Query 022600
Match_columns 294
No_of_seqs 15 out of 17
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 08:06:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022600.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022600hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv3a_ g.39.1.9 (A:) Hypothet 39.8 4.7 0.00034 28.1 1.1 17 61-78 20-36 (65)
2 d1pdaa2 d.50.2.1 (A:220-307) P 24.7 11 0.00079 26.2 0.9 14 180-193 14-27 (88)
3 d2p06a1 a.204.1.3 (A:1-84) Hyp 21.0 9.6 0.0007 27.7 -0.0 19 6-25 49-67 (84)
4 d1jdwa_ d.126.1.2 (A:) L-argin 19.7 12 0.00086 28.5 0.3 13 149-161 334-346 (360)
5 d2e74e1 f.23.24.1 (E:1-32) Pet 17.6 47 0.0034 20.4 2.7 18 162-181 2-19 (32)
6 d1yu8x1 a.14.1.1 (X:42-76) Vil 12.2 47 0.0035 20.5 1.7 16 8-23 6-22 (35)
7 d1h70a_ d.126.1.3 (A:) Dimethy 11.7 26 0.0019 26.7 0.3 23 139-162 229-253 (255)
8 d1unda_ a.14.1.1 (A:) Advillin 11.3 55 0.004 20.3 1.8 16 8-23 7-23 (36)
9 d2a6qa1 d.306.1.1 (A:10-92) An 10.8 29 0.0021 24.1 0.3 15 12-26 39-53 (83)
10 d1bwda_ d.126.1.2 (A:) L-argin 10.4 31 0.0022 26.5 0.3 7 154-160 327-333 (348)
No 1
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]}
Probab=39.76 E-value=4.7 Score=28.10 Aligned_cols=17 Identities=41% Similarity=0.598 Sum_probs=11.2
Q ss_pred cCCCCCCccccccccccc
Q 022600 61 SDYGRRPFCSDVRLQPLQ 78 (294)
Q Consensus 61 ~~~~~rpFC~~rRL~~l~ 78 (294)
.+..-||||++ |=+-+-
T Consensus 20 ~~~~~rPFCS~-RCk~ID 36 (65)
T d1lv3a_ 20 EISPFRPFCSK-RCQLID 36 (65)
T ss_dssp SSSSCCSSSSH-HHHHHH
T ss_pred CCCCcCCchhH-hhhhcc
Confidence 34567999998 644333
No 2
>d1pdaa2 d.50.2.1 (A:220-307) Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.66 E-value=11 Score=26.21 Aligned_cols=14 Identities=29% Similarity=0.605 Sum_probs=11.8
Q ss_pred hhhhhcCCCCCcch
Q 022600 180 SSLLTLGSSCSVPL 193 (294)
Q Consensus 180 sslLtLgssCSipL 193 (294)
++|=+||.+|+.|+
T Consensus 14 ~fL~~L~ggC~~PI 27 (88)
T d1pdaa2 14 AMNTRLEGACQVPI 27 (88)
T ss_dssp HHHHHTTCCTTSCE
T ss_pred HHHHHhCCCCCCcc
Confidence 45678999999996
No 3
>d2p06a1 a.204.1.3 (A:1-84) Hypothetical protein AF0060 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.00 E-value=9.6 Score=27.74 Aligned_cols=19 Identities=42% Similarity=0.749 Sum_probs=12.4
Q ss_pred HHHHhhcCChhHHhhhhhhh
Q 022600 6 DALRQAFMPKHEYERIREED 25 (294)
Q Consensus 6 DALrQaFMpk~~Ye~LReee 25 (294)
|-||.| .-|+|||.||+|-
T Consensus 49 delrea-vekedwenlrdel 67 (84)
T d2p06a1 49 DELREA-VEKEDWENLRDEL 67 (84)
T ss_dssp HHHHHH-HHTTCHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHH
Confidence 566664 4567777777763
No 4
>d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.66 E-value=12 Score=28.50 Aligned_cols=13 Identities=31% Similarity=0.619 Sum_probs=9.1
Q ss_pred cccccCCccchhh
Q 022600 149 YCASKRGGVRCLS 161 (294)
Q Consensus 149 ~CASkRGGVRCLs 161 (294)
-+.--|||+||++
T Consensus 334 e~~~~~GG~~CmT 346 (360)
T d1jdwa_ 334 NANSLGGGFHCWT 346 (360)
T ss_dssp HHHTTTCCTTTTE
T ss_pred hhhccCCCCeEeC
Confidence 3455688888875
No 5
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=17.56 E-value=47 Score=20.41 Aligned_cols=18 Identities=61% Similarity=1.058 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q 022600 162 ILNAVFAIIFGLLALFLGSS 181 (294)
Q Consensus 162 iLN~vFaiifgllAlfLGss 181 (294)
||..+|-|.| .|+|+|..
