~----~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 109 P--F----PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp C--S----CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C--C----CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1 1 2578999998643 24478899999999999999998643
No 226
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.01 E-value=2e-10 Score=103.38 Aligned_cols=109 Identities=16% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC--C------------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--V------------ 184 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g--l------------ 184 (294)
++.+|||||||+ |..+..++.. ...+|+++|+|+.+++.|+++++... +
T Consensus 55 ~g~~vLDiGCG~---------------G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~ 117 (263)
T 2a14_A 55 QGDTLIDIGSGP---------------TIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACEL 117 (263)
T ss_dssp CEEEEEESSCTT---------------CCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHH
T ss_pred CCceEEEeCCCc---------------cHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhc
Confidence 456999999999 8665544432 12479999999999999999876532 1
Q ss_pred --------------CCcEE-EEEcchhhhHHHHhhcCCCCceeEEEEcC-------CccchHHHHHHHHhcccCCeEEEE
Q 022597 185 --------------SHKVK-IKHGLAADSLKALILNGEASSYDFAFVDA-------EKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 185 --------------~~~v~-~~~gda~~~l~~l~~~~~~~~fD~vfiD~-------~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+++ ++.+|..+..+ + .....++||+|+... ..+++...++.+.++|||||.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~-~-~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 118 EGNSGRWEEKEEKLRAAVKRVLKCDVHLGNP-L-APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp TTCGGGHHHHHHHHHHHEEEEEECCTTSSST-T-TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCcchhhHHHHHHhhhheEEeccccCCCC-C-CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 11344 78888765311 0 001146899998752 235677889999999999999999
Q ss_pred eccc
Q 022597 243 DNVL 246 (294)
Q Consensus 243 d~vl 246 (294)
...+
T Consensus 196 ~~~~ 199 (263)
T 2a14_A 196 TVTL 199 (263)
T ss_dssp EEES
T ss_pred EEee
Confidence 8654
No 227
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.00 E-value=4.9e-10 Score=100.13 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHhh--hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 105 PDQAQLLAMLVQI--LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 105 ~~~~~lL~~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+....+...+... .++.+|||+|||+ |..+..++...+ +.+|+++|+++++++.|+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~---------------G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~--- 129 (269)
T 1p91_A 69 PLRDAIVAQLRERLDDKATAVLDIGCGE---------------GYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY--- 129 (269)
T ss_dssp HHHHHHHHHHHHHSCTTCCEEEEETCTT---------------STTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCC---------------CHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC---
Confidence 4444444444443 3567999999999 999999999774 679999999999999998764
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.++++..+|+.+.. + ..++||+|+..... ..++.+.++|+|||.+++..
T Consensus 130 ---~~~~~~~~d~~~~~--~----~~~~fD~v~~~~~~----~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 130 ---PQVTFCVASSHRLP--F----SDTSMDAIIRIYAP----CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ---TTSEEEECCTTSCS--B----CTTCEEEEEEESCC----CCHHHHHHHEEEEEEEEEEE
T ss_pred ---CCcEEEEcchhhCC--C----CCCceeEEEEeCCh----hhHHHHHHhcCCCcEEEEEE
Confidence 35789999886531 1 14789999975443 34778899999999998854
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.00 E-value=2e-09 Score=98.76 Aligned_cols=95 Identities=18% Similarity=0.178 Sum_probs=77.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
+..++...+.+...+...++.+|||||||+ |..+..++.. +.+|+++|+|+++++.++++++
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~---------------G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~ 71 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGT---------------GNMTVKLLEK---AKKVVACELDPRLVAELHKRVQ 71 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTT---------------STTHHHHHHH---SSEEEEEESCHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcc---------------cHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHH
Confidence 345676666666666666778999999999 9999999987 4699999999999999999998
Q ss_pred HhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc
Q 022597 181 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR 221 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~ 221 (294)
..+..++++++++|+.+.. ..+||.|+.+.+..
T Consensus 72 ~~~~~~~v~~~~~D~~~~~--------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 72 GTPVASKLQVLVGDVLKTD--------LPFFDTCVANLPYQ 104 (285)
T ss_dssp TSTTGGGEEEEESCTTTSC--------CCCCSEEEEECCGG
T ss_pred hcCCCCceEEEEcceeccc--------chhhcEEEEecCcc
Confidence 7777678999999997541 24799999987643
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.99 E-value=2.5e-09 Score=100.12 Aligned_cols=117 Identities=12% Similarity=0.038 Sum_probs=91.1
Q ss_pred CCHHHHHHHHHHHhh----hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCC----cEEEEEeCChHHHHH
Q 022597 103 VSPDQAQLLAMLVQI----LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPES----GCLVACERDARSLEV 174 (294)
Q Consensus 103 v~~~~~~lL~~l~~~----~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~----~~v~~id~~~~~~~~ 174 (294)
.++....++..++.. .++.+|||+|||+ |..++.++..++.. .+++|+|+++.+++.
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGs---------------G~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~ 174 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGT---------------ANLLTTVINQLELKGDVDVHASGVDVDDLLISL 174 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTT---------------SHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHH
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCc---------------cHHHHHHHHHHHHhcCCCceEEEEECCHHHHHH
Confidence 344556666666542 2456999999999 99999998887533 789999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc---------------------chHHHHHHHHhc
Q 022597 175 AKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---------------------MYQEYFELLLQL 233 (294)
Q Consensus 175 A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~---------------------~~~~~~~~~~~l 233 (294)
|+.++...|+ +++++++|+.+.. ..++||+|+.+++-. .+..+++.+.+.
T Consensus 175 a~~n~~~~g~--~~~i~~~D~l~~~-------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 245 (344)
T 2f8l_A 175 ALVGADLQRQ--KMTLLHQDGLANL-------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY 245 (344)
T ss_dssp HHHHHHHHTC--CCEEEESCTTSCC-------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT
T ss_pred HHHHHHhCCC--CceEEECCCCCcc-------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH
Confidence 9999998887 5899999986531 147899999997611 123689999999
Q ss_pred ccCCeEEEEe
Q 022597 234 IRVGGIIVID 243 (294)
Q Consensus 234 LkpgG~ivid 243 (294)
|+|||.+++-
T Consensus 246 Lk~gG~~~~v 255 (344)
T 2f8l_A 246 TKPGGYLFFL 255 (344)
T ss_dssp EEEEEEEEEE
T ss_pred hCCCCEEEEE
Confidence 9999988763
No 230
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.98 E-value=6.8e-10 Score=100.65 Aligned_cols=111 Identities=11% Similarity=0.044 Sum_probs=75.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh----------------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA---------------- 182 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~---------------- 182 (294)
++.+|||||||+ |..+..++. ..+.+|+++|+++++++.|+++++..
T Consensus 71 ~~~~vLDiGcG~---------------G~~~~l~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~ 133 (289)
T 2g72_A 71 SGRTLIDIGSGP---------------TVYQLLSAC--SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLI 133 (289)
T ss_dssp CCSEEEEETCTT---------------CCGGGTTGG--GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCc---------------ChHHHHhhc--cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHh
Confidence 567999999999 883332222 22579999999999999999876431
Q ss_pred -CCC------------CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-------ccchHHHHHHHHhcccCCeEEEE
Q 022597 183 -GVS------------HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 183 -gl~------------~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-------~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
|.. ..++++.+|+.+.++.-....+.++||+|+.... ..++...++.+.++|||||.+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~ 213 (289)
T 2g72_A 134 EGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213 (289)
T ss_dssp HCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 111 0256677777652210000012467999987643 23578899999999999999999
Q ss_pred eccc
Q 022597 243 DNVL 246 (294)
Q Consensus 243 d~vl 246 (294)
...+
T Consensus 214 ~~~~ 217 (289)
T 2g72_A 214 IGAL 217 (289)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7543
No 231
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.94 E-value=2.8e-09 Score=99.19 Aligned_cols=105 Identities=15% Similarity=0.221 Sum_probs=86.1
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--C--CCCcEEEEEc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--G--VSHKVKIKHG 193 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--g--l~~~v~~~~g 193 (294)
.++++||-||.|. |.....+++.. +..+|+.||+|++.++.+++++... | -+.|++++.+
T Consensus 82 p~pk~VLIiGgGd---------------G~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~ 145 (294)
T 3o4f_A 82 GHAKHVLIIGGGD---------------GAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp SCCCEEEEESCTT---------------SHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred CCCCeEEEECCCc---------------hHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEec
Confidence 4678999999999 88887777753 3679999999999999999998642 2 1468999999
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCcc-------chHHHHHHHHhcccCCeEEEEe
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~-------~~~~~~~~~~~lLkpgG~ivid 243 (294)
|+.+.++.. .++||+|++|...+ .-.++++.+.+.|+|||+++..
T Consensus 146 Dg~~~l~~~-----~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 146 DGVNFVNQT-----SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CTTTTTSCS-----SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred hHHHHHhhc-----cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 999887543 57899999996521 2468999999999999999974
No 232
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.93 E-value=3e-09 Score=99.52 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=81.6
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..+..+|||||||+ |..+..+++..| +.+++++|+ ++.+. +++.+..++.++++++.+|+.
T Consensus 182 ~~~~~~vLDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~ 242 (348)
T 3lst_A 182 FPATGTVADVGGGR---------------GGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL 242 (348)
T ss_dssp CCSSEEEEEETCTT---------------SHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT
T ss_pred ccCCceEEEECCcc---------------CHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC
Confidence 34567999999999 999999999887 778999999 44444 444555677789999999986
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
+. + . +||+|++..- ......+++.+.+.|+|||.+++.+..+..
T Consensus 243 ~~---~-----p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 243 RE---V-----P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp TC---C-----C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CC---C-----C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 32 1 3 8999987532 233478999999999999999987765544
No 233
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.93 E-value=8.8e-10 Score=100.28 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=74.1
Q ss_pred HHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCCh-------HHHHHHHHHHHH
Q 022597 109 QLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDA-------RSLEVAKKYYER 181 (294)
Q Consensus 109 ~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~-------~~~~~A~~~~~~ 181 (294)
+++...+...++.+|||+|||+ |..++.++.. +++|+++|+++ ++++.|+++.+.
T Consensus 73 ~~l~~a~~~~~~~~VLDlgcG~---------------G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~ 134 (258)
T 2r6z_A 73 ELIAKAVNHTAHPTVWDATAGL---------------GRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPET 134 (258)
T ss_dssp CHHHHHTTGGGCCCEEETTCTT---------------CHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHH
T ss_pred HHHHHHhCcCCcCeEEEeeCcc---------------CHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHh
Confidence 3444444445567999999999 9999999984 57999999999 999999999998
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~ 219 (294)
+|+.++++++++|+.+.++.+... .++||+|++|+.
T Consensus 135 ~~~~~ri~~~~~d~~~~l~~~~~~--~~~fD~V~~dP~ 170 (258)
T 2r6z_A 135 QDTAARINLHFGNAAEQMPALVKT--QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHTTEEEEESCHHHHHHHHHHH--HCCCSEEEECCC
T ss_pred hCCccCeEEEECCHHHHHHhhhcc--CCCccEEEECCC
Confidence 888778999999999887655210 168999999974
No 234
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.92 E-value=4.1e-09 Score=89.77 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=71.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
++.+|||+|||+ |..+..++...++ +++|+++|+++.. .. .+++++++|+.+
T Consensus 22 ~~~~vLDlGcG~---------------G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~ 74 (201)
T 2plw_A 22 KNKIILDIGCYP---------------GSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGK 74 (201)
T ss_dssp TTEEEEEESCTT---------------CHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTT
T ss_pred CCCEEEEeCCCC---------------CHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccc
Confidence 456999999999 9999999998864 6899999999941 12 468999999865
Q ss_pred hH-------------------HHHhhcCCCCceeEEEEcCCcc-------ch-------HHHHHHHHhcccCCeEEEEe
Q 022597 198 SL-------------------KALILNGEASSYDFAFVDAEKR-------MY-------QEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l-------------------~~l~~~~~~~~fD~vfiD~~~~-------~~-------~~~~~~~~~lLkpgG~ivid 243 (294)
.. ..+....+.++||+|+.+.... +. ...++.+.++|+|||.+++.
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 75 DNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp TSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 42 0110001246899999875311 11 23677888999999999984
No 235
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.92 E-value=1.1e-08 Score=96.44 Aligned_cols=105 Identities=11% Similarity=0.113 Sum_probs=83.3
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..+..+|+|||||+ |..+..+++..| +.+++..|+ |+.++.|+++++..+ .++|+++.+|..
T Consensus 177 ~~~~~~v~DvGgG~---------------G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~ 238 (353)
T 4a6d_A 177 LSVFPLMCDLGGGA---------------GALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFF 238 (353)
T ss_dssp GGGCSEEEEETCTT---------------SHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTT
T ss_pred cccCCeEEeeCCCC---------------CHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccc
Confidence 45667999999999 999999999987 778999997 889999999887555 679999999986
Q ss_pred hhHHHHhhcCCCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 197 DSLKALILNGEASSYDFAFVDA-----EKRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~-----~~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
+. +...+|++++-. +.+....+++.+.+.|+|||.+++.+.+.
T Consensus 239 ~~--------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 239 KD--------PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp TS--------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred cC--------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 42 135689998642 23345688999999999999888766544
No 236
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.92 E-value=1.9e-09 Score=93.77 Aligned_cols=98 Identities=23% Similarity=0.355 Sum_probs=76.2
Q ss_pred HHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 113 MLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 113 ~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
.+....++.+|||+|||+ |..+..++.. +++|+++++++.++++ +++++.
T Consensus 41 ~l~~~~~~~~vLDiG~G~---------------G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~ 90 (219)
T 1vlm_A 41 AVKCLLPEGRGVEIGVGT---------------GRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLK 90 (219)
T ss_dssp HHHHHCCSSCEEEETCTT---------------STTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEE
T ss_pred HHHHhCCCCcEEEeCCCC---------------CHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEE
Confidence 344444577999999999 9887776542 9999999999998876 478899
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
+|+.+.. + ..++||+|+.... ..+...+++.+.+.|+|||.+++....
T Consensus 91 ~d~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 91 GTAENLP--L----KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp CBTTBCC--S----CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccCC--C----CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 9886531 1 2468999998754 345688999999999999999997653
No 237
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.90 E-value=1.3e-09 Score=93.70 Aligned_cols=97 Identities=15% Similarity=0.089 Sum_probs=75.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..++.. +.+++++|+++++++.++++. .++..+|+.+
T Consensus 31 ~~~~~vLdiG~G~---------------G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~ 84 (230)
T 3cc8_A 31 KEWKEVLDIGCSS---------------GALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIET 84 (230)
T ss_dssp TTCSEEEEETCTT---------------SHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTT
T ss_pred cCCCcEEEeCCCC---------------CHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhh
Confidence 3567999999999 9999998876 389999999999998887654 2678888764
Q ss_pred hHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEec
Q 022597 198 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
....+ ..++||+|+.... ..+...+++.+.+.|+|||.+++..
T Consensus 85 ~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 85 MDMPY----EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp CCCCS----CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred cCCCC----CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 21111 2478999998643 2345789999999999999999864
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.90 E-value=3.8e-09 Score=97.61 Aligned_cols=91 Identities=15% Similarity=0.241 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
+++...+.+...+...++.+|||+|||+ |..+..++.. +++|+++|+++++++.|+++++..
T Consensus 26 ~~~~i~~~i~~~~~~~~~~~VLDiG~G~---------------G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~ 87 (299)
T 2h1r_A 26 KNPGILDKIIYAAKIKSSDIVLEIGCGT---------------GNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYE 87 (299)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTT---------------STTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEEcCcC---------------cHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHc
Confidence 4555444444555555667999999999 9999988874 579999999999999999999888
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK 220 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~ 220 (294)
++ ++++++.+|+.+.. .++||.|+.+.+.
T Consensus 88 ~~-~~v~~~~~D~~~~~--------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 88 GY-NNLEVYEGDAIKTV--------FPKFDVCTANIPY 116 (299)
T ss_dssp TC-CCEEC----CCSSC--------CCCCSEEEEECCG
T ss_pred CC-CceEEEECchhhCC--------cccCCEEEEcCCc
Confidence 87 57999999987541 3589999998763
No 239
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.89 E-value=8e-09 Score=95.35 Aligned_cols=114 Identities=13% Similarity=0.060 Sum_probs=78.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcH--HHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGY--SSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~--~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+..++||||||+ |. .+..+++...++++|+++|.|+.+++.|++.+...+ ..+++++++|.
T Consensus 77 ~g~~q~LDLGcG~---------------pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~ 140 (277)
T 3giw_A 77 AGIRQFLDIGTGI---------------PTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADM 140 (277)
T ss_dssp SCCCEEEEESCCS---------------CCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCT
T ss_pred cCCCEEEEeCCCC---------------CcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecc
Confidence 4557999999996 32 345566554458999999999999999999887543 34799999999
Q ss_pred hhhHHHHhhcCCCCcee-----EEEEcCC------ccchHHHHHHHHhcccCCeEEEEecccC
Q 022597 196 ADSLKALILNGEASSYD-----FAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD-----~vfiD~~------~~~~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
.+.-..+......+.|| .|++.+- ......+++.+.+.|+|||++++.....
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 87532110000013455 3555432 1124689999999999999999987643
No 240
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.89 E-value=1.7e-09 Score=103.27 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=74.6
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..++.. +.+|+++|+++++++.|++. ++.....+...+..+
T Consensus 106 ~~~~~VLDiGcG~---------------G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~ 163 (416)
T 4e2x_A 106 GPDPFIVEIGCND---------------GIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATAD 163 (416)
T ss_dssp SSSCEEEEETCTT---------------TTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHH
T ss_pred CCCCEEEEecCCC---------------CHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHh
Confidence 3566999999999 9998888874 56999999999999988875 444322222222222
Q ss_pred hHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 198 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.++.. .++||+|+.... ..+...+++.+.++|+|||++++...
T Consensus 164 ~l~~~-----~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 164 DVRRT-----EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHHHH-----HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcccC-----CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 23221 479999997654 34678999999999999999999743
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.88 E-value=2e-09 Score=102.27 Aligned_cols=111 Identities=15% Similarity=0.229 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 100 ~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
+.-.++...+.+..++...++.+|||+|||+ |..++.+++..+...+++|+|+++++++.|
T Consensus 20 ~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGt---------------G~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---- 80 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEAPRGGRVLEPACAH---------------GPFLRAFREAHGTAYRFVGVEIDPKALDLP---- 80 (421)
T ss_dssp -CCCCHHHHHHHHHHCCCCTTCEEEEETCTT---------------CHHHHHHHHHHCSCSEEEEEESCTTTCCCC----
T ss_pred eEeCCHHHHHHHHHhhccCCCCEEEECCCCC---------------hHHHHHHHHHhCCCCeEEEEECCHHHHHhC----
Confidence 3345566666666666544566999999999 999999998764468999999999998776
Q ss_pred HHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--------------c------------------chHHHH
Q 022597 180 ERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--------------R------------------MYQEYF 227 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--------------~------------------~~~~~~ 227 (294)
++++++++|+.+... .++||+|+.+++- . .+..++
T Consensus 81 ------~~~~~~~~D~~~~~~-------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl 147 (421)
T 2ih2_A 81 ------PWAEGILADFLLWEP-------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFL 147 (421)
T ss_dssp ------TTEEEEESCGGGCCC-------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHH
T ss_pred ------CCCcEEeCChhhcCc-------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHH
Confidence 479999999976421 4689999997541 0 123678
Q ss_pred HHHHhcccCCeEEEE
Q 022597 228 ELLLQLIRVGGIIVI 242 (294)
Q Consensus 228 ~~~~~lLkpgG~ivi 242 (294)
+.+.++|+|||.+++
T Consensus 148 ~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 148 EKAVRLLKPGGVLVF 162 (421)
T ss_dssp HHHHHHEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEE
Confidence 889999999998776
No 242
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.88 E-value=4e-09 Score=91.18 Aligned_cols=95 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||+|||+ |..+..+++. +++|+++|+++.. .. .+++++++|+.+
T Consensus 24 ~~g~~VLDlG~G~---------------G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~ 73 (191)
T 3dou_A 24 RKGDAVIEIGSSP---------------GGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFK 73 (191)
T ss_dssp CTTCEEEEESCTT---------------CHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTS
T ss_pred CCCCEEEEEeecC---------------CHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccC
Confidence 3567999999999 9999988875 6899999999851 12 469999999865
Q ss_pred hH--H---H-HhhcCCCCceeEEEEcCCcc--------------chHHHHHHHHhcccCCeEEEEe
Q 022597 198 SL--K---A-LILNGEASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l--~---~-l~~~~~~~~fD~vfiD~~~~--------------~~~~~~~~~~~lLkpgG~ivid 243 (294)
.. . . +...+ .++||+|+.|.... .....++.+.++|+|||.+++.
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 74 ETIFDDIDRALREEG-IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp SSHHHHHHHHHHHHT-CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHhhccc-CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 31 1 1 10001 14899999986421 1245677778999999999975
No 243
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.87 E-value=6.6e-09 Score=99.99 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-----------------------
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE----------------------- 158 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~----------------------- 158 (294)
.+.+..+..|..++...+...+||.+||+ |...+..+.....
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGS---------------Gt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~ 248 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGS---------------GTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWA 248 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTT---------------SHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHH
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCC---------------CHHHHHHHHHhcCcCCCccccchhhccccCCHHHHH
Confidence 35566666666666666778999999999 9888877764321
Q ss_pred --------------CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc----
Q 022597 159 --------------SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK---- 220 (294)
Q Consensus 159 --------------~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~---- 220 (294)
..+|+++|+|+++++.|+++++.+|+.+++++.++|+.+... .++||+|+.|++-
T Consensus 249 ~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl 321 (393)
T 3k0b_A 249 DARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERL 321 (393)
T ss_dssp HHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSH
T ss_pred HHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCcccc
Confidence 156999999999999999999999999899999999987521 3689999999872
Q ss_pred ---cchHHHHHHHHhcccC--CeEEEE
Q 022597 221 ---RMYQEYFELLLQLIRV--GGIIVI 242 (294)
Q Consensus 221 ---~~~~~~~~~~~~lLkp--gG~ivi 242 (294)
.....++..+.+.|++ ||.+.+
T Consensus 322 ~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 322 EDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred CCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 2334445544444444 665544
No 244
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.85 E-value=6.9e-09 Score=99.48 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-------------------------
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP------------------------- 157 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~------------------------- 157 (294)
+.+..+..|..+....+..++||.|||+ |..++.++....
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGS---------------Gt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~ 243 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGS---------------GTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWD 243 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTT---------------CHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCC---------------CHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHH
Confidence 3444555555555555677999999999 998888776532
Q ss_pred ------------CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----
Q 022597 158 ------------ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK----- 220 (294)
Q Consensus 158 ------------~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~----- 220 (294)
...+|+|+|+|+++++.|+++++.+|+.+.+++.++|+.+... .++||+|+.|++-
T Consensus 244 ~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~ 316 (385)
T 3ldu_A 244 VRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLE 316 (385)
T ss_dssp HHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHH
T ss_pred HHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccC
Confidence 1257999999999999999999999999899999999987532 4689999999872
Q ss_pred --cchHHHHHHHHhcccC--CeEEE
Q 022597 221 --RMYQEYFELLLQLIRV--GGIIV 241 (294)
Q Consensus 221 --~~~~~~~~~~~~lLkp--gG~iv 241 (294)
.....++..+.+.|++ ||.+.
T Consensus 317 ~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 317 DKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp HHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 2234455555445544 55544
No 245
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.84 E-value=1.3e-08 Score=97.62 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC------------------------
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE------------------------ 158 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~------------------------ 158 (294)
+.+..+..|..+....+...++|.+||+ |...+..+.....
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGS---------------Gt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~ 242 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGS---------------GTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTR 242 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTT---------------SHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHH
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcC---------------CHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHH
Confidence 4556666666666666778999999999 9888877764321
Q ss_pred -------------CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-----
Q 022597 159 -------------SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK----- 220 (294)
Q Consensus 159 -------------~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~----- 220 (294)
..+++++|+|+++++.|+++++.+|+.+++++.++|+.+... .++||+|+.|++-
T Consensus 243 ~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~ 315 (384)
T 3ldg_A 243 VRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLL 315 (384)
T ss_dssp HHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTS
T ss_pred HHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccC
Confidence 156999999999999999999999999999999999987521 3589999999872
Q ss_pred --cchHHHHHHHHhcccC--CeEEEE
Q 022597 221 --RMYQEYFELLLQLIRV--GGIIVI 242 (294)
Q Consensus 221 --~~~~~~~~~~~~lLkp--gG~ivi 242 (294)
.....++..+.+.|++ ||.+.+
T Consensus 316 ~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 316 DDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred CHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 2344555555555554 665543
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.84 E-value=9.7e-09 Score=86.92 Aligned_cols=100 Identities=10% Similarity=0.090 Sum_probs=71.7
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCC--------cEEEEEeCChHHHHHHHHHHHHhCCCCcEE
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPES--------GCLVACERDARSLEVAKKYYERAGVSHKVK 189 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~--------~~v~~id~~~~~~~~A~~~~~~~gl~~~v~ 189 (294)
.++.+|||+|||+ |..+..++...+.. ++|+++|+++.. +. .+++
T Consensus 21 ~~~~~vLDlGcG~---------------G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~ 73 (196)
T 2nyu_A 21 RPGLRVLDCGAAP---------------GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGAT 73 (196)
T ss_dssp CTTCEEEEETCCS---------------CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCE
T ss_pred CCCCEEEEeCCCC---------------CHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCe
Confidence 3467999999999 99999999987643 899999999941 22 3588
Q ss_pred EE-EcchhhhHH--HHhhcCCCCceeEEEEcCCcc-------c-------hHHHHHHHHhcccCCeEEEEec
Q 022597 190 IK-HGLAADSLK--ALILNGEASSYDFAFVDAEKR-------M-------YQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 190 ~~-~gda~~~l~--~l~~~~~~~~fD~vfiD~~~~-------~-------~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++ .+|..+... .+....+.++||+|+.+.... + ....++.+.+.|+|||.+++..
T Consensus 74 ~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 74 FLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp EECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 88 888754321 111111135899999875211 1 1477888999999999999864
No 247
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.84 E-value=2e-08 Score=93.48 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=71.3
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++.+|||+|||+ |..+..++...+ +++|+++|.|+++++.|+++++..| ++++++++|+
T Consensus 23 ~~~~g~~vLD~g~G~---------------G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~ 84 (301)
T 1m6y_A 23 KPEDEKIILDCTVGE---------------GGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSY 84 (301)
T ss_dssp CCCTTCEEEETTCTT---------------SHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCG
T ss_pred CCCCCCEEEEEeCCc---------------CHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCH
Confidence 344567999999999 999999999887 7899999999999999999999887 5899999998
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCcc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKR 221 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~ 221 (294)
.+....+...+ ..+||.|++|.+..
T Consensus 85 ~~l~~~l~~~g-~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 85 READFLLKTLG-IEKVDGILMDLGVS 109 (301)
T ss_dssp GGHHHHHHHTT-CSCEEEEEEECSCC
T ss_pred HHHHHHHHhcC-CCCCCEEEEcCccc
Confidence 76533232111 25899999998744
No 248
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.83 E-value=1.1e-08 Score=94.11 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=75.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcH----HHHHHHHHCCC---CcEEEEEeCChHHHHHHHHHHH-----------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGY----SSLAIALVLPE---SGCLVACERDARSLEVAKKYYE----------- 180 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~----~sl~la~~~~~---~~~v~~id~~~~~~~~A~~~~~----------- 180 (294)
++.+|+|+|||| |. .++.++...+. +.+|+|+|+|+++++.|++..-
T Consensus 105 ~~~rIld~GCgT---------------Gee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~ 169 (274)
T 1af7_A 105 GEYRVWSAAAST---------------GEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQ 169 (274)
T ss_dssp SCEEEEESCCTT---------------THHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHH
T ss_pred CCcEEEEeeccC---------------ChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHH
Confidence 346999999999 97 44555555442 3599999999999999998641
Q ss_pred ---H---------hC-------CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccC
Q 022597 181 ---R---------AG-------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRV 236 (294)
Q Consensus 181 ---~---------~g-------l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkp 236 (294)
+ .| +.++|+|.++|..+. + +. ..++||+||+-.- .+...+.++.+.+.|+|
T Consensus 170 ~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~-~-~~---~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p 244 (274)
T 1af7_A 170 QLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK-Q-YN---VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP 244 (274)
T ss_dssp HHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS-S-CC---CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHhhccccCCCCceeechhhcccCeEEecccCCC-C-CC---cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC
Confidence 0 01 113699999998752 0 10 0368999998532 34457889999999999
Q ss_pred CeEEEEe
Q 022597 237 GGIIVID 243 (294)
Q Consensus 237 gG~ivid 243 (294)
||++++.
T Consensus 245 gG~L~lg 251 (274)
T 1af7_A 245 DGLLFAG 251 (274)
T ss_dssp EEEEEEC
T ss_pred CcEEEEE
Confidence 9999984
No 249
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.82 E-value=4.6e-08 Score=93.29 Aligned_cols=120 Identities=13% Similarity=0.090 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 106 DQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 106 ~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
...++...++...++.+|||+++|. |.-|+.++.... ++.|+++|+++..++..++++++.|..
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaP---------------GGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~ 198 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAP---------------GGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPE 198 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTT---------------CHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCc---------------cHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhh
Confidence 4456667777778888999999999 988999988654 678999999999999999999998864
Q ss_pred -----CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc---------------------------hHHHHHHHHhc
Q 022597 186 -----HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM---------------------------YQEYFELLLQL 233 (294)
Q Consensus 186 -----~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~---------------------------~~~~~~~~~~l 233 (294)
.++.+...|+....+.. .++||.|++|++-.. ..++++.+.++
T Consensus 199 ~~~~~~~v~v~~~D~~~~~~~~-----~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~ 273 (359)
T 4fzv_A 199 EIRDGNQVRVTSWDGRKWGELE-----GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLA 273 (359)
T ss_dssp TTTTSSSEEEECCCGGGHHHHS-----TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHT
T ss_pred hhccCCceEEEeCchhhcchhc-----cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhc
Confidence 47899999987654432 578999999976110 24677788899
Q ss_pred ccCCeEEEEeccc
Q 022597 234 IRVGGIIVIDNVL 246 (294)
Q Consensus 234 LkpgG~ivid~vl 246 (294)
|||||+||....-
T Consensus 274 lkpGG~LVYsTCS 286 (359)
T 4fzv_A 274 TKPGGHVVYSTCS 286 (359)
T ss_dssp EEEEEEEEEEESC
T ss_pred CCCCcEEEEEeCC
Confidence 9999999988774
No 250
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.81 E-value=1.4e-08 Score=93.37 Aligned_cols=156 Identities=8% Similarity=0.059 Sum_probs=102.1
Q ss_pred HHHHHHHHhh-hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC
Q 022597 108 AQLLAMLVQI-LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH 186 (294)
Q Consensus 108 ~~lL~~l~~~-~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~ 186 (294)
..+...+... ..+.+|||||||+ |-.++.++... +..+++++|+|+.+++.+++++..+|+.
T Consensus 120 D~fY~~i~~~i~~p~~VLDLGCG~---------------GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~- 182 (281)
T 3lcv_B 120 DEFYRELFRHLPRPNTLRDLACGL---------------NPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP- 182 (281)
T ss_dssp HHHHHHHGGGSCCCSEEEETTCTT---------------GGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHhccCCCceeeeeccCc---------------cHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC-
Confidence 3333333333 4578999999999 88888877754 4899999999999999999999999986
Q ss_pred cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcch
Q 022597 187 KVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKT 261 (294)
Q Consensus 187 ~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~ 261 (294)
.++.+.|..... ..++||++++.-- ...-...| .+.+.|+++|++|--++ ..+.++. ....
T Consensus 183 -~~~~v~D~~~~~-------p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~---ksl~Grs--~gm~ 248 (281)
T 3lcv_B 183 -HRTNVADLLEDR-------LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT---KSLGQRS--KGMF 248 (281)
T ss_dssp -EEEEECCTTTSC-------CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC---C---------CHH
T ss_pred -ceEEEeeecccC-------CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc---hhhcCCC--cchh
Confidence 677888876432 2689999987533 12222445 68899999999997766 1122111 1111
Q ss_pred HHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 022597 262 ISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 262 ~~ir~f~~~l~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
....+.++....+.+....-+-+++-+....+|
T Consensus 249 ~~Y~~~~e~~~~~~g~~~~~~~~~nEl~y~i~k 281 (281)
T 3lcv_B 249 QNYSQSFESQARERSCRIQRLEIGNELIYVIQK 281 (281)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEEC-
T ss_pred hHHHHHHHHHHHhcCCceeeeeecCeeEEEecC
Confidence 122233333333344466677778887776654
No 251
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.79 E-value=8.8e-09 Score=99.89 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=67.6
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--CCCCcEEEEEcchhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GVSHKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--gl~~~v~~~~gda~~ 197 (294)
+.+|||+|||+ |..++.++.. +.+|+++|+|+++++.|+++++.+ |+ ++++++++|+.+
T Consensus 94 g~~VLDLgcG~---------------G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~ 154 (410)
T 3ll7_A 94 GTKVVDLTGGL---------------GIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKE 154 (410)
T ss_dssp TCEEEESSCSS---------------SHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGG
T ss_pred CCEEEEeCCCc---------------hHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHH
Confidence 68999999999 9999988875 579999999999999999999998 88 689999999998
Q ss_pred hHHHHhhcCCCCceeEEEEcCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~ 219 (294)
.++.+. .++||+||+|++
T Consensus 155 ~L~~~~----~~~fDvV~lDPP 172 (410)
T 3ll7_A 155 YLPLIK----TFHPDYIYVDPA 172 (410)
T ss_dssp SHHHHH----HHCCSEEEECCE
T ss_pred hhhhcc----CCCceEEEECCC
Confidence 766531 258999999975
No 252
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.79 E-value=2e-09 Score=98.31 Aligned_cols=86 Identities=15% Similarity=0.216 Sum_probs=68.7
Q ss_pred HHHHHhhhCC--CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC-----
Q 022597 111 LAMLVQILGA--QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG----- 183 (294)
Q Consensus 111 L~~l~~~~~~--~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g----- 183 (294)
+...+...++ .+|||+|||+ |..++.++.. +++|+++|.++...+.+++++++++
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~---------------G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~ 139 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGL---------------GRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEI 139 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTT---------------CHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHhcccCCCCCEEEEcCCcC---------------CHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhh
Confidence 3334444455 7999999999 9999999986 5689999999999888888877553
Q ss_pred ---CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC
Q 022597 184 ---VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 184 ---l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~ 219 (294)
+.++++++++|+.+.++.+ .++||+||+|+.
T Consensus 140 ~~~l~~~i~~~~~D~~~~L~~~-----~~~fDvV~lDP~ 173 (258)
T 2oyr_A 140 GGWLQERLQLIHASSLTALTDI-----TPRPQVVYLDPM 173 (258)
T ss_dssp HHHHHHHEEEEESCHHHHSTTC-----SSCCSEEEECCC
T ss_pred hhhhhcCEEEEECCHHHHHHhC-----cccCCEEEEcCC
Confidence 3357999999998876544 357999999985
No 253
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.78 E-value=9.4e-10 Score=98.35 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=65.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc-chhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g-da~~ 197 (294)
++++|||||||| |..+..+++. + ..+|+++|+++++++.|+++.. ++..... +...
T Consensus 37 ~g~~VLDiGcGt---------------G~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~ 93 (232)
T 3opn_A 37 NGKTCLDIGSST---------------GGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRN 93 (232)
T ss_dssp TTCEEEEETCTT---------------SHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGG
T ss_pred CCCEEEEEccCC---------------CHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEE
Confidence 456999999999 9999999886 2 3599999999999998766432 2322211 2211
Q ss_pred hH-HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 198 SL-KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~l-~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.. ..+ +...||.+..|........+++.+.+.|+|||.+++
T Consensus 94 ~~~~~~----~~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 94 AVLADF----EQGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CCGGGC----CSCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred eCHhHc----CcCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEE
Confidence 10 001 012356665555444457889999999999999988
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.76 E-value=2.9e-08 Score=93.93 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=77.7
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+..+|||||||+ |..+..+++..| +.+++++|+ +++++.|++ .++++++.+|..+
T Consensus 202 ~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~ 257 (368)
T 3reo_A 202 EGLTTIVDVGGGT---------------GAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFD 257 (368)
T ss_dssp TTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT
T ss_pred cCCCEEEEeCCCc---------------CHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCC
Confidence 3457999999999 999999999986 789999999 888776653 2579999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
. + ... |+|++..- .+....+++.+.+.|+|||.+++.+..++.
T Consensus 258 ~---~-----p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 258 G---V-----PKG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp C---C-----CCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred C---C-----CCC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 2 1 223 99987532 334568899999999999999887776543
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.75 E-value=1.8e-08 Score=97.89 Aligned_cols=120 Identities=9% Similarity=0.075 Sum_probs=94.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC------------CCcEEEEEeCC
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP------------ESGCLVACERD 168 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~------------~~~~v~~id~~ 168 (294)
.-.++...+++..++....+.+|+|.|||+ |...+.++..+. ...+++|+|++
T Consensus 153 fyTP~~v~~~mv~~l~~~~~~~VlDpacGs---------------G~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~ 217 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINPQMGETVCDPACGT---------------GGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNT 217 (445)
T ss_dssp GCCCHHHHHHHHHHHCCCTTCCEEETTCTT---------------CHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESC
T ss_pred ccCcHHHHHHHHHHhCCCCCCEEeccCCCc---------------chHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCC
Confidence 345667778888877766778999999999 988888877642 13679999999
Q ss_pred hHHHHHHHHHHHHhCCCC-cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc--------------------hHHHH
Q 022597 169 ARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------YQEYF 227 (294)
Q Consensus 169 ~~~~~~A~~~~~~~gl~~-~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~--------------------~~~~~ 227 (294)
+.+++.|+.++...|+.. .+++.++|+..... .++||+|+.+++-.. ...++
T Consensus 218 ~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~-------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl 290 (445)
T 2okc_A 218 PLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP-------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFL 290 (445)
T ss_dssp HHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC-------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc-------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHH
Confidence 999999999999888863 57899999875311 358999999875110 24789
Q ss_pred HHHHhcccCCeEEEE
Q 022597 228 ELLLQLIRVGGIIVI 242 (294)
Q Consensus 228 ~~~~~lLkpgG~ivi 242 (294)
+.+.++|+|||.+++
T Consensus 291 ~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 291 QHMMLMLKTGGRAAV 305 (445)
T ss_dssp HHHHHHEEEEEEEEE
T ss_pred HHHHHHhccCCEEEE
Confidence 999999999998764
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.74 E-value=3.8e-08 Score=93.05 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=78.1
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+..+|||||||+ |..+..+++..| +.+++++|+ +++++.|++ .++++++.+|+.+
T Consensus 200 ~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~ 255 (364)
T 3p9c_A 200 EGLGTLVDVGGGV---------------GATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFK 255 (364)
T ss_dssp TTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT
T ss_pred cCCCEEEEeCCCC---------------CHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCC
Confidence 3467999999999 999999999987 778999999 888776653 2579999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
. + ... |+|++..- .+....+++.+.+.|+|||.+++.+..++.
T Consensus 256 ~---~-----p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 256 E---V-----PSG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp C---C-----CCC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred C---C-----CCC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 2 1 223 99987432 344568899999999999999887776543
No 257
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=6e-08 Score=90.05 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=75.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
..+++...+.+...+...++.+|||||||+ |+.+..++.. +.+|+++|+|+++++.++++++
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~---------------G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGK---------------GILTEELAKN---AKKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTT---------------SHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCc---------------hHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc
Confidence 456777766666666667778999999999 9999999987 4799999999999999999987
Q ss_pred HhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc
Q 022597 181 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR 221 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~ 221 (294)
. .++++++++|+.+.. + +..+||.|+.+.+-.
T Consensus 94 ~---~~~v~vi~gD~l~~~--~----~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 94 L---YNNIEIIWGDALKVD--L----NKLDFNKVVANLPYQ 125 (295)
T ss_dssp H---CSSEEEEESCTTTSC--G----GGSCCSEEEEECCGG
T ss_pred c---CCCeEEEECchhhCC--c----ccCCccEEEEeCccc
Confidence 3 247999999997641 1 134699999887643
No 258
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.72 E-value=1e-08 Score=88.40 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=72.4
Q ss_pred HHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 108 AQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 108 ~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
..++..+....++.+|||+|||+ |..+..++ .+++++|+++. +
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~---------------G~~~~~l~------~~v~~~D~s~~----------------~ 98 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGD---------------CRLASSIR------NPVHCFDLASL----------------D 98 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTT---------------CHHHHHCC------SCEEEEESSCS----------------S
T ss_pred HHHHHHHhccCCCCeEEEECCcC---------------CHHHHHhh------ccEEEEeCCCC----------------C
Confidence 34555555555668999999999 98776652 68999999998 3
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++..+|+.+.. .+.++||+|+.... ..+...+++.+.++|+|||.+++.+.
