Query 022605
Match_columns 294
No_of_seqs 293 out of 2937
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 08:11:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d9h_A CDNA FLJ77766, highly s 100.0 8.3E-40 2.8E-44 281.2 13.1 241 34-284 10-266 (285)
2 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-39 3.8E-44 276.7 11.0 206 71-286 2-212 (261)
3 3b7b_A Euchromatic histone-lys 100.0 9.5E-39 3.2E-43 266.5 11.3 213 66-287 5-224 (237)
4 3utm_A Tankyrase-1; tankyrase, 100.0 4.4E-39 1.5E-43 282.9 8.8 236 39-283 24-323 (351)
5 1yyh_A HN1;, notch 1, ankyrin 100.0 3.4E-39 1.2E-43 272.4 7.4 203 51-254 35-245 (253)
6 1wdy_A 2-5A-dependent ribonucl 100.0 2E-39 6.7E-44 276.9 5.0 241 40-288 6-268 (285)
7 1s70_B 130 kDa myosin-binding 100.0 4.7E-38 1.6E-42 271.2 12.7 209 67-283 35-275 (299)
8 1oy3_D Transcription factor in 100.0 7.2E-39 2.5E-43 273.6 7.4 211 66-285 3-270 (282)
9 1k1a_A B-cell lymphoma 3-encod 100.0 3.6E-38 1.2E-42 263.3 10.8 217 66-291 3-234 (241)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 2.6E-38 9E-43 267.0 8.8 189 70-259 8-217 (253)
11 4b93_B Ankyrin repeat domain-c 100.0 2.5E-38 8.6E-43 269.7 7.9 211 67-286 6-231 (269)
12 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-39 5.6E-44 275.7 -0.6 241 39-284 3-249 (261)
13 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-38 2.4E-42 284.2 8.2 243 37-288 144-392 (437)
14 2fo1_E LIN-12 protein; beta-ba 100.0 2.4E-38 8.2E-43 282.1 4.5 242 36-289 91-362 (373)
15 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-38 2.4E-42 284.3 7.7 243 38-289 112-360 (437)
16 2f8y_A Notch homolog 1, transl 100.0 4.3E-37 1.5E-41 254.1 10.4 208 50-258 2-217 (223)
17 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-37 5.9E-42 276.6 7.5 220 38-257 124-371 (373)
18 4gpm_A Engineered protein OR26 100.0 4E-36 1.4E-40 238.4 14.0 157 74-258 6-162 (169)
19 3aji_A 26S proteasome non-ATPa 100.0 1.9E-36 6.6E-41 251.5 9.5 206 72-286 6-218 (231)
20 2dzn_A Probable 26S proteasome 100.0 1.7E-36 5.7E-41 251.3 9.1 205 72-285 2-220 (228)
21 3ljn_A Hypothetical protein; a 100.0 1.9E-37 6.6E-42 275.0 3.4 212 66-288 14-259 (364)
22 1k1a_A B-cell lymphoma 3-encod 100.0 1E-37 3.5E-42 260.6 0.0 222 34-256 4-240 (241)
23 1wdy_A 2-5A-dependent ribonucl 100.0 4.5E-36 1.6E-40 256.0 8.5 223 36-259 36-280 (285)
24 3ljn_A Hypothetical protein; a 100.0 8.6E-38 2.9E-42 277.3 -2.6 250 35-286 16-302 (364)
25 3eu9_A Huntingtin-interacting 100.0 1.6E-35 5.3E-40 246.7 10.0 224 34-258 4-236 (240)
26 2rfa_A Transient receptor pote 100.0 8.9E-36 3E-40 247.8 8.2 187 71-258 2-223 (232)
27 4b93_B Ankyrin repeat domain-c 100.0 1.3E-37 4.3E-42 265.4 -3.7 209 40-251 12-235 (269)
28 3b7b_A Euchromatic histone-lys 100.0 5.7E-36 1.9E-40 249.6 6.1 218 34-252 6-230 (237)
29 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-36 7.7E-41 265.4 3.2 237 39-289 25-317 (337)
30 1oy3_D Transcription factor in 100.0 2.6E-36 9E-41 257.7 3.2 209 34-243 4-269 (282)
31 3kea_A K1L; tropism, ANK repea 100.0 9.8E-37 3.3E-41 262.0 -0.2 203 50-258 10-221 (285)
32 3d9h_A CDNA FLJ77766, highly s 100.0 3.3E-36 1.1E-40 258.7 3.1 215 35-254 55-275 (285)
33 1ikn_D Protein (I-kappa-B-alph 100.0 4.3E-35 1.5E-39 244.5 9.4 219 35-287 4-233 (236)
34 3hra_A Ankyrin repeat family p 100.0 7.4E-35 2.5E-39 236.9 10.0 186 70-255 3-201 (201)
35 3eu9_A Huntingtin-interacting 100.0 4.4E-35 1.5E-39 243.9 8.3 214 67-289 4-226 (240)
36 2dzn_A Probable 26S proteasome 100.0 1.1E-35 3.7E-40 246.4 3.3 211 40-253 3-226 (228)
37 3utm_A Tankyrase-1; tankyrase, 100.0 2.9E-35 9.8E-40 258.6 6.1 236 34-285 53-351 (351)
38 1ikn_D Protein (I-kappa-B-alph 100.0 4.1E-35 1.4E-39 244.6 5.3 192 67-288 3-199 (236)
39 4gpm_A Engineered protein OR26 100.0 4.8E-34 1.7E-38 226.4 10.3 156 42-225 7-162 (169)
40 2etb_A Transient receptor pote 100.0 4.1E-35 1.4E-39 247.6 1.2 186 72-257 2-246 (256)
41 2rfm_A Putative ankyrin repeat 100.0 3.7E-33 1.3E-37 225.6 10.9 162 66-255 29-190 (192)
42 3aji_A 26S proteasome non-ATPa 100.0 1.1E-33 3.6E-38 235.0 7.4 219 38-257 5-230 (231)
43 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-32 6.4E-37 217.1 13.7 159 68-254 10-168 (169)
44 2f8y_A Notch homolog 1, transl 100.0 2.8E-34 9.7E-39 237.2 3.0 198 82-288 1-206 (223)
45 4g8k_A 2-5A-dependent ribonucl 100.0 9.5E-34 3.2E-38 248.7 5.8 217 39-260 59-329 (337)
46 2vge_A RELA-associated inhibit 100.0 4.9E-33 1.7E-37 231.5 9.9 188 66-289 15-204 (229)
47 3kea_A K1L; tropism, ANK repea 100.0 6.5E-35 2.2E-39 250.7 -1.7 215 33-257 25-246 (285)
48 3v31_A Ankyrin repeat family A 100.0 1.4E-32 4.7E-37 217.2 11.8 158 71-256 2-159 (167)
49 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-32 4.3E-37 216.2 11.1 158 71-257 4-162 (162)
50 1s70_B 130 kDa myosin-binding 100.0 3.9E-35 1.3E-39 252.9 -3.7 207 35-242 36-275 (299)
51 3v30_A DNA-binding protein rfx 100.0 1.7E-32 5.7E-37 217.8 10.0 158 72-257 2-160 (172)
52 2rfa_A Transient receptor pote 100.0 2.9E-33 9.8E-38 232.6 5.7 187 39-225 3-223 (232)
53 1sw6_A Regulatory protein SWI6 100.0 7.1E-34 2.4E-38 248.8 1.9 184 54-243 112-327 (327)
54 1awc_B Protein (GA binding pro 100.0 6.7E-32 2.3E-36 210.3 12.2 152 71-251 1-152 (153)
55 3hra_A Ankyrin repeat family p 100.0 4.8E-33 1.6E-37 226.1 5.3 185 37-222 3-201 (201)
56 2pnn_A Transient receptor pote 100.0 5.2E-33 1.8E-37 236.9 5.3 193 37-257 11-258 (273)
57 1sw6_A Regulatory protein SWI6 100.0 2.7E-33 9.1E-38 245.2 2.5 192 77-284 102-327 (327)
58 2pnn_A Transient receptor pote 100.0 7.5E-33 2.6E-37 235.9 5.2 210 65-289 6-249 (273)
59 2vge_A RELA-associated inhibit 100.0 1.2E-32 4.1E-37 229.1 4.3 182 38-219 20-208 (229)
60 3jxi_A Vanilloid receptor-rela 100.0 1.1E-32 3.7E-37 233.1 4.1 189 41-257 7-250 (260)
61 2etb_A Transient receptor pote 100.0 1.5E-32 5.2E-37 231.8 2.4 184 41-225 4-247 (256)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.8E-31 3E-35 204.4 12.2 152 72-253 2-154 (156)
63 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-31 7.2E-36 210.0 8.3 159 68-255 4-163 (165)
64 4hbd_A KN motif and ankyrin re 100.0 8.1E-31 2.8E-35 224.1 11.4 163 65-255 104-273 (276)
65 3f6q_A Integrin-linked protein 100.0 4.2E-31 1.4E-35 211.2 8.6 161 70-258 3-164 (179)
66 3jxi_A Vanilloid receptor-rela 100.0 1.3E-31 4.5E-36 226.5 4.2 206 69-289 2-241 (260)
67 3v30_A DNA-binding protein rfx 100.0 4.6E-31 1.6E-35 209.4 6.9 168 40-235 3-171 (172)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 5.4E-31 1.8E-35 220.4 5.3 186 70-286 3-194 (239)
69 3twr_A Tankyrase-2; ankyrin re 100.0 7.7E-30 2.6E-34 201.0 10.4 158 37-223 6-164 (165)
70 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.4E-30 1.5E-34 203.4 8.4 157 38-222 13-169 (169)
71 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.5E-30 1.2E-34 202.2 7.1 157 39-223 5-161 (162)
72 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.9E-30 6.4E-35 217.2 5.7 213 39-284 5-229 (239)
73 3f6q_A Integrin-linked protein 100.0 8.3E-30 2.8E-34 203.6 9.1 164 37-228 3-167 (179)
74 2rfm_A Putative ankyrin repeat 100.0 7.3E-30 2.5E-34 206.2 8.8 161 34-222 30-190 (192)
75 3v31_A Ankyrin repeat family A 100.0 9.4E-30 3.2E-34 200.9 8.6 156 39-222 3-158 (167)
76 1d9s_A Cyclin-dependent kinase 100.0 1.4E-29 4.9E-34 193.3 8.7 131 64-223 4-135 (136)
77 4hbd_A KN motif and ankyrin re 100.0 1.1E-30 3.9E-35 223.2 1.6 182 72-289 76-266 (276)
78 1bi7_B P16INK4A, MTS1, multipl 100.0 1.8E-29 6E-34 197.3 8.3 144 66-238 6-150 (156)
79 1awc_B Protein (GA binding pro 100.0 1.3E-29 4.4E-34 197.3 6.9 148 42-218 5-152 (153)
80 2jab_A H10-2-G3; HER2, darpin, 100.0 1.7E-28 5.7E-33 187.3 11.8 129 66-222 8-136 (136)
81 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.1E-29 1.7E-33 194.4 6.2 151 41-221 4-155 (156)
82 3t8k_A Uncharacterized protein 99.9 1.2E-28 4E-33 198.4 7.3 155 72-256 6-178 (186)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-27 4.9E-32 178.8 12.2 125 71-223 1-125 (126)
84 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-27 4.7E-32 182.4 12.2 127 67-221 5-131 (137)
85 3deo_A Signal recognition part 99.9 1.2E-28 4E-33 197.8 5.0 135 69-219 41-179 (183)
86 3aaa_C Myotrophin, protein V-1 99.9 4.5E-27 1.6E-31 176.1 11.0 111 69-179 4-117 (123)
87 1d9s_A Cyclin-dependent kinase 99.9 9E-28 3.1E-32 183.2 7.0 134 95-257 2-136 (136)
88 3ui2_A Signal recognition part 99.9 1.4E-27 4.7E-32 200.4 7.8 137 69-221 42-182 (244)
89 3t8k_A Uncharacterized protein 99.9 1.8E-28 6E-33 197.4 0.1 151 41-221 8-176 (186)
90 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.9E-26 2E-30 161.6 12.4 93 71-163 1-93 (93)
91 3ehr_A Osteoclast-stimulating 99.9 1.1E-26 3.7E-31 191.9 9.4 134 68-229 69-203 (222)
92 2aja_A Ankyrin repeat family p 99.9 1.3E-28 4.5E-33 218.7 -2.7 176 68-289 88-270 (376)
93 2aja_A Ankyrin repeat family p 99.9 6.8E-30 2.3E-34 226.9 -12.5 229 39-288 92-364 (376)
94 2b0o_E UPLC1; arfgap, structur 99.9 1.8E-26 6.1E-31 199.5 8.5 141 71-245 150-299 (301)
95 1bi7_B P16INK4A, MTS1, multipl 99.9 1.4E-26 4.7E-31 180.8 3.9 138 35-173 8-149 (156)
96 3c5r_A BARD-1, BRCA1-associate 99.9 2E-26 7E-31 175.8 3.1 134 95-257 1-134 (137)
97 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 171.3 6.8 126 36-161 11-136 (136)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.6E-25 2.3E-29 164.2 8.5 125 39-163 2-126 (126)
99 2b0o_E UPLC1; arfgap, structur 99.9 3.3E-25 1.1E-29 191.5 7.5 136 41-179 153-297 (301)
100 3jue_A Arfgap with coiled-coil 99.9 1.8E-24 6.2E-29 191.4 11.4 147 68-242 195-347 (368)
101 2l6b_A NR1C; ankyrin, consensu 99.9 1.4E-24 4.7E-29 160.5 7.4 105 67-171 4-111 (115)
102 3lvq_E ARF-GAP with SH3 domain 99.9 7.1E-24 2.4E-28 195.5 12.2 128 72-227 132-268 (497)
103 1dcq_A PYK2-associated protein 99.9 2.4E-23 8.3E-28 177.8 12.1 126 71-224 129-263 (278)
104 1dcq_A PYK2-associated protein 99.9 1.1E-23 3.7E-28 180.0 9.9 130 44-178 135-273 (278)
105 3lvq_E ARF-GAP with SH3 domain 99.9 8.3E-24 2.8E-28 195.0 8.4 133 41-176 134-275 (497)
106 3aaa_C Myotrophin, protein V-1 99.9 6.3E-24 2.2E-28 158.9 3.0 113 36-148 4-116 (123)
107 3ehr_A Osteoclast-stimulating 99.9 4.4E-24 1.5E-28 176.2 2.0 142 101-270 69-211 (222)
108 2zgd_A 3 repeat synthetic anky 99.9 4.6E-22 1.6E-26 145.9 11.8 93 65-157 17-109 (110)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.2E-22 1.1E-26 142.1 8.6 92 104-223 1-92 (93)
110 3ui2_A Signal recognition part 99.9 3E-22 1E-26 167.8 7.7 109 38-147 44-153 (244)
111 3jue_A Arfgap with coiled-coil 99.9 5.5E-22 1.9E-26 175.5 9.5 122 42-163 202-326 (368)
112 3deo_A Signal recognition part 99.9 4.2E-22 1.4E-26 159.5 7.0 112 38-150 43-155 (183)
113 2l6b_A NR1C; ankyrin, consensu 99.8 2.4E-21 8.3E-26 142.9 6.5 109 100-236 4-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.8 2.9E-19 9.8E-24 130.9 7.0 93 98-218 17-109 (110)
115 4gt4_A Tyrosine-protein kinase 94.6 0.015 5.3E-07 49.5 2.5 78 195-274 33-118 (308)
116 4asz_A BDNF/NT-3 growth factor 94.4 0.02 6.7E-07 48.6 2.8 79 192-273 17-103 (299)