T Consensus 2 ilgavfyivf--ialffgia 19 (32)
T d2e74e1 2 ILGAVFYIVF--IALFFGIA 19 (32)
T ss_dssp HHHHHHHHHH--HHHHHHHH
T ss_pred eeeeeHHHHH--HHHHHHHH
Confidence 6788888876 46777753
No 6
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=12.22 E-value=47 Score=20.47 Aligned_cols=16 Identities=13% Similarity=0.480 Sum_probs=12.6
Q ss_pred HHhhc-CChhHHhhhhh
Q 022600 8 LRQAF-MPKHEYERIRE 23 (294)
Q Consensus 8 LrQaF-Mpk~~Ye~LRe 23 (294)
..+.| |+|+||..|+.
T Consensus 6 F~~vfgmsr~eF~~LP~ 22 (35)
T d1yu8x1 6 FKAVFGMTRSAFANLPL 22 (35)
T ss_dssp HHHHHSSCHHHHHTSCH
T ss_pred HHHHHCCCHHHHHHCcH
Confidence 34567 99999999974
No 7
>d1h70a_ d.126.1.3 (A:) Dimethylarginine dimethylaminohydrolase DDAH {Pseudomonas aeruginosa [TaxId: 287]}
Probab=11.67 E-value=26 Score=26.73 Aligned_cols=23 Identities=30% Similarity=0.457 Sum_probs=14.9
Q ss_pred cceeEEeec--ccccccCCccchhhh
Q 022600 139 HGCLNVVEN--NYCASKRGGVRCLSI 162 (294)
Q Consensus 139 H~clkVVEN--n~CASkRGGVRCLsi 162 (294)
||+ +|++- +-+..-.||+||++.
T Consensus 229 ~G~-~vi~vd~se~~k~GG~~~CmtL 253 (255)
T d1h70a_ 229 LGY-RVIEVDTSEYRKIDGGVSSMSL 253 (255)
T ss_dssp TTC-EEEEECCHHHHTTTCCTTTTCE
T ss_pred CCC-EEEEechHHHHhCCcCceeeee
Confidence 552 45444 446667788999984
No 8
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.30 E-value=55 Score=20.25 Aligned_cols=16 Identities=6% Similarity=0.387 Sum_probs=12.7
Q ss_pred HHhhc-CChhHHhhhhh
Q 022600 8 LRQAF-MPKHEYERIRE 23 (294)
Q Consensus 8 LrQaF-Mpk~~Ye~LRe 23 (294)
..+.| |+|+||..|+.
T Consensus 7 F~~vFgmsr~eF~~LP~ 23 (36)
T d1unda_ 7 FVSVFGITRGQFAALPG 23 (36)
T ss_dssp HHHHHSSCHHHHHHSCH
T ss_pred HHHHHCcCHHHHHHCcH
Confidence 34567 99999999974
No 9
>d2a6qa1 d.306.1.1 (A:10-92) Antitoxin YefM {Escherichia coli [TaxId: 562]}
Probab=10.78 E-value=29 Score=24.06 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=12.0
Q ss_pred cCChhHHhhhhhhhh
Q 022600 12 FMPKHEYERIREEDK 26 (294)
Q Consensus 12 FMpk~~Ye~LReeek 26 (294)
.||.+||++|.|--.
T Consensus 39 liS~~d~~sl~ETl~ 53 (83)
T d2a6qa1 39 LMSLEEYNSLEETAY 53 (83)
T ss_dssp EEEHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHH
Confidence 489999999987643
No 10
>d1bwda_ d.126.1.2 (A:) L-arginine: inosamine-phosphate amidinotransferase {Streptomyces griseus [TaxId: 1911]}
Probab=10.36 E-value=31 Score=26.54 Aligned_cols=7 Identities=43% Similarity=1.104 Sum_probs=3.6
Q ss_pred CCccchh
Q 022600 154 RGGVRCL 160 (294)
Q Consensus 154 RGGVRCL 160 (294)
+||+||+
T Consensus 327 ~GG~hC~ 333 (348)
T d1bwda_ 327 GGGFHCA 333 (348)
T ss_dssp TCCTTTT
T ss_pred CCCCeEe
Confidence 4555554
Done!