Query 022605
Match_columns 294
No_of_seqs 293 out of 2937
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:49:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022605.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022605hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 7.6E-37 1.6E-41 232.4 8.1 163 67-257 33-197 (226)
2 PHA02791 ankyrin-like protein; 100.0 8.1E-36 1.8E-40 254.3 11.6 188 67-258 25-220 (284)
3 PHA02946 ankyin-like protein; 100.0 1.1E-35 2.3E-40 270.4 7.5 236 51-289 51-313 (446)
4 PHA03100 ankyrin repeat protei 100.0 1.4E-35 3E-40 274.0 7.4 245 36-289 32-299 (480)
5 PHA02874 ankyrin repeat protei 100.0 1E-34 2.2E-39 264.7 10.5 239 35-284 31-299 (434)
6 PHA03095 ankyrin-like protein; 100.0 8.8E-35 1.9E-39 268.1 9.4 245 36-289 44-306 (471)
7 PHA02946 ankyin-like protein; 100.0 1.4E-34 3E-39 263.1 8.5 219 34-255 67-320 (446)
8 PHA02874 ankyrin repeat protei 100.0 2.4E-34 5.3E-39 262.3 10.0 231 43-284 5-265 (434)
9 KOG0509 Ankyrin repeat and DHH 100.0 2.1E-34 4.5E-39 256.9 9.2 202 41-242 46-255 (600)
10 PHA02716 CPXV016; CPX019; EVM0 100.0 3E-34 6.5E-39 269.7 10.4 240 38-286 176-548 (764)
11 PHA02875 ankyrin repeat protei 100.0 2.1E-34 4.5E-39 261.3 8.6 236 40-281 3-246 (413)
12 PHA03095 ankyrin-like protein; 100.0 3.2E-34 6.9E-39 264.3 10.0 235 46-289 21-273 (471)
13 PHA02716 CPXV016; CPX019; EVM0 100.0 3.5E-34 7.7E-39 269.2 8.4 207 48-255 151-426 (764)
14 PHA02878 ankyrin repeat protei 100.0 6.1E-34 1.3E-38 262.5 9.6 203 70-283 35-310 (477)
15 PHA02791 ankyrin-like protein; 100.0 3.5E-34 7.5E-39 244.3 7.0 213 35-257 26-245 (284)
16 PHA03100 ankyrin repeat protei 100.0 6.6E-34 1.4E-38 262.8 8.2 227 53-288 16-265 (480)
17 PHA02875 ankyrin repeat protei 100.0 1.6E-33 3.5E-38 255.5 10.1 209 72-289 2-218 (413)
18 PHA02989 ankyrin repeat protei 100.0 4E-33 8.7E-38 258.0 8.2 228 51-289 49-305 (494)
19 PHA02798 ankyrin-like protein; 100.0 6.7E-33 1.5E-37 256.2 8.0 229 49-287 48-305 (489)
20 KOG4412 26S proteasome regulat 100.0 4E-32 8.6E-37 206.7 8.8 173 39-240 37-212 (226)
21 PHA02878 ankyrin repeat protei 100.0 5.5E-32 1.2E-36 249.6 9.7 213 39-254 37-323 (477)
22 PHA02876 ankyrin repeat protei 100.0 1.2E-31 2.5E-36 257.4 9.9 237 47-284 153-453 (682)
23 PHA02876 ankyrin repeat protei 100.0 1.4E-31 3E-36 256.9 10.1 241 36-285 175-488 (682)
24 KOG0510 Ankyrin repeat protein 100.0 3.4E-31 7.3E-36 241.0 6.6 234 49-288 98-356 (929)
25 PHA02989 ankyrin repeat protei 100.0 1.1E-30 2.4E-35 241.7 8.7 203 53-257 89-314 (494)
26 KOG0510 Ankyrin repeat protein 100.0 1.2E-30 2.5E-35 237.5 8.3 236 36-279 151-416 (929)
27 KOG0509 Ankyrin repeat and DHH 100.0 1.1E-29 2.4E-34 226.7 11.8 203 72-283 44-255 (600)
28 PHA02798 ankyrin-like protein; 100.0 5.4E-30 1.2E-34 236.9 9.4 221 37-259 69-318 (489)
29 PHA02859 ankyrin repeat protei 100.0 3.6E-29 7.7E-34 205.8 13.2 177 69-284 18-203 (209)
30 KOG0508 Ankyrin repeat protein 100.0 2.2E-29 4.8E-34 216.9 10.9 185 67-253 37-236 (615)
31 KOG0508 Ankyrin repeat protein 100.0 9.2E-30 2E-34 219.3 7.2 185 34-220 37-236 (615)
32 PHA02859 ankyrin repeat protei 100.0 8.2E-29 1.8E-33 203.7 9.1 176 37-243 19-203 (209)
33 KOG4177 Ankyrin [Cell wall/mem 100.0 7.2E-30 1.6E-34 244.8 2.0 251 33-292 368-625 (1143)
34 PHA02917 ankyrin-like protein; 100.0 9.6E-29 2.1E-33 233.2 9.4 221 53-281 13-275 (661)
35 PHA02917 ankyrin-like protein; 100.0 1.2E-28 2.6E-33 232.6 9.8 232 45-285 109-498 (661)
36 PHA02795 ankyrin-like protein; 99.9 1.1E-27 2.4E-32 212.1 7.6 193 59-259 69-289 (437)
37 KOG0195 Integrin-linked kinase 99.9 4.9E-27 1.1E-31 191.3 10.5 230 43-273 4-275 (448)
38 PLN03192 Voltage-dependent pot 99.9 4.8E-26 1E-30 221.9 14.0 171 68-239 521-696 (823)
39 KOG0502 Integral membrane anky 99.9 4.1E-26 8.9E-31 179.1 10.6 203 37-278 94-296 (296)
40 PHA02730 ankyrin-like protein; 99.9 7.1E-26 1.5E-30 209.7 11.2 187 66-253 35-258 (672)
41 KOG4177 Ankyrin [Cell wall/mem 99.9 1.5E-25 3.4E-30 215.2 7.5 223 34-256 204-431 (1143)
42 PHA02730 ankyrin-like protein; 99.9 4.4E-25 9.5E-30 204.5 9.1 209 48-258 211-524 (672)
43 PHA02795 ankyrin-like protein; 99.9 1.2E-25 2.7E-30 199.2 5.2 190 84-286 60-267 (437)
44 PHA02792 ankyrin-like protein; 99.9 1.4E-25 3E-30 205.8 5.3 225 49-282 82-452 (631)
45 PLN03192 Voltage-dependent pot 99.9 1E-24 2.2E-29 212.6 9.9 169 37-208 523-698 (823)
46 KOG0514 Ankyrin repeat protein 99.9 1E-24 2.2E-29 182.8 6.9 162 65-255 261-430 (452)
47 KOG0505 Myosin phosphatase, re 99.9 8E-25 1.7E-29 191.9 5.5 228 44-282 45-273 (527)
48 PHA02741 hypothetical protein; 99.9 1.2E-23 2.5E-28 167.5 10.7 129 66-222 15-155 (169)
49 PHA02792 ankyrin-like protein; 99.9 6.3E-24 1.4E-28 195.0 8.2 218 63-288 62-425 (631)
50 PHA02743 Viral ankyrin protein 99.9 2.3E-23 4.9E-28 165.2 10.1 134 68-229 16-158 (166)
51 PHA02884 ankyrin repeat protei 99.9 5.3E-23 1.1E-27 175.7 12.7 148 67-223 27-186 (300)
52 TIGR00870 trp transient-recept 99.9 1.7E-23 3.6E-28 202.8 10.1 231 40-289 18-273 (743)
53 KOG0507 CASK-interacting adapt 99.9 1.5E-23 3.3E-28 190.1 8.4 191 65-257 42-246 (854)
54 KOG0512 Fetal globin-inducing 99.9 2.1E-23 4.5E-28 158.1 6.2 104 72-175 63-170 (228)
55 PHA02743 Viral ankyrin protein 99.9 6.5E-23 1.4E-27 162.6 9.5 132 36-167 17-157 (166)
56 PHA02736 Viral ankyrin protein 99.9 7.8E-23 1.7E-27 160.4 6.9 136 59-224 4-151 (154)
57 KOG0502 Integral membrane anky 99.9 8E-23 1.7E-27 160.6 2.2 203 46-286 69-272 (296)
58 PF12796 Ank_2: Ankyrin repeat 99.9 4.6E-21 1E-25 136.1 11.0 88 76-167 1-88 (89)
59 KOG0512 Fetal globin-inducing 99.8 6.5E-22 1.4E-26 150.0 4.4 142 44-185 68-215 (228)
60 KOG4369 RTK signaling protein 99.8 1.6E-21 3.5E-26 182.5 6.3 227 31-258 749-985 (2131)
61 TIGR00870 trp transient-recept 99.8 4.3E-21 9.2E-26 186.0 9.3 188 70-284 15-219 (743)
62 PHA02884 ankyrin repeat protei 99.8 4.9E-21 1.1E-25 163.7 7.9 149 38-188 31-185 (300)
63 KOG0514 Ankyrin repeat protein 99.8 1.5E-21 3.3E-26 163.9 3.6 154 98-286 261-420 (452)
64 PHA02741 hypothetical protein; 99.8 1.2E-20 2.6E-25 150.1 8.3 129 36-164 18-158 (169)
65 KOG0507 CASK-interacting adapt 99.8 5.8E-21 1.3E-25 173.5 5.7 215 37-253 47-278 (854)
66 PHA02736 Viral ankyrin protein 99.8 4.6E-20 1E-24 144.7 8.8 130 36-165 14-153 (154)
67 KOG4369 RTK signaling protein 99.8 7.9E-21 1.7E-25 177.9 2.2 208 69-284 754-970 (2131)
68 KOG0195 Integrin-linked kinase 99.8 4.5E-20 9.8E-25 150.8 2.5 150 80-257 8-158 (448)
69 cd00204 ANK ankyrin repeats; 99.8 3.3E-18 7.2E-23 128.3 12.4 124 68-219 3-126 (126)
70 KOG0505 Myosin phosphatase, re 99.8 3.7E-19 7.9E-24 156.6 7.9 194 75-285 43-243 (527)
71 KOG4214 Myotrophin and similar 99.7 3.2E-18 7E-23 116.5 6.0 93 74-167 4-96 (117)
72 PF12796 Ank_2: Ankyrin repeat 99.7 6.2E-18 1.4E-22 119.9 4.9 87 45-135 3-89 (89)
73 COG0666 Arp FOG: Ankyrin repea 99.7 4.7E-16 1E-20 128.7 13.4 129 66-222 67-203 (235)
74 KOG3676 Ca2+-permeable cation 99.7 5.2E-17 1.1E-21 149.5 7.7 112 68-179 180-319 (782)
75 PTZ00322 6-phosphofructo-2-kin 99.7 4.3E-16 9.2E-21 148.5 12.9 102 74-175 84-195 (664)
76 KOG3676 Ca2+-permeable cation 99.7 8.5E-17 1.9E-21 148.2 7.2 186 41-254 103-330 (782)
77 PF13857 Ank_5: Ankyrin repeat 99.7 9.1E-17 2E-21 103.2 4.7 55 91-145 1-56 (56)
78 cd00204 ANK ankyrin repeats; 99.6 1E-15 2.2E-20 114.7 9.1 122 37-158 5-126 (126)
79 KOG4214 Myotrophin and similar 99.6 1.3E-16 2.9E-21 108.6 3.8 95 48-143 11-105 (117)
80 PF13637 Ank_4: Ankyrin repeat 99.6 6.8E-16 1.5E-20 98.5 6.3 54 72-125 1-54 (54)
81 KOG0515 p53-interacting protei 99.6 3.1E-16 6.7E-21 137.6 4.9 104 72-175 550-657 (752)
82 PF13637 Ank_4: Ankyrin repeat 99.6 1.5E-15 3.2E-20 96.9 6.5 54 105-158 1-54 (54)
83 COG0666 Arp FOG: Ankyrin repea 99.6 6E-15 1.3E-19 122.0 8.1 122 40-161 74-203 (235)
84 KOG1710 MYND Zn-finger and ank 99.6 3.3E-15 7.2E-20 122.3 5.9 118 41-158 14-132 (396)
85 KOG0515 p53-interacting protei 99.6 8.9E-15 1.9E-19 128.6 8.7 118 43-160 554-674 (752)
86 KOG1710 MYND Zn-finger and ank 99.5 4.6E-14 1E-18 115.7 8.1 94 71-164 11-105 (396)
87 PF13857 Ank_5: Ankyrin repeat 99.5 4.2E-14 9.1E-19 90.7 4.7 50 63-112 7-56 (56)
88 PTZ00322 6-phosphofructo-2-kin 99.5 1.2E-13 2.5E-18 131.9 7.3 104 43-146 86-196 (664)
89 KOG0506 Glutaminase (contains 99.2 1.9E-11 4.2E-16 106.6 6.2 97 67-163 501-598 (622)
90 KOG0818 GTPase-activating prot 99.2 1.8E-10 3.8E-15 101.1 9.6 89 74-162 135-224 (669)
91 PF13606 Ank_3: Ankyrin repeat 99.1 5.9E-11 1.3E-15 65.3 4.0 28 105-132 2-29 (30)
92 KOG0783 Uncharacterized conser 99.1 2.5E-11 5.4E-16 112.3 3.4 84 65-148 45-129 (1267)
93 PF00023 Ank: Ankyrin repeat H 99.0 3.5E-10 7.5E-15 64.0 4.3 32 104-135 1-32 (33)
94 PF13606 Ank_3: Ankyrin repeat 99.0 3.6E-10 7.8E-15 62.2 3.7 30 71-100 1-30 (30)
95 KOG0705 GTPase-activating prot 99.0 1.1E-09 2.4E-14 97.9 8.4 92 74-165 626-721 (749)
96 KOG0782 Predicted diacylglycer 99.0 5.1E-10 1.1E-14 99.8 4.6 98 63-160 890-989 (1004)
97 PF00023 Ank: Ankyrin repeat H 99.0 1.1E-09 2.4E-14 61.9 4.2 33 71-103 1-33 (33)
98 KOG0783 Uncharacterized conser 98.9 2.5E-10 5.3E-15 105.9 1.6 90 88-177 33-128 (1267)
99 KOG0522 Ankyrin repeat protein 98.9 3.4E-09 7.4E-14 94.1 7.7 87 74-160 22-110 (560)
100 KOG0506 Glutaminase (contains 98.9 6.9E-10 1.5E-14 97.1 1.6 88 41-128 508-596 (622)
101 KOG2384 Major histocompatibili 98.7 6.7E-08 1.4E-12 75.2 7.0 66 95-160 2-68 (223)
102 KOG0521 Putative GTPase activa 98.7 2.1E-08 4.6E-13 96.1 4.9 91 85-175 634-729 (785)
103 KOG3609 Receptor-activated Ca2 98.7 1.5E-08 3.3E-13 94.9 3.5 235 45-290 31-288 (822)
104 KOG0782 Predicted diacylglycer 98.7 2.9E-08 6.2E-13 88.9 5.1 89 76-164 870-960 (1004)
105 KOG3609 Receptor-activated Ca2 98.6 5.9E-08 1.3E-12 91.0 6.8 135 71-230 24-162 (822)
106 KOG0511 Ankyrin repeat protein 98.6 9.5E-08 2.1E-12 81.8 7.3 85 73-160 37-121 (516)
107 KOG0705 GTPase-activating prot 98.6 9.1E-08 2E-12 85.9 6.2 66 67-132 656-721 (749)
108 KOG0818 GTPase-activating prot 98.6 4.8E-08 1E-12 86.2 4.1 87 40-126 134-221 (669)
109 KOG0522 Ankyrin repeat protein 98.5 2.3E-07 5E-12 82.7 6.6 67 61-127 44-110 (560)
110 KOG0511 Ankyrin repeat protein 98.4 4.3E-07 9.2E-12 77.9 6.5 60 108-167 39-98 (516)
111 KOG0520 Uncharacterized conser 98.4 2.4E-07 5.1E-12 88.8 4.4 110 66-176 568-688 (975)
112 KOG2384 Major histocompatibili 98.4 1.7E-06 3.6E-11 67.6 7.2 73 64-136 4-77 (223)
113 KOG0521 Putative GTPase activa 98.4 4.4E-07 9.5E-12 87.2 4.9 88 71-158 655-742 (785)
114 KOG0520 Uncharacterized conser 98.0 2E-06 4.3E-11 82.7 0.4 116 44-160 579-702 (975)
115 smart00248 ANK ankyrin repeats 97.6 0.00011 2.4E-09 38.8 4.0 27 105-131 2-28 (30)
116 KOG2505 Ankyrin repeat protein 97.6 0.00016 3.4E-09 64.6 5.9 71 85-158 404-480 (591)
117 smart00248 ANK ankyrin repeats 97.3 0.0004 8.8E-09 36.5 3.8 29 71-99 1-29 (30)
118 KOG2505 Ankyrin repeat protein 96.9 0.00079 1.7E-08 60.3 3.7 69 117-185 403-480 (591)
119 KOG0192 Tyrosine kinase specif 96.2 0.0054 1.2E-07 54.6 3.9 93 183-276 36-131 (362)
120 PF06128 Shigella_OspC: Shigel 95.9 0.074 1.6E-06 43.3 8.9 92 72-164 179-280 (284)
121 KOG4278 Protein tyrosine kinas 95.7 0.026 5.6E-07 52.8 6.2 90 181-274 260-352 (1157)
122 KOG1026 Nerve growth factor re 95.0 0.019 4.1E-07 55.1 2.9 60 212-273 518-577 (774)
123 PF06128 Shigella_OspC: Shigel 94.4 0.1 2.2E-06 42.6 5.3 48 82-129 227-278 (284)
124 KOG0197 Tyrosine kinases [Sign 93.5 0.061 1.3E-06 49.0 3.0 90 181-274 199-290 (468)
125 PF03158 DUF249: Multigene fam 93.3 0.13 2.8E-06 40.6 4.0 143 70-252 44-190 (192)
126 KOG1094 Discoidin domain recep 93.0 0.027 5.9E-07 52.2 0.0 81 191-273 541-623 (807)
127 KOG0595 Serine/threonine-prote 92.6 0.089 1.9E-06 46.7 2.5 61 212-273 37-97 (429)
128 KOG4721 Serine/threonine prote 92.3 0.055 1.2E-06 50.2 0.9 55 233-287 160-222 (904)
129 PF11929 DUF3447: Domain of un 91.7 0.4 8.7E-06 32.3 4.5 47 74-127 8-54 (76)
130 KOG1187 Serine/threonine prote 91.6 0.18 4E-06 45.0 3.5 71 201-274 89-161 (361)
131 PF11929 DUF3447: Domain of un 91.3 0.32 6.9E-06 32.8 3.7 47 107-160 8-54 (76)
132 KOG0578 p21-activated serine/t 89.1 0.44 9.6E-06 44.0 3.7 44 231-274 316-359 (550)
133 PF03158 DUF249: Multigene fam 87.9 1.2 2.6E-05 35.3 4.8 110 39-159 75-191 (192)
134 KOG0611 Predicted serine/threo 85.4 1.1 2.4E-05 40.2 3.9 68 208-275 76-143 (668)
135 PHA02988 hypothetical protein; 84.6 1.1 2.4E-05 38.3 3.6 74 200-273 33-110 (283)
136 KOG0196 Tyrosine kinase, EPH ( 84.1 0.3 6.6E-06 47.1 -0.2 60 212-273 659-718 (996)
137 KOG0194 Protein tyrosine kinas 84.1 0.72 1.6E-05 42.5 2.3 49 225-273 201-249 (474)
138 KOG1095 Protein tyrosine kinas 79.7 1.8 4E-05 43.6 3.4 50 224-273 734-783 (1025)
139 KOG0581 Mitogen-activated prot 79.7 1.6 3.4E-05 38.4 2.6 52 222-273 114-166 (364)
140 KOG0574 STE20-like serine/thre 78.6 1.9 4.1E-05 37.2 2.7 43 231-273 74-116 (502)
141 KOG0193 Serine/threonine prote 76.2 2.5 5.4E-05 39.9 3.0 86 185-273 389-475 (678)
142 KOG0605 NDR and related serine 76.1 1.2 2.6E-05 41.1 1.0 72 202-273 156-229 (550)
143 PF07714 Pkinase_Tyr: Protein 73.2 2 4.2E-05 36.1 1.5 70 202-273 14-89 (259)
144 KOG0615 Serine/threonine prote 72.5 2.6 5.5E-05 37.9 2.0 65 209-273 196-264 (475)
145 KOG0591 NIMA (never in mitosis 72.0 3.4 7.3E-05 35.4 2.6 54 220-273 53-108 (375)
146 KOG0593 Predicted protein kina 70.3 5.9 0.00013 34.4 3.7 60 210-270 27-86 (396)
147 cd05612 STKc_PRKX_like Catalyt 70.2 7.3 0.00016 33.3 4.4 42 232-273 48-89 (291)
148 cd05578 STKc_Yank1 Catalytic d 68.8 12 0.00027 30.9 5.5 64 210-273 25-88 (258)
149 KOG0200 Fibroblast/platelet-de 68.2 5.1 0.00011 38.6 3.3 60 213-274 331-391 (609)
150 KOG0582 Ste20-like serine/thre 66.4 4.3 9.2E-05 37.0 2.2 90 182-273 20-112 (516)
151 KOG0586 Serine/threonine prote 66.3 4 8.8E-05 38.4 2.1 63 210-273 81-143 (596)
152 KOG0610 Putative serine/threon 66.3 4.4 9.6E-05 36.5 2.2 46 228-273 120-165 (459)
153 cd05629 STKc_NDR_like_fungal C 64.2 3.2 7E-05 37.0 1.1 43 231-273 47-89 (377)
154 KOG0579 Ste20-like serine/thre 63.6 7.8 0.00017 37.2 3.3 44 230-273 74-117 (1187)
155 cd05039 PTKc_Csk_like Catalyti 61.3 9.6 0.00021 31.5 3.4 69 201-273 20-88 (256)
156 KOG0585 Ca2+/calmodulin-depend 60.9 8.9 0.00019 35.3 3.1 50 231-280 154-205 (576)
157 cd08229 STKc_Nek7 Catalytic do 60.8 13 0.00028 30.9 4.1 72 202-273 17-90 (267)
158 cd05064 PTKc_EphR_A10 Catalyti 59.9 11 0.00025 31.5 3.6 43 231-273 52-94 (266)
159 KOG0598 Ribosomal protein S6 k 59.5 8.2 0.00018 34.0 2.6 63 211-273 51-113 (357)
160 cd05625 STKc_LATS1 Catalytic d 59.5 4.6 0.0001 36.1 1.2 43 231-273 47-89 (382)
161 cd05572 STKc_cGK_PKG Catalytic 59.3 11 0.00023 31.4 3.3 44 230-273 38-81 (262)
162 cd05087 PTKc_Aatyk1_Aatyk3 Cat 59.1 15 0.00032 30.8 4.2 42 232-273 42-83 (269)
163 cd05595 STKc_PKB_beta Catalyti 59.0 5.5 0.00012 34.7 1.6 41 233-273 43-83 (323)
164 KOG0597 Serine-threonine prote 58.4 12 0.00026 35.4 3.6 69 202-272 17-87 (808)
165 cd05593 STKc_PKB_gamma Catalyt 58.3 6 0.00013 34.6 1.7 41 233-273 43-83 (328)
166 cd06650 PKc_MEK1 Catalytic dom 57.8 15 0.00032 32.1 4.1 44 230-273 48-91 (333)
167 PTZ00267 NIMA-related protein 57.8 11 0.00025 34.9 3.5 43 231-273 111-153 (478)
168 cd05573 STKc_ROCK_NDR_like Cat 57.2 11 0.00023 33.1 3.1 43 231-273 47-89 (350)
169 cd05600 STKc_Sid2p_Dbf2p Catal 57.1 5.2 0.00011 35.0 1.1 43 231-273 47-89 (333)
170 KOG0608 Warts/lats-like serine 56.8 8 0.00017 37.1 2.2 40 233-272 677-716 (1034)
171 cd05626 STKc_LATS2 Catalytic d 56.6 5.8 0.00013 35.5 1.3 43 231-273 47-89 (381)
172 KOG1595 CCCH-type Zn-finger pr 56.0 2.2 4.8E-05 39.3 -1.5 90 70-161 56-155 (528)
173 KOG4257 Focal adhesion tyrosin 56.0 10 0.00022 36.4 2.7 47 226-273 432-478 (974)
174 cd07846 STKc_CDKL2_3 Catalytic 55.7 26 0.00057 29.4 5.2 71 202-273 16-88 (286)
175 cd05585 STKc_YPK1_like Catalyt 55.4 6.4 0.00014 34.0 1.4 41 233-273 41-81 (312)
176 cd05598 STKc_LATS Catalytic do 55.3 5.3 0.00012 35.6 0.9 41 233-273 49-89 (376)
177 cd05107 PTKc_PDGFR_beta Cataly 54.8 15 0.00033 33.3 3.7 42 232-273 87-129 (401)
178 KOG0612 Rho-associated, coiled 54.7 16 0.00035 37.4 4.0 64 210-273 100-163 (1317)
179 KOG0588 Serine/threonine prote 54.5 6 0.00013 37.9 1.0 68 207-274 34-101 (786)
180 cd06649 PKc_MEK2 Catalytic dom 54.1 15 0.00033 32.0 3.5 44 230-273 48-91 (331)
181 cd05086 PTKc_Aatyk2 Catalytic 53.5 15 0.00033 30.7 3.3 43 231-273 41-83 (268)
182 cd05571 STKc_PKB Catalytic dom 53.2 7.1 0.00015 34.0 1.3 41 233-273 43-83 (323)
183 cd05608 STKc_GRK1 Catalytic do 53.1 8 0.00017 32.7 1.6 40 234-273 42-81 (280)
184 cd05605 STKc_GRK4_like Catalyt 53.0 9.1 0.0002 32.5 1.9 40 234-273 49-88 (285)
185 PTZ00263 protein kinase A cata 53.0 6.2 0.00013 34.5 0.9 42 232-273 65-106 (329)
186 cd05033 PTKc_EphR Catalytic do 52.3 26 0.00055 29.2 4.5 43 231-273 51-93 (266)
187 cd08224 STKc_Nek6_Nek7 Catalyt 52.2 19 0.00042 29.8 3.8 43 231-273 48-90 (267)
188 cd05579 STKc_MAST_like Catalyt 52.2 27 0.00058 28.7 4.7 42 232-273 40-81 (265)
189 cd05105 PTKc_PDGFR_alpha Catal 52.0 12 0.00026 34.0 2.6 43 231-273 86-129 (400)
190 cd05113 PTKc_Btk_Bmx Catalytic 51.9 18 0.00038 30.1 3.5 43 231-273 45-87 (256)
191 cd08227 PK_STRAD_alpha Pseudok 51.9 9.6 0.00021 33.2 1.9 43 231-273 45-87 (327)
192 KOG0576 Mitogen-activated prot 51.8 13 0.00028 35.9 2.7 62 209-273 39-100 (829)
193 cd05628 STKc_NDR1 Catalytic do 51.8 6.5 0.00014 34.9 0.8 41 233-273 49-89 (363)
194 cd06615 PKc_MEK Catalytic doma 51.8 18 0.00039 31.1 3.6 43 231-273 45-87 (308)
195 cd05601 STKc_CRIK Catalytic do 51.8 8.1 0.00018 33.6 1.4 43 231-273 47-89 (330)
196 cd05599 STKc_NDR_like Catalyti 51.7 6.2 0.00013 34.9 0.7 42 232-273 48-89 (364)
197 cd05123 STKc_AGC Catalytic dom 51.6 34 0.00074 27.9 5.2 43 231-273 39-81 (250)
198 KOG2052 Activin A type IB rece 51.6 14 0.00031 33.7 2.9 71 201-275 225-299 (513)
199 PLN00034 mitogen-activated pro 51.5 29 0.00063 30.5 5.0 63 210-274 99-161 (353)
200 cd05052 PTKc_Abl Catalytic dom 51.4 22 0.00048 29.6 4.0 42 232-273 49-90 (263)
201 PTZ00426 cAMP-dependent protei 51.3 7.3 0.00016 34.3 1.0 42 232-273 78-119 (340)
202 cd05042 PTKc_Aatyk Catalytic d 51.0 27 0.00058 29.1 4.5 41 233-273 43-83 (269)
203 cd05594 STKc_PKB_alpha Catalyt 50.0 8.8 0.00019 33.4 1.3 40 234-273 44-83 (325)
204 cd05588 STKc_aPKC Catalytic do 50.0 9.5 0.00021 33.3 1.6 40 234-273 44-84 (329)
205 cd05621 STKc_ROCK2 Catalytic d 49.9 7.8 0.00017 34.6 1.0 42 232-273 90-131 (370)
206 cd05597 STKc_DMPK_like Catalyt 49.6 8.5 0.00019 33.6 1.2 42 232-273 48-89 (331)
207 KOG0607 MAP kinase-interacting 49.6 46 0.001 29.4 5.5 65 206-272 99-163 (463)
208 cd05102 PTKc_VEGFR3 Catalytic 49.5 28 0.0006 30.3 4.5 42 232-273 57-100 (338)
209 cd05076 PTK_Tyk2_rpt1 Pseudoki 49.1 15 0.00033 30.9 2.7 42 232-273 63-104 (274)
210 cd05096 PTKc_DDR1 Catalytic do 48.7 15 0.00033 31.4 2.6 43 231-273 65-107 (304)
211 KOG3836 HLH transcription fact 48.6 4.5 9.7E-05 38.0 -0.7 53 79-131 403-455 (605)
212 cd06642 STKc_STK25-YSK1 Cataly 48.2 40 0.00087 28.2 5.2 44 230-273 47-90 (277)
213 cd05084 PTKc_Fes Catalytic dom 47.8 32 0.00069 28.3 4.4 44 230-273 38-81 (252)
214 cd05618 STKc_aPKC_iota Catalyt 46.7 13 0.00028 32.5 1.9 40 234-273 44-84 (329)
215 cd06620 PKc_MAPKK_Byr1_like Ca 46.7 24 0.00053 29.7 3.6 44 230-273 48-91 (284)
216 cd05596 STKc_ROCK Catalytic do 46.3 9.7 0.00021 34.0 1.1 41 233-273 91-131 (370)
217 KOG0575 Polo-like serine/threo 45.7 11 0.00024 35.6 1.3 43 231-273 64-106 (592)
218 cd05114 PTKc_Tec_Rlk Catalytic 45.6 31 0.00068 28.4 4.0 42 232-273 46-87 (256)
219 cd05065 PTKc_EphR_B Catalytic 45.5 35 0.00076 28.4 4.4 44 230-273 50-93 (269)
220 KOG4279 Serine/threonine prote 45.5 28 0.0006 34.1 3.8 48 226-273 609-660 (1226)
221 KOG0589 Serine/threonine prote 45.3 18 0.0004 33.0 2.6 41 233-273 51-92 (426)
222 cd05148 PTKc_Srm_Brk Catalytic 45.2 34 0.00073 28.2 4.2 43 231-273 48-90 (261)
223 KOG0513 Ca2+-independent phosp 45.0 41 0.0009 31.5 4.9 25 68-92 51-75 (503)
224 cd05580 STKc_PKA Catalytic dom 44.9 15 0.00032 31.2 1.9 43 231-273 47-89 (290)
225 KOG1709 Guanidinoacetate methy 44.5 22 0.00048 29.3 2.7 41 91-131 1-41 (271)
226 cd05085 PTKc_Fer Catalytic dom 44.2 36 0.00077 27.9 4.1 43 231-273 38-80 (250)
227 cd08221 STKc_Nek9 Catalytic do 44.0 22 0.00047 29.3 2.8 44 230-273 44-87 (256)
228 cd05622 STKc_ROCK1 Catalytic d 43.8 11 0.00023 33.8 0.9 41 233-273 91-131 (371)
229 PLN00113 leucine-rich repeat r 43.6 18 0.0004 36.8 2.7 38 236-273 734-771 (968)
230 cd06641 STKc_MST3 Catalytic do 43.5 27 0.00058 29.3 3.3 44 230-273 47-90 (277)
231 cd05627 STKc_NDR2 Catalytic do 43.4 10 0.00022 33.6 0.7 41 233-273 49-89 (360)
232 KOG4250 TANK binding protein k 43.3 32 0.0007 33.3 4.0 63 209-273 37-105 (732)
233 cd05610 STKc_MASTL Catalytic d 43.3 24 0.00051 34.5 3.3 71 203-273 20-92 (669)
234 cd06622 PKc_MAPKK_PBS2_like Ca 43.2 65 0.0014 27.0 5.7 43 231-273 45-87 (286)
235 cd05104 PTKc_Kit Catalytic dom 43.2 17 0.00036 32.5 2.1 42 232-273 85-127 (375)
236 cd05631 STKc_GRK4 Catalytic do 42.8 13 0.00027 31.6 1.2 41 233-273 48-88 (285)
237 cd05078 PTK_Jak2_Jak3_rpt1 Pse 42.6 30 0.00065 28.7 3.5 42 232-273 46-87 (258)
238 cd08228 STKc_Nek6 Catalytic do 42.4 20 0.00044 29.7 2.4 44 230-273 47-90 (267)
239 cd06624 STKc_ASK Catalytic dom 42.2 46 0.00099 27.7 4.5 43 231-273 51-93 (268)
240 KOG0198 MEKK and related serin 41.9 19 0.00041 31.6 2.1 62 210-274 42-105 (313)
241 cd05036 PTKc_ALK_LTK Catalytic 41.6 38 0.00082 28.4 4.0 43 231-273 55-97 (277)
242 cd05103 PTKc_VEGFR2 Catalytic 41.5 59 0.0013 28.5 5.3 42 232-273 57-100 (343)
243 cd05053 PTKc_FGFR Catalytic do 41.3 35 0.00076 28.8 3.8 42 232-273 62-104 (293)
244 KOG1989 ARK protein kinase fam 41.2 28 0.0006 34.2 3.2 49 225-273 74-130 (738)
245 cd08216 PK_STRAD Pseudokinase 40.9 44 0.00095 28.6 4.3 44 230-273 44-87 (314)
246 cd05072 PTKc_Lyn Catalytic dom 40.1 44 0.00094 27.6 4.1 43 231-273 47-89 (261)
247 cd05607 STKc_GRK7 Catalytic do 39.9 26 0.00055 29.6 2.7 39 235-273 43-81 (277)
248 cd05624 STKc_MRCK_beta Catalyt 39.7 13 0.00028 32.5 0.8 41 233-273 49-89 (331)
249 cd07848 STKc_CDKL5 Catalytic d 39.7 26 0.00055 29.6 2.6 40 233-272 48-87 (287)
250 cd06640 STKc_MST4 Catalytic do 39.6 37 0.0008 28.5 3.6 44 230-273 47-90 (277)
251 cd06619 PKc_MKK5 Catalytic dom 39.5 38 0.00081 28.5 3.6 44 230-273 44-87 (279)
252 cd05048 PTKc_Ror Catalytic Dom 39.4 54 0.0012 27.4 4.6 44 230-273 53-96 (283)
253 KOG0592 3-phosphoinositide-dep 39.0 24 0.00052 33.2 2.3 39 233-273 124-162 (604)
254 KOG4591 Uncharacterized conser 38.7 24 0.00052 28.5 2.0 44 105-148 222-270 (280)
255 cd05045 PTKc_RET Catalytic dom 38.6 26 0.00056 29.6 2.5 44 231-274 49-92 (290)
256 cd05066 PTKc_EphR_A Catalytic 38.5 34 0.00073 28.5 3.2 43 231-273 51-93 (267)
257 cd06644 STKc_STK10_LOK Catalyt 38.2 57 0.0012 27.5 4.6 44 230-273 54-97 (292)
258 cd05062 PTKc_IGF-1R Catalytic 37.9 42 0.0009 28.1 3.7 43 231-273 55-97 (277)
259 cd05068 PTKc_Frk_like Catalyti 37.7 38 0.00082 28.0 3.3 42 232-273 48-89 (261)
260 cd05609 STKc_MAST Catalytic do 37.5 19 0.0004 30.9 1.5 41 233-273 49-89 (305)
261 PRK13184 pknD serine/threonine 37.3 25 0.00055 35.6 2.4 64 210-273 27-90 (932)
262 cd05630 STKc_GRK6 Catalytic do 37.3 22 0.00048 30.1 1.9 40 234-273 49-88 (285)
263 KOG0661 MAPK related serine/th 37.3 36 0.00077 31.5 3.1 61 207-269 32-94 (538)
264 cd05584 STKc_p70S6K Catalytic 37.0 33 0.00071 29.7 2.9 41 233-273 48-88 (323)
265 cd08225 STKc_Nek5 Catalytic do 36.9 55 0.0012 26.8 4.2 42 232-273 46-87 (257)
266 cd05582 STKc_RSK_N N-terminal 36.8 25 0.00053 30.4 2.1 40 234-273 47-86 (318)
267 KOG1709 Guanidinoacetate methy 36.7 35 0.00077 28.2 2.7 32 66-97 9-40 (271)
268 cd05088 PTKc_Tie2 Catalytic do 35.8 49 0.0011 28.3 3.8 41 233-273 55-96 (303)
269 cd06611 STKc_SLK_like Catalyti 35.7 36 0.00078 28.5 2.9 44 230-273 47-90 (280)
270 cd05097 PTKc_DDR_like Catalyti 35.4 42 0.0009 28.5 3.3 43 231-273 63-105 (295)
271 cd05034 PTKc_Src_like Catalyti 35.3 54 0.0012 27.0 3.9 43 231-273 47-89 (261)
272 KOG1025 Epidermal growth facto 35.2 8.7 0.00019 38.0 -1.1 58 213-273 728-785 (1177)
273 cd05082 PTKc_Csk Catalytic dom 35.1 48 0.001 27.3 3.5 68 201-273 20-88 (256)
274 cd05090 PTKc_Ror1 Catalytic do 35.0 42 0.0009 28.2 3.2 43 231-273 53-95 (283)
275 cd05061 PTKc_InsR Catalytic do 34.8 44 0.00095 28.2 3.3 42 232-273 56-97 (288)
276 KOG0583 Serine/threonine prote 34.8 19 0.0004 32.4 1.0 41 234-274 68-109 (370)
277 cd05617 STKc_aPKC_zeta Catalyt 34.7 18 0.00039 31.5 0.9 41 233-273 43-84 (327)
278 cd05590 STKc_nPKC_eta Catalyti 34.5 19 0.00042 31.2 1.1 32 242-273 53-84 (320)
279 cd05106 PTKc_CSF-1R Catalytic 34.4 34 0.00073 30.6 2.6 40 234-273 90-130 (374)
280 cd05050 PTKc_Musk Catalytic do 34.2 47 0.001 28.0 3.4 44 230-273 53-96 (288)
281 cd00192 PTKc Catalytic domain 34.0 65 0.0014 26.3 4.2 43 231-273 42-84 (262)
282 cd05055 PTKc_PDGFR Catalytic d 33.4 54 0.0012 28.0 3.7 43 231-273 84-127 (302)
283 cd05581 STKc_PDK1 Catalytic do 33.4 89 0.0019 25.9 5.0 40 234-273 50-90 (280)
284 cd05623 STKc_MRCK_alpha Cataly 33.1 16 0.00035 31.8 0.4 41 233-273 49-89 (332)
285 cd05095 PTKc_DDR2 Catalytic do 33.0 50 0.0011 28.0 3.4 43 231-273 65-107 (296)
286 cd05574 STKc_phototropin_like 33.0 39 0.00085 29.0 2.8 43 231-273 47-89 (316)
287 cd08529 STKc_FA2-like Catalyti 32.9 57 0.0012 26.7 3.7 43 231-273 45-87 (256)
288 KOG4591 Uncharacterized conser 32.8 36 0.00077 27.6 2.1 42 135-176 219-268 (280)
289 cd05591 STKc_nPKC_epsilon Cata 32.3 26 0.00056 30.4 1.5 32 242-273 53-84 (321)
290 cd06658 STKc_PAK5 Catalytic do 31.8 1.2E+02 0.0027 25.6 5.7 42 232-273 66-107 (292)
291 KOG0032 Ca2+/calmodulin-depend 31.5 21 0.00045 32.3 0.7 65 210-274 60-125 (382)
292 cd05094 PTKc_TrkC Catalytic do 31.4 54 0.0012 27.7 3.3 43 231-273 53-95 (291)
293 cd05056 PTKc_FAK Catalytic dom 31.3 83 0.0018 26.1 4.4 43 230-273 52-94 (270)
294 cd05032 PTKc_InsR_like Catalyt 31.1 63 0.0014 26.9 3.7 42 232-273 56-97 (277)
295 cd08226 PK_STRAD_beta Pseudoki 31.0 63 0.0014 28.0 3.7 71 202-273 15-87 (328)
296 cd05577 STKc_GRK Catalytic dom 30.6 29 0.00064 29.1 1.5 40 234-273 42-81 (277)
297 cd05570 STKc_PKC Catalytic dom 30.5 27 0.00058 30.2 1.3 31 243-273 54-84 (318)
298 cd05101 PTKc_FGFR2 Catalytic d 30.4 60 0.0013 27.7 3.5 42 232-273 67-109 (304)
299 cd06626 STKc_MEKK4 Catalytic d 30.3 82 0.0018 25.8 4.2 45 230-274 44-88 (264)
300 cd05604 STKc_SGK3 Catalytic do 30.3 28 0.0006 30.2 1.3 35 239-273 50-84 (325)
301 cd05047 PTKc_Tie Catalytic dom 30.2 49 0.0011 27.6 2.8 42 232-273 42-84 (270)
302 KOG0659 Cdk activating kinase 30.1 79 0.0017 27.2 3.8 35 234-268 50-84 (318)
303 cd05093 PTKc_TrkB Catalytic do 30.0 60 0.0013 27.4 3.4 44 230-273 52-95 (288)
304 cd05059 PTKc_Tec_like Catalyti 29.8 66 0.0014 26.5 3.5 42 232-273 46-87 (256)
305 cd05077 PTK_Jak1_rpt1 Pseudoki 29.8 41 0.00089 28.0 2.3 39 234-272 53-91 (262)
306 cd05046 PTK_CCK4 Pseudokinase 29.7 49 0.0011 27.6 2.7 44 230-273 53-96 (275)
307 cd06623 PKc_MAPKK_plant_like C 29.5 60 0.0013 26.6 3.3 44 230-273 44-87 (264)
308 cd06646 STKc_MAP4K5 Catalytic 29.4 63 0.0014 26.7 3.4 41 233-273 54-94 (267)
309 cd05037 PTK_Jak_rpt1 Pseudokin 29.3 50 0.0011 27.1 2.7 42 231-273 47-88 (259)
310 cd06605 PKc_MAPKK Catalytic do 28.9 1.2E+02 0.0025 25.0 4.9 69 203-273 17-87 (265)
311 smart00220 S_TKc Serine/Threon 28.8 1.3E+02 0.0028 23.9 5.1 43 231-273 33-75 (244)
312 cd08222 STKc_Nek11 Catalytic d 28.5 1.3E+02 0.0027 24.7 5.1 39 235-273 52-90 (260)
313 KOG3653 Transforming growth fa 28.4 30 0.00064 32.0 1.2 70 201-274 224-297 (534)
314 cd05044 PTKc_c-ros Catalytic d 28.2 63 0.0014 26.7 3.2 43 231-273 45-87 (269)
315 cd06631 STKc_YSK4 Catalytic do 28.0 64 0.0014 26.7 3.1 42 232-273 49-90 (265)
316 cd05063 PTKc_EphR_A2 Catalytic 27.6 59 0.0013 26.9 2.9 42 232-273 53-94 (268)
317 cd06630 STKc_MEKK1 Catalytic d 27.3 87 0.0019 25.8 3.9 43 231-273 49-91 (268)
318 KOG0580 Serine/threonine prote 27.2 12 0.00026 31.4 -1.4 40 234-273 71-110 (281)
319 cd05049 PTKc_Trk Catalytic dom 26.9 80 0.0017 26.3 3.6 44 230-273 53-96 (280)
320 cd08219 STKc_Nek3 Catalytic do 26.6 58 0.0013 26.7 2.6 43 231-273 44-86 (255)
321 cd06643 STKc_SLK Catalytic dom 26.4 1E+02 0.0022 25.8 4.2 44 230-273 47-90 (282)
322 cd05112 PTKc_Itk Catalytic dom 26.4 68 0.0015 26.3 3.0 42 232-273 46-87 (256)
323 cd05100 PTKc_FGFR3 Catalytic d 26.4 74 0.0016 27.6 3.4 42 232-273 64-106 (334)
324 cd06659 STKc_PAK6 Catalytic do 26.3 95 0.0021 26.4 4.0 41 233-273 66-106 (297)
325 cd05632 STKc_GRK5 Catalytic do 26.2 40 0.00087 28.5 1.6 41 233-273 48-88 (285)
326 KOG0577 Serine/threonine prote 26.2 26 0.00057 33.5 0.4 71 200-270 39-111 (948)
327 cd06632 STKc_MEKK1_plant Catal 26.0 88 0.0019 25.5 3.6 43 231-273 48-90 (258)
328 KOG4335 FERM domain-containing 26.0 65 0.0014 30.0 2.8 52 94-145 166-218 (558)
329 cd06613 STKc_MAP4K3_like Catal 25.9 63 0.0014 26.5 2.7 44 230-273 45-88 (262)
330 KOG0513 Ca2+-independent phosp 25.8 4.7 0.0001 37.6 -4.4 49 103-151 134-182 (503)
331 cd06609 STKc_MST3_like Catalyt 25.6 75 0.0016 26.4 3.2 42 232-273 46-87 (274)
332 cd06629 STKc_MAPKKK_Bck1_like 25.4 78 0.0017 26.3 3.2 41 233-273 56-96 (272)
333 KOG3836 HLH transcription fact 24.9 17 0.00036 34.4 -1.0 53 112-164 403-455 (605)
334 cd05576 STKc_RPK118_like Catal 24.8 86 0.0019 25.6 3.3 35 239-273 39-73 (237)
335 cd05099 PTKc_FGFR4 Catalytic d 24.7 75 0.0016 27.2 3.1 41 233-273 65-106 (314)
336 cd05611 STKc_Rim15_like Cataly 24.6 74 0.0016 26.2 2.9 34 240-273 52-85 (260)
337 cd05041 PTKc_Fes_like Catalyti 24.5 98 0.0021 25.2 3.7 44 230-273 37-80 (251)
338 cd07860 STKc_CDK2_3 Catalytic 24.4 1.4E+02 0.0031 24.8 4.7 38 231-268 45-82 (284)
339 cd05603 STKc_SGK2 Catalytic do 24.3 47 0.001 28.7 1.7 35 239-273 50-84 (321)
340 cd05098 PTKc_FGFR1 Catalytic d 23.7 64 0.0014 27.6 2.4 39 235-273 73-112 (307)
341 cd05589 STKc_PKN Catalytic dom 23.6 44 0.00096 28.9 1.4 34 240-273 57-90 (324)
342 cd05092 PTKc_TrkA Catalytic do 23.5 93 0.002 26.0 3.4 43 231-273 53-95 (280)
343 COG1732 OpuBC Periplasmic glyc 23.1 65 0.0014 27.9 2.2 36 85-120 49-86 (300)
344 KOG0033 Ca2+/calmodulin-depend 23.0 90 0.0019 26.6 2.9 41 233-273 58-98 (355)
345 cd05073 PTKc_Hck Catalytic dom 23.0 1.5E+02 0.0032 24.4 4.5 42 231-273 47-88 (260)
346 cd05083 PTKc_Chk Catalytic dom 22.8 87 0.0019 25.7 3.0 41 232-273 46-86 (254)
347 cd05115 PTKc_Zap-70 Catalytic 22.6 1.3E+02 0.0028 24.8 4.1 42 231-273 41-82 (257)
348 cd05619 STKc_nPKC_theta Cataly 22.6 43 0.00092 29.0 1.1 32 242-273 53-84 (316)
349 cd06917 STKc_NAK1_like Catalyt 22.5 1.1E+02 0.0024 25.3 3.7 40 234-273 48-90 (277)
350 smart00219 TyrKc Tyrosine kina 22.3 1.5E+02 0.0031 24.1 4.3 43 231-273 47-89 (258)
351 cd05089 PTKc_Tie1 Catalytic do 22.3 86 0.0019 26.6 2.9 42 232-273 49-91 (297)
352 cd06645 STKc_MAP4K3 Catalytic 22.1 1.1E+02 0.0023 25.3 3.4 40 234-273 55-94 (267)
353 cd05038 PTKc_Jak_rpt2 Catalyti 22.1 1.1E+02 0.0024 25.3 3.6 45 229-273 50-96 (284)
354 cd06647 STKc_PAK_I Catalytic d 21.9 1.1E+02 0.0025 25.8 3.6 41 233-273 64-104 (293)
355 cd05620 STKc_nPKC_delta Cataly 21.6 42 0.00091 29.0 0.9 32 242-273 53-84 (316)
356 cd05592 STKc_nPKC_theta_delta 21.6 54 0.0012 28.3 1.5 33 241-273 52-84 (316)
357 cd06606 STKc_MAPKKK Catalytic 21.4 1.1E+02 0.0023 24.8 3.3 45 229-273 43-89 (260)
358 cd08218 STKc_Nek1 Catalytic do 21.2 1.1E+02 0.0023 25.1 3.3 43 231-273 45-87 (256)
359 KOG0616 cAMP-dependent protein 21.2 67 0.0015 28.0 1.9 40 234-273 93-132 (355)
360 KOG0604 MAP kinase-activated p 21.1 65 0.0014 28.2 1.8 57 210-273 87-147 (400)
361 cd05051 PTKc_DDR Catalytic dom 21.0 1.1E+02 0.0024 25.7 3.3 43 231-273 65-107 (296)
362 cd06612 STKc_MST1_2 Catalytic 20.8 97 0.0021 25.3 2.9 44 230-273 43-86 (256)
363 cd06654 STKc_PAK1 Catalytic do 20.8 71 0.0015 27.1 2.1 42 232-273 64-105 (296)
364 cd06635 STKc_TAO1 Catalytic do 20.6 1.3E+02 0.0029 25.8 3.8 37 232-268 72-108 (317)
365 cd05116 PTKc_Syk Catalytic dom 20.3 1.3E+02 0.0029 24.6 3.6 45 228-273 39-83 (257)
366 cd05575 STKc_SGK Catalytic dom 20.2 63 0.0014 27.9 1.7 34 240-273 51-84 (323)
367 cd06621 PKc_MAPKK_Pek1_like Ca 20.2 1.2E+02 0.0026 25.5 3.4 44 230-273 44-89 (287)
368 cd06656 STKc_PAK3 Catalytic do 20.2 82 0.0018 26.8 2.4 42 232-273 63-104 (297)
369 cd05602 STKc_SGK1 Catalytic do 20.1 66 0.0014 27.8 1.8 35 239-273 50-84 (325)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.6e-37 Score=232.36 Aligned_cols=163 Identities=25% Similarity=0.230 Sum_probs=146.2
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLL-NEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAAD 144 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~~~~g~t~L~~ 144 (294)
..|.+|+|||||||..|+.++|.+|+ +.+..+|.+|..||||||+||..|+.++|+.|+.+ |+|+|..++.|+|||||
T Consensus 33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHy 112 (226)
T KOG4412|consen 33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHY 112 (226)
T ss_pred cccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehh
Confidence 34558999999999999999999999 55788999999999999999999999999999999 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 145 AKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 145 A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
|+..|..+++++|++.|+.++. +|..|.||||.|+.-|+++++++|+..++.