117 4aoj_A High affinity nerve gro 94.0 0.022 7.6E-07 49.0 2.3 81 191-274 44-132 (329)
118 3omv_A RAF proto-oncogene seri 93.6 0.048 1.6E-06 46.4 3.6 83 188-273 36-119 (307)
119 4b9d_A Serine/threonine-protei 91.0 0.089 3E-06 45.6 2.1 71 202-273 39-111 (350)
120 4ase_A Vascular endothelial gr 88.5 0.17 5.7E-06 43.9 1.8 89 183-273 59-157 (353)
121 3hmm_A TGF-beta receptor type- 87.8 0.091 3.1E-06 44.4 -0.3 69 201-273 17-89 (303)
122 4aw0_A HPDK1, 3-phosphoinositi 84.5 0.057 1.9E-06 46.0 -3.3 43 231-273 78-120 (311)
123 3p86_A Serine/threonine-protei 83.5 0.71 2.4E-05 38.8 3.2 82 191-273 40-122 (309)
124 3hyh_A Carbon catabolite-derep 83.0 0.27 9.4E-06 40.9 0.4 71 202-273 28-100 (275)
125 4fih_A Serine/threonine-protei 81.9 0.44 1.5E-05 41.1 1.3 69 202-273 89-159 (346)
126 4fie_A Serine/threonine-protei 81.6 0.48 1.6E-05 42.1 1.4 69 202-273 166-236 (423)
127 3fpq_A Serine/threonine-protei 80.6 0.35 1.2E-05 40.6 0.2 71 202-273 41-117 (290)
128 1opk_A P150, C-ABL, proto-onco 78.1 1.9 6.4E-05 39.0 4.2 86 184-273 216-304 (495)
129 3cbl_A C-FES, proto-oncogene t 77.3 2.2 7.5E-05 36.8 4.3 70 202-273 129-200 (377)
130 3uqc_A Probable conserved tran 75.6 1 3.6E-05 37.3 1.6 72 202-273 46-119 (286)
131 4g3f_A NF-kappa-beta-inducing 75.1 0.48 1.6E-05 40.7 -0.6 41 234-274 99-139 (336)
132 1k9a_A Carboxyl-terminal SRC k 70.0 1.7 6E-05 38.6 1.8 68 201-273 207-275 (450)
133 3gni_B Strad alpha; kinase fol 68.7 2 6.9E-05 37.1 1.9 71 202-273 42-114 (389)
134 4g31_A Eukaryotic translation 67.0 2.2 7.6E-05 35.7 1.8 69 203-273 21-103 (299)
135 3ubd_A Ribosomal protein S6 ki 66.4 1.2 4E-05 37.6 -0.1 40 234-273 75-114 (304)
136 3kmu_A ILK, integrin-linked ki 65.6 1.4 4.8E-05 35.6 0.2 72 201-273 24-97 (271)
137 4hcu_A Tyrosine-protein kinase 65.5 2.5 8.6E-05 34.2 1.8 43 231-273 51-93 (269)
138 3dtc_A Mitogen-activated prote 65.3 2.3 7.9E-05 34.4 1.5 72 202-273 22-94 (271)
139 4eqm_A Protein kinase; transfe 65.3 2 6.7E-05 35.6 1.1 64 210-273 36-99 (294)
140 3a8x_A Protein kinase C IOTA t 63.1 3 0.0001 35.5 1.9 64 210-273 34-98 (345)
141 1luf_A Muscle-specific tyrosin 62.2 5.8 0.0002 33.2 3.5 70 202-273 62-138 (343)
142 2nru_A Interleukin-1 receptor- 62.0 5.1 0.00018 33.0 3.1 72 202-273 46-118 (307)
143 3uto_A Twitchin; kinase, muscl 61.1 5 0.00017 37.0 3.1 43 231-273 200-242 (573)
144 2qol_A Ephrin receptor; recept 61.0 4 0.00014 35.2 2.3 60 212-273 75-134 (373)
145 3s95_A LIMK-1, LIM domain kina 60.1 5.3 0.00018 33.0 2.9 69 202-273 25-95 (310)
146 1x8b_A WEE1HU, WEE1-like prote 59.6 4.8 0.00016 32.6 2.5 71 202-273 26-99 (289)
147 2rku_A Serine/threonine-protei 59.2 3.9 0.00014 33.5 1.9 63 211-273 41-103 (294)
148 3kfa_A Tyrosine-protein kinase 58.3 6.2 0.00021 32.1 3.0 68 202-273 28-97 (288)
149 3fe3_A MAP/microtubule affinit 58.1 3.9 0.00014 34.5 1.8 70 203-273 31-102 (328)
150 4dc2_A Protein kinase C IOTA t 57.8 3 0.0001 36.4 1.0 63 211-273 78-141 (396)
151 2wqm_A Serine/threonine-protei 56.1 4.4 0.00015 33.5 1.7 72 202-273 47-120 (310)
152 2eva_A TAK1 kinase - TAB1 chim 55.4 7.2 0.00025 32.3 2.9 66 201-273 22-87 (307)
153 2owb_A Serine/threonine-protei 55.3 4.6 0.00016 34.0 1.7 62 212-273 68-129 (335)
154 2pml_X PFPK7, Ser/Thr protein 54.7 2.8 9.7E-05 35.3 0.3 74 201-274 45-132 (348)
155 3soc_A Activin receptor type-2 54.5 2.7 9.1E-05 35.3 0.1 88 182-273 18-110 (322)
156 2pvf_A Fibroblast growth facto 53.7 9.9 0.00034 31.8 3.6 43 231-273 86-129 (334)
157 2vd5_A DMPK protein; serine/th 52.8 1.9 6.4E-05 38.0 -1.2 42 232-273 108-149 (412)
158 2bdw_A Hypothetical protein K1 52.7 6.3 0.00021 33.7 2.2 70 203-273 45-116 (362)
159 2psq_A Fibroblast growth facto 52.4 9.3 0.00032 32.7 3.2 44 230-273 131-175 (370)
160 3l9p_A Anaplastic lymphoma kin 52.4 11 0.00037 32.2 3.6 44 230-273 119-162 (367)
161 3t9t_A Tyrosine-protein kinase 51.1 4.4 0.00015 32.5 0.8 43 231-273 49-91 (267)
162 3v5w_A G-protein coupled recep 51.0 3.8 0.00013 38.7 0.5 38 236-273 243-280 (689)
163 4aw2_A Serine/threonine-protei 50.8 1.6 5.5E-05 38.8 -2.0 42 232-273 121-162 (437)
164 3c0i_A Peripheral plasma membr 50.1 7.3 0.00025 33.1 2.1 43 231-273 72-114 (351)
165 3v8s_A RHO-associated protein 48.4 1.3 4.6E-05 38.9 -2.9 41 233-273 117-157 (410)
166 3hko_A Calcium/calmodulin-depe 48.1 8.7 0.0003 32.2 2.3 44 230-273 73-116 (345)
167 3fxz_A Serine/threonine-protei 47.4 8.7 0.0003 31.6 2.1 42 232-273 64-105 (297)
168 3sxs_A Cytoplasmic tyrosine-pr 47.0 14 0.00049 29.5 3.4 43 231-273 49-91 (268)
169 1gp8_A Protein (scaffolding pr 46.9 15 0.00051 20.2 2.2 18 75-92 16-33 (40)
170 1o6l_A RAC-beta serine/threoni 46.8 2.1 7E-05 36.5 -1.9 41 233-273 53-93 (337)
171 3gen_A Tyrosine-protein kinase 46.7 11 0.00039 30.4 2.7 43 231-273 65-107 (283)
172 4agu_A Cyclin-dependent kinase 46.2 7.9 0.00027 31.9 1.7 63 210-273 28-90 (311)
173 1u5q_A Serine/threonine protei 46.2 6.2 0.00021 33.6 1.0 67 202-268 69-137 (348)
174 4aaa_A Cyclin-dependent kinase 45.4 9.4 0.00032 31.9 2.1 71 202-273 40-112 (331)
175 1fmk_A C-SRC, P60-SRC, tyrosin 45.4 12 0.00042 33.0 3.0 78 191-273 187-266 (452)
176 1fot_A TPK1 delta, CAMP-depend 45.1 1.9 6.4E-05 36.4 -2.4 40 234-273 55-94 (318)
177 2yfx_A Tyrosine-protein kinase 44.9 15 0.00051 30.5 3.3 60 212-273 62-121 (327)
178 4fvq_A Tyrosine-protein kinase 44.4 12 0.00041 30.3 2.6 43 231-273 58-100 (289)
179 3txo_A PKC-L, NPKC-ETA, protei 44.3 3.4 0.00012 35.4 -0.9 40 234-273 72-112 (353)
180 2h34_A Serine/threonine-protei 44.3 4.4 0.00015 33.6 -0.2 72 202-273 49-122 (309)
181 3nyv_A Calmodulin-domain prote 44.2 4.6 0.00016 36.0 -0.1 64 210-273 51-114 (484)
182 3vhe_A Vascular endothelial gr 44.2 9.3 0.00032 32.2 1.9 44 230-273 70-115 (359)
183 3tt0_A Basic fibroblast growth 43.3 15 0.00053 31.4 3.2 44 230-273 119-163 (382)
184 3uc3_A Serine/threonine-protei 43.2 7.3 0.00025 33.3 1.0 67 203-273 36-104 (361)
185 2h6d_A 5'-AMP-activated protei 43.1 4 0.00014 33.0 -0.7 42 232-273 58-99 (276)
186 3tki_A Serine/threonine-protei 43.0 11 0.00036 31.6 2.0 44 231-274 51-94 (323)
187 4azs_A Methyltransferase WBDD; 43.0 7.1 0.00024 35.9 1.0 65 209-273 258-330 (569)
188 1rjb_A FL cytokine receptor; k 42.2 13 0.00043 31.2 2.4 43 231-273 94-137 (344)
189 1rdq_E PKA C-alpha, CAMP-depen 42.0 2.4 8.2E-05 36.3 -2.2 41 233-273 89-129 (350)
190 1qcf_A Haematopoetic cell kina 41.8 7.4 0.00025 34.4 0.9 80 189-273 189-270 (454)
191 2vuw_A Serine/threonine-protei 41.6 10 0.00035 31.7 1.8 30 244-273 108-150 (336)
192 1b6c_B TGF-B superfamily recep 41.5 17 0.00058 30.2 3.1 67 201-273 56-128 (342)
193 2i1m_A Macrophage colony-stimu 41.3 13 0.00045 30.9 2.4 44 230-273 94-138 (333)
194 4b99_A Mitogen-activated prote 41.2 13 0.00045 32.4 2.4 69 202-272 69-145 (398)
195 3lb7_A RAF proto-oncogene seri 41.0 16 0.00055 30.1 2.9 68 203-273 52-119 (307)
196 4f9c_A Cell division cycle 7-r 40.9 11 0.00038 32.4 1.8 40 234-273 68-108 (361)
197 1tki_A Titin; serine kinase, m 40.7 15 0.00051 30.7 2.6 43 231-273 47-89 (321)
198 2ivs_A Proto-oncogene tyrosine 40.7 14 0.00048 30.3 2.4 60 212-273 55-114 (314)
199 1p4o_A Insulin-like growth fac 40.6 12 0.0004 31.0 1.9 43 231-273 74-116 (322)
200 3kul_A Ephrin type-A receptor 40.5 11 0.00037 31.5 1.7 59 213-273 80-138 (325)
201 3ork_A Serine/threonine protei 40.2 2 6.9E-05 35.8 -3.0 72 202-273 27-104 (311)
202 2x4f_A Myosin light chain kina 40.1 12 0.00041 32.1 2.0 69 202-273 104-174 (373)
203 2y0a_A Death-associated protei 40.0 14 0.00048 30.8 2.3 43 231-273 60-102 (326)
204 3kk8_A Calcium/calmodulin depe 40.0 12 0.0004 30.3 1.8 63 210-273 31-93 (284)
205 2h8h_A Proto-oncogene tyrosine 39.8 11 0.00038 34.1 1.8 79 190-273 269-349 (535)
206 1t46_A HOMO sapiens V-KIT hard 39.4 15 0.00051 30.1 2.4 44 230-273 71-115 (313)
207 4fr4_A YANK1, serine/threonine 38.8 2.4 8.3E-05 36.9 -2.7 42 232-273 62-103 (384)
208 3mdy_A Bone morphogenetic prot 38.8 5.5 0.00019 33.2 -0.4 69 201-273 51-123 (337)
209 3soa_A Calcium/calmodulin-depe 38.7 9 0.00031 33.9 0.9 44 230-273 55-98 (444)
210 2y94_A 5'-AMP-activated protei 38.5 4.1 0.00014 36.6 -1.3 72 202-273 31-104 (476)
211 2qkw_B Protein kinase; three-h 38.3 11 0.00036 31.4 1.3 44 231-274 81-124 (321)
212 2w5a_A Serine/threonine-protei 38.1 11 0.00038 30.4 1.3 70 203-273 22-95 (279)
213 2acx_A G protein-coupled recep 37.8 4.2 0.00014 37.6 -1.4 41 233-273 232-272 (576)
214 3lij_A Calcium/calmodulin depe 37.1 7.2 0.00024 34.9 0.0 71 202-273 52-124 (494)
215 2eue_A Carbon catabolite derep 36.9 10 0.00035 30.6 0.9 59 210-268 38-96 (275)
216 1xjd_A Protein kinase C, theta 36.5 4 0.00014 34.8 -1.7 32 242-273 75-106 (345)
217 3a62_A Ribosomal protein S6 ki 36.4 13 0.00044 31.1 1.5 42 232-273 68-109 (327)
218 3c4z_A Rhodopsin kinase; Ser/T 36.1 4.7 0.00016 36.9 -1.4 42 232-273 232-273 (543)
219 3is5_A Calcium-dependent prote 35.5 15 0.0005 29.9 1.7 43 231-273 66-108 (285)
220 3eqc_A Dual specificity mitoge 35.4 13 0.00043 31.5 1.3 70 202-273 48-119 (360)
221 1u46_A ACK-1, activated CDC42 35.2 31 0.0011 27.7 3.7 44 229-273 65-108 (291)
222 3gxj_A TGF-beta receptor type- 35.0 7.6 0.00026 31.7 -0.2 66 202-273 18-89 (303)
223 2yab_A Death-associated protei 34.9 13 0.00044 31.8 1.3 42 232-273 62-103 (361)
224 2ac3_A MAP kinase-interacting 34.9 18 0.00061 29.8 2.1 61 210-273 38-99 (316)
225 3zgw_A Maternal embryonic leuc 34.9 20 0.00068 30.4 2.5 70 202-273 25-96 (347)
226 3p1a_A MYT1 kinase, membrane-a 34.5 20 0.00069 29.5 2.4 70 202-272 72-143 (311)
227 3f3z_A Calcium/calmodulin-depe 34.5 16 0.00056 29.3 1.8 42 232-273 53-94 (277)
228 1mqb_A Ephrin type-A receptor 34.4 19 0.00063 30.1 2.2 44 230-273 91-134 (333)
229 4euu_A Serine/threonine-protei 34.0 21 0.00073 29.4 2.5 42 232-273 54-97 (319)
230 3zrh_A Ubiquitin thioesterase 33.8 1.2E+02 0.004 26.6 6.9 49 78-126 28-90 (454)
231 3q5i_A Protein kinase; CDPK, m 33.5 17 0.00057 32.6 1.9 43 231-273 92-134 (504)
232 2j7t_A Serine/threonine-protei 33.5 18 0.0006 29.5 1.9 69 202-273 34-104 (302)
233 1u59_A Tyrosine-protein kinase 33.2 27 0.00094 28.1 3.0 61 210-273 37-97 (287)
234 3og7_A AKAP9-BRAF fusion prote 33.1 14 0.00048 30.1 1.2 68 203-273 40-107 (289)
235 3lm5_A Serine/threonine-protei 33.1 12 0.00042 31.2 0.8 64 210-274 54-118 (327)
236 3zrh_A Ubiquitin thioesterase 33.0 1.2E+02 0.0041 26.5 6.9 49 113-161 30-92 (454)
237 2y4i_B KSR2, HKSR2, kinase sup 32.7 4.9 0.00017 33.3 -1.7 40 234-273 78-117 (319)
238 3bhy_A Death-associated protei 31.9 23 0.00079 28.4 2.3 43 231-273 54-96 (283)
239 1kob_A Twitchin; kinase, intra 31.8 20 0.00069 30.9 2.0 43 231-273 94-136 (387)
240 3qd2_B Eukaryotic translation 31.8 22 0.00077 29.2 2.3 51 202-254 21-73 (332)
241 3cok_A Serine/threonine-protei 31.4 3.3 0.00011 33.6 -3.0 42 232-273 58-99 (278)
242 3a7i_A MST3 kinase, serine/thr 31.1 22 0.00075 29.0 2.1 70 202-273 37-108 (303)
243 2a2a_A Death-associated protei 30.9 22 0.00077 29.3 2.1 43 231-273 61-103 (321)
244 3fdn_A Serine/threonine-protei 30.7 3.3 0.00011 33.7 -3.1 42 232-273 56-97 (279)