T Consensus 99 ~~~~~~d~~~~~------~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 99 PRVTVCDMAQVP------LEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp TTEEESCTTSCS------CCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEEeccccCC------CCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 677888886531 12478999987543 35678999999999999999998754
No 259
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.72 E-value=2e-09 Score=99.99 Aligned_cols=99 Identities=14% Similarity=0.057 Sum_probs=71.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEE-Ecchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~-~gda~~ 197 (294)
.+++|||+|||| |..+..+++. ..++|+++|+++++++.+.+. ..++... ..++..
T Consensus 85 ~g~~vLDiGcGT---------------G~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 85 EDMITIDIGAST---------------GGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRY 141 (291)
T ss_dssp TTCEEEEETCTT---------------SHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGG
T ss_pred cccEEEecCCCc---------------cHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh------CcccceecccCcee
Confidence 345999999999 9999988875 246999999999999875332 1244433 234432
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.... ..+..+||+|++|.........+..+.++|+|||.+++-
T Consensus 142 l~~~---~l~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 142 AEPV---DFTEGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCGG---GCTTCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred cchh---hCCCCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 2111 011345999999987666788999999999999999873
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=6.7e-08 Score=87.77 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=74.9
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 100 ~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
...+++...+.+...+...++.+|||||||+ |..+..++.. +++|+++|+|+++++.+++++
T Consensus 10 nFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~---------------G~lt~~La~~---~~~V~avEid~~~~~~~~~~~ 71 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAIHPQKTDTLVEIGPGR---------------GALTDYLLTE---CDNLALVEIDRDLVAFLQKKY 71 (255)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTT---------------TTTHHHHTTT---SSEEEEEECCHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHhcCCCCcCEEEEEcccc---------------cHHHHHHHHh---CCEEEEEECCHHHHHHHHHHH
Confidence 3457787777777777777888999999999 9999999875 479999999999999999988
Q ss_pred HHhCCCCcEEEEEcchhhh-HHHHhhcCCCCceeEEEEcCC
Q 022597 180 ERAGVSHKVKIKHGLAADS-LKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 180 ~~~gl~~~v~~~~gda~~~-l~~l~~~~~~~~fD~vfiD~~ 219 (294)
+. .++++++++|+.+. ++.+. ..++|| |+.+.+
T Consensus 72 ~~---~~~v~~i~~D~~~~~~~~~~---~~~~~~-vv~NlP 105 (255)
T 3tqs_A 72 NQ---QKNITIYQNDALQFDFSSVK---TDKPLR-VVGNLP 105 (255)
T ss_dssp TT---CTTEEEEESCTTTCCGGGSC---CSSCEE-EEEECC
T ss_pred hh---CCCcEEEEcchHhCCHHHhc---cCCCeE-EEecCC
Confidence 65 35799999999875 22211 135788 777765
No 261
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.67 E-value=2.7e-07 Score=83.90 Aligned_cols=142 Identities=12% Similarity=0.039 Sum_probs=92.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+.+|||||||+ |-.++.+. ++.+++++|+|+.+++.+++++...|. +.++..+|...
T Consensus 104 ~~p~~VLDlGCG~---------------gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~ 162 (253)
T 3frh_A 104 ETPRRVLDIACGL---------------NPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLC 162 (253)
T ss_dssp CCCSEEEEETCTT---------------THHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTT
T ss_pred CCCCeEEEecCCc---------------cHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeccc
Confidence 4678999999999 88777766 478999999999999999999998884 57888888865
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCCcchHHHH-HHHHHh
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIR-NFNKNL 271 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~~~~~~ir-~f~~~l 271 (294)
... .++||+|++--- ...-...+ .+.+.|+++|++|--.+ ..+.++.. ....... .|.+.+
T Consensus 163 ~~~-------~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPt---ksl~Gr~~--gm~~~Y~~~~e~~~ 229 (253)
T 3frh_A 163 APP-------AEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPT---RSLGGRGK--GMEANYAAWFEGGL 229 (253)
T ss_dssp SCC-------CCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEEC---C-------------CHHHHHHHHS
T ss_pred CCC-------CCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcCh---HHhcCCCc--chhhHHHHHHHHHh
Confidence 422 579999976521 11222333 66679999999987663 22222110 0001112 233333
Q ss_pred hhCCCeEEEEeecCCceEEEEEC
Q 022597 272 MEDERVSISMVPIGDGMTICQKR 294 (294)
Q Consensus 272 ~~~~~~~~~~lp~gdGl~i~~k~ 294 (294)
......+--.-+|+-+....+|
T Consensus 230 -~~~~~~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 230 -PAEFEIEDKKTIGTELIYLIKK 251 (253)
T ss_dssp -CTTEEEEEEEEETTEEEEEEEE
T ss_pred -hccchhhhheecCceEEEEEec
Confidence 4444555666777777666553
No 262
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.65 E-value=6.5e-08 Score=92.85 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=101.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh--C-C----CCcEEEE
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--G-V----SHKVKIK 191 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~--g-l----~~~v~~~ 191 (294)
++++||-||.|. |.....+++. + ..+|+.||+|++.++.+++++... + . .++++++
T Consensus 205 ~pkrVLIIGgGd---------------G~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vi 267 (381)
T 3c6k_A 205 TGKDVLILGGGD---------------GGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL 267 (381)
T ss_dssp TTCEEEEEECTT---------------CHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE
T ss_pred CCCeEEEECCCc---------------HHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeee
Confidence 467999999999 8888877764 4 479999999999999999987431 1 1 2469999
Q ss_pred EcchhhhHHHHhhcCCCCceeEEEEcCCc-------------cchHHHHHHHHhcccCCeEEEEecccCCCcccCcccCC
Q 022597 192 HGLAADSLKALILNGEASSYDFAFVDAEK-------------RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVND 258 (294)
Q Consensus 192 ~gda~~~l~~l~~~~~~~~fD~vfiD~~~-------------~~~~~~~~~~~~lLkpgG~ivid~vl~~g~v~~~~~~~ 258 (294)
.+|+.+.++..... .++||+|++|... ....++++.+.+.|+|||+++...- . +..
T Consensus 268 i~Da~~fl~~~~~~--~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~----s---~~~-- 336 (381)
T 3c6k_A 268 IEDCIPVLKRYAKE--GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN----C---VNL-- 336 (381)
T ss_dssp ESCHHHHHHHHHHH--TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE----E---TTC--
T ss_pred hHHHHHHHHhhhhc--cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC----C---Ccc--
Confidence 99999998765432 4689999999521 1246889999999999999987521 1 110
Q ss_pred cchHHHHHHHHHhhhC-CCeEE----EEeec---CCceEEEEEC
Q 022597 259 AKTISIRNFNKNLMED-ERVSI----SMVPI---GDGMTICQKR 294 (294)
Q Consensus 259 ~~~~~ir~f~~~l~~~-~~~~~----~~lp~---gdGl~i~~k~ 294 (294)
...+..+.+.+..- +.+.. +.+|. ..|..+|-|+
T Consensus 337 --~~~~~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 337 --TEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp --HHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred --hhHHHHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 12345555555442 34432 34565 3577777764
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.62 E-value=1.5e-07 Score=94.03 Aligned_cols=122 Identities=7% Similarity=-0.021 Sum_probs=94.2
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-----------------CcEEE
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-----------------SGCLV 163 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-----------------~~~v~ 163 (294)
.-.++...++|..++....+.+|+|.+||+ |...+.++..+.. ..+++
T Consensus 151 fyTP~~iv~~mv~~l~p~~~~~VlDPaCGS---------------G~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 215 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKPQPREVVQDPAAGT---------------AGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFI 215 (541)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTT---------------THHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEE
T ss_pred eeCCHHHHHHHHHHhccCCCCeEecCCccc---------------chHHHHHHHHHHHhhcccccCCHHHHhhhhcceEE
Confidence 345666778877777766677999999999 9888887776532 13799
Q ss_pred EEeCChHHHHHHHHHHHHhCCCC----cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-----------------c
Q 022597 164 ACERDARSLEVAKKYYERAGVSH----KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----------------M 222 (294)
Q Consensus 164 ~id~~~~~~~~A~~~~~~~gl~~----~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-----------------~ 222 (294)
|+|+++.+++.|+.++...|+.. ++.+.++|+......- .++||+|+.+++-. .
T Consensus 216 GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~-----~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~ 290 (541)
T 2ar0_A 216 GLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGEN-----LPKAHIVATNPPFGSAAGTNITRTFVHPTSNK 290 (541)
T ss_dssp EEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHT-----SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCH
T ss_pred EEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCccccccc-----ccCCeEEEECCCcccccchhhHhhcCCCCCch
Confidence 99999999999999999888764 3789999987643221 46899999987611 1
Q ss_pred hHHHHHHHHhcccCCeEEEE
Q 022597 223 YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 223 ~~~~~~~~~~lLkpgG~ivi 242 (294)
+..+++.+.++|+|||.+++
T Consensus 291 ~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 291 QLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEE
Confidence 34789999999999998664
No 264
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.62 E-value=4.5e-08 Score=92.31 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=77.6
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..++...+ +.+++++|+ +++++.|++ . .+++++.+|+.+
T Consensus 208 ~~~~~vLDvG~G~---------------G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~ 263 (372)
T 1fp1_D 208 EGISTLVDVGGGS---------------GRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA 263 (372)
T ss_dssp TTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT
T ss_pred CCCCEEEEeCCCC---------------cHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc
Confidence 3467999999999 999999999886 678999999 988877764 1 469999999875
Q ss_pred hHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEecccCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWH 248 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~vl~~ 248 (294)
. + .. ||+|++... ......+++.+.+.|+|||.+++.+..++
T Consensus 264 ~---~-----~~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 264 S---V-----PQ-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp C---C-----CC-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred C---C-----CC-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 2 1 23 999987543 22234899999999999999998776543
No 265
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.61 E-value=7.4e-08 Score=90.04 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=78.1
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..+..+|||||||+ |..+..++...| +.+++++|+ +++++.|++ . .+++++.+|..
T Consensus 186 ~~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~ 241 (352)
T 1fp2_A 186 FDGLESIVDVGGGT---------------GTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMF 241 (352)
T ss_dssp HTTCSEEEEETCTT---------------SHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTT
T ss_pred cccCceEEEeCCCc---------------cHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEecccc
Confidence 34567999999999 999999999886 679999999 998887765 1 35999999986
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccC---CeEEEEecccCC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRV---GGIIVIDNVLWH 248 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkp---gG~ivid~vl~~ 248 (294)
+. + ..||+|++... ......+++.+.+.|+| ||.+++.+..++
T Consensus 242 ~~---~------p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 242 TS---I------PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp TC---C------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred CC---C------CCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 52 1 24999987532 22334899999999999 999988776544
No 266
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.58 E-value=1.3e-07 Score=94.74 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=65.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++.+|||||||+ |..+..||+. ++.|||||.+++++++|+...++.|.. ++++.++++.+
T Consensus 65 ~~~~~vLDvGCG~---------------G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~ 125 (569)
T 4azs_A 65 GRPLNVLDLGCAQ---------------GFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEE 125 (569)
T ss_dssp TSCCEEEEETCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHH
T ss_pred CCCCeEEEECCCC---------------cHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHH
Confidence 3567999999999 9999999985 689999999999999999999987754 59999999988
Q ss_pred hHHHHhhcCCCCceeEEEEcC
Q 022597 198 SLKALILNGEASSYDFAFVDA 218 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~ 218 (294)
..... +.++||+|+.-.
T Consensus 126 ~~~~~----~~~~fD~v~~~e 142 (569)
T 4azs_A 126 VIAAL----EEGEFDLAIGLS 142 (569)
T ss_dssp HHHHC----CTTSCSEEEEES
T ss_pred Hhhhc----cCCCccEEEECc
Confidence 76543 257899997643
No 267
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.57 E-value=7.2e-08 Score=89.37 Aligned_cols=88 Identities=20% Similarity=0.250 Sum_probs=66.5
Q ss_pred CCCeEEEEcc------ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEE-E
Q 022597 119 GAQRCIEVGV------YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI-K 191 (294)
Q Consensus 119 ~~~~vLEiG~------g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~-~ 191 (294)
++.+|||+|| |+ |. ..+++..+++++|+++|++++ + +++++ +
T Consensus 63 ~g~~VLDLGcGsg~~~Gp---------------Gs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i 111 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAP---------------GT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTL 111 (290)
T ss_dssp TTCEEEEESCCCTTSBCH---------------HH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEE
T ss_pred CCCEEEEeCCCCCCCCCc---------------HH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEE
Confidence 4569999999 44 54 445666766799999999998 1 25888 9
Q ss_pred EcchhhhHHHHhhcCCCCceeEEEEcCCc--------------cchHHHHHHHHhcccCCeEEEEec
Q 022597 192 HGLAADSLKALILNGEASSYDFAFVDAEK--------------RMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 192 ~gda~~~l~~l~~~~~~~~fD~vfiD~~~--------------~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++|+.+.. + .++||+|+.|... ..+...++.+.+.|+|||.+++..
T Consensus 112 ~gD~~~~~--~-----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 112 IGDCATVH--T-----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ESCGGGCC--C-----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECccccCC--c-----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99997631 1 3689999997431 124578899999999999999864
No 268
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.55 E-value=2.6e-07 Score=82.72 Aligned_cols=77 Identities=10% Similarity=0.082 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
..+++...+.+...+...++.+|||||||+ |..+..++... ++|+++|+|+++++.++++++
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~---------------G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGK---------------GHFTLELVQRC---NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTT---------------SHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCc---------------hHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhc
Confidence 345666555555545555677999999999 99999999873 799999999999999999876
Q ss_pred HhCCCCcEEEEEcchhhh
Q 022597 181 RAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~ 198 (294)
. .++++++++|+.+.
T Consensus 74 ~---~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 74 D---HDNFQVLNKDILQF 88 (244)
T ss_dssp T---CCSEEEECCCGGGC
T ss_pred c---CCCeEEEEChHHhC
Confidence 4 25799999999764
No 269
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.52 E-value=2.4e-07 Score=84.99 Aligned_cols=94 Identities=15% Similarity=0.043 Sum_probs=74.5
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHH
Q 022597 99 SQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKY 178 (294)
Q Consensus 99 ~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~ 178 (294)
....+++...+-+...+...++ +|||||||+ |..+..++.. +++|+++|+|+++++.++++
T Consensus 27 QnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~---------------G~lt~~L~~~---~~~V~avEid~~~~~~l~~~ 87 (271)
T 3fut_A 27 QNFLVSEAHLRRIVEAARPFTG-PVFEVGPGL---------------GALTRALLEA---GAEVTAIEKDLRLRPVLEET 87 (271)
T ss_dssp CCEECCHHHHHHHHHHHCCCCS-CEEEECCTT---------------SHHHHHHHHT---TCCEEEEESCGGGHHHHHHH
T ss_pred ccccCCHHHHHHHHHhcCCCCC-eEEEEeCch---------------HHHHHHHHHc---CCEEEEEECCHHHHHHHHHh
Confidence 3456788877777777777777 999999999 9999999986 37899999999999999988
Q ss_pred HHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc
Q 022597 179 YERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK 220 (294)
Q Consensus 179 ~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~ 220 (294)
+. ..+++++++|+.+.-..- ...+|.|+.+.+-
T Consensus 88 ~~----~~~v~vi~~D~l~~~~~~-----~~~~~~iv~NlPy 120 (271)
T 3fut_A 88 LS----GLPVRLVFQDALLYPWEE-----VPQGSLLVANLPY 120 (271)
T ss_dssp TT----TSSEEEEESCGGGSCGGG-----SCTTEEEEEEECS
T ss_pred cC----CCCEEEEECChhhCChhh-----ccCccEEEecCcc
Confidence 75 257999999997652110 1368999988763
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.52 E-value=2e-07 Score=95.85 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=87.6
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHC---C----------------------
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL---P---------------------- 157 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~---~---------------------- 157 (294)
+.+..+..|..++...+...++|.+||+ |...+..+... +
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CGS---------------Gt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~ 238 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCGS---------------GTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 238 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCTT---------------SHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCCC---------------cHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHH
Confidence 5556666666666656677999999999 98888776642 1
Q ss_pred ----------------CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc-
Q 022597 158 ----------------ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK- 220 (294)
Q Consensus 158 ----------------~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~- 220 (294)
...+++|+|+|+++++.|++|++.+|+.+.+++.++|+.+.... ...++||+|+.+++-
T Consensus 239 ~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~----~~~~~~d~Iv~NPPYG 314 (703)
T 3v97_A 239 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP----LPKGPYGTVLSNPPYG 314 (703)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS----CTTCCCCEEEECCCCC
T ss_pred HHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc----cccCCCCEEEeCCCcc
Confidence 12589999999999999999999999999999999999874211 012389999999872
Q ss_pred ------cchHHHHHHH---HhcccCCeEEEE
Q 022597 221 ------RMYQEYFELL---LQLIRVGGIIVI 242 (294)
Q Consensus 221 ------~~~~~~~~~~---~~lLkpgG~ivi 242 (294)
....++++.+ ++.+.|||.+.+
T Consensus 315 ~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 315 ERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp C---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 1233444444 344457887665
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.50 E-value=2.3e-07 Score=94.45 Aligned_cols=101 Identities=12% Similarity=0.075 Sum_probs=77.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHC---CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL---PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~---~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..|+|||||+ |-.+...+++. ....+|++||.|+ +...|++..+.+|+.++|++++||.++
T Consensus 359 ~vVldVGaGr---------------GpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~ee 422 (637)
T 4gqb_A 359 QVLMVLGAGR---------------GPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMRE 422 (637)
T ss_dssp EEEEEESCTT---------------SHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTT
T ss_pred cEEEEECCCC---------------cHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCccee
Confidence 4799999999 98855444443 2234799999998 677899999999999999999999988
Q ss_pred hHHHHhhcCCCCceeEEEEcC---C--ccchHHHHHHHHhcccCCeEEEEec
Q 022597 198 SLKALILNGEASSYDFAFVDA---E--KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~---~--~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+- + .++.|+|+..- . .+...+.+....+.|||||+++=+.
T Consensus 423 v~--L-----PEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiPs~ 467 (637)
T 4gqb_A 423 WV--A-----PEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGE 467 (637)
T ss_dssp CC--C-----SSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEESCE
T ss_pred cc--C-----CcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcccc
Confidence 62 1 57999998542 1 3345577777788999999987443
No 272
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.50 E-value=1.9e-07 Score=86.36 Aligned_cols=96 Identities=23% Similarity=0.283 Sum_probs=71.4
Q ss_pred ccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-
Q 022597 141 LSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE- 219 (294)
Q Consensus 141 ~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~- 219 (294)
+|+|||..++.+.. ++.+.+++.||.+++.++..+++++. .++++++.+|+...++.+... ..+||+||+|++
T Consensus 96 LDlfaGSGaLgiEa-LS~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~--~~~fdLVfiDPPY 169 (283)
T 2oo3_A 96 LSYYPGSPYFAINQ-LRSQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPP--PEKRGLIFIDPSY 169 (283)
T ss_dssp CCEEECHHHHHHHH-SCTTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSC--TTSCEEEEECCCC
T ss_pred eeEeCCcHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCC--CCCccEEEECCCC
Confidence 33444444444443 33468999999999999999999875 468999999998888776432 357999999997
Q ss_pred --ccchHHHHHHHHh--cccCCeEEEE
Q 022597 220 --KRMYQEYFELLLQ--LIRVGGIIVI 242 (294)
Q Consensus 220 --~~~~~~~~~~~~~--lLkpgG~ivi 242 (294)
+..|.+.++.+.+ .+.++|++++
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 3468888877764 6778998863
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.48 E-value=7.2e-07 Score=81.99 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=72.6
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHH
Q 022597 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKY 178 (294)
Q Consensus 100 ~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~ 178 (294)
...+++...+.+...+...++.+|||||||+ |..+..++...+. +++|+++|+|+++++.++++
T Consensus 23 ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~---------------G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 23 NFLVDHGVIDAIVAAIRPERGERMVEIGPGL---------------GALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTT---------------STTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCCCCcCEEEEEcccc---------------HHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 4556777777777777777788999999999 9999999987653 35699999999999999998
Q ss_pred HHHhCCCCcEEEEEcchhhhH-HHHhhcCCCCceeEEEEcCC
Q 022597 179 YERAGVSHKVKIKHGLAADSL-KALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 179 ~~~~gl~~~v~~~~gda~~~l-~~l~~~~~~~~fD~vfiD~~ 219 (294)
. ..+++++++|+.+.- +.+...+ ....+.|+.+.+
T Consensus 88 ~-----~~~v~~i~~D~~~~~~~~~~~~~-~~~~~~vv~NlP 123 (279)
T 3uzu_A 88 F-----GELLELHAGDALTFDFGSIARPG-DEPSLRIIGNLP 123 (279)
T ss_dssp H-----GGGEEEEESCGGGCCGGGGSCSS-SSCCEEEEEECC
T ss_pred c-----CCCcEEEECChhcCChhHhcccc-cCCceEEEEccC
Confidence 3 357999999998752 2221000 013356776665
No 274
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.48 E-value=3.4e-07 Score=85.71 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=77.5
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..+..+|||||||+ |..+..+++..| +.+++++|+ +++++.|++ . .+++++.+|..
T Consensus 191 ~~~~~~vlDvG~G~---------------G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~ 246 (358)
T 1zg3_A 191 FEGLESLVDVGGGT---------------GGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMF 246 (358)
T ss_dssp HHTCSEEEEETCTT---------------SHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTT
T ss_pred ccCCCEEEEECCCc---------------CHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccC
Confidence 34678999999999 999999999986 679999999 788876654 2 35999999987
Q ss_pred hhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccC---CeEEEEecccCC
Q 022597 197 DSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRV---GGIIVIDNVLWH 248 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkp---gG~ivid~vl~~ 248 (294)
+. ..+||+|++... ......+++.+.+.|+| ||.+++.+...+
T Consensus 247 ~~---------~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 247 KS---------IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp TC---------CCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred CC---------CCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 51 135999987543 22245899999999999 998888666543
No 275
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.43 E-value=4.6e-09 Score=93.72 Aligned_cols=114 Identities=11% Similarity=0.144 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER 181 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~ 181 (294)
.+++...+.+...+...++.+|||+|||+ |..+..++.. +++|+++|+|+++++.|+++++
T Consensus 12 l~~~~~~~~i~~~~~~~~~~~VLDiG~G~---------------G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~- 72 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNLKETDTVYEIGTGK---------------GHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK- 72 (245)
T ss_dssp CCCTTTHHHHHHHCCCCSSEEEEECSCCC---------------SSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT-
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEEeCCC---------------CHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc-
Confidence 34454444444445555667999999999 9999999987 3799999999999999888765
Q ss_pred hCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc----ch----------HHHH----HHHHhcccCCeEEEE
Q 022597 182 AGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR----MY----------QEYF----ELLLQLIRVGGIIVI 242 (294)
Q Consensus 182 ~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~----~~----------~~~~----~~~~~lLkpgG~ivi 242 (294)
..++++++++|+.+.. + ...++| .|+.+.+-. .. ..++ +.+.++|+|||.+.+
T Consensus 73 --~~~~v~~~~~D~~~~~--~---~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 73 --LNTRVTLIHQDILQFQ--F---PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp --TCSEEEECCSCCTTTT--C---CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred --cCCceEEEECChhhcC--c---ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 2457999999997642 1 002578 667665411 11 1223 567788999988765
No 276
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.43 E-value=2.2e-08 Score=91.91 Aligned_cols=98 Identities=7% Similarity=-0.071 Sum_probs=67.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH-HHhCCCCcEEEE--Ecch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~-~~~gl~~~v~~~--~gda 195 (294)
++++|||+|||+ |..+..++.. ++|+++|+++ +...+++.. .......+++++ .+|+
T Consensus 82 ~g~~VLDlGcGt---------------G~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~ 141 (276)
T 2wa2_A 82 LKGTVVDLGCGR---------------GSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDV 141 (276)
T ss_dssp CCEEEEEESCTT---------------CHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCG
T ss_pred CCCEEEEeccCC---------------CHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcH
Confidence 467999999999 9998888875 6899999998 433222110 001111268888 8898
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC--ccc-----h--HHHHHHHHhcccCCe--EEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE--KRM-----Y--QEYFELLLQLIRVGG--IIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~--~~~-----~--~~~~~~~~~lLkpgG--~ivid~ 244 (294)
.+. +.++||+|+.|.. ... . ...++.+.+.|+||| .+++..
T Consensus 142 ~~l--------~~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 142 TKM--------EPFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp GGC--------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred hhC--------CCCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 763 1478999999854 101 1 136788889999999 988853
No 277
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.41 E-value=6.9e-08 Score=89.75 Aligned_cols=95 Identities=11% Similarity=0.040 Sum_probs=66.4
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeC----ChHHHHHHHHHHHHhCCCCcEEEEEc-
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACER----DARSLEVAKKYYERAGVSHKVKIKHG- 193 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~----~~~~~~~A~~~~~~~gl~~~v~~~~g- 193 (294)
++++|||+|||+ |..+..+++. ++|+++|+ ++.+++.+ ..+..+ .++++++.+
T Consensus 82 ~g~~VLDlGcG~---------------G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~-~~~v~~~~~~ 139 (305)
T 2p41_A 82 PEGKVVDLGCGR---------------GGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYG-WNLVRLQSGV 139 (305)
T ss_dssp CCEEEEEETCTT---------------SHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTT-GGGEEEECSC
T ss_pred CCCEEEEEcCCC---------------CHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcC-CCCeEEEecc
Confidence 457999999999 9999888875 57999999 55432111 011112 246999988
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCcc--c----hH---HHHHHHHhcccCCeEEEEe
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKR--M----YQ---EYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~--~----~~---~~~~~~~~lLkpgG~ivid 243 (294)
|+.+. +.++||+|+.|.... . .. ..++.+.+.|+|||.+++.
T Consensus 140 D~~~l--------~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 140 DVFFI--------PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CTTTS--------CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ccccC--------CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 87643 146899999986421 1 11 4677778999999999985
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.40 E-value=1e-06 Score=90.33 Aligned_cols=108 Identities=10% Similarity=-0.041 Sum_probs=77.1
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC------------CCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP------------ESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~------------~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
.+.|+|||||+ |..+...+.+.. ...+|++||.|+......+... .+|+.++
T Consensus 410 ~~VVldVGaGt---------------GpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~ 473 (745)
T 3ua3_A 410 TVVIYLLGGGR---------------GPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRR 473 (745)
T ss_dssp EEEEEEESCTT---------------CHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTTTC
T ss_pred CcEEEEECCCC---------------CHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHH-hcCCCCe
Confidence 45899999999 998754433321 1359999999998775555544 4899999
Q ss_pred EEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEEEEec
Q 022597 188 VKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 188 v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
|++++||.+++-..... ...++.|+|+..-- .+...+.+..+.+.|+|||+++=+.
T Consensus 474 VtVI~gd~eev~lp~~~-~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 474 VTIIESDMRSLPGIAKD-RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp SEEEESCGGGHHHHHHH-TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEESCE
T ss_pred EEEEeCchhhccccccc-CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEECCc
Confidence 99999999887321111 12578999986532 2345677777788999999887443
No 279
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.39 E-value=6.3e-08 Score=88.29 Aligned_cols=99 Identities=11% Similarity=-0.071 Sum_probs=67.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH-HHhCCCCcEEEE--Ecc
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGL 194 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~-~~~gl~~~v~~~--~gd 194 (294)
.++.+|||+|||+ |..+..++.. ++|+++|+++ +...+++.. .......+++++ ++|
T Consensus 73 ~~g~~VLDlGcGt---------------G~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D 132 (265)
T 2oxt_A 73 ELTGRVVDLGCGR---------------GGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVD 132 (265)
T ss_dssp CCCEEEEEESCTT---------------SHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCC
T ss_pred CCCCEEEEeCcCC---------------CHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccC
Confidence 3567999999999 9988888775 6899999998 432221110 000111268888 888
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCC--ccc-----h--HHHHHHHHhcccCCe--EEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAE--KRM-----Y--QEYFELLLQLIRVGG--IIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~--~~~-----~--~~~~~~~~~lLkpgG--~ivid~ 244 (294)
+.+. +.++||+|+.|.. ... . ...++.+.+.|+||| .+++..
T Consensus 133 ~~~l--------~~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 133 IHTL--------PVERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp TTTS--------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HhHC--------CCCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 8763 1478999999854 111 1 136788889999999 998854
No 280
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.34 E-value=1.4e-06 Score=78.49 Aligned_cols=114 Identities=17% Similarity=0.093 Sum_probs=78.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
...++...+.+...+...++.+|||||||+ |..+..++.. + ..+|+++|+|+++++.++++
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~---------------G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~-- 73 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGT---------------GNLTKVLLQH-P-LKKLYVIELDREMVENLKSI-- 73 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCH---------------HHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS--
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCch---------------HHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc--
Confidence 456777766666666666778999999999 9999988875 2 47999999999999999876
Q ss_pred HhCCCCcEEEEEcchhhhH-HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhc--ccCCeEEEE
Q 022597 181 RAGVSHKVKIKHGLAADSL-KALILNGEASSYDFAFVDAEKRMYQEYFELLLQL--IRVGGIIVI 242 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l-~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~l--LkpgG~ivi 242 (294)
+ ..+++++++|+.+.- +.+ .+.+ .|+.+.+-.-....+..++.. .-+.+++++
T Consensus 74 --~-~~~v~~i~~D~~~~~~~~~-----~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 74 --G-DERLEVINEDASKFPFCSL-----GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp --C-CTTEEEECSCTTTCCGGGS-----CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEE
T ss_pred --c-CCCeEEEEcchhhCChhHc-----cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEE
Confidence 2 357999999997642 211 1234 677777644334444444432 234455544
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.33 E-value=3.6e-06 Score=87.59 Aligned_cols=145 Identities=10% Similarity=0.078 Sum_probs=97.2
Q ss_pred hcCCChHHHHHHHHHHHcC--CCCCCCCCHHHHHHHHHHHhhh------CCCeEEEEccccccccccccccccCCCcHHH
Q 022597 78 RNVREPEILRQLREETAGM--RGSQMQVSPDQAQLLAMLVQIL------GAQRCIEVGVYTVCVSSYSTSILSLFSGYSS 149 (294)
Q Consensus 78 ~~~~~~~~L~~~~~~~~~~--~~~~~~v~~~~~~lL~~l~~~~------~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~s 149 (294)
.....++..+.+.+..... .......++..+.+|..++... .+.+|+|.|||+ |...
T Consensus 272 ~r~~~DdL~ell~eya~k~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGS---------------G~FL 336 (878)
T 3s1s_A 272 RILTGDELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGS---------------GNLL 336 (878)
T ss_dssp HHCSSHHHHHHHHHHHTTSCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTT---------------SHHH
T ss_pred ccCchHHHHHHHHHHHHHhCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCc---------------cHHH
Confidence 3344566666666554322 2345567888899988884321 356999999999 9999
Q ss_pred HHHHHHCC--CCcEEEEEeCChHHHHHH--HHHHHHhCCCC---cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-
Q 022597 150 LAIALVLP--ESGCLVACERDARSLEVA--KKYYERAGVSH---KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR- 221 (294)
Q Consensus 150 l~la~~~~--~~~~v~~id~~~~~~~~A--~~~~~~~gl~~---~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~- 221 (294)
+.++..++ ...+++|+|+++.+++.| +.++..+++.+ ...+..+|..+.... ..++||+|+.+++-.
T Consensus 337 IaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-----~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 337 ATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-----DFANVSVVVMNPPYVS 411 (878)
T ss_dssp HHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG-----GGTTEEEEEECCBCCS
T ss_pred HHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc-----ccCCCCEEEECCCccc
Confidence 98888764 236899999999999999 65555433322 235555555442110 146899999987620
Q ss_pred -------------------------------chHHHHHHHHhcccCCeEEEE
Q 022597 222 -------------------------------MYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 222 -------------------------------~~~~~~~~~~~lLkpgG~ivi 242 (294)
.+..+++.+..+|++||.+.+
T Consensus 412 ~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 412 GVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred cccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 034577888899999998765
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.31 E-value=5.3e-07 Score=90.22 Aligned_cols=124 Identities=11% Similarity=0.103 Sum_probs=93.0
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC--------------CcEEE
Q 022597 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE--------------SGCLV 163 (294)
Q Consensus 98 ~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~--------------~~~v~ 163 (294)
..+.-.++...++|..++....+ +|+|.+||+ |...+.++..+.. ..+++
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGS---------------G~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~ 287 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGS---------------GGFFVSSDKFIEKHANVKHYNASEQKKQISVY 287 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTT---------------CHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEE
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCc---------------CcHHHHHHHHHHHhccccccchHHHhhhceEE
Confidence 34555778888888888876544 999999999 8777766544320 35899
Q ss_pred EEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc---------------------
Q 022597 164 ACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------- 222 (294)
Q Consensus 164 ~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~--------------------- 222 (294)
|+|+++.+++.|+.++...|+..++.+.++|+..... ....+||+|+.+++-..
T Consensus 288 G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~-----~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~ 362 (544)
T 3khk_A 288 GQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ-----HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGE 362 (544)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS-----CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--
T ss_pred EEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc-----cccccccEEEECCCcCCccccchhhhhhhhhhcCcccc
Confidence 9999999999999999999988766668888764311 11468999999876110
Q ss_pred -----------hHHHHHHHHhcccCCeEEEE
Q 022597 223 -----------YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 223 -----------~~~~~~~~~~lLkpgG~ivi 242 (294)
...+++.+..+|+|||.+++
T Consensus 363 ~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 363 KRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred cccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 12588999999999998544
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.26 E-value=2.8e-06 Score=84.97 Aligned_cols=141 Identities=11% Similarity=0.113 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHH-------cCCCCCCCCCHHHHHHHHHHHh----hhCCCeEEEEccccccccccccccccCCCcHHHHH
Q 022597 83 PEILRQLREETA-------GMRGSQMQVSPDQAQLLAMLVQ----ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLA 151 (294)
Q Consensus 83 ~~~L~~~~~~~~-------~~~~~~~~v~~~~~~lL~~l~~----~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~ 151 (294)
.+.+-++.|... +....+.-.++...++|..++. ...+.+|+|.+||+ |...+.
T Consensus 174 ~D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGS---------------G~fLi~ 238 (542)
T 3lkd_A 174 GDMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGS---------------GSLLLN 238 (542)
T ss_dssp TTHHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTT---------------STTGGG
T ss_pred hhHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccch---------------hHHHHH
Confidence 366666666532 1223455577888999999887 34567999999999 888888
Q ss_pred HHHHCC--CCcEEEEEeCChHHHHHHHHHHHHhCCC-CcEEEEEcchhhhH-HHHhhcCCCCceeEEEEcCCcc------
Q 022597 152 IALVLP--ESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSL-KALILNGEASSYDFAFVDAEKR------ 221 (294)
Q Consensus 152 la~~~~--~~~~v~~id~~~~~~~~A~~~~~~~gl~-~~v~~~~gda~~~l-~~l~~~~~~~~fD~vfiD~~~~------ 221 (294)
++..+. ...+++|+|+++.+++.|+.++...|+. +++.+.++|+...- +. ....+||+|+.+++-.
T Consensus 239 a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~----~~~~~fD~IvaNPPf~~~~~~~ 314 (542)
T 3lkd_A 239 AKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPT----QEPTNFDGVLMNPPYSAKWSAS 314 (542)
T ss_dssp HHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCC----SSCCCBSEEEECCCTTCCCCCC
T ss_pred HHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccc----cccccccEEEecCCcCCccccc
Confidence 887764 2578999999999999999999999986 47899999986530 10 1247899999986610
Q ss_pred -------c---h----------HHHHHHHHhccc-CCeEEEE
Q 022597 222 -------M---Y----------QEYFELLLQLIR-VGGIIVI 242 (294)
Q Consensus 222 -------~---~----------~~~~~~~~~lLk-pgG~ivi 242 (294)
. | ..+++.+..+|+ +||.+.+
T Consensus 315 ~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 315 SGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp GGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred hhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 0 1 247889999999 9998754
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.24 E-value=3.5e-06 Score=76.20 Aligned_cols=95 Identities=12% Similarity=-0.113 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHh
Q 022597 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA 182 (294)
Q Consensus 103 v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~ 182 (294)
.++...+.+...+...++.+|||||||+ |..+. +.. .+ ..+|+++|+|+++++.++++++..
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~---------------G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~ 66 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEIGPGL---------------AALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG 66 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEECCTT---------------TTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCC---------------cHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC
Confidence 4555555555555556677999999999 99999 653 21 233999999999999999877542
Q ss_pred CCCCcEEEEEcchhhh-HHHHhhcCCCCceeEEEEcCCc
Q 022597 183 GVSHKVKIKHGLAADS-LKALILNGEASSYDFAFVDAEK 220 (294)
Q Consensus 183 gl~~~v~~~~gda~~~-l~~l~~~~~~~~fD~vfiD~~~ 220 (294)
++++++++|+.+. ++.+... .+..|.|+.+.+.
T Consensus 67 ---~~v~~i~~D~~~~~~~~~~~~--~~~~~~vvsNlPY 100 (252)
T 1qyr_A 67 ---PKLTIYQQDAMTFNFGELAEK--MGQPLRVFGNLPY 100 (252)
T ss_dssp ---GGEEEECSCGGGCCHHHHHHH--HTSCEEEEEECCT
T ss_pred ---CceEEEECchhhCCHHHhhcc--cCCceEEEECCCC
Confidence 4799999999874 3332100 0245778877763
No 285
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.10 E-value=9.5e-07 Score=73.77 Aligned_cols=73 Identities=12% Similarity=0.164 Sum_probs=55.8
Q ss_pred EeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC---c-cchHHHHHHHHhcccCCeEE
Q 022597 165 CERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE---K-RMYQEYFELLLQLIRVGGII 240 (294)
Q Consensus 165 id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~---~-~~~~~~~~~~~~lLkpgG~i 240 (294)
+|+++++++.|+++... +++++.+|+.+.... ....++||+|+.... . .+....++.+.+.|||||.+
T Consensus 26 vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~---~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l 97 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS---AHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCL 97 (176)
T ss_dssp HHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG---CCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEE
T ss_pred eeCCHHHHHHHHHhccc-----CcEEEEechhcCccc---cCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEE
Confidence 99999999999987532 489999998764210 002578999997432 2 56689999999999999999
Q ss_pred EEecc
Q 022597 241 VIDNV 245 (294)
Q Consensus 241 vid~v 245 (294)
++.+.
T Consensus 98 ~~~~~ 102 (176)
T 2ld4_A 98 FLKEP 102 (176)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 99544
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.05 E-value=1.5e-05 Score=73.68 Aligned_cols=85 Identities=12% Similarity=0.102 Sum_probs=67.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++..+||.+||. |.-+..|+.. +++|+|+|.|+++++.|++ ++. +++++++++.
T Consensus 19 ~~~~gg~~VD~T~G~---------------GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f 75 (285)
T 1wg8_A 19 AVRPGGVYVDATLGG---------------AGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNF 75 (285)
T ss_dssp TCCTTCEEEETTCTT---------------SHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCG
T ss_pred CCCCCCEEEEeCCCC---------------cHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCc
Confidence 344567999999999 9999999886 6899999999999999998 643 5899999999
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchH
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQ 224 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~ 224 (294)
.+....+...+ .+++|.|+.|.+...++
T Consensus 76 ~~l~~~L~~~g-~~~vDgIL~DLGvSS~Q 103 (285)
T 1wg8_A 76 RHLKRHLAALG-VERVDGILADLGVSSFH 103 (285)
T ss_dssp GGHHHHHHHTT-CSCEEEEEEECSCCHHH
T ss_pred chHHHHHHHcC-CCCcCEEEeCCcccccc
Confidence 87644443333 36899999998865543
No 287
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.79 E-value=7.9e-05 Score=70.49 Aligned_cols=86 Identities=23% Similarity=0.141 Sum_probs=69.2
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.++..++|..+|. |.-+..++..++++++|+++|.++++++.|+ .+ ..+++++++++..
T Consensus 55 i~pggiyVD~TlG~---------------GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 55 IRPDGIYIDGTFGR---------------GGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFS 114 (347)
T ss_dssp CCTTCEEEESCCTT---------------SHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGG
T ss_pred CCCCCEEEEeCcCC---------------CHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHH
Confidence 44567999999999 9999999998877899999999999999884 33 2468999999998
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccc
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRM 222 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~ 222 (294)
+....+...+-.+++|.|+.|.+...