T Consensus 113 AagK~r~eIaqlLle~ga~i~~----------------------------kD~~~qtplHRAAavGklkvie~Li~~~a~ 164 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGALIRI----------------------------KDKQGQTPLHRAAAVGKLKVIEYLISQGAP 164 (226)
T ss_pred hhcCChhhHHHHHHhcCCCCcc----------------------------cccccCchhHHHHhccchhhHHHHHhcCCC
Confidence 9999999999999999987744 367788888888888888888888888888
Q ss_pred ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
.+..+..|+||||.|...+|+++..+|...+++
T Consensus 165 ~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd 197 (226)
T KOG4412|consen 165 LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGAD 197 (226)
T ss_pred CCcccccCccHHHHHHhccCchHHHHHHHhccc
Confidence 888888888888888778888888888888876
No 2
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=254.28 Aligned_cols=188 Identities=18% Similarity=0.148 Sum_probs=163.6
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
..|.+|.||||+|+..|+.+++++|+++|++++..+ |+||||+|+..|+.++|++|+++|++++..|..|+||||+|+
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 467889999999999999999999999999988764 789999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---C-CCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhh
Q 022605 147 YYGNVEVYNILKARGAKVPKT---K-RTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILD 219 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~---~-~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll 219 (294)
..|+.+++++|+++|++++.. | .||||+|+.. +++++|+..+.... ....|.||||+|+.+|+.+++++|+
T Consensus 103 ~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d~~~g~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 103 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--ccccCccHHHHHHHcCCHHHHHHHH
Confidence 999999999999999998654 5 4899999765 55677776542111 1124789999999999999999999
Q ss_pred ccCCCChHhhhhhhhH-HHHHHHcCCCchhhhhhhhcCCC
Q 022605 220 KESHKDPERINAFTHE-LTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 220 ~~~~~~~~~~~~~~t~-l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
+.|++....+..|.|| ||+|+..|+.++|++|...+++.
T Consensus 181 ~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~i 220 (284)
T PHA02791 181 DYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINI 220 (284)
T ss_pred HCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9998777766777766 99999999999999999999885
No 3
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=270.35 Aligned_cols=236 Identities=15% Similarity=0.078 Sum_probs=195.1
Q ss_pred CCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCC
Q 022605 51 SLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG--HVEVVKLLLSKK 128 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g--~~~~v~~Ll~~g 128 (294)
..+.++.++..+...+..+.+|.||||+||..|+.++|++|+++|+++|.+|..|.||||+|+..+ ..+++++|+++|
T Consensus 51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G 130 (446)
T PHA02946 51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYG 130 (446)
T ss_pred CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 445678888888888899999999999999999999999999999999999999999999998866 489999999999
Q ss_pred CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC-----CCcccccCcchhhhhcccCCC
Q 022605 129 ANIDA-RDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR-----EVPEYELNPLELQVRKADGIT 199 (294)
Q Consensus 129 ad~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~-----~~~~~l~~~~~~~~~~~~~~~ 199 (294)
++++. .|..|.|||| |+..++.+++++|++.|++++.. |+||||+|+.. +.+++|+..+ .+++..+..|
T Consensus 131 adin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~G-adin~~d~~G 208 (446)
T PHA02946 131 AKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLG-ISPSKPDHDG 208 (446)
T ss_pred CCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcC-CCCcccCCCC
Confidence 99995 6899999997 67779999999999999998644 99999998442 3567777654 7788888999
Q ss_pred CCceeeeeecC--chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCC-chhhhhhhhcCCCC---eEEEE--------e
Q 022605 200 KGSYQVAKWNG--TKVWVKILDKESHKDPERINAFTHELTIVEKARHP-NVVQFVGAVTQNIP---MMIVL--------E 265 (294)
Q Consensus 200 ~t~l~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~-~iv~~L~~~~~~~~---l~~~~--------e 265 (294)
.||||+|+..| +.+++++|+. ++.....+..|.||||+|++.++. +++++|...+.... +.+.. |
T Consensus 209 ~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e 287 (446)
T PHA02946 209 NTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLE 287 (446)
T ss_pred CCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHH
Confidence 99999999886 7899999984 667777778999999999999885 89999988764321 00000 0
Q ss_pred -cCCCC-CCCcccccccccccccccC
Q 022605 266 -YHAKV-SMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 266 -~~~~g-~l~~t~l~~a~~n~~~~~~ 289 (294)
...+| ..+.||||+|+.++++.++
T Consensus 288 ~l~~~g~~~~~TpLh~Aa~~g~~eiv 313 (446)
T PHA02946 288 IINDKGKQYDSTDFKMAVEVGSIRCV 313 (446)
T ss_pred HHHHcCcccCCCHHHHHHHcCCHHHH
Confidence 11223 4578999999999987654
No 4
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=273.99 Aligned_cols=245 Identities=15% Similarity=0.110 Sum_probs=217.9
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHH-----HHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLF-----MACRGDVKGVEDLLNEGSDVNSIDLDGRTALH 110 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~-----Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh 110 (294)
+.....+++.++..++.+.++.++..+......+..+.||||+ |+..|+.+++++|+++|++++..|..|.||||
T Consensus 32 ~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~ 111 (480)
T PHA03100 32 YKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLL 111 (480)
T ss_pred hcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhh
Confidence 3355677788888999999999999998888888999999999 99999999999999999999999999999999
Q ss_pred HHH--HcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCC---CCCCccccCCC---CC
Q 022605 111 IAA--CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG--NVEVYNILKARGAKVPKT---KRTPMTVANPR---EV 180 (294)
Q Consensus 111 ~A~--~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~ 180 (294)
+|+ ..|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++.. |.||||+|+.. ++
T Consensus 112 ~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~i 191 (480)
T PHA03100 112 YAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDV 191 (480)
T ss_pred HHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHH
Confidence 999 999999999999999999999999999999999999 999999999999998644 89999999765 55
Q ss_pred cccccCcchhhhhcccCCC------CCceeeeeecCc--hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhh
Q 022605 181 PEYELNPLELQVRKADGIT------KGSYQVAKWNGT--KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252 (294)
Q Consensus 181 ~~~l~~~~~~~~~~~~~~~------~t~l~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~ 252 (294)
+++|+..+ .++...+..+ .||||.|+..|+ .+++++|++.|.+....+..|.||+|+|+..++.+++++|.
T Consensus 192 v~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll 270 (480)
T PHA03100 192 IKFLLDNG-ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLL 270 (480)
T ss_pred HHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 67777655 4555556666 899999999999 99999999998887777888999999999999999999999
Q ss_pred hhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 253 AVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 253 ~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
..++++ ...+..|.|||++|+.+++..++
T Consensus 271 ~~gad~--------n~~d~~g~tpl~~A~~~~~~~iv 299 (480)
T PHA03100 271 DLGANP--------NLVNKYGDTPLHIAILNNNKEIF 299 (480)
T ss_pred HcCCCC--------CccCCCCCcHHHHHHHhCCHHHH
Confidence 999864 44677889999999999876543
No 5
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1e-34 Score=264.71 Aligned_cols=239 Identities=15% Similarity=0.049 Sum_probs=201.9
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCC------------------
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGS------------------ 96 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~------------------ 96 (294)
......++++.++..++.+.++.++..+......+..|.||||.|+..|+.+++++|+++|+
T Consensus 31 ~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~l 110 (434)
T PHA02874 31 SVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTI 110 (434)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHH
Confidence 34456677888888999999999998888888888889999999999999999999987764
Q ss_pred -----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---C
Q 022605 97 -----DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---K 168 (294)
Q Consensus 97 -----~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~ 168 (294)
+++.++..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. |
T Consensus 111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g 190 (434)
T PHA02874 111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190 (434)
T ss_pred HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 46677889999999999999999999999999999999999999999999999999999999999987543 8
Q ss_pred CCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC-C
Q 022605 169 RTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR-H 244 (294)
Q Consensus 169 ~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~ 244 (294)
.||||+|+.. +++++|+..+ .++...+..|.||||.|+..+. +++++|+ .+......+..|.||+|+|+..+ +
T Consensus 191 ~tpL~~A~~~g~~~iv~~Ll~~g-~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~ 267 (434)
T PHA02874 191 ESPLHNAAEYGDYACIKLLIDHG-NHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCD 267 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCc
Confidence 9999999765 5667777665 4566677789999999998765 5667776 45566667778999999999875 7
Q ss_pred CchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 245 PNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 245 ~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
.+++++|...+++. ...+..|.|||++|+.++
T Consensus 268 ~~iv~~Ll~~gad~--------n~~d~~g~TpL~~A~~~~ 299 (434)
T PHA02874 268 IDIIDILLYHKADI--------SIKDNKGENPIDTAFKYI 299 (434)
T ss_pred HHHHHHHHHCcCCC--------CCCCCCCCCHHHHHHHhC
Confidence 89999999988874 446777899999998876
No 6
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=8.8e-35 Score=268.06 Aligned_cols=245 Identities=19% Similarity=0.108 Sum_probs=200.9
Q ss_pred CCCCCCccccccCCC---CCccccCCCCCCCCCCCCCCCchhHHHHHHHcC-CHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 022605 36 DPRRNNMRFSFGRQS---SLDPIRRSPVQDELTVPENLDSTMQLLFMACRG-DVKGVEDLLNEGSDVNSIDLDGRTALHI 111 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g-~~~~v~~Ll~~g~~~~~~~~~g~TpLh~ 111 (294)
+..+.++++.+...+ ..+.++.++..+...+..+..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+
T Consensus 44 ~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~ 123 (471)
T PHA03095 44 GEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV 123 (471)
T ss_pred CCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 444566666666665 667777888888888888888999999999988 5889999999999999888889999999
Q ss_pred HH--HcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCC---CCCCCccccCCC-----C
Q 022605 112 AA--CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG--NVEVYNILKARGAKVPK---TKRTPMTVANPR-----E 179 (294)
Q Consensus 112 A~--~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~---~~~t~l~~a~~~-----~ 179 (294)
|+ ..++.+++++|+++|++++..|..|.||||+|+..+ +.+++++|+++|++++. .|+||||+++.. +
T Consensus 124 a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~ 203 (471)
T PHA03095 124 YLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRAR 203 (471)
T ss_pred HhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHH
Confidence 98 556788999999999999998999999999888766 57889999999888743 488999887532 3
Q ss_pred CcccccCcchhhhhcccCCCCCceeeeeecCch--hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 180 VPEYELNPLELQVRKADGITKGSYQVAKWNGTK--VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 180 ~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~--~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
+++.++..+ .+++..+..|.||||+|+..|+. .+++.|+..+.+....+..|.||||+|+..|+.+++++|...+++
T Consensus 204 i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad 282 (471)
T PHA03095 204 IVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGAD 282 (471)
T ss_pred HHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455666544 67778888999999999999874 578888888888877788999999999999999999999999987
Q ss_pred CCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 258 IPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 258 ~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
+ ...+..|.||||+|+.+++..++
T Consensus 283 ~--------n~~~~~g~tpl~~A~~~~~~~~v 306 (471)
T PHA03095 283 I--------NAVSSDGNTPLSLMVRNNNGRAV 306 (471)
T ss_pred C--------cccCCCCCCHHHHHHHhCCHHHH
Confidence 5 34567788999999999886543
No 7
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=263.06 Aligned_cols=219 Identities=11% Similarity=0.104 Sum_probs=183.9
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcC--CHHHHHHHHhcCCCCCC-CCCCCCcHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRG--DVKGVEDLLNEGSDVNS-IDLDGRTALH 110 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g--~~~~v~~Ll~~g~~~~~-~~~~g~TpLh 110 (294)
..+..+.++++.++..++.+.++.++..+......|..|.||||+|+..+ ..+++++|+++|+++|. .|..|.||||
T Consensus 67 ~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~ 146 (446)
T PHA02946 67 ETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL 146 (446)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence 44556778888888899999999999999888889999999999999876 48999999999999995 6889999997
Q ss_pred HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCC---CCCCCccccCCC-----CC
Q 022605 111 IAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG--NVEVYNILKARGAKVPK---TKRTPMTVANPR-----EV 180 (294)
Q Consensus 111 ~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~---~~~t~l~~a~~~-----~~ 180 (294)
||..|+.+++++|+++|++++..|..|+||||+|+..+ +.+++++|++.|++++. .|+||||+|+.. ++
T Consensus 147 -aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~i 225 (446)
T PHA02946 147 -ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDI 225 (446)
T ss_pred -HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHH
Confidence 66779999999999999999999999999999998765 46899999999999865 499999999764 24
Q ss_pred cccccCcchhhhhcccCCCCCceeeeeecCc-hhhhHhhhccCCCChH-----------------hh----hhhhhHHHH
Q 022605 181 PEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPE-----------------RI----NAFTHELTI 238 (294)
Q Consensus 181 ~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~-~~~v~~Ll~~~~~~~~-----------------~~----~~~~t~l~~ 238 (294)
+++|+. ..+++..+..|.||||+|+..++ .+++++|++.++.... .. ..+.||||+
T Consensus 226 v~lLl~--gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~ 303 (446)
T PHA02946 226 INLLLP--STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKM 303 (446)
T ss_pred HHHHHc--CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHH
Confidence 556664 47788889999999999999988 4889999877653200 01 235699999
Q ss_pred HHHcCCCchhhhhhhhc
Q 022605 239 VEKARHPNVVQFVGAVT 255 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~ 255 (294)
|++.|+.++|++|+..+
T Consensus 304 Aa~~g~~eivk~Ll~~~ 320 (446)
T PHA02946 304 AVEVGSIRCVKYLLDND 320 (446)
T ss_pred HHHcCCHHHHHHHHHCC
Confidence 99999999999998754
No 8
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=262.27 Aligned_cols=231 Identities=16% Similarity=0.101 Sum_probs=195.5
Q ss_pred cccccCCCCCccccCCCCCCCC-CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 022605 43 RFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVV 121 (294)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v 121 (294)
+..++.+|+.+.++.++..... ....+.+|.||||.|+..|+.++|++|+++|+++|..+..|.||||.|+..|+.+++
T Consensus 5 l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv 84 (434)
T PHA02874 5 LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDII 84 (434)
T ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 4456678888888888765443 456677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCC-----------------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCcccc
Q 022605 122 KLLLSKKA-----------------------NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVA 175 (294)
Q Consensus 122 ~~Ll~~ga-----------------------d~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a 175 (294)
++|+++|+ +++.++..|.||||+|+..|+.+++++|++.|++++.. |.||||+|
T Consensus 85 ~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A 164 (434)
T PHA02874 85 KLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIA 164 (434)
T ss_pred HHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 99988765 46778889999999999999999999999999998644 99999999
Q ss_pred CCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhh
Q 022605 176 NPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252 (294)
Q Consensus 176 ~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~ 252 (294)
+.. +++++|+..+ .+++..+..|.||||.|+..|+.+++++|++.+.........|.||+|.|+..++ +++.+|.
T Consensus 165 ~~~~~~~iv~~Ll~~g-~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll 242 (434)
T PHA02874 165 IKHNFFDIIKLLLEKG-AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI 242 (434)
T ss_pred HHCCcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH
Confidence 765 5667777655 5556677889999999999999999999999998877777889999999999876 5666665
Q ss_pred hhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 253 AVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 253 ~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
.+.+ ....+..|.||||+|+..+
T Consensus 243 -~~~~--------in~~d~~G~TpLh~A~~~~ 265 (434)
T PHA02874 243 -NNAS--------INDQDIDGSTPLHHAINPP 265 (434)
T ss_pred -cCCC--------CCCcCCCCCCHHHHHHhcC
Confidence 3333 3456778999999999765
No 9
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=2.1e-34 Score=256.88 Aligned_cols=202 Identities=21% Similarity=0.223 Sum_probs=172.5
Q ss_pred CccccccCCCCCccccCCCCC-CCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEGHV 118 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g~~ 118 (294)
...+.++..|.++.++.+.+. +......|.+|.|+|||||.+++++++++||++|+++|..+ .-|.||||||+++|++
T Consensus 46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~ 125 (600)
T KOG0509|consen 46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHI 125 (600)
T ss_pred hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcH
Confidence 445777788999999999988 88888899999999999999999999999999999999998 6699999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCC---cccccCcchhhh
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREV---PEYELNPLELQV 192 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~---~~~l~~~~~~~~ 192 (294)
.+|.+|+++|||++.+|.+|.+|||+|++.|+.-.|-||+.+|+++|.. |+|||+||+.+.. +..|+..+....
T Consensus 126 ~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~ 205 (600)
T KOG0509|consen 126 SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL 205 (600)
T ss_pred HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc
Confidence 9999999999999999999999999999999999999999999998655 9999999987643 445554443333
Q ss_pred hcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHc
Q 022605 193 RKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKA 242 (294)
Q Consensus 193 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 242 (294)
-..+..|.||||+|+..|+..++++|++.+......+.+|.||+++|.++
T Consensus 206 ~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 206 LTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 34448889999999999999999955544444445556789999999877
No 10
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=3e-34 Score=269.66 Aligned_cols=240 Identities=10% Similarity=0.064 Sum_probs=188.1
Q ss_pred CCCCccccccC--CCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCcHHHHH-
Q 022605 38 RRNNMRFSFGR--QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGD--VKGVEDLLNEGSDVNSIDLDGRTALHIA- 112 (294)
Q Consensus 38 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~--~~~v~~Ll~~g~~~~~~~~~g~TpLh~A- 112 (294)
.+.++++.+.. .++.+.++.++..+...+..|..|.||||+|+..|+ .++|++|+++|+|+|.+|..|+||||+|
T Consensus 176 ~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai 255 (764)
T PHA02716 176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYI 255 (764)
T ss_pred CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 34445544322 234577888888888888889999999999999985 4899999999999999999999999965
Q ss_pred ------------------------------------HHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH--cCCHHHH
Q 022605 113 ------------------------------------ACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY--YGNVEVY 154 (294)
Q Consensus 113 ------------------------------------~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~--~g~~~~v 154 (294)
+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++
T Consensus 256 ~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIV 335 (764)
T PHA02716 256 INIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDII 335 (764)
T ss_pred HhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHH
Confidence 34578899999999999999999999999998764 4578999
Q ss_pred HHHHHCCCCCCCC---CCCCccccCC-----------------CCCcccccCcchhhhhcccCCCCCceee----eeecC
Q 022605 155 NILKARGAKVPKT---KRTPMTVANP-----------------REVPEYELNPLELQVRKADGITKGSYQV----AKWNG 210 (294)
Q Consensus 155 ~~Ll~~ga~~~~~---~~t~l~~a~~-----------------~~~~~~l~~~~~~~~~~~~~~~~t~l~~----A~~~g 210 (294)
++|+++|++++.. |+||||+|+. .+++++|+..+ .+++..+..|.||||. |...+
T Consensus 336 klLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~n~~ 414 (764)
T PHA02716 336 KLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYICTAQNYM 414 (764)
T ss_pred HHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHHhcC
Confidence 9999999998654 8999998632 25677777765 7788888899999983 33456
Q ss_pred chhhhHhhhccCCCC-------------------------------------------------------------hHhh
Q 022605 211 TKVWVKILDKESHKD-------------------------------------------------------------PERI 229 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~-------------------------------------------------------------~~~~ 229 (294)
+.+++++|++.+... ...+
T Consensus 415 ~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D 494 (764)
T PHA02716 415 YYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCE 494 (764)
T ss_pred hHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccC
Confidence 788888888754210 0012
Q ss_pred hhhhhHHHHHHHcCCCchh-----hhhhhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 230 NAFTHELTIVEKARHPNVV-----QFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv-----~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
..|+||||+|+..|+.+++ ++|...+++. ...+..|.||||+|+++++.
T Consensus 495 ~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADI--------N~~d~~G~TPLh~A~~~g~~ 548 (764)
T PHA02716 495 TSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNI--------NIPTKNGVTPLMLTMRNNRL 548 (764)
T ss_pred CCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCC--------cccCCCCCCHHHHHHHcCCc
Confidence 3578999999999887655 9999988874 45778889999999999865
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=261.27 Aligned_cols=236 Identities=17% Similarity=0.044 Sum_probs=203.8
Q ss_pred CCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVE 119 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~ 119 (294)
...++.++..|+.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++..+..+.||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~ 82 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK 82 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence 34567777888999999999888888888889999999999999999999999999999998899999999999999999
Q ss_pred HHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhh
Q 022605 120 VVKLLLSKKANID-ARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQV 192 (294)
Q Consensus 120 ~v~~Ll~~gad~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~ 192 (294)
+|++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+.. +.+++|+..+ .++
T Consensus 83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g-~~~ 161 (413)
T PHA02875 83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-ACL 161 (413)
T ss_pred HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-CCC
Confidence 9999999998775 45678999999999999999999999999998654 99999999765 5567777655 566
Q ss_pred hcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhh-hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCC
Q 022605 193 RKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAF-THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVS 271 (294)
Q Consensus 193 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~ 271 (294)
+..+..|.||||+|+..|+.+++++|++.|+........| .+|+++|+..++.+++++|...++++.... ..+.
T Consensus 162 ~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~-----~~~~ 236 (413)
T PHA02875 162 DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMF-----MIEG 236 (413)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHh-----hcCC
Confidence 7778889999999999999999999999998877666665 589999999999999999999999875421 2234
Q ss_pred CCcccccccc
Q 022605 272 MPITPFLTLS 281 (294)
Q Consensus 272 l~~t~l~~a~ 281 (294)
-+.|||+.+.
T Consensus 237 ~~~t~l~~~~ 246 (413)
T PHA02875 237 EECTILDMIC 246 (413)
T ss_pred CchHHHHHHH
Confidence 5668887654
No 12
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=264.35 Aligned_cols=235 Identities=18% Similarity=0.134 Sum_probs=203.5
Q ss_pred ccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC-cHHHH
Q 022605 46 FGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRG---DVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG-HVEVV 121 (294)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g-~~~~v 121 (294)
.....+.+.++.++..+......+..|.||||+|+..| +.+++++|+++|+++|.++..|.||||+|+..| +.+++
T Consensus 21 ~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv 100 (471)
T PHA03095 21 NASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVI 100 (471)
T ss_pred cCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHH
Confidence 35567778889999888888888999999999999998 999999999999999999999999999999999 59999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHCCCCCCC---CCCCCccccCCC-----CCcccccCcchhh
Q 022605 122 KLLLSKKANIDARDRWGSTAAADAK--YYGNVEVYNILKARGAKVPK---TKRTPMTVANPR-----EVPEYELNPLELQ 191 (294)
Q Consensus 122 ~~Ll~~gad~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~~~---~~~t~l~~a~~~-----~~~~~l~~~~~~~ 191 (294)
++|+++|++++..|..|.||||+|+ ..++.+++++|+++|++++. .|.||||+|... +++++|+..+ .+
T Consensus 101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g-~~ 179 (471)
T PHA03095 101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAG-AD 179 (471)
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcC-CC
Confidence 9999999999999999999999999 55689999999999999865 499999987442 4567777665 44
Q ss_pred hhcccCCCCCceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCC--chhhhhhhhcCCCCeEEEEecC
Q 022605 192 VRKADGITKGSYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHP--NVVQFVGAVTQNIPMMIVLEYH 267 (294)
Q Consensus 192 ~~~~~~~~~t~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~--~iv~~L~~~~~~~~l~~~~e~~ 267 (294)
+...+..|.||||.|+.. ++.++++.|++.|..+...+..|.||+|+|+..++. .++++|...+.+ ..
T Consensus 180 ~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d--------in 251 (471)
T PHA03095 180 VYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS--------IN 251 (471)
T ss_pred CcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC--------CC
Confidence 455588899999998864 788999999999998888889999999999999986 577788777765 44
Q ss_pred CCCCCCcccccccccccccccC
Q 022605 268 AKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 268 ~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
..+..|.||||+|+.+++..++
T Consensus 252 ~~d~~g~TpLh~A~~~~~~~~v 273 (471)
T PHA03095 252 ARNRYGQTPLHYAAVFNNPRAC 273 (471)
T ss_pred CcCCCCCCHHHHHHHcCCHHHH
Confidence 5668899999999998876543
No 13
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=3.5e-34 Score=269.18 Aligned_cols=207 Identities=14% Similarity=-0.005 Sum_probs=176.1
Q ss_pred CCCCCccccCCCCCC-CCCCCC-CCCchhHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc--HHHH
Q 022605 48 RQSSLDPIRRSPVQD-ELTVPE-NLDSTMQLLFMAC--RGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH--VEVV 121 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~-~~~~~~-~~~g~t~L~~Aa~--~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~--~~~v 121 (294)
+.+..+.++.+++.+ ...+.. +..|.||||+|+. +++.++|++|+++|+++|.+|..|.||||+|+..|+ .++|
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV 230 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI 230 (764)
T ss_pred cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence 356677888888888 666666 8889999999875 468999999999999999999999999999999995 5999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHH-------------------------------------HHcCCHHHHHHHHHCCCCC
Q 022605 122 KLLLSKKANIDARDRWGSTAAADA-------------------------------------KYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 122 ~~Ll~~gad~~~~~~~g~t~L~~A-------------------------------------~~~g~~~~v~~Ll~~ga~~ 164 (294)
++|+++|||+|.+|..|+||||+| +..|+.+++++|++.|+++
T Consensus 231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI 310 (764)
T PHA02716 231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL 310 (764)
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce
Confidence 999999999999999999999975 3457889999999999998
Q ss_pred CCC---CCCCccccC-----CCCCcccccCcchhhhhcccCCCCCceeeeee--------------cCchhhhHhhhccC
Q 022605 165 PKT---KRTPMTVAN-----PREVPEYELNPLELQVRKADGITKGSYQVAKW--------------NGTKVWVKILDKES 222 (294)
Q Consensus 165 ~~~---~~t~l~~a~-----~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~--------------~g~~~~v~~Ll~~~ 222 (294)
+.. |+||||+|+ ..+++++|+..+ .+++..+..|.||||+|+. .++.+++++|++.|
T Consensus 311 N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G-ADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G 389 (764)
T PHA02716 311 HYKDSAGRTCLHQYILRHNISTDIIKLLHEYG-NDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG 389 (764)
T ss_pred eccCCCCCCHHHHHHHHhCCCchHHHHHHHcC-CCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC
Confidence 644 999999863 236788888765 6788889999999998754 47899999999999
Q ss_pred CCChHhhhhhhhHHHH----HHHcCCCchhhhhhhhc
Q 022605 223 HKDPERINAFTHELTI----VEKARHPNVVQFVGAVT 255 (294)
Q Consensus 223 ~~~~~~~~~~~t~l~~----a~~~~~~~iv~~L~~~~ 255 (294)
++....+..|.||||. |...++.+++++|.+.+
T Consensus 390 ADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~ 426 (764)
T PHA02716 390 ADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK 426 (764)
T ss_pred CCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence 8888888899999994 33357789999987743
No 14
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=262.52 Aligned_cols=203 Identities=21% Similarity=0.187 Sum_probs=155.1
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH-------------------------------
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV------------------------------- 118 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~------------------------------- 118 (294)
..+.||||+||..|+.++|++|+++|+++|.+|..|.||||+||..|+.