245 1byg_A CSK, protein (C-termina 30.6 10 0.00036 30.5 -0.0 68 201-273 35-103 (278)
246 2y7j_A Phosphorylase B kinase 30.4 14 0.00049 31.4 0.9 72 202-273 109-188 (365)
247 2zv2_A Calcium/calmodulin-depe 30.4 26 0.00088 28.5 2.4 44 231-274 82-127 (298)
248 3f66_A Hepatocyte growth facto 30.4 33 0.0011 27.8 3.0 47 227-273 68-115 (298)
249 2yex_A Serine/threonine-protei 30.1 19 0.00065 28.8 1.5 70 202-273 22-93 (276)
250 4f0f_A Serine/threonine-protei 30.1 34 0.0012 27.5 3.1 70 202-273 34-109 (287)
251 3ugc_A Tyrosine-protein kinase 30.0 18 0.00063 29.3 1.4 61 210-273 39-101 (295)
252 3brb_A Proto-oncogene tyrosine 30.0 45 0.0015 27.2 3.9 60 213-273 65-129 (313)
253 2buj_A Serine/threonine-protei 29.5 14 0.00046 30.5 0.5 68 203-273 45-118 (317)
254 2wei_A Calmodulin-domain prote 29.2 11 0.00038 30.6 -0.1 70 203-273 38-109 (287)
255 3kn6_A Ribosomal protein S6 ki 29.2 29 0.00098 28.9 2.5 40 234-273 54-94 (325)
256 3mwu_A Calmodulin-domain prote 29.2 24 0.00082 31.3 2.1 42 232-273 68-109 (486)
257 3niz_A Rhodanese family protei 28.9 30 0.001 28.5 2.5 66 203-269 37-103 (311)
258 4ejn_A RAC-alpha serine/threon 28.9 2.8 9.4E-05 37.1 -4.2 38 236-273 199-236 (446)
259 3q4u_A Activin receptor type-1 28.8 12 0.00041 30.5 0.0 66 202-273 23-94 (301)
260 2c30_A Serine/threonine-protei 28.7 16 0.00056 30.3 0.9 70 202-274 60-131 (321)
261 2vgo_A Serine/threonine-protei 28.7 4 0.00014 33.3 -2.9 42 232-273 61-102 (284)
262 3lxl_A Tyrosine-protein kinase 28.3 25 0.00084 29.1 1.9 61 210-273 52-114 (327)
263 3uim_A Brassinosteroid insensi 28.2 17 0.00058 30.0 0.9 42 232-273 74-115 (326)
264 4fl3_A Tyrosine-protein kinase 28.0 13 0.00046 34.5 0.2 60 212-273 398-457 (635)
265 3lxp_A Non-receptor tyrosine-p 27.9 23 0.00078 29.3 1.7 62 210-273 60-123 (318)
266 2qr7_A Ribosomal protein S6 ki 27.7 19 0.00065 30.4 1.1 32 242-273 73-104 (342)
267 2w4o_A Calcium/calmodulin-depe 27.2 17 0.00059 30.6 0.8 42 232-273 95-136 (349)
268 1fvr_A Tyrosine-protein kinase 26.7 17 0.00057 30.2 0.5 42 232-273 72-114 (327)
269 1mp8_A Focal adhesion kinase 1 26.5 36 0.0012 27.3 2.6 43 230-273 61-103 (281)
270 2jam_A Calcium/calmodulin-depe 26.0 30 0.001 28.2 2.1 42 232-273 53-94 (304)
271 2r5t_A Serine/threonine-protei 25.3 19 0.00064 30.9 0.6 33 241-273 95-127 (373)
272 3en9_A Glycoprotease, O-sialog 25.0 25 0.00087 31.9 1.5 72 202-273 351-427 (540)
273 4eut_A Serine/threonine-protei 24.9 26 0.00089 30.1 1.5 69 203-273 25-97 (396)
274 3h4j_B AMPK kdaid, SNF1-like p 24.8 4.2 0.00015 34.5 -3.6 41 232-273 56-96 (336)
275 1phk_A Phosphorylase kinase; g 24.5 41 0.0014 27.1 2.6 40 234-273 72-112 (298)
276 3cc6_A Protein tyrosine kinase 24.5 63 0.0022 25.7 3.8 44 229-273 57-100 (281)
277 2pzi_A Probable serine/threoni 24.3 14 0.00047 34.7 -0.5 71 202-274 95-173 (681)
278 3qup_A Tyrosine-protein kinase 24.1 19 0.00066 29.7 0.5 44 230-273 70-119 (323)
279 1xbb_A Tyrosine-protein kinase 23.9 14 0.00049 30.0 -0.4 61 211-273 45-105 (291)
280 3com_A Serine/threonine-protei 23.7 22 0.00077 29.1 0.8 66 203-273 45-112 (314)
281 4e5w_A Tyrosine-protein kinase 23.7 37 0.0013 27.4 2.2 63 209-273 49-113 (302)
282 3g2f_A Bone morphogenetic prot 23.6 16 0.00053 30.4 -0.2 68 202-273 28-100 (336)
283 2ozo_A Tyrosine-protein kinase 23.5 30 0.001 32.0 1.7 43 230-273 381-423 (613)
284 3pls_A Macrophage-stimulating 23.2 57 0.002 26.2 3.3 45 229-273 66-111 (298)
285 2clq_A Mitogen-activated prote 23.2 20 0.00067 29.0 0.3 43 231-273 65-107 (295)
286 2j0j_A Focal adhesion kinase 1 22.6 62 0.0021 30.1 3.7 44 229-273 435-478 (656)
287 2w1i_A JAK2; chromosomal rearr 22.0 43 0.0015 27.6 2.3 61 210-273 70-132 (326)
288 3o0g_A Cell division protein k 21.5 20 0.00068 29.1 0.0 59 210-269 27-85 (292)
289 3i6u_A CDS1, serine/threonine- 21.0 50 0.0017 28.6 2.5 42 232-274 187-228 (419)
No 1
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=281.18 Aligned_cols=241 Identities=17% Similarity=0.103 Sum_probs=190.3
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCC-----------CCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQ-----------DELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID 102 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~ 102 (294)
+......+.++.++..|+...+..++.. .......+..|.||||+||..|+.++|++|+++|++++.+|
T Consensus 10 ~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~ 89 (285)
T 3d9h_A 10 HSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT 89 (285)
T ss_dssp --------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEEC
T ss_pred ccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 3445666777888888887666663222 12235578889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCccccCCC--
Q 022605 103 LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT--KRTPMTVANPR-- 178 (294)
Q Consensus 103 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~t~l~~a~~~-- 178 (294)
..|.||||+|+..|+.++|++|+++|++++..|..|+||||+|+..|+.+++++|++.|++++.. |.||||+|+..
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGH 169 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTC
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998644 99999999764
Q ss_pred -CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 179 -EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 179 -~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
+++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.+.... .+..|.||||+|+..++.+++++|...+.+
T Consensus 170 ~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 170 VECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGAD 247 (285)
T ss_dssp HHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 5567777654 5677788899999999999999999999998876555 477899999999999999999999998876
Q ss_pred CCeEEEEecCCCCCCCccccccccccc
Q 022605 258 IPMMIVLEYHAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 258 ~~l~~~~e~~~~g~l~~t~l~~a~~n~ 284 (294)
....+..|.|||++|+.+.
T Consensus 248 --------~~~~d~~g~t~l~~A~~~~ 266 (285)
T 3d9h_A 248 --------TQAKNAEGKRPVELVPPES 266 (285)
T ss_dssp --------TTCCCTTSCCGGGGSCTTS
T ss_pred --------CCCcCCCCCCHHHHhcCcc
Confidence 4557888999999999654
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=276.74 Aligned_cols=206 Identities=19% Similarity=0.147 Sum_probs=181.8
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+|+||||+||..|+.++|++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCC--CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCC
Q 022605 151 VEVYNILKARGAKVPKT--KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~--~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
.+++++|+++|++++.. |.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.+.+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 160 (261)
T ss_dssp HHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 99999999999998644 89999999765 4566676654 667778888999999999999999999999888665
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
. .+..|.||+|+|+..++.+++++|...+.+ ....+..|.|||++|+.++++
T Consensus 161 ~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad--------~~~~d~~g~tpl~~A~~~~~~ 212 (261)
T 2xai_A 161 N-QGKGQDSPLHAVARTASEELACLLMDFGAD--------TQAKNAEGKRPVELVPPESPL 212 (261)
T ss_dssp T-CCBTTBCHHHHHHHHTCHHHHHHHHHTTCC--------TTCCCTTSCCGGGGSCTTCTH
T ss_pred C-CCCCCCChHHHHHHcCCHHHHHHHHHcCCC--------CCCcCCCCCChhhhccccccH
Confidence 5 477889999999999999999999999886 445778899999999977653
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=9.5e-39 Score=266.50 Aligned_cols=213 Identities=23% Similarity=0.176 Sum_probs=192.4
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
...+..|.||||+||..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCC-CCCCC---CCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhh
Q 022605 146 KYYGNVEVYNILKARG-AKVPK---TKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKIL 218 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~g-a~~~~---~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L 218 (294)
+..|+.+++++|++.| ++++. .|.||||+|+.. +++++|+..+ .+++..+..|.||||.|+..|+.+++++|
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 9999999999999998 67654 499999999765 4566777644 56677788899999999999999999999
Q ss_pred hccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccc
Q 022605 219 DKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTH 287 (294)
Q Consensus 219 l~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~ 287 (294)
++.+......+..|.||+|+|+..++.+++++|...+.+ ....+..|.|||++|+.+++..
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad--------~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD--------VTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC--------TTCCCTTSCCHHHHSCTTCHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC--------CCccCCCCCCHHHHHHHHHHHH
Confidence 999988777778899999999999999999999998876 4456788999999999999763
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.4e-39 Score=282.94 Aligned_cols=236 Identities=21% Similarity=0.163 Sum_probs=205.5
Q ss_pred CCCccccccCCCCCccccCCCCC-CCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH 117 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~ 117 (294)
..+.++.++..++.+.++.++.. +......+..|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCC
Confidence 34567888889999988887776 44556778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------------------------
Q 022605 118 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPK------------------------------- 166 (294)
Q Consensus 118 ~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------------------- 166 (294)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 104 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~ 183 (351)
T 3utm_A 104 YEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLL 183 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHH
Confidence 9999999999999999999999999999999999999999999998753
Q ss_pred --------------------------CCCCCccccCCC------CCcccccCcchhhhhcccCCCCCceeeeeecCchhh
Q 022605 167 --------------------------TKRTPMTVANPR------EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVW 214 (294)
Q Consensus 167 --------------------------~~~t~l~~a~~~------~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~ 214 (294)
.|.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.++
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~ 262 (351)
T 3utm_A 184 QAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPLHVAAERAHNDV 262 (351)
T ss_dssp HHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHHcCCHHH
Confidence 255777776443 2445555543 5677788889999999999999999
Q ss_pred hHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccc
Q 022605 215 VKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFH 283 (294)
Q Consensus 215 v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n 283 (294)
+++|++.+.+....+..|.||||+|+..|+.+++++|...++++ ...+..|.||+++|...