T Consensus 115 ~l~~~L~~~g~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILLDLGVSS 140 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEEECSCCH
T ss_pred HHHHHHHhcCCCCcccEEEECCccCH
Confidence 87665554443347999999987543
No 288
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.47 E-value=8.7e-05 Score=75.48 Aligned_cols=109 Identities=17% Similarity=0.154 Sum_probs=74.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHC-------CC----CcEEEEEeCChHHHHHHHH------------
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-------PE----SGCLVACERDARSLEVAKK------------ 177 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-------~~----~~~v~~id~~~~~~~~A~~------------ 177 (294)
-+|+|+|.|+ |+..+.+.+.. |. ..+++++|..|-..+.+++
T Consensus 60 ~~i~e~gfG~---------------G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~ 124 (689)
T 3pvc_A 60 CIFAETGFGT---------------GLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFA 124 (689)
T ss_dssp EEEEEECCTT---------------SHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHH
T ss_pred eEEEEecCch---------------HHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHH
Confidence 4899999999 99998877653 11 1578999995533333332
Q ss_pred --HHHHh-----C-----CCC---cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccch------HHHHHHHHhcccC
Q 022597 178 --YYERA-----G-----VSH---KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMY------QEYFELLLQLIRV 236 (294)
Q Consensus 178 --~~~~~-----g-----l~~---~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~------~~~~~~~~~lLkp 236 (294)
.++.. | +.+ .+++..||+.+.++.+... ....+|.+|+|+..+.+ .++|..+.++++|
T Consensus 125 ~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~-~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~ 203 (689)
T 3pvc_A 125 EQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDS-LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRP 203 (689)
T ss_dssp HHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGG-GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEE
T ss_pred HHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccc-cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCC
Confidence 22211 1 112 5788999999988765211 03689999999864433 7899999999999
Q ss_pred CeEEEEecc
Q 022597 237 GGIIVIDNV 245 (294)
Q Consensus 237 gG~ivid~v 245 (294)
||.+.-..+
T Consensus 204 g~~~~t~~~ 212 (689)
T 3pvc_A 204 GGTFSTFTA 212 (689)
T ss_dssp EEEEEESCC
T ss_pred CCEEEeccC
Confidence 999876544
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.43 E-value=0.00064 Score=67.60 Aligned_cols=148 Identities=11% Similarity=0.118 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHc----C--CCCCCCCCHHHHHHHHHHHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC
Q 022597 84 EILRQLREETAG----M--RGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP 157 (294)
Q Consensus 84 ~~L~~~~~~~~~----~--~~~~~~v~~~~~~lL~~l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~ 157 (294)
+.+-.+.|...+ . ...+.-.++...++|..++....+.+|+|-.||| |...+.....+.
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGs---------------GgfL~~a~~~l~ 240 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGT---------------GGFLVEAFEHLE 240 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTT---------------THHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCc---------------chHHHHHHHHHH
Confidence 456666665321 1 2345567888999999999888888999999999 777666555442
Q ss_pred C------------CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc----
Q 022597 158 E------------SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---- 221 (294)
Q Consensus 158 ~------------~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~---- 221 (294)
. ...++|+|+++.....|+-++--.|... -.+.++|..... ....+...+||+|+.+++-.
T Consensus 241 ~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~-~~I~~~dtL~~~--~~~~~~~~~fD~Il~NPPf~~~~~ 317 (530)
T 3ufb_A 241 RQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEY-PRIDPENSLRFP--LREMGDKDRVDVILTNPPFGGEEE 317 (530)
T ss_dssp TTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSC-CEEECSCTTCSC--GGGCCGGGCBSEEEECCCSSCBCC
T ss_pred HhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcc-ccccccccccCc--hhhhcccccceEEEecCCCCcccc
Confidence 1 2469999999999999999998888763 567788875421 11112245799999987621
Q ss_pred ---------------chHHHHHHHHhccc-------CCeEEEE---ecccCCC
Q 022597 222 ---------------MYQEYFELLLQLIR-------VGGIIVI---DNVLWHG 249 (294)
Q Consensus 222 ---------------~~~~~~~~~~~lLk-------pgG~ivi---d~vl~~g 249 (294)
....+++.+...|+ +||.+.+ +.+++.|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~ 370 (530)
T 3ufb_A 318 KGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSD 370 (530)
T ss_dssp HHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCC
T ss_pred ccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhcc
Confidence 13456777777776 6876543 4455443
No 290
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.31 E-value=0.00073 Score=63.03 Aligned_cols=104 Identities=21% Similarity=0.235 Sum_probs=67.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHH---HCCCCc--EEEEEeCCh--------H-HHHHHHHHHHHh----
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIAL---VLPESG--CLVACERDA--------R-SLEVAKKYYERA---- 182 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~---~~~~~~--~v~~id~~~--------~-~~~~A~~~~~~~---- 182 (294)
-+|+|+|-|| |+..+.... ...+.. +++++|.++ + ..+..+..+...
T Consensus 98 ~~IlE~GFGT---------------GLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~ 162 (308)
T 3vyw_A 98 IRILDVGFGL---------------GYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE 162 (308)
T ss_dssp EEEEEECCTT---------------SHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE
T ss_pred cEEEEeCCCc---------------cHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc
Confidence 3899999999 997654332 223344 457777532 1 223333333332
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccc-hHHHHHHHHhcccCCeEEEEe
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRM-YQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~-~~~~~~~~~~lLkpgG~ivid 243 (294)
+-.-.+++..||+.+.++.+. ..++|.+|.|+- ++. -.++|+.+.++++|||+++--
T Consensus 163 ~~~v~L~l~~GDa~~~l~~l~----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 163 GERLSLKVLLGDARKRIKEVE----NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp CSSEEEEEEESCHHHHGGGCC----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEES
T ss_pred CCcEEEEEEechHHHHHhhhc----ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEE
Confidence 111135778899998887651 357999999974 233 368999999999999999743
No 291
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.28 E-value=0.00056 Score=57.53 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=56.2
Q ss_pred CCeEEEEccccccccccccccccCCCcH-HHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGY-SSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~-~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
+.++||||||. |+ .+..|+... +..|+++|+++..++ ++..|..+-
T Consensus 36 ~~rVlEVG~G~---------------g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P 82 (153)
T 2k4m_A 36 GTRVVEVGAGR---------------FLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSP 82 (153)
T ss_dssp SSEEEEETCTT---------------CCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSC
T ss_pred CCcEEEEccCC---------------ChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCC
Confidence 45999999999 94 899988753 578999999998765 777777653
Q ss_pred HHHHhhcCCCCceeEEE-EcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 199 LKALILNGEASSYDFAF-VDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vf-iD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
...+ -+.||+|+ +.++.+..+.++ .+.+.+ |.-+++--
T Consensus 83 ~~~~-----Y~~~DLIYsirPP~El~~~i~-~lA~~v--~adliI~p 121 (153)
T 2k4m_A 83 RMEI-----YRGAALIYSIRPPAEIHSSLM-RVADAV--GARLIIKP 121 (153)
T ss_dssp CHHH-----HTTEEEEEEESCCTTTHHHHH-HHHHHH--TCEEEEEC
T ss_pred cccc-----cCCcCEEEEcCCCHHHHHHHH-HHHHHc--CCCEEEEc
Confidence 3322 25899995 455554444444 444432 34444433
No 292
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.10 E-value=0.0014 Score=62.08 Aligned_cols=78 Identities=8% Similarity=-0.018 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHHhhhC------CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH
Q 022597 101 MQVSPDQAQLLAMLVQILG------AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV 174 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~~~~~------~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~ 174 (294)
..+++...+-+...+.+.+ ...|||||.|. |..|..|+.... ..+|+++|+|++.+..
T Consensus 34 FL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~---------------G~LT~~Ll~~~~-~~~vvavE~D~~l~~~ 97 (353)
T 1i4w_A 34 YLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGV---------------GIQSAIFYNKYC-PRQYSLLEKRSSLYKF 97 (353)
T ss_dssp CBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTT---------------CHHHHHHHHHHC-CSEEEEECCCHHHHHH
T ss_pred ccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCC---------------CHHHHHHHhhCC-CCEEEEEecCHHHHHH
Confidence 4456665555555555443 36899999999 999999998642 3689999999999988
Q ss_pred HHHHHHHhCCCCcEEEEEcchhhh
Q 022597 175 AKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 175 A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
.++.+ . .++++++++|+.++
T Consensus 98 L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 98 LNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHT-T---TSSCEEECSCTTCH
T ss_pred HHHhc-c---CCCEEEEECCccch
Confidence 88766 2 35899999999765
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.06 E-value=0.0021 Score=58.67 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=47.7
Q ss_pred HHHHHHhh--hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCc
Q 022597 110 LLAMLVQI--LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK 187 (294)
Q Consensus 110 lL~~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~ 187 (294)
++..++.. .++..|||.+||+ |..++..+.. +.+++++|+++++++.|+++++.......
T Consensus 224 l~~~~i~~~~~~~~~vlD~f~Gs---------------Gt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~~ 285 (297)
T 2zig_A 224 LAERLVRMFSFVGDVVLDPFAGT---------------GTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGFS 285 (297)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTT---------------THHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHhCCCCCEEEECCCCC---------------CHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhccccc
Confidence 44444433 3567999999999 9888886663 56999999999999999999988654444
Q ss_pred EEE
Q 022597 188 VKI 190 (294)
Q Consensus 188 v~~ 190 (294)
+.+
T Consensus 286 ~~~ 288 (297)
T 2zig_A 286 LEV 288 (297)
T ss_dssp EEE
T ss_pred hhh
Confidence 443
No 294
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.86 E-value=0.0032 Score=57.97 Aligned_cols=102 Identities=19% Similarity=0.237 Sum_probs=70.1
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.+++ .|...-+.....+.
T Consensus 163 ~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~ 222 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGL--------------GHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDP 222 (340)
T ss_dssp TCCTTSEEEEECCSTT--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCH
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCH
Confidence 4456779999999865 88888899887 4799999999998876644 56542121111222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.+.+. .+.+|.||..... ...++.+.+.|++||.++.-..
T Consensus 223 ~~~~~~~-----~g~~d~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 223 AAWLQKE-----IGGAHGVLVTAVS---PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HHHHHHH-----HSSEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHHHHh-----CCCCCEEEEeCCC---HHHHHHHHHHhccCCEEEEeCC
Confidence 2333321 2479999877643 3567788999999999987543
No 295
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.77 E-value=0.0032 Score=58.80 Aligned_cols=104 Identities=21% Similarity=0.284 Sum_probs=68.8
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++++||-+|+|.+ |..++.+++... ..+|+++|.+++..+.+++ .|...-+.....+.
T Consensus 187 ~~~~g~~VlV~GaG~v--------------G~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~ 247 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAV--------------GLSALLAAKVCG-ASIIIAVDIVESRLELAKQ----LGATHVINSKTQDP 247 (371)
T ss_dssp CCCTTCEEEEESCSHH--------------HHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH----HTCSEEEETTTSCH
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCCEEecCCccCH
Confidence 3456679999999765 788888888763 2379999999998877754 45432111111222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.+.++ . .+.+|+||-..+. ...++.+.+.|++||.+++-..
T Consensus 248 ~~~~~~~---~-~gg~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 248 VAAIKEI---T-DGGVNFALESTGS---PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HHHHHHH---T-TSCEEEEEECSCC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHh---c-CCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEeCC
Confidence 2333332 1 2379999876653 3567788999999999987544
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.76 E-value=0.0038 Score=58.16 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=59.4
Q ss_pred CCeEEEEcccc--ccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 120 AQRCIEVGVYT--VCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~--~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
+.+|||+|+|+ || --++..+.+..|.++.|+++|+++-.. ..+ .+++||..+
T Consensus 110 gmrVLDLGA~s~kg~-------------APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~ 163 (344)
T 3r24_A 110 NMRVIHFGAGSDKGV-------------APGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIGDCAT 163 (344)
T ss_dssp TCEEEEESCCCTTSB-------------CHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEESCGGG
T ss_pred CCEEEeCCCCCCCCC-------------CCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEccccc
Confidence 35999999732 00 222344455566567999999988421 112 448999754
Q ss_pred hHHHHhhcCCCCceeEEEEcCCcc--------------chHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~--------------~~~~~~~~~~~lLkpgG~ivid 243 (294)
.. ..++||+|+.|..+. -.+..++.+.+.|+|||.+++-
T Consensus 164 ~~-------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 164 VH-------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp EE-------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cc-------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 21 147899999984311 1345566677899999999987
No 297
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.69 E-value=0.0021 Score=54.30 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=62.0
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++||.+|++.|. |.....++... +.+|++++.+++..+.+++ .|... +......
T Consensus 36 ~~~g~~vlV~Ga~ggi-------------G~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~---~~d~~~~ 93 (198)
T 1pqw_A 36 LSPGERVLIHSATGGV-------------GMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVEY---VGDSRSV 93 (198)
T ss_dssp CCTTCEEEETTTTSHH-------------HHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCSE---EEETTCS
T ss_pred CCCCCEEEEeeCCChH-------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCE---EeeCCcH
Confidence 3456799999953211 55555555554 5799999999987765543 45432 1211111
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..+.+........+|.+|...+. ..++.+.+.|++||.++.-.
T Consensus 94 ~~~~~~~~~~~~~~~D~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 94 DFADEILELTDGYGVDVVLNSLAG----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp THHHHHHHHTTTCCEEEEEECCCT----HHHHHHHHTEEEEEEEEECS
T ss_pred HHHHHHHHHhCCCCCeEEEECCch----HHHHHHHHHhccCCEEEEEc
Confidence 222222221113469999977652 56788899999999998743
No 298
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.66 E-value=0.01 Score=55.10 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=69.3
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
..+.++++||-+|+|.+ |..++.+++.. +. +|+++|.+++..+.++ +.|... ++..
T Consensus 167 ~~~~~g~~VlV~GaG~v--------------G~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~----~lGa~~---vi~~ 223 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPI--------------GMVTLLVAKAM--GAAQVVVTDLSATRLSKAK----EIGADL---VLQI 223 (356)
T ss_dssp HTCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCSEEEEEESCHHHHHHHH----HTTCSE---EEEC
T ss_pred cCCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCEEEEECCCHHHHHHHH----HhCCCE---EEcC
Confidence 45567789999999764 88888888876 45 8999999999887665 456542 2222
Q ss_pred c---hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 L---AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 d---a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+ ..+..+.+.... ...+|+||...+. ...++.+++.|++||.++.-.
T Consensus 224 ~~~~~~~~~~~i~~~~-~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 224 SKESPQEIARKVEGQL-GCKPEVTIECTGA---EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp SSCCHHHHHHHHHHHH-TSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred cccccchHHHHHHHHh-CCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEe
Confidence 2 223333322211 2579999876653 345677889999999998744
No 299
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.64 E-value=0.0031 Score=59.58 Aligned_cols=109 Identities=17% Similarity=0.295 Sum_probs=70.8
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
.+.+.++++||-+|+|.+ |..++.+++... ..+|+++|.+++.++.++ +.|. +-+.....
T Consensus 180 ~~~~~~g~~VlV~GaG~v--------------G~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa-~~i~~~~~ 239 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPV--------------GRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF-ETIDLRNS 239 (398)
T ss_dssp HTTCCTTCEEEEECCSHH--------------HHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC-EEEETTSS
T ss_pred HcCCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC-cEEcCCCc
Confidence 345567789999999765 778888888763 238999999999887664 3454 21211112
Q ss_pred ch-hhhHHHHhhcCCCCceeEEEEcCCccc-----------hHHHHHHHHhcccCCeEEEEecc
Q 022597 194 LA-ADSLKALILNGEASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 194 da-~~~l~~l~~~~~~~~fD~vfiD~~~~~-----------~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+. .+.+..+. ....+|+||-..+... ....++.+++.|++||.+++-..
T Consensus 240 ~~~~~~~~~~~---~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 240 APLRDQIDQIL---GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SCHHHHHHHHH---SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred chHHHHHHHHh---CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 22 33333331 1236999987665332 13468888999999999986443
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.57 E-value=0.0031 Score=60.31 Aligned_cols=86 Identities=8% Similarity=0.021 Sum_probs=57.1
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|||+||++ |..|..++.. +++|++||+.+-. . .+. -..+|+++.+|+.+
T Consensus 210 ~~G~~vlDLGAaP---------------GGWT~~l~~r---g~~V~aVD~~~l~-~----~l~---~~~~V~~~~~d~~~ 263 (375)
T 4auk_A 210 ANGMWAVDLGACP---------------GGWTYQLVKR---NMWVYSVDNGPMA-Q----SLM---DTGQVTWLREDGFK 263 (375)
T ss_dssp CTTCEEEEETCTT---------------CHHHHHHHHT---TCEEEEECSSCCC-H----HHH---TTTCEEEECSCTTT
T ss_pred CCCCEEEEeCcCC---------------CHHHHHHHHC---CCEEEEEEhhhcC-h----hhc---cCCCeEEEeCcccc
Confidence 4677999999999 8888777764 6899999976421 1 111 13479999999876
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccC
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRV 236 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkp 236 (294)
..+ ..+++|.|+.|... ......+.+.+.|..
T Consensus 264 ~~~------~~~~~D~vvsDm~~-~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 264 FRP------TRSNISWMVCDMVE-KPAKVAALMAQWLVN 295 (375)
T ss_dssp CCC------CSSCEEEEEECCSS-CHHHHHHHHHHHHHT
T ss_pred ccC------CCCCcCEEEEcCCC-ChHHhHHHHHHHHhc
Confidence 532 14689999999753 223333444443333
No 301
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.51 E-value=0.015 Score=53.87 Aligned_cols=108 Identities=18% Similarity=0.164 Sum_probs=71.8
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcE-EEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~-v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
.....++++||-+|+|.+ |..++.+++.. +.+ |+++|.+++..+.+++. . .+-+....
T Consensus 174 ~~~~~~g~~VlV~GaG~v--------------G~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~ 232 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPI--------------GLITMLCAKAA--GACPLVITDIDEGRLKFAKEI-C----PEVVTHKV 232 (363)
T ss_dssp HHTCCTTCCEEEECCSHH--------------HHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH-C----TTCEEEEC
T ss_pred HcCCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-c----hhcccccc
Confidence 345567789999999765 88888888876 455 99999999999888765 1 12233321
Q ss_pred --cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 193 --GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 193 --gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+..+..+.+........+|+||--.+. ...++.+.+.|++||.+++-..
T Consensus 233 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 233 ERLSAEESAKKIVESFGGIEPAVALECTGV---ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CSCCHHHHHHHHHHHTSSCCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECCC
T ss_pred cccchHHHHHHHHHHhCCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEcc
Confidence 1122333333222224579999876653 3457778899999999987543
No 302
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.44 E-value=0.0089 Score=55.75 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=67.8
Q ss_pred HhhhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 115 VQILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 115 ~~~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
.....+++||-+| +|.+ |..++.+++.. +++|++++.+++..+.+++ .|...-+.....
T Consensus 159 ~~~~~g~~VlV~Ga~G~i--------------G~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~ 218 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGT--------------GQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDRPINYKTE 218 (362)
T ss_dssp TCCCTTCEEEETTTTBTT--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTS
T ss_pred cCCCCCCEEEEeCCCcHH--------------HHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCCh
Confidence 3456678999999 4543 88888888876 5799999999988877654 454321111111
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..+.+... . ...+|+||...+. ..++.+.+.|+++|.++.-.
T Consensus 219 ~~~~~~~~~---~-~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 219 PVGTVLKQE---Y-PEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CHHHHHHHH---C-TTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred hHHHHHHHh---c-CCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 222223322 1 3579999877653 46778899999999988643
No 303
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.44 E-value=0.00076 Score=61.98 Aligned_cols=119 Identities=16% Similarity=0.084 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHh--hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 103 VSPDQAQLLAMLVQ--ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 103 v~~~~~~lL~~l~~--~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
.+...-+|+...-+ +.+..+|||+|||+ |..+...+...+ ...++++|+.-+........ +
T Consensus 56 rSRaA~KL~ei~ek~~l~~~~~VLDLGaAP---------------GGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~ 118 (277)
T 3evf_A 56 VSRGTAKLRWFHERGYVKLEGRVIDLGCGR---------------GGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-Q 118 (277)
T ss_dssp SSTHHHHHHHHHHTTSSCCCEEEEEETCTT---------------CHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-C
T ss_pred cccHHHHHHHHHHhCCCCCCCEEEEecCCC---------------CHHHHHHHHhcC-CCcceeEEEeccCccccccc-C
Confidence 44444444433332 34556999999999 888887776433 35677777764321000000 0
Q ss_pred HhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------ch--HHHHHHHHhcccCC-eEEEEecccC
Q 022597 181 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MY--QEYFELLLQLIRVG-GIIVIDNVLW 247 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------~~--~~~~~~~~~lLkpg-G~ivid~vl~ 247 (294)
..|. ++....+++ +.. .+ ..++||+|+.|..+. .+ ..+++.+.+.|+|| |.+|+ .++-
T Consensus 119 ~~g~--~ii~~~~~~-dv~-~l----~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~ 186 (277)
T 3evf_A 119 SLGW--NIITFKDKT-DIH-RL----EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA 186 (277)
T ss_dssp BTTG--GGEEEECSC-CTT-TS----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC
T ss_pred cCCC--CeEEEeccc-eeh-hc----CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC
Confidence 0111 233345554 221 11 257899999996322 11 13467778999999 99999 4543
No 304
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.43 E-value=0.0095 Score=60.15 Aligned_cols=108 Identities=20% Similarity=0.232 Sum_probs=73.6
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHC-------CC----CcEEEEEeC---ChHHHHHHH-----------
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-------PE----SGCLVACER---DARSLEVAK----------- 176 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-------~~----~~~v~~id~---~~~~~~~A~----------- 176 (294)
+|+|+|.|| |+..+...+.. |. .-+++++|. +++.+..+-
T Consensus 69 ~i~e~gfG~---------------Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~ 133 (676)
T 3ps9_A 69 VVAESGFGT---------------GLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAE 133 (676)
T ss_dssp EEEEECCTT---------------SHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHH
T ss_pred EEEEeCCch---------------HHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHH
Confidence 899999999 99888776653 11 146899999 666555332
Q ss_pred HHHHHh-----CC--------CCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-----ccc-hHHHHHHHHhcccCC
Q 022597 177 KYYERA-----GV--------SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRM-YQEYFELLLQLIRVG 237 (294)
Q Consensus 177 ~~~~~~-----gl--------~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-----~~~-~~~~~~~~~~lLkpg 237 (294)
+..+.. |+ .-.+++..||+.+.++.+... ....||.+|.|+. ++. -.++|..+.++++||
T Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~-~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g 212 (676)
T 3ps9_A 134 QLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDS-LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPG 212 (676)
T ss_dssp HHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGG-GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEE
T ss_pred HHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhcccc-cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCC
Confidence 222221 11 124678889999888765211 0367999999975 222 468899999999999
Q ss_pred eEEEEecc
Q 022597 238 GIIVIDNV 245 (294)
Q Consensus 238 G~ivid~v 245 (294)
|.+.-...
T Consensus 213 ~~~~t~~~ 220 (676)
T 3ps9_A 213 GTLATFTS 220 (676)
T ss_dssp EEEEESCC
T ss_pred CEEEeccC
Confidence 99886543
No 305
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.42 E-value=0.023 Score=52.07 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=72.3
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
....++++||-.|+|.+ |..++.+++... ...++++|.+++.++.++ +.|..+-+.....+
T Consensus 156 ~~~~~g~~VlV~GaG~v--------------G~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~----~lGa~~~i~~~~~~ 216 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTI--------------GLLAIQCAVALG-AKSVTAIDISSEKLALAK----SFGAMQTFNSSEMS 216 (346)
T ss_dssp TTCCTTSEEEEECCSHH--------------HHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSEEEETTTSC
T ss_pred hccCCCCEEEEECCCCc--------------chHHHHHHHHcC-CcEEEEEechHHHHHHHH----HcCCeEEEeCCCCC
Confidence 34556789999999865 777778888764 456789999999877665 45655433332233
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
..+....+.. ...+|.||...+. ...++.+.++|++||.+++-...
T Consensus 217 ~~~~~~~~~~---~~g~d~v~d~~G~---~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 217 APQMQSVLRE---LRFNQLILETAGV---PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HHHHHHHHGG---GCSSEEEEECSCS---HHHHHHHHHHCCTTCEEEECCCC
T ss_pred HHHHHHhhcc---cCCcccccccccc---cchhhhhhheecCCeEEEEEecc
Confidence 4344443321 3568888876643 35677888999999999986554
No 306
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.42 E-value=0.0051 Score=57.40 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=69.0
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++||-+|+|.+ |..++.+++.. +++|++++.+++..+.+++ .|... ++..+.
T Consensus 186 ~~~~g~~VlV~G~G~v--------------G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~ 242 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGV--------------ALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGADH---GINRLE 242 (363)
T ss_dssp CCCTTCEEEEESSBHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSE---EEETTT
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCCE---EEcCCc
Confidence 3456679999998765 88888888876 5799999999998877654 56542 222222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
.+..+.+........+|+||-..+. ..++.+.+.|++||.+++-...
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred ccHHHHHHHHhCCCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 2222222211113479999977763 2466778899999999876543
No 307
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.38 E-value=0.0077 Score=56.43 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=70.8
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
...+.++++||-+|+|.+ |..++.+++..+ ..+|++++.+++..+.+++ .|...-+.....
T Consensus 177 ~~~~~~g~~VlV~GaG~v--------------G~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~ 237 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVI--------------GLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAG 237 (370)
T ss_dssp HHTCCTTCEEEEECCSHH--------------HHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSS
T ss_pred hcCCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCc
Confidence 345567789999999765 888888888764 2389999999998876654 565422211112
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+..+.+.+..... .+.+|+||-..+. ...++.+.+.|++||.+++-..
T Consensus 238 ~~~~~i~~~~~~~-~gg~Dvvid~~G~---~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 238 DVVEAIAGPVGLV-PGGVDVVIECAGV---AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CHHHHHHSTTSSS-TTCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred CHHHHHHhhhhcc-CCCCCEEEECCCC---HHHHHHHHHHhccCCEEEEEec
Confidence 2222222200011 2489999876543 3567788999999999987544
No 308
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.35 E-value=0.0053 Score=56.33 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=66.2
Q ss_pred hhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++||-+| +|.+ |..+..+++.. +++|++++.+++..+.+++ .|... ++..+.
T Consensus 146 ~~~g~~vlV~Ga~g~i--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~---~~~~~~ 202 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGV--------------GLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAEY---LINASK 202 (334)
T ss_dssp CCTTCEEEESSTTBHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSE---EEETTT
T ss_pred CCCCCEEEEECCCCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EEeCCC
Confidence 44667999999 4433 77777777765 5799999999998876654 45432 222222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+..+.+........+|++|...+. ..++.+.+.|++||.++.-.
T Consensus 203 ~~~~~~~~~~~~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 203 EDILRQVLKFTNGKGVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp SCHHHHHHHHTTTSCEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred chHHHHHHHHhCCCCceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 2223332222223579999877654 45777889999999998754
No 309
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.35 E-value=0.035 Score=50.88 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=70.6
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
....++++||=+|+|.+ |..+..+++... +.+|+++|.+++..+.++ +.|...-+.....|
T Consensus 159 ~~~~~g~~VlV~GaG~~--------------g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~ 219 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGL--------------GNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGADVTINSGDVN 219 (348)
T ss_dssp HTCCTTCEEEEECCSHH--------------HHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCC
T ss_pred cCCCCCCEEEEEcCCCc--------------cHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCC
Confidence 34556789999999863 555555565554 689999999998776554 45655434444444
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..+.+.++. ....+|.++.+... ...++...+.|+++|.+++-..
T Consensus 220 ~~~~v~~~t---~g~g~d~~~~~~~~---~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 220 PVDEIKKIT---GGLGVQSAIVCAVA---RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp HHHHHHHHT---TSSCEEEEEECCSC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhhhhc---CCCCceEEEEeccC---cchhheeheeecCCceEEEEec
Confidence 444444431 23468888887653 3567788899999999987543
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.32 E-value=0.0083 Score=55.52 Aligned_cols=107 Identities=20% Similarity=0.205 Sum_probs=70.4
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
...+.++++||-+|+|.+ |..++.+++.. +. +|+++|.+++..+.+++ .|... ++.
T Consensus 161 ~~~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~----lGa~~---vi~ 217 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPV--------------GLMSVAGANHL--GAGRIFAVGSRKHCCDIALE----YGATD---IIN 217 (352)
T ss_dssp HTTCCTTCCEEEECCSHH--------------HHHHHHHHHTT--TCSSEEEECCCHHHHHHHHH----HTCCE---EEC
T ss_pred hcCCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCcEEEEECCCHHHHHHHHH----hCCce---EEc
Confidence 345567789999999765 88888888865 45 89999999988776654 46532 222
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
....+..+.+........+|+||...+.. ..++.+.+.|++||.++.-...
T Consensus 218 ~~~~~~~~~v~~~t~g~g~D~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 218 YKNGDIVEQILKATDGKGVDKVVIAGGDV---HTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp GGGSCHHHHHHHHTTTCCEEEEEECSSCT---THHHHHHHHEEEEEEEEECCCC
T ss_pred CCCcCHHHHHHHHcCCCCCCEEEECCCCh---HHHHHHHHHHhcCCEEEEeccc
Confidence 21222223222222234799998665432 4567788999999999875543
No 311
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.30 E-value=0.012 Score=55.78 Aligned_cols=107 Identities=11% Similarity=0.131 Sum_probs=67.4
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++||-+|+|.+ |..++.+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..
T Consensus 211 ~~~g~~VlV~GaG~v--------------G~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~ 271 (404)
T 3ip1_A 211 IRPGDNVVILGGGPI--------------GLAAVAILKHAG-ASKVILSEPSEVRRNLAKE----LGADHVIDPTKENFV 271 (404)
T ss_dssp CCTTCEEEEECCSHH--------------HHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTTSCHH
T ss_pred CCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEEcCCCCCHH
Confidence 345679999999765 888888888763 2389999999998877754 454321111112223
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCcc--chHHHHHHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKR--MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~--~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.+.++ .....+|+||--.+.. .+...++.+++.+++||.+++-..
T Consensus 272 ~~i~~~---t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 272 EAVLDY---TNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HHHHHH---TTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred HHHHHH---hCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 333332 2234799999766544 333444444455599999987544
No 312
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.29 E-value=0.012 Score=54.28 Aligned_cols=104 Identities=20% Similarity=0.263 Sum_probs=71.2
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++||-+|+|.+ |..++.+++... +.+|+++|.+++..+.+++ .|...-+.. ..+.
T Consensus 168 ~~~~g~~vlv~GaG~v--------------G~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~-~~~~ 227 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGL--------------GHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADAAVKS-GAGA 227 (345)
T ss_dssp GCCTTCEEEEECCSHH--------------HHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-STTH
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCEEEcC-CCcH
Confidence 4456789999999765 888888888764 5799999999998877654 565432221 1122
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.+.++. ....+|+||--.+. ...++.+.+.|++||.+++-..
T Consensus 228 ~~~v~~~t---~g~g~d~v~d~~G~---~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 228 ADAIRELT---GGQGATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HHHHHHHH---GGGCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHHHHHh---CCCCCeEEEECCCC---HHHHHHHHHHHhcCCEEEEECC
Confidence 33333321 12479999876653 3467788999999999987544
No 313
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.28 E-value=0.0078 Score=55.19 Aligned_cols=103 Identities=20% Similarity=0.147 Sum_probs=67.2
Q ss_pred HhhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 115 VQILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 115 ~~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
..+.++++||-+|+ |.+ |..+..+++.. +.+|++++.+++..+.+. ++.|...-+.....
T Consensus 145 ~~~~~g~~vlI~Ga~g~i--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~~~~~~~~~ 205 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAV--------------GSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFDGAIDYKNE 205 (336)
T ss_dssp TCCCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCSEEEETTTS
T ss_pred cCCCCCCEEEEECCCCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCCEEEECCCH
Confidence 34556789999998 332 66777777765 579999999998776652 33455321111112
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..+.+.+. . .+.+|++|...+. ..++.+.+.|++||.++.-.
T Consensus 206 ~~~~~~~~~---~-~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 206 DLAAGLKRE---C-PKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CHHHHHHHH---C-TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHHh---c-CCCceEEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 222233332 1 3579999887763 46788899999999998743
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.27 E-value=0.01 Score=56.88 Aligned_cols=60 Identities=12% Similarity=0.149 Sum_probs=48.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHH-HHCCCCcEEEEEeCChHHHHHHHHHHHH--hCCC-CcEEEEE
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIA-LVLPESGCLVACERDARSLEVAKKYYER--AGVS-HKVKIKH 192 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la-~~~~~~~~v~~id~~~~~~~~A~~~~~~--~gl~-~~v~~~~ 192 (294)
.++..++|||++. |..++.++ +..++.++|+++|++|+..+..+++++. ++.. ++++++.
T Consensus 225 ~~~~~viDvGAn~---------------G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASI---------------GESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTT---------------SHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCc---------------CHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 4667999999999 99999988 5555458999999999999999999998 3322 4566553
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.27 E-value=0.025 Score=52.29 Aligned_cols=108 Identities=17% Similarity=0.232 Sum_probs=69.2
Q ss_pred HHhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE-
Q 022597 114 LVQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH- 192 (294)
Q Consensus 114 l~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~- 192 (294)
...+.++++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.++ +.|...-+....
T Consensus 163 ~~~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~~~~~~~~ 222 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPI--------------GLVSVLAAKAY--GAFVVCTARSPRRLEVAK----NCGADVTLVVDPA 222 (352)
T ss_dssp HHTCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HTTCSEEEECCTT
T ss_pred hcCCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCEEEEEcCCHHHHHHHH----HhCCCEEEcCccc
Confidence 345567789999998754 77888888876 467999999999887765 456542121110
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+..+.+.+.........+|+||-..+. ...++.+++.|++||.++.-.
T Consensus 223 ~~~~~~i~~~~~~~~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 223 KEEESSIIERIRSAIGDLPNVTIDCSGN---EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp TSCHHHHHHHHHHHSSSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred ccHHHHHHHHhccccCCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 2222223322110002469999876653 345677889999999998744
No 316
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.25 E-value=0.0063 Score=55.69 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=67.1
Q ss_pred hhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++||-+| +|.+ |..+..+++.. +++|++++.+++..+.+++ .|... ++....
T Consensus 138 ~~~g~~VlV~Ga~g~i--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~---~~~~~~ 194 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGV--------------GSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAWE---TIDYSH 194 (325)
T ss_dssp CCTTCEEEESSTTSHH--------------HHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSE---EEETTT
T ss_pred CCCCCEEEEEcCCcHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCE---EEeCCC
Confidence 44567999999 5543 77777777765 5799999999998877754 45432 222222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+..+.+........+|++|...+. ..++.+.+.|++||.++.-..
T Consensus 195 ~~~~~~~~~~~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 195 EDVAKRVLELTDGKKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp SCHHHHHHHHTTTCCEEEEEESSCG----GGHHHHHTTEEEEEEEEECCC
T ss_pred ccHHHHHHHHhCCCCceEEEECCCh----HHHHHHHHHhcCCCEEEEEec
Confidence 2223332222223579999877764 356778899999999987543
No 317
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.23 E-value=0.011 Score=55.32 Aligned_cols=103 Identities=16% Similarity=0.251 Sum_probs=68.2
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH-- 192 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-- 192 (294)
...++++||-+|+|.+ |..++.+++.. ++ +|+++|.+++..+.++ +.|...-+....
T Consensus 192 ~~~~g~~VlV~GaG~v--------------G~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~ 251 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCV--------------GLSAIIGCKIA--GASRIIAIDINGEKFPKAK----ALGATDCLNPRELD 251 (376)
T ss_dssp CCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCSEEEEECSCGGGHHHHH----HTTCSEEECGGGCS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCeEEEEcCCHHHHHHHH----HhCCcEEEcccccc
Confidence 3445679999999765 88888888876 45 8999999999887664 456532111110
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~v 245 (294)
.+..+.+.++. .+.+|+||--.+. ...++.+.+.|++| |.+++-..
T Consensus 252 ~~~~~~v~~~~----~~g~Dvvid~~G~---~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 252 KPVQDVITELT----AGGVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCHHHHHHHHH----TSCBSEEEESSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred chHHHHHHHHh----CCCccEEEECCCC---HHHHHHHHHHhhcCCCEEEEECC
Confidence 12223333321 2479999876643 35677889999999 99987543
No 318
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.22 E-value=0.015 Score=53.58 Aligned_cols=101 Identities=23% Similarity=0.190 Sum_probs=67.7
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
....+++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.+++ .|...-+.....+.
T Consensus 161 ~~~~g~~VlV~GaG~v--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~ 220 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGL--------------GHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDA 220 (339)
T ss_dssp TCCTTCEEEEECCSTT--------------HHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCH
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccH
Confidence 4556789999999754 88888888876 4799999999998877653 45432111111122
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.+.+. .+.+|+||...+. ...++.+.+.|++||.++.-.
T Consensus 221 ~~~~~~~-----~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 221 AKFMKEK-----VGGVHAAVVTAVS---KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHHHHHH-----HSSEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHH-----hCCCCEEEECCCC---HHHHHHHHHHhhcCCEEEEec
Confidence 2223222 1479999877653 345778889999999988643
No 319
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.18 E-value=0.005 Score=57.45 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=62.3
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
.+++|+.||+ |..++.+..+- -..+.++|+++..++..+.++.... ++|..+...
T Consensus 12 ~~~~dLFaG~---------------Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~ 66 (327)
T 2c7p_A 12 LRFIDLFAGL---------------GGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNE 66 (327)
T ss_dssp CEEEEETCTT---------------THHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCG
T ss_pred CcEEEECCCc---------------CHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCH
Confidence 4788888887 77777776642 3467899999999999888874311 577776533
Q ss_pred HHhhcCCCCceeEEEEcCC--------c-------c--chHHHHHHHHhcccCCeEEEEecc
Q 022597 201 ALILNGEASSYDFAFVDAE--------K-------R--MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~--------~-------~--~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.. -..+|+++.+++ + + -+.++++. .+.++|. ++++.||
T Consensus 67 ~~-----~~~~D~l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~-i~~~~P~-~~~~ENV 121 (327)
T 2c7p_A 67 KT-----IPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARI-VREKKPK-VVFMENV 121 (327)
T ss_dssp GG-----SCCCSEEEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHH-HHHHCCS-EEEEEEE
T ss_pred hh-----CCCCCEEEECCCCCCcchhcccCCCcchhhHHHHHHHHH-HHhccCc-EEEEeCc
Confidence 21 246999998754 1 1 13444443 3456885 7888998
No 320
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.18 E-value=0.013 Score=54.73 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=68.0
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH-- 192 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-- 192 (294)
...++++||-+|+|.+ |..++.+++.. ++ +|++++.+++..+.++ +.|...-+....
T Consensus 189 ~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~ 248 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAV--------------GLAAVMGCHSA--GAKRIIAVDLNPDKFEKAK----VFGATDFVNPNDHS 248 (374)
T ss_dssp CCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCSEEEEECSCGGGHHHHH----HTTCCEEECGGGCS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCEEEEEcCCHHHHHHHH----HhCCceEEeccccc
Confidence 3456679999998754 77888888876 45 8999999999887765 356532111100
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~v 245 (294)
.+..+.+.++. .+.+|+||...+. ...++.+.+.|++| |.++.-..
T Consensus 249 ~~~~~~~~~~~----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 249 EPISQVLSKMT----NGGVDFSLECVGN---VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SCHHHHHHHHH----TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hhHHHHHHHHh----CCCCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEEcC
Confidence 11222333321 2479999876643 34577889999999 99887543
No 321
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.17 E-value=0.021 Score=53.65 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=70.4
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
..+.++++||-+|+|.+ |..++.+++..+ ..+|+++|.+++.++.+++ .|.. .+.....+
T Consensus 181 ~~~~~g~~VlV~GaG~v--------------G~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~ 240 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPV--------------GLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGFE-IADLSLDT 240 (398)
T ss_dssp TTCCTTCEEEEECCSHH--------------HHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCE-EEETTSSS
T ss_pred cCCCCCCEEEEECCcHH--------------HHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcc
Confidence 45556789999998765 888888888863 2379999999998877754 5642 11111111
Q ss_pred -hhhhHHHHhhcCCCCceeEEEEcCCccc------------hHHHHHHHHhcccCCeEEEEecc
Q 022597 195 -AADSLKALILNGEASSYDFAFVDAEKRM------------YQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 -a~~~l~~l~~~~~~~~fD~vfiD~~~~~------------~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..+.+.++. ....+|+||-..+... ....++.+.+.|++||.+++-..
T Consensus 241 ~~~~~v~~~t---~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 241 PLHEQIAALL---GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp CHHHHHHHHH---SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred hHHHHHHHHh---CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 222333321 1247999987655321 23468888999999999987544
No 322
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.15 E-value=0.01 Score=55.37 Aligned_cols=104 Identities=16% Similarity=0.197 Sum_probs=68.0
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--c
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH--G 193 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~--g 193 (294)
.+.++++||-+|+|.+ |..++.+++... ..+|+++|.+++..+.++ +.|...-+.... .
T Consensus 188 ~~~~g~~VlV~GaG~v--------------G~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~ 248 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGV--------------GFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATECLNPKDYDK 248 (373)
T ss_dssp CCCTTCEEEEECCSHH--------------HHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSEEECGGGCSS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcEEEecccccc
Confidence 3446679999999765 888888888763 238999999999887765 456532111100 1
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEecc
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 245 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~v 245 (294)
+..+.+.++ . .+.+|+||--.+. ...++.+.+.|++| |.++.-..
T Consensus 249 ~~~~~i~~~---t-~gg~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 249 PIYEVICEK---T-NGGVDYAVECAGR---IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CHHHHHHHH---T-TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred hHHHHHHHH---h-CCCCCEEEECCCC---HHHHHHHHHHHhcCCCEEEEEcc
Confidence 122223332 1 2479999876543 35577889999999 99886543
No 323
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.10 E-value=0.0029 Score=57.69 Aligned_cols=95 Identities=16% Similarity=0.146 Sum_probs=59.7
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHH--CCC-CcEEEEEeC--ChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALV--LPE-SGCLVACER--DARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~--~~~-~~~v~~id~--~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
.++.+|||+||+. |.++...+.. ... .+.++++|+ .|-.. ...|+ +-++|+.