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ 114 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV 114 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence 3455666666666666666666666666666666666666666654322
Q ss_pred ---------------------------------HHHHHHHhCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 022605 119 ---------------------------------EVVKLLLSKKANIDARDRW-GSTAAADAKYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 119 ---------------------------------~~v~~Ll~~gad~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 164 (294)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+++
T Consensus 115 ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~ 194 (477)
T PHA02878 115 EIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV 194 (477)
T ss_pred HHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC
Confidence 2677778888899988888 999999999999999999999999988
Q ss_pred CCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeec-CchhhhHhhhccCCCChHhhh-hhhhHH
Q 022605 165 PKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWN-GTKVWVKILDKESHKDPERIN-AFTHEL 236 (294)
Q Consensus 165 ~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~-g~~~~v~~Ll~~~~~~~~~~~-~~~t~l 236 (294)
+.. |.||||+|+.. +++++|+..+ .+++..+..|.||||+|+.. ++.+++++|++.|++...... .|.|||
T Consensus 195 n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpL 273 (477)
T PHA02878 195 NIPDKTNNSPLHHAVKHYNKPIVHILLENG-ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTAL 273 (477)
T ss_pred CCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHH
Confidence 644 88999998654 5667777654 66777788889999999865 688999999988877666554 688999
Q ss_pred HHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccc
Q 022605 237 TIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFH 283 (294)
Q Consensus 237 ~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n 283 (294)
|+| .++.+++++|...++++ ...+..|.||||+|+.+
T Consensus 274 h~A--~~~~~~v~~Ll~~gadi--------n~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 274 HSS--IKSERKLKLLLEYGADI--------NSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred HHH--ccCHHHHHHHHHCCCCC--------CCcCCCCCCHHHHHHHH
Confidence 999 56788999999888874 44567788999999864
No 15
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=244.25 Aligned_cols=213 Identities=15% Similarity=0.049 Sum_probs=182.4
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~ 114 (294)
.+..+.++++.++..++.+.++.++..+...... ++.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 26 ~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 26 ADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 3556778888888888888888888777655443 47899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhCCCCCCCCCCCCC-CHHHHHHHcCCHHHHHHHHHCCCCC-CC-CCCCCccccCCC---CCcccccCcc
Q 022605 115 EGHVEVVKLLLSKKANIDARDRWGS-TAAADAKYYGNVEVYNILKARGAKV-PK-TKRTPMTVANPR---EVPEYELNPL 188 (294)
Q Consensus 115 ~g~~~~v~~Ll~~gad~~~~~~~g~-t~L~~A~~~g~~~~v~~Ll~~ga~~-~~-~~~t~l~~a~~~---~~~~~l~~~~ 188 (294)
.|+.+++++|+++|++++..+..|+ ||||+|+..|+.++|++|++++++. +. .|.||||+|+.. +++++|+..+
T Consensus 104 ~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~g 183 (284)
T PHA02791 104 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYM 183 (284)
T ss_pred cCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999999999999998885 8999999999999999999998654 43 389999999776 5667788765
Q ss_pred hhhhhcccCCCCCc-eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 189 ELQVRKADGITKGS-YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 189 ~~~~~~~~~~~~t~-l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
.+++..+..|.|| ||+|+..|+.++|++|++.|+....++.+ .+++ ++.|++++|+....+
T Consensus 184 -Ad~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~-~~~l------~~~e~~~~ll~~~~~ 245 (284)
T PHA02791 184 -TSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLE-NVLL------DDAEIAKMIIEKHVE 245 (284)
T ss_pred -CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCccc-CccC------CCHHHHHHHHHhhhh
Confidence 5667777788877 99999999999999999999877666553 3444 888999999987765
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=262.82 Aligned_cols=227 Identities=19% Similarity=0.171 Sum_probs=199.9
Q ss_pred ccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHH-----HHHcCcHHHHHHHHhC
Q 022605 53 DPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHI-----AACEGHVEVVKLLLSK 127 (294)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~-----A~~~g~~~~v~~Ll~~ 127 (294)
..++.++..+......+..+.||||.|+..|+.++|++|+++|++++..+..|.||||+ |+..++.+++++|+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ 95 (480)
T PHA03100 16 KNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY 95 (480)
T ss_pred HHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHC
Confidence 34455565666667778899999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHCCCCCCC---CCCCCccccCCC-----CCcccccCcchhhhhcccC
Q 022605 128 KANIDARDRWGSTAAADAK--YYGNVEVYNILKARGAKVPK---TKRTPMTVANPR-----EVPEYELNPLELQVRKADG 197 (294)
Q Consensus 128 gad~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~~~---~~~t~l~~a~~~-----~~~~~l~~~~~~~~~~~~~ 197 (294)
|++++..|..|.||||+|+ ..|+.+++++|+++|++++. .|.||||+|+.. +++++|+..+ .+++..+.
T Consensus 96 ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~din~~d~ 174 (480)
T PHA03100 96 GANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG-VDINAKNR 174 (480)
T ss_pred CCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-CCcccccC
Confidence 9999999999999999999 99999999999999999854 499999999754 4567777665 56677777
Q ss_pred CCCCceeeeeecCchhhhHhhhccCCCChHhhhhh------hhHHHHHHHcCC--CchhhhhhhhcCCCCeEEEEecCCC
Q 022605 198 ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAF------THELTIVEKARH--PNVVQFVGAVTQNIPMMIVLEYHAK 269 (294)
Q Consensus 198 ~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~------~t~l~~a~~~~~--~~iv~~L~~~~~~~~l~~~~e~~~~ 269 (294)
.|.||||.|+..|+.+++++|++.|+........+ .||+|.|+..++ .+++++|...+.+. ...
T Consensus 175 ~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di--------n~~ 246 (480)
T PHA03100 175 YGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI--------NIK 246 (480)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC--------CCC
Confidence 89999999999999999999999998777666666 899999999999 99999999988763 345
Q ss_pred CCCCccccccccccccccc
Q 022605 270 VSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 270 g~l~~t~l~~a~~n~~~~~ 288 (294)
+..|.||||+|+.+++..+
T Consensus 247 d~~g~TpL~~A~~~~~~~i 265 (480)
T PHA03100 247 DVYGFTPLHYAVYNNNPEF 265 (480)
T ss_pred CCCCCCHHHHHHHcCCHHH
Confidence 6788999999999987654
No 17
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=255.48 Aligned_cols=209 Identities=15% Similarity=0.044 Sum_probs=185.9
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 151 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~ 151 (294)
.+++||.|+..|+.+++++|+++|+++|.++..|.||||+|+..|+.+++++|+++|++++..+..+.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~ 81 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV 81 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCC----CCCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 152 EVYNILKARGAKVP----KTKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 152 ~~v~~Ll~~ga~~~----~~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
+++++|++.|++++ ..|.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.+..
T Consensus 82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g-ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~ 160 (413)
T PHA02875 82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG-ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC 160 (413)
T ss_pred HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 99999999998763 3499999999765 5677787765 56677778899999999999999999999999988
Q ss_pred ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC-cccccccccccccccC
Q 022605 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP-ITPFLTLSFHKQTHTS 289 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~-~t~l~~a~~n~~~~~~ 289 (294)
....+..|.||+|+|+..|+.+++++|...++++.. .+..| .||+|+|+.+++..++
T Consensus 161 ~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~--------~~~~~~~t~l~~A~~~~~~~iv 218 (413)
T PHA02875 161 LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY--------FGKNGCVAALCYAIENNKIDIV 218 (413)
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCc--------CCCCCCchHHHHHHHcCCHHHH
Confidence 777788899999999999999999999999987532 23333 5899999999887643
No 18
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.98 E-value=4e-33 Score=257.98 Aligned_cols=228 Identities=14% Similarity=0.057 Sum_probs=185.2
Q ss_pred CCccccCCCCCCCCCCCCCCCchhHHHHHHHcC------CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc---CcHHHH
Q 022605 51 SLDPIRRSPVQDELTVPENLDSTMQLLFMACRG------DVKGVEDLLNEGSDVNSIDLDGRTALHIAACE---GHVEVV 121 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g------~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~---g~~~~v 121 (294)
..+.++.+++.+...+..+ .+.||||.|+.++ +.++|++|+++|+|+|.+|..|.||||.|+.. |+.+++
T Consensus 49 ~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv 127 (494)
T PHA02989 49 KIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDML 127 (494)
T ss_pred ChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHH
Confidence 4677888888887776655 5689999888754 46899999999999999999999999988765 678999
Q ss_pred HHHHhCCCCC-CCCCCCCCCHHHHHHHc--CCHHHHHHHHHCCCCCCC----CCCCCccccCC-------CCCcccccCc
Q 022605 122 KLLLSKKANI-DARDRWGSTAAADAKYY--GNVEVYNILKARGAKVPK----TKRTPMTVANP-------REVPEYELNP 187 (294)
Q Consensus 122 ~~Ll~~gad~-~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~~----~~~t~l~~a~~-------~~~~~~l~~~ 187 (294)
++|+++|+|+ +..|..|+||||+|+.. ++.+++++|+++|++++. .|.||||+|.. .+++++|+..
T Consensus 128 ~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~ 207 (494)
T PHA02989 128 RFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK 207 (494)
T ss_pred HHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC
Confidence 9999999999 78899999999998764 588999999999999865 38999998743 2567788876
Q ss_pred chhhhhcccCCCCCceeeeee------cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeE
Q 022605 188 LELQVRKADGITKGSYQVAKW------NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMM 261 (294)
Q Consensus 188 ~~~~~~~~~~~~~t~l~~A~~------~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~ 261 (294)
+ .+++..+..+.||||.++. .+..+++++|+ .+++....+..|+||||+|+..++.+++++|...++++
T Consensus 208 G-a~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi--- 282 (494)
T PHA02989 208 G-VNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI--- 282 (494)
T ss_pred C-CCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc---
Confidence 5 5666666677888876544 34567888776 45666677788999999999999999999999999874
Q ss_pred EEEecCCCCCCCcccccccccccccccC
Q 022605 262 IVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 262 ~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
...+..|.||||+|+.+++..++
T Consensus 283 -----n~~d~~G~TpL~~A~~~~~~~iv 305 (494)
T PHA02989 283 -----YNVSKDGDTVLTYAIKHGNIDML 305 (494)
T ss_pred -----cccCCCCCCHHHHHHHcCCHHHH
Confidence 44677889999999999987654
No 19
>PHA02798 ankyrin-like protein; Provisional
Probab=99.98 E-value=6.7e-33 Score=256.20 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=179.0
Q ss_pred CCCCccccCCCCCCCCCCCCCCCchhHHHHHHHc-----CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC---cHHH
Q 022605 49 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACR-----GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG---HVEV 120 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~-----g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g---~~~~ 120 (294)
..+.+.++.++..+...+..+..|.||||.|+.+ +..+++++|+++|+|+|.+|..|.||||+|+..+ +.++
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~i 127 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEI 127 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHH
Confidence 4467788999999999999999999999999864 6799999999999999999999999999999875 7899
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCC----CCCCccccCC-------CCCcccccC
Q 022605 121 VKLLLSKKANIDARDRWGSTAAADAKYYGN---VEVYNILKARGAKVPKT----KRTPMTVANP-------REVPEYELN 186 (294)
Q Consensus 121 v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~----~~t~l~~a~~-------~~~~~~l~~ 186 (294)
+++|+++|+|++..|..|.||||+|+..++ .+++++|++.|++++.. |.||||.+.. .+++++|++
T Consensus 128 v~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~ 207 (489)
T PHA02798 128 LLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD 207 (489)
T ss_pred HHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHH
Confidence 999999999999999999999999999998 99999999999998643 7899997633 245667766
Q ss_pred cchhhhhcccCCCCCcee-------eeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC
Q 022605 187 PLELQVRKADGITKGSYQ-------VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259 (294)
Q Consensus 187 ~~~~~~~~~~~~~~t~l~-------~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~ 259 (294)
.+ .+++..+..+.++++ .+...++.+++++|+. +.+.+..+..|.||||+|+..++.+++++|...++++
T Consensus 208 ~G-a~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi- 284 (489)
T PHA02798 208 NG-FIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDI- 284 (489)
T ss_pred CC-CCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcc-
Confidence 54 444444455555544 2445566667766653 4455555566777777777777777777777777653
Q ss_pred eEEEEecCCCCCCCcccccccccccccc
Q 022605 260 MMIVLEYHAKVSMPITPFLTLSFHKQTH 287 (294)
Q Consensus 260 l~~~~e~~~~g~l~~t~l~~a~~n~~~~ 287 (294)
...+..|.|||+.|+.+++..
T Consensus 285 -------n~~d~~G~TpL~~A~~~~~~~ 305 (489)
T PHA02798 285 -------NIITELGNTCLFTAFENESKF 305 (489)
T ss_pred -------cccCCCCCcHHHHHHHcCcHH
Confidence 335566777777777766543
No 20
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4e-32 Score=206.68 Aligned_cols=173 Identities=24% Similarity=0.252 Sum_probs=145.2
Q ss_pred CCCcccccc-CCCCCccccCCCCCCC-CCCCCCCCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHc
Q 022605 39 RNNMRFSFG-RQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 39 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~ 115 (294)
.+..+.+++ .-+..+.+.+++.+.. ..+.+|..|+||||+||..|+.++|+.|+.+ |+|+|+++..|.||||+|+..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK 116 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGK 116 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcC
Confidence 334444554 4566677777774443 3466789999999999999999999999998 999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcc
Q 022605 116 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKA 195 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~ 195 (294)
|..+|+++|+++|+.++.+|..|.||||-|+.-|..+++++|+..|+.+|. .
T Consensus 117 ~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~----------------------------q 168 (226)
T KOG4412|consen 117 GRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT----------------------------Q 168 (226)
T ss_pred ChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc----------------------------c
Confidence 999999999999999999999999999999999999999999999887644 4
Q ss_pred cCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHH
Q 022605 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVE 240 (294)
Q Consensus 196 ~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~ 240 (294)
|..|+||||.|.-.|+.++..+|++.+++....++++ |++..++
T Consensus 169 Dk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 169 DKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred cccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence 7778888888877788888888888887666666666 7766554
No 21
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=5.5e-32 Score=249.57 Aligned_cols=213 Identities=17% Similarity=0.109 Sum_probs=184.8
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCH---------------------------------
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDV--------------------------------- 85 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~--------------------------------- 85 (294)
...+++.++..++.+.++.++..+......+..|.||||+||..|+.
T Consensus 37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei 116 (477)
T PHA02878 37 PFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEI 116 (477)
T ss_pred CcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHH
Confidence 33467888889999999999999988888999999999999987543
Q ss_pred -------------------------------HHHHHHHhcCCCCCCCCCC-CCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q 022605 86 -------------------------------KGVEDLLNEGSDVNSIDLD-GRTALHIAACEGHVEVVKLLLSKKANIDA 133 (294)
Q Consensus 86 -------------------------------~~v~~Ll~~g~~~~~~~~~-g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 133 (294)
+++++|+++|++++.++.. |.||||+|+..|+.+++++|+++|++++.
T Consensus 117 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~ 196 (477)
T PHA02878 117 FKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNI 196 (477)
T ss_pred HHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC
Confidence 2677788889999999988 99999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC----CCcccccCcchhhhhcccC-CCCCceee
Q 022605 134 RDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR----EVPEYELNPLELQVRKADG-ITKGSYQV 205 (294)
Q Consensus 134 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~----~~~~~l~~~~~~~~~~~~~-~~~t~l~~ 205 (294)
.|..|.||||+|+..|+.+++++|++.|++++.. |.||||+|+.. +++++|+..+ .+++..+. .|.||||.
T Consensus 197 ~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~g-advn~~~~~~g~TpLh~ 275 (477)
T PHA02878 197 PDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHG-VDVNAKSYILGLTALHS 275 (477)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcC-CCCCccCCCCCCCHHHH
Confidence 9999999999999999999999999999998654 99999999743 5677887765 55555554 68999999
Q ss_pred eeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC-CCchhhhhhhh
Q 022605 206 AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAV 254 (294)
Q Consensus 206 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~iv~~L~~~ 254 (294)
| .++.+++++|++.|++....+..|.||+++|++.+ +.+++++|...
T Consensus 276 A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~ 323 (477)
T PHA02878 276 S--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323 (477)
T ss_pred H--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHH
Confidence 9 57889999999999988888899999999999864 56788887654
No 22
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.2e-31 Score=257.40 Aligned_cols=237 Identities=17% Similarity=0.104 Sum_probs=145.6
Q ss_pred cCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-
Q 022605 47 GRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLL- 125 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll- 125 (294)
..++..+.++.++..+...+..+..|.||||+||..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+
T Consensus 153 i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~ 232 (682)
T PHA02876 153 IQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIID 232 (682)
T ss_pred HHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3556666777777777777778888888888888888888888888888888877777777777777766666555443
Q ss_pred ----------------------------hCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCCCCC---CCCCcc
Q 022605 126 ----------------------------SKKANIDARDRWGSTAAADAKYYGNV-EVYNILKARGAKVPKT---KRTPMT 173 (294)
Q Consensus 126 ----------------------------~~gad~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~ga~~~~~---~~t~l~ 173 (294)
+.|++++..|..|.||||+|+..++. +++++|++.|++++.. |.||||
T Consensus 233 ~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh 312 (682)
T PHA02876 233 NRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLY 312 (682)
T ss_pred cCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 34455666666677777777776664 4667777777766433 667777
Q ss_pred ccCCCC----CcccccCcchhhhhcccCCCCCceeeeeec-CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchh
Q 022605 174 VANPRE----VPEYELNPLELQVRKADGITKGSYQVAKWN-GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVV 248 (294)
Q Consensus 174 ~a~~~~----~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv 248 (294)
+|+..+ .+++|+..+ .+++..+..|.||||.|+.. ++.+++++|++.+......+..|.||||+|+..++.+++
T Consensus 313 ~Aa~~g~~~~~v~~Ll~~g-adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv 391 (682)
T PHA02876 313 LMAKNGYDTENIRTLIMLG-ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVII 391 (682)
T ss_pred HHHHhCCCHHHHHHHHHcC-CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHH
Confidence 765432 233333322 33444444555555555543 234555555555544444444555555555555555555
Q ss_pred hhhhhhcCCCCeE---------EE-----------------EecCCCCCCCccccccccccc
Q 022605 249 QFVGAVTQNIPMM---------IV-----------------LEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 249 ~~L~~~~~~~~l~---------~~-----------------~e~~~~g~l~~t~l~~a~~n~ 284 (294)
++|...+++.... ++ .+....+..|.||||+|+.++
T Consensus 392 ~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 392 NTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred HHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 5555444432110 00 013345667888888888754
No 23
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.4e-31 Score=256.89 Aligned_cols=241 Identities=17% Similarity=0.106 Sum_probs=137.3
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHH-----------------------
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLL----------------------- 92 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll----------------------- 92 (294)
+..+.++++.++..|+.+.++.++..+......+.+|.||||.|+..|+.+++++|+
T Consensus 175 d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~ 254 (682)
T PHA02876 175 DIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLE 254 (682)
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHH
Confidence 344566777777777777777776666555544445555555555544444433322
Q ss_pred ------hcCCCCCCCCCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHCCCC-
Q 022605 93 ------NEGSDVNSIDLDGRTALHIAACEGHV-EVVKLLLSKKANIDARDRWGSTAAADAKYYG-NVEVYNILKARGAK- 163 (294)
Q Consensus 93 ------~~g~~~~~~~~~g~TpLh~A~~~g~~-~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~- 163 (294)
+.|++++..|..|.||||+|+..++. +++++|++.|++++..|..|.||||+|+..| ..+++++|+..|++
T Consensus 255 ~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi 334 (682)
T PHA02876 255 TSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADV 334 (682)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC
Confidence 23334444444455555555555443 3455555555555555555555555555544 24444555544444
Q ss_pred ---------------------------------CCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCcee
Q 022605 164 ---------------------------------VPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQ 204 (294)
Q Consensus 164 ---------------------------------~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~ 204 (294)
++.. |.||||+|+.. +++++|+..+ .+++..+..|.||||
T Consensus 335 n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g-ad~~~~~~~g~T~Lh 413 (682)
T PHA02876 335 NAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG-ADIEALSQKIGTALH 413 (682)
T ss_pred CCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCccccCCCCCchHH
Confidence 4322 44555554332 2333444332 333344444455555
Q ss_pred eeeecCc-hhhhHhhhccCCCChHhhhhhhhHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccc
Q 022605 205 VAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSF 282 (294)
Q Consensus 205 ~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~ 282 (294)
+|+..++ ..++++|++.|+.....+..|.||||+|+..+ +.+++++|...+++. ...+..|.|||++|+.
T Consensus 414 ~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~--------n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 414 FALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADV--------NAINIQNQYPLLIALE 485 (682)
T ss_pred HHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHH
Confidence 5544333 34455555555555556678899999999876 679999999988864 4467888999999998
Q ss_pred ccc
Q 022605 283 HKQ 285 (294)
Q Consensus 283 n~~ 285 (294)
++.
T Consensus 486 ~~~ 488 (682)
T PHA02876 486 YHG 488 (682)
T ss_pred hCC
Confidence 764
No 24
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=3.4e-31 Score=241.04 Aligned_cols=234 Identities=22% Similarity=0.131 Sum_probs=135.2
Q ss_pred CCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q 022605 49 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 128 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g 128 (294)
....+.+..++..+......+..+.+|+|+|+..|+.++++.|+++|+|+|..|..|.||||+||..++.|..+.|++.|
T Consensus 98 ~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~ 177 (929)
T KOG0510|consen 98 YNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKG 177 (929)
T ss_pred cchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcC
Confidence 33445555556666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCC---CCCCCCccccCCCCCcccc---cCcc---------
Q 022605 129 ANIDARDRWGSTAAADAKYYGNVEVYNILKA-----RGAKVP---KTKRTPMTVANPREVPEYE---LNPL--------- 188 (294)
Q Consensus 129 ad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~---~~~~t~l~~a~~~~~~~~l---~~~~--------- 188 (294)
+|+...|.+|++|+|.|+..|..++.+..+. ++..+| ..+.||||.|...+..+.+ +..+
T Consensus 178 a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~ 257 (929)
T KOG0510|consen 178 ADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLD 257 (929)
T ss_pred CCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhH
Confidence 6666666666666666666666666666665 333332 2256666666554332211 1111
Q ss_pred -----hhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEE
Q 022605 189 -----ELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIV 263 (294)
Q Consensus 189 -----~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~ 263 (294)
...++..|..|.||||+|++.|++++++.|+..|++...+++++.||+|.|+..|+.+.|+-|+. ..+..
T Consensus 258 ~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~r---- 332 (929)
T KOG0510|consen 258 AMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTR---- 332 (929)
T ss_pred HHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh-CcCcc----
Confidence 11234455566666666666666666666666666666555666666666666666666666655 11110
Q ss_pred EecCCCCCCCccccccccccccccc
Q 022605 264 LEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 264 ~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
-....+-.|.||||+|+.+|+..+
T Consensus 333 -llne~D~~g~tpLHlaa~~gH~~v 356 (929)
T KOG0510|consen 333 -LLNESDLHGMTPLHLAAKSGHDRV 356 (929)
T ss_pred -ccccccccCCCchhhhhhcCHHHH
Confidence 122233445566666665555544
No 25
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=241.72 Aligned_cols=203 Identities=13% Similarity=0.089 Sum_probs=176.2
Q ss_pred ccccCCCCCCCCCCCCCCCchhHHHHHHHc---CCHHHHHHHHhcCCCC-CCCCCCCCcHHHHHHHc--CcHHHHHHHHh
Q 022605 53 DPIRRSPVQDELTVPENLDSTMQLLFMACR---GDVKGVEDLLNEGSDV-NSIDLDGRTALHIAACE--GHVEVVKLLLS 126 (294)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~-~~~~~~g~TpLh~A~~~--g~~~~v~~Ll~ 126 (294)
+.++.+++.+...+..+..|.||||.|+.. |+.++|++|+++|+|+ +.+|..|.||||+|+.. ++.++|++|++
T Consensus 89 ~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~ 168 (494)
T PHA02989 89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS 168 (494)
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence 456778888888888999999999988765 6899999999999999 79999999999998764 68999999999
Q ss_pred CCCCCCC-CCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCCC---CCCCccccCCC---------CCcccccCcch
Q 022605 127 KKANIDA-RDRWGSTAAADAKYYG----NVEVYNILKARGAKVPKT---KRTPMTVANPR---------EVPEYELNPLE 189 (294)
Q Consensus 127 ~gad~~~-~~~~g~t~L~~A~~~g----~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---------~~~~~l~~~~~ 189 (294)
+|+|++. .+..|.||||+|+..+ +.+++++|+++|++++.. +.|+++.+... +++++++. .
T Consensus 169 ~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~--~ 246 (494)
T PHA02989 169 FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK--Y 246 (494)
T ss_pred cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh--C
Confidence 9999998 6889999999998764 899999999999999755 78888865332 23344443 2
Q ss_pred hhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 190 LQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 190 ~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
++++..+..|.||||+|+..|+.+++++|++.|++....+..|.||+|+|+..++.+++++|.....+
T Consensus 247 advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 67788889999999999999999999999999998888888999999999999999999999876544
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=1.2e-30 Score=237.54 Aligned_cols=236 Identities=18% Similarity=0.145 Sum_probs=183.0
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHh-----cCCCCCCCCCCCCcHHH
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLN-----EGSDVNSIDLDGRTALH 110 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-----~g~~~~~~~~~g~TpLh 110 (294)
+....++++.++..++.+..+.++..+...-..+.+|.+|+|.|+.+|..++.+..+. .+..+|.-+..|.||||
T Consensus 151 de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLh 230 (929)
T KOG0510|consen 151 DENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLH 230 (929)
T ss_pred ccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchh
Confidence 3344455566666666664455555666666666667777777777777777777765 44566666677788888
Q ss_pred HHHHcCcHHHHHHHHhCCCC---------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCc
Q 022605 111 IAACEGHVEVVKLLLSKKAN---------------IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPM 172 (294)
Q Consensus 111 ~A~~~g~~~~v~~Ll~~gad---------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l 172 (294)
.|+..|++++++.++++|+. +|..|++|.||||+|+..|+.++++.|+..|++++.+ +.|||
T Consensus 231 lAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spL 310 (929)
T KOG0510|consen 231 LAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPL 310 (929)
T ss_pred hhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCch
Confidence 88888888888888887653 2456889999999999999999999999999998644 89999
Q ss_pred cccCCCC---CcccccC-cchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCCh---HhhhhhhhHHHHHHHcCCC
Q 022605 173 TVANPRE---VPEYELN-PLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDP---ERINAFTHELTIVEKARHP 245 (294)
Q Consensus 173 ~~a~~~~---~~~~l~~-~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~t~l~~a~~~~~~ 245 (294)
|.|+..+ .++-|+. .....++..|..|.||||+|+..|+..+++.|+..|+... ..+.+|.||||.|++.|++
T Consensus 311 H~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 311 HFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNT 390 (929)
T ss_pred HHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccH
Confidence 9997763 4555565 4456788889999999999999999999999999988666 4477899999999999999
Q ss_pred chhhhhhhhcCCCCeEEEEecCCCCCCCcccccc
Q 022605 246 NVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLT 279 (294)
Q Consensus 246 ~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~ 279 (294)
.+|++|.+.+++. ..++..|.++|++
T Consensus 391 ~av~~Li~~Ga~I--------~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 391 SAVQKLISHGADI--------GVKNKKGKSAFDT 416 (929)
T ss_pred HHHHHHHHcCCce--------eeccccccccccc
Confidence 9999999999863 3455566666664
No 27
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96 E-value=1.1e-29 Score=226.75 Aligned_cols=203 Identities=23% Similarity=0.227 Sum_probs=179.4
Q ss_pred chhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHcC
Q 022605 72 STMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKYYG 149 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A~~~g 149 (294)
..+.++.|+.+|.++.|+.|++. |.+++..|.+|.|+|||||.+++++++++|+++|||||... .-+.||||+|+++|
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 34568999999999999999998 99999999999999999999999999999999999999998 77899999999999
Q ss_pred CHHHHHHHHHCCCCCC---CCCCCCccccCCCC---CcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 150 NVEVYNILKARGAKVP---KTKRTPMTVANPRE---VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 150 ~~~~v~~Ll~~ga~~~---~~~~t~l~~a~~~~---~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
+..+|.+|+++|||++ .+|.+|+|+|+..+ .+-|++..+ .+++..|..|.||||+|+++|....+..|++.++
T Consensus 124 ~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a 202 (600)
T KOG0509|consen 124 HISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA 202 (600)
T ss_pred cHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc
Confidence 9999999999999985 55999999998764 455666666 8889999999999999999999887888998888
Q ss_pred CChHhh-hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccc
Q 022605 224 KDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFH 283 (294)
Q Consensus 224 ~~~~~~-~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n 283 (294)
.....+ ++|.||||+|+..|+..++.++.+.+.+ +...+.-|.||+.+|...
T Consensus 203 ~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~--------~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 203 SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD--------LDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cccccccccCCchHHHHHhcCCcceEehhhhcCCc--------ccccccCCCCHHHHHHHh
Confidence 777776 7899999999999999999966665555 333444489999999766
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=5.4e-30 Score=236.86 Aligned_cols=221 Identities=13% Similarity=0.135 Sum_probs=185.8
Q ss_pred CCCCCccccccC-----CCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCcH
Q 022605 37 PRRNNMRFSFGR-----QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRG---DVKGVEDLLNEGSDVNSIDLDGRTA 108 (294)
Q Consensus 37 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~~~~g~Tp 108 (294)
..+.++++.+.. .+..+.++.++..+...+..+..|.||||+|+..+ +.+++++|+++|++++.+|..|.||
T Consensus 69 ~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tp 148 (489)
T PHA02798 69 NEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTM 148 (489)
T ss_pred CCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcH
Confidence 344455544332 23467788888889998999999999999999976 7899999999999999999999999
Q ss_pred HHHHHHcCc---HHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHc----CCHHHHHHHHHCCCCCCCC---CCCCcc----
Q 022605 109 LHIAACEGH---VEVVKLLLSKKANIDARD-RWGSTAAADAKYY----GNVEVYNILKARGAKVPKT---KRTPMT---- 173 (294)
Q Consensus 109 Lh~A~~~g~---~~~v~~Ll~~gad~~~~~-~~g~t~L~~A~~~----g~~~~v~~Ll~~ga~~~~~---~~t~l~---- 173 (294)
||+|+..++ .+++++|+++|+|++..+ ..|.||||.++.. ++.+++++|+++|++++.. +.++++
T Consensus 149 L~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~ 228 (489)
T PHA02798 149 LQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLN 228 (489)
T ss_pred HHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHH
Confidence 999999998 999999999999999885 5789999998765 4799999999999998754 677765
Q ss_pred ---ccCC---CCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCch
Q 022605 174 ---VANP---REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNV 247 (294)
Q Consensus 174 ---~a~~---~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~i 247 (294)
++.. ..++.+++. ..+++..+..|.||||.|+..|+.+++++|++.|++....+..|.||+++|++.++.++
T Consensus 229 ~l~~~~~~~~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~i 306 (489)
T PHA02798 229 SLLYDNKRFKKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFI 306 (489)
T ss_pred HHHhhcccchHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHH
Confidence 1222 233444443 26788888999999999999999999999999999988888999999999999999999
Q ss_pred hhhhhhhcCCCC
Q 022605 248 VQFVGAVTQNIP 259 (294)
Q Consensus 248 v~~L~~~~~~~~ 259 (294)
++.|...+.++.
T Consensus 307 v~~lL~~~~~~~ 318 (489)
T PHA02798 307 FNSILNKKPNKN 318 (489)
T ss_pred HHHHHccCCCHH
Confidence 999988776653
No 29
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=3.6e-29 Score=205.81 Aligned_cols=177 Identities=14% Similarity=0.139 Sum_probs=141.9
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCCCHHHHH
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG--HVEVVKLLLSKKANIDARD-RWGSTAAADA 145 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g--~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A 145 (294)
...+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ +.+++++|+++|++++.++ ..|+||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 45578999999999999999999975 4667888999999999854 8999999999999999987 5899999998
Q ss_pred HHc---CCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeee--cCchhhhHhhhc
Q 022605 146 KYY---GNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKW--NGTKVWVKILDK 220 (294)
Q Consensus 146 ~~~---g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~--~g~~~~v~~Ll~ 220 (294)
+.. ++.+++++|+++|+++|.. +..|.||||.|+. .++.+++++|++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~----------------------------d~~G~TpLh~a~~~~~~~~~iv~~Li~ 146 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEE----------------------------DEDGKNLLHMYMCNFNVRINVIKLLID 146 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCc----------------------------CCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence 764 4799999999999987543 4455666666653 457888888888
Q ss_pred cCCCChHhhhhhhhHHHH-HHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 221 ESHKDPERINAFTHELTI-VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 221 ~~~~~~~~~~~~~t~l~~-a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
.+++....+..|.||+|. ++..++.+++++|...+.+ ....+..|.|||++|..++
T Consensus 147 ~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gad--------i~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 147 SGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGID--------INETNKSGYNCYDLIKFRN 203 (209)
T ss_pred cCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCC--------CCCCCCCCCCHHHHHhhhh
Confidence 887777777778888885 5567788888888887775 3446677888888887654
No 30
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=2.2e-29 Score=216.95 Aligned_cols=185 Identities=23% Similarity=0.259 Sum_probs=123.7
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCC--------CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSI--------DLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW 137 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~--------~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~ 137 (294)
....+|.|||.+||++|+.++|++|+++ ++++... ..+|-+||-.|+..||+++|+.|+++|++||....-
T Consensus 37 ~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T 116 (615)
T KOG0508|consen 37 GEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT 116 (615)
T ss_pred ccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence 4456677888888888888888888884 4554322 246778888888888888888888888888888888
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCc
Q 022605 138 GSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGT 211 (294)
Q Consensus 138 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~ 211 (294)
..|||--||..|+.++|+||+++|+|++.. |.|.|++||.+ +++++|++.+ .+++.++..|.|+||.++..|+
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~g-ADvn~ks~kGNTALH~caEsG~ 195 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQG-ADVNAKSYKGNTALHDCAESGS 195 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhC-CCcchhcccCchHHHhhhhccc
Confidence 888888888888888888888888887433 55555555443 2334444332 4445555555666666666666
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~ 253 (294)
.+++++|++.++ ...++..|.|||..|+..|+.+||++|..
T Consensus 196 vdivq~Ll~~ga-~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 196 VDIVQLLLKHGA-KIDVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HHHHHHHHhCCc-eeeecCCCCchHHHHhhhcchHHHHHHhc
Confidence 666666664443 22333445566666666666666666554
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=9.2e-30 Score=219.27 Aligned_cols=185 Identities=22% Similarity=0.231 Sum_probs=161.4
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCC---------CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELT---------VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLD 104 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~ 104 (294)
+..+++..++..+++.|..+.++.+++.-... +....+|-+||..|+..||+++|+.|+++|+++|.....
T Consensus 37 ~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T 116 (615)
T KOG0508|consen 37 GEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT 116 (615)
T ss_pred ccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence 44567778999999999998888776632211 234567889999999999999999999999999998888
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---
Q 022605 105 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR--- 178 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~--- 178 (294)
..|||--||.-|++++|+||+++|+|++..|+.|.|+||+||..|+.+|++||++.|+|+|.+ |.|+||.+++.
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccH
Confidence 999999999999999999999999999999999999999999999999999999999999866 99999999865
Q ss_pred CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhc
Q 022605 179 EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220 (294)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~ 220 (294)
+++++|+..+. .-..++.|.|||..|+..|+.++|.+|++
T Consensus 197 divq~Ll~~ga--~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 197 DIVQLLLKHGA--KIDVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HHHHHHHhCCc--eeeecCCCCchHHHHhhhcchHHHHHHhc
Confidence 66777776652 22346679999999999999999999996
No 32
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=8.2e-29 Score=203.65 Aligned_cols=176 Identities=15% Similarity=0.082 Sum_probs=151.3
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcC--CHHHHHHHHhcCCCCCCCC-CCCCcHHHHHH
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRG--DVKGVEDLLNEGSDVNSID-LDGRTALHIAA 113 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g--~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~ 113 (294)
....++++.++..++.+.++.++.. ....+..|.||||+|+..+ +.+++++|+++|+++|.++ ..|.||||+|+
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYL 95 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence 3456778888889999988887653 3456788999999999854 8999999999999999997 58999999988
Q ss_pred Hc---CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH--cCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcc
Q 022605 114 CE---GHVEVVKLLLSKKANIDARDRWGSTAAADAKY--YGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPL 188 (294)
Q Consensus 114 ~~---g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~ 188 (294)
.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|++.|++++..
T Consensus 96 ~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~--------------------- 154 (209)
T PHA02859 96 SFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK--------------------- 154 (209)
T ss_pred HhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc---------------------
Confidence 64 47999999999999999999999999999986 46899999999999887443
Q ss_pred hhhhhcccCCCCCceee-eeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC
Q 022605 189 ELQVRKADGITKGSYQV-AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243 (294)
Q Consensus 189 ~~~~~~~~~~~~t~l~~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 243 (294)
+..|.||||. |+..++.+++++|++.|......+..|.||+++|..++
T Consensus 155 -------d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 155 -------DFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred -------cCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 5567889985 56778999999999999888778889999999998764
No 33
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=7.2e-30 Score=244.76 Aligned_cols=251 Identities=18% Similarity=0.115 Sum_probs=212.0
Q ss_pred CCCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 022605 33 SSFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIA 112 (294)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A 112 (294)
...+.+..+..+.++..+..+.++-++..+...+..+..|.||||.|+.+++..+|+.++++|++++..+..|.||+|+|
T Consensus 368 ~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhva 447 (1143)
T KOG4177|consen 368 RQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVA 447 (1143)
T ss_pred CcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhh
Confidence 34445566666777778888888888888888888888888999999999999999888888888888888889999999
Q ss_pred HHcC-cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCc---cccc
Q 022605 113 ACEG-HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVP---EYEL 185 (294)
Q Consensus 113 ~~~g-~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~---~~l~ 185 (294)
+..| ..+++..+++.|+++|.....|.||||+|++.|+.+++..|++.++..+.. +-+++|.+...+.+ +.++
T Consensus 448 a~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~ 527 (1143)
T KOG4177|consen 448 AKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILL 527 (1143)
T ss_pred hhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHh
Confidence 8888 888888888889899888888999999999999999999998888665443 88888888776544 3333
Q ss_pred CcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEe
Q 022605 186 NPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLE 265 (294)
Q Consensus 186 ~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e 265 (294)
.. +.+.+...+.+.||||.|+..|+..+|++|++++++....++.|+||||.|+..|+.+|+.+|...++++
T Consensus 528 ~~-ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v------- 599 (1143)
T KOG4177|consen 528 EH-GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV------- 599 (1143)
T ss_pred hc-CCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC-------
Confidence 33 3677778888999999999999999999999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCcccccccccccccccCCCC
Q 022605 266 YHAKVSMPITPFLTLSFHKQTHTSGGK 292 (294)
Q Consensus 266 ~~~~g~l~~t~l~~a~~n~~~~~~~~~ 292 (294)
....-.+.|||++|+.++.++++..+
T Consensus 600 -na~d~~g~TpL~iA~~lg~~~~~k~l 625 (1143)
T KOG4177|consen 600 -NAADLDGFTPLHIAVRLGYLSVVKLL 625 (1143)
T ss_pred -CcccccCcchhHHHHHhcccchhhHH
Confidence 44667788999999999999987654
No 34
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=9.6e-29 Score=233.25 Aligned_cols=221 Identities=14% Similarity=0.054 Sum_probs=173.3
Q ss_pred ccccCCCCCCCCCCCCCCCchhHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH----HHHHHHH
Q 022605 53 DPIRRSPVQDELTVPENLDSTMQLLFMACR---GDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV----EVVKLLL 125 (294)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~----~~v~~Ll 125 (294)
+.++.++..+......|.+|.||||+||.. |+.++|++||++|++++.++..|+||||+|+..|+. ++++.|+
T Consensus 13 ~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll 92 (661)
T PHA02917 13 DELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALL 92 (661)
T ss_pred HHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHH
Confidence 455666767777777799999999998665 889999999999999999999999999999999985 4567888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCcccc--CC---CCCcccccCcchhhhhccc-
Q 022605 126 SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVA--NP---REVPEYELNPLELQVRKAD- 196 (294)
Q Consensus 126 ~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a--~~---~~~~~~l~~~~~~~~~~~~- 196 (294)
+.+..++..+. .+++|+|+..++.++|++|+++|+++|.. |+|||+.+ +. .+++++|++.+ .+++..+
T Consensus 93 ~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~G-a~vn~~d~ 169 (661)
T PHA02917 93 EATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENG-CSVLYEDE 169 (661)
T ss_pred hccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcC-CCcccccc
Confidence 87554555442 36778899999999999999999999764 99999954 22 37888999876 3443222
Q ss_pred --CCC-----------CCceeeeee-----------cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCC--chhhh
Q 022605 197 --GIT-----------KGSYQVAKW-----------NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHP--NVVQF 250 (294)
Q Consensus 197 --~~~-----------~t~l~~A~~-----------~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~--~iv~~ 250 (294)
..| .||||+|+. .++.++|++|++.|++....+..|.||||+|+..|+. +||++
T Consensus 170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~ 249 (661)
T PHA02917 170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKL 249 (661)
T ss_pred ccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHH
Confidence 223 599999975 5689999999999998888889999999999999996 69999
Q ss_pred hhhhcCCCCeEEEEecCCCCCCCcccccccc
Q 022605 251 VGAVTQNIPMMIVLEYHAKVSMPITPFLTLS 281 (294)
Q Consensus 251 L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~ 281 (294)
|.. +.+..-. -...+..+.||+++|+
T Consensus 250 Li~-g~d~~~~----~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 250 LMK-GIDNTAY----SYIDDLTCCTRGIMAD 275 (661)
T ss_pred HHh-CCccccc----ccccCcccccchHHHH
Confidence 964 5442110 1124556667777777
No 35
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.2e-28 Score=232.58 Aligned_cols=232 Identities=12% Similarity=-0.064 Sum_probs=176.0
Q ss_pred cccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHH--HcCCHHHHHHHHhcCCCCCCCCC---CC-----------CcH
Q 022605 45 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMA--CRGDVKGVEDLLNEGSDVNSIDL---DG-----------RTA 108 (294)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa--~~g~~~~v~~Ll~~g~~~~~~~~---~g-----------~Tp 108 (294)
.++..++.+.++.++..+...+..+..|.||||.|+ ..|+.++|++|+++|+++|.+|. .| .||
T Consensus 109 ~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~ 188 (661)
T PHA02917 109 MKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTV 188 (661)
T ss_pred HHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccH
Confidence 345566778888899899999999999999999654 47899999999999999987653 34 599
Q ss_pred HHHHHH-----------cCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHHCCCCCCC-------CC
Q 022605 109 LHIAAC-----------EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV--EVYNILKARGAKVPK-------TK 168 (294)
Q Consensus 109 Lh~A~~-----------~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~--~~v~~Ll~~ga~~~~-------~~ 168 (294)
||+|+. .++.++|++|+++|+|+|..|..|+||||+|+..|+. ++|++|++ |++++. .+
T Consensus 189 L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~ 267 (661)
T PHA02917 189 LHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTC 267 (661)
T ss_pred HHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCccc
Confidence 999986 5689999999999999999999999999999999985 78999875 765531 13
Q ss_pred CCCccccCC---------------------------------------------------------------------CC
Q 022605 169 RTPMTVANP---------------------------------------------------------------------RE 179 (294)
Q Consensus 169 ~t~l~~a~~---------------------------------------------------------------------~~ 179 (294)
.+|+++|+. .+
T Consensus 268 ~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 347 (661)
T PHA02917 268 CTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIP 347 (661)
T ss_pred ccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHH
Confidence 333333220 00
Q ss_pred CcccccCcc-----------------------------hhhhhcccCCCCCceeeeeecC--------------------
Q 022605 180 VPEYELNPL-----------------------------ELQVRKADGITKGSYQVAKWNG-------------------- 210 (294)
Q Consensus 180 ~~~~l~~~~-----------------------------~~~~~~~~~~~~t~l~~A~~~g-------------------- 210 (294)
++++|++.+ +.++...+..|.||||.|++.+
T Consensus 348 ~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~ 427 (661)
T PHA02917 348 LVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSY 427 (661)
T ss_pred HHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhh
Confidence 122332221 1122333445889999876432
Q ss_pred ---chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccc-ccc
Q 022605 211 ---TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSF-HKQ 285 (294)
Q Consensus 211 ---~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~-n~~ 285 (294)
..+++++|++.|++...++..|+||||+|+..++.+++++|...+++ ....+..|.||||+|+. +++
T Consensus 428 ~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAd--------in~~d~~G~T~L~~A~~~~~~ 498 (661)
T PHA02917 428 ACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSD--------VNIRSNNGYTCIAIAINESRN 498 (661)
T ss_pred hhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCC--------CCCCCCCCCCHHHHHHHhCCC
Confidence 35677999999988888888899999999999999999999998886 45567888999999986 444
No 36
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.1e-27 Score=212.15 Aligned_cols=193 Identities=10% Similarity=-0.016 Sum_probs=164.8
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCC------CCCCCCCcHHHHHHH--cCcHHHHHHHHhCCCC
Q 022605 59 PVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVN------SIDLDGRTALHIAAC--EGHVEVVKLLLSKKAN 130 (294)
Q Consensus 59 ~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------~~~~~g~TpLh~A~~--~g~~~~v~~Ll~~gad 130 (294)
+..+...+....++ +|+..+..+++++|+.+|+++| .++..++|+||.|+. .|+.++|++|+++|||
T Consensus 69 ~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GAD 143 (437)
T PHA02795 69 RIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAV 143 (437)
T ss_pred HHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCC
Confidence 33444444444444 8999999999999999999998 788899999999999 9999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---------CCCCccccCCC---CCcccccCcchhhhhcccCC
Q 022605 131 IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---------KRTPMTVANPR---EVPEYELNPLELQVRKADGI 198 (294)
Q Consensus 131 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---------~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~ 198 (294)
++.. .+.||+|.|+..++.+++++|+++|++.+.. +.|++|.|+.. +++++|+..+ .+++..+..