T Consensus 263 v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~--------~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 263 MEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDP--------SIISLQGFTAAQMGNEA 323 (351)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHSCHH
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC--------CCcCCCCCChhhhhhHH
Confidence 99999999888878889999999999999999999999999874 34677788999998543
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.4e-39 Score=272.44 Aligned_cols=203 Identities=18% Similarity=0.117 Sum_probs=107.1
Q ss_pred CCccccCCCCCCCCCCC-CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 022605 51 SLDPIRRSPVQDELTVP-ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 129 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga 129 (294)
..+.++.++..+..... .+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45555555555544433 35566666666666666666666666666666666666666666666666666666666655
Q ss_pred -CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCc
Q 022605 130 -NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGS 202 (294)
Q Consensus 130 -d~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~ 202 (294)
+++..+..|.||||+|+..|+.+++++|++.|++++.. |+||||+|+.. +++++|+..+ .+++..+..|.||
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tp 193 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETP 193 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCH
Confidence 56666666666666666666666666666666665432 55555555432 3344444332 3444445555555
Q ss_pred eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh
Q 022605 203 YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~ 254 (294)
||+|+..|+.+++++|++.|++....+..|.||+++|++.|+.+|+++|...
T Consensus 194 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred HHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 5555555555555555555554444445555555555555555555555443
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2e-39 Score=276.92 Aligned_cols=241 Identities=22% Similarity=0.183 Sum_probs=208.4
Q ss_pred CCccccccCCCCCccccCCCCCCCCCCCC-CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDELTVPE-NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
.+.++.++..++.+.++.++..+...... +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSV 85 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 34566677788888888888877666555 77899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-------------CCCCccccCCC---CCcc
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT-------------KRTPMTVANPR---EVPE 182 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-------------~~t~l~~a~~~---~~~~ 182 (294)
+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|++++.. |.||||+|+.. ++++
T Consensus 86 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 165 (285)
T 1wdy_A 86 KLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 165 (285)
T ss_dssp HHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999999999999999988543 88999999654 5667
Q ss_pred cccCcchhhhhcccCCCCCceeeeeecCc----hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh-hcCC
Q 022605 183 YELNPLELQVRKADGITKGSYQVAKWNGT----KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA-VTQN 257 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~t~l~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~-~~~~ 257 (294)
+|+...+.+++..+..|.||||.|+..++ .+++++|++.+......+..|.||+|+|+..++.+++++|.. .+.+
T Consensus 166 ~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~ 245 (285)
T 1wdy_A 166 ILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245 (285)
T ss_dssp HHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC
T ss_pred HHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC
Confidence 77766457777888889999999999999 889999999888777777889999999999999999999988 5654
Q ss_pred CCeEEEEecCCCCCCCccccccccccccccc
Q 022605 258 IPMMIVLEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 258 ~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
....+..|.||||+|+.+++..+
T Consensus 246 --------~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 246 --------INDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred --------ccccCCCCCcHHHHHHHcCcHHH
Confidence 44567788999999999987654
No 7
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.7e-38 Score=271.18 Aligned_cols=209 Identities=22% Similarity=0.243 Sum_probs=182.5
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
..+.+|.||||.||..|+.++|++|+++|+++|.+|..|.||||+||..|+.++|++|+++|++++..|..|+||||+|+
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCC---cccccCcchhhh--------------------------hc
Q 022605 147 YYGNVEVYNILKARGAKVPKT---KRTPMTVANPREV---PEYELNPLELQV--------------------------RK 194 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~---~~~l~~~~~~~~--------------------------~~ 194 (294)
..|+.+++++|+++|++++.. |.||||+|+..+. +++++.....++ ..
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 999999999999999998644 9999999987543 333332211111 12
Q ss_pred ccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 195 ADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 195 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
.+..|.||||+|+..|+.+++++|++.+.+....+..|.||||+|+..|+.+++++|...+.++ ...+..|.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~--------~~~d~~g~ 266 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM--------EAVNKVGQ 266 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTSC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC--------CCcCCCCC
Confidence 3456889999999999999999999999887777889999999999999999999999998764 45688899
Q ss_pred ccccccccc
Q 022605 275 TPFLTLSFH 283 (294)
Q Consensus 275 t~l~~a~~n 283 (294)
|||++|...
T Consensus 267 t~l~~A~~~ 275 (299)
T 1s70_B 267 TAFDVADED 275 (299)
T ss_dssp CTTTSCCSG
T ss_pred CHHHHHHHH
Confidence 999999764
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.2e-39 Score=273.58 Aligned_cols=211 Identities=17% Similarity=0.086 Sum_probs=168.7
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSD---VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 142 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L 142 (294)
...+..|.||||+||..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.++|++|+++|++++..|..|+|||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 45678899999999999999999999999988 888999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCC-----------------------------------------------C---CCCCCCCc
Q 022605 143 ADAKYYGNVEVYNILKARGAK-----------------------------------------------V---PKTKRTPM 172 (294)
Q Consensus 143 ~~A~~~g~~~~v~~Ll~~ga~-----------------------------------------------~---~~~~~t~l 172 (294)
|+|+..|+.+++++|+++|++ + +..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 999999999999999998865 2 23388999
Q ss_pred cccCCC---CCcccccCcchhhhhcccC-CCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchh
Q 022605 173 TVANPR---EVPEYELNPLELQVRKADG-ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVV 248 (294)
Q Consensus 173 ~~a~~~---~~~~~l~~~~~~~~~~~~~-~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv 248 (294)
|+|+.. +++++|+..+ .+++..+. .|.||||+|+..|+.++|++|++.|+.....+..|.||+|+|+..++.+++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 988664 4566666544 45555554 488999999999999999999988887777778888999999999999999
Q ss_pred hhhhhhcCCCCeEEEEecCCCCCCCcccccccccccc
Q 022605 249 QFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQ 285 (294)
Q Consensus 249 ~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~ 285 (294)
++|...++++ ...+..|.|||++|....+
T Consensus 242 ~~Ll~~ga~~--------~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 242 RLLRAHGAPE--------PEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHTTCCC--------CCCC---------------
T ss_pred HHHHHcCCCc--------CcCCCcccccccccCCccc
Confidence 9998888874 4567778899998876543
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.6e-38 Score=263.35 Aligned_cols=217 Identities=19% Similarity=0.147 Sum_probs=189.6
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHh----cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLN----EGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTA 141 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~----~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~ 141 (294)
...|.+|.||||+||..|+.++|++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 3567889999999999999999999997 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCC----CCC---CCCCCCccccCCC---CCcccccCcchhhhhccc-CCCCCceeeeeecC
Q 022605 142 AADAKYYGNVEVYNILKARGA----KVP---KTKRTPMTVANPR---EVPEYELNPLELQVRKAD-GITKGSYQVAKWNG 210 (294)
Q Consensus 142 L~~A~~~g~~~~v~~Ll~~ga----~~~---~~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~-~~~~t~l~~A~~~g 210 (294)
||+|+..|+.+++++|++.++ +++ ..|.||||+|+.. +++++|+..+ .+++..+ ..|.||||+|+..|
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHHHHcC
Confidence 999999999999999999987 554 3499999999654 4566777654 4555555 67899999999999
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTSG 290 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~~ 290 (294)
+.+++++|++.+.+....+..|.||+|+|+..++.+++++|...+.++ ...+..|.|||++|+.+++..++-
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--------~~~~~~g~tpl~~A~~~~~~~i~~ 233 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS--------SLKNCHNDTPLMVARSRRVIDILR 233 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC--------CCcCCCCCCHHHHHHhcCcHHHHh
Confidence 999999999999888777888999999999999999999999988864 446778999999999999887654
Q ss_pred C
Q 022605 291 G 291 (294)
Q Consensus 291 ~ 291 (294)
.
T Consensus 234 ~ 234 (241)
T 1k1a_A 234 G 234 (241)
T ss_dssp C
T ss_pred h
Confidence 3
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.6e-38 Score=266.98 Aligned_cols=189 Identities=21% Similarity=0.232 Sum_probs=143.5
Q ss_pred CCchhHHHHHHHcC-------------CHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q 022605 70 LDSTMQLLFMACRG-------------DVKGVEDLLNEGSDVNS-IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD 135 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g-------------~~~~v~~Ll~~g~~~~~-~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~ 135 (294)
.+|.||||+|+..| +.+++++|+++|++++. .|..|+||||+|+..|+.++|++|+++|++++..|
T Consensus 8 ~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 87 (253)
T 1yyh_A 8 PDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD 87 (253)
T ss_dssp --------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 46899999999987 89999999999999865 58999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCC---CCCCCccccCC---CCCcccccCcchhhhhcccCCCCCceeeeee
Q 022605 136 RWGSTAAADAKYYGNVEVYNILKARGA-KVPK---TKRTPMTVANP---REVPEYELNPLELQVRKADGITKGSYQVAKW 208 (294)
Q Consensus 136 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~---~~~t~l~~a~~---~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~ 208 (294)
..|+||||+|+..|+.+++++|++.|+ +++. .|.||||+|+. .+++++|+..+ .+++..+..|.||||+|+.
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAA 166 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCBHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999987 6644 49999999965 46677777654 6777788889999999999
Q ss_pred cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC
Q 022605 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~ 259 (294)
.|+.+++++|++.++.....+..|.||+|+|+..++.+++++|...+.++.
T Consensus 167 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 167 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 999999999999998887788889999999999999999999999988764
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=269.70 Aligned_cols=211 Identities=16% Similarity=0.101 Sum_probs=154.7
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCC--------CCCCCCCCCcHHHHHHHcCcH-HHHHHHHhCCCCCCCCCCC
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSD--------VNSIDLDGRTALHIAACEGHV-EVVKLLLSKKANIDARDRW 137 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--------~~~~~~~g~TpLh~A~~~g~~-~~v~~Ll~~gad~~~~~~~ 137 (294)
..|..+.+||+.||..|+.++|++||+.|++ ++..+..|.||||+|+..++. .++++|++.|+|+|..|.+
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 4566788899999999999999999988764 456677888999999887765 4788999999999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCc
Q 022605 138 GSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGT 211 (294)
Q Consensus 138 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~ 211 (294)
|+||||+|+..|+.++|++|++.|++++.. |.||+++|+.. +++++|+..+ .+++..+..|.||||+|+..|+
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCC
Confidence 999999999999999999999999888544 88999988553 4566666544 5667778889999999999999
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
.++|++|++.|++....+..|.||||+|+..|+.++|++|+..++++ ...+..|.||||+|+.|+++
T Consensus 165 ~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~--------~~~d~~G~TpL~~A~~~~~i 231 (269)
T 4b93_B 165 HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV--------QVLNKRQRTAVDCAEQNSKI 231 (269)
T ss_dssp GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS--------CCCCTTSCCSGGGSCTTCHH
T ss_pred HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC--------CCcCCCCCCHHHHHHhCCcH
Confidence 99999999999888778888999999999999999999999998874 44677889999999998863
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=275.69 Aligned_cols=241 Identities=16% Similarity=0.113 Sum_probs=207.6
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 45667778888999999999988888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhh
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQV 192 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~ 192 (294)
+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.. |+||||+|+.. +++++|++.+ .++
T Consensus 83 ~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 160 (261)
T 2xai_A 83 DCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG-ADV 160 (261)
T ss_dssp HHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT-CCT
T ss_pred HHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCC
Confidence 999999999999986 456999999999999999999999999998654 89999999765 4567777654 444
Q ss_pred hcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 193 RKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 193 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
+. +..|.||||+|+..|+.+++++|++.|++....+..|.||+++|+. +.+++++|...+..+.+.-..+...+...
T Consensus 161 ~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~--~~~~~~~ll~~~~~~~l~~~~~~~~r~~~ 237 (261)
T 2xai_A 161 NQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGPPSLMQLCRLRIRKCF 237 (261)
T ss_dssp TC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TCTHHHHHHHC-CCCCHHHHHHHHHHTTS
T ss_pred CC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc--cccHHHHHHhccCCccHHHHHHHHHHHHh
Confidence 43 6778999999999999999999999998888888999999999984 45799999888776554333344556888
Q ss_pred Cccccccccccc
Q 022605 273 PITPFLTLSFHK 284 (294)
Q Consensus 273 ~~t~l~~a~~n~ 284 (294)
|.||+|.|....
T Consensus 238 g~t~l~~~~~~~ 249 (261)
T 2xai_A 238 GIQQHHKITKLV 249 (261)
T ss_dssp CTTCGGGGGGSS
T ss_pred chhccccCcccC
Confidence 999999988643
No 13
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-38 Score=284.24 Aligned_cols=243 Identities=18% Similarity=0.123 Sum_probs=179.8
Q ss_pred CCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
..+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..|
T Consensus 144 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 223 (437)
T 1n11_A 144 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 223 (437)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence 34445556666666666666666666666666667777777777777777777777777777777777777777777777
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchh
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLEL 190 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~ 190 (294)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.. |.||||+|+.. +++++|+..+ .
T Consensus 224 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~ 302 (437)
T 1n11_A 224 QVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-V 302 (437)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-C
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-c
Confidence 777777777777777777777777777777777777777777777776433 77777777543 3455555443 5
Q ss_pred hhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCC
Q 022605 191 QVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKV 270 (294)
Q Consensus 191 ~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g 270 (294)
+++..+..|.||||+|+..|+.++|++|++.+++....+..|.||||+|+..|+.++|++|...++++ ...+
T Consensus 303 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~--------~~~~ 374 (437)
T 1n11_A 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP--------NEVS 374 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS--------CCCC
T ss_pred cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC--------CCCC
Confidence 56667777888888888888888888888888777777778888888888888888888888888764 3456
Q ss_pred CCCccccccccccccccc
Q 022605 271 SMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 271 ~l~~t~l~~a~~n~~~~~ 288 (294)
..|.|||++|..++...+
T Consensus 375 ~~g~t~l~~A~~~g~~~~ 392 (437)
T 1n11_A 375 SDGTTPLAIAKRLGYISV 392 (437)
T ss_dssp SSSCCHHHHHHHTTCHHH
T ss_pred CCCCCHHHHHHHcCcHHH
Confidence 678889998888876543
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-38 Score=282.11 Aligned_cols=242 Identities=13% Similarity=0.091 Sum_probs=197.6
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCC-CCchhHHHHHHHcCCHHHHHHHH--------hcCCCCCCCCCCCC
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPEN-LDSTMQLLFMACRGDVKGVEDLL--------NEGSDVNSIDLDGR 106 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll--------~~g~~~~~~~~~g~ 106 (294)
++.+.+.++.++. ++.+.+..+.. . .....+ ..|.||||+||..|+.++|++|+ +.|+++|.+|..|.