T Consensus 72 kpg~~VVDLGaAP---------------GGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv-~~i~~~~ 128 (269)
T 2px2_A 72 QPIGKVVDLGCGR---------------GGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGW-NIVTMKS 128 (269)
T ss_dssp CCCEEEEEETCTT---------------SHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTG-GGEEEEC
T ss_pred CCCCEEEEcCCCC---------------CHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCc-eEEEeec
Confidence 4567999999999 8888887775 221 356677773 22100 00121 1246666
Q ss_pred c-chhhhHHHHhhcCCCCceeEEEEcCCccc---------hHHHHHHHHhcccCCe-EEEEe
Q 022597 193 G-LAADSLKALILNGEASSYDFAFVDAEKRM---------YQEYFELLLQLIRVGG-IIVID 243 (294)
Q Consensus 193 g-da~~~l~~l~~~~~~~~fD~vfiD~~~~~---------~~~~~~~~~~lLkpgG-~ivid 243 (294)
| |..+. +..++|+|+.|..+.. ....++.+.+.|+||| .+++-
T Consensus 129 G~Df~~~--------~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 129 GVDVFYK--------PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp SCCGGGS--------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cCCccCC--------CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 7 88762 1458999999964211 1125777778999999 88873
No 324
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.03 E-value=0.0011 Score=61.02 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHH--hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHH
Q 022597 103 VSPDQAQLLAMLV--QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYE 180 (294)
Q Consensus 103 v~~~~~~lL~~l~--~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~ 180 (294)
.+...-+|+...- .+.+..+|||+||+. |..+...+...+ ...|+++|+.......+... +
T Consensus 72 rSRAAfKL~ei~eK~~Lk~~~~VLDLGaAP---------------GGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~ 134 (282)
T 3gcz_A 72 VSRGSAKLRWMEERGYVKPTGIVVDLGCGR---------------GGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-T 134 (282)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTT---------------CHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-C
T ss_pred ecHHHHHHHHHHHhcCCCCCCEEEEeCCCC---------------CHHHHHHHHhcC-CCeeeeEEeccCcccccccc-c
Confidence 4444444433332 234566999999999 888887776443 45788999876432211110 0
Q ss_pred HhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------ch--HHHHHHHHhcccCC--eEEEEe
Q 022597 181 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MY--QEYFELLLQLIRVG--GIIVID 243 (294)
Q Consensus 181 ~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------~~--~~~~~~~~~lLkpg--G~ivid 243 (294)
..|. +-+.+ ..+. +.. .+ ..+++|+|+.|..+. .+ ..+++.+.+.|+|| |.+|+-
T Consensus 135 ~~g~-~ii~~-~~~~-dv~-~l----~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 135 TLGW-NLIRF-KDKT-DVF-NM----EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp BTTG-GGEEE-ECSC-CGG-GS----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCCC-ceEEe-eCCc-chh-hc----CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 1111 12333 3222 111 11 257899999996522 11 23567777899999 999984
No 325
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.03 E-value=0.012 Score=54.30 Aligned_cols=100 Identities=12% Similarity=0.181 Sum_probs=65.5
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+..+++||-+|+ |.+ |..+..+++.. +++|++++.+++..+.+++ .|...-+... .+.
T Consensus 157 ~~~g~~VlV~Gasg~i--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~v~~~~-~~~ 215 (342)
T 4eye_A 157 LRAGETVLVLGAAGGI--------------GTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADIVLPLE-EGW 215 (342)
T ss_dssp CCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSEEEESS-TTH
T ss_pred CCCCCEEEEECCCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcEEecCc-hhH
Confidence 446779999997 432 77777788776 5799999999998877665 4543212111 222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.+... .....+|++|-..+.. .++.+.+.|++||.+++-.
T Consensus 216 ~~~v~~~---~~~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 216 AKAVREA---TGGAGVDMVVDPIGGP----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHHHHHH---TTTSCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred HHHHHHH---hCCCCceEEEECCchh----HHHHHHHhhcCCCEEEEEE
Confidence 2333332 1234799999776643 4677889999999998754
No 326
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.02 E-value=0.012 Score=54.70 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=66.0
Q ss_pred hhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+.++++||-+| +|.+ |..+..+++.. +++|++++.+++..+.+++ .|...-+.....+.
T Consensus 165 ~~~g~~VlV~Gg~g~i--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~ 224 (353)
T 4dup_A 165 LTEGESVLIHGGTSGI--------------GTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDF 224 (353)
T ss_dssp CCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCH
T ss_pred CCCCCEEEEEcCCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHH
Confidence 44667999995 4432 77777777765 5799999999998877764 45432111111222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.+.... ...+|++|...+.. .++.+.+.|++||.++.-..
T Consensus 225 ~~~~~~~~----~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 225 AAVIKAET----GQGVDIILDMIGAA----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHHHHHHH----SSCEEEEEESCCGG----GHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHh----CCCceEEEECCCHH----HHHHHHHHhccCCEEEEEEe
Confidence 23333332 35799999877643 46678899999999887543
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.00 E-value=0.01 Score=55.61 Aligned_cols=105 Identities=21% Similarity=0.232 Sum_probs=69.9
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEE--Ec
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK--HG 193 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~--~g 193 (294)
...++++||-+|+|.+ |..++.+++... ..+|+++|.+++.++.++ +.|..+-+... ..
T Consensus 190 ~~~~g~~VlV~GaG~v--------------G~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~ 250 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTV--------------GLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNEFVNPKDHDK 250 (378)
T ss_dssp CCCTTCCEEEECCSHH--------------HHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCEEECGGGCSS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcEEEccccCch
Confidence 3446679999999865 888888888763 238999999999887664 45654311111 11
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEeccc
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNVL 246 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~vl 246 (294)
+..+.+.++ . .+.+|+||--.+. ...++.+.+.|++| |.+++-...
T Consensus 251 ~~~~~i~~~---~-~gg~D~vid~~g~---~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 251 PIQEVIVDL---T-DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp CHHHHHHHH---T-TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred hHHHHHHHh---c-CCCCCEEEECCCC---HHHHHHHHHHhhccCCEEEEEccc
Confidence 222333333 1 3489999876653 35678889999997 999875543
No 328
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.96 E-value=0.013 Score=53.63 Aligned_cols=102 Identities=18% Similarity=0.220 Sum_probs=63.9
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE-cc
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-GL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-gd 194 (294)
....+++||-+|++.+. |.....+++.. +++|++++.+++..+.++ +.|....+.... .+
T Consensus 142 ~~~~g~~vlV~Ga~ggi-------------G~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~~~~d~~~~~~ 202 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAV-------------GSVVGQIAKLK--GCKVVGAAGSDEKIAYLK----QIGFDAAFNYKTVNS 202 (333)
T ss_dssp CCCSSCEEEEESTTBHH-------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSEEEETTSCSC
T ss_pred CCCCCCEEEEecCCCcH-------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCcEEEecCCHHH
Confidence 34566899999983211 66666666654 579999999998877663 335432111111 12
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
..+.+... . .+.+|.+|..++. ..++.+.+.|++||.+++-.
T Consensus 203 ~~~~~~~~---~-~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 203 LEEALKKA---S-PDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHHHHHH---C-TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHH---h-CCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 22223322 1 2579999987764 34778889999999998643
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.92 E-value=0.017 Score=53.82 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=67.4
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH-- 192 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-- 192 (294)
.+.++++||-+|+|.+ |..++.+++.. ++ +|++++.+++..+.++ +.|...-+....
T Consensus 188 ~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~ 247 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGV--------------GLSVIMGCKAA--GAARIIGVDINKDKFAKAK----EVGATECVNPQDYK 247 (374)
T ss_dssp CCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCSEEEEECSCGGGHHHHH----HTTCSEEECGGGCS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCeEEEEcCCHHHHHHHH----HhCCceEecccccc
Confidence 3446679999998764 77888888876 45 8999999999887764 456532111100
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~v 245 (294)
.+..+.+.++. .+.+|+||--.+. ...++.+.+.|++| |.++.-..
T Consensus 248 ~~~~~~~~~~~----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 248 KPIQEVLTEMS----NGGVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp SCHHHHHHHHT----TSCBSEEEECSCC---HHHHHHHHHHBCTTTCEEEECSC
T ss_pred hhHHHHHHHHh----CCCCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEecc
Confidence 11222233321 2479999876643 34577888999999 99987543
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.91 E-value=0.016 Score=53.92 Aligned_cols=103 Identities=16% Similarity=0.242 Sum_probs=67.7
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH-- 192 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-- 192 (294)
...++++||-+|+|.+ |..++.+++.. ++ +|++++.+++..+.+++ .|...-+....
T Consensus 187 ~~~~g~~VlV~GaG~v--------------G~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~ 246 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGV--------------GLAVIMGCKVA--GASRIIGVDINKDKFARAKE----FGATECINPQDFS 246 (373)
T ss_dssp CCCTTCEEEEECCSHH--------------HHHHHHHHHHH--TCSEEEEECSCGGGHHHHHH----HTCSEEECGGGCS
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH----cCCceEecccccc
Confidence 3445679999998764 88888888876 45 89999999998877653 46532111100
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCC-eEEEEecc
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 245 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpg-G~ivid~v 245 (294)
.+..+.+.++ . .+.+|+||--.+. ...++.+.+.|+++ |.++.-..
T Consensus 247 ~~~~~~v~~~---~-~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 247 KPIQEVLIEM---T-DGGVDYSFECIGN---VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SCHHHHHHHH---T-TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred ccHHHHHHHH---h-CCCCCEEEECCCc---HHHHHHHHHhhccCCcEEEEEec
Confidence 1122223332 1 2479999876643 34577889999999 99987543
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.90 E-value=0.018 Score=51.46 Aligned_cols=57 Identities=9% Similarity=0.212 Sum_probs=42.2
Q ss_pred HHHHHHhh--hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 022597 110 LLAMLVQI--LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV 184 (294)
Q Consensus 110 lL~~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl 184 (294)
++..++.. .++..|||..||+ |..+++.... +.+++++|++++.++.|+++++.+++
T Consensus 201 l~~~~i~~~~~~~~~vlD~f~Gs---------------Gtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 201 LIERIIRASSNPNDLVLDCFMGS---------------GTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHCCTTCEEEESSCTT---------------CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhCCCCCEEEECCCCC---------------CHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 34444433 3567899999998 8877776653 56999999999999999999987664
No 332
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.89 E-value=0.018 Score=54.03 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=67.4
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCC-cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc-
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPES-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL- 194 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~-~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd- 194 (294)
+.++++||-+|+|.+ |..++.+++.. + .+|++++.+++..+.++ +.|... ++..+
T Consensus 193 ~~~g~~VlV~GaG~v--------------G~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~----~lGa~~---vi~~~~ 249 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPL--------------GLFGVVIARSL--GAENVIVIAGSPNRLKLAE----EIGADL---TLNRRE 249 (380)
T ss_dssp CCBTCEEEEECCSHH--------------HHHHHHHHHHT--TBSEEEEEESCHHHHHHHH----HTTCSE---EEETTT
T ss_pred CCCCCEEEEECcCHH--------------HHHHHHHHHHc--CCceEEEEcCCHHHHHHHH----HcCCcE---EEeccc
Confidence 345679999998754 77888888876 4 59999999999887765 456532 22222
Q ss_pred --hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 --AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 --a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..+..+.+........+|+||-..+.. ..++.+.+.|++||.++.-..
T Consensus 250 ~~~~~~~~~v~~~~~g~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 250 TSVEERRKAIMDITHGRGADFILEATGDS---RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp SCHHHHHHHHHHHTTTSCEEEEEECSSCT---THHHHHHHHEEEEEEEEECCC
T ss_pred cCcchHHHHHHHHhCCCCCcEEEECCCCH---HHHHHHHHHHhcCCEEEEEec
Confidence 222222222211123699998766532 346778899999999987543
No 333
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.84 E-value=0.036 Score=51.71 Aligned_cols=98 Identities=17% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+++||-+| +|.+ |..++.+++.+. +.+|++++.+++..+.+++ .|... ++... .+
T Consensus 171 ~g~~VlV~Ga~G~v--------------G~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad~---vi~~~-~~ 227 (363)
T 4dvj_A 171 AAPAILIVGGAGGV--------------GSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAHH---VIDHS-KP 227 (363)
T ss_dssp SEEEEEEESTTSHH--------------HHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCSE---EECTT-SC
T ss_pred CCCEEEEECCCCHH--------------HHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCCE---EEeCC-CC
Confidence 456899998 6654 778888888643 6799999999998877654 56432 22111 12
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
..+.+... ..+.+|+||-..+. ...++.+.+.|++||.++.-
T Consensus 228 ~~~~v~~~-~~~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 228 LAAEVAAL-GLGAPAFVFSTTHT---DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHHHHTT-CSCCEEEEEECSCH---HHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHh-cCCCceEEEECCCc---hhhHHHHHHHhcCCCEEEEE
Confidence 22233222 24689999876543 35677889999999999864
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.79 E-value=0.028 Score=51.80 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=68.5
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.. ++++||-+|+|.+ |..++.+++...++.+|++++.+++..+.+++ .|... ++....
T Consensus 168 ~~-~g~~VlV~GaG~v--------------G~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~ 225 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGL--------------AVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY---VSEMKD 225 (344)
T ss_dssp TC-SSCEEEEECCSHH--------------HHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE---EECHHH
T ss_pred CC-CCCEEEEECCCHH--------------HHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE---Eecccc
Confidence 45 7789999999754 88888888876224789999999998877654 45432 221111
Q ss_pred -hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 -ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 -~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+....+.. ...+|+||-..+. ...++.+.+.|++||.++.-.
T Consensus 226 ~~~~~~~~~~---g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 226 AESLINKLTD---GLGASIAIDLVGT---EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HHHHHHHHHT---TCCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred chHHHHHhhc---CCCccEEEECCCC---hHHHHHHHHHhhcCCEEEEeC
Confidence 223333321 2379999876653 346778889999999998743
No 335
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.75 E-value=0.067 Score=49.98 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=67.1
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++++||-+|+|.+ |..++.+++.. +++|++++.+++..+.+++ .|... ++....
T Consensus 191 ~~~~g~~VlV~GaG~v--------------G~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~ 247 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGL--------------GHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGADE---VVNSRN 247 (369)
T ss_dssp TCCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE---EEETTC
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---Eecccc
Confidence 4456789999999764 88888888876 5789999999998877764 46432 222222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+..+.+ .+.+|+||.-.+... .++.+.+.|++||.++.-.
T Consensus 248 ~~~~~~~-----~~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 248 ADEMAAH-----LKSFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp HHHHHTT-----TTCEEEEEECCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHh-----hcCCCEEEECCCCHH---HHHHHHHHhccCCEEEEec
Confidence 2333322 257999987665432 3556789999999988643
No 336
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.014 Score=53.22 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=63.8
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+..+++||-+|+ |.+ |.....+++.. +++|++++.+++..+.+++ .|... ++....
T Consensus 138 ~~~g~~vlV~Ga~ggi--------------G~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~~---~~~~~~ 194 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGV--------------GLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAWQ---VINYRE 194 (327)
T ss_dssp CCTTCEEEESSTTBHH--------------HHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSE---EEETTT
T ss_pred CCCCCEEEEECCCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCE---EEECCC
Confidence 445679999994 322 66666666654 5799999999988877764 35432 222111
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+..+.+........+|.+|...+. ..++.+.+.|++||.++.-.
T Consensus 195 ~~~~~~~~~~~~~~~~D~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 195 EDLVERLKEITGGKKVRVVYDSVGR----DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp SCHHHHHHHHTTTCCEEEEEECSCG----GGHHHHHHTEEEEEEEEECC
T ss_pred ccHHHHHHHHhCCCCceEEEECCch----HHHHHHHHHhcCCCEEEEEe
Confidence 2222222221113469999987762 45677889999999988643
No 337
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.66 E-value=0.016 Score=53.17 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=65.4
Q ss_pred hhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE-c
Q 022597 116 QILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-G 193 (294)
Q Consensus 116 ~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-g 193 (294)
+..++++||-+|+ |.+ |.....+++.. +++|++++.+++..+.+++ +.|...-+.... .
T Consensus 152 ~~~~g~~vlI~Ga~g~i--------------G~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~~~d~~~~~ 212 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAV--------------GQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFDDAFNYKEES 212 (345)
T ss_dssp CCCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCSEEEETTSCS
T ss_pred CCCCCCEEEEECCCcHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCceEEecCCHH
Confidence 3446679999997 332 66666777765 5799999999988776652 235432111110 1
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..+.+.... .+.+|++|...+. ..++.+.+.|++||.+++-.
T Consensus 213 ~~~~~~~~~~----~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 213 DLTAALKRCF----PNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CSHHHHHHHC----TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHHHh----CCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEEc
Confidence 2223333321 2579999877753 36788899999999998743
No 338
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=95.64 E-value=0.043 Score=50.83 Aligned_cols=100 Identities=14% Similarity=0.045 Sum_probs=60.1
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc-chh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g-da~ 196 (294)
.++++|||+||++ |..+..++...+ ...|+++|+.......... .+..+. +-+.+..+ |..
T Consensus 80 ~~g~~vlDLGaaP---------------GgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~ 141 (300)
T 3eld_A 80 RITGRVLDLGCGR---------------GGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVF 141 (300)
T ss_dssp CCCEEEEEETCTT---------------CHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTT
T ss_pred CCCCEEEEcCCCC---------------CHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC-ceEEeecCceee
Confidence 3567999999999 888888886543 4578899986532100000 000010 12333322 221
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCcc-------ch--HHHHHHHHhcccCC-eEEEEe
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKR-------MY--QEYFELLLQLIRVG-GIIVID 243 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~-------~~--~~~~~~~~~lLkpg-G~ivid 243 (294)
+ + ..+++|+|+.|..+. .+ ..+++.+.+.|+|| |.+|+-
T Consensus 142 ~----l----~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 142 T----M----PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp T----S----CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred e----c----CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 1 1 257899999996532 11 34477778999999 999986
No 339
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.60 E-value=0.026 Score=52.74 Aligned_cols=75 Identities=13% Similarity=0.053 Sum_probs=51.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
.+++|+.||. |..++.+..+--.-..|.++|.++..++..+.|+.. ..++.+|..+...
T Consensus 3 ~~v~dLFaG~---------------Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~ 61 (343)
T 1g55_A 3 LRVLELYSGV---------------GGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITL 61 (343)
T ss_dssp EEEEEETCTT---------------CHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCH
T ss_pred CeEEEeCcCc---------------cHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccH
Confidence 3678888877 777777776521113789999999999988888742 3467788877643
Q ss_pred HHhhcCCCCceeEEEEcCC
Q 022597 201 ALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~ 219 (294)
.... ...+|+++.+++
T Consensus 62 ~~~~---~~~~D~l~~gpP 77 (343)
T 1g55_A 62 EEFD---RLSFDMILMSPP 77 (343)
T ss_dssp HHHH---HHCCSEEEECCC
T ss_pred hHcC---cCCcCEEEEcCC
Confidence 2111 126999998876
No 340
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.60 E-value=0.045 Score=50.46 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=64.9
Q ss_pred CCCeEEEE-ccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEV-GVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEi-G~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
++++||-+ |+|.+ |..++.+++.. +++|++++.+++..+.+++ .|...-+.. ..+..+
T Consensus 150 ~g~~VlV~gg~G~v--------------G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~-~~~~~~ 208 (346)
T 3fbg_A 150 EGKTLLIINGAGGV--------------GSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADIVLNH-KESLLN 208 (346)
T ss_dssp TTCEEEEESTTSHH--------------HHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSEEECT-TSCHHH
T ss_pred CCCEEEEEcCCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcEEEEC-CccHHH
Confidence 67799999 56654 77777888876 5799999999998877765 454321111 112223
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.+.++ ....+|+||...+. ...++.+.+.|++||.++.
T Consensus 209 ~~~~~----~~~g~Dvv~d~~g~---~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 209 QFKTQ----GIELVDYVFCTFNT---DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHH----TCCCEEEEEESSCH---HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHh----CCCCccEEEECCCc---hHHHHHHHHHhccCCEEEE
Confidence 33332 14579999876653 3567788899999999975
No 341
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.59 E-value=0.0097 Score=54.80 Aligned_cols=104 Identities=13% Similarity=0.044 Sum_probs=65.7
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++++||-+|+|.+. |..+..+++.. +++|++++.+++..+.+++ .|... ++....
T Consensus 141 ~~~~g~~VlV~Ga~g~i-------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~---~~~~~~ 198 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAI-------------GHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAY---VIDTST 198 (340)
T ss_dssp CCCTTCEEEESSTTSHH-------------HHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSE---EEETTT
T ss_pred ccCCCCEEEEeCCccHH-------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcE---EEeCCc
Confidence 44567899999987411 66666677765 5799999999998877765 45432 222211
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+..+.+........+|++|-..+.... ....+.|++||.++.-..
T Consensus 199 ~~~~~~~~~~~~~~g~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 199 APLYETVMELTNGIGADAAIDSIGGPDG----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SCHHHHHHHHTTTSCEEEEEESSCHHHH----HHHHHTEEEEEEEEECCC
T ss_pred ccHHHHHHHHhCCCCCcEEEECCCChhH----HHHHHHhcCCCEEEEEee
Confidence 2222222222223579999987764332 234489999999987654
No 342
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.59 E-value=0.072 Score=50.70 Aligned_cols=24 Identities=13% Similarity=0.265 Sum_probs=18.9
Q ss_pred chHHHHHHHHhcccCCeEEEEecc
Q 022597 222 MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 222 ~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
++..+++...+.|+|||.+++.-.
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEe
Confidence 345567777899999999998655
No 343
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.58 E-value=0.056 Score=50.25 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=72.8
Q ss_pred CCCHHHHHHHHHHHh--hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLVQ--ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 102 ~v~~~~~~lL~~l~~--~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
-++....+|....-+ +.+..+|||+||++ |..+...+...+ ..+|+++|+-..-.+.- ..+
T Consensus 75 y~SR~~~KL~ei~~~~~l~~~~~VlDLGaap---------------GGwsq~~~~~~g-v~~V~avdvG~~~he~P-~~~ 137 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERRFLEPVGKVIDLGCGR---------------GGWCYYMATQKR-VQEVRGYTKGGPGHEEP-QLV 137 (321)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEETCTT---------------CHHHHHHTTCTT-EEEEEEECCCSTTSCCC-CCC
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEeCCCC---------------CcHHHHHHhhcC-CCEEEEEEcCCCCccCc-chh
Confidence 356665555554432 34556999999999 777776665433 35799999976521100 000
Q ss_pred HHhCCCCcEEEEEc-chhhhHHHHhhcCCCCceeEEEEcCCcc---------chHHHHHHHHhcccCC-eEEEEeccc
Q 022597 180 ERAGVSHKVKIKHG-LAADSLKALILNGEASSYDFAFVDAEKR---------MYQEYFELLLQLIRVG-GIIVIDNVL 246 (294)
Q Consensus 180 ~~~gl~~~v~~~~g-da~~~l~~l~~~~~~~~fD~vfiD~~~~---------~~~~~~~~~~~lLkpg-G~ivid~vl 246 (294)
++.|. .-|+++.+ |..... ..++|+|++|.+.. .....++.+.+.|++| |-+++ -||
T Consensus 138 ~ql~w-~lV~~~~~~Dv~~l~--------~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl 205 (321)
T 3lkz_A 138 QSYGW-NIVTMKSGVDVFYRP--------SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVL 205 (321)
T ss_dssp CBTTG-GGEEEECSCCTTSSC--------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EES
T ss_pred hhcCC-cceEEEeccCHhhCC--------CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEc
Confidence 12222 23888887 764331 36799999997621 1234677777889988 88887 444
No 344
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.53 E-value=0.047 Score=50.33 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=67.0
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.++ +.|... ++ .+.
T Consensus 173 ~~~~g~~VlV~GaG~v--------------G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~~---v~-~~~ 228 (348)
T 3two_A 173 KVTKGTKVGVAGFGGL--------------GSMAVKYAVAM--GAEVSVFARNEHKKQDAL----SMGVKH---FY-TDP 228 (348)
T ss_dssp TCCTTCEEEEESCSHH--------------HHHHHHHHHHT--TCEEEEECSSSTTHHHHH----HTTCSE---EE-SSG
T ss_pred CCCCCCEEEEECCcHH--------------HHHHHHHHHHC--CCeEEEEeCCHHHHHHHH----hcCCCe---ec-CCH
Confidence 4556789999999765 88888888876 479999999999887665 456442 22 333
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+. ...+|+||-..+.. ..++.+.+.|++||.++.-..
T Consensus 229 ~~~---------~~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 229 KQC---------KEELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp GGC---------CSCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCC
T ss_pred HHH---------hcCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECC
Confidence 211 23799998766543 235678899999999987543
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.52 E-value=0.028 Score=51.86 Aligned_cols=100 Identities=15% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
++++||-+|+|.+ |..++.+++.. +. +|++++.+++..+.+++ .|...-+.....+..+
T Consensus 167 ~g~~VlV~GaG~v--------------G~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~ 226 (348)
T 2d8a_A 167 SGKSVLITGAGPL--------------GLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGADYVINPFEEDVVK 226 (348)
T ss_dssp TTCCEEEECCSHH--------------HHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCSEEECTTTSCHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCCEEECCCCcCHHH
Confidence 5679999999754 77888888876 45 89999999988877653 4543211111112222
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.++ .....+|+||...+. ...++.+.+.|++||.++.-.
T Consensus 227 ~v~~~---~~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 227 EVMDI---TDGNGVDVFLEFSGA---PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHHHH---TTTSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHH---cCCCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEc
Confidence 23322 112469999876653 355777889999999988643
No 346
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.47 E-value=0.018 Score=52.81 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=64.3
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+.++++||-+|+ |.+ |.....+++.. +++|++++.+++..+.+++ .|...-+.....+.
T Consensus 143 ~~~g~~vlV~Ga~ggi--------------G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~ 202 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGM--------------GHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDF 202 (333)
T ss_dssp CCTTCEEEETTTTSTT--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCH
T ss_pred CCCCCEEEEECCccHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHH
Confidence 345679999995 322 77777777765 5799999999988877654 35432111111122
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.+.+.. ....+|++|...+. ..++.+.+.|++||.++.-.
T Consensus 203 ~~~i~~~~---~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 203 AEVVREIT---GGKGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HHHHHHHH---TTCCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHh---CCCCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 22222221 13469999977654 45677889999999988643
No 347
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.47 E-value=0.044 Score=50.45 Aligned_cols=104 Identities=9% Similarity=0.048 Sum_probs=65.1
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEE-Ecc
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~-~gd 194 (294)
...++++||-+|++.+. |.....+++.. +.+|++++.+++..+.+++ .|....+.+. ..+
T Consensus 166 ~~~~g~~vlV~Ga~ggi-------------G~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~ 226 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGL-------------GSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGEVFIDFTKEKD 226 (347)
T ss_dssp TCCTTCEEEEETTTSHH-------------HHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCCEEEETTTCSC
T ss_pred CCCCCCEEEEECCCchH-------------HHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCceEEecCccHh
Confidence 34566799999983211 66666666665 5799999999987766543 4543211111 112
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..+.+.... .+.+|++|...+. ...++.+.+.|++||.++.-..
T Consensus 227 ~~~~~~~~~----~~~~D~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 227 IVGAVLKAT----DGGAHGVINVSVS---EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHHHHHHH----TSCEEEEEECSSC---HHHHHHHTTSEEEEEEEEECCC
T ss_pred HHHHHHHHh----CCCCCEEEECCCc---HHHHHHHHHHHhcCCEEEEEeC
Confidence 222333321 2379999977653 3567788999999999986543
No 348
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.44 E-value=0.034 Score=51.31 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=64.1
Q ss_pred hhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+.++++||-+| +|.+ |..++.+++.. +++|+++ .+++.++.++ +.|... +. ...+.
T Consensus 148 ~~~g~~VlV~Ga~g~i--------------G~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~----~lGa~~-i~-~~~~~ 204 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGV--------------GHVAIQIALAR--GARVFAT-ARGSDLEYVR----DLGATP-ID-ASREP 204 (343)
T ss_dssp CCTTCEEEEETTTSHH--------------HHHHHHHHHHT--TCEEEEE-ECHHHHHHHH----HHTSEE-EE-TTSCH
T ss_pred CCCCCEEEEecCCCHH--------------HHHHHHHHHHC--CCEEEEE-eCHHHHHHHH----HcCCCE-ec-cCCCH
Confidence 44667999999 4543 77777788776 5799999 8888776654 456543 33 11222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+.+.... ....+|+||-..+. ..++.+.+.|+++|.++.-
T Consensus 205 ~~~~~~~~---~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 205 EDYAAEHT---AGQGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHHHHHH---TTSCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHh---cCCCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 23333221 13579999877653 4677888999999999874
No 349
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.42 E-value=0.011 Score=52.72 Aligned_cols=53 Identities=19% Similarity=0.184 Sum_probs=40.8
Q ss_pred cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--c---------------chHHHHHHHHhcccCCeEEEEe
Q 022597 187 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--R---------------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 187 ~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~---------------~~~~~~~~~~~lLkpgG~ivid 243 (294)
..++++||+.+.++.+. .++||+||+|++- . .....++.+.++|+|||.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSC----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhcc----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 34688999999887763 4689999999872 1 2345667778899999999875
No 350
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.40 E-value=0.034 Score=51.48 Aligned_cols=101 Identities=12% Similarity=0.105 Sum_probs=65.8
Q ss_pred HhhhCC------CeEEEEccccccccccccccccCCCcHHH-HHHH-HHCCCCcE-EEEEeCChH---HHHHHHHHHHHh
Q 022597 115 VQILGA------QRCIEVGVYTVCVSSYSTSILSLFSGYSS-LAIA-LVLPESGC-LVACERDAR---SLEVAKKYYERA 182 (294)
Q Consensus 115 ~~~~~~------~~vLEiG~g~~~~~~~~~~~~~~~aG~~s-l~la-~~~~~~~~-v~~id~~~~---~~~~A~~~~~~~ 182 (294)
..+.++ ++||-+|+|.+ |..+ +.++ +.. +.+ |++++.+++ ..+.++ +.
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~v--------------G~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~----~l 221 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSL--------------GLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIE----EL 221 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHH--------------HHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHH----HT
T ss_pred cCCCCCcccCCCCEEEEECCCHH--------------HHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHH----Hc
Confidence 455566 89999999654 6666 7777 654 455 999999988 777664 45
Q ss_pred CCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 183 GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 183 gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
|.. .+.....+..+ +.++ .+.+|+||-..+. ...++.+.+.|++||.++.-..
T Consensus 222 Ga~-~v~~~~~~~~~-i~~~-----~gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 222 DAT-YVDSRQTPVED-VPDV-----YEQMDFIYEATGF---PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp TCE-EEETTTSCGGG-HHHH-----SCCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCc-ccCCCccCHHH-HHHh-----CCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEEeC
Confidence 542 12111122333 4333 1379999876653 2457788899999999987543
No 351
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.36 E-value=0.04 Score=50.72 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=61.9
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcE-EEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~-v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+++|+-||. |..++.+..+-- ... |.++|+++...+..+.++. ...+..+|..++..
T Consensus 18 ~vidLFaG~---------------GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~ 75 (295)
T 2qrv_A 18 RVLSLFDGI---------------ATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQ 75 (295)
T ss_dssp EEEEETCTT---------------THHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCH
T ss_pred EEEEeCcCc---------------cHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccH
Confidence 677777776 666666665421 122 6899999998877666542 24677899887643
Q ss_pred HHhhcCCCCceeEEEEcCC---------cc---------chHHHHHHHHhcccCCe------EEEEeccc
Q 022597 201 ALILNGEASSYDFAFVDAE---------KR---------MYQEYFELLLQLIRVGG------IIVIDNVL 246 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~---------~~---------~~~~~~~~~~~lLkpgG------~ivid~vl 246 (294)
.-... .+.+|+++..++ ++ -+.++++ +.+.++|.. ++++.||-
T Consensus 76 ~~i~~--~~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~r-ii~~~~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 76 KHIQE--WGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYR-LLHDARPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp HHHHH--TCCCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHH-HHHHHSCCTTCCCCCEEEEEEES
T ss_pred HHhcc--cCCcCEEEecCCCccccccCccccccccccchhHHHHHH-HHHHhCcccccCCccEEEEEcCc
Confidence 32211 247999987643 11 1333333 335567762 89999993
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.36 E-value=0.02 Score=52.79 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=64.9
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+..+++||-+|+ |.+ |...+.+++.. +.+|++++.+++..+.+++ .|... ++....
T Consensus 164 ~~~g~~vlV~Gasg~i--------------G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~~---~~d~~~ 220 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGV--------------SVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGADE---TVNYTH 220 (343)
T ss_dssp CCTTCEEEECSTTSTT--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSE---EEETTS
T ss_pred CCCCCEEEEECCCchH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCE---EEcCCc
Confidence 345679999998 332 77777777775 5799999999998887754 35432 222111
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+..+.+........+|++|...+. ..++.+.+.|+++|.++.-.
T Consensus 221 ~~~~~~~~~~~~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 221 PDWPKEVRRLTGGKGADKVVDHTGA----LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTHHHHHHHHTTTTCEEEEEESSCS----SSHHHHHHHEEEEEEEEESS
T ss_pred ccHHHHHHHHhCCCCceEEEECCCH----HHHHHHHHhhccCCEEEEEe
Confidence 1222222211112479999987762 24667788999999988643
No 353
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.26 E-value=0.068 Score=50.73 Aligned_cols=99 Identities=13% Similarity=0.055 Sum_probs=63.6
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 201 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~ 201 (294)
+++|+.||. |..++.+..+- -..+.++|+++..++..+.|+. ...++.+|..+....
T Consensus 4 ~vidLFsG~---------------GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~ 60 (376)
T 3g7u_A 4 NVIDLFSGV---------------GGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAE 60 (376)
T ss_dssp EEEEETCTT---------------SHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHH
T ss_pred eEEEEccCc---------------CHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHH
Confidence 677777777 76777766652 2456799999999888777653 357788888775322
Q ss_pred -Hhh-cCCCCceeEEEEcCCcc----------------chHHHHHHHHhcccCCeEEEEecc
Q 022597 202 -LIL-NGEASSYDFAFVDAEKR----------------MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 202 -l~~-~~~~~~fD~vfiD~~~~----------------~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+.. ......+|+|+.+++.. -+.++++ +...++|. ++++.||
T Consensus 61 ~~~~~~~~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~-~v~~~~P~-~~v~ENV 120 (376)
T 3g7u_A 61 IIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYR-LVSELQPL-FFLAENV 120 (376)
T ss_dssp HHHHHHCSCCCCCEEEECCCCCTTC-------CHHHHHHHHHHHH-HHHHHCCS-EEEEEEC
T ss_pred HHHhhcccCCCeeEEEecCCCCCcccccCCCCCCchHHHHHHHHH-HHHHhCCC-EEEEecc
Confidence 211 00136799999987611 1233333 33556785 7788888
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.25 E-value=0.038 Score=50.91 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=65.6
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++++||-+|+|.+. |..+..+++... +.+|++++.+++..+.+++ .|...-+.....+.
T Consensus 167 ~~~~g~~vlV~Gagg~i-------------G~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~ 228 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGL-------------GTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGADYVINASMQDP 228 (347)
T ss_dssp TCCTTCEEEEETTTSHH-------------HHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCH
T ss_pred CCCCCCEEEEECCCccH-------------HHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCCEEecCCCccH
Confidence 44567899999998421 556666666541 4789999999998877654 35432111111111
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+.+..+. ..+.+|++|...+. ...++.+.+.|++||.++.-.
T Consensus 229 ~~~~~~~~---~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 229 LAEIRRIT---ESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HHHHHHHT---TTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECC
T ss_pred HHHHHHHh---cCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEEC
Confidence 12233331 11579999977753 345777889999999998743
No 355
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.16 E-value=0.2 Score=45.33 Aligned_cols=117 Identities=17% Similarity=0.113 Sum_probs=73.8
Q ss_pred CCCHHHHHHHHHHH--hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHH
Q 022597 102 QVSPDQAQLLAMLV--QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYY 179 (294)
Q Consensus 102 ~v~~~~~~lL~~l~--~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~ 179 (294)
-.+....+|....- .+.+..+|+|+||++ |..+...+...+ ..+|+++|+-..-.+.- ..+
T Consensus 59 yrSRa~~KL~ei~ek~~l~~g~~VvDLGaap---------------GGWSq~~a~~~g-~~~V~avdvG~~ghe~P-~~~ 121 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERNMVIPEGRVIDLGCGR---------------GGWSYYCAGLKK-VTEVRGYTKGGPGHEEP-VPM 121 (267)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEESCTT---------------SHHHHHHHTSTT-EEEEEEECCCSTTSCCC-CCC
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEcCCCC---------------CcHHHHHHHhcC-CCEEEEEecCCCCccCc-chh
Confidence 35555555544433 244567999999999 877776666543 45899999976533100 011
Q ss_pred HHhCCCCcEEEEEc-chhhhHHHHhhcCCCCceeEEEEcCCcc---------chHHHHHHHHhcccCCeEEEEeccc
Q 022597 180 ERAGVSHKVKIKHG-LAADSLKALILNGEASSYDFAFVDAEKR---------MYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 180 ~~~gl~~~v~~~~g-da~~~l~~l~~~~~~~~fD~vfiD~~~~---------~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
+..|. +.|+|+.+ |.... +..++|.|+.|-... .....++.+.+.|++ |-+++ -||
T Consensus 122 ~s~gw-n~v~fk~gvDv~~~--------~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~-KVl 187 (267)
T 3p8z_A 122 STYGW-NIVKLMSGKDVFYL--------PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI-KVL 187 (267)
T ss_dssp CCTTT-TSEEEECSCCGGGC--------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE-EES
T ss_pred hhcCc-CceEEEeccceeec--------CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE-EEc
Confidence 23344 36999998 86332 147899999996521 123467777788998 66766 444
No 356
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.10 E-value=0.017 Score=53.44 Aligned_cols=54 Identities=11% Similarity=0.226 Sum_probs=41.9
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--c---------------chHHHHHHHHhcccCCeEEEEe
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--R---------------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~---------------~~~~~~~~~~~lLkpgG~ivid 243 (294)
++.++++||+.+.++.+. .++||+||.|++- . ...+.++.+.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~----~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP----EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSC----SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC----CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 468999999988766442 5789999999872 1 2456677778999999998873
No 357
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.00 E-value=0.043 Score=50.69 Aligned_cols=103 Identities=12% Similarity=0.108 Sum_probs=64.5
Q ss_pred hhhCC--CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 116 QILGA--QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 116 ~~~~~--~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
....+ ++||-.|++.+. |.....+++.. ++ +|++++.+++..+.+++ ..|... ++.
T Consensus 155 ~~~~g~~~~vlI~Gasggi-------------G~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~---~~g~~~---~~d 213 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGAC-------------GSVAGQIGHFL--GCSRVVGICGTHEKCILLTS---ELGFDA---AIN 213 (357)
T ss_dssp CCCTTSCCEEEESSTTBHH-------------HHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH---TSCCSE---EEE
T ss_pred CCCCCCccEEEEECCCcHH-------------HHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHH---HcCCce---EEe
Confidence 44566 899999983211 66666666664 56 99999999887766543 245432 221
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
....+..+.+.... .+.+|++|...+. ..++.+.+.|++||.++.-.
T Consensus 214 ~~~~~~~~~~~~~~-~~~~d~vi~~~G~----~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 214 YKKDNVAEQLRESC-PAGVDVYFDNVGG----NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TTTSCHHHHHHHHC-TTCEEEEEESCCH----HHHHHHHHTEEEEEEEEECC
T ss_pred cCchHHHHHHHHhc-CCCCCEEEECCCH----HHHHHHHHHhccCcEEEEEC
Confidence 11112222222111 2379999987763 56788899999999998743
No 358
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.88 E-value=0.043 Score=52.72 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=66.9
Q ss_pred hhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 116 QILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
.+.++++||-+|+ |.+ |..++.+++.. ++++++++.+++.++.+++ .|...-+.....|
T Consensus 225 ~~~~g~~VlV~GasG~v--------------G~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d 284 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGL--------------GSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEG 284 (456)
T ss_dssp CCCTTCEEEETTTTSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTT
T ss_pred CCCCCCEEEEECCCCHH--------------HHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCc
Confidence 3456679999997 543 77888888876 5799999999988877654 5653212111111
Q ss_pred h-----------------hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 195 A-----------------ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a-----------------~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. .+.+.++. ....+|+||-..+. +.++.+.++|++||.+++-.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~i~~~t---~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 285 YRFWKDENTQDPKEWKRFGKRIRELT---GGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp CCSEEETTEECHHHHHHHHHHHHHHH---TSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEESC
T ss_pred ccccccccccchHHHHHHHHHHHHHh---CCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEEe
Confidence 1 02222221 13589999876653 46778889999999998754
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.88 E-value=0.062 Score=49.79 Aligned_cols=100 Identities=22% Similarity=0.212 Sum_probs=66.6
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.+.++++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.+++ .|... ++....