T Consensus 144 In~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-ADIN~kD~~ 220 (437)
T PHA02795 144 IYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-EDINQLDAG 220 (437)
T ss_pred CCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-CCcCcCCCC
Confidence 9985 4589999999999999999999999864322 55666666554 6778888766 788888999
Q ss_pred CCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCC--------CchhhhhhhhcCCCC
Q 022605 199 TKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARH--------PNVVQFVGAVTQNIP 259 (294)
Q Consensus 199 ~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~--------~~iv~~L~~~~~~~~ 259 (294)
|.||||+|+..|+.+++++|++.|+.....+..|.||||+|+..|+ .+++++|...+++.+
T Consensus 221 G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 221 GRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999888888999999999999984 589999988877653
No 37
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-27 Score=191.35 Aligned_cols=230 Identities=26% Similarity=0.348 Sum_probs=184.0
Q ss_pred cccccCCCCCccccCCCCCCCC-CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 022605 43 RFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVV 121 (294)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v 121 (294)
.|.+++.|+.-.++..+....- .+..|..|.+||||||..|+..+|+.|+.+|+.+|..+....||||+|+..||.++|
T Consensus 4 if~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred hhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHH
Confidence 5788899998888766665544 456788899999999999999999999999999999998889999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCccccCCC----------------CCcc
Q 022605 122 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR----------------EVPE 182 (294)
Q Consensus 122 ~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~---~~~~~t~l~~a~~~----------------~~~~ 182 (294)
+.|++..+|+|+.+..|.|||||||+.|+..+.+-|+..|+-+ |..|.||+..|... ..+.
T Consensus 84 qkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nrip 163 (448)
T KOG0195|consen 84 QKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNRIP 163 (448)
T ss_pred HHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999999999999999999999999999999987 55699999877210 0000
Q ss_pred c----------------cc-----CcchhhhhcccCC-CCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHH
Q 022605 183 Y----------------EL-----NPLELQVRKADGI-TKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVE 240 (294)
Q Consensus 183 ~----------------l~-----~~~~~~~~~~~~~-~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~ 240 (294)
+ |. +.+.+++..+-.. ...-+...-++|+--+++.|- -.........++.+..-...
T Consensus 164 fkdt~wkgtktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~-vr~~t~risrdfneefp~lr 242 (448)
T KOG0195|consen 164 FKDTTWKGTKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILN-VREVTARISRDFNEEFPALR 242 (448)
T ss_pred ccccccccccccccccccccccCcchhhhhhhhhhccCCCcccccccccCcchhhhhhh-hhhcchhhcchhhhhCccee
Confidence 0 00 0011111111111 123466677778877777774 34455566677888888888
Q ss_pred HcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 241 ~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...|++|+..|.+|.+.|.+.++..|++.|+++
T Consensus 243 ifshpnilpvlgacnsppnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 243 IFSHPNILPVLGACNSPPNLVIISQYMPFGSLY 275 (448)
T ss_pred eecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence 899999999999999999999999999999987
No 38
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=4.8e-26 Score=221.86 Aligned_cols=171 Identities=24% Similarity=0.215 Sum_probs=127.3
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~ 147 (294)
.+.++.++||.||..|+.++++.|++.|+|+|..|..|.||||+|+..|+.+++++|+++|+|+|.+|.+|+||||+|+.
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~ 600 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence 34456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC-CCCCccccCCCC---CcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 148 YGNVEVYNILKARGAKVPKT-KRTPMTVANPRE---VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~~-~~t~l~~a~~~~---~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
.|+.+++++|++.++..+.. +.++||+|+..+ .+++|++.+ .+++..+..|.||||.|+..|+.+++++|++.|+
T Consensus 601 ~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~G-adin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA 679 (823)
T PLN03192 601 AKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQG-LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA 679 (823)
T ss_pred hCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 99999999999887665432 445555554432 233343332 3444445555555555555555555555555554
Q ss_pred CChHhhhhh-hhHHHHH
Q 022605 224 KDPERINAF-THELTIV 239 (294)
Q Consensus 224 ~~~~~~~~~-~t~l~~a 239 (294)
+....+..+ .+|.+.+
T Consensus 680 dv~~~~~~g~~t~~~l~ 696 (823)
T PLN03192 680 DVDKANTDDDFSPTELR 696 (823)
T ss_pred CCCCCCCCCCCCHHHHH
Confidence 444444333 4554444
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=4.1e-26 Score=179.06 Aligned_cols=203 Identities=20% Similarity=0.117 Sum_probs=132.5
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
|.+...+..++..++...+...+..+...+..+.-+++|+.+++...+++++..+.++ .+|..|+.|.|||+||+..|
T Consensus 94 p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G 171 (296)
T KOG0502|consen 94 PEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKG 171 (296)
T ss_pred chhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcC
Confidence 3344444555555555555555555555555555555555555555555555544433 24455555566666666666
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhccc
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKAD 196 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~ 196 (294)
++++|++|++.|||++...+...|+|.+|+..|..++|++|+.++.|+ +..|
T Consensus 172 ~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdV----------------------------NvyD 223 (296)
T KOG0502|consen 172 HIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDV----------------------------NVYD 223 (296)
T ss_pred chHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc----------------------------ceec
Confidence 666666666666655555555555566666555566666665555554 4456
Q ss_pred CCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccc
Q 022605 197 GITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITP 276 (294)
Q Consensus 197 ~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~ 276 (294)
-.|.|||-+|++.|+.+||+.|+..|++.....+.|+++++.|+..|+. +|+..+..... ..-++++.+||
T Consensus 224 wNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~l--------kl~Q~~~~~~~ 294 (296)
T KOG0502|consen 224 WNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHAL--------KLCQDSEKRTP 294 (296)
T ss_pred cCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHH--------HHhhcccCCCC
Confidence 6788999999999999999999999999988889999999999999998 77766555443 23356666677
Q ss_pred cc
Q 022605 277 FL 278 (294)
Q Consensus 277 l~ 278 (294)
+|
T Consensus 295 ~~ 296 (296)
T KOG0502|consen 295 LH 296 (296)
T ss_pred CC
Confidence 65
No 40
>PHA02730 ankyrin-like protein; Provisional
Probab=99.93 E-value=7.1e-26 Score=209.72 Aligned_cols=187 Identities=14% Similarity=0.043 Sum_probs=154.0
Q ss_pred CCCCCCchhHHHHHHHcC---CHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHHhCCC--CCCCCCCCC
Q 022605 66 VPENLDSTMQLLFMACRG---DVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG--HVEVVKLLLSKKA--NIDARDRWG 138 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g--~~~~v~~Ll~~ga--d~~~~~~~g 138 (294)
...|.+|.||||+|+..| +.++|++||++|||++.+|..|+||||+|+..+ +.++|++|+++|+ +++..++.+
T Consensus 35 ~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~ 114 (672)
T PHA02730 35 KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN 114 (672)
T ss_pred hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC
Confidence 467888999999999997 599999999999999999999999999999976 7999999999965 457888889
Q ss_pred CCHHHHHHH--cCCHHHHHHHHH-CCCCCCC--------CCCCCccccCCC---CCcccccCcchhhhh-------cccC
Q 022605 139 STAAADAKY--YGNVEVYNILKA-RGAKVPK--------TKRTPMTVANPR---EVPEYELNPLELQVR-------KADG 197 (294)
Q Consensus 139 ~t~L~~A~~--~g~~~~v~~Ll~-~ga~~~~--------~~~t~l~~a~~~---~~~~~l~~~~~~~~~-------~~~~ 197 (294)
.+|||.++. +++.++|++|++ .+++++. .|.+|++++... +++++|++.+. +.. ..+.
T Consensus 115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~-~v~g~~~~~~~~~~ 193 (672)
T PHA02730 115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSEC-YSTGYVFRSCMYDS 193 (672)
T ss_pred CchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCC-cccccccccccccC
Confidence 999999998 889999999997 6677532 378999999764 77888988762 221 1233
Q ss_pred CCCCceee-------eeecCchhhhHhhhccCCCChHhhhhhhhHHHH--HHHcCCCchhhhhhh
Q 022605 198 ITKGSYQV-------AKWNGTKVWVKILDKESHKDPERINAFTHELTI--VEKARHPNVVQFVGA 253 (294)
Q Consensus 198 ~~~t~l~~-------A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~--a~~~~~~~iv~~L~~ 253 (294)
...+|+.+ +...++.+++++|++.|++...++..|.||||+ +...++.|+|++|.+
T Consensus 194 ~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 194 DRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 33333322 257789999999999999888899999999995 555577999999998
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.92 E-value=1.5e-25 Score=215.19 Aligned_cols=223 Identities=22% Similarity=0.177 Sum_probs=163.2
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAA 113 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~ 113 (294)
..+.+....++..+....+..++-++..+......+..|.||||.|+..|+++++.+|+.+|+.++..+..|.||+|.|+
T Consensus 204 a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA 283 (1143)
T KOG4177|consen 204 ASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAA 283 (1143)
T ss_pred ccccCCCCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhh
Confidence 45567777888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCccccc--Ccc
Q 022605 114 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYEL--NPL 188 (294)
Q Consensus 114 ~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~~~l~--~~~ 188 (294)
..+..+++++|+++|+++...+....||+|+|...|+.++++++++.++.++.. |.||+|+++..+...+.. ...
T Consensus 284 ~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~ 363 (1143)
T KOG4177|consen 284 RAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEH 363 (1143)
T ss_pred ccchhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999998887654 778888776544332111 001
Q ss_pred hhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC
Q 022605 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256 (294)
Q Consensus 189 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~ 256 (294)
...-......+.||+|.|+..|+.+++++++..+.......+.|.||+|.++..+++.+|+++...++
T Consensus 364 ~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA 431 (1143)
T KOG4177|consen 364 GAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGA 431 (1143)
T ss_pred ccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCC
Confidence 11122223333444444444444444444444444433344444444444444444444444444333
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=4.4e-25 Score=204.49 Aligned_cols=209 Identities=12% Similarity=0.054 Sum_probs=172.7
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCchhHHHH--HHHcCCHHHHHHHHh--------------------------------
Q 022605 48 RQSSLDPIRRSPVQDELTVPENLDSTMQLLF--MACRGDVKGVEDLLN-------------------------------- 93 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~--Aa~~g~~~~v~~Ll~-------------------------------- 93 (294)
.+.+.+.++.++..+...+..|.+|.||||+ |...|+.|+|++|++
T Consensus 211 ~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (672)
T PHA02730 211 ESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTP 290 (672)
T ss_pred hccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhccc
Confidence 3455677788888899889999999999995 555688999999999
Q ss_pred cCCCCCC--------------------CCCCCCc---------------------HHHHHHHcC---cHHHHHHHHhCCC
Q 022605 94 EGSDVNS--------------------IDLDGRT---------------------ALHIAACEG---HVEVVKLLLSKKA 129 (294)
Q Consensus 94 ~g~~~~~--------------------~~~~g~T---------------------pLh~A~~~g---~~~~v~~Ll~~ga 129 (294)
+|+|+.. .+..|.+ .||.-...+ +.+++++|+++||
T Consensus 291 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GA 370 (672)
T PHA02730 291 YNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGA 370 (672)
T ss_pred CCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCC
Confidence 7888755 4556655 677777755 6899999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHCCCC--CC---CCCCCCccc---cCCC-------C-----Cccccc
Q 022605 130 NIDARDRWGSTAAADAKYYGN----VEVYNILKARGAK--VP---KTKRTPMTV---ANPR-------E-----VPEYEL 185 (294)
Q Consensus 130 d~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~--~~---~~~~t~l~~---a~~~-------~-----~~~~l~ 185 (294)
|+|.. ..|.||||+|+..++ .+++++|+++|++ ++ ..|.||||. +... + ++++|+
T Consensus 371 dIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LI 449 (672)
T PHA02730 371 TMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILS 449 (672)
T ss_pred CCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHH
Confidence 99985 789999999998875 8999999999984 55 349999983 3211 2 257777
Q ss_pred CcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhh-hhhhHHHHHHHc--CCCchhhhhhhhcCCC
Q 022605 186 NPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERIN-AFTHELTIVEKA--RHPNVVQFVGAVTQNI 258 (294)
Q Consensus 186 ~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~t~l~~a~~~--~~~~iv~~L~~~~~~~ 258 (294)
..+ .+++..+..|.||||+|+..++.+++++|++.|+.....+. .|.||+|+|+.. ++.+++++|++.+++.
T Consensus 450 s~G-ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 450 KYM-DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred hcc-cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 655 67888899999999999999999999999999988777775 589999999984 7899999999988764
No 43
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=1.2e-25 Score=199.20 Aligned_cols=190 Identities=13% Similarity=-0.060 Sum_probs=164.3
Q ss_pred CHHH-HHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC------CCCCCCCCHHHHHHH--cCCHHHH
Q 022605 84 DVKG-VEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANID------ARDRWGSTAAADAKY--YGNVEVY 154 (294)
Q Consensus 84 ~~~~-v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~------~~~~~g~t~L~~A~~--~g~~~~v 154 (294)
-+++ -++++.+|+++|..+.+| +|+..+..|++++|+++|++++ ..+..++|+||+++. .|+.++|
T Consensus 60 ~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV 134 (437)
T PHA02795 60 PVDVLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIV 134 (437)
T ss_pred HHHHHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHH
Confidence 3444 378999999999988877 9999999999999999999998 788899999999999 8999999
Q ss_pred HHHHHCCCCCCCC-CCCCccccCC---CCCcccccCcchhhhhcc-----cCCCCCceeeeeecCchhhhHhhhccCCCC
Q 022605 155 NILKARGAKVPKT-KRTPMTVANP---REVPEYELNPLELQVRKA-----DGITKGSYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 155 ~~Ll~~ga~~~~~-~~t~l~~a~~---~~~~~~l~~~~~~~~~~~-----~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
++|+++||+++.. +.||+|.|+. .+++++|+..+....+.. +..+.+++|.|+..++.+++++|++.|++.
T Consensus 135 ~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI 214 (437)
T PHA02795 135 DFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI 214 (437)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc
Confidence 9999999999874 7899999975 477889988773222222 123568899999999999999999999888
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
...+..|.||||+|+..|+.+++++|...+++. ...+..|.||||+|+.+|+.
T Consensus 215 N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI--------N~~d~~G~TpLh~Aa~~g~~ 267 (437)
T PHA02795 215 NQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV--------NAVMSNGYTCLDVAVDRGSV 267 (437)
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--------CCcCCCCCCHHHHHHHcCCc
Confidence 888889999999999999999999999999874 45677899999999999864
No 44
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=1.4e-25 Score=205.78 Aligned_cols=225 Identities=11% Similarity=-0.028 Sum_probs=156.1
Q ss_pred CCCCccccCCCCCCCCCCCCCCCchhHHHHHHH-cCCHHHHHHHHhcCCCCC----------------------------
Q 022605 49 QSSLDPIRRSPVQDELTVPENLDSTMQLLFMAC-RGDVKGVEDLLNEGSDVN---------------------------- 99 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~~~---------------------------- 99 (294)
.++.+.++.++..+...+..+.++.||||+|+. .++.|+|++||++|+|++
T Consensus 82 n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (631)
T PHA02792 82 NIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDD 161 (631)
T ss_pred cccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccc
Confidence 456677777777777777777777888888865 578888888888887632
Q ss_pred --------CCCCCCCcHHHHHHHcC-------cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHCCC
Q 022605 100 --------SIDLDGRTALHIAACEG-------HVEVVKLLLSKKANIDARDRWGSTAAADAKYYG--NVEVYNILKARGA 162 (294)
Q Consensus 100 --------~~~~~g~TpLh~A~~~g-------~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga 162 (294)
..|..|.||||+|+..+ +.|++++|+++|++++..|..|.||||+|+... ..+++++|++..-
T Consensus 162 ~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~ 241 (631)
T PHA02792 162 YDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNY 241 (631)
T ss_pred cccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccc
Confidence 23345778888888877 788888888888888888888888888888776 5566666654211
Q ss_pred C----------------------CCCC-------CCCC------------------------------------------
Q 022605 163 K----------------------VPKT-------KRTP------------------------------------------ 171 (294)
Q Consensus 163 ~----------------------~~~~-------~~t~------------------------------------------ 171 (294)
+ +|.. |.+|
T Consensus 242 ~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~i 321 (631)
T PHA02792 242 SGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYI 321 (631)
T ss_pred cccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccH
Confidence 0 0000 2221
Q ss_pred ---------------------ccccCC---CCCcccccCcchhhhhcccCC--CCCceeeeeecCch---hhhHhhhccC
Q 022605 172 ---------------------MTVANP---REVPEYELNPLELQVRKADGI--TKGSYQVAKWNGTK---VWVKILDKES 222 (294)
Q Consensus 172 ---------------------l~~a~~---~~~~~~l~~~~~~~~~~~~~~--~~t~l~~A~~~g~~---~~v~~Ll~~~ 222 (294)
++.|+. .+++++|+..+ ++++..+.. +.||||.|+..... +++++|++.|
T Consensus 322 eiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G 400 (631)
T PHA02792 322 NVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNG-NVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI 400 (631)
T ss_pred HHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcC-CchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC
Confidence 111111 12334455443 344444444 46888887766554 3578888888
Q ss_pred CCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccc
Q 022605 223 HKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSF 282 (294)
Q Consensus 223 ~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~ 282 (294)
++....+..|.||||+|+..++.+++++|...+++ ....+..|.|||++|+.
T Consensus 401 ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GAD--------IN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 401 DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGAD--------INITTKYGSTCIGICVI 452 (631)
T ss_pred CccccccccCcchHHHHHHcCCHHHHHHHHHCCCC--------CCCcCCCCCCHHHHHHH
Confidence 88878888899999999999999999999998876 45578889999999975
No 45
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91 E-value=1e-24 Score=212.57 Aligned_cols=169 Identities=16% Similarity=0.115 Sum_probs=146.2
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
+.....++.++..++.+.++.++..+...+..|..|.||||+||..|+.++|++|+++|+++|.+|.+|.||||+|+..|
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g 602 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAK 602 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhC
Confidence 34456778888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchh
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLEL 190 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~ 190 (294)
+.+++++|++.++..+. ..+.++||.|+..|+.+++++|+++|+++|.. |+||||+|+.. +++++|+..+ .
T Consensus 603 ~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G-A 679 (823)
T PLN03192 603 HHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNG-A 679 (823)
T ss_pred CHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcC-C
Confidence 99999999998876553 45779999999999999999999999998654 99999999765 5677888765 5
Q ss_pred hhhcccCCC-CCceeeeee
Q 022605 191 QVRKADGIT-KGSYQVAKW 208 (294)
Q Consensus 191 ~~~~~~~~~-~t~l~~A~~ 208 (294)
+++..+..+ .+|+..+..
T Consensus 680 dv~~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 680 DVDKANTDDDFSPTELREL 698 (823)
T ss_pred CCCCCCCCCCCCHHHHHHH
Confidence 666666666 677655533
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=1e-24 Score=182.81 Aligned_cols=162 Identities=24% Similarity=0.222 Sum_probs=144.2
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHc-----CcHHHHHHHHhCCCCCCCCC-CC
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLNEG-SDVNSIDLDGRTALHIAACE-----GHVEVVKLLLSKKANIDARD-RW 137 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~~~~g~TpLh~A~~~-----g~~~~v~~Ll~~gad~~~~~-~~ 137 (294)
.+..|.+|+|+||||+..+++++|+.||+.| +++|..+.-|+||+++|+.. .+.++|..|.+.| |||++- ..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 4557889999999999999999999999999 79999999999999999864 5778999999987 888875 57
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHh
Q 022605 138 GSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKI 217 (294)
Q Consensus 138 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~ 217 (294)
|+|+|++|+.+|+.++|+.||..|+|+|.+ |..|.|+|++|+.+|+.|+|++
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQ----------------------------DdDGSTALMCA~EHGhkEivkl 391 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQ----------------------------DDDGSTALMCAAEHGHKEIVKL 391 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccc----------------------------cCCccHHHhhhhhhChHHHHHH
Confidence 999999999999999999999999998665 7789999999999999999999
Q ss_pred hhccCCCCh-HhhhhhhhHHHHHHHcCCCchhhhhhhhc
Q 022605 218 LDKESHKDP-ERINAFTHELTIVEKARHPNVVQFVGAVT 255 (294)
Q Consensus 218 Ll~~~~~~~-~~~~~~~t~l~~a~~~~~~~iv~~L~~~~ 255 (294)
|+....++. -.+.+|.|+|.+|...||.+|.-+|.+..
T Consensus 392 LLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 392 LLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred HhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 996655554 45568999999999999999999996653
No 47
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.90 E-value=8e-25 Score=191.93 Aligned_cols=228 Identities=18% Similarity=0.152 Sum_probs=128.2
Q ss_pred ccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHH
Q 022605 44 FSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKL 123 (294)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~ 123 (294)
..++.++..+.+..++..+...+..+.+|.|+||.+|...+.+||++|+++|++||..|..||||||.|+..||+.++++
T Consensus 45 l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~ 124 (527)
T KOG0505|consen 45 LEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEY 124 (527)
T ss_pred HhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHH
Confidence 34444444455544444444444445555555555555555555555555555555555555555555555555555555
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCc
Q 022605 124 LLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA-RGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGS 202 (294)
Q Consensus 124 Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~ 202 (294)
|+++||++-..+..|..|+.+|...-..+++..-.. .|++++....-+... -..++..++ ..+ ...+.....|.|.
T Consensus 125 li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~-ml~D~~q~l-~~G-~~~d~~~~rG~T~ 201 (527)
T KOG0505|consen 125 LIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQT-MLDDARQWL-NAG-AELDARHARGATA 201 (527)
T ss_pred HHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHH-HHHHHHHHH-hcc-ccccccccccchH
Confidence 555555555555555555444443333333222221 122211100000000 000011111 112 2223333448899
Q ss_pred eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccc
Q 022605 203 YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSF 282 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~ 282 (294)
||+|+.+|..++.++|++.+......+.+|+||+|.|+..|+.++.++|...+.+ .......|.|||-.|..
T Consensus 202 lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~--------~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 202 LHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD--------MDAKTKMGETPLDVADE 273 (527)
T ss_pred HHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc--------cchhhhcCCCCccchhh
Confidence 9999999999999999999999999999999999999999999999999888876 33455666777776643
No 48
>PHA02741 hypothetical protein; Provisional
Probab=99.90 E-value=1.2e-23 Score=167.53 Aligned_cols=129 Identities=20% Similarity=0.199 Sum_probs=113.5
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHh------cCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCCCCCCC
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLN------EGSDVNSIDLDGRTALHIAACEGH----VEVVKLLLSKKANIDARD 135 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~------~g~~~~~~~~~g~TpLh~A~~~g~----~~~v~~Ll~~gad~~~~~ 135 (294)
...+..|.||||+||..|+.++|++|+. .|++++.+|..|+||||+|+..|+ .+++++|+++|++++.++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 3457789999999999999999999854 368899999999999999999999 589999999999999998
Q ss_pred C-CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchh
Q 022605 136 R-WGSTAAADAKYYGNVEVYNILKA-RGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKV 213 (294)
Q Consensus 136 ~-~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~ 213 (294)
. .|+||||+|+..++.+++++|++ .|++++. .+..|.||||.|+..|+.+
T Consensus 95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~----------------------------~n~~g~tpL~~A~~~~~~~ 146 (169)
T PHA02741 95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF----------------------------CNADNKSPFELAIDNEDVA 146 (169)
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc----------------------------CCCCCCCHHHHHHHCCCHH
Confidence 5 89999999999999999999997 4777643 2456788999999999999
Q ss_pred hhHhhhccC
Q 022605 214 WVKILDKES 222 (294)
Q Consensus 214 ~v~~Ll~~~ 222 (294)
++++|++.+
T Consensus 147 iv~~L~~~~ 155 (169)
T PHA02741 147 MMQILREIV 155 (169)
T ss_pred HHHHHHHHH
Confidence 999998654
No 49
>PHA02792 ankyrin-like protein; Provisional
Probab=99.90 E-value=6.3e-24 Score=194.95 Aligned_cols=218 Identities=14% Similarity=0.077 Sum_probs=165.3
Q ss_pred CCCCCCCCCchhHHHHHHH-cCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH-cCcHHHHHHHHhCCCCCC--------
Q 022605 63 ELTVPENLDSTMQLLFMAC-RGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC-EGHVEVVKLLLSKKANID-------- 132 (294)
Q Consensus 63 ~~~~~~~~~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~-~g~~~~v~~Ll~~gad~~-------- 132 (294)
......+.+|.+++|+-|. +|++|+|++|+++|+|+|.++..|.||+|+|+. .++.|++++|+++|||++
T Consensus 62 ~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~ 141 (631)
T PHA02792 62 SSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYK 141 (631)
T ss_pred hCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcc
Confidence 3445677788889977666 789999999999999999999999999999965 799999999999999842
Q ss_pred ----------------------------CCCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCC---CCCCCCCccc
Q 022605 133 ----------------------------ARDRWGSTAAADAKYYG-------NVEVYNILKARGAKV---PKTKRTPMTV 174 (294)
Q Consensus 133 ----------------------------~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~---~~~~~t~l~~ 174 (294)
..|..|.||||+|+..+ +.+++++|+++|+++ +..|.||||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~ 221 (631)
T PHA02792 142 IIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYY 221 (631)
T ss_pred hhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHH
Confidence 23557999999999999 899999999999998 4459999999
Q ss_pred cCCC-----CCcccccCc-------------------------------------c------------------------
Q 022605 175 ANPR-----EVPEYELNP-------------------------------------L------------------------ 188 (294)
Q Consensus 175 a~~~-----~~~~~l~~~-------------------------------------~------------------------ 188 (294)
|... +++++|+.. .
T Consensus 222 ~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~ 301 (631)
T PHA02792 222 YVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKR 301 (631)
T ss_pred HHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHH
Confidence 8332 222111100 0
Q ss_pred -----------------------hhhhhcccC----CCCCceeeeeecCchhhhHhhhccCCCChHhhhhh--hhHHHHH
Q 022605 189 -----------------------ELQVRKADG----ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAF--THELTIV 239 (294)
Q Consensus 189 -----------------------~~~~~~~~~----~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~t~l~~a 239 (294)
++.++.+.. ....+++.|+..|+.++|++|++.|+.....++.| .||+|+|
T Consensus 302 ~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A 381 (631)
T PHA02792 302 YTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPT 381 (631)
T ss_pred HhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHH
Confidence 000111110 12234677888999999999999988776666554 5999987
Q ss_pred HHcCCCc---hhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccccc
Q 022605 240 EKARHPN---VVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 240 ~~~~~~~---iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
......+ ++++|...+++ ...++..|.||||.|+.+++..+
T Consensus 382 ~~n~~~~v~~IlklLIs~GAD--------IN~kD~~G~TPLh~Aa~~~n~ei 425 (631)
T PHA02792 382 LSIHESDVLSILKLCKPYIDD--------INKIDKHGRSILYYCIESHSVSL 425 (631)
T ss_pred HHhccHhHHHHHHHHHhcCCc--------cccccccCcchHHHHHHcCCHHH
Confidence 7766554 57777777875 45578889999999999887654
No 50
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.90 E-value=2.3e-23 Score=165.24 Aligned_cols=134 Identities=19% Similarity=0.225 Sum_probs=95.0
Q ss_pred CCCCchhHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH---HHHHHhCCCCCCCCC-CCCC
Q 022605 68 ENLDSTMQLLFMACRGDV----KGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEV---VKLLLSKKANIDARD-RWGS 139 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~----~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~---v~~Ll~~gad~~~~~-~~g~ 139 (294)
.+.++.++||.||..|+. +++++|++.|++++.+|..|+||||+|+..|+.++ +++|+++|++++.++ ..|.
T Consensus 16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~ 95 (166)
T PHA02743 16 IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGN 95 (166)
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 344566778888888777 55556677777777777778888888887776543 677888888888777 4788
Q ss_pred CHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhh
Q 022605 140 TAAADAKYYGNVEVYNILKA-RGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKIL 218 (294)
Q Consensus 140 t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L 218 (294)
||||+|+..++.+++++|++ .|++++. .+..|.||||+|+..|+.+++++|
T Consensus 96 TpLh~A~~~g~~~iv~~Ll~~~gad~~~----------------------------~d~~g~tpL~~A~~~~~~~iv~~L 147 (166)
T PHA02743 96 TLLHIAASTKNYELAEWLCRQLGVNLGA----------------------------INYQHETAYHIAYKMRDRRMMEIL 147 (166)
T ss_pred cHHHHHHHhCCHHHHHHHHhccCCCccC----------------------------cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 88888888888888888874 5666532 245667777777777777777777
Q ss_pred hccCCCChHhh
Q 022605 219 DKESHKDPERI 229 (294)
Q Consensus 219 l~~~~~~~~~~ 229 (294)
++.+++.....
T Consensus 148 l~~ga~~~~~~ 158 (166)
T PHA02743 148 RANGAVCDDPL 158 (166)
T ss_pred HHcCCCCCCcc
Confidence 77666554433
No 51
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.89 E-value=5.3e-23 Score=175.73 Aligned_cols=148 Identities=16% Similarity=0.038 Sum_probs=115.9
Q ss_pred CCCCCch-hHHHHHHHcCCHHHHHHHHhcCCCCCCCC----CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCC
Q 022605 67 PENLDST-MQLLFMACRGDVKGVEDLLNEGSDVNSID----LDGRTALHIAACEGHVEVVKLLLSKKANIDAR-DRWGST 140 (294)
Q Consensus 67 ~~~~~g~-t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~----~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~-~~~g~t 140 (294)
..|..+. ++||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..++.+++++|+++|||+|.. +..|.|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T 106 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence 3445555 46677777899999999999999999874 58999999999999999999999999999986 468999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhh
Q 022605 141 AAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVW 214 (294)
Q Consensus 141 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~ 214 (294)
|||+|+..++.+++++|++.|++++.. |.||||+|+.. .....+.. ...+..+.+|.+.+ ++.++
T Consensus 107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD------NEISNFYKHPKKIL---INFDI 177 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC------CcccccccChhhhh---ccHHH
Confidence 999999999999999999999998654 88888888543 22222211 11344455666654 46788
Q ss_pred hHhhhccCC
Q 022605 215 VKILDKESH 223 (294)
Q Consensus 215 v~~Ll~~~~ 223 (294)
+++|++.+.
T Consensus 178 ~~~Lish~v 186 (300)
T PHA02884 178 LKILVSHFI 186 (300)
T ss_pred HHHHHHHHH
Confidence 888886653
No 52
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89 E-value=1.7e-23 Score=202.76 Aligned_cols=231 Identities=16% Similarity=0.055 Sum_probs=166.2
Q ss_pred CCccccccCCCCCccccCCCCC--CCCCCCCCCCchhHHH-HHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc-
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQ--DELTVPENLDSTMQLL-FMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE- 115 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~t~L~-~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~- 115 (294)
...++.++..|+.+.++.++.. +...+..|..|.|||| .|+.+++.+++++|+++|+ .+..|.||||.|+..
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~ 93 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEY 93 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhcc
Confidence 3455678888999999888877 5566677889999999 8888889999999999987 577899999999872
Q ss_pred --CcHHHHHHHHhCCCC------CC----CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCccc
Q 022605 116 --GHVEVVKLLLSKKAN------ID----ARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEY 183 (294)
Q Consensus 116 --g~~~~v~~Ll~~gad------~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~ 183 (294)
+...++.++.+.+.+ ++ ..+..|.||||+|+..|+.++|++|+++|++++....... +
T Consensus 94 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~----------~ 163 (743)
T TIGR00870 94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDF----------F 163 (743)
T ss_pred HHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCch----------h
Confidence 222344444444422 11 1235699999999999999999999999999985411110 0
Q ss_pred ccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC---------CCchhhhhhhh
Q 022605 184 ELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR---------HPNVVQFVGAV 254 (294)
Q Consensus 184 l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~---------~~~iv~~L~~~ 254 (294)
.. .........|.||||.|+..|+.+++++|++.+++....+..|+||+|+|+..+ ...+.+++...
T Consensus 164 ~~----~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~l 239 (743)
T TIGR00870 164 VK----SQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSL 239 (743)
T ss_pred hc----CCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 00 000122345789999999999999999999999888888889999999999986 23355555544
Q ss_pred cCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 255 TQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 255 ~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
.+...-..-.+ ...+..|.||||+|+.+++..++
T Consensus 240 l~~~~~~~el~-~i~N~~g~TPL~~A~~~g~~~l~ 273 (743)
T TIGR00870 240 LDKLRDSKELE-VILNHQGLTPLKLAAKEGRIVLF 273 (743)
T ss_pred HhccCChHhhh-hhcCCCCCCchhhhhhcCCccHH
Confidence 43321100000 22456788999999999987654
No 53
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89 E-value=1.5e-23 Score=190.09 Aligned_cols=191 Identities=21% Similarity=0.154 Sum_probs=161.7
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 144 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~ 144 (294)
.+..|.+|.|+||.|+.+|+.+++++|+++.+-++..|..|.+|||+|++.|+.++|++|+.++..+|..+..|.||||.
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHL 121 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccch
Confidence 34567799999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCC---CCCCCCCccccCCC---CCcccccCcchhh--------hhcccCCCCCceeeeeecC
Q 022605 145 AKYYGNVEVYNILKARGAKV---PKTKRTPMTVANPR---EVPEYELNPLELQ--------VRKADGITKGSYQVAKWNG 210 (294)
Q Consensus 145 A~~~g~~~~v~~Ll~~ga~~---~~~~~t~l~~a~~~---~~~~~l~~~~~~~--------~~~~~~~~~t~l~~A~~~g 210 (294)
|++.||.+++.+|+++|+++ |..+.|++.+|++. ++++.|+.. ++. -....-.+.+|||.|+++|
T Consensus 122 aaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHlaakng 200 (854)
T KOG0507|consen 122 AAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNG 200 (854)
T ss_pred hhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchhhhcc
Confidence 99999999999999999986 55699999999764 445554433 111 1122233468999999999
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
+.++++.|+..|-+.+ ...+..|++|.|+-.|..++|.+|+..+-+
T Consensus 201 h~~~~~~ll~ag~din-~~t~~gtalheaalcgk~evvr~ll~~gin 246 (854)
T KOG0507|consen 201 HVECMQALLEAGFDIN-YTTEDGTALHEAALCGKAEVVRFLLEIGIN 246 (854)
T ss_pred hHHHHHHHHhcCCCcc-cccccchhhhhHhhcCcchhhhHHHhhccc
Confidence 9999999997775544 444556999999999999999999887765
No 54
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.89 E-value=2.1e-23 Score=158.13 Aligned_cols=104 Identities=36% Similarity=0.418 Sum_probs=94.3
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSD-VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
..-.+.+|+..+.+..|+.||+..++ +|.+|.+|+||||-|+++||++||+.|+..||+++++...||||||-||..++
T Consensus 63 p~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 63 PIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 34568999999999999999998876 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC---CCCCcccc
Q 022605 151 VEVYNILKARGAKVPKT---KRTPMTVA 175 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~---~~t~l~~a 175 (294)
.+++.+||++|+|+|.. .+||||+|
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhla 170 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLA 170 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHh
Confidence 99999999999999765 34444444
No 55
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89 E-value=6.5e-23 Score=162.60 Aligned_cols=132 Identities=23% Similarity=0.206 Sum_probs=114.5
Q ss_pred CCCCCCccccccCCCCCcccc----CCCCCCCCCCCCCCCchhHHHHHHHcCCHHH---HHHHHhcCCCCCCCC-CCCCc
Q 022605 36 DPRRNNMRFSFGRQSSLDPIR----RSPVQDELTVPENLDSTMQLLFMACRGDVKG---VEDLLNEGSDVNSID-LDGRT 107 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~---v~~Ll~~g~~~~~~~-~~g~T 107 (294)
+.+....++.+++.++...+. .+...+......+..|+||||+|+..|+.+. +++|+++|+++|.++ ..|.|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~T 96 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNT 96 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCc
Confidence 345566778888888874433 4455566667778899999999999988654 899999999999998 58999
Q ss_pred HHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 022605 108 ALHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT 167 (294)
Q Consensus 108 pLh~A~~~g~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 167 (294)
|||+|+..|+.+++++|++ .|++++.++..|+||||+|+..++.+++++|+++|++++..