T Consensus 91 ~~~g~t~L~~Aa~-~~~~~~~~L~~-~-~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~ 167 (373)
T 2fo1_E 91 EPESPIKLHTEAA-GSYAITEPITR-E-SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN 167 (373)
T ss_dssp ---CCCHHHHHHH-SSSCCCSCCST-T-TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSC
T ss_pred CCCCccHHHHHhc-CCchHHHHhcc-c-cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 4445555665555 55555555543 2 333444 78999999999999998888776 78999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCC---CCCCCCccccCCC--
Q 022605 107 TALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG---AKVP---KTKRTPMTVANPR-- 178 (294)
Q Consensus 107 TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~---~~~~t~l~~a~~~-- 178 (294)
||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++.| ++++ ..|.||||+|+..
T Consensus 168 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 247 (373)
T 2fo1_E 168 TPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG 247 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCS
T ss_pred CHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999987 6664 4499999999654
Q ss_pred ----CCcccccCcchhhhh--------cccCCCCCceeeeeecCchhhhHhhhccC-CCChHhhhhhhhHHHHHHHcCCC
Q 022605 179 ----EVPEYELNPLELQVR--------KADGITKGSYQVAKWNGTKVWVKILDKES-HKDPERINAFTHELTIVEKARHP 245 (294)
Q Consensus 179 ----~~~~~l~~~~~~~~~--------~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~~ 245 (294)
+++++|+..+ .+++ ..+..|.||||+|+..|+.++|++|++.+ ......+..|.||||+|+..|+.
T Consensus 248 ~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~ 326 (373)
T 2fo1_E 248 RDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 326 (373)
T ss_dssp TTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH
Confidence 3456666554 2222 24567899999999999999999999876 55556677899999999999999
Q ss_pred chhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 246 NVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 246 ~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
++|++|...+.+ ....+..|.|||++|+.+++..++
T Consensus 327 ~iv~~Ll~~gad--------~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 327 EVVMYLIQQGAS--------VEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp HHHHHHHHTTCC--------SSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCC--------ccCCCCCCCCHHHHHHHcCCHHHH
Confidence 999999999876 444677889999999999987654
No 15
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-38 Score=284.26 Aligned_cols=243 Identities=17% Similarity=0.142 Sum_probs=176.9
Q ss_pred CCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH 117 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~ 117 (294)
.+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 112 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 191 (437)
T 1n11_A 112 AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNN 191 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34455555555666666666665555555556667777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhh
Q 022605 118 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQ 191 (294)
Q Consensus 118 ~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~ 191 (294)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+.. +++++|+..+ .+
T Consensus 192 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~ 270 (437)
T 1n11_A 192 LDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ-AN 270 (437)
T ss_dssp HHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CC
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC-CC
Confidence 77777777777777777777777777777777777777777777766543 77777777554 3455666543 45
Q ss_pred hhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCC
Q 022605 192 VRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVS 271 (294)
Q Consensus 192 ~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~ 271 (294)
.+..+..|.||||+|+..|+.+++++|++.+......+..|.||||+|+..|+.++|++|...+.+ ....+.
T Consensus 271 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad--------~n~~~~ 342 (437)
T 1n11_A 271 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD--------VNAKTK 342 (437)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC--------TTCCCT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC--------CCCCCC
Confidence 556677788888888888888888888888877766777888999999999999999999888876 345677
Q ss_pred CCcccccccccccccccC
Q 022605 272 MPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 272 l~~t~l~~a~~n~~~~~~ 289 (294)
.|.||||+|+.+++..++
T Consensus 343 ~g~t~L~~A~~~g~~~iv 360 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIV 360 (437)
T ss_dssp TSCCHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHCChHHHH
Confidence 788999999998876543
No 16
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.3e-37 Score=254.12 Aligned_cols=208 Identities=17% Similarity=0.112 Sum_probs=185.6
Q ss_pred CCCccccCCCCCCCCCCCC-CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q 022605 50 SSLDPIRRSPVQDELTVPE-NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKK 128 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g 128 (294)
++.+.++.++..+...... +..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4566777888777766554 789999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCC
Q 022605 129 A-NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKG 201 (294)
Q Consensus 129 a-d~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t 201 (294)
+ +++..+..|.||||+|+..|+.+++++|+++|++++.. |+||||+|+.. +++++|+..+ .+++..+..|.|
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 160 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREET 160 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCC
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCcC
Confidence 7 89999999999999999999999999999999998644 99999999765 4567777653 677778889999
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
|||+|+..|+.+++++|++.++.....+..|.||+++|++.++.+++++|...+...
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 999999999999999999999887777788999999999999999999999887654
No 17
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-37 Score=276.59 Aligned_cols=220 Identities=19% Similarity=0.160 Sum_probs=199.5
Q ss_pred CCCCccccccCCCCCccccCCC--------CCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSP--------VQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTAL 109 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpL 109 (294)
.+.+.++.++..++.+.++.++ ..+...+..|..|.||||+|+..|+.++|++|+++|++++.+|..|.|||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 4667777788888888888776 56777788899999999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCC-----------CCCCCc
Q 022605 110 HIAACEGHVEVVKLLLSKK---ANIDARDRWGSTAAADAKYYG---NVEVYNILKARGAKVPK-----------TKRTPM 172 (294)
Q Consensus 110 h~A~~~g~~~~v~~Ll~~g---ad~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~ga~~~~-----------~~~t~l 172 (294)
|+|+..|+.+++++|+++| ++++..|..|.||||+|+..+ +.+++++|+++|++++. .|.|||
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~L 283 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTAL 283 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTH
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHH
Confidence 9999999999999999998 899999999999999999998 89999999999999875 599999
Q ss_pred cccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhh
Q 022605 173 TVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQ 249 (294)
Q Consensus 173 ~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~ 249 (294)
|+|+.. +++++|+..+..+++..+..|.||||+|+..|+.++|++|++.|++....+..|.||+++|+..|+.+|++
T Consensus 284 h~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 284 HYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp HHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999776 46677887666788888999999999999999999999999999888888889999999999999999999
Q ss_pred hhhhhcCC
Q 022605 250 FVGAVTQN 257 (294)
Q Consensus 250 ~L~~~~~~ 257 (294)
+|...+++
T Consensus 364 ~Ll~~~a~ 371 (373)
T 2fo1_E 364 IFDRCRPE 371 (373)
T ss_dssp HHHTTC--
T ss_pred HHHhcCcc
Confidence 99888765
No 18
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4e-36 Score=238.38 Aligned_cols=157 Identities=34% Similarity=0.404 Sum_probs=146.1
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 022605 74 MQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEV 153 (294)
Q Consensus 74 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~ 153 (294)
++|+.||..|+.++|++||++|+|+|.+|..|+||||+|+..++.+++++|+++|+|++.+|..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhh
Q 022605 154 YNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFT 233 (294)
Q Consensus 154 v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 233 (294)
+++|+++|+++|.. +..|.||||+|+..|+.++|++|++.+++....+..|+
T Consensus 86 v~~Ll~~gadvn~~----------------------------d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~ 137 (169)
T 4gpm_A 86 VKLLISKGADVNAK----------------------------DSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGR 137 (169)
T ss_dssp HHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHCcCCCCCC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 99999999987543 55788999999999999999999999988888888999
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
||+++|++.|+.+++++|...+++.
T Consensus 138 TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 138 TPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHTC----
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999999999999999999999874
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.9e-36 Score=251.54 Aligned_cols=206 Identities=20% Similarity=0.182 Sum_probs=118.8
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGS-DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+.+|||.|+..|+.+++++|++.+. .++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 3444555555555555555544432 234444445555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 151 VEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
.+++++|+++|++++.. |.||||+|+.. +++++|+..+ .+++..+..|.||||.|+..|+.+++++|++.+..
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS 164 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 55555555555444322 44555554332 2233333222 23344455677788888888888888888877776
Q ss_pred ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccc
Q 022605 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
....+..|.||+|+|+..++.+++++|...+.++ ...+..|.|||++|..+++.
T Consensus 165 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--------~~~~~~g~t~l~~A~~~~~~ 218 (231)
T 3aji_A 165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI--------YIENKEEKTPLQVAKGGLGL 218 (231)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS--------CCCCTTSCCHHHHSCHHHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHhhHHH
Confidence 6666667778888888888888888887777653 34566777888888766554
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.7e-36 Score=251.28 Aligned_cols=205 Identities=20% Similarity=0.114 Sum_probs=167.2
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCC-CCCCCCCcHHHHHHHcCcHHHHHHHHhCC--CCCCC-CCCCCCCHHHHHHH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVN-SIDLDGRTALHIAACEGHVEVVKLLLSKK--ANIDA-RDRWGSTAAADAKY 147 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~-~~~~~g~TpLh~A~~~g~~~~v~~Ll~~g--ad~~~-~~~~g~t~L~~A~~ 147 (294)
|.||||+|+..|+.++|++|++.|.++. .+|..|.||||+|+..|+.+++++|+++| ++++. .+..|+||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 6788888888888888888888887654 47888888888888888888888888888 55555 67888888888888
Q ss_pred cCCHHHHHHHHHCC--CCCCC---CCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhh
Q 022605 148 YGNVEVYNILKARG--AKVPK---TKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILD 219 (294)
Q Consensus 148 ~g~~~~v~~Ll~~g--a~~~~---~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll 219 (294)
.|+.+++++|+++| ++++. .|.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.+++++|+
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 88888888888888 66543 388888888654 4556666553 566777888999999999999999999999
Q ss_pred ccC-CCChHhhhhhhhHHHHHHHcCCCchhhhhh-hhcCCCCeEEEEecCCCCCCCcccccccccccc
Q 022605 220 KES-HKDPERINAFTHELTIVEKARHPNVVQFVG-AVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQ 285 (294)
Q Consensus 220 ~~~-~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~-~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~ 285 (294)
+.+ ......+..|.||+|+|+..++.+++++|. ..+.++ ...+..|.|||++|..++.
T Consensus 161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~--------~~~~~~g~t~l~~A~~~~~ 220 (228)
T 2dzn_A 161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY--------DLVDNKGAKAEDVALNEQV 220 (228)
T ss_dssp TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS--------CCBCTTSCBGGGGCSSTTH
T ss_pred hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC--------CccCCCCCcHHHHHHHHHH
Confidence 998 555566778999999999999999999999 778764 4467788999999987653
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.9e-37 Score=275.01 Aligned_cols=212 Identities=12% Similarity=0.018 Sum_probs=160.6
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
...|..|.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++++. ..|+||||+|
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A 91 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLA 91 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHH
Confidence 34566788888888888888888888888888888888888888888888888888888888885543 4678888888
Q ss_pred HHcCCHHHHHHHHHC----CCCCCC--------------------CCCCCccccCCCC-----CcccccCcchhhhhccc
Q 022605 146 KYYGNVEVYNILKAR----GAKVPK--------------------TKRTPMTVANPRE-----VPEYELNPLELQVRKAD 196 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~----ga~~~~--------------------~~~t~l~~a~~~~-----~~~~l~~~~~~~~~~~~ 196 (294)
+..|+.+++++|++. |++++. .|.||||+|+..+ ++++|+..+ .+++..+
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~~~~d 170 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASPTAKD 170 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCTTCCC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCCcccC
Confidence 888888888888887 666543 3788888885543 456666553 5666677
Q ss_pred CCCCCceeeeeecCchhhhHhhhccCCC-----ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCC
Q 022605 197 GITKGSYQVAKWNGTKVWVKILDKESHK-----DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVS 271 (294)
Q Consensus 197 ~~~~t~l~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~ 271 (294)
..|.||||+|+..|+.++|++|++.+.. ....+..|.||||+|+..|+.+++++|+..+.+. ...+.
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~--------~~~d~ 242 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV--------NMEDN 242 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT--------TCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCC
Confidence 7788888888888888888888877766 5555667788888888888888888888777653 34567
Q ss_pred CCccccccccccccccc
Q 022605 272 MPITPFLTLSFHKQTHT 288 (294)
Q Consensus 272 l~~t~l~~a~~n~~~~~ 288 (294)
.|.||||+|+.+++..+
T Consensus 243 ~g~tpL~~A~~~g~~~~ 259 (364)
T 3ljn_A 243 EHTVPLYLSVRAAMVLL 259 (364)
T ss_dssp TSCCHHHHHHHTCCHHH
T ss_pred CCCCHHHHHHHhChHHH
Confidence 77888888888877654
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1e-37 Score=260.61 Aligned_cols=222 Identities=18% Similarity=0.107 Sum_probs=194.5
Q ss_pred CCCCCCCCccccccCCCCCccccCCCC----CCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPV----QDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTAL 109 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpL 109 (294)
..+..+.+.++.++..++.+.++.++. .+......+..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 345677888888999999988888775 5667777889999999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhCCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----CCCCCccccCCC---
Q 022605 110 HIAACEGHVEVVKLLLSKKA----NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPK----TKRTPMTVANPR--- 178 (294)
Q Consensus 110 h~A~~~g~~~~v~~Ll~~ga----d~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~----~~~t~l~~a~~~--- 178 (294)
|+|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++.|++++. .|.||||+|+..