T Consensus 176 ~~~~g~~VlV~GaG~v--------------G~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---v~~~~~ 232 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGI--------------GSMGTLISKAM--GAETYVISRSSRKREDAMK----MGADH---YIATLE 232 (360)
T ss_dssp TCSTTCEEEEECCSHH--------------HHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSE---EEEGGG
T ss_pred CCCCCCEEEEECCCHH--------------HHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCCE---EEcCcC
Confidence 4556789999999754 88888888876 4789999999988877654 45432 222222
Q ss_pred h-hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 196 A-DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 196 ~-~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. +..+.+ .+.+|+||...+.. ....++.+.+.|++||.++.-.
T Consensus 233 ~~~~~~~~-----~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 233 EGDWGEKY-----FDTFDLIVVCASSL-TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp TSCHHHHS-----CSCEEEEEECCSCS-TTCCTTTGGGGEEEEEEEEECC
T ss_pred chHHHHHh-----hcCCCEEEECCCCC-cHHHHHHHHHHhcCCCEEEEec
Confidence 2 333333 25799998766530 0123456788999999988643
No 360
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.83 E-value=0.029 Score=51.32 Aligned_cols=92 Identities=20% Similarity=0.229 Sum_probs=54.3
Q ss_pred cccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC
Q 022597 140 ILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 140 ~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~ 219 (294)
|+|||||.+++.++.....--.+.++|+++...+.-+.++. -+++.+|..++-..- -...|+++..++
T Consensus 3 vidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~-----~~~~D~l~ggpP 70 (331)
T 3ubt_Y 3 LISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE-----FPKCDGIIGGPP 70 (331)
T ss_dssp EEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG-----SCCCSEEECCCC
T ss_pred EEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh-----CCcccEEEecCC
Confidence 34455555555444433212356799999998877766642 257789987653221 256898875433
Q ss_pred --------c-------c--chHHHHHHHHhcccCCeEEEEecc
Q 022597 220 --------K-------R--MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 220 --------~-------~--~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+ + -+.++++ +.+.++|. ++++.||
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L~~~~~r-~i~~~~Pk-~~~~ENV 111 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKLFYEYIR-ILKQKKPI-FFLAENV 111 (331)
T ss_dssp GGGTEETTEECCTTCGGGHHHHHHHH-HHHHHCCS-EEEEEEC
T ss_pred CCCcCCCCCccCCCCchhHHHHHHHH-HHhccCCe-EEEeeee
Confidence 1 1 1333333 34557886 7889999
No 361
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.81 E-value=0.12 Score=46.58 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=63.4
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++||-+|+ |.+ |..++.+++.. +++|++++.+++..+.+++ .|... ++....
T Consensus 123 ~~~g~~vlV~Ga~G~v--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~---~~~~~~ 179 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGAL--------------GTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAEE---AATYAE 179 (302)
T ss_dssp CCTTCEEEESSTTBHH--------------HHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCSE---EEEGGG
T ss_pred CCCCCEEEEECCCcHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCE---EEECCc
Confidence 446679999998 432 77777778776 5799999999988776643 45432 222111
Q ss_pred -hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 -ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 -~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+..+.+ +.+|++|. .+. ..++.+.+.|+++|.++.-
T Consensus 180 ~~~~~~~~------~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 180 VPERAKAW------GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp HHHHHHHT------TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC
T ss_pred chhHHHHh------cCceEEEE-CCH----HHHHHHHHhhccCCEEEEE
Confidence 2232322 57999998 764 3567788999999998864
No 362
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.81 E-value=0.042 Score=50.96 Aligned_cols=102 Identities=10% Similarity=0.113 Sum_probs=63.7
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.++++||-+|+..+. |.....+++.. +++|++++.+++..+.++ +.|... ++..+..
T Consensus 168 ~~~g~~vlV~Gasggi-------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~---~~d~~~~ 225 (351)
T 1yb5_A 168 VKAGESVLVHGASGGV-------------GLAACQIARAY--GLKILGTAGTEEGQKIVL----QNGAHE---VFNHREV 225 (351)
T ss_dssp CCTTCEEEEETCSSHH-------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCSE---EEETTST
T ss_pred CCCcCEEEEECCCChH-------------HHHHHHHHHHC--CCEEEEEeCChhHHHHHH----HcCCCE---EEeCCCc
Confidence 4466799999973211 66666677765 579999999998877554 345432 2221112
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+..+.+........+|++|...+. ..++.+.+.|++||.++.-.
T Consensus 226 ~~~~~~~~~~~~~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 226 NYIDKIKKYVGEKGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp THHHHHHHHHCTTCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred hHHHHHHHHcCCCCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 222222211113479999877653 34677889999999998743
No 363
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.75 E-value=0.03 Score=52.02 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=41.3
Q ss_pred CcEEEE-EcchhhhHHHHhhcCCCCceeEEEEcCCcc--------------chHHHHHHHHhcccCCeEEEEe
Q 022597 186 HKVKIK-HGLAADSLKALILNGEASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 186 ~~v~~~-~gda~~~l~~l~~~~~~~~fD~vfiD~~~~--------------~~~~~~~~~~~lLkpgG~ivid 243 (294)
...+++ +||+.+.++.+. .+++|+||+|++-. ...+.++.+.++|+|||.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 346788 999998887652 56899999998721 1345666778899999999885
No 364
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.75 E-value=0.11 Score=49.61 Aligned_cols=105 Identities=7% Similarity=0.021 Sum_probs=63.1
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHH-------------C---CCCcEEEEEeCC-----------hHHH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALV-------------L---PESGCLVACERD-----------ARSL 172 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~-------------~---~~~~~v~~id~~-----------~~~~ 172 (294)
+-+|+|+||++ |..|+.+... . ++.-+|+..|+- +...
T Consensus 53 ~~~IaDlGCss---------------G~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~ 117 (384)
T 2efj_A 53 CFKVGDLGCAS---------------GPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFY 117 (384)
T ss_dssp EEEEEEETCCS---------------SHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred ceEEEecCCCC---------------CchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhH
Confidence 35899999999 9999987766 1 234677888876 4433
Q ss_pred HHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC-------c-c-----------------------
Q 022597 173 EVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-------K-R----------------------- 221 (294)
Q Consensus 173 ~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~-------~-~----------------------- 221 (294)
+.+ -+..|...+-.+..|........+. +.+++|+||.... + .
T Consensus 118 ~~~---~~~~g~~~~~~f~~gvpgSFy~rlf---p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~ 191 (384)
T 2efj_A 118 RNL---EKENGRKIGSCLIGAMPGSFYSRLF---PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPP 191 (384)
T ss_dssp HHH---HHHTCCCTTSEEEEECCSCTTSCCS---CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHH
T ss_pred hhh---hhhccCCCCceEEEecchhhhhccC---CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHH
Confidence 322 1223322233555555433222211 2689999986521 0 0
Q ss_pred -----------chHHHHHHHHhcccCCeEEEEecc
Q 022597 222 -----------MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 222 -----------~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
++..+++...+.|+|||.+++.-.
T Consensus 192 v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 192 IQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFI 226 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEe
Confidence 122336666789999999998765
No 365
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.69 E-value=0.51 Score=43.48 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC--CCCcEEEEEcchh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--VSHKVKIKHGLAA 196 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g--l~~~v~~~~gda~ 196 (294)
+...||++||| .-+.+.-...+++.+++=+| .|+.++..++.+++.| ...+.+++..|..
T Consensus 102 g~~QvV~LGaG-----------------lDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~ 163 (310)
T 2uyo_A 102 GIRQFVILASG-----------------LDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLR 163 (310)
T ss_dssp TCCEEEEETCT-----------------TCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTT
T ss_pred CCCeEEEeCCC-----------------CCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchH
Confidence 45679999995 44443333224457899999 6999999999998765 3567899999987
Q ss_pred h-hHHHHhhcC-CCCceeEEEEcC-----CccchHHHHHHHHhcccCCeEEEEeccc
Q 022597 197 D-SLKALILNG-EASSYDFAFVDA-----EKRMYQEYFELLLQLIRVGGIIVIDNVL 246 (294)
Q Consensus 197 ~-~l~~l~~~~-~~~~fD~vfiD~-----~~~~~~~~~~~~~~lLkpgG~ivid~vl 246 (294)
+ ++..+...+ ..+..=+++.-+ .......+++.+...+.||+.++++.+.
T Consensus 164 d~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 164 QDWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred hhHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 6 333443322 112222232222 2345567888888888999999999874
No 366
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.54 E-value=0.086 Score=48.52 Aligned_cols=87 Identities=10% Similarity=0.028 Sum_probs=55.1
Q ss_pred cHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHH
Q 022597 146 GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQE 225 (294)
Q Consensus 146 G~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~ 225 (294)
|..++.+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+.++.. ...+|+||-..+..
T Consensus 178 G~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~---~~g~D~vid~~g~~---- 244 (349)
T 3pi7_A 178 CKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK---AEQPRIFLDAVTGP---- 244 (349)
T ss_dssp HHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH---HHCCCEEEESSCHH----
T ss_pred HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc---CCCCcEEEECCCCh----
Confidence 66777777776 5799999999998877753 45432122111223333333211 24699998766543
Q ss_pred HHHHHHhcccCCeEEEEecc
Q 022597 226 YFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 226 ~~~~~~~lLkpgG~ivid~v 245 (294)
.++.+.+.|++||.++.-..
T Consensus 245 ~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 245 LASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp HHHHHHHHSCTTCEEEECCC
T ss_pred hHHHHHhhhcCCCEEEEEec
Confidence 34678899999999987543
No 367
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.53 E-value=0.093 Score=50.04 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=66.2
Q ss_pred hhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 116 QILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
.+.++++||-+|+ |.+ |..++.+++.. ++++++++.+++..+.++ +.|...-+.....+
T Consensus 217 ~~~~g~~VlV~GasG~i--------------G~~a~qla~~~--Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~ 276 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGL--------------GSYAIQFVKNG--GGIPVAVVSSAQKEAAVR----ALGCDLVINRAELG 276 (447)
T ss_dssp CCCTTCEEEETTTTSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHT
T ss_pred CCCCCCEEEEECCCCHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----hcCCCEEEeccccc
Confidence 3456679999997 543 77777777775 579999999998887664 45654322211111
Q ss_pred h---------------hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 195 A---------------ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a---------------~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
. .+....+.... ...+|++|-..+. ..++.+.+.|++||.++.-.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 277 ITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp CCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred ccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 1 00011111111 3579999877764 35778889999999998754
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.40 E-value=0.075 Score=49.16 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=64.0
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+..+++||-+|+ |.+ |.....+++.. +++|++++.+++..+.+++ .|... ++..+.
T Consensus 160 ~~~g~~vlV~Ga~ggi--------------G~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~~---~~~~~~ 216 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGV--------------GTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAAA---GFNYKK 216 (354)
T ss_dssp CCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSE---EEETTT
T ss_pred CCCCCEEEEECCccHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCcE---EEecCC
Confidence 345679999984 322 66666666664 5799999999998877643 35431 222111
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+..+.+........+|++|...+.. .++.+.+.|++||.++.-..
T Consensus 217 ~~~~~~~~~~~~~~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 217 EDFSEATLKFTKGAGVNLILDCIGGS----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp SCHHHHHHHHTTTSCEEEEEESSCGG----GHHHHHHHEEEEEEEEECCC
T ss_pred hHHHHHHHHHhcCCCceEEEECCCch----HHHHHHHhccCCCEEEEEec
Confidence 22222222211134799999877653 35667889999999987543
No 369
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.20 E-value=0.044 Score=50.40 Aligned_cols=95 Identities=11% Similarity=0.152 Sum_probs=64.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc-EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE---cc
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH---GL 194 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~-~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~---gd 194 (294)
++++||-+|+|.+ |..++.+++.. +. +|++++.+++..+.+++. .+ .++. .+
T Consensus 164 ~g~~VlV~GaG~v--------------G~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l------a~--~v~~~~~~~ 219 (343)
T 2dq4_A 164 SGKSVLITGAGPI--------------GLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY------AD--RLVNPLEED 219 (343)
T ss_dssp TTSCEEEECCSHH--------------HHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT------CS--EEECTTTSC
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh------HH--hccCcCccC
Confidence 6779999999654 77788888876 45 899999999887766553 11 1221 12
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
..+.+.++. ...+|+||...+. ...++.+.+.|+++|.++.-.
T Consensus 220 ~~~~~~~~~----~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 220 LLEVVRRVT----GSGVEVLLEFSGN---EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHHHHHHH----SSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHhc----CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 223333321 3469999876653 345778889999999988643
No 370
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.20 E-value=0.22 Score=46.06 Aligned_cols=96 Identities=19% Similarity=0.231 Sum_probs=64.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++||-+|+|.+ |..++.+++.. +++|++++.+++..+.+++ +.|... ++..+-.+.
T Consensus 180 ~g~~VlV~GaG~v--------------G~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~ 237 (357)
T 2cf5_A 180 PGLRGGILGLGGV--------------GHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD---YVIGSDQAK 237 (357)
T ss_dssp TTCEEEEECCSHH--------------HHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce---eeccccHHH
Confidence 6779999998764 88888888876 4799999999987765542 456443 222111233
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.++ .+.+|+||--.+... .++.+.+.|++||.++.-.
T Consensus 238 ~~~~-----~~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 238 MSEL-----ADSLDYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp HHHS-----TTTEEEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred HHHh-----cCCCCEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 3332 347999987665331 2445778999999998744
No 371
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.10 E-value=0.19 Score=46.72 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=63.0
Q ss_pred hCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 118 LGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
.++++||-+|+ |.+ |..++.+++.. +++|+++. +++..+.+ ++.|...-+.....+..
T Consensus 163 ~~g~~VlV~Ga~G~v--------------G~~a~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~~vi~~~~~~~~ 221 (371)
T 3gqv_A 163 SKPVYVLVYGGSTAT--------------ATVTMQMLRLS--GYIPIATC-SPHNFDLA----KSRGAEEVFDYRAPNLA 221 (371)
T ss_dssp SSCCEEEEESTTSHH--------------HHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCSEEEETTSTTHH
T ss_pred CCCcEEEEECCCcHH--------------HHHHHHHHHHC--CCEEEEEe-CHHHHHHH----HHcCCcEEEECCCchHH
Confidence 45679999998 432 77888888876 57888875 77776655 45665432222222333
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcc-cCCeEEEEec
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLI-RVGGIIVIDN 244 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lL-kpgG~ivid~ 244 (294)
+.+.++. .+.+|++|-..+. ...++.+.+.| ++||.++.-.
T Consensus 222 ~~v~~~t----~g~~d~v~d~~g~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 222 QTIRTYT----KNNLRYALDCITN---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHHHHHT----TTCCCEEEESSCS---HHHHHHHHHHSCTTCEEEEESS
T ss_pred HHHHHHc----cCCccEEEECCCc---hHHHHHHHHHhhcCCCEEEEEe
Confidence 3333331 3459999876653 34567778888 6999998754
No 372
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.01 E-value=0.045 Score=49.77 Aligned_cols=54 Identities=19% Similarity=0.316 Sum_probs=39.4
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc---cc-------------h-------HHHHHHHHhcccCCeEEEE
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK---RM-------------Y-------QEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~---~~-------------~-------~~~~~~~~~lLkpgG~ivi 242 (294)
.++++++||+.+.++.+ +.++||+||.|++- .. + .+.++.+.++|+|||.+++
T Consensus 20 ~~~~i~~gD~~~~l~~l----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i 95 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVI 95 (297)
T ss_dssp -CEEEEESCHHHHHTTS----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 36899999999876654 25799999999872 11 1 2455677889999999876
Q ss_pred e
Q 022597 243 D 243 (294)
Q Consensus 243 d 243 (294)
.
T Consensus 96 ~ 96 (297)
T 2zig_A 96 V 96 (297)
T ss_dssp E
T ss_pred E
Confidence 3
No 373
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=93.83 E-value=0.16 Score=46.77 Aligned_cols=108 Identities=13% Similarity=0.116 Sum_probs=62.3
Q ss_pred hhCC-CeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--
Q 022597 117 ILGA-QRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-- 192 (294)
Q Consensus 117 ~~~~-~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-- 192 (294)
+..+ ++||-+|+ |.+ |..++.+++.. +++++++..+++.++..++.+++.|...-+....
T Consensus 164 ~~~g~~~VlV~Ga~G~v--------------G~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~ 227 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAV--------------GKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNN 227 (364)
T ss_dssp CCTTTCEEEESCTTSHH--------------HHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHH
T ss_pred cCCCCcEEEECCCCcHH--------------HHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccc
Confidence 3456 79999997 543 77788888876 5788877765543222233445667543121110
Q ss_pred -cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 193 -GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 193 -gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+..+.+.++..++ ...+|+||-..+.. ... .+.+.|++||.++.-..
T Consensus 228 ~~~~~~~i~~~t~~~-~~g~Dvvid~~G~~---~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 228 SREFGPTIKEWIKQS-GGEAKLALNCVGGK---SST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp CGGGHHHHHHHHHHH-TCCEEEEEESSCHH---HHH-HHHHTSCTTCEEEECCC
T ss_pred hHHHHHHHHHHhhcc-CCCceEEEECCCch---hHH-HHHHHhccCCEEEEecC
Confidence 12222333221000 34799998766532 223 56799999999987543
No 374
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.82 E-value=0.038 Score=51.26 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=37.9
Q ss_pred HHHHHHhh--hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCCh---HHHHHHHHHHHHhC
Q 022597 110 LLAMLVQI--LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAG 183 (294)
Q Consensus 110 lL~~l~~~--~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~---~~~~~A~~~~~~~g 183 (294)
++..++.. .++..|||--||+ |..+.+.... +-+.+++|+++ +.++.++++++++|
T Consensus 231 l~~~~i~~~~~~~~~vlDpF~Gs---------------Gtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 231 VIERLVRALSHPGSTVLDFFAGS---------------GVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHSCTTCEEEETTCTT---------------CHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHhCCCCCEEEecCCCC---------------CHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 44444443 3456788887777 7666655554 46899999999 99999999998877
No 375
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.79 E-value=0.43 Score=37.95 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=60.3
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh-
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS- 198 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~- 198 (294)
.+|+=+|+ |..+..+++.+. .+..|+++|.+++.++.+++ . .+.++.||+.+.
T Consensus 8 ~~viIiG~-----------------G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 8 NHALLVGY-----------------GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEE 62 (140)
T ss_dssp SCEEEECC-----------------SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHH
T ss_pred CCEEEECc-----------------CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHH
Confidence 47889998 666666666653 35789999999998776543 2 356788987643
Q ss_pred -HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 199 -LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 199 -l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
+... .-..+|.+++-.+........-...+.+.|+..++.
T Consensus 63 ~l~~a----~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 63 IMQLA----HLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp HHHHT----TGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHhc----CcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 3332 135789998876543322223334566777776664
No 376
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.70 E-value=0.025 Score=52.35 Aligned_cols=60 Identities=7% Similarity=-0.032 Sum_probs=42.4
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++..|||--||+ |..+.+... + +-+.+++|+++..++.+++++++++.. ...+.+|+.++
T Consensus 252 ~~~~VlDpF~Gs---------------Gtt~~aa~~-~--gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i 311 (323)
T 1boo_A 252 PDDLVVDIFGGS---------------NTTGLVAER-E--SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRI 311 (323)
T ss_dssp TTCEEEETTCTT---------------CHHHHHHHH-T--TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHH
T ss_pred CCCEEEECCCCC---------------CHHHHHHHH-c--CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHH
Confidence 456788877777 665555443 3 568999999999999999999887753 34444555443
No 377
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.64 E-value=0.088 Score=47.89 Aligned_cols=95 Identities=15% Similarity=0.219 Sum_probs=59.9
Q ss_pred eEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+||-+|+ |.+ |..++.+++.. +++|++++.+++..+.+++ .|...-+.....+ .+.+.
T Consensus 152 ~VlV~Ga~G~v--------------G~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~-~~~~~ 210 (328)
T 1xa0_A 152 PVLVTGATGGV--------------GSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKEVLAREDVM-AERIR 210 (328)
T ss_dssp CEEESSTTSHH--------------HHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSEEEECC---------
T ss_pred eEEEecCCCHH--------------HHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCCcH-HHHHH
Confidence 7999997 443 77778888876 4789999999887776653 5643222211111 11122
Q ss_pred HHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 201 ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+ ..+.+|+||-..+.. .++.+.+.|++||.++.-..
T Consensus 211 ~~----~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 211 PL----DKQRWAAAVDPVGGR----TLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp -C----CSCCEEEEEECSTTT----THHHHHHTEEEEEEEEECSC
T ss_pred Hh----cCCcccEEEECCcHH----HHHHHHHhhccCCEEEEEee
Confidence 21 134799998766542 46678899999999987543
No 378
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.54 E-value=0.31 Score=45.21 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=62.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++||-+|+|.+ |..++.+++.. +.+|++++.+++..+.+++ +.|... ++...-.+.
T Consensus 187 ~g~~VlV~GaG~v--------------G~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---v~~~~~~~~ 244 (366)
T 1yqd_A 187 PGKHIGIVGLGGL--------------GHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGADS---FLVSRDQEQ 244 (366)
T ss_dssp TTCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCSE---EEETTCHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCce---EEeccCHHH
Confidence 5679999998764 77778888876 4799999999987765542 445432 222211233
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+.++ .+.+|+||...+... .++.+.+.|+++|.++.-.
T Consensus 245 ~~~~-----~~~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 245 MQAA-----AGTLDGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp HHHT-----TTCEEEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred HHHh-----hCCCCEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 3333 357999987765331 2345678889999988643
No 379
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.44 E-value=0.17 Score=46.90 Aligned_cols=95 Identities=9% Similarity=0.089 Sum_probs=62.4
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCCh---HHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~---~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+++||-+|+|.+ |..++.+++.. +++|++++.++ +..+.+++ .|.. .+ ..+
T Consensus 181 g~~VlV~GaG~v--------------G~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v---~~~-- 234 (366)
T 2cdc_A 181 CRKVLVVGTGPI--------------GVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YY---NSS-- 234 (366)
T ss_dssp TCEEEEESCHHH--------------HHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EE---ECT--
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-ee---chH--
Confidence 789999999643 76777777765 46999999998 77666543 4542 22 111
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHH-HHHHhcccCCeEEEEecc
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYF-ELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~-~~~~~lLkpgG~ivid~v 245 (294)
+..+.+.. . .+.+|+||...+.. ..+ +.+.+.|++||.++.-..
T Consensus 235 ~~~~~~~~-~-~~~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 235 NGYDKLKD-S-VGKFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp TCSHHHHH-H-HCCEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSC
T ss_pred HHHHHHHH-h-CCCCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEec
Confidence 22222211 1 25799999776543 235 778899999999887543
No 380
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.36 E-value=0.067 Score=48.53 Aligned_cols=93 Identities=15% Similarity=0.103 Sum_probs=62.6
Q ss_pred eEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+||-+|+ |.+ |..++.+++.. +++|++++.+++..+.+++ .|... ++.....+..
T Consensus 149 ~VlV~Ga~G~v--------------G~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~- 204 (324)
T 3nx4_A 149 EVVVTGASGGV--------------GSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGANR---ILSRDEFAES- 204 (324)
T ss_dssp CEEESSTTSHH--------------HHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCSE---EEEGGGSSCC-
T ss_pred eEEEECCCcHH--------------HHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE---EEecCCHHHH-
Confidence 4999997 543 88888888876 4799999999998877764 56432 2211111111
Q ss_pred HHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 201 ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.....+.+|++|-..+. +.++.+++.|+++|.++.-..
T Consensus 205 ---~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 205 ---RPLEKQLWAGAIDTVGD----KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ---CSSCCCCEEEEEESSCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred ---HhhcCCCccEEEECCCc----HHHHHHHHHHhcCCEEEEEec
Confidence 11123579998865543 268889999999999987543
No 381
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.24 E-value=1.2 Score=41.47 Aligned_cols=111 Identities=11% Similarity=0.091 Sum_probs=72.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhC--------------
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG-------------- 183 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~g-------------- 183 (294)
.+...|+.+|||. ..-...+....+ +.+++-+|. |+.++.-++.+++.+
T Consensus 96 ~~~~qVV~LGaGl---------------DTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~ 158 (334)
T 1rjd_A 96 NEKVQVVNLGCGS---------------DLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTA 158 (334)
T ss_dssp CSSEEEEEETCTT---------------CCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCC
T ss_pred CCCcEEEEeCCCC---------------ccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhccccccccc
Confidence 4567899999987 666666665433 566677776 888888888887752
Q ss_pred ------CCCcEEEEEcchhhh--HHHH-hhcCCCCceeEEEEcCC-----ccchHHHHHHHHhcccCCeEE-EEeccc
Q 022597 184 ------VSHKVKIKHGLAADS--LKAL-ILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGII-VIDNVL 246 (294)
Q Consensus 184 ------l~~~v~~~~gda~~~--l~~l-~~~~~~~~fD~vfiD~~-----~~~~~~~~~~~~~lLkpgG~i-vid~vl 246 (294)
..++.+++..|..+. +..+ ...+..+...+++.-+- ......+++.+.... |+|.+ ++|-+.
T Consensus 159 ~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 159 KSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp CTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred ccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 236799999998763 3332 22222345566655432 455677888887777 56655 566553
No 382
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.87 E-value=0.21 Score=45.31 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=62.7
Q ss_pred HHhhhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE
Q 022597 114 LVQILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH 192 (294)
Q Consensus 114 l~~~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~ 192 (294)
..+..++++||-+| +|.+ |..++.+++.. +++|++++ +++..+. +++.|... ++.
T Consensus 147 ~~~~~~g~~vlV~Ga~G~v--------------G~~a~q~a~~~--Ga~vi~~~-~~~~~~~----~~~lGa~~---~i~ 202 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGV--------------GHLAIQLAKQK--GTTVITTA-SKRNHAF----LKALGAEQ---CIN 202 (321)
T ss_dssp HTTCCTTCEEEESSTTSHH--------------HHHHHHHHHHT--TCEEEEEE-CHHHHHH----HHHHTCSE---EEE
T ss_pred hcCCCCCCEEEEEcCCcHH--------------HHHHHHHHHHc--CCEEEEEe-ccchHHH----HHHcCCCE---EEe
Confidence 34556778999997 7654 88888888876 47899887 4444444 45567653 222
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
....+.+... ...+|+||-..+.. .++.+.+.|++||.++.-
T Consensus 203 ~~~~~~~~~~-----~~g~D~v~d~~g~~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 203 YHEEDFLLAI-----STPVDAVIDLVGGD----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp TTTSCHHHHC-----CSCEEEEEESSCHH----HHHHHGGGEEEEEEEEEC
T ss_pred CCCcchhhhh-----ccCCCEEEECCCcH----HHHHHHHhccCCCEEEEe
Confidence 2222212221 25799998766532 237788999999999874
No 383
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.61 E-value=0.23 Score=46.16 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=61.8
Q ss_pred hhCCCeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++||-+| +|.+ |..++.+++.. +++|++++ +++..+.+ ++.|... ++..+.
T Consensus 181 ~~~g~~VlV~Ga~G~v--------------G~~~~qla~~~--Ga~Vi~~~-~~~~~~~~----~~lGa~~---v~~~~~ 236 (375)
T 2vn8_A 181 NCTGKRVLILGASGGV--------------GTFAIQVMKAW--DAHVTAVC-SQDASELV----RKLGADD---VIDYKS 236 (375)
T ss_dssp TCTTCEEEEETTTSHH--------------HHHHHHHHHHT--TCEEEEEE-CGGGHHHH----HHTTCSE---EEETTS
T ss_pred cCCCCEEEEECCCCHH--------------HHHHHHHHHhC--CCEEEEEe-ChHHHHHH----HHcCCCE---EEECCc
Confidence 44567999999 5554 77778888876 47899988 66655544 4556432 222221
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
.+..+.+.. ...+|+||-..+.. ...++...+.|++||.++.-
T Consensus 237 ~~~~~~~~~---~~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 237 GSVEEQLKS---LKPFDFILDNVGGS--TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp SCHHHHHHT---SCCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEES
T ss_pred hHHHHHHhh---cCCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEe
Confidence 223333321 24799998766533 12356678899999999864
No 384
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.52 E-value=0.49 Score=44.26 Aligned_cols=100 Identities=18% Similarity=0.174 Sum_probs=60.3
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+++|+=+|+|.+ |.....++... +.+|+++|.+++..+.+++. .|. .+.....+..+
T Consensus 164 l~~~~V~ViGaG~i--------------G~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~---~g~--~~~~~~~~~~~ 222 (369)
T 2eez_A 164 VAPASVVILGGGTV--------------GTNAAKIALGM--GAQVTILDVNHKRLQYLDDV---FGG--RVITLTATEAN 222 (369)
T ss_dssp BCCCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---TTT--SEEEEECCHHH
T ss_pred CCCCEEEEECCCHH--------------HHHHHHHHHhC--CCEEEEEECCHHHHHHHHHh---cCc--eEEEecCCHHH
Confidence 35689999999653 65555666655 57999999999877665432 233 23333333322
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccc--hHH-HHHHHHhcccCCeEEEEec
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRM--YQE-YFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~--~~~-~~~~~~~lLkpgG~ivid~ 244 (294)
+.+.. ..+|+|+...+... ... +.+...+.+++||+++.-.
T Consensus 223 -l~~~~-----~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 223 -IKKSV-----QHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp -HHHHH-----HHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred -HHHHH-----hCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 33332 36899987765321 111 2456678899999877543
No 385
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.47 E-value=0.31 Score=45.06 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=64.9
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEc-
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG- 193 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~g- 193 (294)
....++++||-+|+|.+ |..++.+++..+ +++|++++.+++..+.++ +.|... ++..
T Consensus 182 ~~~~~g~~VlV~GaG~v--------------G~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~---vi~~~ 239 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGL--------------GHIAVQLLKVMT-PATVIALDVKEEKLKLAE----RLGADH---VVDAR 239 (359)
T ss_dssp TTCCTTCEEEEECCSHH--------------HHHHHHHHHHHC-CCEEEEEESSHHHHHHHH----HTTCSE---EEETT
T ss_pred cCCCCCCEEEEECCCHH--------------HHHHHHHHHHcC-CCeEEEEeCCHHHHHHHH----HhCCCE---EEecc
Confidence 34556789999999754 888888888762 468999999999887765 356432 2221
Q ss_pred c-hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 L-AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 d-a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
+ ..+.+.++. ....+|+||-..+... ...++.+.+. +||.++.-.
T Consensus 240 ~~~~~~v~~~~---~g~g~Dvvid~~G~~~-~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 240 RDPVKQVMELT---RGRGVNVAMDFVGSQA-TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp SCHHHHHHHHT---TTCCEEEEEESSCCHH-HHHHGGGGEE--EEEEEEECC
T ss_pred chHHHHHHHHh---CCCCCcEEEECCCCch-HHHHHHHhhc--CCCEEEEEe
Confidence 1 122333331 1237999987665321 1156666666 899888644
No 386
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.42 E-value=0.11 Score=47.80 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=56.5
Q ss_pred hhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 116 QILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
+..++++||-+|+ |.+ |..++.+++... +.+|++++ +++..+.++ .|...-+. ...+
T Consensus 139 ~~~~g~~VlV~Ga~G~v--------------G~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~ 196 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGV--------------GQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNAD 196 (349)
T ss_dssp CCCTTCEEEESSTTSHH--------------HHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSC
T ss_pred CCCCCCEEEEEcCCcHH--------------HHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCcc
Confidence 3456679999998 432 666666666553 56888887 454444332 45443222 1222
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
..+.+..+ . .+.+|+||-..+... ++.+++.|++||.+++-.
T Consensus 197 ~~~~~~~~---~-~~g~Dvv~d~~g~~~----~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 197 YVQEVKRI---S-AEGVDIVLDCLCGDN----TGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HHHHHHHH---C-TTCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred HHHHHHHh---c-CCCceEEEECCCchh----HHHHHHHhhcCCEEEEEC
Confidence 33333333 1 457999997665332 367889999999998754
No 387
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.29 E-value=0.059 Score=48.84 Aligned_cols=89 Identities=15% Similarity=0.109 Sum_probs=59.3
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++||-+|+|.+ |..++.+++.. +++|++++ +++..+.+++ .|.. .++ .| .
T Consensus 140 ~~~g~~VlV~GaG~v--------------G~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~-~d-~ 193 (315)
T 3goh_A 140 LTKQREVLIVGFGAV--------------NNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGVR---HLY-RE-P 193 (315)
T ss_dssp CCSCCEEEEECCSHH--------------HHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTEE---EEE-SS-G
T ss_pred CCCCCEEEEECCCHH--------------HHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCCC---EEE-cC-H
Confidence 346679999999764 88888888876 46999999 8888777654 4542 222 23 1
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+.+ .+.+|+||-..+.. .++.+++.|++||.++.-
T Consensus 194 ---~~v-----~~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 194 ---SQV-----TQKYFAIFDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ---GGC-----CSCEEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred ---HHh-----CCCccEEEECCCch----hHHHHHHHhcCCCEEEEE
Confidence 222 46899998655432 235678999999998864
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.13 E-value=0.42 Score=44.64 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=60.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++++|+=+|+|.+ |.....++... +++|+.+|.+++..+.+++.... .+.....+..+.
T Consensus 166 ~~~~VlViGaGgv--------------G~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~ 224 (361)
T 1pjc_A 166 KPGKVVILGGGVV--------------GTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEI 224 (361)
T ss_dssp CCCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHH
Confidence 4579999999753 66666667665 46999999999988877665422 233333232232
Q ss_pred HHHHhhcCCCCceeEEEEcCCccc--hHH-HHHHHHhcccCCeEEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRM--YQE-YFELLLQLIRVGGIIVI 242 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~--~~~-~~~~~~~lLkpgG~ivi 242 (294)
.+.+ ..+|+|+.-..... .+. ..+...+.+++||+++-
T Consensus 225 ~~~~------~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 225 ETAV------AEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp HHHH------HTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEE
T ss_pred HHHH------cCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEE
Confidence 2222 36899986554222 011 13446688999997764
No 389
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=92.05 E-value=0.029 Score=53.24 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=64.4
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHH---------------CCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALV---------------LPESGCLVACERDARSLEVAKKYYERAGVS 185 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~---------------~~~~~~v~~id~~~~~~~~A~~~~~~~gl~ 185 (294)
-+|+|+||++ |..|+.+... -++.-+|+..|+-..-...+-+.+....-.
T Consensus 53 ~~IaDlGCs~---------------G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~ 117 (359)
T 1m6e_X 53 LAIADLGCSS---------------GPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV 117 (359)
T ss_dssp ECCEEESCCS---------------STTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC
T ss_pred eEEEecCCCC---------------CcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc
Confidence 3799999999 7766654433 234578899998777666554444321100
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC------------------------------------ccchHHHHHH
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAE------------------------------------KRMYQEYFEL 229 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~------------------------------------~~~~~~~~~~ 229 (294)
.+-.+..|.....-..+. +.+++|+||.... ..++..+++.
T Consensus 118 ~~~~f~~gvpgSFy~rlf---p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~ 194 (359)
T 1m6e_X 118 DGVCFINGVPGSFYGRLF---PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC 194 (359)
T ss_dssp TTCEEEEEEESCSSSCCS---CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEecchhhhhccC---CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 123444444332211111 2689999986421 0123455777
Q ss_pred HHhcccCCeEEEEecc
Q 022597 230 LLQLIRVGGIIVIDNV 245 (294)
Q Consensus 230 ~~~lLkpgG~ivid~v 245 (294)
..+-|+|||.+++.-.
T Consensus 195 Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 195 RAQEVVPGGRMVLTIL 210 (359)
T ss_dssp HHHHBCTTCEEEEEEE
T ss_pred HHHHhcCCceEEEEEe
Confidence 7889999999998655
No 390
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.93 E-value=0.2 Score=49.24 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=38.0
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
+++|+-||. |..++.+..+ .--.|.++|.++...+.-+.++. ......++.+|..++.
T Consensus 90 ~viDLFaG~---------------GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 90 RFIDLFAGI---------------GGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEESCTT---------------SHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHHH
T ss_pred eEEEecCCc---------------cHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhhh
Confidence 677777766 6666665543 12358899999988877666652 1123456778887764
No 391
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.90 E-value=0.41 Score=45.06 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=60.2
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+++|+=+|+|.+ |.....++..+ +.+|+++|.+++..+.+++.+ |.. +.....+..+
T Consensus 166 l~g~~V~ViG~G~i--------------G~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~ 224 (377)
T 2vhw_A 166 VEPADVVVIGAGTA--------------GYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYE 224 (377)
T ss_dssp BCCCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHH
T ss_pred CCCCEEEEECCCHH--------------HHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHH
Confidence 45789999999764 66666666665 469999999998876665432 332 2222222222
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccc--h-HHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRM--Y-QEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~--~-~~~~~~~~~lLkpgG~ivid 243 (294)
+.+.. ...|+|+.-...+. . .-+.+...+.++|||+++--
T Consensus 225 -l~~~l-----~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 225 -LEGAV-----KRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp -HHHHH-----HHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred -HHHHH-----cCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 33321 36899987543111 1 11234567889999988743
No 392
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.82 E-value=0.49 Score=43.36 Aligned_cols=89 Identities=20% Similarity=0.252 Sum_probs=59.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-Cc--EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~--~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
++|.=||+ |..+..++..+.. +. +|+++|.+++.++.++ +.|..+. ...+..+
T Consensus 34 ~kI~IIG~-----------------G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~----~~G~~~~---~~~~~~~ 89 (314)
T 3ggo_A 34 QNVLIVGV-----------------GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIIDE---GTTSIAK 89 (314)
T ss_dssp SEEEEESC-----------------SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCSE---EESCTTG
T ss_pred CEEEEEee-----------------CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----HCCCcch---hcCCHHH
Confidence 47888998 4455555554422 33 8999999998876654 3454321 1233332
Q ss_pred -hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 -SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 -~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
. ....|+||+-.+.....+.++.+.+.+++|.++ +|
T Consensus 90 ~~---------~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv-~d 126 (314)
T 3ggo_A 90 VE---------DFSPDFVMLSSPVRTFREIAKKLSYILSEDATV-TD 126 (314)
T ss_dssp GG---------GGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEE-EE
T ss_pred Hh---------hccCCEEEEeCCHHHHHHHHHHHhhccCCCcEE-EE
Confidence 2 246899999988777888899999999988755 44
No 393
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.58 E-value=0.76 Score=40.57 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=51.7
Q ss_pred cHHHHHHHHHCCC-Cc--EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCC-ceeEEEEcCCcc
Q 022597 146 GYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS-SYDFAFVDAEKR 221 (294)
Q Consensus 146 G~~sl~la~~~~~-~~--~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~-~fD~vfiD~~~~ 221 (294)
|..+..++..+.. +. +|+++|.+++..+.++ +.|... .. ..+..+. .. ..|+||+-.+..
T Consensus 10 G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~~-~~~~~~~---------~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 10 GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--EG-TTSIAKV---------EDFSPDFVMLSSPVR 73 (281)
T ss_dssp SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG---------GGTCCSEEEECSCHH
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--cc-cCCHHHH---------hcCCCCEEEEcCCHH
Confidence 5555565555432 23 7999999998776543 345432 11 2233222 24 689999998877
Q ss_pred chHHHHHHHHhcccCCeEEE
Q 022597 222 MYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 222 ~~~~~~~~~~~lLkpgG~iv 241 (294)
...+.++.+.+.+++|.+++
T Consensus 74 ~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 74 TFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp HHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEE
Confidence 77788888888899887554
No 394
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.57 E-value=0.91 Score=37.38 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=58.0
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-C-CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-E-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~-~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+|+=+|+ |..+..+++.+. . +..|+++|.+++..+.++ ..| +.++.+|..+
T Consensus 39 ~~~v~IiG~-----------------G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g----~~~~~gd~~~ 93 (183)
T 3c85_A 39 HAQVLILGM-----------------GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG----RNVISGDATD 93 (183)
T ss_dssp TCSEEEECC-----------------SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT----CCEEECCTTC
T ss_pred CCcEEEECC-----------------CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC----CCEEEcCCCC
Confidence 347999998 666677666653 2 568999999998776543 333 4566777654
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
. ..+........+|.|++-.+........-...+.+.|++.++..
T Consensus 94 ~-~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 94 P-DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp H-HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred H-HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 2 11211101356899998655332222222334556677777653
No 395
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.37 E-value=0.073 Score=61.76 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=52.4
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC----CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE----SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~----~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..+|||||.|+ |..+..+...+.. ..+++..|+++...+.|++.++... +....-|.
T Consensus 1241 ~~~ilEigagt---------------g~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~ 1301 (2512)
T 2vz8_A 1241 KMKVVEVLAGD---------------GQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDP 1301 (2512)
T ss_dssp EEEEEEESCSS---------------SCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCS
T ss_pred CceEEEECCCc---------------cHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccc
Confidence 45999999999 7666666666542 2478899999999888888887532 22110011
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCC---ccchHHHHHHHHhcccCCeEEEEecc
Q 022597 196 ADSLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~---~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+. ..+ ..++||+|+.... ..+..+.+..+.++|+|||.+++..+
T Consensus 1302 ~~~-~~~----~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1302 ANP-APG----SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp SCC-CC---------CCEEEEECC--------------------CCEEEEEEC
T ss_pred ccc-ccC----CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 110 000 1357999986532 23456778889999999999998754
No 396
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.36 E-value=2.4 Score=32.44 Aligned_cols=95 Identities=18% Similarity=0.134 Sum_probs=56.2
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
.+|+=+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ ..| +.++.+|..+.