T Consensus 97 pLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 157 (166)
T PHA02743 97 LLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP 157 (166)
T ss_pred HHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999995 79999999999999999999999999999999999998655
No 56
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=7.8e-23 Score=160.40 Aligned_cols=136 Identities=22% Similarity=0.285 Sum_probs=106.5
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCC--C-----CCCCCCCCCcHHHHHHHcCcH---HHHHHHHhCC
Q 022605 59 PVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGS--D-----VNSIDLDGRTALHIAACEGHV---EVVKLLLSKK 128 (294)
Q Consensus 59 ~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~-----~~~~~~~g~TpLh~A~~~g~~---~~v~~Ll~~g 128 (294)
++........|..|.||||+||..|+. +.+++..+. + ++.+|..|.||||+|+..|+. +++++|+++|
T Consensus 4 ~~~~~~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g 81 (154)
T PHA02736 4 PEEIIFASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG 81 (154)
T ss_pred cchhhHHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC
Confidence 344445566778899999999999984 333333222 2 335688899999999999887 4688999999
Q ss_pred CCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeee
Q 022605 129 ANIDARD-RWGSTAAADAKYYGNVEVYNILKAR-GAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVA 206 (294)
Q Consensus 129 ad~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A 206 (294)
++++.++ ..|+||||+|+..++.+++++|++. |++++. .+..|.||||+|
T Consensus 82 adin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~----------------------------~~~~g~tpL~~A 133 (154)
T PHA02736 82 ADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI----------------------------LNYAFKTPYYVA 133 (154)
T ss_pred CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc----------------------------ccCCCCCHHHHH
Confidence 9999998 4899999999999999999999974 776533 356788899999
Q ss_pred eecCchhhhHhhhccCCC
Q 022605 207 KWNGTKVWVKILDKESHK 224 (294)
Q Consensus 207 ~~~g~~~~v~~Ll~~~~~ 224 (294)
+..|+.+++++|+..++.
T Consensus 134 ~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 134 CERHDAKMMNILRAKGAQ 151 (154)
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 999999999999877754
No 57
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.86 E-value=8e-23 Score=160.63 Aligned_cols=203 Identities=17% Similarity=0.122 Sum_probs=172.6
Q ss_pred ccCCCCCccccC-CCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 022605 46 FGRQSSLDPIRR-SPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124 (294)
Q Consensus 46 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~L 124 (294)
..++++.+..+. .......+...+.+|+.+++.|+-.|+...+..+|.+|+..|..+-.+++|+.+++...+++++..+
T Consensus 69 ~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~ 148 (296)
T KOG0502|consen 69 AVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLL 148 (296)
T ss_pred hhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHH
Confidence 344555544333 3334455667778899999999999999999999999999999999999999999999999999888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCcee
Q 022605 125 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQ 204 (294)
Q Consensus 125 l~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~ 204 (294)
.++ .+|..|..|.|||.||+..|+..+|++|++.|++++.- .....++|.
T Consensus 149 ~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l----------------------------gk~resALs 198 (296)
T KOG0502|consen 149 VNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL----------------------------GKYRESALS 198 (296)
T ss_pred hhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhh----------------------------hhhhhhhHh
Confidence 876 57899999999999999999999999999999998553 223457899
Q ss_pred eeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 205 VAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 205 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
+|+..|..++|++|+.++.+.+..+.+|.|||-+|++.+|..+++.|+..+++. .-..+.|.+++.+|...|
T Consensus 199 LAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~--------t~e~dsGy~~mdlAValG 270 (296)
T KOG0502|consen 199 LATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADV--------TQEDDSGYWIMDLAVALG 270 (296)
T ss_pred HHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCc--------ccccccCCcHHHHHHHhh
Confidence 999999999999999998888888889999999999999999999999999874 334677788888887766
Q ss_pred cc
Q 022605 285 QT 286 (294)
Q Consensus 285 ~~ 286 (294)
.-
T Consensus 271 yr 272 (296)
T KOG0502|consen 271 YR 272 (296)
T ss_pred hH
Confidence 54
No 58
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.86 E-value=4.6e-21 Score=136.08 Aligned_cols=88 Identities=41% Similarity=0.571 Sum_probs=82.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 022605 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYN 155 (294)
Q Consensus 76 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~ 155 (294)
||+||..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999999999999988876 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCC
Q 022605 156 ILKARGAKVPKT 167 (294)
Q Consensus 156 ~Ll~~ga~~~~~ 167 (294)
+|+++|++++.+
T Consensus 77 ~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 77 LLLEHGADVNIR 88 (89)
T ss_dssp HHHHTTT-TTSS
T ss_pred HHHHcCCCCCCc
Confidence 999999998764
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85 E-value=6.5e-22 Score=150.04 Aligned_cols=142 Identities=20% Similarity=0.191 Sum_probs=116.8
Q ss_pred ccccCCCCCccccCCCCCCCCC-CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q 022605 44 FSFGRQSSLDPIRRSPVQDELT-VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVK 122 (294)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~ 122 (294)
.-++..+.+..|++++...... +.+|.+|.||||.|+.+|++++|+.|+..|++++++...||||||-||.-++.+|+.
T Consensus 68 lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~ 147 (228)
T KOG0512|consen 68 LWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAG 147 (228)
T ss_pred HHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHH
Confidence 3345567778888887776554 678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHH-CCCCC---CCCCCCCccccCCCCCccccc
Q 022605 123 LLLSKKANIDARDRWGSTAAADAKYYGN-VEVYNILKA-RGAKV---PKTKRTPMTVANPREVPEYEL 185 (294)
Q Consensus 123 ~Ll~~gad~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~-~ga~~---~~~~~t~l~~a~~~~~~~~l~ 185 (294)
.|+++|+|||+.....+||||+|+...+ ...+.+|+. .++.+ +..+.||+.+|-+..+..+++
T Consensus 148 ~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~lf 215 (228)
T KOG0512|consen 148 RLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYLF 215 (228)
T ss_pred HHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHHH
Confidence 9999999999999999999999998765 456677764 34444 333667777776655555444
No 60
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.84 E-value=1.6e-21 Score=182.51 Aligned_cols=227 Identities=19% Similarity=0.176 Sum_probs=193.9
Q ss_pred cCCCCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCC-CCCCCcHH
Q 022605 31 RQSSFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSI-DLDGRTAL 109 (294)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~-~~~g~TpL 109 (294)
......++....+-.+++.+.-+.+..++..+......|..|.+||.+|+-.||..+|+.|+.+-+++++. |..+.|+|
T Consensus 749 id~~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~l 828 (2131)
T KOG4369|consen 749 IDPLTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTML 828 (2131)
T ss_pred eccccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceE
Confidence 33455666777777777778878888888888999999999999999999999999999999999999864 57899999
Q ss_pred HHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CCCCccccCCC---CCc
Q 022605 110 HIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT-----KRTPMTVANPR---EVP 181 (294)
Q Consensus 110 h~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-----~~t~l~~a~~~---~~~ 181 (294)
-+||..|..++|++||.+|++-..++-..+|||.+|...|+.++|+.|+..|+.+|.+ |..||.+|... ...
T Consensus 829 Slacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at 908 (2131)
T KOG4369|consen 829 SLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAAT 908 (2131)
T ss_pred EEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHH
Confidence 9999999999999999999999999999999999999999999999999999999766 88999999765 345
Q ss_pred ccccCcchhhhhcc-cCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 182 EYELNPLELQVRKA-DGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 182 ~~l~~~~~~~~~~~-~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
..++..+ .+++.. .....|+|-+|+..|+.++|.+||...+....+-+.|.|||+.++..|+.++-.+|+..+++.
T Consensus 909 ~~ll~~g-sdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~ 985 (2131)
T KOG4369|consen 909 LSLLQPG-SDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADT 985 (2131)
T ss_pred HHHhccc-chhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccccc
Confidence 5666655 233332 233468999999999999999999887777777788999999999999999999999988874
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.84 E-value=4.3e-21 Score=186.03 Aligned_cols=188 Identities=20% Similarity=0.138 Sum_probs=146.1
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCcHHH-HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNE--GSDVNSIDLDGRTALH-IAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~g~TpLh-~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
.+++.+|+.||..|+.+.|+.+++. +.++|..|..|+|||| .|+.+++.+++++|+++|+ .+..|.||||.|+
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~ 90 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS 90 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence 3578999999999999999999998 8999999999999999 8999999999999999987 6778999999998
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCCh
Q 022605 147 YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDP 226 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~ 226 (294)
. +..+.++.++....+....+..+ . +.. .........|.||||+|+.+|+.++|++|++.|++.+
T Consensus 91 ~-~~~~~v~~ll~~l~~~~~~~~~~-~----------~~~---~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~ 155 (743)
T TIGR00870 91 L-EYVDAVEAILLHLLAAFRKSGPL-E----------LAN---DQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP 155 (743)
T ss_pred h-ccHHHHHHHHHHHhhcccccCch-h----------hhc---cccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 7 33444444444332221111111 0 000 0011223468899999999999999999999887665
Q ss_pred Hhh--------------hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 227 ERI--------------NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 227 ~~~--------------~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
... ..|.+|++.|+..++++++++|...+++ ....++.|.||||+|+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad--------in~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 156 ARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD--------ILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred cCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc--------hhhHhhhhhHHHHHHHhhh
Confidence 321 3478999999999999999999888875 4556788999999999986
No 62
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84 E-value=4.9e-21 Score=163.68 Aligned_cols=149 Identities=15% Similarity=0.064 Sum_probs=126.2
Q ss_pred CCCCc-cccccCCCCCccccCCCCCCCCCCCC----CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHH
Q 022605 38 RRNNM-RFSFGRQSSLDPIRRSPVQDELTVPE----NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHI 111 (294)
Q Consensus 38 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~ 111 (294)
...+. ++.++..+..+.++.++..+...... +..|.||||+|+..|+.+++++|+++|+|+|.++ ..|.||||+
T Consensus 31 ~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~ 110 (300)
T PHA02884 31 ICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI 110 (300)
T ss_pred CCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence 33444 44555557788889999888877665 4589999999999999999999999999999864 679999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcc
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPL 188 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~ 188 (294)
|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++..+. |...+..+.+|.+++...+++++|+...
T Consensus 111 Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~n~ei~~~Lish~ 185 (300)
T PHA02884 111 SVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNEISNFYKHPKKILINFDILKILVSHF 185 (300)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCcccccccChhhhhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876654 5556677889998877677778777665
No 63
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=1.5e-21 Score=163.86 Aligned_cols=154 Identities=22% Similarity=0.178 Sum_probs=130.9
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcC-----CHHHHHHHHHCCCCCCCCCCCC
Q 022605 98 VNSIDLDGRTALHIAACEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKYYG-----NVEVYNILKARGAKVPKTKRTP 171 (294)
Q Consensus 98 ~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~~~~g~t~L~~A~~~g-----~~~~v~~Ll~~ga~~~~~~~t~ 171 (294)
||..|.+|.|+||||+..+++++|+.||+.| +|++..++-|+||+++++... +.++|.-|++.| ++
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nV------- 332 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DV------- 332 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Cc-------
Confidence 6888999999999999999999999999986 799999999999999988653 466777777654 22
Q ss_pred ccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhh
Q 022605 172 MTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251 (294)
Q Consensus 172 l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L 251 (294)
+.. ....|+|+|++|+.+|+.++|+.|+..+++.+..+++|.|+|+.|++.||.||+++|
T Consensus 333 -------------------NaK-AsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklL 392 (452)
T KOG0514|consen 333 -------------------NAK-ASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLL 392 (452)
T ss_pred -------------------chh-hhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHH
Confidence 221 134688999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 252 GAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 252 ~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
++...- +.--.+..|-|+|.+|-.+||-
T Consensus 393 LA~p~c-------d~sLtD~DgSTAl~IAleagh~ 420 (452)
T KOG0514|consen 393 LAVPSC-------DISLTDVDGSTALSIALEAGHR 420 (452)
T ss_pred hccCcc-------cceeecCCCchhhhhHHhcCch
Confidence 887653 3444567788999999998874
No 64
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-20 Score=150.15 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=112.6
Q ss_pred CCCCCCccccccCCCCCccccCCCC------CCCCCCCCCCCchhHHHHHHHcCC----HHHHHHHHhcCCCCCCCCC-C
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPV------QDELTVPENLDSTMQLLFMACRGD----VKGVEDLLNEGSDVNSIDL-D 104 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~t~L~~Aa~~g~----~~~v~~Ll~~g~~~~~~~~-~ 104 (294)
+..+.+.++.+++.++.+.++.++. .+......|..|.||||+|+..|+ .+++++|+++|+++|.++. .
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~ 97 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLE 97 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCC
Confidence 3456778888888898887776532 234456778899999999999999 5899999999999999985 8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 022605 105 GRTALHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 164 (294)
|+||||+|+..++.+++++|++ .|++++..|..|+||||+|+..++.+++++|++.++..
T Consensus 98 g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 98 GDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999998 59999999999999999999999999999999987653
No 65
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.82 E-value=5.8e-21 Score=173.49 Aligned_cols=215 Identities=20% Similarity=0.154 Sum_probs=178.4
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
+..-+.+++++-.+....++-+++......-.+..|.+|||+||..|+.++|+.|+.++..+|+.+..|.||||.|++.|
T Consensus 47 ~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhg 126 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHG 126 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhc
Confidence 35567778888889988888888887777777899999999999999999999999999889999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----------CCCCCCCccccCCCCCcc---
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV-----------PKTKRTPMTVANPREVPE--- 182 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-----------~~~~~t~l~~a~~~~~~~--- 182 (294)
|.++|.+|+++|+|+-.+|+.+.|+|.+|++.|..++|+.|++...++ +..+-+|||+|+.++.++
T Consensus 127 h~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~ 206 (854)
T KOG0507|consen 127 HLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQ 206 (854)
T ss_pred chHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHH
Confidence 999999999999999999999999999999999999999999874332 122789999999886554
Q ss_pred cccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC---CCchhhhhhh
Q 022605 183 YELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR---HPNVVQFVGA 253 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~---~~~iv~~L~~ 253 (294)
.|+..+ ++++.... ..|+||.|+..|..++|.+|++.|......+..|.|++++....- ..+|+-++..
T Consensus 207 ~ll~ag-~din~~t~-~gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~ 278 (854)
T KOG0507|consen 207 ALLEAG-FDINYTTE-DGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN 278 (854)
T ss_pred HHHhcC-CCcccccc-cchhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence 444433 44443333 347999999999999999999998877778888999998876653 3455555433
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82 E-value=4.6e-20 Score=144.67 Aligned_cols=130 Identities=20% Similarity=0.211 Sum_probs=105.6
Q ss_pred CCCCCCccccccCCCCCccccCC---CCC--CCCCCCCCCCchhHHHHHHHcCCH---HHHHHHHhcCCCCCCCC-CCCC
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRS---PVQ--DELTVPENLDSTMQLLFMACRGDV---KGVEDLLNEGSDVNSID-LDGR 106 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~g~t~L~~Aa~~g~~---~~v~~Ll~~g~~~~~~~-~~g~ 106 (294)
+..+.++++.+++.++...+..+ ... .......|..|.||||+|+..|+. +++++|+++|+++|.++ ..|.
T Consensus 14 d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~ 93 (154)
T PHA02736 14 DIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGN 93 (154)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCC
Confidence 44566666677777663222111 101 111234578899999999999987 46899999999999998 5899
Q ss_pred cHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q 022605 107 TALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVP 165 (294)
Q Consensus 107 TpLh~A~~~g~~~~v~~Ll~~-gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 165 (294)
||||+|+..|+.+++++|+++ |++++..|..|+||||+|+..|+.+++++|+++|++++
T Consensus 94 T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 94 TPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999984 99999999999999999999999999999999999875
No 67
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.80 E-value=7.9e-21 Score=177.95 Aligned_cols=208 Identities=23% Similarity=0.277 Sum_probs=176.9
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHH
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDA-RDRWGSTAAADAKY 147 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~~~~g~t~L~~A~~ 147 (294)
..+-.|+|-.||..|+-|.|++|+.+|+++..+|..|.+||.+|+..||..+|+.|+++.++++. .|+.+.|+|.+||.
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs 833 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS 833 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence 34567999999999999999999999999999999999999999999999999999999999986 47889999999999
Q ss_pred cCCHHHHHHHHHCCCCCCC---CCCCCccccCCC---CCcccccCcc-hhhhhcccCCCCCceeeeeecCchhhhHhhhc
Q 022605 148 YGNVEVYNILKARGAKVPK---TKRTPMTVANPR---EVPEYELNPL-ELQVRKADGITKGSYQVAKWNGTKVWVKILDK 220 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~---~~~t~l~~a~~~---~~~~~l~~~~-~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~ 220 (294)
.|..++|++||..|++-.. .+.|||.+|... +++..++..+ +++-......|-.||++|..+|+.+.++.|++
T Consensus 834 ggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 834 GGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred CCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhc
Confidence 9999999999999998643 489999999664 5666777766 46666777788899999999999999999998
Q ss_pred cCCCChHhh-hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccc
Q 022605 221 ESHKDPERI-NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 221 ~~~~~~~~~-~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
.+.+.+... -+.+|+|.+|+..|+.|+|.+|+...++. ..+..-|.|||+-++--|
T Consensus 914 ~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anv--------ehRaktgltplme~AsgG 970 (2131)
T KOG4369|consen 914 PGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANV--------EHRAKTGLTPLMEMASGG 970 (2131)
T ss_pred ccchhccccccccccceeeccccCcchHHHHHHHHhhhh--------hhhcccCCcccchhhcCC
Confidence 887655433 35679999999999999999999988763 224455666766665444
No 68
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4.5e-20 Score=150.81 Aligned_cols=150 Identities=21% Similarity=0.166 Sum_probs=122.1
Q ss_pred HHcCCHHHHHHHHh-cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 022605 80 ACRGDVKGVEDLLN-EGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 158 (294)
Q Consensus 80 a~~g~~~~v~~Ll~-~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 158 (294)
|+.|+.-.|++.++ ..-|.|.-|..|.+||||||..|+..+|+.|++.|+.+|..+....||||+|+.+||.++|..|+
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll 87 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLL 87 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHH
Confidence 45566555665554 35788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHH
Q 022605 159 ARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTI 238 (294)
Q Consensus 159 ~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~ 238 (294)
+..+|+|. .+..|.||||+||..|.-.+.+-|+..|+.....++.|.||++.
T Consensus 88 ~~kadvna----------------------------vnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldk 139 (448)
T KOG0195|consen 88 SRKADVNA----------------------------VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDK 139 (448)
T ss_pred HHhcccch----------------------------hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhh
Confidence 98887754 36678889999999999999999999998888888889999887
Q ss_pred HHHcCCCchhhhhhhhcCC
Q 022605 239 VEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~~~ 257 (294)
|.-.-..-+.+.-...+++
T Consensus 140 akp~l~~~l~e~aek~gq~ 158 (448)
T KOG0195|consen 140 AKPMLKNTLLEIAEKHGQS 158 (448)
T ss_pred hchHHHHHHHHHHHHhCCC
Confidence 6443333333333333444
No 69
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.78 E-value=3.3e-18 Score=128.29 Aligned_cols=124 Identities=40% Similarity=0.526 Sum_probs=108.7
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~ 147 (294)
.+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|+.
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 35679999999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhh
Q 022605 148 YGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILD 219 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll 219 (294)
.++.+++++|++.|.+++. .+..+.||++.|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~----------------------------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA----------------------------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc----------------------------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999998754422 2344557777777777777777764
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.78 E-value=3.7e-19 Score=156.58 Aligned_cols=194 Identities=22% Similarity=0.254 Sum_probs=151.1
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 022605 75 QLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVY 154 (294)
Q Consensus 75 ~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v 154 (294)
.+.-|+..|..+-|+.|+..|+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+..|+..++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~ 122 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV 122 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence 47778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCC---CCCCCCCccccCCCCCcccccC---cchhhhhcccCCC-CCceeeeeecCchhhhHhhhccCCCChH
Q 022605 155 NILKARGAKV---PKTKRTPMTVANPREVPEYELN---PLELQVRKADGIT-KGSYQVAKWNGTKVWVKILDKESHKDPE 227 (294)
Q Consensus 155 ~~Ll~~ga~~---~~~~~t~l~~a~~~~~~~~l~~---~~~~~~~~~~~~~-~t~l~~A~~~g~~~~v~~Ll~~~~~~~~ 227 (294)
++|+.+|+++ |..|..|+..+-......++.. ...++++..-... .+. -.++-.||. .|.....
T Consensus 123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~m--------l~D~~q~l~-~G~~~d~ 193 (527)
T KOG0505|consen 123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTM--------LDDARQWLN-AGAELDA 193 (527)
T ss_pred HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHH--------HHHHHHHHh-ccccccc
Confidence 9999999985 6779999988855433322221 1111111110000 010 123445555 5544444
Q ss_pred hhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccc
Q 022605 228 RINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQ 285 (294)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~ 285 (294)
....|.|.+|.|+.+|+.++..+|+.++.+. ..++..|.||||.|+.=++
T Consensus 194 ~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~--------~~~D~dgWtPlHAAA~Wg~ 243 (527)
T KOG0505|consen 194 RHARGATALHVAAANGYTEVAALLLQAGYSV--------NIKDYDGWTPLHAAAHWGQ 243 (527)
T ss_pred cccccchHHHHHHhhhHHHHHHHHHHhccCc--------ccccccCCCcccHHHHhhh
Confidence 3444899999999999999999999999874 4577889999999886554
No 71
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.74 E-value=3.2e-18 Score=116.49 Aligned_cols=93 Identities=32% Similarity=0.507 Sum_probs=86.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 153 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~ 153 (294)
.-+.|++.+|.++-|+..+..|.++|..- .|+||||+|+..|+.+++++|+..||+++.+|+.|-|||.-|+..||.++
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 45789999999999999999998888654 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCC
Q 022605 154 YNILKARGAKVPKT 167 (294)
Q Consensus 154 v~~Ll~~ga~~~~~ 167 (294)
|++|++.|++-...
T Consensus 83 VklLL~~GAdrt~~ 96 (117)
T KOG4214|consen 83 VKLLLQNGADRTIH 96 (117)
T ss_pred HHHHHHcCccccee
Confidence 99999999997544
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.72 E-value=6.2e-18 Score=119.89 Aligned_cols=87 Identities=32% Similarity=0.443 Sum_probs=72.5
Q ss_pred cccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 022605 45 SFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLL 124 (294)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~L 124 (294)
.++..++.+.++.++........ |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 3 ~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 78 (89)
T PF12796_consen 3 IAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLL 78 (89)
T ss_dssp HHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44556666777776664433333 88999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCC
Q 022605 125 LSKKANIDARD 135 (294)
Q Consensus 125 l~~gad~~~~~ 135 (294)
+++|++++.+|
T Consensus 79 l~~g~~~~~~n 89 (89)
T PF12796_consen 79 LEHGADVNIRN 89 (89)
T ss_dssp HHTTT-TTSS-
T ss_pred HHcCCCCCCcC
Confidence 99999999875
No 73
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.69 E-value=4.7e-16 Score=128.70 Aligned_cols=129 Identities=35% Similarity=0.426 Sum_probs=115.7
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc-----HHHHHHHHhCCC---CCCCCCCC
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH-----VEVVKLLLSKKA---NIDARDRW 137 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~-----~~~v~~Ll~~ga---d~~~~~~~ 137 (294)
...+..+.+++|.++..+..+++.++++.|++++.++..|.||||+|+..++ .+++++|++.|+ +.+..|..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 3455668899999999999999999999999999999999999999999999 999999999999 56666999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHh
Q 022605 138 GSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKI 217 (294)
Q Consensus 138 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~ 217 (294)
|.||||+|+..|+.+++++|++.|++++.. +..|.|+++.|+..++.++++.
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~----------------------------~~~g~t~l~~a~~~~~~~~~~~ 198 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADPNSR----------------------------NSYGVTALDPAAKNGRIELVKL 198 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCCccc----------------------------ccCCCcchhhhcccchHHHHHH
Confidence 999999999999999999999998887543 6677888888888888888888
Q ss_pred hhccC
Q 022605 218 LDKES 222 (294)
Q Consensus 218 Ll~~~ 222 (294)
++..+
T Consensus 199 l~~~~ 203 (235)
T COG0666 199 LLDKG 203 (235)
T ss_pred HHhcC
Confidence 88654
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.68 E-value=5.2e-17 Score=149.54 Aligned_cols=112 Identities=29% Similarity=0.318 Sum_probs=99.2
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-----------------------CCCCcHHHHHHHcCcHHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-----------------------LDGRTALHIAACEGHVEVVKLL 124 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-----------------------~~g~TpLh~A~~~g~~~~v~~L 124 (294)
....|.||||+|+.+.+.++|++|++.||||+++. ..|..||-+||+.++.||+++|
T Consensus 180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 44679999999999999999999999999998652 1467899999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCccccCCCC
Q 022605 125 LSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK-----VPKTKRTPMTVANPRE 179 (294)
Q Consensus 125 l~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~t~l~~a~~~~ 179 (294)
+++|||++++|..|+|.||..+..-..+|.++++++|++ +|.+|-|||.+|+..+
T Consensus 260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhh
Confidence 999999999999999999999999999999999999998 2555777777776543
No 75
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.67 E-value=4.3e-16 Score=148.45 Aligned_cols=102 Identities=37% Similarity=0.487 Sum_probs=93.5
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 153 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~ 153 (294)
+.|+.||..|+.++|+.|+++|+++|.+|..|.||||+||..|+.+++++|+++|+|++..|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHC-------CCCCCCC---CCCCcccc
Q 022605 154 YNILKAR-------GAKVPKT---KRTPMTVA 175 (294)
Q Consensus 154 v~~Ll~~-------ga~~~~~---~~t~l~~a 175 (294)
+++|+++ |++++.. |.+|+..+
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 9999998 6665433 66665544
No 76
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.67 E-value=8.5e-17 Score=148.16 Aligned_cols=186 Identities=19% Similarity=0.154 Sum_probs=135.4
Q ss_pred CccccccCCCCCccccCCCCCCC--------CC-CCCCCCchhHHHHHHHc---CCHHHHHHHHhcCCC-CC---C-CCC
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDE--------LT-VPENLDSTMQLLFMACR---GDVKGVEDLLNEGSD-VN---S-IDL 103 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~-~~---~-~~~ 103 (294)
...+....++..+....+..... +. ......|.|.||.|..+ ++.++++.|++.-.. +| . -..
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 45566666666666655555442 22 33467899999999984 567899999985321 22 1 126
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC---------C--------------CCCCCHHHHHHHcCCHHHHHHHHHC
Q 022605 104 DGRTALHIAACEGHVEVVKLLLSKKANIDAR---------D--------------RWGSTAAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 104 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~---------~--------------~~g~t~L~~A~~~g~~~~v~~Ll~~ 160 (294)
.|+||||+|+.+.+.++|++|++.||||+++ | ..|..||.+|+-.++.+++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 7999999999999999999999999999753 1 2578899999999999999999999
Q ss_pred CCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC--ChHhhhhhhhHHHH
Q 022605 161 GAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK--DPERINAFTHELTI 238 (294)
Q Consensus 161 ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~t~l~~ 238 (294)
|||++.+ |..|+|.||..+..-..++-+++++.++. ....++.|-|||..
T Consensus 263 gAd~~aq----------------------------DS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtL 314 (782)
T KOG3676|consen 263 GADPNAQ----------------------------DSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTL 314 (782)
T ss_pred CCCCCcc----------------------------ccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHH
Confidence 9998655 55566666666666566666666666655 44455566677777
Q ss_pred HHHcCCCchhhhhhhh
Q 022605 239 VEKARHPNVVQFVGAV 254 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~ 254 (294)
|++.|+.+|.+.+.+.
T Consensus 315 AaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 315 AAKLGKKEMFQHILER 330 (782)
T ss_pred HHHhhhHHHHHHHHHh
Confidence 7777777766666655
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.66 E-value=9.1e-17 Score=103.16 Aligned_cols=55 Identities=49% Similarity=0.613 Sum_probs=33.1
Q ss_pred HHhcC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 91 LLNEG-SDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 91 Ll~~g-~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
||++| +++|.+|..|.||||+||..|+.++|++|++.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 67888 89999999999999999999999999999999999999999999999987
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.64 E-value=1e-15 Score=114.70 Aligned_cols=122 Identities=31% Similarity=0.383 Sum_probs=112.2
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
..+.++++.+...++.+.+..++..+......+..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|+..+
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~ 84 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNG 84 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 45667788888888888888888877777788889999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 158 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 158 (294)
+.+++++|+++|.+++..+..|.||+++|...++.+++++|+
T Consensus 85 ~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 85 NLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 999999999999999999999999999999999999999884
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.64 E-value=1.3e-16 Score=108.63 Aligned_cols=95 Identities=27% Similarity=0.348 Sum_probs=82.3
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC
Q 022605 48 RQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 127 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ 127 (294)
..|.++.+++....+ .+.+....|++|||+||-.|+++++++|+..|++++.+|+.|-|||.-|+..||.+||++|+++
T Consensus 11 kNG~~DeVk~~v~~g-~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~ 89 (117)
T KOG4214|consen 11 KNGEIDEVKQSVNEG-LNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQN 89 (117)
T ss_pred ccCcHHHHHHHHHcc-ccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHc
Confidence 345666777666666 4555566899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHH
Q 022605 128 KANIDARDRWGSTAAA 143 (294)
Q Consensus 128 gad~~~~~~~g~t~L~ 143 (294)
|||-.....+|.+.+-
T Consensus 90 GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 90 GADRTIHAPDGTALIE 105 (117)
T ss_pred CcccceeCCCchhHHh
Confidence 9998888888866554
No 80
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.63 E-value=6.8e-16 Score=98.51 Aligned_cols=54 Identities=43% Similarity=0.657 Sum_probs=29.3
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLL 125 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll 125 (294)
|.||||+||..|+.+++++|+++|.|+|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 455666666666666666666666666666666666666666666666666554
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=3.1e-16 Score=137.65 Aligned_cols=104 Identities=33% Similarity=0.358 Sum_probs=88.7
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 151 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~ 151 (294)
....|.-|+..|-+++|+-.+..--|+...+..|.|+||-|++.||.+||++||+.|++||+.|.+||||||.|+..++.
T Consensus 550 PLaLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 550 PLALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV 629 (752)
T ss_pred hHHHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch
Confidence 44557788889999999999987778888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCC----CCCCcccc
Q 022605 152 EVYNILKARGAKVPKT----KRTPMTVA 175 (294)
Q Consensus 152 ~~v~~Ll~~ga~~~~~----~~t~l~~a 175 (294)
.+++.|++.|+.+-.. +.|+..-+
T Consensus 630 ~~ckqLVe~GaavfAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 630 PMCKQLVESGAAVFASTLSDMETAAEKC 657 (752)
T ss_pred HHHHHHHhccceEEeeecccccchhhhc
Confidence 9999999999887433 55665443
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.61 E-value=1.5e-15 Score=96.93 Aligned_cols=54 Identities=44% Similarity=0.612 Sum_probs=46.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 022605 105 GRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 158 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 158 (294)
|.||||+||..|+.+++++|+++|+|++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999999999999999999996
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.57 E-value=6e-15 Score=122.03 Aligned_cols=122 Identities=26% Similarity=0.330 Sum_probs=108.4
Q ss_pred CCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCC-----HHHHHHHHhcCC---CCCCCCCCCCcHHHH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGD-----VKGVEDLLNEGS---DVNSIDLDGRTALHI 111 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~-----~~~v~~Ll~~g~---~~~~~~~~g~TpLh~ 111 (294)
....+..+..+....+..+...+......+.+|.||||+|+..|+ .+++++|++.|+ +.+.+|..|.||||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~ 153 (235)
T COG0666 74 RLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHW 153 (235)
T ss_pred cCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHH
Confidence 334444444556666667777888888899999999999999999 999999999999 566679999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG 161 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 161 (294)
|+..|+.+++++|++.|++++..+..|.|++++|+..++.++++.+++.+
T Consensus 154 A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 154 AALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999976
No 84
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=3.3e-15 Score=122.35 Aligned_cols=118 Identities=25% Similarity=0.214 Sum_probs=103.6
Q ss_pred CccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNS-IDLDGRTALHIAACEGHVE 119 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~g~TpLh~A~~~g~~~ 119 (294)
..++.....+..+....++......+..|..|.++|..|+.+|+.+.|++||+.|+|+|. ++..++||||+|+..|+.+
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~d 93 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQD 93 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCch
Confidence 455666666777766667766666778899999999999999999999999999999985 4577999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 022605 120 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 158 (294)
Q Consensus 120 ~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 158 (294)
+.++|++.|+.+...+.-|+|+-..|++-|+.++|..+=
T Consensus 94 vcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 94 VCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred HHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 999999999999999999999999999999998887653
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=8.9e-15 Score=128.58 Aligned_cols=118 Identities=25% Similarity=0.207 Sum_probs=102.9
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q 022605 43 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVK 122 (294)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~ 122 (294)
++.++..|.++.+.+.+..-.+....|..|.|+||-|+..||.+||++||+.|++||+.|.+||||||+|+.++++.+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 34556677788888877777778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCC-CCCCCHHHHH--HHcCCHHHHHHHHHC
Q 022605 123 LLLSKKANIDARD-RWGSTAAADA--KYYGNVEVYNILKAR 160 (294)
Q Consensus 123 ~Ll~~gad~~~~~-~~g~t~L~~A--~~~g~~~~v~~Ll~~ 160 (294)
.|++.|+-|-+.. .++.||..-+ ...|..+|.+||-..
T Consensus 634 qLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 634 QLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence 9999998876654 5688888776 456889999999753
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=4.6e-14 Score=115.70 Aligned_cols=94 Identities=28% Similarity=0.309 Sum_probs=87.1
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHcC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR-DRWGSTAAADAKYYG 149 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~-~~~g~t~L~~A~~~g 149 (294)
....||..+..+|+.+-...||+---++|.+|.+|.|||..|+..|+.++|++|+++|+|+|.. +..++||||+|+..|
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG 90 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG 90 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence 3467999999999999999999876679999999999999999999999999999999999964 577999999999999
Q ss_pred CHHHHHHHHHCCCCC
Q 022605 150 NVEVYNILKARGAKV 164 (294)
Q Consensus 150 ~~~~v~~Ll~~ga~~ 164 (294)
+.++..+|++.|+..
T Consensus 91 n~dvcrllldaGa~~ 105 (396)
T KOG1710|consen 91 NQDVCRLLLDAGARM 105 (396)
T ss_pred CchHHHHHHhccCcc
Confidence 999999999999875
No 87
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.48 E-value=4.2e-14 Score=90.71 Aligned_cols=50 Identities=32% Similarity=0.356 Sum_probs=32.9
Q ss_pred CCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 022605 63 ELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIA 112 (294)
Q Consensus 63 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A 112 (294)
......|..|.||||+||..|+.++|++|++.|+|++.+|..|+||||+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45667889999999999999999999999999999999999999999997
No 88
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.45 E-value=1.2e-13 Score=131.90 Aligned_cols=104 Identities=24% Similarity=0.245 Sum_probs=94.9
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHH
Q 022605 43 RFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVK 122 (294)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~ 122 (294)
++.++..++.+.++.++..+...+..|..|.||||+||..|+.++|++|+++|+++|.+|..|.||||+|+..|+.++++
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~ 165 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 45667789999999999888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-------CCCCCCCCCCCCCHHHHHH
Q 022605 123 LLLSK-------KANIDARDRWGSTAAADAK 146 (294)
Q Consensus 123 ~Ll~~-------gad~~~~~~~g~t~L~~A~ 146 (294)
+|+++ |++++..+..|.+|+..+.
T Consensus 166 ~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 166 LLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 99999 8888888888887766554
No 89
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.21 E-value=1.9e-11 Score=106.58 Aligned_cols=97 Identities=40% Similarity=0.675 Sum_probs=90.1
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADA 145 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~~~~g~t~L~~A 145 (294)
....++..++++||..|++..++-+.-.|.|++.+|.+.+|+||.||..|+++++++|++. +.|++.+|++|+|||.-|
T Consensus 501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 501 PRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDA 580 (622)
T ss_pred cccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHh
Confidence 4456677899999999999999999999999999999999999999999999999999997 899999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCC
Q 022605 146 KYYGNVEVYNILKARGAK 163 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~ga~ 163 (294)
...+|.+++++|-+.-..
T Consensus 581 ~~F~h~~v~k~L~~~~~~ 598 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQYP 598 (622)
T ss_pred HhcCcHHHHHHHHHHhcc
Confidence 999999999999986443
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.16 E-value=1.8e-10 Score=101.12 Aligned_cols=89 Identities=28% Similarity=0.266 Sum_probs=82.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVE 152 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~ 152 (294)
-.||-.++.|++++.--||..|+++|..+ ..|.||||.|+..|+.--+++|+-+|||+++.|.+|+||+.+|-..||.+
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 45999999999999999999999999888 56999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHCCC
Q 022605 153 VYNILKARGA 162 (294)
Q Consensus 153 ~v~~Ll~~ga 162 (294)
+.+-|++.-.