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 99999999999999999988 8999999999999999999999999999999999863 489999999665
Q ss_pred CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC
Q 022605 179 EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256 (294)
Q Consensus 179 ~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~ 256 (294)
+++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.|++....+..|.||+++|+..++.++++.|....+
T Consensus 164 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 164 SMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 5667777654 6777888899999999999999999999999998887788899999999999999999999976543
No 23
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-36 Score=256.04 Aligned_cols=223 Identities=22% Similarity=0.183 Sum_probs=198.3
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
+..+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 34456777888888999999999998888888899999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC---CCCCccccCCCC--
Q 022605 116 GHVEVVKLLLSKKANIDAR----------DRWGSTAAADAKYYGNVEVYNILKAR-GAKVPKT---KRTPMTVANPRE-- 179 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~----------~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~---~~t~l~~a~~~~-- 179 (294)
|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. |++++.. |.||||+|+..+
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc
Confidence 9999999999999999987 78899999999999999999999987 9998654 999999995443
Q ss_pred -----CcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhc-cCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh
Q 022605 180 -----VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDK-ESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253 (294)
Q Consensus 180 -----~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~ 253 (294)
++++|+..+ .+++..+..|.||||+|+..|+.+++++|++ .+......+..|.||+|+|++.++.+++++|..
T Consensus 196 ~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~ 274 (285)
T 1wdy_A 196 SDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274 (285)
T ss_dssp TTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHH
Confidence 345565543 5677778889999999999999999999998 666666677889999999999999999999999
Q ss_pred hcCCCC
Q 022605 254 VTQNIP 259 (294)
Q Consensus 254 ~~~~~~ 259 (294)
.++++.
T Consensus 275 ~Ga~~~ 280 (285)
T 1wdy_A 275 RGASTD 280 (285)
T ss_dssp HSSCSC
T ss_pred cCCCCC
Confidence 998863
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.6e-38 Score=277.27 Aligned_cols=250 Identities=15% Similarity=0.053 Sum_probs=212.2
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~ 114 (294)
.+..+.+.++.++..++.+.++.++..+......+..|.||||+||..|+.++|++|+++|++++. .+|.||||+|+.
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~ 93 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVM 93 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHH
Confidence 345567788888999999999999999888888999999999999999999999999999997664 579999999999
Q ss_pred cCcHHHHHHHHhC----CCCCCC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHHCCCCCCCC---C
Q 022605 115 EGHVEVVKLLLSK----KANIDA-----------------RDRWGSTAAADAKYYG--NVEVYNILKARGAKVPKT---K 168 (294)
Q Consensus 115 ~g~~~~v~~Ll~~----gad~~~-----------------~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~~---~ 168 (294)
.|+.++|++|+++ |++++. .|..|.||||+|+..| +.+++++|+++|++++.. |
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g 173 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKAD 173 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCC
Confidence 9999999999999 888877 8889999999999999 999999999999998654 9
Q ss_pred CCCccccCCC---CCcccccCcc----hhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHH
Q 022605 169 RTPMTVANPR---EVPEYELNPL----ELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241 (294)
Q Consensus 169 ~t~l~~a~~~---~~~~~l~~~~----~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~ 241 (294)
+||||+|+.. +++++|+..+ ..+++..+..|.||||+|+..|+.++|++|++.|++....+..|.|||++|+.
T Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 253 (364)
T 3ljn_A 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR 253 (364)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 9999999765 5567777644 12377788899999999999999999999999998888888899999999999
Q ss_pred cCCCchhhhhhhhcCCCCeEE----EEecCCCCCCCccccccccccccc
Q 022605 242 ARHPNVVQFVGAVTQNIPMMI----VLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~----~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
.|+.+++++|+..+++....- -.........+.|||++|+.+++.
T Consensus 254 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~ 302 (364)
T 3ljn_A 254 AAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK 302 (364)
T ss_dssp TCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHH
T ss_pred hChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCH
Confidence 999999999998865421000 001112455678999999988754
No 25
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=246.67 Aligned_cols=224 Identities=16% Similarity=0.121 Sum_probs=197.1
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIA 112 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A 112 (294)
.+++.....++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 455667778888999999999999999888888889999999999999999999999999999988655 5599999999
Q ss_pred HHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCC----CCCccccc
Q 022605 113 ACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANP----REVPEYEL 185 (294)
Q Consensus 113 ~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~----~~~~~~l~ 185 (294)
+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+. .+++++++
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998654 9999999963 34556665
Q ss_pred CcchhhhhcccC-CCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 186 NPLELQVRKADG-ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 186 ~~~~~~~~~~~~-~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
..+ .+++..+. .|.||||+|+..|+.+++++|++.+.+....+..|.||+++|++.++.+++++|...++..
T Consensus 164 ~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 164 TFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred hcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 544 55666665 7889999999999999999999999888777888999999999999999999999887754
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.9e-36 Score=247.79 Aligned_cols=187 Identities=22% Similarity=0.212 Sum_probs=167.8
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC-----CCCCCCCCCHHHH
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANI-----DARDRWGSTAAAD 144 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-----~~~~~~g~t~L~~ 144 (294)
.|.||||+|+..|+.++|++|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|+||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 488999999999999999999998 9999999999999999999999999999999999987 6778899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCC----------------CCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceee
Q 022605 145 AKYYGNVEVYNILKARGAKVPK----------------TKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQV 205 (294)
Q Consensus 145 A~~~g~~~~v~~Ll~~ga~~~~----------------~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~ 205 (294)
|+..|+.+++++|+++|++++. .|+||||+|+.. +++++|+..+ .+++..+..|.||||+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHH
Confidence 9999999999999999999865 489999999654 5677787654 6778888999999999
Q ss_pred eeecCchhhh----HhhhccCCCC------hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 206 AKWNGTKVWV----KILDKESHKD------PERINAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 206 A~~~g~~~~v----~~Ll~~~~~~------~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
|+..|+.+++ ++|++.++.. ...+..|.||+++|++.|+.+++++|...+...
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 9999999988 9999888766 356678999999999999999999999887653
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=265.38 Aligned_cols=209 Identities=18% Similarity=0.142 Sum_probs=152.7
Q ss_pred CCccccccCCCCCccccCCCCCCCC--------CCCCCCCchhHHHHHHHcCCHH-HHHHHHhcCCCCCCCCCCCCcHHH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDEL--------TVPENLDSTMQLLFMACRGDVK-GVEDLLNEGSDVNSIDLDGRTALH 110 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~t~L~~Aa~~g~~~-~v~~Ll~~g~~~~~~~~~g~TpLh 110 (294)
.+.++.++..|+.+.++.+++.+.. ....+..+.||||+|+..+..+ ++++|++.|+++|.+|.+|+||||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 3467788888888888887766543 2345667889999999877664 788899999999999999999999
Q ss_pred HHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccc
Q 022605 111 IAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYE 184 (294)
Q Consensus 111 ~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l 184 (294)
+||..|+.++|++|++.|++++..+..|.||+|+|+..++.+++++|++.|++++.. |+||||+|+.. +++++|
T Consensus 92 ~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~L 171 (269)
T 4b93_B 92 VAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALL 171 (269)
T ss_dssp HHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHH
T ss_pred HHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988654 89999999654 566777
Q ss_pred cCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhh
Q 022605 185 LNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFV 251 (294)
Q Consensus 185 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L 251 (294)
+..+ .+++..+..|.||||+|+..|+.++|++|++.|++....+..|+||+|+|+++++ |+++|
T Consensus 172 l~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 172 LQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp HHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred HHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 7654 6777788899999999999999999999999998888888899999999987664 55554
No 28
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.7e-36 Score=249.64 Aligned_cols=218 Identities=17% Similarity=0.153 Sum_probs=196.7
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAA 113 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~ 113 (294)
..+..+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAA 85 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHH
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Confidence 34556778888888899999999999988888888999999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccC
Q 022605 114 CEGHVEVVKLLLSKK-ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELN 186 (294)
Q Consensus 114 ~~g~~~~v~~Ll~~g-ad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~ 186 (294)
..|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.. |.||||+|+.. +++++|+.
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999998 899999999999999999999999999999999998654 99999999654 56777777
Q ss_pred cchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhh
Q 022605 187 PLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVG 252 (294)
Q Consensus 187 ~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~ 252 (294)
.+ .+++..+..|.||||+|+..|+.+++++|++.+++....+..|.||+++|+..++.+.+..+.
T Consensus 166 ~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 166 AK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp TT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred cC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 65 667777888999999999999999999999999888888889999999999999876555543
No 29
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.3e-36 Score=265.40 Aligned_cols=237 Identities=19% Similarity=0.116 Sum_probs=199.6
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCC-CchhHHHHHHHcCCHHHHHHHHhcCCCCC------------------
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENL-DSTMQLLFMACRGDVKGVEDLLNEGSDVN------------------ 99 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~------------------ 99 (294)
..+.++.++..++++.++.+++.+...+..+. .|.||||+||..|+.++|++||++|++++
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 45678889999999999999998887776654 59999999999999999999999987654
Q ss_pred ---------------CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHHHH
Q 022605 100 ---------------SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDAR----------DRWGSTAAADAKYYGNVEVY 154 (294)
Q Consensus 100 ---------------~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~----------~~~g~t~L~~A~~~g~~~~v 154 (294)
.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.++|
T Consensus 105 ~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 105 VKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred chhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 45678899999999999999999999999998754 45689999999999999999
Q ss_pred HHHHH-CCCCCCCC---CCCCccccC---CC----CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc-C
Q 022605 155 NILKA-RGAKVPKT---KRTPMTVAN---PR----EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE-S 222 (294)
Q Consensus 155 ~~Ll~-~ga~~~~~---~~t~l~~a~---~~----~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-~ 222 (294)
++|++ .|++++.. |.|+++.++ .. .++++|+..+ .+++..+..|.||||+|+..|+.++|++|+.. +
T Consensus 185 ~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~ 263 (337)
T 4g8k_A 185 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 263 (337)
T ss_dssp HHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT
T ss_pred HHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC
Confidence 99995 69998654 889998752 22 2455666544 66777888899999999999999999999975 4
Q ss_pred CCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 223 HKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 223 ~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
......+..|+||||+|++.|+.++|++|+..+++++ ..+|||+|+.+++..++
T Consensus 264 ~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-------------~~~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 264 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD-------------CGDLVMTARRNYDHSLV 317 (337)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-------------TCCHHHHHHHTTCHHHH
T ss_pred CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------------CCCHHHHHHHcCCHHHH
Confidence 5555667789999999999999999999999988752 23699999999987654
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.6e-36 Score=257.66 Aligned_cols=209 Identities=18% Similarity=0.100 Sum_probs=175.9
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCC---CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDEL---TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALH 110 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh 110 (294)
..+..+.++++.++..++.+.++.++..+.. ....+..|.||||+||..|+.++|++|+++|++++.+|..|.||||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH 83 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3566788888999999999999988876655 5677889999999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHhCCCC-----------------------------------------------CCCCCCCCCCHHH
Q 022605 111 IAACEGHVEVVKLLLSKKAN-----------------------------------------------IDARDRWGSTAAA 143 (294)
Q Consensus 111 ~A~~~g~~~~v~~Ll~~gad-----------------------------------------------~~~~~~~g~t~L~ 143 (294)
+|+..|+.+++++|+++|++ ++..+..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 99999999999999998865 6778899999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCC----CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhH
Q 022605 144 DAKYYGNVEVYNILKARGAKVPKT----KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVK 216 (294)
Q Consensus 144 ~A~~~g~~~~v~~Ll~~ga~~~~~----~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~ 216 (294)
+|+..|+.+++++|+++|++++.. |+||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.++++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 999999999999999999998653 89999999765 5677777664 677888899999999999999999999
Q ss_pred hhhccCCCChHhhhhhhhHHHHHHHcC
Q 022605 217 ILDKESHKDPERINAFTHELTIVEKAR 243 (294)
Q Consensus 217 ~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 243 (294)
+|++.|+.....+..|.||+++|....
T Consensus 243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 243 LLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCCCCCCC--------------
T ss_pred HHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999999888999999999987764
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=9.8e-37 Score=262.03 Aligned_cols=203 Identities=17% Similarity=0.126 Sum_probs=170.1
Q ss_pred CCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q 022605 50 SSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKA 129 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga 129 (294)
.+...+..++... .....|..|.||||+|+..|+.++|++|+++|++++.+ +|+||||+|+..|+.+++++|+++|+
T Consensus 10 ~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 10 WKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp CCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred cCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3344444444443 35667888999999999999999999999999999887 48999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---C-CCCccccCCC---CCcccccCcchhhhhccc-CCCCC
Q 022605 130 NIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---K-RTPMTVANPR---EVPEYELNPLELQVRKAD-GITKG 201 (294)
Q Consensus 130 d~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~-~t~l~~a~~~---~~~~~l~~~~~~~~~~~~-~~~~t 201 (294)
+++..|..|+||||+|+..|+.+++++|+++|++++.. | .||||+|+.. +++++|+..+... .+ ..|.|
T Consensus 87 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t 163 (285)
T 3kea_A 87 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLS 163 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHH
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCcc
Confidence 99999999999999999999999999999999998644 6 7999999665 4567777665222 22 26789
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhhhhhhhH-HHHHHHcCCCchhhhhhhhcCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERINAFTHE-LTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~-l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
|||+|+..|+.+++++|++.|++....+..|.|| +|+|+..++.+++++|...+.++
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~ 221 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999998888777777788887 99999999999999999888775
No 32
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=258.67 Aligned_cols=215 Identities=17% Similarity=0.106 Sum_probs=192.4
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~ 114 (294)
.+..+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+.
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 44556778888888999999999999888888889999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcc
Q 022605 115 EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPL 188 (294)
Q Consensus 115 ~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~ 188 (294)
.|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++.. |+||||+|+.. +++++|+..+
T Consensus 135 ~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 213 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213 (285)
T ss_dssp HTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC
Confidence 999999999999999998654 5999999999999999999999999998654 99999999765 5667777654
Q ss_pred hhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh
Q 022605 189 ELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254 (294)
Q Consensus 189 ~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~ 254 (294)
.+++ .+..|.||||+|+..|+.+++++|++.+++....+..|.||+++|+ ++.+++++|...
T Consensus 214 -a~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 214 -ADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp -CCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred -CCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 3444 3677899999999999999999999999888888889999999998 568999999887
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.3e-35 Score=244.49 Aligned_cols=219 Identities=16% Similarity=0.060 Sum_probs=176.0
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCC----CCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDE----LTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALH 110 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh 110 (294)
.+..+.+.++.++..++.+.++.++.... .....+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 45667778888888888888888877654 45667788999999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccc
Q 022605 111 IAACEGHVEVVKLLLSKKAN------IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYE 184 (294)
Q Consensus 111 ~A~~~g~~~~v~~Ll~~gad------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l 184 (294)
+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------- 146 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ----------------- 146 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----------------
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-----------------
Confidence 99999999999999998876 4667788999999999999999999999988877543
Q ss_pred cCcchhhhhcccC-CCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEE
Q 022605 185 LNPLELQVRKADG-ITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIV 263 (294)
Q Consensus 185 ~~~~~~~~~~~~~-~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~ 263 (294)
+. .|.||||+|+..|+.++|++|++.|++....+..|.||+++|+..++.+++++|...++++.