T Consensus 5 m~i~IiG~-----------------G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~----~~~~~~d~~~~- 59 (140)
T 1lss_A 5 MYIIIAGI-----------------GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EID----ALVINGDCTKI- 59 (140)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCS----SEEEESCTTSH-
T ss_pred CEEEEECC-----------------CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcC----cEEEEcCCCCH-
Confidence 47888888 666666666553 35689999999987654432 222 45667776432
Q ss_pred HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 200 KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
..+.... ...+|.|++-.+.......+..+.+.+.++-+++
T Consensus 60 ~~l~~~~-~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 60 KTLEDAG-IEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp HHHHHTT-TTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHcC-cccCCEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 1111111 3578999987764433344444556677765443
No 397
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.27 E-value=0.52 Score=45.91 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=62.4
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHH---HhCC---------
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYE---RAGV--------- 184 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~---~~gl--------- 184 (294)
.+..+|--||+ |+.++.++..+.. +.+|+++|++++.++..++... ..|+
T Consensus 6 ~~~~~I~VIG~-----------------G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~ 68 (478)
T 2y0c_A 6 HGSMNLTIIGS-----------------GSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRS 68 (478)
T ss_dssp -CCCEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH
T ss_pred CCCceEEEECc-----------------CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcc
Confidence 35568889999 6666666665532 4689999999998776654210 0010
Q ss_pred CCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc----------cchHHHHHHHHhcccCCeEEEEecc
Q 022597 185 SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK----------RMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 185 ~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~----------~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..++++ ..|..+.+ ...|+||+-.+. ....+.++.+.+.|++|.+++.-..
T Consensus 69 ~~~l~~-ttd~~~a~---------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 69 AGRLRF-STDIEAAV---------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp TTCEEE-ECCHHHHH---------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred cCCEEE-ECCHHHHh---------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 112333 22332222 357999987653 4456777888889999887765443
No 398
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.93 E-value=2.1 Score=36.71 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=62.2
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
.++|+=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.||+.+.
T Consensus 9 ~~~viI~G~-----------------G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~- 61 (234)
T 2aef_A 9 SRHVVICGW-----------------SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRV- 61 (234)
T ss_dssp -CEEEEESC-----------------CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCH-
T ss_pred CCEEEEECC-----------------ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCH-
Confidence 348999888 7788888888865434999999998765443 2 378889998642
Q ss_pred HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 200 KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
..+...+ -...|.|++-.+........-...+.+.|+..++..
T Consensus 62 ~~l~~a~-i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 62 SDLEKAN-VRGARAVIVDLESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHTT-CTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHhcC-cchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 1221111 357899988765443333344445667787666653
No 399
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.72 E-value=0.11 Score=47.33 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=61.0
Q ss_pred eEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+||-+|+ |.+ |..++.+++.. +++|++++.+++..+.+++ .|... ++ |..+.-.
T Consensus 153 ~VlV~Ga~G~v--------------G~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---v~--~~~~~~~ 207 (330)
T 1tt7_A 153 SVLVTGATGGV--------------GGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGASE---VI--SREDVYD 207 (330)
T ss_dssp CEEEESTTSHH--------------HHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCSE---EE--EHHHHCS
T ss_pred eEEEECCCCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EE--ECCCchH
Confidence 7999997 543 77777788776 4789999999887776654 45432 22 1211100
Q ss_pred HHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEecc
Q 022597 201 ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
........+.+|++|-..+. +.++.+.+.|++||.++.-..
T Consensus 208 ~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 208 GTLKALSKQQWQGAVDPVGG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp SCCCSSCCCCEEEEEESCCT----HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHHhhcCCccEEEECCcH----HHHHHHHHhhcCCCEEEEEec
Confidence 00011113469999876653 357788999999999987543
No 400
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=90.71 E-value=0.26 Score=46.01 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=54.3
Q ss_pred hCCCeEEEE--ccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEV--GVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEi--G~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.++++||-+ |+|.+ |..++.+++.. +++|++++.+++..+.+++ .|...-+.....+.
T Consensus 169 ~~g~~vlV~gag~G~v--------------G~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~ 228 (379)
T 3iup_A 169 LEGHSALVHTAAASNL--------------GQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTF 228 (379)
T ss_dssp HTTCSCEEESSTTSHH--------------HHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTH
T ss_pred cCCCEEEEECCCCCHH--------------HHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHH
Confidence 567789988 55543 66777777776 4789999999998877654 66554232222233
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccc-hHHHHHHH
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRM-YQEYFELL 230 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~-~~~~~~~~ 230 (294)
.+.+.++.. ...+|+||-..+... ....++.+
T Consensus 229 ~~~v~~~t~---~~g~d~v~d~~g~~~~~~~~~~~l 261 (379)
T 3iup_A 229 MQDLTEALV---STGATIAFDATGGGKLGGQILTCM 261 (379)
T ss_dssp HHHHHHHHH---HHCCCEEEESCEEESHHHHHHHHH
T ss_pred HHHHHHHhc---CCCceEEEECCCchhhHHHHHHhc
Confidence 333333211 236999987665433 34444444
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.65 E-value=1.8 Score=33.82 Aligned_cols=70 Identities=11% Similarity=0.228 Sum_probs=47.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh-
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS- 198 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~- 198 (294)
++++=+|+ |..+..+++.+. .+.+|+++|.+++.++.+++ .| +.++.+|..+.
T Consensus 7 ~~v~I~G~-----------------G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~ 61 (141)
T 3llv_A 7 YEYIVIGS-----------------EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDES 61 (141)
T ss_dssp CSEEEECC-----------------SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHH
T ss_pred CEEEEECC-----------------CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHH
Confidence 47899998 556666666553 35789999999987765543 22 57788888653
Q ss_pred -HHHHhhcCCCCceeEEEEcCC
Q 022597 199 -LKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 199 -l~~l~~~~~~~~fD~vfiD~~ 219 (294)
+... ....+|.|++-.+
T Consensus 62 ~l~~~----~~~~~d~vi~~~~ 79 (141)
T 3llv_A 62 FYRSL----DLEGVSAVLITGS 79 (141)
T ss_dssp HHHHS----CCTTCSEEEECCS
T ss_pred HHHhC----CcccCCEEEEecC
Confidence 3322 1357899988766
No 402
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.64 E-value=0.79 Score=42.62 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=53.4
Q ss_pred cHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC------
Q 022597 146 GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE------ 219 (294)
Q Consensus 146 G~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~------ 219 (294)
|..++.+..+--....+.++|+++...+.-+.|+.. ..+..+|..+....-.. ...+|+++..++
T Consensus 14 GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~---~~~~D~l~ggpPCQ~fS~ 84 (333)
T 4h0n_A 14 GGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK---KWNVDTILMSPPCQPFTR 84 (333)
T ss_dssp THHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH---HTTCCEEEECCCCCCSEE
T ss_pred cHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc---cCCCCEEEecCCCcchhh
Confidence 656666655421114578999999988877776632 34567888765432211 136899987644
Q ss_pred --c-------c--chHHHHHHHHhccc-CCeEEEEecc
Q 022597 220 --K-------R--MYQEYFELLLQLIR-VGGIIVIDNV 245 (294)
Q Consensus 220 --~-------~--~~~~~~~~~~~lLk-pgG~ivid~v 245 (294)
+ + -+.++++ +.+.++ |. ++++.||
T Consensus 85 ag~~~~~~d~r~~L~~~~~r-~i~~~~~P~-~~vlENV 120 (333)
T 4h0n_A 85 NGKYLDDNDPRTNSFLYLIG-ILDQLDNVD-YILMENV 120 (333)
T ss_dssp TTEECCTTCTTSCCHHHHHH-HGGGCTTCC-EEEEEEC
T ss_pred hhhccCCcCcccccHHHHHH-HHHHhcCCC-EEEEecc
Confidence 1 1 1344443 344555 64 7888998
No 403
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=90.54 E-value=0.84 Score=42.90 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=68.3
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCC-cEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~-~v~~~~gda~~~l 199 (294)
.+||.++-.. |..+.+++.. .++.+.-+--.....+.|++++|+.. .+++..... +
T Consensus 40 ~~~~~~~d~~---------------gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-- 96 (375)
T 4dcm_A 40 GPVLILNDAF---------------GALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-D-- 96 (375)
T ss_dssp SCEEEECCSS---------------SHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-C--
T ss_pred CCEEEECCCC---------------CHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-c--
Confidence 4799999999 9888887643 34666556666778889999999975 477653321 1
Q ss_pred HHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccCCeEEEEe
Q 022597 200 KALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+ .+.||+|++-.++ ......+..+...|++|+.+++-
T Consensus 97 --~-----~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 97 --Y-----PQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp --C-----CSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred --c-----ccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 1 5789999887764 44567778888999999988764
No 404
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.46 E-value=1.9 Score=41.70 Aligned_cols=99 Identities=11% Similarity=0.214 Sum_probs=62.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHH------------HHHhCCCCcE
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKY------------YERAGVSHKV 188 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~------------~~~~gl~~~v 188 (294)
.+|-=||+ |+.+..++..+..+.+|+++|++++.++..++. +++ + ..++
T Consensus 37 mkIaVIGl-----------------G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l 97 (432)
T 3pid_A 37 MKITISGT-----------------GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNF 97 (432)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCE
T ss_pred CEEEEECc-----------------CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCe
Confidence 47878888 777777776665467999999999988766541 111 1 1134
Q ss_pred EEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-----------chHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 189 KIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 189 ~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-----------~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
++. .|..+.+ ...|+||+-.+.. ......+.+.+ |+||.++|.......|
T Consensus 98 ~~t-td~~ea~---------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pg 158 (432)
T 3pid_A 98 RAT-TDKHDAY---------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVG 158 (432)
T ss_dssp EEE-SCHHHHH---------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTT
T ss_pred EEE-cCHHHHH---------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChH
Confidence 432 2332221 4579998876522 24556677778 9999888876555444
No 405
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.37 E-value=1.7 Score=34.76 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=59.7
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCCh-HHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDA-RSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~-~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++|+=+|+ |..+..+++.+. .+..|+.+|.++ +.++...+.. ...+.++.||+.+
T Consensus 3 ~~~vlI~G~-----------------G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~ 60 (153)
T 1id1_A 3 KDHFIVCGH-----------------SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSND 60 (153)
T ss_dssp CSCEEEECC-----------------SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTS
T ss_pred CCcEEEECC-----------------CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCC
Confidence 347888887 666666666653 356899999984 5444433322 2247888999864
Q ss_pred h--HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 198 S--LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~--l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
. +... + -...|.|++-.+............+.+.|...++.
T Consensus 61 ~~~l~~a---~-i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 61 SSVLKKA---G-IDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp HHHHHHH---T-TTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred HHHHHHc---C-hhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 2 3322 1 35789999876544434444445566666666665
No 406
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.29 E-value=1.2 Score=40.53 Aligned_cols=89 Identities=11% Similarity=0.005 Sum_probs=57.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-C-cEEEEEeCChH---HHHHHHHHHHHhCCCCcEEEEEc-c
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-S-GCLVACERDAR---SLEVAKKYYERAGVSHKVKIKHG-L 194 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~-~~v~~id~~~~---~~~~A~~~~~~~gl~~~v~~~~g-d 194 (294)
.+|-=||+ |..+..++..+.. + .+|+++|++++ ..+...+.+...|. .. +
T Consensus 25 m~IgvIG~-----------------G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s 80 (317)
T 4ezb_A 25 TTIAFIGF-----------------GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLD 80 (317)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEES
T ss_pred CeEEEECc-----------------cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCC
Confidence 47888998 7777777776643 4 58999999983 22222233334443 22 3
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+. ....|+||+-.+.....+.++.+.+.+++|.+++-
T Consensus 81 ~~e~---------~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 81 DVAG---------IACADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp SGGG---------GGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHH---------HhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 3333 24579999988766666677888888888876653
No 407
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.00 E-value=0.75 Score=42.69 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=47.1
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEE-EEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCL-VACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v-~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+++|+.||. |..++.+..+--+...+ .++|+++...+..+.|+... ++.+|..+...
T Consensus 12 ~vidLFaG~---------------GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~ 69 (327)
T 3qv2_A 12 NVIEFFSGI---------------GGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISI 69 (327)
T ss_dssp EEEEETCTT---------------THHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCH
T ss_pred EEEEECCCh---------------hHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCH
Confidence 677777777 76666666542112356 79999999998888887421 55677766533
Q ss_pred HHhhcCCCCceeEEEEcCC
Q 022597 201 ALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~ 219 (294)
.-.. ...+|+++..++
T Consensus 70 ~~i~---~~~~Dil~ggpP 85 (327)
T 3qv2_A 70 KQIE---SLNCNTWFMSPP 85 (327)
T ss_dssp HHHH---HTCCCEEEECCC
T ss_pred HHhc---cCCCCEEEecCC
Confidence 2111 136899987654
No 408
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.84 E-value=1.7 Score=41.91 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=55.7
Q ss_pred cHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHH------------HHHhCCCCcEEEEEcchhhhHHHHhhcCCCCcee
Q 022597 146 GYSSLAIALVLPE-SGCLVACERDARSLEVAKKY------------YERAGVSHKVKIKHGLAADSLKALILNGEASSYD 212 (294)
Q Consensus 146 G~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~------------~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD 212 (294)
|+.+..++..+.. +.+|+++|++++.++..++. +++.--..++++. .|..+. -...|
T Consensus 11 G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea---------~~~aD 80 (450)
T 3gg2_A 11 GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA---------VPEAD 80 (450)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH---------GGGCS
T ss_pred CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH---------HhcCC
Confidence 7777777766532 56899999999987765541 1000001234432 333222 14579
Q ss_pred EEEEcCCcc----------chHHHHHHHHhcccCCeEEEEecc
Q 022597 213 FAFVDAEKR----------MYQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 213 ~vfiD~~~~----------~~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+||+-.+.+ ...+.++.+.+.|++|.+++....
T Consensus 81 vViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 81 IIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 999876533 466777888889998887776544
No 409
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.59 E-value=0.96 Score=36.36 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=56.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..++|+=+|+ |..+..++..+. .+.+|+.+|.+++.++.+++ .. .+.++.+|..+
T Consensus 18 ~~~~v~IiG~-----------------G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~ 73 (155)
T 2g1u_A 18 KSKYIVIFGC-----------------GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAE 73 (155)
T ss_dssp CCCEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTS
T ss_pred CCCcEEEECC-----------------CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCC
Confidence 4568999998 555555555542 25689999999986543221 11 24566677643
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
. ..+... ....+|+||+-.+..........+.+.+.+...++.
T Consensus 74 ~-~~l~~~-~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 74 F-ETLKEC-GMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp H-HHHHTT-TGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred H-HHHHHc-CcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 2 222111 124689999877654444444444454555555554
No 410
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.27 E-value=3.4 Score=30.56 Aligned_cols=80 Identities=23% Similarity=0.156 Sum_probs=49.4
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CC-cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh-
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ES-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD- 197 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~-~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~- 197 (294)
++|+=+|+ |..+..++..+. .+ .+|+.+|.+++..+.+. . ..+++...|..+
T Consensus 6 ~~v~I~G~-----------------G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~ 60 (118)
T 3ic5_A 6 WNICVVGA-----------------GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDE 60 (118)
T ss_dssp EEEEEECC-----------------SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCH
T ss_pred CeEEEECC-----------------CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCH
Confidence 47888898 445555554442 24 68999999998765543 1 245667777654
Q ss_pred -hHHHHhhcCCCCceeEEEEcCCccchHHHHHHH
Q 022597 198 -SLKALILNGEASSYDFAFVDAEKRMYQEYFELL 230 (294)
Q Consensus 198 -~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~ 230 (294)
.+... -..+|.||.-.+......+.+.+
T Consensus 61 ~~~~~~-----~~~~d~vi~~~~~~~~~~~~~~~ 89 (118)
T 3ic5_A 61 AGLAKA-----LGGFDAVISAAPFFLTPIIAKAA 89 (118)
T ss_dssp HHHHHH-----TTTCSEEEECSCGGGHHHHHHHH
T ss_pred HHHHHH-----HcCCCEEEECCCchhhHHHHHHH
Confidence 23333 25789999887654444444433
No 411
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.83 E-value=2.2 Score=36.13 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=67.7
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 201 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~ 201 (294)
-|||+|-|+ |-.=-.+...+| +-.|+.+|.--.... .-..+.-.++.||+.+.++.
T Consensus 43 pVlElGLGN---------------GRTydHLRe~~P-~R~I~vfDR~~~~hp--------~~~P~~e~~ilGdi~~tL~~ 98 (174)
T 3iht_A 43 PVYELGLGN---------------GRTYHHLRQHVQ-GREIYVFERAVASHP--------DSTPPEAQLILGDIRETLPA 98 (174)
T ss_dssp CEEEECCTT---------------CHHHHHHHHHCC-SSCEEEEESSCCCCG--------GGCCCGGGEEESCHHHHHHH
T ss_pred ceEEecCCC---------------ChhHHHHHHhCC-CCcEEEEEeeeccCC--------CCCCchHheecccHHHHHHH
Confidence 699999999 988888888887 788999997443211 01223347899999999876
Q ss_pred HhhcCCCCceeEEEEcCCc---cc----hHHHHHHHHhcccCCeEEEEecccC
Q 022597 202 LILNGEASSYDFAFVDAEK---RM----YQEYFELLLQLIRVGGIIVIDNVLW 247 (294)
Q Consensus 202 l~~~~~~~~fD~vfiD~~~---~~----~~~~~~~~~~lLkpgG~ivid~vl~ 247 (294)
....- ..+.-++..|-+- +. ....-..+.++|.|||++|-+.-+.
T Consensus 99 ~~~r~-g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 99 TLERF-GATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp HHHHH-CSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred HHHhc-CCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 42210 3556666666542 21 1222234457999999999877663
No 412
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.82 E-value=1.9 Score=40.15 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=61.7
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHHH------hCCCCcEEEEEc
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYER------AGVSHKVKIKHG 193 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~~------~gl~~~v~~~~g 193 (294)
.+|.=||+ |..+..++..+.. +..|+.++.+++.++..++.-.. ..+..++++. .
T Consensus 30 mkI~VIGa-----------------G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~ 91 (356)
T 3k96_A 30 HPIAILGA-----------------GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-C 91 (356)
T ss_dssp SCEEEECC-----------------SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-S
T ss_pred CeEEEECc-----------------cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-C
Confidence 47888999 5566666665533 45799999999887665543110 1112234432 2
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
|..+. + ...|+||+-.+.....+.++.+.+.++++.+++
T Consensus 92 d~~ea---~------~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivv 130 (356)
T 3k96_A 92 DLKAS---L------EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIA 130 (356)
T ss_dssp CHHHH---H------TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEE
T ss_pred CHHHH---H------hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 33222 2 468999998887777888889999999887665
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.50 E-value=2.2 Score=37.46 Aligned_cols=79 Identities=14% Similarity=0.117 Sum_probs=51.4
Q ss_pred cHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchH
Q 022597 146 GYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQ 224 (294)
Q Consensus 146 G~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~ 224 (294)
|..+..++..+. .+.+|+++|.+++..+.++ +.|... .+ ..+..+. ...|+||+-.+.....
T Consensus 9 G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~----~~g~~~--~~-~~~~~~~----------~~~D~vi~av~~~~~~ 71 (279)
T 2f1k_A 9 GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV----ERQLVD--EA-GQDLSLL----------QTAKIIFLCTPIQLIL 71 (279)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG----------TTCSEEEECSCHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCCc--cc-cCCHHHh----------CCCCEEEEECCHHHHH
Confidence 555566655542 2458999999998776543 345432 11 2232221 3579999998877777
Q ss_pred HHHHHHHhcccCCeEEE
Q 022597 225 EYFELLLQLIRVGGIIV 241 (294)
Q Consensus 225 ~~~~~~~~lLkpgG~iv 241 (294)
+.++.+.+.+++|.+++
T Consensus 72 ~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 72 PTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHhhCCCCCEEE
Confidence 88888888888887654
No 414
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.31 E-value=4.5 Score=34.98 Aligned_cols=84 Identities=10% Similarity=-0.017 Sum_probs=52.6
Q ss_pred CCCeEEEEccc--cccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 119 GAQRCIEVGVY--TVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g--~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.++++|-.|++ . | .+..+++.+ ..+.+|+.++.+++..+.+.+..+..+- .++.++..|.
T Consensus 6 ~~k~vlVTGasg~~---------------G-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~ 68 (266)
T 3oig_A 6 EGRNIVVMGVANKR---------------S-IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDV 68 (266)
T ss_dssp TTCEEEEECCCSTT---------------S-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCC
T ss_pred CCCEEEEEcCCCCC---------------c-HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCC
Confidence 45688988876 3 3 444555544 2478999999998777777776665543 2688888887
Q ss_pred hhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 196 ADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 196 ~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
.+. ++.+...- ..+.+|.++..++
T Consensus 69 ~~~~~v~~~~~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 69 TNDAEIETCFASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp SSSHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCeeEEEEccc
Confidence 542 22221100 0257899887654
No 415
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.21 E-value=0.4 Score=44.21 Aligned_cols=103 Identities=15% Similarity=0.104 Sum_probs=57.1
Q ss_pred hhhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEE-EEeCChHHHHHHHHHHHHhCCCCcEEEEEc
Q 022597 116 QILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLV-ACERDARSLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 116 ~~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~-~id~~~~~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
++.++++||-+|+ |.+ |..++.+++.. +++++ +++.++...+ -++.+++.|... ++.
T Consensus 164 ~~~~g~~VlV~Ga~G~v--------------G~~aiqlak~~--Ga~vi~~~~~~~~~~~-~~~~~~~lGa~~---vi~- 222 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGV--------------GQAVIQIAAAL--GLRTINVVRDRPDIQK-LSDRLKSLGAEH---VIT- 222 (357)
T ss_dssp CCCTTCEEEESSTTSHH--------------HHHHHHHHHHH--TCEEEEEECCCSCHHH-HHHHHHHTTCSE---EEE-
T ss_pred ccCCCCEEEEeCCcCHH--------------HHHHHHHHHHc--CCEEEEEecCccchHH-HHHHHHhcCCcE---EEe-
Confidence 4456789999997 543 87888888876 45554 4555443211 123445567542 222
Q ss_pred chhhh-HHHHhhcCC-CCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEec
Q 022597 194 LAADS-LKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 194 da~~~-l~~l~~~~~-~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
..+. ...+.+... .+.+|+||-..+... ...+.+.|++||.++.-.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~----~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 223 -EEELRRPEMKNFFKDMPQPRLALNCVGGKS----STELLRQLARGGTMVTYG 270 (357)
T ss_dssp -HHHHHSGGGGGTTSSSCCCSEEEESSCHHH----HHHHHTTSCTTCEEEECC
T ss_pred -cCcchHHHHHHHHhCCCCceEEEECCCcHH----HHHHHHhhCCCCEEEEEe
Confidence 1110 011111111 125999986665322 235789999999998753
No 416
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.09 E-value=2.3 Score=38.49 Aligned_cols=94 Identities=13% Similarity=0.174 Sum_probs=59.2
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCC-------CCcEE--E
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGV-------SHKVK--I 190 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl-------~~~v~--~ 190 (294)
.+|.=||+ |..+..++..+. .+.+|+.+|.+++..+..++.. ++ ..... .
T Consensus 5 mki~iiG~-----------------G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 64 (359)
T 1bg6_A 5 KTYAVLGL-----------------GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDL 64 (359)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSE
T ss_pred CeEEEECC-----------------CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccce
Confidence 47888998 445555554442 2468999999998776554321 21 10000 1
Q ss_pred EEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 191 KHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 191 ~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
...+ +.+. ...+|+||+-.+.....+.++.+.+.+++|.+++..
T Consensus 65 ~~~~----~~~~-----~~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 65 LTSD----IGLA-----VKDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EESC----HHHH-----HTTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred ecCC----HHHH-----HhcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 1122 2222 146899999888777788888888999998876654
No 417
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.09 E-value=1.7 Score=41.55 Aligned_cols=93 Identities=18% Similarity=0.158 Sum_probs=62.5
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh-
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS- 198 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~- 198 (294)
.+|+=+|+ |..+..+++.+. .+..|+.+|.|++.++.+++ .| +.++.||+.+.
T Consensus 5 ~~viIiG~-----------------Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~ 59 (413)
T 3l9w_A 5 MRVIIAGF-----------------GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMD 59 (413)
T ss_dssp CSEEEECC-----------------SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHH
T ss_pred CeEEEECC-----------------CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHH
Confidence 47899998 556666666553 35789999999998876653 33 56788998653
Q ss_pred -HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 199 -LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 199 -l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
+... + -...|.|++-.+........-...+.+.|+..+++
T Consensus 60 ~L~~a---g-i~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 60 LLESA---G-AAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp HHHHT---T-TTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHhc---C-CCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 3332 2 46789998876644433444444566778766665
No 418
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.03 E-value=3.8 Score=36.41 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=60.7
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHh---------CCC-----
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERA---------GVS----- 185 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~---------gl~----- 185 (294)
++|.=||+| ..+..++..+. .+.+|+.+|++++.++.+++.++.. ++.
T Consensus 5 ~kV~VIGaG-----------------~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~ 67 (283)
T 4e12_A 5 TNVTVLGTG-----------------VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQ 67 (283)
T ss_dssp CEEEEECCS-----------------HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHH
T ss_pred CEEEEECCC-----------------HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 478888885 45555554432 2579999999999988887764321 121
Q ss_pred ---CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc--chHHHHHHHHhcccCCeEEEEec
Q 022597 186 ---HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR--MYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 186 ---~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~--~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
.+++. ..+..+. -...|+|++..+.. ....+++.+.+.++|+.++ ++|
T Consensus 68 ~~~~~i~~-~~~~~~~---------~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~ 120 (283)
T 4e12_A 68 KALGGIRY-SDDLAQA---------VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATN 120 (283)
T ss_dssp HHHHHCEE-ESCHHHH---------TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EEC
T ss_pred HHHcCeEE-eCCHHHH---------hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EEC
Confidence 12232 1222221 25689999887643 5677888888889888765 444
No 419
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.96 E-value=4.1 Score=36.91 Aligned_cols=95 Identities=17% Similarity=0.085 Sum_probs=61.4
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
.++++=+|+ |..+..+++.+...+.++.+|.|++.++ +++ ..+.++.||+.+.
T Consensus 115 ~~~viI~G~-----------------G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~- 167 (336)
T 1lnq_A 115 SRHVVICGW-----------------SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRV- 167 (336)
T ss_dssp -CEEEEESC-----------------CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSH-
T ss_pred cCCEEEECC-----------------cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCH-
Confidence 358999887 7777888887754333999999999876 543 2478999998653
Q ss_pred HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 200 KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+...+ -+..|.+++-.+.....-..-...+.+.|...++.
T Consensus 168 ~~L~~a~-i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 168 SDLEKAN-VRGARAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHTC-STTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHhcC-hhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 2222222 46799998876543322333334566777766655
No 420
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.75 E-value=2.4 Score=39.64 Aligned_cols=90 Identities=9% Similarity=0.130 Sum_probs=59.8
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
..+|-=||+ |..+..++..+. .+..|+++|++++..+.+. ..|.. . ..+..+.
T Consensus 22 ~mkIgiIGl-----------------G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~----~~g~~----~-~~s~~e~ 75 (358)
T 4e21_A 22 SMQIGMIGL-----------------GRMGADMVRRLRKGGHECVVYDLNVNAVQALE----REGIA----G-ARSIEEF 75 (358)
T ss_dssp CCEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----TTTCB----C-CSSHHHH
T ss_pred CCEEEEECc-----------------hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH----HCCCE----E-eCCHHHH
Confidence 357888998 667777766653 2568999999998765443 22331 1 2233333
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
+.. ....|+||+-.+.....+.++.+.+.|++|.+|+
T Consensus 76 ~~~------a~~~DvVi~~vp~~~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 76 CAK------LVKPRVVWLMVPAAVVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp HHH------SCSSCEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred Hhc------CCCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 332 2456999988776677778888888898887655
No 421
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.68 E-value=0.57 Score=40.87 Aligned_cols=86 Identities=14% Similarity=0.203 Sum_probs=54.4
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCC-Cc----EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SG----CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~----~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+|.=||+ |..+..++..+.. +. +|+.+|++++..+.+.+. .|. ++ ..+..
T Consensus 4 ~i~iIG~-----------------G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~---~g~----~~-~~~~~ 58 (247)
T 3gt0_A 4 QIGFIGC-----------------GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK---YGL----TT-TTDNN 58 (247)
T ss_dssp CEEEECC-----------------SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH---HCC----EE-CSCHH
T ss_pred eEEEECc-----------------cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH---hCC----EE-eCChH
Confidence 6777888 5566666655432 22 899999999877655432 243 22 22333
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
+.+ ...|+||+-.+.....+.++.+.+.+++|.+++
T Consensus 59 e~~---------~~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 59 EVA---------KNADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HHH---------HHCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred HHH---------HhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 322 347999998876777888888888888887665
No 422
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.19 E-value=4.7 Score=35.01 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=52.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++|-.|++. ..+.++++.+ ..+.+|+.++.+++.++...+.+ ..++.++..|..
T Consensus 6 l~gk~~lVTGas~----------------gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~ 64 (255)
T 4eso_A 6 YQGKKAIVIGGTH----------------GMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIA 64 (255)
T ss_dssp TTTCEEEEETCSS----------------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTT
T ss_pred CCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCC
Confidence 3567899888764 4566666665 34789999999998776555443 246888888876
Q ss_pred hh--HHHHhhc--CCCCceeEEEEcCC
Q 022597 197 DS--LKALILN--GEASSYDFAFVDAE 219 (294)
Q Consensus 197 ~~--l~~l~~~--~~~~~fD~vfiD~~ 219 (294)
+. +..+.+. ...+.+|.++..++
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (255)
T 4eso_A 65 DLNEIAVLGAAAGQTLGAIDLLHINAG 91 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 52 2222110 01258999987754
No 423
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.90 E-value=4.6 Score=38.02 Aligned_cols=82 Identities=9% Similarity=0.162 Sum_probs=52.5
Q ss_pred cHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCC--------------CCcEEEEEcchhhhHHHHhhcCCCCce
Q 022597 146 GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV--------------SHKVKIKHGLAADSLKALILNGEASSY 211 (294)
Q Consensus 146 G~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl--------------~~~v~~~~gda~~~l~~l~~~~~~~~f 211 (294)
|+.+..++..+..+.+|+++|++++.++..++ .+. ..++++ ..+..+.+ ...
T Consensus 9 G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~----~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~---------~~a 74 (402)
T 1dlj_A 9 GYVGLSLGVLLSLQNEVTIVDILPSKVDKINN----GLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAY---------KEA 74 (402)
T ss_dssp SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHT----TCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH---------HHC
T ss_pred CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHc----CCCCcCCCCHHHHHHhccCcEEE-eCCHHHHh---------cCC
Confidence 77888888777556689999999987765432 221 112332 22322222 347
Q ss_pred eEEEEcCCcc-----------chHHHHHHHHhcccCCeEEEE
Q 022597 212 DFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 212 D~vfiD~~~~-----------~~~~~~~~~~~lLkpgG~ivi 242 (294)
|+||+-.+.. ...+.++.+.+ +++|.+++.
T Consensus 75 Dvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 75 ELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp SEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred CEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 9999876543 36677777888 899888776
No 424
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.49 E-value=1.4 Score=43.33 Aligned_cols=89 Identities=11% Similarity=0.087 Sum_probs=57.9
Q ss_pred hhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 117 ILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 117 ~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
...+++|+=+|+|.+ |......++.. +.+|+++|++++..+.|+ ..|. ++ .+..
T Consensus 271 ~l~GktV~IiG~G~I--------------G~~~A~~lka~--Ga~Viv~d~~~~~~~~A~----~~Ga----~~--~~l~ 324 (494)
T 3ce6_A 271 LIGGKKVLICGYGDV--------------GKGCAEAMKGQ--GARVSVTEIDPINALQAM----MEGF----DV--VTVE 324 (494)
T ss_dssp CCTTCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTC----EE--CCHH
T ss_pred CCCcCEEEEEccCHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCC----EE--ecHH
Confidence 356789999999765 66666666665 479999999998776554 3454 22 1222
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
+ + -...|+|+...+..... -....+.+++||+++-
T Consensus 325 e----~-----l~~aDvVi~atgt~~~i--~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 325 E----A-----IGDADIVVTATGNKDII--MLEHIKAMKDHAILGN 359 (494)
T ss_dssp H----H-----GGGCSEEEECSSSSCSB--CHHHHHHSCTTCEEEE
T ss_pred H----H-----HhCCCEEEECCCCHHHH--HHHHHHhcCCCcEEEE
Confidence 2 2 14689999876533311 1245677899998874
No 425
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.49 E-value=5.2 Score=36.18 Aligned_cols=96 Identities=18% Similarity=0.247 Sum_probs=50.0
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHH-hCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER-AGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~-~gl~~~v~~~~gda~~~l~ 200 (294)
+|.=||+|.+ |......+...+...+|+.+|++++.++.....+.. ..+...+++..++..+
T Consensus 2 kI~VIGaG~v--------------G~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a--- 64 (304)
T 2v6b_A 2 KVGVVGTGFV--------------GSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSE--- 64 (304)
T ss_dssp EEEEECCSHH--------------HHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGG---
T ss_pred EEEEECCCHH--------------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHH---
Confidence 5777898763 433322222222123899999999866532222221 1111234444344322
Q ss_pred HHhhcCCCCceeEEEEcCCccc----------------hHHHHHHHHhcccCCeEEEE
Q 022597 201 ALILNGEASSYDFAFVDAEKRM----------------YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~~~~----------------~~~~~~~~~~lLkpgG~ivi 242 (294)
+ ...|+|++-.+.+. ..++++.+.+. .|++++++
T Consensus 65 -~------~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 65 -L------ADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp -G------TTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred -h------CCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 46799998764211 24555555565 68998765
No 426
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.48 E-value=6.3 Score=35.40 Aligned_cols=83 Identities=27% Similarity=0.236 Sum_probs=53.5
Q ss_pred hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 116 QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 116 ~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
+.++++.+|-.|.+. | .+.++++.+ ..+++|+.++++++.++.+.+ +.| .++..+.+|
T Consensus 25 ~rL~gKvalVTGas~---------------G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g--~~~~~~~~D 83 (273)
T 4fgs_A 25 QRLNAKIAVITGATS---------------G-IGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIG--GGAVGIQAD 83 (273)
T ss_dssp CTTTTCEEEEESCSS---------------H-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHC--TTCEEEECC
T ss_pred chhCCCEEEEeCcCC---------------H-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcC--CCeEEEEec
Confidence 346788999999876 5 556666655 347899999999988765543 333 356777788
Q ss_pred hhhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 195 AADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 195 a~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
..+. ++.+.+.- ..++.|.++.+++
T Consensus 84 v~~~~~v~~~~~~~~~~~G~iDiLVNNAG 112 (273)
T 4fgs_A 84 SANLAELDRLYEKVKAEAGRIDVLFVNAG 112 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6542 22221110 1378999987754
No 427
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=86.38 E-value=11 Score=33.27 Aligned_cols=84 Identities=18% Similarity=0.118 Sum_probs=53.0
Q ss_pred hCCCeEEEEccccccccccccccccCCCc-HHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG-~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++|-.|.+. | ..+.++++.+ ..+.+|+.++.+++..+.+++..+..+ ++.++..|.
T Consensus 29 l~gk~~lVTGasg---------------~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv 90 (293)
T 3grk_A 29 LQGKRGLILGVAN---------------NRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDV 90 (293)
T ss_dssp TTTCEEEEECCCS---------------SSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCT
T ss_pred CCCCEEEEEcCCC---------------CCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCC
Confidence 4667899999762 2 1444555444 236899999999877666666666554 478888887
Q ss_pred hhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 196 ADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 196 ~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
.+. +..+.+.- ..+.+|.++..++
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 542 22222110 1357999987764
No 428
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.34 E-value=2.2 Score=37.71 Aligned_cols=90 Identities=10% Similarity=0.138 Sum_probs=56.8
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE--------
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-------- 192 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~-------- 192 (294)
+|.=||+ |..+..++..+. .+.+|+.+|.+++..+..++ .|+ ++..
T Consensus 5 ~i~iiG~-----------------G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~g~----~~~~~~~~~~~~ 59 (316)
T 2ew2_A 5 KIAIAGA-----------------GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK----NGL----IADFNGEEVVAN 59 (316)
T ss_dssp EEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----HCE----EEEETTEEEEEC
T ss_pred eEEEECc-----------------CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----CCE----EEEeCCCeeEec
Confidence 7888998 555555555442 24689999999987665443 232 1111
Q ss_pred ---cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 193 ---GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 193 ---gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.+..+.... -..+|+||+-.+.....+.++.+.+.++++.+++.
T Consensus 60 ~~~~~~~~~~~~------~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 60 LPIFSPEEIDHQ------NEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CCEECGGGCCTT------SCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ceeecchhhccc------CCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 011111000 12789999988776778888888888988876654
No 429
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.33 E-value=2.4 Score=37.42 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=57.1
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC---CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP---ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~---~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+|.=||+ |..+..++..+. .+.+|+++|.+++..+.+++ .|... . ...+..+
T Consensus 7 ~~I~iIG~-----------------G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~ 62 (290)
T 3b1f_A 7 KTIYIAGL-----------------GLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD--E-ATADFKV 62 (290)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS--E-EESCTTT
T ss_pred ceEEEEee-----------------CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc--c-ccCCHHH
Confidence 47888998 555555554432 24689999999987765433 44422 1 1223322
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhc-ccCCeEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQL-IRVGGIIV 241 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~l-LkpgG~iv 241 (294)
. ....|+||+-.+.....+.++.+.+. +++|.+++
T Consensus 63 ~---------~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 63 F---------AALADVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp T---------GGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred h---------hcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 2 14689999998877778888888888 88876655
No 430
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.33 E-value=4.5 Score=34.15 Aligned_cols=86 Identities=16% Similarity=0.094 Sum_probs=54.0
Q ss_pred cHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh--HHHHhhcCCCCceeEEEEcCCccc
Q 022597 146 GYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYDFAFVDAEKRM 222 (294)
Q Consensus 146 G~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~--l~~l~~~~~~~~fD~vfiD~~~~~ 222 (294)
|..+..+++.+. .+..|+.+|.+++.++...+ .. .+.++.||+.+. +... + -...|.|++-.+...
T Consensus 9 G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~----~~~~i~gd~~~~~~l~~a---~-i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 9 ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KL----KATIIHGDGSHKEILRDA---E-VSKNDVVVILTPRDE 77 (218)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HS----SSEEEESCTTSHHHHHHH---T-CCTTCEEEECCSCHH
T ss_pred CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---Hc----CCeEEEcCCCCHHHHHhc---C-cccCCEEEEecCCcH
Confidence 666667666653 35789999999997764332 22 257889998653 3322 1 357899998776544
Q ss_pred hHHHHHHHHhcccCCeEEEE
Q 022597 223 YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 223 ~~~~~~~~~~lLkpgG~ivi 242 (294)
.........+.+.+...++.
T Consensus 78 ~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 78 VNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEE
Confidence 44444444555556666654
No 431
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.31 E-value=6 Score=35.37 Aligned_cols=94 Identities=14% Similarity=0.166 Sum_probs=49.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCc--EEEEEeCChHHHHH-HHHHHHHhCCCCcEEEEEc-ch
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESG--CLVACERDARSLEV-AKKYYERAGVSHKVKIKHG-LA 195 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~--~v~~id~~~~~~~~-A~~~~~~~gl~~~v~~~~g-da 195 (294)
.+|.=||+|.+ | ..++..+. .+. +|+.+|.+++.++. +.+.-+...+....++... +.
T Consensus 8 mkI~IiGaG~v--------------G---~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 70 (319)
T 1lld_A 8 TKLAVIGAGAV--------------G---STLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP 70 (319)
T ss_dssp CEEEEECCSHH--------------H---HHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG
T ss_pred CEEEEECCCHH--------------H---HHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH
Confidence 48999999653 3 33332221 123 89999999876652 2221111111113444433 32
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccc----------------hHHHHHHHHhcccCCeEEEE
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRM----------------YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~----------------~~~~~~~~~~lLkpgG~ivi 242 (294)
+. ....|+||+-..... ..+.++.+.+. .|+++++.