T Consensus 215 laeRl~e~~y 224 (669)
T KOG0818|consen 215 LAERLVEIQY 224 (669)
T ss_pred HHHHHHHHHH
Confidence 8877776533
No 91
>PF13606 Ank_3: Ankyrin repeat
Probab=99.14 E-value=5.9e-11 Score=65.32 Aligned_cols=28 Identities=46% Similarity=0.834 Sum_probs=18.4
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q 022605 105 GRTALHIAACEGHVEVVKLLLSKKANID 132 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 132 (294)
|+||||+||+.|+.++|++|+++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5666666666666666666666666665
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.13 E-value=2.5e-11 Score=112.33 Aligned_cols=84 Identities=25% Similarity=0.222 Sum_probs=78.5
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHH
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAA 143 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~ 143 (294)
.+..|..|+|+||+|+..|..++++|||++|+|++.+| ..|+||||-|+.+|++||+-.|+++|+.+...|.+|.+||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 34567889999999999999999999999999999999 56999999999999999999999999999999999999999
Q ss_pred HHHHc
Q 022605 144 DAKYY 148 (294)
Q Consensus 144 ~A~~~ 148 (294)
+-++-
T Consensus 125 ~~~r~ 129 (1267)
T KOG0783|consen 125 FLSRV 129 (1267)
T ss_pred HHhhc
Confidence 88773
No 93
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.04 E-value=3.5e-10 Score=64.02 Aligned_cols=32 Identities=59% Similarity=0.874 Sum_probs=20.1
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q 022605 104 DGRTALHIAACEGHVEVVKLLLSKKANIDARD 135 (294)
Q Consensus 104 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~ 135 (294)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 35666666666666666666666666666554
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=99.02 E-value=3.6e-10 Score=62.16 Aligned_cols=30 Identities=33% Similarity=0.544 Sum_probs=28.3
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNS 100 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~ 100 (294)
+|+||||+||..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 95
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.01 E-value=1.1e-09 Score=97.91 Aligned_cols=92 Identities=37% Similarity=0.413 Sum_probs=82.6
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCC--CC--CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSD--VN--SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 149 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~--~~--~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g 149 (294)
..|..|+...++..+-+||.+|.. +| ..+.+|.|+||+||..|++.+.++|+-+|+|+..+|..|.|+|.||-+.|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence 358888889999999999999843 44 34577899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCC
Q 022605 150 NVEVYNILKARGAKVP 165 (294)
Q Consensus 150 ~~~~v~~Ll~~ga~~~ 165 (294)
..+++..|+++|...+
T Consensus 706 sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 706 SQECIDVLLQYGCPDE 721 (749)
T ss_pred cHHHHHHHHHcCCCcc
Confidence 9999999999997643
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.97 E-value=5.1e-10 Score=99.83 Aligned_cols=98 Identities=28% Similarity=0.377 Sum_probs=73.6
Q ss_pred CCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCC
Q 022605 63 ELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSD--VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGST 140 (294)
Q Consensus 63 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t 140 (294)
......+.+..+.||+|+..|+-++|+|+|++|.. ++..|..|.|+||-|+..++..++++|++.|+.+...|..|.|
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~t 969 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKT 969 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCC
Confidence 33444566677778888888888888888887753 5666777888888888888888888888888877777888888
Q ss_pred HHHHHHHcCCHHHHHHHHHC
Q 022605 141 AAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 141 ~L~~A~~~g~~~~v~~Ll~~ 160 (294)
|-.-|-+.|..+.+.||-.+
T Consensus 970 p~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 970 PQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHhcCCchHHHHHhhh
Confidence 88888888888877777643
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.96 E-value=1.1e-09 Score=61.90 Aligned_cols=33 Identities=36% Similarity=0.473 Sum_probs=30.9
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDL 103 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~ 103 (294)
+|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998763
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.94 E-value=2.5e-10 Score=105.89 Aligned_cols=90 Identities=29% Similarity=0.442 Sum_probs=78.2
Q ss_pred HHHHHh-cCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 022605 88 VEDLLN-EGSD-VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR-WGSTAAADAKYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 88 v~~Ll~-~g~~-~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 164 (294)
++-+++ .+.+ .|.+|..|+|+||+|+..+..++++||+++|+|++.+|. .|+||||-|+..|+.+++-+||++|+.+
T Consensus 33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL 112 (1267)
T KOG0783|consen 33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSL 112 (1267)
T ss_pred HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCce
Confidence 444443 3333 678899999999999999999999999999999999985 6999999999999999999999999886
Q ss_pred ---CCCCCCCccccCC
Q 022605 165 ---PKTKRTPMTVANP 177 (294)
Q Consensus 165 ---~~~~~t~l~~a~~ 177 (294)
|..|..||...++
T Consensus 113 ~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 113 RIKDKEGLSPLQFLSR 128 (1267)
T ss_pred EEecccCCCHHHHHhh
Confidence 5669999987765
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=3.4e-09 Score=94.13 Aligned_cols=87 Identities=26% Similarity=0.341 Sum_probs=72.6
Q ss_pred hHHHHHHHcCCHHHHHHHHh--cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 022605 74 MQLLFMACRGDVKGVEDLLN--EGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 151 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~--~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~ 151 (294)
-|||+++.....+....++. .+..++.+|..|.||||+|+..|+.+.++.|+.+|||+..+|+.||+|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 46899999888877666443 3456888899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHC
Q 022605 152 EVYNILKAR 160 (294)
Q Consensus 152 ~~v~~Ll~~ 160 (294)
+++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 877666643
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.86 E-value=6.9e-10 Score=97.05 Aligned_cols=88 Identities=31% Similarity=0.271 Sum_probs=82.4
Q ss_pred CccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVE 119 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~ 119 (294)
...++++..|++..++++..++.+....|.+.+|+||.||..|+++++++||+. +.+++.+|.+|+|||--|...+|.+
T Consensus 508 i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHH
Confidence 345788899999999999999999999999999999999999999999999986 6999999999999999999999999
Q ss_pred HHHHHHhCC
Q 022605 120 VVKLLLSKK 128 (294)
Q Consensus 120 ~v~~Ll~~g 128 (294)
++++|-+.-
T Consensus 588 v~k~L~~~~ 596 (622)
T KOG0506|consen 588 VVKLLEEAQ 596 (622)
T ss_pred HHHHHHHHh
Confidence 999998753
No 101
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.67 E-value=6.7e-08 Score=75.22 Aligned_cols=66 Identities=32% Similarity=0.262 Sum_probs=47.6
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 022605 95 GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 95 g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 160 (294)
+.++|++|..|||||+.|+..|+.+.|.||+.+| ++|...|..|.+++.+|-..|..++++.|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 3566777777777777777777777777777777 67777777777777777777777777777765
No 102
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.66 E-value=2.1e-08 Score=96.07 Aligned_cols=91 Identities=27% Similarity=0.342 Sum_probs=49.7
Q ss_pred HHHHHHHHhcCCCCCCCC--CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Q 022605 85 VKGVEDLLNEGSDVNSID--LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGA 162 (294)
Q Consensus 85 ~~~v~~Ll~~g~~~~~~~--~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 162 (294)
..++..=..+++++|..+ ..|.|+||.|+..|...++++|+++|+++|..|..|.||+|.+...|+...+..|+++|+
T Consensus 634 ~~~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a 713 (785)
T KOG0521|consen 634 LPRIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGA 713 (785)
T ss_pred hhhhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccc
Confidence 333333334444444322 445556666666666666666666666666666666666666666666666666666655
Q ss_pred CCC---CCCCCCcccc
Q 022605 163 KVP---KTKRTPMTVA 175 (294)
Q Consensus 163 ~~~---~~~~t~l~~a 175 (294)
+.+ ..|.+|+++|
T Consensus 714 ~~~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 714 DPNAFDPDGKLPLDIA 729 (785)
T ss_pred cccccCccCcchhhHH
Confidence 543 2255555555
No 103
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.66 E-value=1.5e-08 Score=94.91 Aligned_cols=235 Identities=12% Similarity=0.055 Sum_probs=138.3
Q ss_pred cccCCCCCccccCCCCCCCC----CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHH
Q 022605 45 SFGRQSSLDPIRRSPVQDEL----TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEV 120 (294)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~ 120 (294)
.++..|+...++..++.... .+..|.-|+++|+.|..+-+.+++++|++++..+ .-+|.+|+..|..++
T Consensus 31 ~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~ 103 (822)
T KOG3609|consen 31 LAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPL 103 (822)
T ss_pred HHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHH
Confidence 34445666666555443332 3456777888999999888999999998876554 238888888899999
Q ss_pred HHHHHhCCCCCC----------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCcccccCc
Q 022605 121 VKLLLSKKANID----------ARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNP 187 (294)
Q Consensus 121 v~~Ll~~gad~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~~~l~~~ 187 (294)
|+.++.+-.... ..-.-+.|||.+||..++.||+++|+++|+++... .+.+-.+-......++ ...
T Consensus 104 VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~C~C~~C~~~~~~dsl-hS~ 182 (822)
T KOG3609|consen 104 VELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIRCECKTCKRETVTDSL-HSL 182 (822)
T ss_pred HHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccccCchHhhhccccCCc-chH
Confidence 999888743221 11235679999999999999999999999987544 1111111111111111 222
Q ss_pred chhhhhcccCCCCCceeeeeecCc-hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 188 LELQVRKADGITKGSYQVAKWNGT-KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 188 ~~~~~~~~~~~~~t~l~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
..+++-..-. .|-.++..... ....-.|-..-..-.....++.+.+.-..++.....+.+|..+....++-++..+
T Consensus 183 srin~yraLa---Spa~i~LsS~DPiltAf~LS~eL~~La~~E~Efk~dY~~Ls~qcq~F~v~LLdq~r~s~Ele~iLn~ 259 (822)
T KOG3609|consen 183 SRVNIYRALA---SPALIWLSSDDPILTAFALSWDLQQLASDELEFKEDYRDLSMQCQRFAVDLLDQARTSDELEMILNN 259 (822)
T ss_pred HHHHHHHHhh---cHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHcC
Confidence 2222211110 11111111111 1111111111111222345666777777777778888899888777666555544
Q ss_pred CCCCC-----CCcccccccccccccccCC
Q 022605 267 HAKVS-----MPITPFLTLSFHKQTHTSG 290 (294)
Q Consensus 267 ~~~g~-----l~~t~l~~a~~n~~~~~~~ 290 (294)
..+.+ .+..-|-+|+.+.|...|-
T Consensus 260 ~~~~~~~~~~~sl~RLklAIkyeqK~FVa 288 (822)
T KOG3609|consen 260 RNNCPERMTRISLPRLKLAIKYEQKEFVA 288 (822)
T ss_pred CCCCcccccccccHHHHHHHHHhhhheec
Confidence 44433 6777888999998877654
No 104
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.65 E-value=2.9e-08 Score=88.91 Aligned_cols=89 Identities=27% Similarity=0.311 Sum_probs=70.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHH
Q 022605 76 LLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKAN--IDARDRWGSTAAADAKYYGNVEV 153 (294)
Q Consensus 76 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad--~~~~~~~g~t~L~~A~~~g~~~~ 153 (294)
+..|+..+++--++.+-.+|.++-.++.+..|.||+|+..|+-++|+|++++|.. ++..|..|.|+||-|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 5667777776666666667888777888888888888888888888888888753 45567788888888888888888
Q ss_pred HHHHHHCCCCC
Q 022605 154 YNILKARGAKV 164 (294)
Q Consensus 154 v~~Ll~~ga~~ 164 (294)
..+|++.|+.+
T Consensus 950 c~~lvdagasl 960 (1004)
T KOG0782|consen 950 CQLLVDAGASL 960 (1004)
T ss_pred HHHHHhcchhh
Confidence 88888888775
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.64 E-value=5.9e-08 Score=91.04 Aligned_cols=135 Identities=22% Similarity=0.168 Sum_probs=104.6
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcC----CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEG----SDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g----~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
.+.--...|+++|+...|+..++.. .++|+.|.-|+++|+.|+.+.+.+++++|++++..+ ..+|.+|+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI 96 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAI 96 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHH
Confidence 3445688999999999999999752 568899999999999999999999999999986544 35999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCCh
Q 022605 147 YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDP 226 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~ 226 (294)
..|..++|+.++.+-......+. +... ....-..+-||+.+||..++.||++.|+++|+..+
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~-----~~d~-------------~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLER-----SGDA-------------NSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHhcccccchhcc-----cccc-------------CcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 99999999999987543322111 1000 01122334689999999999999999999998665
Q ss_pred Hhhh
Q 022605 227 ERIN 230 (294)
Q Consensus 227 ~~~~ 230 (294)
..-+
T Consensus 159 ~PH~ 162 (822)
T KOG3609|consen 159 IPHD 162 (822)
T ss_pred CCcc
Confidence 4443
No 106
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.63 E-value=9.5e-08 Score=81.80 Aligned_cols=85 Identities=27% Similarity=0.261 Sum_probs=67.8
Q ss_pred hhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 022605 73 TMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVE 152 (294)
Q Consensus 73 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~ 152 (294)
.--|..||+.|+.+.|++|++.|.++|++|....+||.+|+..||.++|++|+++||-...-..+|.-++ +++.+ ..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~-YgaLn--d~ 113 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH-YGALN--DR 113 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh-hhhhh--HH
Confidence 3459999999999999999999999999999999999999999999999999999986655445665543 34333 33
Q ss_pred HHHHHHHC
Q 022605 153 VYNILKAR 160 (294)
Q Consensus 153 ~v~~Ll~~ 160 (294)
|-+.|+.+
T Consensus 114 IR~mllsy 121 (516)
T KOG0511|consen 114 IRRMLLSY 121 (516)
T ss_pred HHHHHHHH
Confidence 34444443
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.58 E-value=9.1e-08 Score=85.88 Aligned_cols=66 Identities=30% Similarity=0.293 Sum_probs=61.8
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANID 132 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 132 (294)
..+.+|.|+||.||..|++.+.++||=+|+|+.++|..|.|+|.+|-+.|..+|+..|+++|+..+
T Consensus 656 ~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 656 CGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred ccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 356778999999999999999999999999999999999999999999999999999999998643
No 108
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.57 E-value=4.8e-08 Score=86.15 Aligned_cols=87 Identities=22% Similarity=0.147 Sum_probs=77.2
Q ss_pred CCccccccCCCCCccccCCCCCCCCCCCCC-CCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDELTVPEN-LDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
+..++..++.++.+...+++..+...+... ..|.||||.||..|+..-+++|+=.|+|+++.|.+|.||+.+|-..||-
T Consensus 134 srQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 445677788899999999999998887664 5699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 022605 119 EVVKLLLS 126 (294)
Q Consensus 119 ~~v~~Ll~ 126 (294)
++.+-|++
T Consensus 214 ~laeRl~e 221 (669)
T KOG0818|consen 214 ELAERLVE 221 (669)
T ss_pred HHHHHHHH
Confidence 88777765
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.50 E-value=2.3e-07 Score=82.75 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC
Q 022605 61 QDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 127 (294)
Q Consensus 61 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ 127 (294)
........|..|.||||.|+..|+.+.++.|+.+|+++-.++..||+|||.|+..|+.+++..++.+
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 3445667788999999999999999999999999999999999999999999999999999888865
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.45 E-value=4.3e-07 Score=77.89 Aligned_cols=60 Identities=28% Similarity=0.395 Sum_probs=56.7
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q 022605 108 ALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT 167 (294)
Q Consensus 108 pLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 167 (294)
-|..||+.|..+.|++|++.|.+||++|....+||.+|+..||.++|++|+++||-.+..
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd 98 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD 98 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc
Confidence 588999999999999999999999999999999999999999999999999999977544
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.40 E-value=2.4e-07 Score=88.82 Aligned_cols=110 Identities=25% Similarity=0.216 Sum_probs=87.3
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCCHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAAA 143 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~~~~g~t~L~ 143 (294)
......|.|.||.++..+....++.+++- |-.....|.+|.-.+|+ |..++.+++-+|+. +|..++.+|..||||||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence 34567799999999999999999999985 55445556667777777 55677777766665 48899999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCC---------CCCCccccC
Q 022605 144 DAKYYGNVEVYNILKARGAKVPKT---------KRTPMTVAN 176 (294)
Q Consensus 144 ~A~~~g~~~~v~~Ll~~ga~~~~~---------~~t~l~~a~ 176 (294)
+|+..|+..++..|++.|++.... |.|+-.+|.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh
Confidence 999999999999999988875321 566655553
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.35 E-value=1.7e-06 Score=67.57 Aligned_cols=73 Identities=19% Similarity=0.141 Sum_probs=65.0
Q ss_pred CCCCCCCCchhHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCC
Q 022605 64 LTVPENLDSTMQLLFMACRGDVKGVEDLLNEG-SDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR 136 (294)
Q Consensus 64 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~ 136 (294)
.++..|..|+|||+.||..|+.+.|.||+++| +.+...|..|.+++.+|-..|+.++|..|.+.-.+-...+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~n 77 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMN 77 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCccc
Confidence 45678889999999999999999999999999 89999999999999999999999999999998555444443
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.35 E-value=4.4e-07 Score=87.22 Aligned_cols=88 Identities=34% Similarity=0.410 Sum_probs=82.2
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
.|.|+||.|+..|...++++|+++|+++|.+|..|.||||.+...|+...+..|+++|++.++.+..|.+|+++|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHH
Q 022605 151 VEVYNILK 158 (294)
Q Consensus 151 ~~~v~~Ll 158 (294)
.+++-++.
T Consensus 735 ~d~~~l~~ 742 (785)
T KOG0521|consen 735 ADIVLLLR 742 (785)
T ss_pred ccHHHHHh
Confidence 77665554
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.95 E-value=2e-06 Score=82.68 Aligned_cols=116 Identities=20% Similarity=0.127 Sum_probs=87.4
Q ss_pred ccccCCCCCccccCCCCC-CCCCCCCCCCchhHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 022605 44 FSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACRGDVKGVEDLL-NEGSDVNSIDLDGRTALHIAACEGHVEVV 121 (294)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~~~~g~TpLh~A~~~g~~~~v 121 (294)
+.++..+..-.+..+++. +......+.+|.-.+|+ |..++++.+-+++ -.|..++.+|..||||||||+..|+..++
T Consensus 579 hL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~ 657 (975)
T KOG0520|consen 579 HLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLV 657 (975)
T ss_pred HHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHH
Confidence 333334444444444444 55566677778888888 4456666655555 46888999999999999999999999999
Q ss_pred HHHHhCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 022605 122 KLLLSKKANIDA------RDRWGSTAAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 122 ~~Ll~~gad~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 160 (294)
..|++.|++... ....|.|+-.+|-.+|+..+..||-+.
T Consensus 658 a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 658 ASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred HHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 999988876543 345799999999999999998888765
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.63 E-value=0.00011 Score=38.82 Aligned_cols=27 Identities=67% Similarity=0.938 Sum_probs=15.5
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCC
Q 022605 105 GRTALHIAACEGHVEVVKLLLSKKANI 131 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~~Ll~~gad~ 131 (294)
|.||||+|+..++.+++++|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 455666666666666666666555543
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.56 E-value=0.00016 Score=64.60 Aligned_cols=71 Identities=27% Similarity=0.244 Sum_probs=54.3
Q ss_pred HHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 022605 85 VKGVEDLLNEGSDVNS------IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILK 158 (294)
Q Consensus 85 ~~~v~~Ll~~g~~~~~------~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 158 (294)
...+++|.+++.+.|. .+.--.|+||+|+..|..++|.+||+.|+|+...|..|.||..++. +.++-..++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 5678888888776543 2344568899999999999999999999999888989999988876 455555554
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.33 E-value=0.0004 Score=36.47 Aligned_cols=29 Identities=34% Similarity=0.541 Sum_probs=26.1
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVN 99 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~ 99 (294)
.|.||||+|+..|+.++++.|++.|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 36899999999999999999999988764
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.95 E-value=0.00079 Score=60.26 Aligned_cols=69 Identities=16% Similarity=0.148 Sum_probs=56.8
Q ss_pred cHHHHHHHHhCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCccccCCCCCccccc
Q 022605 117 HVEVVKLLLSKKANIDA------RDRWGSTAAADAKYYGNVEVYNILKARGAKVP---KTKRTPMTVANPREVPEYEL 185 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~t~l~~a~~~~~~~~l~ 185 (294)
-.+.+++|.+++.+.|. .+.-..|+||+|+..|..++|.+||+.|+|+. -.|.||..+++..++...++
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~ 480 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFI 480 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHH
Confidence 46789999999887753 34557799999999999999999999999984 44999999999777665554
No 119
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=96.17 E-value=0.0054 Score=54.63 Aligned_cols=93 Identities=35% Similarity=0.556 Sum_probs=68.1
Q ss_pred cccCcchhhhhcccCCCC-CceeeeeecCch-hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC-C
Q 022605 183 YELNPLELQVRKADGITK-GSYQVAKWNGTK-VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI-P 259 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~-t~l~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~-~ 259 (294)
+.++..++.+....+.|. ..++.+.+.|.. ..++.+......+.. .+.+...+.+..+..|++||++++.+...+ .
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 334333344444444443 567899999998 777777644333333 667888999999999999999999999888 7
Q ss_pred eEEEEecCCCCCCCccc
Q 022605 260 MMIVLEYHAKVSMPITP 276 (294)
Q Consensus 260 l~~~~e~~~~g~l~~t~ 276 (294)
+.++|||+++|+|..-.
T Consensus 115 ~~iVtEy~~~GsL~~~l 131 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLL 131 (362)
T ss_pred eEEEEEeCCCCcHHHHH
Confidence 99999999999987544
No 120
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.94 E-value=0.074 Score=43.32 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=68.1
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCCC----CCCCcHHHHHH--HcCcHHHHHHHHhCC-CCCCC---CCCCCCCH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSID----LDGRTALHIAA--CEGHVEVVKLLLSKK-ANIDA---RDRWGSTA 141 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~----~~g~TpLh~A~--~~g~~~~v~~Ll~~g-ad~~~---~~~~g~t~ 141 (294)
-.++|.+|..++.-+++.+|+.+- +....| ..+.--+-++. .+.+..++++++++| ++||. .-+.|.|-
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 457888999889999999999741 111111 12222344443 356778999999997 57774 35789999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC
Q 022605 142 AADAKYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 142 L~~A~~~g~~~~v~~Ll~~ga~~ 164 (294)
|.-|+..+..+++.+||++||-.
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999854
No 121
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=95.71 E-value=0.026 Score=52.81 Aligned_cols=90 Identities=23% Similarity=0.449 Sum_probs=65.2
Q ss_pred cccccCcchhhhhcccCCCC-CceeeeeecCc--hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 181 PEYELNPLELQVRKADGITK-GSYQVAKWNGT--KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 181 ~~~l~~~~~~~~~~~~~~~~-t~l~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
.++.+++.++.+..+.+.|+ .-.+..+|..+ ...|+.|. .+.....++....-+.....|+++|++|+.|+..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK----EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh----hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 45666666666667666665 44566666654 34566665 4445555666665666677999999999999999
Q ss_pred CCeEEEEecCCCCCCCc
Q 022605 258 IPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 258 ~~l~~~~e~~~~g~l~~ 274 (294)
++++|++|||..|+|-+
T Consensus 336 pPFYIiTEfM~yGNLLd 352 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLD 352 (1157)
T ss_pred CCeEEEEecccCccHHH
Confidence 99999999999998753
No 122
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.97 E-value=0.019 Score=55.13 Aligned_cols=60 Identities=25% Similarity=0.483 Sum_probs=51.2
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...||.|.+. .......+++..+.+.+...|++||++|+.|....|+.++.|||..|+|.
T Consensus 518 lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~ 577 (774)
T KOG1026|consen 518 LVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLH 577 (774)
T ss_pred ehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHH
Confidence 3567777533 44446678899999999999999999999999999999999999999986
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.38 E-value=0.1 Score=42.57 Aligned_cols=48 Identities=31% Similarity=0.304 Sum_probs=42.7
Q ss_pred cCCHHHHHHHHhcC-CCCCC---CCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 022605 82 RGDVKGVEDLLNEG-SDVNS---IDLDGRTALHIAACEGHVEVVKLLLSKKA 129 (294)
Q Consensus 82 ~g~~~~v~~Ll~~g-~~~~~---~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga 129 (294)
..+..++++.|++| +++|. +-.+|.|-|--|..+++.+++.+|+++||
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 45788999999999 78874 34789999999999999999999999998
No 124
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=93.53 E-value=0.061 Score=48.96 Aligned_cols=90 Identities=32% Similarity=0.475 Sum_probs=66.5
Q ss_pred cccccCcchhhhhcccCCCC-CceeeeeecCchh-hhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 181 PEYELNPLELQVRKADGITK-GSYQVAKWNGTKV-WVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 181 ~~~l~~~~~~~~~~~~~~~~-t~l~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
..+.+.+..+.+...-+.|. .-.+...++|+.. .++.+. .+. .....+.....+..+..|.+||++...|..+.
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik-~~~---m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~ 274 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIK-EGS---MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE 274 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEe-ccc---cChhHHHHHHHHHHhCcccCeEEEEEEEecCC
Confidence 34455555556666666665 5678889999854 455554 432 23345567788888899999999999999988
Q ss_pred CeEEEEecCCCCCCCc
Q 022605 259 PMMIVLEYHAKVSMPI 274 (294)
Q Consensus 259 ~l~~~~e~~~~g~l~~ 274 (294)
+++++|||+.+|+|-.
T Consensus 275 piyIVtE~m~~GsLl~ 290 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLD 290 (468)
T ss_pred ceEEEEEecccCcHHH
Confidence 9999999999999863
No 125
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.29 E-value=0.13 Score=40.63 Aligned_cols=143 Identities=14% Similarity=0.025 Sum_probs=93.4
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 149 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g 149 (294)
.+-.-.|..|+..+.+.+++..-+...+- -...++.+-.||...+.|+|+|+-+. .. -.+-.+-+.+|...+
T Consensus 44 c~~~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~--i~~~~~iFdIA~~~k 115 (192)
T PF03158_consen 44 CDMWCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LH--IYNPEDIFDIAFAKK 115 (192)
T ss_pred CCHHHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cC--CCCchhhhhhhhhcc
Confidence 34456678888899999998887653211 13467788899999999999999542 22 233345677888887
Q ss_pred CHHHH----HHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCC
Q 022605 150 NVEVY----NILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 150 ~~~~v----~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
..++. ++++++...- .......++ ..-|..|+..|-...|...++.|+..
T Consensus 116 DlsLyslGY~l~~~~~~~~------------~~~d~~~ll--------------~~hl~~a~~kgll~F~letlkygg~~ 169 (192)
T PF03158_consen 116 DLSLYSLGYKLLFNRMMSE------------HNEDPTSLL--------------TQHLEKAAAKGLLPFVLETLKYGGNV 169 (192)
T ss_pred chhHHHHHHHHHHhhcccc------------cccCHHHHH--------------HHHHHHHHHCCCHHHHHHHHHcCCcc
Confidence 77662 1122221110 000011111 11467888899998888888888755
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhh
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVG 252 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~ 252 (294)
.. +.+..|++.+|..|+.++.
T Consensus 170 ~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 170 DI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred cH------HHHHHHHHhhHHHHHHHhh
Confidence 33 7899999999999998874
No 126
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=93.05 E-value=0.027 Score=52.21 Aligned_cols=81 Identities=27% Similarity=0.503 Sum_probs=62.3
Q ss_pred hhhcccCCCC-CceeeeeecC-chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 191 QVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 191 ~~~~~~~~~~-t~l~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
.+..+-+.|. +-+|+....| -...||.|. ..+..+..+++...+-...+..|++||++++.|..+.++-+++||+.
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr--~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILR--PDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecC--cccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 3445555554 6788887777 555667664 22334445677788888888899999999999999999999999999
Q ss_pred CCCCC
Q 022605 269 KVSMP 273 (294)
Q Consensus 269 ~g~l~ 273 (294)
+|+|-
T Consensus 619 nGDLn 623 (807)
T KOG1094|consen 619 NGDLN 623 (807)
T ss_pred cCcHH
Confidence 99975
No 127
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=92.57 E-value=0.089 Score=46.67 Aligned_cols=61 Identities=20% Similarity=0.438 Sum_probs=47.1
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+||.+.... -.....+.-.+.+.+..+-.|++||.++..+..+..+++|||||..|+|-
T Consensus 37 ~VAIK~i~~~~-l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs 97 (429)
T KOG0595|consen 37 EVAIKCIAKKK-LNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLS 97 (429)
T ss_pred eEEeeeehhhc-cCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHH
Confidence 34455554332 13344455568888999999999999999999999999999999999975
No 128
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=92.31 E-value=0.055 Score=50.19 Aligned_cols=55 Identities=29% Similarity=0.504 Sum_probs=48.1
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC--------cccccccccccccc
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP--------ITPFLTLSFHKQTH 287 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~--------~t~l~~a~~n~~~~ 287 (294)
.|.+-...+..|++|++|++.|.+.+..-|+||||++|.|+ .||-.++.|.++|.
T Consensus 160 ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA 222 (904)
T KOG4721|consen 160 ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIA 222 (904)
T ss_pred hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhh
Confidence 47777888999999999999999999999999999999986 57778888877764
No 129
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.73 E-value=0.4 Score=32.28 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=34.7
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK 127 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ 127 (294)
.-+..|+..|+.|+++.+++.+ .++ ...+..|+..-+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3477888888888888888654 221 2478888888888888888875
No 130
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.61 E-value=0.18 Score=45.01 Aligned_cols=71 Identities=28% Similarity=0.383 Sum_probs=52.5
Q ss_pred CceeeeeecC-chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC-eEEEEecCCCCCCCc
Q 022605 201 GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP-MMIVLEYHAKVSMPI 274 (294)
Q Consensus 201 t~l~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~-l~~~~e~~~~g~l~~ 274 (294)
...+.+...+ ..-+||.+-...... ..++.+.+....+..|+++|++++.|..... ..+++||+++|+|..
T Consensus 89 g~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d 161 (361)
T KOG1187|consen 89 GTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLED 161 (361)
T ss_pred eEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHH
Confidence 3445455444 455666554222221 4458999999999999999999999998884 999999999999854
No 131
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.35 E-value=0.32 Score=32.79 Aligned_cols=47 Identities=23% Similarity=0.256 Sum_probs=40.1
Q ss_pred cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 022605 107 TALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 107 TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 160 (294)
..+..|+.+|+.|+++.+++.+ .++ ...+..|+..-+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4689999999999999999865 222 3479999999999999999976
No 132
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.11 E-value=0.44 Score=44.04 Aligned_cols=44 Identities=23% Similarity=0.423 Sum_probs=39.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
-..+.+.++....|.+||.||.+.....++|++|||+..|+|-+
T Consensus 316 LilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTD 359 (550)
T KOG0578|consen 316 LLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTD 359 (550)
T ss_pred hhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhh
Confidence 45688999999999999999999999999999999999999643
No 133
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=87.87 E-value=1.2 Score=35.29 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=72.5
Q ss_pred CCCccccccC-CCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHH----HHHHhcCCCCCCCCC--CCCcHHHH
Q 022605 39 RNNMRFSFGR-QSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGV----EDLLNEGSDVNSIDL--DGRTALHI 111 (294)
Q Consensus 39 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v----~~Ll~~g~~~~~~~~--~g~TpLh~ 111 (294)
....+|..|+ ..+.+.++|+-..-... +..+-+-+|....+++.. .+++++...-...|. -=..-|.+
T Consensus 75 ~~q~LFElAC~~qkydiV~WI~qnL~i~-----~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~ 149 (192)
T PF03158_consen 75 LNQELFELACEEQKYDIVKWIGQNLHIY-----NPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEK 149 (192)
T ss_pred HHHHHHHHHHHHccccHHHHHhhccCCC-----CchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHH
Confidence 4455666655 55667777773332222 233457778888887753 234454322211111 00135789
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKA 159 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 159 (294)
|+..|-+..|...+++|.+++. ++|..|+..++..++.+++.
T Consensus 150 a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 150 AAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 9999999999999999987764 69999999999999999875
No 134
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=85.44 E-value=1.1 Score=40.22 Aligned_cols=68 Identities=22% Similarity=0.358 Sum_probs=50.4
Q ss_pred ecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcc
Q 022605 208 WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPIT 275 (294)
Q Consensus 208 ~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t 275 (294)
..|....|+.+.+..-.+..-.-.-+..+.+....+|++|+...........+.++|||..+|.||+.
T Consensus 76 ~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDY 143 (668)
T KOG0611|consen 76 KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDY 143 (668)
T ss_pred cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHH
Confidence 45677777766433222222122335778888899999999999999999999999999999999864
No 135
>PHA02988 hypothetical protein; Provisional
Probab=84.59 E-value=1.1 Score=38.31 Aligned_cols=74 Identities=15% Similarity=0.247 Sum_probs=52.2
Q ss_pred CCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC----CCCeEEEEecCCCCCCC
Q 022605 200 KGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ----NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 200 ~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~----~~~l~~~~e~~~~g~l~ 273 (294)
...++.+...|..-++|.+-................+....+..|++|++++..... ...+.+++||+.+|+|.
T Consensus 33 ~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~ 110 (283)
T PHA02988 33 QNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLR 110 (283)
T ss_pred ceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHH
Confidence 345677788888777777643322222223455677888888999999999976543 34678999999999875
No 136
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=84.07 E-value=0.3 Score=47.13 Aligned_cols=60 Identities=30% Similarity=0.504 Sum_probs=45.8
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+|.|. .| -......++-+...+.-+..|++|+.+-+..+...+.|+++|||.+|+|.
T Consensus 659 ~VAIKTLK-~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLD 718 (996)
T KOG0196|consen 659 TVAIKTLK-AG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLD 718 (996)
T ss_pred eEEEeeec-cC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHH
Confidence 34556663 33 33334455666667777778999999999999999999999999999875
No 137
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=84.06 E-value=0.72 Score=42.51 Aligned_cols=49 Identities=33% Similarity=0.577 Sum_probs=40.9
Q ss_pred ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......++...--+....+|++||++.+.+....|+++++|++.+|+|-
T Consensus 201 ~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~ 249 (474)
T KOG0194|consen 201 TKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLD 249 (474)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHH
Confidence 3444456666667777889999999999999999999999999999764
No 138
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=79.71 E-value=1.8 Score=43.57 Aligned_cols=50 Identities=26% Similarity=0.500 Sum_probs=42.6
Q ss_pred CChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 224 ~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.....++...-.+.....|++||++++.+-...+.++++|||.+|+|.
T Consensus 734 ~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~ 783 (1025)
T KOG1095|consen 734 SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLL 783 (1025)
T ss_pred CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHH
Confidence 33455566777777888999999999999999999999999999999985
No 139
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=79.69 E-value=1.6 Score=38.45 Aligned_cols=52 Identities=29% Similarity=0.406 Sum_probs=43.5
Q ss_pred CCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC-eEEEEecCCCCCCC
Q 022605 222 SHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP-MMIVLEYHAKVSMP 273 (294)
Q Consensus 222 ~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~-l~~~~e~~~~g~l~ 273 (294)
...++...+.-...+.+..+..++.||.+-++...+.. +.++||||..|+|.
T Consensus 114 ~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd 166 (364)
T KOG0581|consen 114 LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLD 166 (364)
T ss_pred ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHH
Confidence 34555666666688888888899999999999988885 99999999999985
No 140
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=78.63 E-value=1.9 Score=37.16 Aligned_cols=43 Identities=23% Similarity=0.463 Sum_probs=37.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+-...+.+..+...+.+|+|.++.....+++++||||.-|+..
T Consensus 74 EIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 74 EIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred HHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 3446677777888999999999999999999999999999865
No 141
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=76.18 E-value=2.5 Score=39.86 Aligned_cols=86 Identities=28% Similarity=0.566 Sum_probs=63.4
Q ss_pred cCcchhhhhcccCCCC-CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEE
Q 022605 185 LNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIV 263 (294)
Q Consensus 185 ~~~~~~~~~~~~~~~~-t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~ 263 (294)
+....+.+...-+.|. .-.|.+-|+|.+ +||.|- -....+.....++.......+-.|.+|+-|++.+..+ ++.|+
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whGdV-AVK~Ln-v~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-~~AIi 465 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHGDV-AVKLLN-VDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-PLAII 465 (678)
T ss_pred cCHHHhhccceeccccccceeecccccce-EEEEEe-cCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-ceeee
Confidence 3333444445555553 557888888876 566664 3345556777889999989999999999999999865 45999
Q ss_pred EecCCCCCCC
Q 022605 264 LEYHAKVSMP 273 (294)
Q Consensus 264 ~e~~~~g~l~ 273 (294)
+.+|...+||
T Consensus 466 TqwCeGsSLY 475 (678)
T KOG0193|consen 466 TQWCEGSSLY 475 (678)
T ss_pred ehhccCchhh
Confidence 9999988888
No 142
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=76.11 E-value=1.2 Score=41.09 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=50.8
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-..+|-+. |+.-++|.|.+.--........-.+.-.+.+....+.||+++-+......++++|||+++|++.
T Consensus 156 eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~m 229 (550)
T KOG0605|consen 156 EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMM 229 (550)
T ss_pred eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHH
Confidence 34555443 5566677775433222233333456667777888999999999999999999999999999864
No 143
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=73.23 E-value=2 Score=36.11 Aligned_cols=70 Identities=34% Similarity=0.574 Sum_probs=46.7
Q ss_pred ceeeeeec------CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~------g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.++.|.+. +...+|+.+- . .......+.....+....+.+|++|+++++.+....+.++++||+..|+|.
T Consensus 14 ~v~~~~~~~~~~~~~~~V~vk~~~-~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~ 89 (259)
T PF07714_consen 14 KVYRAEWKQKDNDKNQPVAVKILK-P-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLD 89 (259)
T ss_dssp EEEEEEEESTTTSSEEEEEEEEES-T-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHH
T ss_pred EEEEEEEEcccCCCCEEEEEEEec-c-ccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 46666666 3344555552 1 223333455666777777779999999999998888899999999998775
No 144
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=72.47 E-value=2.6 Score=37.93 Aligned_cols=65 Identities=25% Similarity=0.348 Sum_probs=48.2
Q ss_pred cCchhhhHhhhccCCCChH--hhh--hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 209 NGTKVWVKILDKESHKDPE--RIN--AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~~~--~~~--~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.|..-+||.+-++...... ..+ +-.+.+.+..+..|+.||++..........++++||+.+|+|.
T Consensus 196 tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLf 264 (475)
T KOG0615|consen 196 TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELF 264 (475)
T ss_pred cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHH
Confidence 4556667766544322211 112 2258899999999999999999999888899999999999975
No 145
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=72.03 E-value=3.4 Score=35.45 Aligned_cols=54 Identities=19% Similarity=0.360 Sum_probs=42.7
Q ss_pred ccCCCChHhhhhhhhHHHHHHHcCCCchhhhhh-hhcCCCC-eEEEEecCCCCCCC
Q 022605 220 KESHKDPERINAFTHELTIVEKARHPNVVQFVG-AVTQNIP-MMIVLEYHAKVSMP 273 (294)
Q Consensus 220 ~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~-~~~~~~~-l~~~~e~~~~g~l~ 273 (294)
..+..+..........+.+..+.+|++||+|.. +...+.. +.++||++..|+|.
T Consensus 53 ~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLs 108 (375)
T KOG0591|consen 53 QFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLS 108 (375)
T ss_pred chhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHH
Confidence 366666666667778899999999999999997 4444444 88999999999974
No 146
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=70.29 E-value=5.9 Score=34.37 Aligned_cols=60 Identities=20% Similarity=0.372 Sum_probs=47.9
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKV 270 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g 270 (294)
|.+.+||.+++. .+++...+--...+-+..+..|+++|.++..+.....++++.||+...
T Consensus 27 gqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhT 86 (396)
T KOG0593|consen 27 GQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHT 86 (396)
T ss_pred ccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchH
Confidence 556677777744 355666555567788888999999999999999999999999998654
No 147
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=70.23 E-value=7.3 Score=33.25 Aligned_cols=42 Identities=12% Similarity=0.270 Sum_probs=35.3
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|+++......+...++++||+..|++.
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (291)
T cd05612 48 VHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELF 89 (291)
T ss_pred HHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHH
Confidence 445667777889999999998888888899999999988874
No 148
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=68.84 E-value=12 Score=30.90 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=44.5
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+...........+.....+......+|++++++..........++++||+..+++.
T Consensus 25 ~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (258)
T cd05578 25 KKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLR 88 (258)
T ss_pred CcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHH
Confidence 3344445443322222233345566777888889999999998888888899999999888764
No 149
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=68.23 E-value=5.1 Score=38.60 Aligned_cols=60 Identities=30% Similarity=0.533 Sum_probs=45.7
Q ss_pred hhhHhhhccCCCChHhhhhhhhHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 213 VWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 213 ~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
.+||.+. ..... ........++......| |++++.+|+++..+.+++++.||+..|++..
T Consensus 331 VaVK~~k-~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~ 391 (609)
T KOG0200|consen 331 VAVKMLK-ENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLE 391 (609)
T ss_pred EEEEecc-cccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHH
Confidence 3456554 33233 44456667777777776 8999999999999999999999999999863
No 150
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=66.42 E-value=4.3 Score=36.97 Aligned_cols=90 Identities=20% Similarity=0.355 Sum_probs=57.3
Q ss_pred ccccCcchhhhhcccCCCCCc-eeeeeecC--chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 182 EYELNPLELQVRKADGITKGS-YQVAKWNG--TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~t~-l~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
++.+...+..+...-+.|-++ .|.|...- ....||.+--.. ++ +..+.-...++......|++|+++--+...+.
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk-c~-~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK-CN-NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS 97 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh-hh-hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc
Confidence 344444444555555566544 44444332 233344442111 11 11344567788888899999999999999999
Q ss_pred CeEEEEecCCCCCCC
Q 022605 259 PMMIVLEYHAKVSMP 273 (294)
Q Consensus 259 ~l~~~~e~~~~g~l~ 273 (294)
.+|++|-||..|++.