T Consensus 147 -----------~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~---- 211 (236)
T 1ikn_D 147 -----------EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL---- 211 (236)
T ss_dssp -----------CTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG----
T ss_pred -----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh----
Confidence 33 67899999999999999999999988887788889999999999999999999999988641
Q ss_pred EecCCCCCCCcccccccccccccc
Q 022605 264 LEYHAKVSMPITPFLTLSFHKQTH 287 (294)
Q Consensus 264 ~e~~~~g~l~~t~l~~a~~n~~~~ 287 (294)
.......+.||+..++......
T Consensus 212 --~~~~~~~~~~~~~~~~~~~~~~ 233 (236)
T 1ikn_D 212 --QMLPESEDEESYDTESEFTEFT 233 (236)
T ss_dssp --SSCCCCCTTTCCCCC-------
T ss_pred --hcCCccchHHHHhhhccccccc
Confidence 1235666788888887665443
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.4e-35 Score=236.87 Aligned_cols=186 Identities=16% Similarity=0.185 Sum_probs=164.0
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNEGS-DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~ 148 (294)
..+.||||.||..|+.++|+.|++.+. +++.+|..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 457889999999999999999998875 8999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-HCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCc-----hhhhH
Q 022605 149 GNVEVYNILK-ARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGT-----KVWVK 216 (294)
Q Consensus 149 g~~~~v~~Ll-~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~-----~~~v~ 216 (294)
|+.+++++|+ ..+++++.. |.||||+|+.. +++++|+..+..+++..+..|.||||+|+..++ .++++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999999999 556676543 88999999665 566777777667788888899999999999988 99999
Q ss_pred hhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc
Q 022605 217 ILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255 (294)
Q Consensus 217 ~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~ 255 (294)
+|++.|.+....+..|.||+++|++.|+.+++++|...+
T Consensus 163 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 163 LLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999888888889999999999999999999997643
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=243.93 Aligned_cols=214 Identities=18% Similarity=0.081 Sum_probs=187.7
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCCHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADA 145 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A 145 (294)
..+..|.||||.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 457789999999999999999999999999999999999999999999999999999999999998665 4599999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCc-hhhhHhh
Q 022605 146 KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGT-KVWVKIL 218 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~-~~~v~~L 218 (294)
+..|+.+++++|++.|++++.. |.||||+|+.. +++++|+..+ .+++..+..|.||||.|+..++ .+++++|
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 9999999999999999998644 89999999765 4566676544 5677778889999999997776 8999999
Q ss_pred hccCCCChHhhh-hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 219 DKESHKDPERIN-AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 219 l~~~~~~~~~~~-~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
++.+........ .|.||+|+|+..++.+++++|...+.++ ...+..|.|||++|+.+++..++
T Consensus 163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~l~~A~~~~~~~~v 226 (240)
T 3eu9_A 163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV--------DAQNIKGESALDLAKQRKNVWMI 226 (240)
T ss_dssp HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT--------TCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC--------CCcCCCCCCHHHHHHHcCcHHHH
Confidence 988877766665 7889999999999999999999998764 44567789999999999987653
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-35 Score=246.40 Aligned_cols=211 Identities=18% Similarity=0.073 Sum_probs=186.0
Q ss_pred CCccccccCCCCCccccCCCCCCCCCCC-CCCCchhHHHHHHHcCCHHHHHHHHhcC--CCCCC-CCCCCCcHHHHHHHc
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDELTVP-ENLDSTMQLLFMACRGDVKGVEDLLNEG--SDVNS-IDLDGRTALHIAACE 115 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~-~~~~g~TpLh~A~~~ 115 (294)
.++++.++..++.+.++.++..+..... .+..|.||||+|+..|+.+++++|+++| .+++. ++..|.||||+|+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 4556777788888888888877766544 7889999999999999999999999999 55555 788999999999999
Q ss_pred CcHHHHHHHHhCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCc
Q 022605 116 GHVEVVKLLLSKK--ANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNP 187 (294)
Q Consensus 116 g~~~~v~~Ll~~g--ad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~ 187 (294)
|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.. |+||||+|+.. +++++|+..
T Consensus 83 ~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 162 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162 (228)
T ss_dssp CCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999998 999999999999999999999999999999999998654 99999999754 567888887
Q ss_pred chhhhhcccCCCCCceeeeeecCchhhhHhhh-ccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh
Q 022605 188 LELQVRKADGITKGSYQVAKWNGTKVWVKILD-KESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253 (294)
Q Consensus 188 ~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~ 253 (294)
+..+++..+..|.||||+|+..|+.+++++|+ +.|++....+..|.||+++|.. .+++++|..
T Consensus 163 g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~---~~~~~~l~~ 226 (228)
T 2dzn_A 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLN 226 (228)
T ss_dssp TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS---TTHHHHHHT
T ss_pred CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH---HHHHHHHHh
Confidence 76788888999999999999999999999999 7888887888899999999964 477777754
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.9e-35 Score=258.55 Aligned_cols=236 Identities=21% Similarity=0.120 Sum_probs=191.9
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAA 113 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~ 113 (294)
..+..+.++++.++..++.+.++.++..+......+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAA 132 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34456677888888899999999999998888889999999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCCCCCCCCC------------------------------------------------------CCCC
Q 022605 114 CEGHVEVVKLLLSKKANIDARD------------------------------------------------------RWGS 139 (294)
Q Consensus 114 ~~g~~~~v~~Ll~~gad~~~~~------------------------------------------------------~~g~ 139 (294)
..|+.+++++|+++|++++..+ ..|.
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (351)
T 3utm_A 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE 212 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCC
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCC
Confidence 9999999999999999988654 4567
Q ss_pred CHHHHHHHc---CCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecC
Q 022605 140 TAAADAKYY---GNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNG 210 (294)
Q Consensus 140 t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g 210 (294)
||||+|+.. +..+++++|++.|++++.. |+||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|
T Consensus 213 t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 213 TALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 999999999 5589999999999998644 99999999765 5667777654 677788889999999999999
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccc
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQ 285 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~ 285 (294)
+.++|++|++.|++....+..|.||+++| +.+++++|...... ....+.++|..|+.+|+
T Consensus 292 ~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~-----------~~~~~~~~l~~A~~~gd 351 (351)
T 3utm_A 292 HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM-----------RTSDVDYRLLEASKAGD 351 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-------------------------------
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc-----------ccCcceeehhhhhccCC
Confidence 99999999999998888888999999987 56888888765543 34455688888888764
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.1e-35 Score=244.60 Aligned_cols=192 Identities=14% Similarity=0.080 Sum_probs=167.1
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGS----DVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAA 142 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~----~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L 142 (294)
..|.+|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.++|++|+++|++++..|..|+|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 457789999999999999999999998764 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 143 ADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 143 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
|+|+..|+.+++++|++.|++++.. ..+...+..|.||||+|+..|+.+++++|++.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~----------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 140 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLH----------------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLG 140 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSS----------------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHH----------------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999998874321 123555677899999999999999999999999
Q ss_pred CCChHhhh-hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccccc
Q 022605 223 HKDPERIN-AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 223 ~~~~~~~~-~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
......+. .|.||||+|+..++.+++++|...+.+. ...+..|.|||++|+.+++..+
T Consensus 141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--------~~~~~~g~tpl~~A~~~~~~~~ 199 (236)
T 1ikn_D 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV--------NRVTYQGYSPYQLTWGRPSTRI 199 (236)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS--------CCCCTTCCCGGGGCTTSSCHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------CcccCCCCCHHHHHHccCchHH
Confidence 87777766 8999999999999999999999998764 4467788999999999988654
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.8e-34 Score=226.39 Aligned_cols=156 Identities=32% Similarity=0.385 Sum_probs=144.7
Q ss_pred ccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 022605 42 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVV 121 (294)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v 121 (294)
.++.++..|+.+.++.+++.+...+..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCC
Q 022605 122 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKG 201 (294)
Q Consensus 122 ~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t 201 (294)
++|+++|+|+|.+|..|+||||+|+..|+.++|++|+++|++++.. +..|.|
T Consensus 87 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~----------------------------d~~G~T 138 (169)
T 4gpm_A 87 KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS----------------------------DSDGRT 138 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTTSCC
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----------------------------CCCCCC
Confidence 9999999999999999999999999999999999999999987543 567889
Q ss_pred ceeeeeecCchhhhHhhhccCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
|||+|+..|+.+++++|++.|+..
T Consensus 139 pL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 139 PLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999999999999999988754
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.1e-35 Score=247.55 Aligned_cols=186 Identities=15% Similarity=0.092 Sum_probs=144.5
Q ss_pred chhHHHHHHHcCCHH----HHHHHHhcCCCCCC----CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCC------
Q 022605 72 STMQLLFMACRGDVK----GVEDLLNEGSDVNS----IDLDGRTALHIAACE---GHVEVVKLLLSKKANIDAR------ 134 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~----~v~~Ll~~g~~~~~----~~~~g~TpLh~A~~~---g~~~~v~~Ll~~gad~~~~------ 134 (294)
|.||||+||..|+.+ ++++|+++|++++. +|..|+||||+|+.. |+.++|++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 678888888888886 45666667888877 777888888888887 8888888888877776533
Q ss_pred -----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----------------CCCCccccCCC---CCcccccCc--c
Q 022605 135 -----DRWGSTAAADAKYYGNVEVYNILKARGAKVPKT----------------KRTPMTVANPR---EVPEYELNP--L 188 (294)
Q Consensus 135 -----~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----------------~~t~l~~a~~~---~~~~~l~~~--~ 188 (294)
|..|+||||+|+..|+.+++++|+++|++++.. |.||||+|+.. +++++|+.. .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 366888888888888888888888888777533 77888887554 456666663 3
Q ss_pred hhhhhcccCCCCCceeeeee--cCchh-------hhHhhhccCCCC-------hHhhhhhhhHHHHHHHcCCCchhhhhh
Q 022605 189 ELQVRKADGITKGSYQVAKW--NGTKV-------WVKILDKESHKD-------PERINAFTHELTIVEKARHPNVVQFVG 252 (294)
Q Consensus 189 ~~~~~~~~~~~~t~l~~A~~--~g~~~-------~v~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~iv~~L~ 252 (294)
+.+++..+..|.||||+|+. .++.+ ++++|++.|+.. ...+..|.||+|+|++.|+.+++++|.
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 36667778889999999998 77888 999999888766 556678999999999999999999998
Q ss_pred hhcCC
Q 022605 253 AVTQN 257 (294)
Q Consensus 253 ~~~~~ 257 (294)
..+..
T Consensus 242 ~~g~~ 246 (256)
T 2etb_A 242 QREFS 246 (256)
T ss_dssp HHHHH
T ss_pred hCCCC
Confidence 87654
No 41
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.7e-33 Score=225.57 Aligned_cols=162 Identities=20% Similarity=0.165 Sum_probs=151.5
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
+..+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 45688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCC
Q 022605 146 KYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+...
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDR----------------------------NLEGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCC----------------------------CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHCCCCCCCC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999999999999886543 456889999999999999999999998887
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhhhhc
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVGAVT 255 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~ 255 (294)
...+..|.||+++|+..++.+++++|...+
T Consensus 161 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 161 SARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 777889999999999999999999998764
No 42
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.1e-33 Score=234.95 Aligned_cols=219 Identities=22% Similarity=0.167 Sum_probs=195.8
Q ss_pred CCCCccccccCCCCCccccCCCCCCCC-CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcC
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEG 116 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g 116 (294)
.....++.++..++.+.+++++..... ....+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC
Confidence 345667888889999999888776544 4567889999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchh
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLEL 190 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~ 190 (294)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.. |.||||+|+.. +++++|+..+ .
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~ 163 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK-A 163 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-C
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-C
Confidence 999999999999999999999999999999999999999999999998654 99999999654 5667777644 5
Q ss_pred hhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 191 QVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 191 ~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
+++..+..|.||||+|+..|+.+++++|++.|++....+..|.||+++|+..++.+++++|...+++
T Consensus 164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 6677788899999999999999999999999988877788999999999999999999999877653
No 43
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.9e-32 Score=217.09 Aligned_cols=159 Identities=27% Similarity=0.336 Sum_probs=146.4
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKY 147 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~ 147 (294)
....+.++|++||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChH
Q 022605 148 YGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPE 227 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~ 227 (294)
.|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+.+...
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNAN----------------------------DMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCCC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999886432 45678999999999999999999999888777
Q ss_pred hhhhhhhHHHHHHHcCCCchhhhhhhh
Q 022605 228 RINAFTHELTIVEKARHPNVVQFVGAV 254 (294)
Q Consensus 228 ~~~~~~t~l~~a~~~~~~~iv~~L~~~ 254 (294)
.+..|.||+++|+..++.+++++|...
T Consensus 142 ~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 142 QDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 778899999999999999999999764
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.8e-34 Score=237.16 Aligned_cols=198 Identities=19% Similarity=0.158 Sum_probs=173.1
Q ss_pred cCCHHHHHHHHhcCCCCCCC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Q 022605 82 RGDVKGVEDLLNEGSDVNSI-DLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR 160 (294)
Q Consensus 82 ~g~~~~v~~Ll~~g~~~~~~-~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 160 (294)
.|+.+++++|+++|++++.. |..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 37788999999999998765 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCC---CCCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhh
Q 022605 161 GA-KVP---KTKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFT 233 (294)
Q Consensus 161 ga-~~~---~~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 233 (294)
++ +++ ..|.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.+......+..|.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 87 554 3499999999664 4566777643 56777788899999999999999999999999888777778899
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccccc
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
||+|+|+..++.+++++|...+.++ ...+..|.|||++|+.+++..+
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~ga~~--------~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHFANR--------DITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC--------ccccccCCCHHHHHHHhcchHH
Confidence 9999999999999999999998864 4467778999999999988654
No 45
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=9.5e-34 Score=248.68 Aligned_cols=217 Identities=21% Similarity=0.181 Sum_probs=184.0
Q ss_pred CCCccccccCCCCCccccCCCCCCC---------------------------------CCCCCCCCchhHHHHHHHcCCH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDE---------------------------------LTVPENLDSTMQLLFMACRGDV 85 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~g~t~L~~Aa~~g~~ 85 (294)
+.++++.++..++.+.++.++..+. .....+..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 4566777777777777766655443 3345677899999999999999
Q ss_pred HHHHHHHhcCCCCCCC----------CCCCCcHHHHHHHcCcHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCC----
Q 022605 86 KGVEDLLNEGSDVNSI----------DLDGRTALHIAACEGHVEVVKLLLS-KKANIDARDRWGSTAAADAKYYGN---- 150 (294)
Q Consensus 86 ~~v~~Ll~~g~~~~~~----------~~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~---- 150 (294)
+++++|+++|++++.. +..|.||||+|+..|+.++|++|++ .|++++..|..|.||+|+++..+.