T Consensus 71 -~~---------~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 71 -EI---------CRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp -GG---------GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred -HH---------hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 21 246899998763211 12555566554 78887764
No 432
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.88 E-value=9.8 Score=33.02 Aligned_cols=106 Identities=18% Similarity=0.170 Sum_probs=65.9
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCC------------hHHHHHHHHHHHHhCCC
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERD------------ARSLEVAKKYYERAGVS 185 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~------------~~~~~~A~~~~~~~gl~ 185 (294)
.++++|-.|++. ..+.++++.+ ..+.+|+.++.+ .+.++.+.+.++..+
T Consensus 9 ~gk~vlVTGas~----------------gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 70 (287)
T 3pxx_A 9 QDKVVLVTGGAR----------------GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-- 70 (287)
T ss_dssp TTCEEEEETTTS----------------HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--
T ss_pred CCCEEEEeCCCC----------------hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--
Confidence 457889888864 4566666655 346899999987 666766666666654
Q ss_pred CcEEEEEcchhhh--HHHHhhcC--CCCceeEEEEcCCc---------cchH-----------HHHHHHHhcccCCeEEE
Q 022597 186 HKVKIKHGLAADS--LKALILNG--EASSYDFAFVDAEK---------RMYQ-----------EYFELLLQLIRVGGIIV 241 (294)
Q Consensus 186 ~~v~~~~gda~~~--l~~l~~~~--~~~~fD~vfiD~~~---------~~~~-----------~~~~~~~~lLkpgG~iv 241 (294)
.++.++..|..+. +..+...- ..+.+|.++..++. +.+. ...+.+.+.++++|.||
T Consensus 71 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 71 RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 4688998887642 22221100 02579999877541 1122 23344567777777766
Q ss_pred E
Q 022597 242 I 242 (294)
Q Consensus 242 i 242 (294)
.
T Consensus 151 ~ 151 (287)
T 3pxx_A 151 T 151 (287)
T ss_dssp E
T ss_pred E
Confidence 4
No 433
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.76 E-value=8.5 Score=33.50 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=54.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCc-HHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSG-YSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG-~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+.+|++|-.|.+. + ..+.++++.+. .+++|+.++++++..+.+.+.+++.+- .++.++..|.
T Consensus 4 l~gK~alVTGaa~---------------~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv 67 (256)
T 4fs3_A 4 LENKTYVIMGIAN---------------KRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDV 67 (256)
T ss_dssp CTTCEEEEECCCS---------------TTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCT
T ss_pred CCCCEEEEECCCC---------------CchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccC
Confidence 3577899988531 1 24455555542 478999999999988888888877653 3577888886
Q ss_pred hhh--HHHHhhc--CCCCceeEEEEcCC
Q 022597 196 ADS--LKALILN--GEASSYDFAFVDAE 219 (294)
Q Consensus 196 ~~~--l~~l~~~--~~~~~fD~vfiD~~ 219 (294)
.+. +..+.+. ...+..|.++.+++
T Consensus 68 ~~~~~v~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 68 QSDEEVINGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp TCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEeccc
Confidence 532 1221110 01368999887653
No 434
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=85.64 E-value=5.4 Score=35.97 Aligned_cols=85 Identities=12% Similarity=0.027 Sum_probs=59.2
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.+++||=.|++. ..+.++++.+ ..+.+|+.++.+++..+.+.+.++..+...++.++..|..+
T Consensus 7 ~~k~vlVTGas~----------------gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 7 AGRTAFVTGGAN----------------GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp TTCEEEEETTTS----------------THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCCEEEEcCCch----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 456888888864 4566666665 34789999999999988888888777665579999988765
Q ss_pred h--HHHHhhc--CCCCceeEEEEcCC
Q 022597 198 S--LKALILN--GEASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~--~~~~~fD~vfiD~~ 219 (294)
. +..+... ...+.+|.++..++
T Consensus 71 ~~~v~~~~~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 71 REGFKMAADEVEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 2 2222110 01367999998765
No 435
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.61 E-value=7.1 Score=35.79 Aligned_cols=96 Identities=9% Similarity=0.046 Sum_probs=61.2
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHH-------HhCCCC------
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYE-------RAGVSH------ 186 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~-------~~gl~~------ 186 (294)
++|-=||+|+ .+..++..+. .+..|+..|++++.++.+++.++ +.|+..
T Consensus 7 ~kI~vIGaG~-----------------MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~ 69 (319)
T 2dpo_A 7 GDVLIVGSGL-----------------VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAE 69 (319)
T ss_dssp CEEEEECCSH-----------------HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHH
T ss_pred ceEEEEeeCH-----------------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchH
Confidence 4788889854 4444444432 25689999999999888876543 234321
Q ss_pred ----cEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc--chHHHHHHHHhcccCCeEEEEec
Q 022597 187 ----KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR--MYQEYFELLLQLIRVGGIIVIDN 244 (294)
Q Consensus 187 ----~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~--~~~~~~~~~~~lLkpgG~ivid~ 244 (294)
++++. .+..+. -...|+||+-.+.. -...+|+.+.+.++||.+++ ++
T Consensus 70 ~~~~~i~~~-~~~~ea---------v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~ 122 (319)
T 2dpo_A 70 EQLSLISSC-TNLAEA---------VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLS-SS 122 (319)
T ss_dssp HHHHTEEEE-CCHHHH---------TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEE-EC
T ss_pred HHhhceEEe-CCHHHH---------HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEE-Ee
Confidence 24442 232222 35789999987632 34678888889999887654 44
No 436
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=85.46 E-value=2.4 Score=49.42 Aligned_cols=103 Identities=10% Similarity=0.081 Sum_probs=67.1
Q ss_pred hhCCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 117 ILGAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 117 ~~~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
+.++++||-.|. |.+ |..++.+++.. +++|++++.+++..+.+++.+...|..+ ++....
T Consensus 1665 l~~Ge~VLI~gaaGgV--------------G~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~~---v~~~~~ 1725 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGV--------------GQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDETC---FANSRD 1725 (2512)
T ss_dssp CCTTCEEEETTTTSHH--------------HHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCSTT---EEESSS
T ss_pred CCCCCEEEEEeCChHH--------------HHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCceE---EecCCC
Confidence 456789998874 543 77777888876 5799999999988777766443334432 222222
Q ss_pred hhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 196 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 196 ~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.+..+.+........+|+||--.. .+.++..++.|++||.++.
T Consensus 1726 ~~~~~~i~~~t~g~GvDvVld~~g----~~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1726 TSFEQHVLRHTAGKGVDLVLNSLA----EEKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp SHHHHHHHHTTTSCCEEEEEECCC----HHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCceEEEECCC----chHHHHHHHhcCCCcEEEE
Confidence 233333322222346999986543 4568889999999999875
No 437
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.45 E-value=7.5 Score=34.61 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=58.0
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHH-------hCCC-------
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYER-------AGVS------- 185 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~-------~gl~------- 185 (294)
++|.=||+|. .+..++..+. .+..|+.+|.+++.++.+++.+++ .|.-
T Consensus 16 ~~I~VIG~G~-----------------mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~ 78 (302)
T 1f0y_A 16 KHVTVIGGGL-----------------MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGD 78 (302)
T ss_dssp CEEEEECCSH-----------------HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred CEEEEECCCH-----------------HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccch
Confidence 4788899954 4444444432 256899999999998877654432 2321
Q ss_pred -------CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc--hHHHHHHHHhcccCCeEEE
Q 022597 186 -------HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--YQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 186 -------~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~--~~~~~~~~~~lLkpgG~iv 241 (294)
.++++. .|..+ . -...|+||+-.+... ...+++.+.+.++++.+++
T Consensus 79 ~~~~~~~~~i~~~-~~~~~---~------~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 79 EFVEKTLSTIATS-TDAAS---V------VHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHHHHHHHTEEEE-SCHHH---H------TTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred hhHHHHHhceEEe-cCHHH---h------hcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEE
Confidence 124432 22221 1 256899998775332 4577888888888887654
No 438
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.37 E-value=1.2 Score=41.86 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=33.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
.+++|+=+|+|.+ |.....+++.++ .+|+.+|.+++..+.+++
T Consensus 171 ~g~~V~ViGaG~i--------------G~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVA--------------GLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHH--------------HHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 5789999999864 777777777764 689999999887666543
No 439
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.28 E-value=7.2 Score=34.64 Aligned_cols=84 Identities=13% Similarity=0.045 Sum_probs=52.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|-.|.+.+ ...+.++++.+ ..+.+|+.++.+++..+.+.+..+..+ ++.++..|..+
T Consensus 29 ~~k~vlVTGasg~--------------~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d 91 (296)
T 3k31_A 29 EGKKGVIIGVAND--------------KSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSD 91 (296)
T ss_dssp TTCEEEEECCCST--------------TSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTC
T ss_pred CCCEEEEEeCCCC--------------CCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCC
Confidence 4568999887410 14455555554 237899999999877776666666654 35777888754
Q ss_pred h--HHHHhhcC--CCCceeEEEEcCC
Q 022597 198 S--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
. ++.+.+.- ..+.+|.++..++
T Consensus 92 ~~~v~~~~~~~~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 92 AESVDNMFKVLAEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 2 22221110 0257999987764
No 440
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.25 E-value=1.8 Score=38.76 Aligned_cols=87 Identities=14% Similarity=0.130 Sum_probs=56.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-C---cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-S---GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~---~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
++|-=||+ |..+..++..+.. + .+|+.+|++++..+.+.+. .| +++ ..+..
T Consensus 4 ~~I~iIG~-----------------G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~ 58 (280)
T 3tri_A 4 SNITFIGG-----------------GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNR 58 (280)
T ss_dssp SCEEEESC-----------------SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHH
T ss_pred CEEEEEcc-----------------cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChH
Confidence 46778899 4455555554422 2 2799999999877655442 23 333 22332
Q ss_pred hhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhc-ccCCeEEE
Q 022597 197 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQL-IRVGGIIV 241 (294)
Q Consensus 197 ~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~l-LkpgG~iv 241 (294)
+. + ...|+||+-.......+.++.+.+. ++++-+++
T Consensus 59 ~~---~------~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 59 QG---A------LNADVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp HH---H------SSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred HH---H------hcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 22 2 4679999998777788899998888 87765554
No 441
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.65 E-value=8.5 Score=37.06 Aligned_cols=104 Identities=16% Similarity=0.242 Sum_probs=63.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHH------------HHHhCCC
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKY------------YERAGVS 185 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~------------~~~~gl~ 185 (294)
+.-++-=||. |+.++.+|..+.. +-+|+++|++++.++..++. +++.-..
T Consensus 7 ~~~~~~vIGl-----------------G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~ 69 (446)
T 4a7p_A 7 GSVRIAMIGT-----------------GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKA 69 (446)
T ss_dssp CCCEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHT
T ss_pred CceEEEEEcC-----------------CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhccc
Confidence 4457778888 7788877776643 56899999999987655431 0000001
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-----------chHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-----------~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
.++++. .|..+.+ ...|+||+-.+.+ ...+.++.+.+.|++|.++|.......|
T Consensus 70 g~l~~t-td~~ea~---------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 134 (446)
T 4a7p_A 70 GRLSFT-TDLAEGV---------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVG 134 (446)
T ss_dssp TCEEEE-SCHHHHH---------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTT
T ss_pred CCEEEE-CCHHHHH---------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCch
Confidence 234432 3332221 4579998874422 2566777888899999888765543333
No 442
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=84.07 E-value=11 Score=33.38 Aligned_cols=106 Identities=15% Similarity=0.212 Sum_probs=64.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHH-HHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARS-LEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~-~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
.++++|-.|.+ |..+.++++.+. .+.+|+.++.+++. .+...+.++..| .++.++.+|..
T Consensus 46 ~gk~vlVTGas----------------~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~ 107 (291)
T 3ijr_A 46 KGKNVLITGGD----------------SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLS 107 (291)
T ss_dssp TTCEEEEETTT----------------SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTT
T ss_pred CCCEEEEeCCC----------------cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCC
Confidence 45689988876 445666666653 46899999998763 444555555544 46889998876
Q ss_pred hh--HHHHhhcC--CCCceeEEEEcCCc------------cch-----------HHHHHHHHhcccCCeEEEE
Q 022597 197 DS--LKALILNG--EASSYDFAFVDAEK------------RMY-----------QEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 197 ~~--l~~l~~~~--~~~~fD~vfiD~~~------------~~~-----------~~~~~~~~~lLkpgG~ivi 242 (294)
+. ++.+...- ..+.+|.++..++. +.+ ....+.+.+.++++|.||.
T Consensus 108 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 108 DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp SHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 52 22221100 02578999876531 111 2334455677888887664
No 443
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.96 E-value=5.4 Score=34.76 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=57.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+++|-.|+. |..+..+++.+. .+.+|+.++.+++..+...+.++..|...++.++.+|..+
T Consensus 31 ~~k~vlVTGas----------------ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 31 RDRLALVTGAS----------------GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp TTCEEEEESTT----------------SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCCEEEEECCC----------------chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 45688888875 566677666552 4689999999998887777777777766678888888754
Q ss_pred h--HHHHhhcC--CCCceeEEEEcCC
Q 022597 198 S--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
. +..+...- ..+.+|.+|..++
T Consensus 95 ~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 95 EEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 2 22221100 0247899987654
No 444
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=83.85 E-value=3.8 Score=37.46 Aligned_cols=98 Identities=15% Similarity=0.104 Sum_probs=50.7
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH-HHHHHHHhCCCCcEEEEEcchhhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV-AKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~-A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
+.+|.=||+|.+ |+.........+...+|+.+|++++.++- +....+...+...+++..++..+
T Consensus 7 ~~KI~IiGaG~v--------------G~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a- 71 (318)
T 1y6j_A 7 RSKVAIIGAGFV--------------GASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSD- 71 (318)
T ss_dssp CCCEEEECCSHH--------------HHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGG-
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHH-
Confidence 457888999764 54433333332223589999999876552 22221211122356666544322
Q ss_pred HHHHhhcCCCCceeEEEEcCCccc----------------hHHHHHHHHhcccCCeEEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRM----------------YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~----------------~~~~~~~~~~lLkpgG~ivi 242 (294)
+ ...|+|++-++.+. ..++.+.+.+. .|++++++
T Consensus 72 ---~------~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv 121 (318)
T 1y6j_A 72 ---V------KDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILV 121 (318)
T ss_dssp ---G------TTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEE
T ss_pred ---h------CCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEE
Confidence 1 46799998765211 13333333344 69999887
No 445
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.84 E-value=8.8 Score=32.88 Aligned_cols=84 Identities=18% Similarity=0.087 Sum_probs=53.1
Q ss_pred hCCCeEEEEccc-cccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEVGVY-TVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g-~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
...++||=.|+. + |..+..+++.+ ..+.+|+.++.+.+..+.+++..+..+ ++.++..|.
T Consensus 12 ~~~k~vlITGa~~~---------------~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv 73 (271)
T 3ek2_A 12 LDGKRILLTGLLSN---------------RSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDV 73 (271)
T ss_dssp TTTCEEEECCCCST---------------TSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCT
T ss_pred cCCCEEEEeCCCCC---------------CcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCC
Confidence 356799999975 2 33455555554 246899999999776666666666544 377888887
Q ss_pred hhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 196 ADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 196 ~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
.+. ++.+...- ..++.|.++..++
T Consensus 74 ~~~~~v~~~~~~~~~~~g~id~lv~nAg 101 (271)
T 3ek2_A 74 ADDAQIDALFASLKTHWDSLDGLVHSIG 101 (271)
T ss_dssp TCHHHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 542 22221100 1368999987654
No 446
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.59 E-value=3.7 Score=35.68 Aligned_cols=87 Identities=11% Similarity=0.068 Sum_probs=54.9
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcE-EEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~-v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
.+|.=||+| ..+..++..+.. +.+ |+.+|.+++..+.+.+. .|. .+ ..+..+.
T Consensus 11 m~i~iiG~G-----------------~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~---~g~----~~-~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAG-----------------NLATNLAKALYRKGFRIVQVYSRTEESARELAQK---VEA----EY-TTDLAEV 65 (266)
T ss_dssp CCEEEECCS-----------------HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH---TTC----EE-ESCGGGS
T ss_pred CeEEEEcCC-----------------HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH---cCC----ce-eCCHHHH
Confidence 478888985 445555444321 345 88999999876654432 232 22 2333222
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
....|+||+-.+.....+.++.+.+.+++|.+++
T Consensus 66 ---------~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv 99 (266)
T 3d1l_A 66 ---------NPYAKLYIVSLKDSAFAELLQGIVEGKREEALMV 99 (266)
T ss_dssp ---------CSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred ---------hcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEE
Confidence 2468999998876666788888888888876554
No 447
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.19 E-value=6.4 Score=34.75 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=54.9
Q ss_pred CeEEEEcc-ccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 121 QRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 121 ~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
.+|.=||+ |. .+..++..+. .+.+|+.+|.+++..+.+++ .|+. + .+..+.
T Consensus 12 m~I~iIG~tG~-----------------mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g~~----~--~~~~~~ 64 (286)
T 3c24_A 12 KTVAILGAGGK-----------------MGARITRKIHDSAHHLAAIEIAPEGRDRLQG----MGIP----L--TDGDGW 64 (286)
T ss_dssp CEEEEETTTSH-----------------HHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----TTCC----C--CCSSGG
T ss_pred CEEEEECCCCH-----------------HHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----cCCC----c--CCHHHH
Confidence 37888999 76 3333333331 24689999999987765543 3432 1 122222
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
....|+||+-.+.....+.++.+.+.+++|.+++
T Consensus 65 ---------~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 65 ---------IDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ---------GGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ---------hcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEE
Confidence 2468999998877667788888888888876554
No 448
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=83.17 E-value=7.1 Score=33.24 Aligned_cols=83 Identities=23% Similarity=0.124 Sum_probs=54.3
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC--CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP--ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~--~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+.+++|=.|+ + |..+.++++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..
T Consensus 3 ~~k~vlITGa-s---------------ggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~ 64 (276)
T 1wma_A 3 GIHVALVTGG-N---------------KGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDID 64 (276)
T ss_dssp CCCEEEESSC-S---------------SHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTT
T ss_pred CCCEEEEeCC-C---------------cHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCC
Confidence 3457777775 4 667777777653 36899999999988777766666654 46888888876
Q ss_pred hh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 197 DS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 197 ~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
+. +..+...- ..+.+|.+|..++
T Consensus 65 ~~~~~~~~~~~~~~~~g~id~li~~Ag 91 (276)
T 1wma_A 65 DLQSIRALRDFLRKEYGGLDVLVNNAG 91 (276)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 42 22221100 0247999987654
No 449
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.12 E-value=1.8 Score=41.22 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=61.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH------ 192 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~------ 192 (294)
++.+|+=+|+|.+ |.....++..+ +++|+++|.+++..+.+++ .|. ++..
T Consensus 183 ~~~kV~ViG~G~i--------------G~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----lGa----~~~~l~~~~~ 238 (381)
T 3p2y_A 183 KPASALVLGVGVA--------------GLQALATAKRL--GAKTTGYDVRPEVAEQVRS----VGA----QWLDLGIDAA 238 (381)
T ss_dssp CCCEEEEESCSHH--------------HHHHHHHHHHH--TCEEEEECSSGGGHHHHHH----TTC----EECCCC----
T ss_pred CCCEEEEECchHH--------------HHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----eEEecccccc
Confidence 5679999999864 77777777776 4799999999987776654 232 1111
Q ss_pred ---cch-----------hhhHHHHhhcCCCCceeEEEEcC---CccchHHHHHHHHhcccCCeEEEEecccCCC
Q 022597 193 ---GLA-----------ADSLKALILNGEASSYDFAFVDA---EKRMYQEYFELLLQLIRVGGIIVIDNVLWHG 249 (294)
Q Consensus 193 ---gda-----------~~~l~~l~~~~~~~~fD~vfiD~---~~~~~~~~~~~~~~lLkpgG~ivid~vl~~g 249 (294)
+.+ .+.+.+. -...|+|+.-. ......-+-+...+.++||++|+=-.+-..|
T Consensus 239 ~~~gya~~~~~~~~~~~~~~l~e~-----l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG 307 (381)
T 3p2y_A 239 GEGGYARELSEAERAQQQQALEDA-----ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG 307 (381)
T ss_dssp ---------CHHHHHHHHHHHHHH-----HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred ccccchhhhhHHHHhhhHHHHHHH-----HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC
Confidence 000 1223333 26789998653 1111111235677888998877643333333
No 450
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.09 E-value=2 Score=39.02 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=57.1
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-C-------cEEEEEeCChH-----HHHHHHHHHHHh----C
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-S-------GCLVACERDAR-----SLEVAKKYYERA----G 183 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~-------~~v~~id~~~~-----~~~~A~~~~~~~----g 183 (294)
.+|.=||+| ..+..++..+.. + ..|+.+|.+++ ..+..++.-... |
T Consensus 9 mkI~iIG~G-----------------~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 71 (354)
T 1x0v_A 9 KKVCIVGSG-----------------NWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPG 71 (354)
T ss_dssp EEEEEECCS-----------------HHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTT
T ss_pred CeEEEECCC-----------------HHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCc
Confidence 378889995 444555444422 3 47999999987 655443311000 1
Q ss_pred --CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 184 --VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 184 --l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
+..++++. .+..+. . ...|+||+-.+.....+.++.+.+.++++.+++
T Consensus 72 ~~~~~~~~~~-~~~~~~---~------~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv 121 (354)
T 1x0v_A 72 HKLPPNVVAV-PDVVQA---A------EDADILIFVVPHQFIGKICDQLKGHLKANATGI 121 (354)
T ss_dssp CCCCTTEEEE-SSHHHH---H------TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEE
T ss_pred ccCccCeEEE-cCHHHH---H------cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 12233332 232222 1 468999999877777888888888898887654
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.07 E-value=5.8 Score=35.50 Aligned_cols=89 Identities=12% Similarity=0.095 Sum_probs=54.1
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+++|+=||+|.+ |......+... +.+|+.+|.+++..+.+ +..|. +... . +
T Consensus 153 l~g~~v~IiG~G~i--------------G~~~a~~l~~~--G~~V~~~dr~~~~~~~~----~~~g~----~~~~--~-~ 205 (293)
T 3d4o_A 153 IHGANVAVLGLGRV--------------GMSVARKFAAL--GAKVKVGARESDLLARI----AEMGM----EPFH--I-S 205 (293)
T ss_dssp STTCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTS----EEEE--G-G
T ss_pred CCCCEEEEEeeCHH--------------HHHHHHHHHhC--CCEEEEEECCHHHHHHH----HHCCC----eecC--h-h
Confidence 45789999999653 44444444444 46999999998765433 23343 2221 1 2
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
.+.++ -...|+|+...+.....+ .....++||++++
T Consensus 206 ~l~~~-----l~~aDvVi~~~p~~~i~~---~~l~~mk~~~~li 241 (293)
T 3d4o_A 206 KAAQE-----LRDVDVCINTIPALVVTA---NVLAEMPSHTFVI 241 (293)
T ss_dssp GHHHH-----TTTCSEEEECCSSCCBCH---HHHHHSCTTCEEE
T ss_pred hHHHH-----hcCCCEEEECCChHHhCH---HHHHhcCCCCEEE
Confidence 23333 367899999876433222 2456789988765
No 452
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=83.04 E-value=12 Score=32.27 Aligned_cols=85 Identities=13% Similarity=0.014 Sum_probs=53.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|-.|+. |..+.++++.+. .+.+|+.++.+++..+.+.+.++......++.++.+|..+
T Consensus 6 ~~k~vlVTGas----------------~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 69 (267)
T 2gdz_A 6 NGKVALVTGAA----------------QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69 (267)
T ss_dssp TTCEEEEETTT----------------SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS
T ss_pred CCCEEEEECCC----------------CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC
Confidence 45688888875 566677766653 4689999999988766554444332112468888888764
Q ss_pred h--HHHHhhcC--CCCceeEEEEcCC
Q 022597 198 S--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
. +..+...- ..+.+|.++..++
T Consensus 70 ~~~v~~~~~~~~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 70 QQQLRDTFRKVVDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 2 22221100 0257899998765
No 453
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.82 E-value=8.9 Score=35.60 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=56.8
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCC--CcEEEEEe---CChHHHHHHHHHHHHhCCC------Cc--E
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE--SGCLVACE---RDARSLEVAKKYYERAGVS------HK--V 188 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~--~~~v~~id---~~~~~~~~A~~~~~~~gl~------~~--v 188 (294)
+|.=||+ |..+..++..+.. +..|+.++ .+++.++.+ +++.|+. .. +
T Consensus 4 kI~ViGa-----------------G~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~---~~~~g~~~~~~~~~~~~~ 63 (404)
T 3c7a_A 4 KVCVCGG-----------------GNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKA---LGADELTVIVNEKDGTQT 63 (404)
T ss_dssp EEEEECC-----------------SHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHH---HTTSCEEEEEECSSSCEE
T ss_pred eEEEECC-----------------CHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHH---HhhccceeeeecCCCccc
Confidence 6778888 6666666666632 56899999 666655432 2332210 01 1
Q ss_pred EEEEc-c-hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 189 KIKHG-L-AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 189 ~~~~g-d-a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..... . ....+.+. ....|+||+-.+.....+.++.+.+.++++.+|+.
T Consensus 64 ~~~~~~~~~~~~~~~a-----~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 64 EVKSRPKVITKDPEIA-----ISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp EEEECCSEEESCHHHH-----HTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred eeeccceEEeCCHHHH-----hCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEE
Confidence 11000 0 11112221 14689999998877788899999999998875543
No 454
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=82.71 E-value=15 Score=33.42 Aligned_cols=74 Identities=18% Similarity=0.116 Sum_probs=43.3
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH-HHHHHHHhCCCCcEEEEEcchhhhHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV-AKKYYERAGVSHKVKIKHGLAADSLK 200 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~-A~~~~~~~gl~~~v~~~~gda~~~l~ 200 (294)
+|.=||+|.+ |+.........+...+++.+|++++.++. +........+...+++..++..+.
T Consensus 2 KI~IiGaG~v--------------G~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~-- 65 (310)
T 2xxj_A 2 KVGIVGSGMV--------------GSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDL-- 65 (310)
T ss_dssp EEEEECCSHH--------------HHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG--
T ss_pred EEEEECCCHH--------------HHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHh--
Confidence 5677888764 55444333333334689999999887663 333333221223566665554322
Q ss_pred HHhhcCCCCceeEEEEcCC
Q 022597 201 ALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 201 ~l~~~~~~~~fD~vfiD~~ 219 (294)
...|+|++-++
T Consensus 66 --------~~aD~Vii~ag 76 (310)
T 2xxj_A 66 --------EGARAVVLAAG 76 (310)
T ss_dssp --------TTEEEEEECCC
T ss_pred --------CCCCEEEECCC
Confidence 56899998654
No 455
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=82.69 E-value=2.5 Score=46.40 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=58.6
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCc--EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~--~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
+++|+-||. |..++.+..+ +. .+.++|+++.+++.-+.|+. ...++.+|..+.+
T Consensus 853 ~viDLFsG~---------------GGlslGfe~A---G~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~ 908 (1330)
T 3av4_A 853 RTLDVFSGC---------------GGLSEGFHQA---GISETLWAIEMWDPAAQAFRLNNP------GTTVFTEDCNVLL 908 (1330)
T ss_dssp EEEEETCTT---------------SHHHHHHHHT---TSEEEEEEECCSHHHHHHHHHHCT------TSEEECSCHHHHH
T ss_pred eEEecccCc---------------cHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhCC------CCcEeeccHHHHh
Confidence 566666666 6566655553 32 57899999998877666542 2457778887665
Q ss_pred HHHhh---------cC-CCCceeEEEEcCC--------cc---c--------hHHHHHHHHhcccCCeEEEEecc
Q 022597 200 KALIL---------NG-EASSYDFAFVDAE--------KR---M--------YQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 200 ~~l~~---------~~-~~~~fD~vfiD~~--------~~---~--------~~~~~~~~~~lLkpgG~ivid~v 245 (294)
..... .. ..+.+|+++..++ +. . +..+++ +...++|. ++++.||
T Consensus 909 ~~~~~gdi~~~~~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lr-iv~~~rPk-~fv~ENV 981 (1330)
T 3av4_A 909 KLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPR-FFLLENV 981 (1330)
T ss_dssp HHHTTTCSBCSSCCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHH-HHHHHCCS-EEEEEEE
T ss_pred HhhhccchhhhhhhhccccCccceEEecCCCcccccccccccccccchhhHHHHHHHH-HHHHhcCc-EEEEecc
Confidence 43320 00 1246899986644 11 0 222333 33556786 7888998
No 456
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.61 E-value=2.8 Score=38.01 Aligned_cols=91 Identities=7% Similarity=0.050 Sum_probs=57.2
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCC---CcEEE----E
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS---HKVKI----K 191 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~---~~v~~----~ 191 (294)
..+|.=||+|. .+..++..+. .+..|+.+ .+++.++..++ .|+. ...++ .
T Consensus 19 ~~kI~IiGaGa-----------------~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~----~g~~~~~~~~~~~~~~~ 76 (318)
T 3hwr_A 19 GMKVAIMGAGA-----------------VGCYYGGMLARAGHEVILI-ARPQHVQAIEA----TGLRLETQSFDEQVKVS 76 (318)
T ss_dssp -CEEEEESCSH-----------------HHHHHHHHHHHTTCEEEEE-CCHHHHHHHHH----HCEEEECSSCEEEECCE
T ss_pred CCcEEEECcCH-----------------HHHHHHHHHHHCCCeEEEE-EcHhHHHHHHh----CCeEEEcCCCcEEEeee
Confidence 34899999954 4444444442 24589999 88887765543 2321 00111 1
Q ss_pred -EcchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 192 -HGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 192 -~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+.. . ...+|+||+-.......+.++.+.+.++++.+++.
T Consensus 77 ~~~~~~----~------~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 77 ASSDPS----A------VQGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp EESCGG----G------GTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred eeCCHH----H------cCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 11211 1 25799999988877788899999999999987664
No 457
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=82.26 E-value=6.4 Score=34.23 Aligned_cols=83 Identities=12% Similarity=0.026 Sum_probs=57.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|-.|++ |..+.++++.+ ..+.+|+.++.+++..+...+.++..+...++.++..|..+
T Consensus 9 ~~k~~lVTGas----------------~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 9 KGKTALVTGST----------------AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72 (267)
T ss_dssp TTCEEEETTCS----------------SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS
T ss_pred CCCEEEEeCCC----------------cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC
Confidence 45688888875 45666666665 34689999999999888777777766555578888888754
Q ss_pred h--HHHHhhcCCCCceeEEEEcCC
Q 022597 198 S--LKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~~~~~~fD~vfiD~~ 219 (294)
. +..+.+. .+..|.++..++
T Consensus 73 ~~~~~~~~~~--~g~id~lv~nAg 94 (267)
T 3t4x_A 73 EQGCQDVIEK--YPKVDILINNLG 94 (267)
T ss_dssp HHHHHHHHHH--CCCCSEEEECCC
T ss_pred HHHHHHHHHh--cCCCCEEEECCC
Confidence 2 3333322 367999987764
No 458
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.09 E-value=11 Score=36.20 Aligned_cols=96 Identities=22% Similarity=0.269 Sum_probs=60.2
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHH-------hC-C------C
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYER-------AG-V------S 185 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~-------~g-l------~ 185 (294)
++|.-||+ |..+..++..+. .+..|+.+|.+++.++.+++.++. .| + .
T Consensus 38 ~kV~VIGa-----------------G~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~ 100 (463)
T 1zcj_A 38 SSVGVLGL-----------------GTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAK 100 (463)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CEEEEECc-----------------CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 47888999 445555555442 256899999999998887764431 11 0 1
Q ss_pred CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc--hHHHHHHHHhcccCCeEEEEecc
Q 022597 186 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--YQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 186 ~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~--~~~~~~~~~~lLkpgG~ivid~v 245 (294)
...++ ..+. +. -...|+||+-.+... ...+++.+.+.++||.+++ +|.
T Consensus 101 ~~~~i-~~~~-~~---------~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~-snT 150 (463)
T 1zcj_A 101 PKLRF-SSST-KE---------LSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLC-TNT 150 (463)
T ss_dssp CCEEE-ESCG-GG---------GTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEE-ECC
T ss_pred HHhhh-cCCH-HH---------HCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEE-eCC
Confidence 11233 3343 21 256899998875322 3677888888888887665 454
No 459
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.87 E-value=2.6 Score=36.94 Aligned_cols=85 Identities=14% Similarity=-0.010 Sum_probs=52.7
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHH
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 201 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~ 201 (294)
+|.=||+|. .+..++..+..+.+|+.+|.+++..+.+.+. |.. ... ..+.
T Consensus 3 ~i~iiG~G~-----------------~G~~~a~~l~~g~~V~~~~~~~~~~~~~~~~----g~~----~~~--~~~~--- 52 (289)
T 2cvz_A 3 KVAFIGLGA-----------------MGYPMAGHLARRFPTLVWNRTFEKALRHQEE----FGS----EAV--PLER--- 52 (289)
T ss_dssp CEEEECCST-----------------THHHHHHHHHTTSCEEEECSSTHHHHHHHHH----HCC----EEC--CGGG---
T ss_pred eEEEEcccH-----------------HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHC----CCc----ccC--HHHH---
Confidence 577788854 4444444332256799999999877655432 332 111 2121
Q ss_pred HhhcCCCCceeEEEEcCCcc-chHHHHHHHHhcccCCeEEEE
Q 022597 202 LILNGEASSYDFAFVDAEKR-MYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 202 l~~~~~~~~fD~vfiD~~~~-~~~~~~~~~~~lLkpgG~ivi 242 (294)
....|+||+-.+.. .....++.+.+.+++|.+++.
T Consensus 53 ------~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 53 ------VAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp ------GGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEE
T ss_pred ------HhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEE
Confidence 14689999987644 366677777788888876653
No 460
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.74 E-value=11 Score=33.80 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=54.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
..+++|+=||+|.+ |......+... +.+|+.+|.+++..+.+. ..|. +... . +
T Consensus 155 l~g~~v~IiG~G~i--------------G~~~a~~l~~~--G~~V~~~d~~~~~~~~~~----~~g~----~~~~--~-~ 207 (300)
T 2rir_A 155 IHGSQVAVLGLGRT--------------GMTIARTFAAL--GANVKVGARSSAHLARIT----EMGL----VPFH--T-D 207 (300)
T ss_dssp STTSEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTC----EEEE--G-G
T ss_pred CCCCEEEEEcccHH--------------HHHHHHHHHHC--CCEEEEEECCHHHHHHHH----HCCC----eEEc--h-h
Confidence 45689999999653 44444444444 579999999987554332 2342 2222 1 2
Q ss_pred hHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 198 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
.+.++ -...|+|+...+..... +.....++||++++
T Consensus 208 ~l~~~-----l~~aDvVi~~~p~~~i~---~~~~~~mk~g~~li 243 (300)
T 2rir_A 208 ELKEH-----VKDIDICINTIPSMILN---QTVLSSMTPKTLIL 243 (300)
T ss_dssp GHHHH-----STTCSEEEECCSSCCBC---HHHHTTSCTTCEEE
T ss_pred hHHHH-----hhCCCEEEECCChhhhC---HHHHHhCCCCCEEE
Confidence 24443 36789999987753322 23457889988665
No 461
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=81.67 E-value=13 Score=27.32 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=52.2
Q ss_pred cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhc--cc
Q 022597 160 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQL--IR 235 (294)
Q Consensus 160 ~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~l--Lk 235 (294)
.+|..+|-++...+..++.++..|+ .+. ...+..+.+..+. ...+|+|++|.. ..+-.++++.+.+. ..
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~ 76 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS----TRGYDAVFIDLNLPDTSGLALVKQLRALPMEK 76 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH----HSCCSEEEEESBCSSSBHHHHHHHHHHSCCSS
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH----hcCCCEEEEeCCCCCCCHHHHHHHHHhhhccC
Confidence 5788999999999999999998875 233 3455555555553 357999999965 33445677777665 33
Q ss_pred CCeEEEEe
Q 022597 236 VGGIIVID 243 (294)
Q Consensus 236 pgG~ivid 243 (294)
.--++++.
T Consensus 77 ~~~ii~~s 84 (127)
T 3i42_A 77 TSKFVAVS 84 (127)
T ss_dssp CCEEEEEE
T ss_pred CCCEEEEE
Confidence 33455544
No 462
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.31 E-value=3.7 Score=38.17 Aligned_cols=90 Identities=10% Similarity=0.098 Sum_probs=56.9
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
++|.=||+ |..+-.++..+. .+.+|++.|.+++..+.++ +.|.. . ..+..+.+
T Consensus 9 ~kIgIIG~-----------------G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~----~~G~~----~-~~~~~e~~ 62 (341)
T 3ktd_A 9 RPVCILGL-----------------GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAV----DEGFD----V-SADLEATL 62 (341)
T ss_dssp SCEEEECC-----------------SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH----HTTCC----E-ESCHHHHH
T ss_pred CEEEEEee-----------------cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCe----e-eCCHHHHH
Confidence 36888898 445555555542 2468999999998776654 34541 1 23444443
Q ss_pred HHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEEe
Q 022597 200 KALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 243 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivid 243 (294)
+.. ....|+||+-.+.....+.++.+.++ +||. +++|
T Consensus 63 ~~a-----~~~aDlVilavP~~~~~~vl~~l~~~-~~~~-iv~D 99 (341)
T 3ktd_A 63 QRA-----AAEDALIVLAVPMTAIDSLLDAVHTH-APNN-GFTD 99 (341)
T ss_dssp HHH-----HHTTCEEEECSCHHHHHHHHHHHHHH-CTTC-CEEE
T ss_pred Hhc-----ccCCCEEEEeCCHHHHHHHHHHHHcc-CCCC-EEEE
Confidence 321 12469999998876677778777775 6664 4554
No 463
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=81.23 E-value=4.5 Score=38.45 Aligned_cols=87 Identities=10% Similarity=0.119 Sum_probs=49.6
Q ss_pred cHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHH------------HHHhCCCCcEEEEEcchhhhHHHHhhcCCCCcee
Q 022597 146 GYSSLAIALVLP-ESGCLVACERDARSLEVAKKY------------YERAGVSHKVKIKHGLAADSLKALILNGEASSYD 212 (294)
Q Consensus 146 G~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~------------~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD 212 (294)
|+.+..++..+. .+.+|+++|++++.++..++. +.+.--..++++ ..+..+.+ ...|
T Consensus 9 G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~---------~~aD 78 (436)
T 1mv8_A 9 GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAV---------LDSD 78 (436)
T ss_dssp STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH---------HTCS
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHh---------ccCC
Confidence 555555554442 246899999999987655431 110000112433 22332222 3579
Q ss_pred EEEEcCCccc----------hHHHHHHHHhcccC---CeEEEE
Q 022597 213 FAFVDAEKRM----------YQEYFELLLQLIRV---GGIIVI 242 (294)
Q Consensus 213 ~vfiD~~~~~----------~~~~~~~~~~lLkp---gG~ivi 242 (294)
+||+-.+.+. ..+.++.+.+.|++ |.+++.
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV 121 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE
Confidence 9998775332 67777888888998 666654
No 464
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=81.20 E-value=1.7 Score=41.34 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=33.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHH
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVA 175 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A 175 (294)
.+.+|+=+|+|.+ |.....++..++ .+|+++|.+++..+.+
T Consensus 171 ~g~~V~ViGaG~i--------------G~~aa~~a~~~G--a~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVA--------------GLAAIGAANSLG--AIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHH--------------HHHHHHHHHHTT--CEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHCC--CEEEEEcCCHHHHHHH
Confidence 5789999999874 777777777774 6899999999877665
No 465
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.16 E-value=7.1 Score=35.21 Aligned_cols=94 Identities=13% Similarity=0.123 Sum_probs=54.9
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCC------CCcEEEEEc
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGV------SHKVKIKHG 193 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl------~~~v~~~~g 193 (294)
.+|.=||+|. .+..++..+. .+..|+.++.++. +.+++.|+ ...+++..-
T Consensus 3 mkI~IiGaGa-----------------iG~~~a~~L~~~g~~V~~~~r~~~------~~i~~~Gl~~~~~~~g~~~~~~~ 59 (320)
T 3i83_A 3 LNILVIGTGA-----------------IGSFYGALLAKTGHCVSVVSRSDY------ETVKAKGIRIRSATLGDYTFRPA 59 (320)
T ss_dssp CEEEEESCCH-----------------HHHHHHHHHHHTTCEEEEECSTTH------HHHHHHCEEEEETTTCCEEECCS
T ss_pred CEEEEECcCH-----------------HHHHHHHHHHhCCCeEEEEeCChH------HHHHhCCcEEeecCCCcEEEeee
Confidence 3788889954 4444444332 2468999999872 33444443 112222100
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.+....... ...+|+||+-.......+.++.+.+.++++..++.
T Consensus 60 ~~~~~~~~~-----~~~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 60 AVVRSAAEL-----ETKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp CEESCGGGC-----SSCCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEE
T ss_pred eeECCHHHc-----CCCCCEEEEecCCCChHHHHHHHHhhcCCCCEEEE
Confidence 010111111 24799999988766667788889999999887664
No 466
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=81.10 E-value=6.4 Score=34.78 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=27.8
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 209 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 209 ~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+|+||+-.......+.++.+.+.++++.+++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 5799999988777778888888888888876654
No 467
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=81.09 E-value=10 Score=34.57 Aligned_cols=75 Identities=19% Similarity=0.096 Sum_probs=44.6
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH-HHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV-AKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~-A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
.+|.=||+|.+ |+.........+-..+++.+|++++.++. +........+...+++..++..+.