T Consensus 98 ~LWvVmpfMa~GS~l 112 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLL 112 (516)
T ss_pred eeEEeehhhcCCcHH
Confidence 999999999999864
No 151
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=66.31 E-value=4 Score=38.36 Aligned_cols=63 Identities=22% Similarity=0.480 Sum_probs=47.7
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|...++| ++.+..-+..........+.+.....|++||+++........+++++||...|.++
T Consensus 81 ~~~VaiK-~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~ 143 (596)
T KOG0586|consen 81 GTEVAIK-IIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELF 143 (596)
T ss_pred CceEEEE-EehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhH
Confidence 3444444 44444444444444677888899999999999999999999999999999998765
No 152
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=66.31 E-value=4.4 Score=36.47 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=40.2
Q ss_pred hhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 228 RINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+...-.|.-.+.....|+.+..+......+.-..++||||++|+|+
T Consensus 120 Kl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~ 165 (459)
T KOG0610|consen 120 KLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLH 165 (459)
T ss_pred HHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHH
Confidence 3344568888999999999999999999998899999999999986
No 153
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=64.24 E-value=3.2 Score=37.04 Aligned_cols=43 Identities=12% Similarity=0.206 Sum_probs=35.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+....+|+.|+++......+...++++||+..|+|.
T Consensus 47 ~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (377)
T cd05629 47 HVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLM 89 (377)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHH
Confidence 3445666777789999999998888888899999999988874
No 154
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=63.58 E-value=7.8 Score=37.18 Aligned_cols=44 Identities=18% Similarity=0.378 Sum_probs=39.0
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.++...+.+.+...|+.||++|........++++.|||++|-..
T Consensus 74 EDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 74 EDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 45667888999999999999999999999999999999998654
No 155
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=61.35 E-value=9.6 Score=31.55 Aligned_cols=69 Identities=41% Similarity=0.609 Sum_probs=48.6
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+..|...|+.-++|.+.... .........+.......|+++++++.........++++||+..+++.
T Consensus 20 g~v~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 88 (256)
T cd05039 20 GDVMLGDYRGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88 (256)
T ss_pred ceEEEEEecCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHH
Confidence 3456666667766666664221 12234455666777788999999998887788899999999988764
No 156
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=60.86 E-value=8.9 Score=35.34 Aligned_cols=50 Identities=28% Similarity=0.450 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhh--cCCCCeEEEEecCCCCCCCccccccc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKVSMPITPFLTL 280 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~--~~~~~l~~~~e~~~~g~l~~t~l~~a 280 (294)
.-+..+.++.+..|++||++.... ..+..+++++||+.+|...++|=..+
T Consensus 154 kv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~ 205 (576)
T KOG0585|consen 154 KVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP 205 (576)
T ss_pred HHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc
Confidence 345678888889999999998665 34457999999999999887775443
No 157
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=60.84 E-value=13 Score=30.92 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=47.2
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .|..-+++.+.................+......+|+++++++.....+...++++||...+++.
T Consensus 17 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 90 (267)
T cd08229 17 EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS 90 (267)
T ss_pred EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHH
Confidence 3444442 34455555443222222222334556677777889999999998888888899999999888764
No 158
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=59.93 E-value=11 Score=31.46 Aligned_cols=43 Identities=30% Similarity=0.483 Sum_probs=35.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++......+...++++||+..|++.
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALD 94 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHH
Confidence 3445666666778999999998888888899999999999875
No 159
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=59.46 E-value=8.2 Score=34.05 Aligned_cols=63 Identities=19% Similarity=0.303 Sum_probs=45.5
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..=.+|.|-+...........-.....+.....|+.||++.-+......+++++||+.+|.|.
T Consensus 51 kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf 113 (357)
T KOG0598|consen 51 KIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELF 113 (357)
T ss_pred ceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHH
Confidence 344566665433222222333345667777899999999999999999999999999999875
No 160
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=59.45 E-value=4.6 Score=36.13 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=36.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+.....|+.|+++......+..+++++||+..|++.
T Consensus 47 ~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (382)
T cd05625 47 HVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMM 89 (382)
T ss_pred HHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 4456677778889999999998888888899999999998764
No 161
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=59.31 E-value=11 Score=31.41 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=35.8
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..............|+++++++.........++++||...+++.
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (262)
T cd05572 38 EHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELW 81 (262)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHH
Confidence 34455666777789999999998888888899999999888774
No 162
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=59.15 E-value=15 Score=30.77 Aligned_cols=42 Identities=24% Similarity=0.438 Sum_probs=34.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|++|++++..+......++++||+..|++.
T Consensus 42 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 83 (269)
T cd05087 42 FLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLK 83 (269)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHH
Confidence 344566677789999999998888888899999999988874
No 163
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=59.04 E-value=5.5 Score=34.70 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=33.9
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.......|++|+++.........+++++||+..|++.
T Consensus 43 ~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~ 83 (323)
T cd05595 43 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 83 (323)
T ss_pred HHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHH
Confidence 34556667778999999998888888899999999999874
No 164
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=58.38 E-value=12 Score=35.44 Aligned_cols=69 Identities=20% Similarity=0.399 Sum_probs=46.9
Q ss_pred ceeeeeecCchhhh--HhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 202 SYQVAKWNGTKVWV--KILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 202 ~l~~A~~~g~~~~v--~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
-.+.+-+.+..++| +..-+.+ ......+.-.....+.....|++||+++.+...+..+++++||+.. +|
T Consensus 17 ~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L 87 (808)
T KOG0597|consen 17 RVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DL 87 (808)
T ss_pred eeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hH
Confidence 34444444444443 3333333 3333334456778888999999999999999999999999999854 44
No 165
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=58.25 E-value=6 Score=34.58 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=33.9
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...........|+.|+++......+..+++++||+.+|++.
T Consensus 43 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~ 83 (328)
T cd05593 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELF 83 (328)
T ss_pred HHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHH
Confidence 34556667778999999988888888899999999998874
No 166
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=57.81 E-value=15 Score=32.14 Aligned_cols=44 Identities=25% Similarity=0.373 Sum_probs=36.7
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++|++++..+..+..+++++||+..|+|.
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (333)
T cd06650 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 91 (333)
T ss_pred HHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHH
Confidence 33456677777889999999998888888899999999998875
No 167
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=57.81 E-value=11 Score=34.91 Aligned_cols=43 Identities=14% Similarity=0.272 Sum_probs=37.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|+|.
T Consensus 111 ~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~ 153 (478)
T PTZ00267 111 YARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLN 153 (478)
T ss_pred HHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHH
Confidence 4456778888889999999999888888999999999999985
No 168
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=57.23 E-value=11 Score=33.08 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=35.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.............|+.|+++......+...++++||+..|++.
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (350)
T cd05573 47 HVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLM 89 (350)
T ss_pred HHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHH
Confidence 3445666777788999999998888888899999999888764
No 169
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=57.12 E-value=5.2 Score=34.96 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+.|++++.........++++||+..|++.
T Consensus 47 ~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (333)
T cd05600 47 HVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFR 89 (333)
T ss_pred HHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHH
Confidence 3445666777778999999998888888899999999988875
No 170
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=56.83 E-value=8 Score=37.09 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=36.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
+..-++.++..+.-||++..+...+..++++|||.++|++
T Consensus 677 KAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDm 716 (1034)
T KOG0608|consen 677 KAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDM 716 (1034)
T ss_pred hhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccH
Confidence 4567788999999999999999999999999999999986
No 171
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=56.63 E-value=5.8 Score=35.50 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=36.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+....+|+.|+++.........+++++||+..|++.
T Consensus 47 ~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~ 89 (381)
T cd05626 47 HVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM 89 (381)
T ss_pred HHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHH
Confidence 4456667777889999999998888888899999999998864
No 172
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=55.97 E-value=2.2 Score=39.32 Aligned_cols=90 Identities=20% Similarity=0.062 Sum_probs=67.7
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCcHHHHHHH---cCcHHHHHHHHhCCCCCCCCCCCCCCH---H
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNEG-SDVNSIDLDGRTALHIAAC---EGHVEVVKLLLSKKANIDARDRWGSTA---A 142 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g-~~~~~~~~~g~TpLh~A~~---~g~~~~v~~Ll~~gad~~~~~~~g~t~---L 142 (294)
.+.+|||.+|+..|.++++.+++.-+ .++|-...+|.. |.++. .|..+.+..|...++..+..|..|.-+ +
T Consensus 56 ~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~ 133 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVL 133 (528)
T ss_pred hccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccccccCccccCCCcccCcc
Confidence 35689999999999999999999776 677877777777 55544 466788888999999888888767654 5
Q ss_pred HHHHHcC---CHHHHHHHHHCC
Q 022605 143 ADAKYYG---NVEVYNILKARG 161 (294)
Q Consensus 143 ~~A~~~g---~~~~v~~Ll~~g 161 (294)
|.|...+ ...+++-|++.+
T Consensus 134 ~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 134 HCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cccccCCccccccHHHHHHhcc
Confidence 5555443 345677777765
No 173
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=55.96 E-value=10 Score=36.38 Aligned_cols=47 Identities=26% Similarity=0.586 Sum_probs=36.3
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+.....+.....+.....|++||++++.|... ++|++||..+.|.|+
T Consensus 432 ~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr 478 (974)
T KOG4257|consen 432 PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELR 478 (974)
T ss_pred hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHH
Confidence 33344555555666777999999999988754 799999999998876
No 174
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=55.66 E-value=26 Score=29.40 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=46.1
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |..-++|.+....... .........+.......|+++++++.........++++||+..+.+.
T Consensus 16 ~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 88 (286)
T cd07846 16 MVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLD 88 (286)
T ss_pred EEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHH
Confidence 34455443 4455566554332221 22223345566677788999999999998888899999999876654
No 175
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=55.44 E-value=6.4 Score=34.02 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=33.8
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|++|+++.........+++++||+..|++.
T Consensus 41 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 81 (312)
T cd05585 41 LAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELF 81 (312)
T ss_pred HHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHH
Confidence 34555666779999999988888888899999999988874
No 176
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=55.35 E-value=5.3 Score=35.59 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=34.5
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.+....+|+.|++++.....+..+++++||+..|++.
T Consensus 49 ~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~ 89 (376)
T cd05598 49 KAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM 89 (376)
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 35566777789999999998888888899999999998875
No 177
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=54.85 E-value=15 Score=33.30 Aligned_cols=42 Identities=31% Similarity=0.491 Sum_probs=34.4
Q ss_pred hhhHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+ |++|++++..+......++++||+..|+|.
T Consensus 87 ~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~ 129 (401)
T cd05107 87 LMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLV 129 (401)
T ss_pred HHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHH
Confidence 445566666665 999999999888888899999999999875
No 178
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=54.69 E-value=16 Score=37.39 Aligned_cols=64 Identities=19% Similarity=0.160 Sum_probs=45.2
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+.+=++|.|-+.-...-.....++..-++.+..+..-|+.+..+...+..++++|||+++|++-
T Consensus 100 ~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDll 163 (1317)
T KOG0612|consen 100 EKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLL 163 (1317)
T ss_pred ccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHH
Confidence 4555666664211111111234667778888888889999998889899999999999999963
No 179
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=54.51 E-value=6 Score=37.91 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=47.7
Q ss_pred eecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 207 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
+..|+..+||.+-............-...+-+..--.|++++.++........++++.||+++|.|.+
T Consensus 34 ~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFd 101 (786)
T KOG0588|consen 34 AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFD 101 (786)
T ss_pred ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHH
Confidence 45577778877653321111111222345556666799999999999999999999999999999763
No 180
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=54.13 E-value=15 Score=32.02 Aligned_cols=44 Identities=25% Similarity=0.373 Sum_probs=37.2
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++|++++.....+..+++++||+..|+|.
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (331)
T cd06649 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 91 (331)
T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHH
Confidence 34556777788889999999998888888899999999988875
No 181
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=53.45 E-value=15 Score=30.71 Aligned_cols=43 Identities=26% Similarity=0.487 Sum_probs=35.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.............|+++++++..+......++++||+..|+|.
T Consensus 41 ~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 83 (268)
T cd05086 41 EFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLK 83 (268)
T ss_pred HHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHH
Confidence 4445556666779999999999888888899999999988874
No 182
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=53.20 E-value=7.1 Score=33.97 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=34.0
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.......|+.|+++.........+++++||+..|++.
T Consensus 43 ~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 83 (323)
T cd05571 43 LTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELF 83 (323)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 34566677779999999988888888899999999998874
No 183
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=53.07 E-value=8 Score=32.75 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=32.9
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.+.....|+.|+++..........++++||+..|++.
T Consensus 42 ~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~ 81 (280)
T cd05608 42 VEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLR 81 (280)
T ss_pred HHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHH
Confidence 4555666778999999988877778899999999998874
No 184
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=53.03 E-value=9.1 Score=32.52 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=33.3
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+......+|++|+.+.........+++++||+..|++.
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (285)
T cd05605 49 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 88 (285)
T ss_pred HHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHH
Confidence 4556666778999999998887778899999999998874
No 185
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=53.02 E-value=6.2 Score=34.48 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=34.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|++|++++.....+...++++||+..|++.
T Consensus 65 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 106 (329)
T PTZ00263 65 VAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELF 106 (329)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHH
Confidence 345566677789999999998888888899999999988864
No 186
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=52.30 E-value=26 Score=29.18 Aligned_cols=43 Identities=35% Similarity=0.634 Sum_probs=35.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+...+.......|+++++++.........++++||+..|++.
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 93 (266)
T cd05033 51 DFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLD 93 (266)
T ss_pred HHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHH
Confidence 4455666777889999999998888888899999999988765
No 187
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=52.23 E-value=19 Score=29.79 Aligned_cols=43 Identities=23% Similarity=0.470 Sum_probs=35.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+.++++......+...++++||+..|++.
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLS 90 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHH
Confidence 3445666777789999999999888888899999999988874
No 188
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=52.17 E-value=27 Score=28.73 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=34.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++..........++++||+..+++.
T Consensus 40 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (265)
T cd05579 40 VLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLA 81 (265)
T ss_pred HHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHH
Confidence 344556677778999999998888888899999999887763
No 189
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=52.03 E-value=12 Score=33.97 Aligned_cols=43 Identities=33% Similarity=0.487 Sum_probs=35.1
Q ss_pred hhhhHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+ |++|++++..+......++++||+.+|+|.
T Consensus 86 ~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~ 129 (400)
T cd05105 86 ALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLV 129 (400)
T ss_pred HHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHH
Confidence 3445666666664 999999999998888999999999999874
No 190
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=51.90 E-value=18 Score=30.08 Aligned_cols=43 Identities=30% Similarity=0.491 Sum_probs=34.8
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|+++...+......++++||+..|++.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd05113 45 EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87 (256)
T ss_pred HHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence 3455666777789999999998888788899999999887654
No 191
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=51.88 E-value=9.6 Score=33.15 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+....+|++|+++......+...++++||+..|++.
T Consensus 45 ~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (327)
T cd08227 45 FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 87 (327)
T ss_pred HHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHH
Confidence 3445667777789999999998888888999999999988765
No 192
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=51.81 E-value=13 Score=35.89 Aligned_cols=62 Identities=27% Similarity=0.472 Sum_probs=42.6
Q ss_pred cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.|.++.+|..--...++..... ..+.....-.|++|+-|+++.-....+++.|||+..|++-
T Consensus 39 s~elaavkvVkLep~dd~~~iq---qei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ 100 (829)
T KOG0576|consen 39 SGELAAVKVVKLEPGDDFSGIQ---QEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ 100 (829)
T ss_pred cCchhhheeeeccCCccccccc---cceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence 4555566655323333333222 2333444568999999999999999999999999999874
No 193
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=51.80 E-value=6.5 Score=34.90 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=34.1
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+....+|+.|++++........+++++||+..|++.
T Consensus 49 ~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (363)
T cd05628 49 RAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMM 89 (363)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHH
Confidence 44556677789999999998888888899999999988764
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=51.78 E-value=18 Score=31.09 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=36.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|++++..+..+...++++||+.+++|.
T Consensus 45 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~ 87 (308)
T cd06615 45 QIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 87 (308)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHH
Confidence 3445677777889999999999888888999999999988874
No 195
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=51.76 E-value=8.1 Score=33.64 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=34.8
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......+....+|+.|+++..........++++||+..|++.
T Consensus 47 ~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (330)
T cd05601 47 FFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLL 89 (330)
T ss_pred HHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHH
Confidence 3445566677789999999988877778899999999988765
No 196
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=51.72 E-value=6.2 Score=34.94 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=35.0
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+....+|+.|+++......+..+++++||+..|+|.
T Consensus 48 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~ 89 (364)
T cd05599 48 VRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMM 89 (364)
T ss_pred HHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHH
Confidence 345666777788999999998888888899999999988774
No 197
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=51.63 E-value=34 Score=27.93 Aligned_cols=43 Identities=23% Similarity=0.301 Sum_probs=35.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+.+++++.....+...++++|++..+++.
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 81 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELF 81 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHH
Confidence 4455666777888999999998888888899999999877664
No 198
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=51.63 E-value=14 Score=33.71 Aligned_cols=71 Identities=25% Similarity=0.375 Sum_probs=52.6
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC----CCeEEEEecCCCCCCCcc
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN----IPMMIVLEYHAKVSMPIT 275 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~----~~l~~~~e~~~~g~l~~t 275 (294)
.-....-|+|.-..||.+-+... ..-...|.+.--....|.+|+.|+.+-..+ ..++++++|...|+|++.
T Consensus 225 GEVwrG~wrGe~VAVKiF~srdE----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~Dy 299 (513)
T KOG2052|consen 225 GEVWRGRWRGEDVAVKIFSSRDE----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDY 299 (513)
T ss_pred cceeeccccCCceEEEEecccch----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHH
Confidence 45677788888889998864321 112234777777888999999999765433 568999999999999853
No 199
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=51.47 E-value=29 Score=30.52 Aligned_cols=63 Identities=21% Similarity=0.296 Sum_probs=44.2
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
|..-++|.+... ............+.......|.+|+++.........+++++||+..|++..
T Consensus 99 ~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 161 (353)
T PLN00034 99 GRLYALKVIYGN--HEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG 161 (353)
T ss_pred CCEEEEEEEecC--CcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence 444455555322 122223344567777888899999999988888888999999999988753
No 200
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=51.38 E-value=22 Score=29.55 Aligned_cols=42 Identities=29% Similarity=0.597 Sum_probs=34.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|+++++++..+..+...++++||+..+++.
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (263)
T cd05052 49 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 90 (263)
T ss_pred HHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHH
Confidence 344555666778999999999888888999999999988775
No 201
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=51.34 E-value=7.3 Score=34.35 Aligned_cols=42 Identities=21% Similarity=0.286 Sum_probs=35.0
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
............|++|+++..........++++||+..|++.
T Consensus 78 ~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~ 119 (340)
T PTZ00426 78 VFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFF 119 (340)
T ss_pred HHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 345566777779999999998888888899999999988864
No 202
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=50.99 E-value=27 Score=29.13 Aligned_cols=41 Identities=29% Similarity=0.540 Sum_probs=33.7
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|++|++++..+......++++||+..|++.
T Consensus 43 ~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~ 83 (269)
T cd05042 43 LQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83 (269)
T ss_pred HHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHH
Confidence 34455556679999999999888888899999999988875
No 203
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=49.98 E-value=8.8 Score=33.40 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=32.8
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........|+.|+++.........+++++||+..|++.
T Consensus 44 ~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~ 83 (325)
T cd05594 44 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 83 (325)
T ss_pred HHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHH
Confidence 4455566778999999988887788899999999998774
No 204
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=49.96 E-value=9.5 Score=33.31 Aligned_cols=40 Identities=20% Similarity=0.337 Sum_probs=31.1
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......... +|+.|+++.........+++++||+..|++.
T Consensus 44 ~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~ 84 (329)
T cd05588 44 TEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLM 84 (329)
T ss_pred HHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHH
Confidence 334444343 7999999998888888899999999998874
No 205
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=49.91 E-value=7.8 Score=34.64 Aligned_cols=42 Identities=29% Similarity=0.342 Sum_probs=35.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+....+|++|++++.....+..+++++||+..|+|.
T Consensus 90 ~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~ 131 (370)
T cd05621 90 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV 131 (370)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 345666777889999999998888888899999999999875
No 206
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=49.63 E-value=8.5 Score=33.63 Aligned_cols=42 Identities=12% Similarity=0.206 Sum_probs=34.8
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+....+|+.|+.+......+..+++++||+..|+|.
T Consensus 48 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (331)
T cd05597 48 FREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLL 89 (331)
T ss_pred HHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHH
Confidence 445666777789999999998888888899999999988874
No 207
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=49.61 E-value=46 Score=29.36 Aligned_cols=65 Identities=22% Similarity=0.286 Sum_probs=44.3
Q ss_pred eeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 206 AKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 206 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
.+..|..-.||.+-+..+ .....-++..-.+-...||.+|++++.....+...++++|-+..|++
T Consensus 99 ~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 99 SIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred eeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 345566666776543322 12222233333344568999999999999999999999999999876
No 208
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=49.51 E-value=28 Score=30.35 Aligned_cols=42 Identities=33% Similarity=0.569 Sum_probs=31.3
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcC-CCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQ-NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~-~~~l~~~~e~~~~g~l~ 273 (294)
....+...... .|++|++++..+.. +..+++++||+.+|+|.
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~ 100 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLS 100 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHH
Confidence 34455555555 79999999976654 34588999999999885
No 209
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=49.14 E-value=15 Score=30.92 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=34.3
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.....|++|+++...+..+...++++||+.+|++.
T Consensus 63 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~ 104 (274)
T cd05076 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLD 104 (274)
T ss_pred HHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHH
Confidence 344455666778999999999888888899999999998763
No 210
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=48.70 E-value=15 Score=31.42 Aligned_cols=43 Identities=21% Similarity=0.570 Sum_probs=35.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 65 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (304)
T cd05096 65 DFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLN 107 (304)
T ss_pred HHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHH
Confidence 4445666777789999999998888888899999999998875
No 211
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=48.60 E-value=4.5 Score=38.04 Aligned_cols=53 Identities=32% Similarity=0.373 Sum_probs=38.4
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q 022605 79 MACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANI 131 (294)
Q Consensus 79 Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~ 131 (294)
|+..+....+-.|++.++.++..|..|.||+|+++..|..++.+.++....+.
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~ 455 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAI 455 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhh
Confidence 55556666666677777777777888888888888888888888777654333
No 212
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=48.24 E-value=40 Score=28.21 Aligned_cols=44 Identities=18% Similarity=0.422 Sum_probs=36.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++++++......+...++++||+..+++.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (277)
T cd06642 47 EDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSAL 90 (277)
T ss_pred HHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHH
Confidence 34456667777889999999999888888899999999988763
No 213
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=47.80 E-value=32 Score=28.26 Aligned_cols=44 Identities=32% Similarity=0.551 Sum_probs=35.4
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++..+......++++||+..+++.
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 38 AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 34455666677789999999998888888899999999888764
No 214
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=46.75 E-value=13 Score=32.48 Aligned_cols=40 Identities=20% Similarity=0.349 Sum_probs=31.3
Q ss_pred hHHHHHHH-cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~-~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
........ .+|+.|+++..........++++||+..|++.
T Consensus 44 ~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~ 84 (329)
T cd05618 44 TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 84 (329)
T ss_pred HHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHH
Confidence 34444433 38999999998887788899999999988874
No 215
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=46.71 E-value=24 Score=29.71 Aligned_cols=44 Identities=25% Similarity=0.436 Sum_probs=36.6
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++++++..........++++||+..|++.
T Consensus 48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (284)
T cd06620 48 KQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLD 91 (284)
T ss_pred HHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHH
Confidence 34456677777789999999998888888899999999988874
No 216
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=46.30 E-value=9.7 Score=33.97 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=34.0
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........+|+.|+++..........++++||+.+|++.
T Consensus 91 ~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~ 131 (370)
T cd05596 91 WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLV 131 (370)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHH
Confidence 34566677789999999998777777899999999999875
No 217
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=45.73 E-value=11 Score=35.58 Aligned_cols=43 Identities=30% Similarity=0.413 Sum_probs=37.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.-...+.+=....|++||++......+..++++.|+|.+|++-
T Consensus 64 Kv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~ 106 (592)
T KOG0575|consen 64 KVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLM 106 (592)
T ss_pred HHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHH
Confidence 3345677778889999999999999999999999999999864
No 218
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=45.60 E-value=31 Score=28.44 Aligned_cols=42 Identities=33% Similarity=0.551 Sum_probs=35.3
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++...+......++++||+..|++.
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 46 FIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred HHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 445666777789999999998888888899999999988775
No 219
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=45.53 E-value=35 Score=28.38 Aligned_cols=44 Identities=30% Similarity=0.591 Sum_probs=36.1
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...........|+++++++.....+...++++||+..|++.
T Consensus 50 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T cd05065 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALD 93 (269)
T ss_pred HHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHH
Confidence 44556667777789999999998888888899999999888764
No 220
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=45.46 E-value=28 Score=34.11 Aligned_cols=48 Identities=27% Similarity=0.364 Sum_probs=37.3
Q ss_pred hHhhhhhhhHHHHH----HHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 226 PERINAFTHELTIV----EKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 226 ~~~~~~~~t~l~~a----~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+.++.....|||-- ....|.+||+||++++.+.-+-+-||..++|+|.
T Consensus 609 pekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 609 PEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred ccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 34444555666643 3458999999999999999889999999999975
No 221
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=45.32 E-value=18 Score=32.99 Aligned_cols=41 Identities=24% Similarity=0.508 Sum_probs=35.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCC-eEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIP-MMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~-l~~~~e~~~~g~l~ 273 (294)
.....+..+..|++||.|....-.+.. +.++|+|+.+|++.
T Consensus 51 ~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~ 92 (426)
T KOG0589|consen 51 IQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLA 92 (426)
T ss_pred HHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHH
Confidence 455667777899999999999988888 89999999999875
No 222
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=45.17 E-value=34 Score=28.25 Aligned_cols=43 Identities=21% Similarity=0.411 Sum_probs=35.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++..........++++||+..|++.
T Consensus 48 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (261)
T cd05148 48 DFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL 90 (261)
T ss_pred HHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence 3445666667778999999998888888899999999988764
No 223
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=45.04 E-value=41 Score=31.54 Aligned_cols=25 Identities=12% Similarity=-0.036 Sum_probs=13.2
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLL 92 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll 92 (294)
....+.++.+.+...|....+....
T Consensus 51 ~~s~~~~~~~l~~~~g~~~~~~~a~ 75 (503)
T KOG0513|consen 51 GVSLAYLELRLQNIDGDPSAARLAD 75 (503)
T ss_pred hhhhcccHHHHHhccCChHhhHhhh
Confidence 3444555555555555555444443
No 224
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=44.88 E-value=15 Score=31.25 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..+++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 89 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELF 89 (290)
T ss_pred HHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHH
Confidence 3445666677778999999998888888899999999888764
No 225
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=44.55 E-value=22 Score=29.31 Aligned_cols=41 Identities=22% Similarity=0.254 Sum_probs=32.3
Q ss_pred HHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q 022605 91 LLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANI 131 (294)
Q Consensus 91 Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~ 131 (294)
|++.|+.-|..|....||=-+|...++.+.-+.|++.|+.-
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 45777777888888888888888888888888888887643
No 226
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=44.24 E-value=36 Score=27.89 Aligned_cols=43 Identities=33% Similarity=0.555 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++...+......++++||+..+++.
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3445666777789999999998888888899999999888764
No 227
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=44.02 E-value=22 Score=29.33 Aligned_cols=44 Identities=18% Similarity=0.400 Sum_probs=36.6
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|+++++++........+++++||+..|++.
T Consensus 44 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~ 87 (256)
T cd08221 44 RDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLY 87 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHH
Confidence 34456677778889999999998888888899999999988775
No 228
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=43.76 E-value=11 Score=33.77 Aligned_cols=41 Identities=27% Similarity=0.275 Sum_probs=34.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........+|+.|++++........+++++||+..|+|.
T Consensus 91 ~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~ 131 (371)
T cd05622 91 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 131 (371)
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 45566777789999999998887778899999999998874
No 229
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=43.62 E-value=18 Score=36.83 Aligned_cols=38 Identities=21% Similarity=0.445 Sum_probs=33.1
Q ss_pred HHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 236 l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+....+.+|++||+++..+......++++||+.+|++.
T Consensus 734 ~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~ 771 (968)
T PLN00113 734 IADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS 771 (968)
T ss_pred HHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHH
Confidence 45566779999999999998888899999999999875
No 230
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=43.47 E-value=27 Score=29.34 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=36.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++++++......+...++++||+..+++.
T Consensus 47 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~ 90 (277)
T cd06641 47 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL 90 (277)
T ss_pred HHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHH
Confidence 34456677778889999999998888888899999999887765
No 231
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=43.35 E-value=10 Score=33.59 Aligned_cols=41 Identities=17% Similarity=0.204 Sum_probs=33.9
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...........|+.+++++........+++++||++.|++.
T Consensus 49 ~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (360)
T cd05627 49 RAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMM 89 (360)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHH
Confidence 34556667778999999998888888899999999988764
No 232
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=43.34 E-value=32 Score=33.33 Aligned_cols=63 Identities=29% Similarity=0.418 Sum_probs=44.9
Q ss_pred cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC------CCeEEEEecCCCCCCC
Q 022605 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN------IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~------~~l~~~~e~~~~g~l~ 273 (294)
.|..-+||..-... .....+.....+.+..+.+|++||+++..-... ....++||||..|++.
T Consensus 37 tG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~ 105 (732)
T KOG4250|consen 37 TGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLR 105 (732)
T ss_pred cccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHH
Confidence 45666777765443 223334556899999999999999999664332 2457889999999986
No 233
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=43.26 E-value=24 Score=34.51 Aligned_cols=71 Identities=13% Similarity=0.180 Sum_probs=46.2
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
++.|... |...++|.+.................+.......|+.|++++........+++++||+..++|.
T Consensus 20 Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~ 92 (669)
T cd05610 20 VYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVK 92 (669)
T ss_pred EEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHH
Confidence 4444443 4444555553222222222334456667777789999999998777777899999999888764
No 234
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=43.23 E-value=65 Score=27.04 Aligned_cols=43 Identities=30% Similarity=0.423 Sum_probs=35.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++.....+...++++||+..+++.
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (286)
T cd06622 45 QIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLD 87 (286)
T ss_pred HHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHH
Confidence 3445666677789999999999888888999999999888763
No 235
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=43.15 E-value=17 Score=32.52 Aligned_cols=42 Identities=26% Similarity=0.445 Sum_probs=34.3
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+...... .|++|++++..+......++++||+..|+|.
T Consensus 85 ~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~ 127 (375)
T cd05104 85 LMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLL 127 (375)
T ss_pred HHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHH
Confidence 34455555555 7999999999988888999999999999874
No 236
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=42.80 E-value=13 Score=31.64 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=34.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.......|+.++.++.....+...++++||+..|++.
T Consensus 48 ~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 88 (285)
T cd05631 48 LNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLK 88 (285)
T ss_pred HHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHH
Confidence 35666777789999999998888888899999999999874
No 237
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=42.63 E-value=30 Score=28.67 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=33.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
............|++++++......+...++++||+..|++.
T Consensus 46 ~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 87 (258)
T cd05078 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLD 87 (258)
T ss_pred HHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHH
Confidence 344555666778999999998888878899999999988764
No 238
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=42.43 E-value=20 Score=29.72 Aligned_cols=44 Identities=20% Similarity=0.464 Sum_probs=35.5
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++++++..........++++||+..|++.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 90 (267)
T cd08228 47 QDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLS 90 (267)
T ss_pred HHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHH
Confidence 34455667777889999999998877777889999999988764
No 239
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=42.18 E-value=46 Score=27.66 Aligned_cols=43 Identities=23% Similarity=0.363 Sum_probs=35.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|++++.........++++||+..+++.
T Consensus 51 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 51 PLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred HHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 3445566777789999999998888888899999999988875
No 240
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=41.93 E-value=19 Score=31.56 Aligned_cols=62 Identities=27% Similarity=0.469 Sum_probs=41.8
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC--CeEEEEecCCCCCCCc
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI--PMMIVLEYHAKVSMPI 274 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~--~l~~~~e~~~~g~l~~ 274 (294)
|...+||..... .... .+.-...+.+..+..|+.||++.+...... .+.+.+||++.|++..
T Consensus 42 g~~~AvK~v~~~--~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~ 105 (313)
T KOG0198|consen 42 GELMAVKSVELE--DSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSD 105 (313)
T ss_pred Ccceeeeeeecc--cchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHH
Confidence 455556555422 1111 233456677788888999999999744444 5899999999999863
No 241
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=41.56 E-value=38 Score=28.41 Aligned_cols=43 Identities=30% Similarity=0.493 Sum_probs=34.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|++++.........++++||+..+++.
T Consensus 55 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 97 (277)
T cd05036 55 DFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLK 97 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHH
Confidence 3444556667789999999998777777889999999888876
No 242
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=41.52 E-value=59 Score=28.48 Aligned_cols=42 Identities=31% Similarity=0.535 Sum_probs=30.6
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcC-CCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQ-NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~-~~~l~~~~e~~~~g~l~ 273 (294)
....+...... +|++|++++..+.. ...+++++||+..|++.
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~ 100 (343)
T cd05103 57 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 100 (343)
T ss_pred HHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHH
Confidence 33455555555 67999999987643 45678999999999875
No 243
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=41.34 E-value=35 Score=28.82 Aligned_cols=42 Identities=26% Similarity=0.585 Sum_probs=33.6
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+....+. +|++|+++...+..+...++++||+..|++.
T Consensus 62 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~ 104 (293)
T cd05053 62 LVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLR 104 (293)
T ss_pred HHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHH
Confidence 33455555555 7999999998888888899999999998765
No 244
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=41.19 E-value=28 Score=34.22 Aligned_cols=49 Identities=24% Similarity=0.454 Sum_probs=34.2
Q ss_pred ChHhhhhhhhHHHHHHHc-CCCchhhhhhh-h------cCCCCeEEEEecCCCCCCC
Q 022605 225 DPERINAFTHELTIVEKA-RHPNVVQFVGA-V------TQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~-~~~~iv~~L~~-~------~~~~~l~~~~e~~~~g~l~ 273 (294)
+....+.-...+.++... ||++||.|+.+ . +...+.++.||||.+|.|-
T Consensus 74 de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lv 130 (738)
T KOG1989|consen 74 DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLV 130 (738)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHH
Confidence 444445556677776665 79999999983 2 1124689999999988753
No 245
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=40.92 E-value=44 Score=28.59 Aligned_cols=44 Identities=18% Similarity=0.310 Sum_probs=35.7
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++|+++......+...++++||+..|++.
T Consensus 44 ~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 44 KLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred HHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 34456666777778999999998888888899999999988764
No 246
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=40.10 E-value=44 Score=27.61 Aligned_cols=43 Identities=33% Similarity=0.529 Sum_probs=34.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++..........++++||+.+|++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05072 47 AFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLL 89 (261)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHH
Confidence 3445666777789999999988877778889999999988764
No 247
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=39.91 E-value=26 Score=29.56 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=32.7
Q ss_pred HHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 235 ~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.+..+.+|++|+++......+...++++||+..|++.
T Consensus 43 E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 81 (277)
T cd05607 43 EKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLK 81 (277)
T ss_pred HHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHH
Confidence 455667779999999988887788899999999988874
No 248
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=39.73 E-value=13 Score=32.46 Aligned_cols=41 Identities=10% Similarity=0.125 Sum_probs=33.2
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...........|+.|+.+..........++++||+..|+|.
T Consensus 49 ~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~ 89 (331)
T cd05624 49 REERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLL 89 (331)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 34455566778999999988887788899999999998875
No 249
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=39.70 E-value=26 Score=29.58 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=33.3
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
...+.......|++|++++.....+...++++||+..+.+
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l 87 (287)
T cd07848 48 LRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNML 87 (287)
T ss_pred HHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHH
Confidence 4566677778999999999888888889999999987644
No 250
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=39.64 E-value=37 Score=28.47 Aligned_cols=44 Identities=20% Similarity=0.425 Sum_probs=36.7
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|+.++++......+...++++||+..|++.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (277)
T cd06640 47 EDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSAL 90 (277)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHH
Confidence 34456667777789999999999888888899999999998865
No 251
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=39.50 E-value=38 Score=28.49 Aligned_cols=44 Identities=25% Similarity=0.345 Sum_probs=35.9
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|+++++++.....+....+++||+..+++.
T Consensus 44 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (279)
T cd06619 44 KQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLD 87 (279)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChH
Confidence 34445666777789999999999888888899999999988764
No 252
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=39.41 E-value=54 Score=27.42 Aligned_cols=44 Identities=27% Similarity=0.570 Sum_probs=36.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|+++++++.........++++||+..|++.
T Consensus 53 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~ 96 (283)
T cd05048 53 QEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLH 96 (283)
T ss_pred HHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHH
Confidence 34556677777889999999998888778899999999988864
No 253
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=39.01 E-value=24 Score=33.16 Aligned_cols=39 Identities=23% Similarity=0.381 Sum_probs=33.3
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+..|+... +|+-|+++.--......+++++||.++|+|.
T Consensus 124 k~~l~~L~--~hPgivkLy~TFQD~~sLYFvLe~A~nGdll 162 (604)
T KOG0592|consen 124 KEALTQLS--GHPGIVKLYFTFQDEESLYFVLEYAPNGDLL 162 (604)
T ss_pred HHHHHHhh--CCCCeEEEEEEeecccceEEEEEecCCCcHH
Confidence 45666554 9999999998888889999999999999986
No 254
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=38.66 E-value=24 Score=28.51 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=33.3
Q ss_pred CCcHHHHHHHcCcHHHHH-HHHhCCCC----CCCCCCCCCCHHHHHHHc
Q 022605 105 GRTALHIAACEGHVEVVK-LLLSKKAN----IDARDRWGSTAAADAKYY 148 (294)
Q Consensus 105 g~TpLh~A~~~g~~~~v~-~Ll~~gad----~~~~~~~g~t~L~~A~~~ 148 (294)
-..|||-|+.-+..+++- |+++..+. .|..|.+|..+|.+|...
T Consensus 222 Te~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 222 TENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred CcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 346999999988888776 67776554 466788899999888654
No 255
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=38.65 E-value=26 Score=29.65 Aligned_cols=44 Identities=25% Similarity=0.581 Sum_probs=36.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
.....+.......|++|++++..+..+...++++||+..|++..
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (290)
T cd05045 49 DLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92 (290)
T ss_pred HHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHH
Confidence 44566777788899999999988888888999999999888753
No 256
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=38.51 E-value=34 Score=28.50 Aligned_cols=43 Identities=37% Similarity=0.637 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|+++......+...++++||+..+++.
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (267)
T cd05066 51 DFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 93 (267)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 4455666777779999999998877778899999999988764
No 257
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=38.18 E-value=57 Score=27.53 Aligned_cols=44 Identities=20% Similarity=0.434 Sum_probs=35.4
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++++++......+...++++||+..+++.
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 97 (292)
T cd06644 54 EDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVD 97 (292)
T ss_pred HHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHH
Confidence 34445666677889999999998888888899999999988753
No 258
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=37.89 E-value=42 Score=28.11 Aligned_cols=43 Identities=21% Similarity=0.492 Sum_probs=35.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+..+...+|++|++++..+......++++||+..|++.
T Consensus 55 ~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 97 (277)
T cd05062 55 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 97 (277)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHH
Confidence 3445566777789999999998888778899999999988764
No 259
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=37.67 E-value=38 Score=28.01 Aligned_cols=42 Identities=33% Similarity=0.466 Sum_probs=34.3
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++..........++++||+..+++.
T Consensus 48 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05068 48 FLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLL 89 (261)
T ss_pred HHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHH
Confidence 445566777778999999998888888899999999888775
No 260
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=37.55 E-value=19 Score=30.89 Aligned_cols=41 Identities=22% Similarity=0.235 Sum_probs=33.5
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|++|++++.....+...++++||+..+++.
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (305)
T cd05609 49 FVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCA 89 (305)
T ss_pred HHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHH
Confidence 34556677789999999998877777889999999988764
No 261
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=37.31 E-value=25 Score=35.62 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=45.3
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+.................+.......|++|++++..+..+...+++|||+.+|++.
T Consensus 27 g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~ 90 (932)
T PRK13184 27 SRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLK 90 (932)
T ss_pred CcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHH
Confidence 4444556554332223333344556777888889999999998888788899999999998875
No 262
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=37.27 E-value=22 Score=30.11 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=33.3
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.+....+|.+++.++.....+...++++||+..|++.
T Consensus 49 ~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 88 (285)
T cd05630 49 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 88 (285)
T ss_pred HHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHH
Confidence 3455667778999999998888888899999999988874
No 263
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=37.26 E-value=36 Score=31.54 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=41.5
Q ss_pred eecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC-CCchhhhhhhhcCCC-CeEEEEecCCC
Q 022605 207 KWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAVTQNI-PMMIVLEYHAK 269 (294)
Q Consensus 207 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~iv~~L~~~~~~~-~l~~~~e~~~~ 269 (294)
...|...+||.+.++-.......+ -..+....+.. |++||++......+. .+++++|||..
T Consensus 32 ~~~~~~VAIK~MK~Kf~s~ee~~n--LREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~ 94 (538)
T KOG0661|consen 32 KETGELVAIKKMKKKFYSWEECMN--LREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC 94 (538)
T ss_pred cCCCceeeHHHHHhhhccHHHHHH--HHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh
Confidence 345666677777655443222222 24455555666 999999999988877 89999999854
No 264
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=37.04 E-value=33 Score=29.75 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=34.5
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.......|++|++++.....+...++++||+..|++.
T Consensus 48 ~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (323)
T cd05584 48 KAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF 88 (323)
T ss_pred HHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHH
Confidence 45666777889999999998888888899999999988774
No 265
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=36.93 E-value=55 Score=26.81 Aligned_cols=42 Identities=29% Similarity=0.526 Sum_probs=35.0
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|+++++++.....+...++++||+..+++.
T Consensus 46 ~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (257)
T cd08225 46 SKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLM 87 (257)
T ss_pred HHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHH
Confidence 345667777889999999999888888899999999887764
No 266
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=36.80 E-value=25 Score=30.42 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=33.7
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+......+|++|+++......+..+++++||+.+|++.
T Consensus 47 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 86 (318)
T cd05582 47 MERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 86 (318)
T ss_pred HHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 4556677789999999998888888899999999988874
No 267
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=36.73 E-value=35 Score=28.15 Aligned_cols=32 Identities=9% Similarity=-0.021 Sum_probs=22.8
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCC
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSD 97 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~ 97 (294)
+..+....|+=.+|-+.|+....+.|++.|+.
T Consensus 9 n~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 9 NFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 44455666777777788888888888877754
No 268
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=35.78 E-value=49 Score=28.28 Aligned_cols=41 Identities=24% Similarity=0.489 Sum_probs=32.2
Q ss_pred hhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+....+. +|+.++++......+...++++||+.+|++.
T Consensus 55 ~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (303)
T cd05088 55 AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 96 (303)
T ss_pred HHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHH
Confidence 3455555555 8999999998888888899999999888763
No 269
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=35.65 E-value=36 Score=28.53 Aligned_cols=44 Identities=23% Similarity=0.425 Sum_probs=36.4
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|+++++++.....+...++++||+..+++.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd06611 47 EDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD 90 (280)
T ss_pred HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence 34455667777888999999999888888899999999988774
No 270
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=35.42 E-value=42 Score=28.49 Aligned_cols=43 Identities=21% Similarity=0.587 Sum_probs=36.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++..........++++||+..+++.
T Consensus 63 ~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (295)
T cd05097 63 DFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLN 105 (295)
T ss_pred HHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHH
Confidence 3455677778889999999998888888899999999988774
No 271
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=35.27 E-value=54 Score=27.02 Aligned_cols=43 Identities=37% Similarity=0.558 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++++++..........++++||+..+++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 89 (261)
T cd05034 47 AFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLL 89 (261)
T ss_pred HHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHH
Confidence 3445666777788999999998877778899999999888764
No 272
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=35.16 E-value=8.7 Score=38.02 Aligned_cols=58 Identities=17% Similarity=0.262 Sum_probs=41.3
Q ss_pred hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 213 ~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+++.|++... .....+........+..+|++++++|..+..+. ++++++|++.|+|-
T Consensus 728 VaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~Ll 785 (1177)
T KOG1025|consen 728 VAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLL 785 (1177)
T ss_pred eEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHH
Confidence 45666665432 233344444555667889999999999988765 88999999998874
No 273
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=35.07 E-value=48 Score=27.31 Aligned_cols=68 Identities=32% Similarity=0.527 Sum_probs=44.5
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh-cCCCCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV-TQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~-~~~~~l~~~~e~~~~g~l~ 273 (294)
..+..+...|...++|.+... .........+......+|++++++.... ..+...++++||+..|++.
T Consensus 20 ~~v~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (256)
T cd05082 20 GDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88 (256)
T ss_pred CeEEEEEEcCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence 345566666666555554311 1122344567777788999999988754 3445688999999988775
No 274
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=34.99 E-value=42 Score=28.22 Aligned_cols=43 Identities=30% Similarity=0.627 Sum_probs=35.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|+++++++.........++++||+..|++.
T Consensus 53 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (283)
T cd05090 53 EFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLH 95 (283)
T ss_pred HHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHH
Confidence 3445666777789999999998887778899999999988774
No 275
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=34.82 E-value=44 Score=28.22 Aligned_cols=42 Identities=24% Similarity=0.472 Sum_probs=34.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|+++++++.........++++||+..|+|.
T Consensus 56 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~ 97 (288)
T cd05061 56 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLK 97 (288)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHH
Confidence 345566677778999999998877777889999999988875
No 276
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=34.80 E-value=19 Score=32.41 Aligned_cols=41 Identities=24% Similarity=0.511 Sum_probs=33.3
Q ss_pred hHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 234 HELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 234 t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
+.+....... |++|+++.........++++|||+..|+|..
T Consensus 68 rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~ 109 (370)
T KOG0583|consen 68 REISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFD 109 (370)
T ss_pred HHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHH
Confidence 4445555555 9999999999888888999999999988764
No 277
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=34.67 E-value=18 Score=31.53 Aligned_cols=41 Identities=20% Similarity=0.319 Sum_probs=31.1
Q ss_pred hhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......... +|+.|+.+.........+++++||+..|++.
T Consensus 43 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (327)
T cd05617 43 QTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLM 84 (327)
T ss_pred HHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 3444444444 6899999988777777899999999998874
No 278
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=34.47 E-value=19 Score=31.19 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=27.8
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..|+.|+++.........+++++||+..|++.
T Consensus 53 ~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~ 84 (320)
T cd05590 53 RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLM 84 (320)
T ss_pred cCCCchhceeeEEEcCCEEEEEEcCCCCchHH
Confidence 37999999998888888899999999998874
No 279
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=34.42 E-value=34 Score=30.56 Aligned_cols=40 Identities=30% Similarity=0.553 Sum_probs=32.6
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...... +|++|++++..+......++++||+..|++.
T Consensus 90 ~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~ 130 (374)
T cd05106 90 SELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLL 130 (374)
T ss_pred HHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHH
Confidence 344444444 8999999999888888999999999999875
No 280
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=34.17 E-value=47 Score=27.98 Aligned_cols=44 Identities=27% Similarity=0.557 Sum_probs=35.8
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|+++++++..+......++++||+..|++.
T Consensus 53 ~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (288)
T cd05050 53 ADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 96 (288)
T ss_pred HHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHH
Confidence 34455667777889999999998888778899999999988764
No 281
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=33.96 E-value=65 Score=26.26 Aligned_cols=43 Identities=35% Similarity=0.627 Sum_probs=34.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|+.+++++.....+...++++||+..+++.
T Consensus 42 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (262)
T cd00192 42 DFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLL 84 (262)
T ss_pred HHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHH
Confidence 3445556666778999999998888888899999999888765
No 282
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=33.42 E-value=54 Score=28.02 Aligned_cols=43 Identities=30% Similarity=0.517 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+...... +|++|++++..+......++++||+..|++.
T Consensus 84 ~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 127 (302)
T cd05055 84 ALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLL 127 (302)
T ss_pred HHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHH
Confidence 344556666666 7999999998888888899999999988764
No 283
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=33.38 E-value=89 Score=25.89 Aligned_cols=40 Identities=18% Similarity=0.363 Sum_probs=31.4
Q ss_pred hHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......... |++|+++......+...++++|++..+++.
T Consensus 50 ~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd05581 50 IEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELL 90 (280)
T ss_pred HHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHH
Confidence 3344444555 999999998888888899999999888774
No 284
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=33.15 E-value=16 Score=31.83 Aligned_cols=41 Identities=10% Similarity=0.159 Sum_probs=33.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........+|+.|+.+.........+++++||+..|++.
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~ 89 (332)
T cd05623 49 REERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLL 89 (332)
T ss_pred HHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHH
Confidence 34455566778999999988888888899999999999875
No 285
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=32.99 E-value=50 Score=28.02 Aligned_cols=43 Identities=19% Similarity=0.518 Sum_probs=34.8
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.....+...++++||+..|++.
T Consensus 65 ~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (296)
T cd05095 65 DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLN 107 (296)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHH
Confidence 3445566677779999999998887788899999999988774
No 286
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=32.96 E-value=39 Score=28.96 Aligned_cols=43 Identities=14% Similarity=0.232 Sum_probs=34.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+.|++++.........++++||+..+++.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (316)
T cd05574 47 RVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELF 89 (316)
T ss_pred HHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHH
Confidence 3445666777778999999998887778899999999888774
No 287
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=32.94 E-value=57 Score=26.66 Aligned_cols=43 Identities=14% Similarity=0.262 Sum_probs=35.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++.........++++||+.++++.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd08529 45 EAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLH 87 (256)
T ss_pred HHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHH
Confidence 3445566677789999999998888888899999999988764
No 288
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=32.80 E-value=36 Score=27.57 Aligned_cols=42 Identities=14% Similarity=0.051 Sum_probs=30.3
Q ss_pred CCCCCCHHHHHHHcCCHHHH-HHHHHCCCCC-------CCCCCCCccccC
Q 022605 135 DRWGSTAAADAKYYGNVEVY-NILKARGAKV-------PKTKRTPMTVAN 176 (294)
Q Consensus 135 ~~~g~t~L~~A~~~g~~~~v-~~Ll~~ga~~-------~~~~~t~l~~a~ 176 (294)
|.+...|||-|+.-+..+++ -|+++..+.+ |.+|..+|.+|-
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL 268 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIAL 268 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHH
Confidence 44556799999999998876 4667776654 344777777773
No 289
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=32.32 E-value=26 Score=30.38 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=27.9
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+|+.|+++.........+++++||+.+|++.
T Consensus 53 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~ 84 (321)
T cd05591 53 AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLM 84 (321)
T ss_pred cCCCCccceeeEEEcCCeEEEEEeCCCCCcHH
Confidence 47999999998888888899999999988774
No 290
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=31.78 E-value=1.2e+02 Score=25.59 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=34.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|+++++++.........++++||+..+++.
T Consensus 66 ~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 66 LFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred HHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 334555566678999999999988888999999999988764
No 291
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=31.45 E-value=21 Score=32.29 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=45.5
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC-CCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKAR-HPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
|..-.+|.+.+...........-...+.+..... |++||.+.........++++||++.+|.|.+
T Consensus 60 g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd 125 (382)
T KOG0032|consen 60 GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFD 125 (382)
T ss_pred CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHH
Confidence 4455666665443322222233456666666665 9999999999999999999999999998764
No 292
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=31.38 E-value=54 Score=27.70 Aligned_cols=43 Identities=23% Similarity=0.536 Sum_probs=35.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|+++..........++++||+..+++.
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (291)
T cd05094 53 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 95 (291)
T ss_pred HHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHH
Confidence 3445667777889999999998888888899999999988764
No 293
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=31.27 E-value=83 Score=26.07 Aligned_cols=43 Identities=28% Similarity=0.544 Sum_probs=33.0
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|+++++++..+.. ...++++||+..|++.
T Consensus 52 ~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~ 94 (270)
T cd05056 52 EKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELR 94 (270)
T ss_pred HHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHH
Confidence 345566677777899999999876654 5577999999888775
No 294
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=31.05 E-value=63 Score=26.88 Aligned_cols=42 Identities=26% Similarity=0.503 Sum_probs=34.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|++++++..........++++||+..|+|.
T Consensus 56 ~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 97 (277)
T cd05032 56 FLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLK 97 (277)
T ss_pred HHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHH
Confidence 344555666778999999998888888899999999988875
No 295
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=30.98 E-value=63 Score=27.98 Aligned_cols=71 Identities=27% Similarity=0.305 Sum_probs=45.9
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .|..-+++.+... .......+............+|++|+++..........++++||+..+++.
T Consensus 15 ~v~~a~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~ 87 (328)
T cd08226 15 SVYLARHTPTGTLVTVRITDLE-NCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSAN 87 (328)
T ss_pred eEEEEEEcCCCcEEEEEEeccc-cCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHH
Confidence 3455543 3455556655322 122222234445555666678999999998888888899999999888764
No 296
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=30.61 E-value=29 Score=29.08 Aligned_cols=40 Identities=18% Similarity=0.186 Sum_probs=32.8
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.......|+.++++..........++++||+..+++.
T Consensus 42 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLK 81 (277)
T ss_pred HHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHH
Confidence 4556667778999999998888788899999999887764
No 297
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=30.50 E-value=27 Score=30.23 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=27.0
Q ss_pred CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 243 RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 243 ~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.|+.|+++.........+++++||+..|++.
T Consensus 54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (318)
T cd05570 54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLM 84 (318)
T ss_pred CCCCccceeeEEEcCCEEEEEEcCCCCCCHH
Confidence 7999999998877777899999999988764
No 298
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=30.39 E-value=60 Score=27.65 Aligned_cols=42 Identities=26% Similarity=0.622 Sum_probs=33.6
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+...... +|++|++++.........++++||+..|++.
T Consensus 67 ~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 109 (304)
T cd05101 67 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 109 (304)
T ss_pred HHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHH
Confidence 34555555555 8999999998888888899999999988764
No 299
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=30.32 E-value=82 Score=25.85 Aligned_cols=45 Identities=22% Similarity=0.479 Sum_probs=36.6
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
......+......+|++|++++.........++++||+..+++..
T Consensus 44 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 88 (264)
T cd06626 44 KEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEE 88 (264)
T ss_pred HHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHH
Confidence 444566677778899999999988777788999999999887764
No 300
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=30.26 E-value=28 Score=30.22 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=29.6
Q ss_pred HHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+|++|++++.....+...++++||+..|++.
T Consensus 50 l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (325)
T cd05604 50 LKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELF 84 (325)
T ss_pred HHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHH
Confidence 34568999999998888888899999999998874
No 301
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=30.19 E-value=49 Score=27.58 Aligned_cols=42 Identities=26% Similarity=0.532 Sum_probs=32.7
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+....+. +|++|++++..+......++++||+.+|++.
T Consensus 42 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (270)
T cd05047 42 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 84 (270)
T ss_pred HHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHH
Confidence 33455555555 7999999998888778889999999988764
No 302
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=30.12 E-value=79 Score=27.17 Aligned_cols=35 Identities=17% Similarity=0.605 Sum_probs=30.8
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
..+-...+..|.+|++++........+.++.||+.
T Consensus 50 REIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~ 84 (318)
T KOG0659|consen 50 REIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP 84 (318)
T ss_pred HHHHHHHHccCcchhhhhhhccCCCceEEEEEecc
Confidence 45556777889999999999999999999999986
No 303
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=30.01 E-value=60 Score=27.37 Aligned_cols=44 Identities=23% Similarity=0.542 Sum_probs=36.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|+.++++...+......++++||+..+++.
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (288)
T cd05093 52 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 95 (288)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 34456677777889999999998888888899999999988874
No 304
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=29.83 E-value=66 Score=26.49 Aligned_cols=42 Identities=38% Similarity=0.615 Sum_probs=33.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++..........++++||+..+++.
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 46 FIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 344566677788999999987777777889999999888764
No 305
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=29.81 E-value=41 Score=28.01 Aligned_cols=39 Identities=13% Similarity=0.331 Sum_probs=31.9
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
..+.......|++|++++..+..+...++++||+..|.+
T Consensus 53 ~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l 91 (262)
T cd05077 53 ETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL 91 (262)
T ss_pred HHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCH
Confidence 344556677899999999888888888999999988875
No 306
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=29.67 E-value=49 Score=27.57 Aligned_cols=44 Identities=30% Similarity=0.529 Sum_probs=35.9
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+....+..|+++++++..+......++++||+..|+|.
T Consensus 53 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (275)
T cd05046 53 SEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLK 96 (275)
T ss_pred HHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHH
Confidence 34556677777889999999998887777889999999888875
No 307
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=29.45 E-value=60 Score=26.64 Aligned_cols=44 Identities=30% Similarity=0.398 Sum_probs=36.1
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++++++......+...++++||+..+++.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (264)
T cd06623 44 KQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLA 87 (264)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHH
Confidence 44556677777778999999998888888899999999988765
No 308
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=29.43 E-value=63 Score=26.72 Aligned_cols=41 Identities=24% Similarity=0.466 Sum_probs=33.8
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.......|+.+++++.........++++||+..+++.
T Consensus 54 ~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~ 94 (267)
T cd06646 54 QQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQ 94 (267)
T ss_pred HHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHH
Confidence 34556677779999999998888888899999999988774
No 309
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=29.29 E-value=50 Score=27.07 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++..+.. ...++++||+..|++.
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~ 88 (259)
T cd05037 47 AFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLD 88 (259)
T ss_pred HHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHH
Confidence 34455566677789999999987766 6778999999999875
No 310
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=28.91 E-value=1.2e+02 Score=24.99 Aligned_cols=69 Identities=26% Similarity=0.307 Sum_probs=45.1
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|... +..-++|.+.... ...........+.......|++++++..........++++||+..+++.
T Consensus 17 v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (265)
T cd06605 17 VSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLD 87 (265)
T ss_pred EEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHH
Confidence 4444443 3444555443221 1222333445667777778999999998888888899999999877665
No 311
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=28.78 E-value=1.3e+02 Score=23.95 Aligned_cols=43 Identities=23% Similarity=0.464 Sum_probs=34.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|..+++++.....+....+++|+...+++.
T Consensus 33 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 33 RILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred HHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence 4445555566669999999999988888899999999887664
No 312
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=28.47 E-value=1.3e+02 Score=24.73 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=32.6
Q ss_pred HHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 235 ~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.........|++++++..........++++||+..+++.
T Consensus 52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 90 (260)
T cd08222 52 EAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLD 90 (260)
T ss_pred HHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHH
Confidence 345566778999999999888888899999999988764
No 313
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=28.37 E-value=30 Score=32.01 Aligned_cols=70 Identities=24% Similarity=0.345 Sum_probs=44.1
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC----CeEEEEecCCCCCCCc
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI----PMMIVLEYHAKVSMPI 274 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~----~l~~~~e~~~~g~l~~ 274 (294)
...+.|-..+....||.+-......-... ..+...--..|.+|++|+..-...+ ..+++++|.++|+|.+
T Consensus 224 g~V~KaqL~~~~VAVKifp~~~kqs~~~E----k~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~d 297 (534)
T KOG3653|consen 224 GCVWKAQLDNRLVAVKIFPEQEKQSFQNE----KNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCD 297 (534)
T ss_pred ceeehhhccCceeEEEecCHHHHHHHHhH----HHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHH
Confidence 34566666677777887743322111111 1111122568999999997754444 7899999999999863
No 314
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=28.17 E-value=63 Score=26.74 Aligned_cols=43 Identities=26% Similarity=0.474 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++..+..+...++++||+..+++.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (269)
T cd05044 45 EFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLL 87 (269)
T ss_pred HHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHH
Confidence 3345566667779999999998888788899999999988775
No 315
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=27.97 E-value=64 Score=26.67 Aligned_cols=42 Identities=21% Similarity=0.487 Sum_probs=35.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|+++++++..+......++++||+..+++.
T Consensus 49 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (265)
T cd06631 49 LQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSIS 90 (265)
T ss_pred HHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHH
Confidence 445667777788999999999888888899999999988765
No 316
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=27.58 E-value=59 Score=26.91 Aligned_cols=42 Identities=31% Similarity=0.528 Sum_probs=34.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++..........++++||+..+++.
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (268)
T cd05063 53 FLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALD 94 (268)
T ss_pred HHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHH
Confidence 444555666778999999998888888899999999988874
No 317
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=27.34 E-value=87 Score=25.81 Aligned_cols=43 Identities=21% Similarity=0.507 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++.........++++||+..+++.
T Consensus 49 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~ 91 (268)
T cd06630 49 ALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS 91 (268)
T ss_pred HHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHH
Confidence 3445666777779999999999988888899999999888764
No 318
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=27.16 E-value=12 Score=31.41 Aligned_cols=40 Identities=25% Similarity=0.532 Sum_probs=34.1
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.+-....|++|+++......+..+++++||.++|+++
T Consensus 71 REiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~ 110 (281)
T KOG0580|consen 71 REIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELY 110 (281)
T ss_pred heeEeecccCCccHHhhhhheeccceeEEEEEecCCchHH
Confidence 3444555668999999999999999999999999999987
No 319
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=26.94 E-value=80 Score=26.29 Aligned_cols=44 Identities=27% Similarity=0.538 Sum_probs=35.5
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++++++..........++++||+..|++.
T Consensus 53 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (280)
T cd05049 53 KDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLN 96 (280)
T ss_pred HHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHH
Confidence 34445566677778999999998888888899999999988764
No 320
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=26.59 E-value=58 Score=26.72 Aligned_cols=43 Identities=26% Similarity=0.422 Sum_probs=34.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.............|++++++......+..+++++||+..|++.
T Consensus 44 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 86 (255)
T cd08219 44 DSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLM 86 (255)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHH
Confidence 3445566677789999999998888888899999999988753
No 321
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=26.42 E-value=1e+02 Score=25.76 Aligned_cols=44 Identities=23% Similarity=0.446 Sum_probs=35.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++++++..........++++||..+|++.
T Consensus 47 ~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~ 90 (282)
T cd06643 47 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 90 (282)
T ss_pred HHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHH
Confidence 34445666777789999999998888788899999999988763
No 322
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=26.39 E-value=68 Score=26.29 Aligned_cols=42 Identities=29% Similarity=0.570 Sum_probs=33.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|+++++++.........++++||+..+++.
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 46 FIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred HHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 445666677779999999998887778899999999988753
No 323
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=26.38 E-value=74 Score=27.62 Aligned_cols=42 Identities=26% Similarity=0.611 Sum_probs=33.3
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+....+. +|++|+++...+.....+++++||+..|++.
T Consensus 64 ~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 106 (334)
T cd05100 64 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLR 106 (334)
T ss_pred HHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHH
Confidence 33445555555 7999999998888888899999999998764
No 324
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=26.34 E-value=95 Score=26.40 Aligned_cols=41 Identities=17% Similarity=0.309 Sum_probs=33.9
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|+++++++.........++++||+..+++.
T Consensus 66 ~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 66 FNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred HHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 34556666778999999999988888999999999887764
No 325
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=26.21 E-value=40 Score=28.49 Aligned_cols=41 Identities=22% Similarity=0.189 Sum_probs=33.1
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|.+++.+......+....+++||+..+++.
T Consensus 48 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLK 88 (285)
T ss_pred HHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHH
Confidence 34556666778999999988888888899999999988764
No 326
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=26.20 E-value=26 Score=33.53 Aligned_cols=71 Identities=18% Similarity=0.309 Sum_probs=54.8
Q ss_pred CCceeeeeecCchhh--hHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCC
Q 022605 200 KGSYQVAKWNGTKVW--VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKV 270 (294)
Q Consensus 200 ~t~l~~A~~~g~~~~--v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g 270 (294)
..+.++|--..+.++ ++.+--.|.....+..+-...+-+.-...|+++|+|-++.-.+...|++||||-+.
T Consensus 39 FGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClGS 111 (948)
T KOG0577|consen 39 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGS 111 (948)
T ss_pred cceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhcc
Confidence 367777765555544 45555456666677777778888888999999999999999999999999999653
No 327
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=26.03 E-value=88 Score=25.52 Aligned_cols=43 Identities=28% Similarity=0.529 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++++++..........++++||...+++.
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (258)
T cd06632 48 QLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLA 90 (258)
T ss_pred HHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHH
Confidence 3445666667779999999998888888899999999887764
No 328
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=26.02 E-value=65 Score=29.96 Aligned_cols=52 Identities=10% Similarity=-0.113 Sum_probs=36.7
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHH
Q 022605 94 EGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADA 145 (294)
Q Consensus 94 ~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~~~~g~t~L~~A 145 (294)
....+|.....++++|+++...+|.+.+.....+ -++-+..+..++++..+.
T Consensus 166 ~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~~~ 218 (558)
T KOG4335|consen 166 PKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQIID 218 (558)
T ss_pred cccCCchhhccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcchhhhH
Confidence 3456677777888899998888888888776655 344455666777776554
No 329
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=25.90 E-value=63 Score=26.53 Aligned_cols=44 Identities=27% Similarity=0.582 Sum_probs=35.9
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++++++.........+++++||...+++.
T Consensus 45 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~ 88 (262)
T cd06613 45 EIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ 88 (262)
T ss_pred HHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 34456677788889999999998877777899999999888765
No 330
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=25.76 E-value=4.7 Score=37.60 Aligned_cols=49 Identities=27% Similarity=0.175 Sum_probs=30.9
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 022605 103 LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNV 151 (294)
Q Consensus 103 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~ 151 (294)
....++++..+.....+++..++..+......+..|.|+||.+...++.
T Consensus 134 ~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 134 GDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred cccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc
Confidence 4455666666666666666666665555555555677777777666555
No 331
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=25.58 E-value=75 Score=26.42 Aligned_cols=42 Identities=19% Similarity=0.444 Sum_probs=33.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++++++......+...++++||+..+++.
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (274)
T cd06609 46 IQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCL 87 (274)
T ss_pred HHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHH
Confidence 344556666778999999998887788899999999988764
No 332
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=25.36 E-value=78 Score=26.27 Aligned_cols=41 Identities=29% Similarity=0.398 Sum_probs=33.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........+|+.+++++.........++++||+..+++.
T Consensus 56 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (272)
T cd06629 56 RSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIG 96 (272)
T ss_pred HHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHH
Confidence 34555666778999999998888888899999999988764
No 333
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=24.91 E-value=17 Score=34.40 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=45.8
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV 164 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 164 (294)
|+..+....+-.|++.|+.++..|..+.+|+|+++..|..++.+.++....+.
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~ 455 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAI 455 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhh
Confidence 56677777888889999999999999999999999999999999988765444
No 334
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=24.77 E-value=86 Score=25.55 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=29.5
Q ss_pred HHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....|++++++..........++++||+.+|++.
T Consensus 39 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 39 IIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred HHhcCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 34557899999998888888899999999999874
No 335
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=24.68 E-value=75 Score=27.24 Aligned_cols=41 Identities=27% Similarity=0.594 Sum_probs=32.5
Q ss_pred hhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+...... +|++|++++..+......++++||+..|++.
T Consensus 65 ~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 106 (314)
T cd05099 65 ISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLR 106 (314)
T ss_pred HHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHH
Confidence 3455555555 6999999998887777899999999988764
No 336
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=24.58 E-value=74 Score=26.17 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=28.8
Q ss_pred HHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 240 ~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+|++++++......+...++++||+..+++.
T Consensus 52 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 85 (260)
T cd05611 52 IQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCA 85 (260)
T ss_pred hcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHH
Confidence 3448899999998888888899999999988765
No 337
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=24.53 E-value=98 Score=25.21 Aligned_cols=44 Identities=32% Similarity=0.563 Sum_probs=35.0
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|+++..........++++||+..+++.
T Consensus 37 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 37 RKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 34456666777789999999998888888899999999877663
No 338
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=24.37 E-value=1.4e+02 Score=24.84 Aligned_cols=38 Identities=18% Similarity=0.516 Sum_probs=32.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
.....+.......|+++++++.........++++||+.
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 82 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence 34566777888899999999999888889999999985
No 339
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=24.34 E-value=47 Score=28.70 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=29.4
Q ss_pred HHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....|++|+++..........++++||+..|++.
T Consensus 50 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (321)
T cd05603 50 LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELF 84 (321)
T ss_pred HHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHH
Confidence 45568999999988777778899999999988763
No 340
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=23.73 E-value=64 Score=27.56 Aligned_cols=39 Identities=28% Similarity=0.654 Sum_probs=31.1
Q ss_pred HHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 235 ELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 235 ~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+...... +|++++++...+......++++||+..|++.
T Consensus 73 e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (307)
T cd05098 73 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 112 (307)
T ss_pred HHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHH
Confidence 44444444 7999999999888888999999999988763
No 341
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=23.60 E-value=44 Score=28.92 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=28.8
Q ss_pred HHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 240 ~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....|++|++++.........++++||+..|++.
T Consensus 57 ~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~ 90 (324)
T cd05589 57 NSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLM 90 (324)
T ss_pred cccCCCChhceeeEEEcCCEEEEEEcCCCCCcHH
Confidence 4457999999998887788899999999988763
No 342
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=23.52 E-value=93 Score=26.05 Aligned_cols=43 Identities=26% Similarity=0.565 Sum_probs=34.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (280)
T cd05092 53 DFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLN 95 (280)
T ss_pred HHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHH
Confidence 4445666677779999999998877777889999999988764
No 343
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=23.06 E-value=65 Score=27.95 Aligned_cols=36 Identities=25% Similarity=0.291 Sum_probs=25.8
Q ss_pred HHHHHHHHhc-CCCCCCCCCCCCcHH-HHHHHcCcHHH
Q 022605 85 VKGVEDLLNE-GSDVNSIDLDGRTAL-HIAACEGHVEV 120 (294)
Q Consensus 85 ~~~v~~Ll~~-g~~~~~~~~~g~TpL-h~A~~~g~~~~ 120 (294)
.++...+|++ |..+..+..-|.|++ |-|...|++++
T Consensus 49 ~~m~~~lle~~~~kv~~~~~lG~t~v~~~Al~~G~IDi 86 (300)
T COG1732 49 GNILKQLLEKNGIKVEDKTGLGGTAVVRNALKSGDIDI 86 (300)
T ss_pred HHHHHHHHHhcCCceeeccCCCchHHHHHHHHcCCCCe
Confidence 3567777765 456667777788855 88888888765
No 344
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=23.02 E-value=90 Score=26.57 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=35.1
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....-+.....|++|++++.......-.+++.|++..|++.
T Consensus 58 ~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~ 98 (355)
T KOG0033|consen 58 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 98 (355)
T ss_pred HHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHH
Confidence 35566777889999999999999998899999999988764
No 345
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=22.96 E-value=1.5e+02 Score=24.37 Aligned_cols=42 Identities=31% Similarity=0.498 Sum_probs=32.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++++++...... ...++++||+..|++.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 88 (260)
T cd05073 47 AFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 88 (260)
T ss_pred HHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence 33445666777889999999877665 6778999999988764
No 346
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=22.79 E-value=87 Score=25.66 Aligned_cols=41 Identities=27% Similarity=0.482 Sum_probs=31.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|+++++++..... ...++++||+..+++.
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 86 (254)
T cd05083 46 FLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLV 86 (254)
T ss_pred HHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCHH
Confidence 3455666677789999999877654 4578999999888764
No 347
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=22.62 E-value=1.3e+02 Score=24.78 Aligned_cols=42 Identities=19% Similarity=0.411 Sum_probs=32.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++..+. ....++++||+..|++.
T Consensus 41 ~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~ 82 (257)
T cd05115 41 EMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLN 82 (257)
T ss_pred HHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHH
Confidence 3445566777789999999987664 45788999999988775
No 348
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=22.55 E-value=43 Score=28.99 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=28.2
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..|+.|++++........+++++||+..|++.
T Consensus 53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~ 84 (316)
T cd05619 53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLM 84 (316)
T ss_pred cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 58999999998888888899999999998874
No 349
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=22.52 E-value=1.1e+02 Score=25.35 Aligned_cols=40 Identities=20% Similarity=0.473 Sum_probs=30.3
Q ss_pred hHHHHHHHc---CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA---RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~---~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...... .|++++++...+......++++||+..+++.
T Consensus 48 ~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (277)
T cd06917 48 REVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVR 90 (277)
T ss_pred HHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHH
Confidence 344444444 4899999998887778889999999888764
No 350
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=22.29 E-value=1.5e+02 Score=24.14 Aligned_cols=43 Identities=37% Similarity=0.668 Sum_probs=34.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|+++++++.........++++||+..+++.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~ 89 (258)
T smart00219 47 EFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLL 89 (258)
T ss_pred HHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHH
Confidence 3445566666779999999998888778899999999888764
No 351
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=22.28 E-value=86 Score=26.59 Aligned_cols=42 Identities=29% Similarity=0.517 Sum_probs=32.6
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+....+. .|++++++..........++++||++.|++.
T Consensus 49 ~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (297)
T cd05089 49 FAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLL 91 (297)
T ss_pred HHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHH
Confidence 34455555555 7999999998877777899999999888764
No 352
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=22.15 E-value=1.1e+02 Score=25.33 Aligned_cols=40 Identities=20% Similarity=0.478 Sum_probs=33.2
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.......|+++++++.........++++||+..+++.
T Consensus 55 ~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (267)
T cd06645 55 QEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ 94 (267)
T ss_pred HHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence 4455666778999999998888788899999999988875
No 353
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=22.11 E-value=1.1e+02 Score=25.35 Aligned_cols=45 Identities=22% Similarity=0.479 Sum_probs=33.2
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcC--CCCeEEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~--~~~l~~~~e~~~~g~l~ 273 (294)
.......+.......|++++++...... ....++++||+..+++.
T Consensus 50 ~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~ 96 (284)
T cd05038 50 RSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLR 96 (284)
T ss_pred HHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHH
Confidence 3445566667778899999998865544 44678999999888764
No 354
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=21.90 E-value=1.1e+02 Score=25.82 Aligned_cols=41 Identities=24% Similarity=0.513 Sum_probs=33.6
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+......+|++++++...+......++++||+.++++.
T Consensus 64 ~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (293)
T cd06647 64 INEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (293)
T ss_pred HHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHH
Confidence 34555667778999999998887788899999999988775
No 355
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=21.65 E-value=42 Score=29.01 Aligned_cols=32 Identities=9% Similarity=0.176 Sum_probs=27.7
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+|+.|++++.....+..+++++||+..|++.
T Consensus 53 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~ 84 (316)
T cd05620 53 WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLM 84 (316)
T ss_pred cCCCCccCeeEEEEeCCEEEEEECCCCCCcHH
Confidence 47899999998887788899999999988874
No 356
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=21.61 E-value=54 Score=28.33 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=28.2
Q ss_pred HcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 241 ~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...|+.|++++.........++++||+..|+|.
T Consensus 52 ~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~ 84 (316)
T cd05592 52 AWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLM 84 (316)
T ss_pred ccCCCCccceeeEEEcCCEEEEEEcCCCCCcHH
Confidence 358999999998877778899999999988874
No 357
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=21.42 E-value=1.1e+02 Score=24.80 Aligned_cols=45 Identities=29% Similarity=0.560 Sum_probs=35.2
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCC--CCeEEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~--~~l~~~~e~~~~g~l~ 273 (294)
.......+.......|+++++++...... ...++++|+...+++.
T Consensus 43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (260)
T cd06606 43 LEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLS 89 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHH
Confidence 34455677778888899999999877766 6789999999877654
No 358
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=21.23 E-value=1.1e+02 Score=25.06 Aligned_cols=43 Identities=23% Similarity=0.465 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++.........++++||+..+++.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd08218 45 ESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLY 87 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHH
Confidence 3345566777789999999998888888899999999888764
No 359
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=21.22 E-value=67 Score=28.00 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=33.0
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+.-.+.....|+.++++-........++++|||.+.|.+.
T Consensus 93 nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElF 132 (355)
T KOG0616|consen 93 NEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELF 132 (355)
T ss_pred hHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHH
Confidence 3444555566999999998999999999999999999875
No 360
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=21.10 E-value=65 Score=28.21 Aligned_cols=57 Identities=21% Similarity=0.307 Sum_probs=38.4
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC----CCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN----IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~----~~l~~~~e~~~~g~l~ 273 (294)
|..-..|.|+ +.+...+ .-.|||.+ .+|++||..+...... ..+.++||.+.+|.|.
T Consensus 87 ~ekfALKvL~----Ds~KARr--EVeLHw~~-s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLf 147 (400)
T KOG0604|consen 87 QEKFALKVLL----DSPKARR--EVELHWMA-SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELF 147 (400)
T ss_pred hhhhHHHHHh----cCHHHHh--Hhhhhhhh-cCCCceEEeehhhhhhccCceeeEeeeecccchHHH
Confidence 3445677777 3333332 35677664 6889999988664332 4689999999999874
No 361
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=21.03 E-value=1.1e+02 Score=25.73 Aligned_cols=43 Identities=23% Similarity=0.576 Sum_probs=35.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|+++++++..+..+...++++|++..+++.
T Consensus 65 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (296)
T cd05051 65 DFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLN 107 (296)
T ss_pred HHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHH
Confidence 4445667777889999999998888888899999999888764
No 362
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=20.82 E-value=97 Score=25.26 Aligned_cols=44 Identities=25% Similarity=0.514 Sum_probs=35.9
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+......+|+++++++.........++++||+..+++.
T Consensus 43 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 86 (256)
T cd06612 43 QEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVS 86 (256)
T ss_pred HHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHH
Confidence 34455666677779999999998888888899999999988765
No 363
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=20.79 E-value=71 Score=27.14 Aligned_cols=42 Identities=21% Similarity=0.471 Sum_probs=34.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|+++++++.........++++||+.++++.
T Consensus 64 ~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (296)
T cd06654 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (296)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence 344556667779999999998877778899999999988875
No 364
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=20.60 E-value=1.3e+02 Score=25.78 Aligned_cols=37 Identities=22% Similarity=0.554 Sum_probs=30.4
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
....+......+|+++++++..+..+...++++||+.
T Consensus 72 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 108 (317)
T cd06635 72 IIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL 108 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC
Confidence 3445666677789999999998888888999999986
No 365
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=20.33 E-value=1.3e+02 Score=24.64 Aligned_cols=45 Identities=16% Similarity=0.325 Sum_probs=33.2
Q ss_pred hhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 228 RINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
........+......+|+++++++..+. ....++++||+..|++.
T Consensus 39 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 83 (257)
T cd05116 39 LKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLN 83 (257)
T ss_pred HHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHH
Confidence 3344455566777789999999987654 45678899999988774
No 366
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=20.24 E-value=63 Score=27.91 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=29.0
Q ss_pred HHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 240 EKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 240 ~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+|++|+++..........++++||+..|++.
T Consensus 51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 84 (323)
T cd05575 51 KNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELF 84 (323)
T ss_pred hhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHH
Confidence 4568999999988877778899999999998874
No 367
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=20.20 E-value=1.2e+02 Score=25.46 Aligned_cols=44 Identities=25% Similarity=0.431 Sum_probs=33.0
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCC--CCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~--~~l~~~~e~~~~g~l~ 273 (294)
......+......+|++|++++..+... ..+++++||+..+++.
T Consensus 44 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (287)
T cd06621 44 KQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLD 89 (287)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHH
Confidence 3345567777788999999998765432 3578999999988874
No 368
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=20.16 E-value=82 Score=26.77 Aligned_cols=42 Identities=21% Similarity=0.471 Sum_probs=34.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+......+|+++++++..+..+...++++||+.++++.
T Consensus 63 ~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (297)
T cd06656 63 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (297)
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence 344556677789999999998887788899999999988775
No 369
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=20.10 E-value=66 Score=27.83 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=29.3
Q ss_pred HHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 239 VEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 239 a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+|++|+++..........++++||+..|++.
T Consensus 50 l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (325)
T cd05602 50 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELF 84 (325)
T ss_pred HHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHH
Confidence 34568999999988877788899999999988774
Done!