T Consensus 6 ~KI~IiGaG~v--------------G~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~- 70 (318)
T 1ez4_A 6 QKVVLVGDGAV--------------GSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC- 70 (318)
T ss_dssp CEEEEECCSHH--------------HHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGG-
T ss_pred CEEEEECCCHH--------------HHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHh-
Confidence 47889999774 55433333322324589999999987764 333333222224566665554332
Q ss_pred HHHhhcCCCCceeEEEEcCC
Q 022597 200 KALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~ 219 (294)
..-|+|++-++
T Consensus 71 ---------~~aDvVii~ag 81 (318)
T 1ez4_A 71 ---------KDADLVVITAG 81 (318)
T ss_dssp ---------TTCSEEEECCC
T ss_pred ---------CCCCEEEECCC
Confidence 46799998765
No 468
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=80.98 E-value=10 Score=34.01 Aligned_cols=72 Identities=11% Similarity=0.054 Sum_probs=41.9
Q ss_pred cEEEEEeCChHHHHHHHHHHHHh-C-CCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccc---------------
Q 022597 160 GCLVACERDARSLEVAKKYYERA-G-VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------- 222 (294)
Q Consensus 160 ~~v~~id~~~~~~~~A~~~~~~~-g-l~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~--------------- 222 (294)
.+|+.+|++++.++.....+... . ....+++...|. +. -...|+||+-.+...
T Consensus 27 ~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~---------~~~aDvViiav~~~~~~~~~~g~~r~~l~~ 96 (309)
T 1hyh_A 27 DDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AA---------LADADVVISTLGNIKLQQDNPTGDRFAELK 96 (309)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG---------GTTCSEEEECCSCGGGTC-------CTTHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH---------hCCCCEEEEecCCcccCCCCCCCCHHHHHH
Confidence 58999999998776554433321 1 112355544554 22 246899998775332
Q ss_pred -----hHHHHHHHHhcccCCeEEEE
Q 022597 223 -----YQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 223 -----~~~~~~~~~~lLkpgG~ivi 242 (294)
..+.++.+.+. .|++++++
T Consensus 97 ~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 97 FTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp HHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred HHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 24555555554 47777664
No 469
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=80.95 E-value=12 Score=33.10 Aligned_cols=84 Identities=19% Similarity=0.114 Sum_probs=58.8
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
+++|.+|-.|.+. | .+.++++.+ ..+++|+.+|++++.++.+.+.++..|. ++.++..|..
T Consensus 5 L~gKvalVTGas~---------------G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt 66 (254)
T 4fn4_A 5 LKNKVVIVTGAGS---------------G-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVS 66 (254)
T ss_dssp GTTCEEEEETTTS---------------H-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTT
T ss_pred CCCCEEEEeCCCC---------------H-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCC
Confidence 4678899999876 5 456666655 3578999999999999888888887663 5888888875
Q ss_pred hh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 197 DS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 197 ~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
+. ++.+.+.- ..++.|.++.+++
T Consensus 67 ~~~~v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 67 KKKDVEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 42 22221110 1368999987654
No 470
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=80.77 E-value=6.2 Score=35.72 Aligned_cols=86 Identities=16% Similarity=0.216 Sum_probs=56.1
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-C----cEEEEEeCChH--HHHHHHHHHHHhCCCCcEEEEEc
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-S----GCLVACERDAR--SLEVAKKYYERAGVSHKVKIKHG 193 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~----~~v~~id~~~~--~~~~A~~~~~~~gl~~~v~~~~g 193 (294)
.+|.=||+ |..+..++..+.. + ..|+.++.+++ ..+.++ +.|+ ++ ..
T Consensus 23 mkI~iIG~-----------------G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~----~~G~----~~-~~ 76 (322)
T 2izz_A 23 MSVGFIGA-----------------GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR----KMGV----KL-TP 76 (322)
T ss_dssp CCEEEESC-----------------SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH----HHTC----EE-ES
T ss_pred CEEEEECC-----------------CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH----HcCC----EE-eC
Confidence 46888999 5555565555422 3 47999999985 554433 3353 32 23
Q ss_pred chhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 194 LAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 194 da~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
+..+.+ ...|+||+-.......+.++.+.+.+++|.+++
T Consensus 77 ~~~e~~---------~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivv 115 (322)
T 2izz_A 77 HNKETV---------QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVV 115 (322)
T ss_dssp CHHHHH---------HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred ChHHHh---------ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 333322 357999999887778888888888888877544
No 471
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=80.71 E-value=16 Score=27.41 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=52.9
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHh--cc
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQ--LI 234 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~--lL 234 (294)
..+|..+|-++...+..++.++..|+. +. ...+..+.+..+. ..++|+|++|.. ..+-.++++.+.+ ..
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~--v~-~~~~~~~a~~~l~----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 78 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFD--SD-MVHSAAQALEQVA----RRPYAAMTVDLNLPDQDGVSLIRALRRDSRT 78 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCE--EE-EECSHHHHHHHHH----HSCCSEEEECSCCSSSCHHHHHHHHHTSGGG
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCe--EE-EECCHHHHHHHHH----hCCCCEEEEeCCCCCCCHHHHHHHHHhCccc
Confidence 468999999999999999999987763 43 3456666665553 367999999975 2334566777665 22
Q ss_pred cCCeEEEEe
Q 022597 235 RVGGIIVID 243 (294)
Q Consensus 235 kpgG~ivid 243 (294)
..--++++.
T Consensus 79 ~~~~ii~~s 87 (140)
T 3grc_A 79 RDLAIVVVS 87 (140)
T ss_dssp TTCEEEEEC
T ss_pred CCCCEEEEe
Confidence 333445543
No 472
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.70 E-value=11 Score=31.18 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=50.1
Q ss_pred cHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCC-CcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCccch
Q 022597 146 GYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMY 223 (294)
Q Consensus 146 G~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~-~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~ 223 (294)
|..+..++..+. .+.+|+.++.+++..+...+.+... +. ..++ ..+..+.+ ...|+||+-.+....
T Consensus 10 G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~---------~~~D~Vi~~~~~~~~ 77 (212)
T 1jay_A 10 GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI-AGDASIT--GMKNEDAA---------EACDIAVLTIPWEHA 77 (212)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH-HSSCCEE--EEEHHHHH---------HHCSEEEECSCHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-cccCCCC--hhhHHHHH---------hcCCEEEEeCChhhH
Confidence 666666666553 3568999999988766554432210 10 1233 22332322 347999988876666
Q ss_pred HHHHHHHHhcccCCeEEEEecc
Q 022597 224 QEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 224 ~~~~~~~~~lLkpgG~ivid~v 245 (294)
.+.++.+.+.+ + |.++++..
T Consensus 78 ~~~~~~l~~~~-~-~~~vi~~~ 97 (212)
T 1jay_A 78 IDTARDLKNIL-R-EKIVVSPL 97 (212)
T ss_dssp HHHHHHTHHHH-T-TSEEEECC
T ss_pred HHHHHHHHHHc-C-CCEEEEcC
Confidence 67776666666 4 44556544
No 473
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=80.60 E-value=1.8 Score=39.12 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=28.7
Q ss_pred CceeEEEEcCCccchHHHHHHHHhcccCCeEEEE
Q 022597 209 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 209 ~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~ivi 242 (294)
..+|+||+-.......+.++.+.+.++++..++.
T Consensus 68 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 68 GPMDLVLVGLKTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred CCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEE
Confidence 5799999988777777889999999999987664
No 474
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.22 E-value=21 Score=32.29 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=43.5
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH-HHHHHHHhCC-CCcEEEEEcchhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV-AKKYYERAGV-SHKVKIKHGLAAD 197 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~-A~~~~~~~gl-~~~v~~~~gda~~ 197 (294)
..+|.=||+|.+ |++....+...+...+|+.+|++++..+. +......... ...+++..++..+
T Consensus 6 ~~kI~IIGaG~v--------------G~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~a 71 (316)
T 1ldn_A 6 GARVVVIGAGFV--------------GASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD 71 (316)
T ss_dssp SCEEEEECCSHH--------------HHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG
T ss_pred CCEEEEECcCHH--------------HHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHH
Confidence 458999999875 44333222222224589999999985553 3333333221 1246666544322
Q ss_pred hHHHHhhcCCCCceeEEEEcCC
Q 022597 198 SLKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 198 ~l~~l~~~~~~~~fD~vfiD~~ 219 (294)
-...|+|++-.+
T Consensus 72 ----------l~~aDvViia~~ 83 (316)
T 1ldn_A 72 ----------CRDADLVVICAG 83 (316)
T ss_dssp ----------TTTCSEEEECCS
T ss_pred ----------hCCCCEEEEcCC
Confidence 256899998754
No 475
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=79.81 E-value=12 Score=29.15 Aligned_cols=81 Identities=5% Similarity=0.051 Sum_probs=53.2
Q ss_pred cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccCC
Q 022597 160 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVG 237 (294)
Q Consensus 160 ~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkpg 237 (294)
.+|..+|-++...+..++.++..|+. +.....+..+.+..+... ...+|+|++|... .+-.++++.+.+.-..-
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~~al~~l~~~--~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~ 112 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFN--IIDTAADGEEAVIKYKNH--YPNIDIVTLXITMPKMDGITCLSNIMEFDKNA 112 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH--GGGCCEEEECSSCSSSCHHHHHHHHHHHCTTC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCe--EEEEECCHHHHHHHHHhc--CCCCCEEEEeccCCCccHHHHHHHHHhhCCCC
Confidence 37999999999999999999987752 432556666666655321 1279999999752 33456666665543333
Q ss_pred eEEEEec
Q 022597 238 GIIVIDN 244 (294)
Q Consensus 238 G~ivid~ 244 (294)
-+|++.+
T Consensus 113 ~ii~ls~ 119 (157)
T 3hzh_A 113 RVIMISA 119 (157)
T ss_dssp CEEEEES
T ss_pred cEEEEec
Confidence 4555543
No 476
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=79.79 E-value=17 Score=27.37 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=54.2
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhc-cc
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQL-IR 235 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~l-Lk 235 (294)
..+|..+|-++...+..++.++..|....+ ....+..+.+..+. ...+|+|++|... .+-.++++.+.+. ..
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~a~~~l~----~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~ 79 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQL-EFVDNGAKALYQVQ----QAKYDLIILDIGLPIANGFEVMSAVRKPGAN 79 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEE-EEESSHHHHHHHHT----TCCCSEEEECTTCGGGCHHHHHHHHHSSSTT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeE-EEECCHHHHHHHhh----cCCCCEEEEeCCCCCCCHHHHHHHHHhcccc
Confidence 458999999999999999999998875322 33456666666553 4679999999763 2345666666652 22
Q ss_pred CC-eEEEEec
Q 022597 236 VG-GIIVIDN 244 (294)
Q Consensus 236 pg-G~ivid~ 244 (294)
++ -+|++..
T Consensus 80 ~~~pii~~s~ 89 (144)
T 3kht_A 80 QHTPIVILTD 89 (144)
T ss_dssp TTCCEEEEET
T ss_pred cCCCEEEEeC
Confidence 33 4555543
No 477
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=79.75 E-value=5.6 Score=38.80 Aligned_cols=103 Identities=11% Similarity=0.160 Sum_probs=59.0
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC--Cc-EEEEEeCChH----HHHHHHHH-------------
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE--SG-CLVACERDAR----SLEVAKKY------------- 178 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~--~~-~v~~id~~~~----~~~~A~~~------------- 178 (294)
+-++|-=||+| +.+..+|..+.. +- .|+++|++++ .++..++.
T Consensus 17 ~~mkIaVIGlG-----------------~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~ 79 (478)
T 3g79_A 17 PIKKIGVLGMG-----------------YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEE 79 (478)
T ss_dssp SCCEEEEECCS-----------------TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHH
T ss_pred CCCEEEEECcC-----------------HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHH
Confidence 34588889994 455555544422 45 7999999998 66554331
Q ss_pred -HHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc---------c---hHHHHHHHHhcccCCeEEEEecc
Q 022597 179 -YERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---------M---YQEYFELLLQLIRVGGIIVIDNV 245 (294)
Q Consensus 179 -~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~---------~---~~~~~~~~~~lLkpgG~ivid~v 245 (294)
+++.-...++++- .| .+. -...|+||+-.+.+ + .....+.+.+.|++|.++|....
T Consensus 80 l~~~~~~~g~l~~t-td-~ea---------~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST 148 (478)
T 3g79_A 80 LIGKVVKAGKFECT-PD-FSR---------ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLEST 148 (478)
T ss_dssp HHHHHHHTTCEEEE-SC-GGG---------GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred HHHhhcccCCeEEe-Cc-HHH---------HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCC
Confidence 1000001234442 33 222 24579998865421 2 34455677788999988876655
Q ss_pred cCCC
Q 022597 246 LWHG 249 (294)
Q Consensus 246 l~~g 249 (294)
...|
T Consensus 149 v~pg 152 (478)
T 3g79_A 149 ITPG 152 (478)
T ss_dssp CCTT
T ss_pred CChH
Confidence 5444
No 478
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=79.74 E-value=13 Score=32.89 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCC--hHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERD--ARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~--~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
.++++|-.|.+ |..+.++++.+. .+.+|+.++.+ ++..+...+.++..| .++.++.+|.
T Consensus 48 ~~k~vlVTGas----------------~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 109 (294)
T 3r3s_A 48 KDRKALVTGGD----------------SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDL 109 (294)
T ss_dssp TTCEEEEETTT----------------SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCT
T ss_pred CCCEEEEeCCC----------------cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecC
Confidence 45689988875 456666666653 46789998887 344555556666654 4688888887
Q ss_pred hhh--HHHHhhcC--CCCceeEEEEcCCc------------cch-----------HHHHHHHHhcccCCeEEEE
Q 022597 196 ADS--LKALILNG--EASSYDFAFVDAEK------------RMY-----------QEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 196 ~~~--l~~l~~~~--~~~~fD~vfiD~~~------------~~~-----------~~~~~~~~~lLkpgG~ivi 242 (294)
.+. ++.+.+.- ..+..|.++..++. +.+ ....+.+.+.++++|.||.
T Consensus 110 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 110 SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp TSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 542 22221100 02578999876541 111 1334455677888887665
No 479
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=79.59 E-value=13 Score=32.03 Aligned_cols=84 Identities=14% Similarity=0.054 Sum_probs=53.5
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEE-eCChHHHHHHHHHHHHhCCCCcEEEEEcch
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVAC-ERDARSLEVAKKYYERAGVSHKVKIKHGLA 195 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~i-d~~~~~~~~A~~~~~~~gl~~~v~~~~gda 195 (294)
..++++|=.|++. ..+.++++.+. .+.+|+.+ +.+++..+.+.+.++..| .++.++.+|.
T Consensus 6 l~~k~vlVTGas~----------------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 67 (259)
T 3edm_A 6 FTNRTIVVAGAGR----------------DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADL 67 (259)
T ss_dssp TTTCEEEEETTTS----------------HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCT
T ss_pred CCCCEEEEECCCc----------------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCC
Confidence 3567889888864 45566666552 46788887 777777777666666544 4688888887
Q ss_pred hhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 196 ADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 196 ~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
.+. ++.+...- ..+..|.++..++
T Consensus 68 ~~~~~v~~~~~~~~~~~g~id~lv~nAg 95 (259)
T 3edm_A 68 TNAAEVEAAISAAADKFGEIHGLVHVAG 95 (259)
T ss_dssp TCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 542 22221100 0257999987653
No 480
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=79.47 E-value=7.6 Score=34.71 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=49.7
Q ss_pred CeEEEEc-cccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 121 QRCIEVG-VYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 121 ~~vLEiG-~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
++|.=|| + |..+..++..+.. +..|+.+|.+++. +..+
T Consensus 22 ~~I~iIGg~-----------------G~mG~~la~~l~~~G~~V~~~~~~~~~----------------------~~~~- 61 (298)
T 2pv7_A 22 HKIVIVGGY-----------------GKLGGLFARYLRASGYPISILDREDWA----------------------VAES- 61 (298)
T ss_dssp CCEEEETTT-----------------SHHHHHHHHHHHTTTCCEEEECTTCGG----------------------GHHH-
T ss_pred CEEEEEcCC-----------------CHHHHHHHHHHHhCCCeEEEEECCccc----------------------CHHH-
Confidence 3688898 8 5666666666532 4579999988751 1111
Q ss_pred HHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
. ....|+||+-.+.....+.++.+.+.+++|.+++
T Consensus 62 ---~-----~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~ 96 (298)
T 2pv7_A 62 ---I-----LANADVVIVSVPINLTLETIERLKPYLTENMLLA 96 (298)
T ss_dssp ---H-----HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred ---H-----hcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEE
Confidence 1 1467889888877777888888888888876443
No 481
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.41 E-value=8.4 Score=33.20 Aligned_cols=84 Identities=18% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCCeEEEEcc-ccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 119 GAQRCIEVGV-YTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 119 ~~~~vLEiG~-g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
.++++|=.|. |. | .+..+++.+ ..+.+|+.++.+++..+.+.+.++..+ ..++.++..|..
T Consensus 21 ~~k~vlITGasg~---------------G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~ 83 (266)
T 3o38_A 21 KGKVVLVTAAAGT---------------G-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVT 83 (266)
T ss_dssp TTCEEEESSCSSS---------------S-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTT
T ss_pred CCCEEEEECCCCC---------------c-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCC
Confidence 5668898887 55 4 334444443 246899999999998887777776544 347999999876
Q ss_pred hh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 197 DS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 197 ~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
+. +..+...- ..+++|.++..++
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 84 STEAVDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 42 22221100 0257899987765
No 482
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=79.35 E-value=11 Score=34.50 Aligned_cols=76 Identities=17% Similarity=0.051 Sum_probs=44.5
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHH-HHHHHHHhCCCCcEEEEEcchhhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEV-AKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~-A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
..+|.=||+|.+ |+.........+-..+++.+|++++.++- +........+...+++..++..+.
T Consensus 9 ~~KI~IiGaG~v--------------G~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 9 HQKVILVGDGAV--------------GSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDA 74 (326)
T ss_dssp CCEEEEECCSHH--------------HHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHh
Confidence 358999999774 55444333322323589999999887654 332222221224566665554332
Q ss_pred HHHHhhcCCCCceeEEEEcCC
Q 022597 199 LKALILNGEASSYDFAFVDAE 219 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~ 219 (294)
..-|+|++-++
T Consensus 75 ----------~~aDvVii~ag 85 (326)
T 2zqz_A 75 ----------KDADLVVITAG 85 (326)
T ss_dssp ----------GGCSEEEECCC
T ss_pred ----------CCCCEEEEcCC
Confidence 45799998765
No 483
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=79.35 E-value=3.4 Score=37.90 Aligned_cols=93 Identities=12% Similarity=0.243 Sum_probs=58.2
Q ss_pred eEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHHHh----C--CCCcEEEEEcc
Q 022597 122 RCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERA----G--VSHKVKIKHGL 194 (294)
Q Consensus 122 ~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~~~----g--l~~~v~~~~gd 194 (294)
+|.=||+ |..+..++..+.. +..|+.+|.+++.++..++.-... | +..++++. .+
T Consensus 17 kI~iIG~-----------------G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 78 (366)
T 1evy_A 17 KAVVFGS-----------------GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT-SD 78 (366)
T ss_dssp EEEEECC-----------------SHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE-SC
T ss_pred eEEEECC-----------------CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeee-CC
Confidence 6888898 6667777776643 357999999998776554431000 1 11123332 22
Q ss_pred hhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHH----HHhcccC-CeEEE
Q 022597 195 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFEL----LLQLIRV-GGIIV 241 (294)
Q Consensus 195 a~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~----~~~lLkp-gG~iv 241 (294)
..+. ....|+||+-.+.....+.++. +.+.+++ |.+++
T Consensus 79 ~~~~---------~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv 121 (366)
T 1evy_A 79 VEKA---------YNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVL 121 (366)
T ss_dssp HHHH---------HTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEE
T ss_pred HHHH---------HcCCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEE
Confidence 2222 1468999998876666777777 7778888 76554
No 484
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.32 E-value=3.5 Score=36.94 Aligned_cols=87 Identities=11% Similarity=0.066 Sum_probs=52.9
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
++|-=||+ |..+..++..+. .+.+|+.+|++++..+.+.+ .|.. ....+..+.
T Consensus 8 ~~I~iIG~-----------------G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~----~~~~~~~e~- 61 (303)
T 3g0o_A 8 FHVGIVGL-----------------GSMGMGAARSCLRAGLSTWGADLNPQACANLLA----EGAC----GAAASAREF- 61 (303)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS----EEESSSTTT-
T ss_pred CeEEEECC-----------------CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----cCCc----cccCCHHHH-
Confidence 47888898 666666666553 25689999999987765443 3431 112333332
Q ss_pred HHHhhcCCCCceeEEEEcCCcc-chHHHH---HHHHhcccCCeEEE
Q 022597 200 KALILNGEASSYDFAFVDAEKR-MYQEYF---ELLLQLIRVGGIIV 241 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~~-~~~~~~---~~~~~lLkpgG~iv 241 (294)
....|+||+-.+.. .....+ +.+.+.+++|.+++
T Consensus 62 --------~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 62 --------AGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp --------TTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred --------HhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 24578888877643 333433 44556777777665
No 485
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=79.30 E-value=6 Score=30.18 Aligned_cols=94 Identities=13% Similarity=0.138 Sum_probs=51.8
Q ss_pred CCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhh
Q 022597 120 AQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 198 (294)
Q Consensus 120 ~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~ 198 (294)
.++|+=+|+ |..+..++..+. .+.+|+.+|.+++..+.++ ..+ ..++.+|..+.
T Consensus 6 ~~~v~I~G~-----------------G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~----~~~~~~d~~~~ 60 (144)
T 2hmt_A 6 NKQFAVIGL-----------------GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA----THAVIANATEE 60 (144)
T ss_dssp CCSEEEECC-----------------SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC----SEEEECCTTCH
T ss_pred CCcEEEECC-----------------CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC----CEEEEeCCCCH
Confidence 357999998 555555555542 2568999999987654322 112 35567776542
Q ss_pred HHHHhhcCCCCceeEEEEcCCcc-chHHHHHHHHhcccCCeEEE
Q 022597 199 LKALILNGEASSYDFAFVDAEKR-MYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 199 l~~l~~~~~~~~fD~vfiD~~~~-~~~~~~~~~~~lLkpgG~iv 241 (294)
..+... ..+.+|.|+...+.. ..........+.+.+. .++
T Consensus 61 -~~l~~~-~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii 101 (144)
T 2hmt_A 61 -NELLSL-GIRNFEYVIVAIGANIQASTLTTLLLKELDIP-NIW 101 (144)
T ss_dssp -HHHHTT-TGGGCSEEEECCCSCHHHHHHHHHHHHHTTCS-EEE
T ss_pred -HHHHhc-CCCCCCEEEECCCCchHHHHHHHHHHHHcCCC-eEE
Confidence 222111 125799999877643 2222233334445665 444
No 486
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=79.26 E-value=13 Score=27.74 Aligned_cols=78 Identities=17% Similarity=-0.018 Sum_probs=53.8
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc---cchHHHHHHHHhccc
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK---RMYQEYFELLLQLIR 235 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~---~~~~~~~~~~~~lLk 235 (294)
..+|..+|-++...+..++.++..|+. +.....+..+.+..+. ...+|+|++|... ..-.++++.+.+. .
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~~a~~~~~----~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~ 81 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGYD--VLGVFDNGEEAVRCAP----DLRPDIALVDIMLCGALDGVETAARLAAG-C 81 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTCE--EEEEESSHHHHHHHHH----HHCCSEEEEESSCCSSSCHHHHHHHHHHH-S
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCe--eEEEECCHHHHHHHHH----hCCCCEEEEecCCCCCCCHHHHHHHHHhC-C
Confidence 468999999999999999999988762 4434566666665543 2469999999643 2445677777665 3
Q ss_pred CCeEEEEe
Q 022597 236 VGGIIVID 243 (294)
Q Consensus 236 pgG~ivid 243 (294)
.--+|++.
T Consensus 82 ~~~ii~ls 89 (140)
T 3cg0_A 82 NLPIIFIT 89 (140)
T ss_dssp CCCEEEEE
T ss_pred CCCEEEEe
Confidence 33455554
No 487
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=79.18 E-value=8.6 Score=37.19 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=52.4
Q ss_pred cHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHH------------HHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCcee
Q 022597 146 GYSSLAIALVLP-ESGCLVACERDARSLEVAKK------------YYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 212 (294)
Q Consensus 146 G~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~------------~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD 212 (294)
||.++.++..+. .+-+|+++|+|++.++..++ .++++--..++++. .|..+.+ ..-|
T Consensus 30 GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~t-t~~~~ai---------~~ad 99 (444)
T 3vtf_A 30 GYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFA-ESAEEAV---------AATD 99 (444)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEC-SSHHHHH---------HTSS
T ss_pred CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEE-cCHHHHH---------hcCC
Confidence 777776666553 25789999999998765432 11111011233332 2222221 2346
Q ss_pred EEEEcCC-------cc---chHHHHHHHHhcccC---CeEEEEecccCCCc
Q 022597 213 FAFVDAE-------KR---MYQEYFELLLQLIRV---GGIIVIDNVLWHGK 250 (294)
Q Consensus 213 ~vfiD~~-------~~---~~~~~~~~~~~lLkp---gG~ivid~vl~~g~ 250 (294)
++|+-.+ .. ......+.+.+.|++ |-++|+....+.|.
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGt 150 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGT 150 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTT
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCch
Confidence 7776543 11 134455566677774 45788888877775
No 488
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=78.97 E-value=7.1 Score=30.66 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=52.8
Q ss_pred HhhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEE-
Q 022597 115 VQILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH- 192 (294)
Q Consensus 115 ~~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~- 192 (294)
+....+++|+=||+ |..+..++..+. .+.+|+.++.+++..+.. .++.|. .+..
T Consensus 16 ~~~~~~~~v~iiG~-----------------G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~---a~~~~~----~~~~~ 71 (144)
T 3oj0_A 16 VRKNGGNKILLVGN-----------------GMLASEIAPYFSYPQYKVTVAGRNIDHVRAF---AEKYEY----EYVLI 71 (144)
T ss_dssp HHHHCCCEEEEECC-----------------SHHHHHHGGGCCTTTCEEEEEESCHHHHHHH---HHHHTC----EEEEC
T ss_pred HHhccCCEEEEECC-----------------CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHH---HHHhCC----ceEee
Confidence 33345789999998 667777777764 345699999999876543 333342 2221
Q ss_pred cchhhhHHHHhhcCCCCceeEEEEcCCccchHHHHHHHHhcccCCeEEE
Q 022597 193 GLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 241 (294)
Q Consensus 193 gda~~~l~~l~~~~~~~~fD~vfiD~~~~~~~~~~~~~~~lLkpgG~iv 241 (294)
.+..+. + ..+|+|+.-.+..... + -...+++|+.++
T Consensus 72 ~~~~~~---~------~~~Divi~at~~~~~~--~--~~~~l~~g~~vi 107 (144)
T 3oj0_A 72 NDIDSL---I------KNNDVIITATSSKTPI--V--EERSLMPGKLFI 107 (144)
T ss_dssp SCHHHH---H------HTCSEEEECSCCSSCS--B--CGGGCCTTCEEE
T ss_pred cCHHHH---h------cCCCEEEEeCCCCCcE--e--eHHHcCCCCEEE
Confidence 222222 1 3589998876533211 1 125678876554
No 489
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=78.81 E-value=20 Score=31.04 Aligned_cols=83 Identities=19% Similarity=0.101 Sum_probs=50.7
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCCh---HHHHHHHHHHHHhCCCCcEEEEEcc
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDA---RSLEVAKKYYERAGVSHKVKIKHGL 194 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~---~~~~~A~~~~~~~gl~~~v~~~~gd 194 (294)
.++++|-.|.+. ..+.++++.+. .+.+|+.++.+. +.++...+.++..| .++.++..|
T Consensus 10 ~~k~vlVTGas~----------------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~D 71 (262)
T 3ksu_A 10 KNKVIVIAGGIK----------------NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSD 71 (262)
T ss_dssp TTCEEEEETCSS----------------HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECC
T ss_pred CCCEEEEECCCc----------------hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECC
Confidence 456888888864 46677777664 467899887654 44444444454433 468888888
Q ss_pred hhhh--HHHHhhcC--CCCceeEEEEcCC
Q 022597 195 AADS--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 195 a~~~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
..+. +..+...- ..+..|.++..++
T Consensus 72 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 72 LSNEEEVAKLFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp CCSHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7542 22221100 0257999988765
No 490
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=78.74 E-value=2.5 Score=37.89 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=56.2
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCCC-CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~-~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
.+|-=||+ |..+..++..+.. +.+|+++|++++..+.+.+ .| +++ ..+ +
T Consensus 16 ~~I~vIG~-----------------G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g----~~~-~~~----~ 65 (296)
T 3qha_A 16 LKLGYIGL-----------------GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AG----ATL-ADS----V 65 (296)
T ss_dssp CCEEEECC-----------------STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TT----CEE-CSS----H
T ss_pred CeEEEECc-----------------CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CC----CEE-cCC----H
Confidence 47888898 5566677766543 4689999999987665443 23 222 122 2
Q ss_pred HHHhhcCCCCceeEEEEcCCc-cchHHHHHHHHhcccCCeEEEE
Q 022597 200 KALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLIRVGGIIVI 242 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~~-~~~~~~~~~~~~lLkpgG~ivi 242 (294)
.++ .. .|+||+-.+. ....+.++.+.+.+++|.+++-
T Consensus 66 ~~~-----~~-aDvvi~~vp~~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 66 ADV-----AA-ADLIHITVLDDAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHH-----TT-SSEEEECCSSHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHH-----Hh-CCEEEEECCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 333 34 8999988763 3456677788888888876653
No 491
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=78.64 E-value=3 Score=40.40 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHHHHH----hhhCCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCC----CcEEEEEeCChHHH
Q 022597 101 MQVSPDQAQLLAMLV----QILGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPE----SGCLVACERDARSL 172 (294)
Q Consensus 101 ~~v~~~~~~lL~~l~----~~~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~----~~~v~~id~~~~~~ 172 (294)
+.++|..|++|+..+ +..++-+++|+|.|+ |.....+++.+.. ..+++.||+|+...
T Consensus 115 PeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~---------------GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr 179 (432)
T 4f3n_A 115 PELSPLFAQTLARPVAQALDASGTRRVMEFGAGT---------------GKLAAGLLTALAALGVELDEYAIVDLSGELR 179 (432)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTT---------------SHHHHHHHHHHHHTTCCCSEEEEECTTSSSH
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCc---------------cHHHHHHHHHHHhcCCCCceEEEEEcCHHHH
Confidence 445565566664432 334567999999999 9988888776531 34899999999988
Q ss_pred HHHHHHHHH
Q 022597 173 EVAKKYYER 181 (294)
Q Consensus 173 ~~A~~~~~~ 181 (294)
+.-++.+..
T Consensus 180 ~~Q~~~L~~ 188 (432)
T 4f3n_A 180 ARQRETLGA 188 (432)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 877777764
No 492
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=78.44 E-value=2.6 Score=40.44 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=34.6
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHCCCCcEEEEEeCChHHHHHHHH
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLPESGCLVACERDARSLEVAKK 177 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~~~~~v~~id~~~~~~~~A~~ 177 (294)
.+.+|+=+|+|.+ |.....++..+ +++|+++|++++.++.+++
T Consensus 189 ~~~kV~ViG~G~i--------------G~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVA--------------GLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHH--------------HHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHH--------------HHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 5679999999874 77777777777 5799999999988776654
No 493
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=78.42 E-value=20 Score=27.48 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=52.2
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc--chHHHHHHHHhcccC
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR--MYQEYFELLLQLIRV 236 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~--~~~~~~~~~~~lLkp 236 (294)
..+|..+|-++...+..+..++..|+ .+. ...+..+.+..+. ...+|+|++|...+ .-.++++.+.+.-..
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 79 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK----GTSVQLVISDMRMPEMGGEVFLEQVAKSYPD 79 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT----TSCCSEEEEESSCSSSCHHHHHHHHHHHCTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh----cCCCCEEEEecCCCCCCHHHHHHHHHHhCCC
Confidence 46899999999999999999998775 244 4556666665553 45799999997532 345666666554333
Q ss_pred CeEEEEe
Q 022597 237 GGIIVID 243 (294)
Q Consensus 237 gG~ivid 243 (294)
--+|++.
T Consensus 80 ~~ii~ls 86 (154)
T 2rjn_A 80 IERVVIS 86 (154)
T ss_dssp SEEEEEE
T ss_pred CcEEEEe
Confidence 3455553
No 494
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=78.29 E-value=14 Score=28.28 Aligned_cols=81 Identities=14% Similarity=0.006 Sum_probs=53.5
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCC--ccchHHHHHHHHhcccC
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRV 236 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~--~~~~~~~~~~~~~lLkp 236 (294)
..+|..+|-++...+..++.++..|... +-....+..+.+..+. ...+|+|++|.. ...-.++++.+.+.-..
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~ 89 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVN-VVGEADDGAAALELIK----AHLPDVALLDYRMPGMDGAQVAAAVRSYELP 89 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEE-EEEEESSHHHHHHHHH----HHCCSEEEEETTCSSSCHHHHHHHHHHTTCS
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeE-EEEEeCCHHHHHHHHH----hcCCCEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 5789999999999999999999887421 2224556666665553 357999999965 23345666666654322
Q ss_pred CeEEEEec
Q 022597 237 GGIIVIDN 244 (294)
Q Consensus 237 gG~ivid~ 244 (294)
--+|++..
T Consensus 90 ~~ii~~s~ 97 (152)
T 3eul_A 90 TRVLLISA 97 (152)
T ss_dssp CEEEEEES
T ss_pred CeEEEEEc
Confidence 23555443
No 495
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=78.06 E-value=17 Score=27.05 Aligned_cols=77 Identities=9% Similarity=0.062 Sum_probs=51.8
Q ss_pred cEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCcc-------chHHHHHHHHh
Q 022597 160 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQ 232 (294)
Q Consensus 160 ~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~~-------~~~~~~~~~~~ 232 (294)
.+|..+|-++...+..++.++..|+ .+. ...+..+.+..+. ...+|+|++|.... .-.++++.+.+
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~----~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~ 76 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFS--KVI-TLSSPVSLSTVLR----EENPEVVLLDMNFTSGINNGNEGLFWLHEIKR 76 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSS--EEE-EECCHHHHHHHHH----HSCEEEEEEETTTTC-----CCHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHH----cCCCCEEEEeCCcCCCCCCCccHHHHHHHHHh
Confidence 5788999999999999999987765 244 3455555555543 35799999997532 34566666666
Q ss_pred cccCCeEEEEe
Q 022597 233 LIRVGGIIVID 243 (294)
Q Consensus 233 lLkpgG~ivid 243 (294)
....--+|++.
T Consensus 77 ~~~~~~ii~ls 87 (140)
T 2qr3_A 77 QYRDLPVVLFT 87 (140)
T ss_dssp HCTTCCEEEEE
T ss_pred hCcCCCEEEEE
Confidence 53333455554
No 496
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=78.01 E-value=29 Score=29.53 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=50.8
Q ss_pred CCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhh
Q 022597 119 GAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 197 (294)
Q Consensus 119 ~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~ 197 (294)
.++++|=.|++. ..+.++++.+ ..+.+|+.++.+++.++...+.+ ..++.++..|..+
T Consensus 8 ~~k~vlITGas~----------------gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~ 66 (261)
T 3n74_A 8 EGKVALITGAGS----------------GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISK 66 (261)
T ss_dssp TTCEEEEETTTS----------------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTS
T ss_pred CCCEEEEECCCc----------------hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCC
Confidence 456888888864 4555666655 24689999999998776554433 3468888888754
Q ss_pred h--HHHHhhcC--CCCceeEEEEcCC
Q 022597 198 S--LKALILNG--EASSYDFAFVDAE 219 (294)
Q Consensus 198 ~--l~~l~~~~--~~~~fD~vfiD~~ 219 (294)
. ++.+...- ..+.+|.++..++
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 2 22221100 0257899987654
No 497
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=78.00 E-value=14 Score=27.39 Aligned_cols=76 Identities=8% Similarity=0.123 Sum_probs=50.7
Q ss_pred EEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccCC-
Q 022597 161 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVG- 237 (294)
Q Consensus 161 ~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkpg- 237 (294)
+|..+|-++...+..++.++..|. .+.....+..+.+..+. ...+|+|++|... .+-.++++.+.+. .|+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~~ 75 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE----TLKPDIVIIDVDIPGVNGIQVLETLRKR-QYSG 75 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCCS
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH----hcCCCEEEEecCCCCCChHHHHHHHHhc-CCCC
Confidence 688899999999999999998773 23324556656555543 3579999999752 3345667666654 344
Q ss_pred eEEEEe
Q 022597 238 GIIVID 243 (294)
Q Consensus 238 G~ivid 243 (294)
-++++.
T Consensus 76 ~ii~~s 81 (134)
T 3f6c_A 76 IIIIVS 81 (134)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 344443
No 498
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=77.99 E-value=1.7 Score=38.59 Aligned_cols=86 Identities=19% Similarity=0.137 Sum_probs=53.8
Q ss_pred CeEEEEccccccccccccccccCCCcHHHHHHHHHCC-CCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhH
Q 022597 121 QRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 199 (294)
Q Consensus 121 ~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~~-~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l 199 (294)
++|-=||+ |..+..++..+. .+.+|+.+|++++..+.+.+ .|. +. ..+..+.+
T Consensus 2 ~~i~iIG~-----------------G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~----~~-~~~~~~~~ 55 (287)
T 3pef_A 2 QKFGFIGL-----------------GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA----LGA----ER-AATPCEVV 55 (287)
T ss_dssp CEEEEECC-----------------SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH----TTC----EE-CSSHHHHH
T ss_pred CEEEEEee-----------------cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----CCC----ee-cCCHHHHH
Confidence 36777888 666666666553 25689999999987665443 232 22 12333322
Q ss_pred HHHhhcCCCCceeEEEEcCC-ccchHHHH---HHHHhcccCCeEEE
Q 022597 200 KALILNGEASSYDFAFVDAE-KRMYQEYF---ELLLQLIRVGGIIV 241 (294)
Q Consensus 200 ~~l~~~~~~~~fD~vfiD~~-~~~~~~~~---~~~~~lLkpgG~iv 241 (294)
...|+||+-.+ .....+.+ +.+.+.+++|.+++
T Consensus 56 ---------~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi 92 (287)
T 3pef_A 56 ---------ESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYV 92 (287)
T ss_dssp ---------HHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEE
T ss_pred ---------hcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEE
Confidence 34699998876 34555666 66677788887654
No 499
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.94 E-value=16 Score=31.61 Aligned_cols=84 Identities=18% Similarity=0.115 Sum_probs=56.9
Q ss_pred hCCCeEEEEccccccccccccccccCCCcHHHHHHHHHC-CCCcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchh
Q 022597 118 LGAQRCIEVGVYTVCVSSYSTSILSLFSGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 196 (294)
Q Consensus 118 ~~~~~vLEiG~g~~~~~~~~~~~~~~~aG~~sl~la~~~-~~~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~ 196 (294)
..++++|-.|++. | .+.++++.+ ..+.+|+.++.+++.++.+.+.++..| .++.++..|..
T Consensus 9 l~~k~vlVTGas~---------------g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~ 70 (264)
T 3ucx_A 9 LTDKVVVISGVGP---------------A-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDIT 70 (264)
T ss_dssp TTTCEEEEESCCT---------------T-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTT
T ss_pred cCCcEEEEECCCc---------------H-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCC
Confidence 4567899989865 4 555555554 246899999999998888877777655 46888888876
Q ss_pred hh--HHHHhhc--CCCCceeEEEEcCC
Q 022597 197 DS--LKALILN--GEASSYDFAFVDAE 219 (294)
Q Consensus 197 ~~--l~~l~~~--~~~~~fD~vfiD~~ 219 (294)
+. +..+... ...++.|.++..++
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 71 DDAQVAHLVDETMKAYGRVDVVINNAF 97 (264)
T ss_dssp CHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 42 2222110 01357999987763
No 500
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=77.93 E-value=18 Score=26.61 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=52.0
Q ss_pred CcEEEEEeCChHHHHHHHHHHHHhCCCCcEEEEEcchhhhHHHHhhcCCCCceeEEEEcCCc--cchHHHHHHHHhcccC
Q 022597 159 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRV 236 (294)
Q Consensus 159 ~~~v~~id~~~~~~~~A~~~~~~~gl~~~v~~~~gda~~~l~~l~~~~~~~~fD~vfiD~~~--~~~~~~~~~~~~lLkp 236 (294)
+.+|..+|-++...+..++.++..|.. +. ...+..+.+..+. ..++|+|++|... ..-.++++.+.+.-..
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 79 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGAT--TV-LAADGVDALELLG----GFTPDLMICDIAMPRMNGLKLLEHIRNRGDQ 79 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCE--EE-EESCHHHHHHHHT----TCCCSEEEECCC-----CHHHHHHHHHTTCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCce--EE-EeCCHHHHHHHHh----cCCCCEEEEecCCCCCCHHHHHHHHHhcCCC
Confidence 468999999999999999999998763 43 3556666666552 4679999999752 2345666666654333
Q ss_pred CeEEEEe
Q 022597 237 GGIIVID 243 (294)
Q Consensus 237 gG~ivid 243 (294)
--++++.
T Consensus 80 ~~ii~~t 86 (130)
T 3eod_A 80 TPVLVIS 86 (130)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 3445443
Done!