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~ 218 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 218 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTH
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccH
Confidence 9999999999998754 3468999999999999999999996 599999999999999999887654
Q ss_pred HHHHHHHHHCCCCCCCC---CCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 151 VEVYNILKARGAKVPKT---KRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
..++++|+++|++++.. |+||||+|+.. +.+++|+.....+++..+..|.||||+|+..|+.++|++|++.|++
T Consensus 219 ~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 219 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 46889999999999765 99999999765 4566777766788889999999999999999999999999999876
Q ss_pred ChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCe
Q 022605 225 DPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM 260 (294)
Q Consensus 225 ~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l 260 (294)
.. ..+|+++|++.++.+||++|+..++++++
T Consensus 299 ~n-----~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 299 TD-----CGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp ST-----TCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred CC-----CCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 53 35799999999999999999999998743
No 46
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.98 E-value=4.9e-33 Score=231.45 Aligned_cols=188 Identities=18% Similarity=0.121 Sum_probs=147.8
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
...+.++.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++..|..|+||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeee--eecCchhhhHhhhccCC
Q 022605 146 KYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVA--KWNGTKVWVKILDKESH 223 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A--~~~g~~~~v~~Ll~~~~ 223 (294)
+..|+.+++++|+++|++++.. .+..|.||||+| +..|+.+++++|++.++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~---------------------------~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFAT---------------------------TLSDGATAFEKCDPYREGYADCATYLADVEQ 147 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCC---------------------------CSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcccc---------------------------cCCCCCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence 9999999999999999987543 023456677777 77777777777777766
Q ss_pred CChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 224 KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 224 ~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
+....+..+.++++.++.. ...++|...+.+. +...++..|.||||+|+.+|+..++
T Consensus 148 ~~~~~~~~~~~~l~~~~~~---~~~~~ll~~ga~~------~~~~~d~~G~TpL~~A~~~g~~~~v 204 (229)
T 2vge_A 148 SMGLMNSGAVYALWDYSAE---FGDELSFREGESV------TVLRRDGPEETDWWWAALHGQEGYV 204 (229)
T ss_dssp HTTTSGGGEEEESSCBCCS---STTBCCBCTTCEE------EEEESSCTTCSSEEEEEETTEEEEE
T ss_pred CcccccCCchHHHHHHhhc---cccccCccccccc------cccccCCCcccHHHHHHHcCCccee
Confidence 5555555566666643332 2334554444431 2334566677777777777776654
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=6.5e-35 Score=250.66 Aligned_cols=215 Identities=14% Similarity=0.034 Sum_probs=189.6
Q ss_pred CCCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHH
Q 022605 33 SSFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIA 112 (294)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A 112 (294)
...+..+.++++.++..++.+.++.++..+...... +|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 455667788888899999999999998887766555 489999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHHCCCCCC-C-CCCCCccccCCC---CCcccccC
Q 022605 113 ACEGHVEVVKLLLSKKANIDARDRWG-STAAADAKYYGNVEVYNILKARGAKVP-K-TKRTPMTVANPR---EVPEYELN 186 (294)
Q Consensus 113 ~~~g~~~~v~~Ll~~gad~~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~-~~~t~l~~a~~~---~~~~~l~~ 186 (294)
+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|+++. . .|.||||+|+.. +++++|+.
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 182 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLD 182 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999999999999 799999999999999999999999873 3 589999999765 56777776
Q ss_pred cchhhhhcccCCCCCc-eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 187 PLELQVRKADGITKGS-YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 187 ~~~~~~~~~~~~~~t~-l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
.+ .+++..+..|.|| ||+|+..|+.+++++|++.|++....+. .++..++.+++++|...+.+
T Consensus 183 ~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 183 YM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp HH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHH
T ss_pred cC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCC
Confidence 54 7788888899997 9999999999999999999876655442 45678999999999988765
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=1.4e-32 Score=217.18 Aligned_cols=158 Identities=18% Similarity=0.168 Sum_probs=147.9
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhh
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERIN 230 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (294)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+.+....+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEY----------------------------DWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHHHHHHHHTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHCCCCCCcC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999886433 45688999999999999999999999888777788
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQ 256 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~ 256 (294)
.|.||+++|+..|+.+++++|.....
T Consensus 134 ~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 134 SGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 89999999999999999999987654
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=1.2e-32 Score=216.16 Aligned_cols=158 Identities=25% Similarity=0.247 Sum_probs=144.7
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
...||||.|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++..+..|+||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46799999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCC-hHhh
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKD-PERI 229 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~-~~~~ 229 (294)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+..+ ...+
T Consensus 83 ~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 134 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIE----------------------------DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 134 (162)
T ss_dssp HHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHHHHHHHHcCCCCCCc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC
Confidence 99999999999886543 456889999999999999999999998875 5566
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
..|.||+++|+..++.+++++|...+++
T Consensus 135 ~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 135 HKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 7889999999999999999999988763
No 50
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=3.9e-35 Score=252.90 Aligned_cols=207 Identities=18% Similarity=0.159 Sum_probs=183.9
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~ 114 (294)
.+....+.++.++..++.+.++.++..+......+..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 33445566788888999999999999888888889999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCC-----------------------------
Q 022605 115 EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR-GAKV----------------------------- 164 (294)
Q Consensus 115 ~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~----------------------------- 164 (294)
.|+.++|++|+++|++++..+..|.||||+|+..++.+++++++.. |+++
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 9999999999999999999999999999999999999999888753 5443
Q ss_pred CCCCCCCccccCCC---CCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHH
Q 022605 165 PKTKRTPMTVANPR---EVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK 241 (294)
Q Consensus 165 ~~~~~t~l~~a~~~---~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~ 241 (294)
+..|.||||+|+.. +++++|+..+ .+++..+..|.||||+|+..|+.+++++|++.|++....+..|.||+++|++
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 23599999999764 5677888755 6777888899999999999999999999999998888888899999999965
Q ss_pred c
Q 022605 242 A 242 (294)
Q Consensus 242 ~ 242 (294)
.
T Consensus 275 ~ 275 (299)
T 1s70_B 275 D 275 (299)
T ss_dssp G
T ss_pred H
Confidence 3
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.7e-32 Score=217.77 Aligned_cols=158 Identities=18% Similarity=0.158 Sum_probs=145.3
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSD-VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+.||||.||..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 56899999999999999999999976 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhh
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERIN 230 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (294)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+.+....+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 82 TDIVGLLLERDVDINIY----------------------------DWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHHHHHHHTTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 99999999998876442 45678999999999999999999999888777778
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
.|.||+++|+..++.+++++|...+.+
T Consensus 134 ~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 134 SGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 899999999999999999999888764
No 52
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.9e-33 Score=232.61 Aligned_cols=187 Identities=17% Similarity=0.175 Sum_probs=162.6
Q ss_pred CCCccccccCCCCCccccCCCCC-CCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCC-----CCCCCCCCcHHHHH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDV-----NSIDLDGRTALHIA 112 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-----~~~~~~g~TpLh~A 112 (294)
+.+.++.++..++.+.++.++.. +......+..|.||||+|+..|+.++|++|+++|+++ +.+|..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 35667788888999999998887 7777888999999999999999999999999999886 67788999999999
Q ss_pred HHcCcHHHHHHHHhCCCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCccccC
Q 022605 113 ACEGHVEVVKLLLSKKANIDARDR-------------WGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMTVAN 176 (294)
Q Consensus 113 ~~~g~~~~v~~Ll~~gad~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~ 176 (294)
+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.. |+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999998865 7999999999999999999999999998644 999999998
Q ss_pred CCCCc-------ccccCcchhh-----hhcccCCCCCceeeeeecCchhhhHhhhccCCCC
Q 022605 177 PREVP-------EYELNPLELQ-----VRKADGITKGSYQVAKWNGTKVWVKILDKESHKD 225 (294)
Q Consensus 177 ~~~~~-------~~l~~~~~~~-----~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~ 225 (294)
..+.. ++|+..+... .+..+..|.||||+|+..|+.+++++|++++...
T Consensus 163 ~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 163 LQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp TCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 76443 5666554211 1467788999999999999999999999887544
No 53
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=7.1e-34 Score=248.85 Aligned_cols=184 Identities=11% Similarity=-0.004 Sum_probs=155.9
Q ss_pred cccCCCCCCCCCCC-CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc---HHHHHHHHhCC-
Q 022605 54 PIRRSPVQDELTVP-ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH---VEVVKLLLSKK- 128 (294)
Q Consensus 54 ~~~~~~~~~~~~~~-~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~---~~~v~~Ll~~g- 128 (294)
.++.++..+...+. .+..|.||||+||..|+.++|++||++|++++.+|..|+||||+|+..|+ .++++.|++++
T Consensus 112 ~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~ 191 (327)
T 1sw6_A 112 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 191 (327)
T ss_dssp HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred HHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh
Confidence 34455666666666 79999999999999999999999999999999999999999999999999 78888998886
Q ss_pred CCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHC--------------------CCCCCCC---CCCCccccCCCCCc
Q 022605 129 ANIDARDRWGSTAAADAKY----YGNVEVYNILKAR--------------------GAKVPKT---KRTPMTVANPREVP 181 (294)
Q Consensus 129 ad~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~--------------------ga~~~~~---~~t~l~~a~~~~~~ 181 (294)
++++..|..|+||||+|+. .|+.+++++|++. |++++.. |.||||+|+. +
T Consensus 192 ~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~---~ 268 (327)
T 1sw6_A 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD---L 268 (327)
T ss_dssp GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS---H
T ss_pred ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH---H
Confidence 7899999999999999999 8999999999987 7777544 9999999986 6
Q ss_pred ccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcC
Q 022605 182 EYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKAR 243 (294)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 243 (294)
++|+.. +++..+..|.||||+|+..|+.++|++|++.|++....+..|+||+|+|+++|
T Consensus 269 ~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 269 KWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 677654 57778889999999999999999999999999888888889999999997654
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=6.7e-32 Score=210.32 Aligned_cols=152 Identities=22% Similarity=0.244 Sum_probs=141.6
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+..||||.|+..|+.++|++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 35799999999999999999999999887 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhh
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERIN 230 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (294)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+.+....+.
T Consensus 80 ~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAK----------------------------DMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHHHHHHHTTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCC----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 99999999999886433 45688999999999999999999999888777788
Q ss_pred hhhhHHHHHHHcCCCchhhhh
Q 022605 231 AFTHELTIVEKARHPNVVQFV 251 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L 251 (294)
.|.||+++|+..|+.+++++|
T Consensus 132 ~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 132 FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHh
Confidence 899999999999999999998
No 55
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=4.8e-33 Score=226.11 Aligned_cols=185 Identities=14% Similarity=0.186 Sum_probs=165.5
Q ss_pred CCCCCccccccCCCCCccccCCCCCCC-CCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
....+.++.++..++.+.++.++.... .....+..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 345667788888999999999888776 6677788999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC---CCCCccccCCC--------CCcc
Q 022605 116 GHVEVVKLLL-SKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG-AKVPKT---KRTPMTVANPR--------EVPE 182 (294)
Q Consensus 116 g~~~~v~~Ll-~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~---~~t~l~~a~~~--------~~~~ 182 (294)
|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|++.| ++++.. |+||||+|+.. ++++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999999999 568899999999999999999999999999999999 787544 99999999643 4677
Q ss_pred cccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 183 YELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
+|++.+ .+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 163 ~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 163 LLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 777665 677788889999999999999999999999764
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5.2e-33 Score=236.94 Aligned_cols=193 Identities=15% Similarity=0.101 Sum_probs=122.6
Q ss_pred CCCCCccccccCCCCCccccCCCCC----CCCCC----CCCCCchhHHHHHHHc---CCHHHHHHHHhcCCCC-------
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQ----DELTV----PENLDSTMQLLFMACR---GDVKGVEDLLNEGSDV------- 98 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~------- 98 (294)
....+.++.++..++.+.++.++.. +.... ..+..|.||||+|+.. |+.++|++|+++|+++
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i 90 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV 90 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHh
Confidence 3444555555556666655555431 11111 2345566666666654 6666666666655431
Q ss_pred CC----CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCC--------------CCCCHHHHHHHcCCHHHHHHHHH-
Q 022605 99 NS----IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDR--------------WGSTAAADAKYYGNVEVYNILKA- 159 (294)
Q Consensus 99 ~~----~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~--------------~g~t~L~~A~~~g~~~~v~~Ll~- 159 (294)
+. +|..|.||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++
T Consensus 91 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 11 344566666666666666666666666666666554 56666666666666666666666
Q ss_pred --CCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCc---------hhhhHhhhccCCCCh--
Q 022605 160 --RGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT---------KVWVKILDKESHKDP-- 226 (294)
Q Consensus 160 --~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~---------~~~v~~Ll~~~~~~~-- 226 (294)
.|+++ +..+..|.||||+|+..|+ .+++++|++.++...
T Consensus 171 ~~~gad~----------------------------~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~ 222 (273)
T 2pnn_A 171 SWQPADI----------------------------SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222 (273)
T ss_dssp SSCCCCT----------------------------TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCCCCc----------------------------eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc
Confidence 55554 4446677888888888887 788889987775442
Q ss_pred -----HhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 227 -----ERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 227 -----~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
..+..|.||||+|++.|+.+++++|+..++.
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 2566788999999999999999999888884
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.7e-33 Score=245.20 Aligned_cols=192 Identities=16% Similarity=0.044 Sum_probs=120.7
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC---HH
Q 022605 77 LFMACRGDVKGVEDLLNEGSDVNS-IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN---VE 152 (294)
Q Consensus 77 ~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~---~~ 152 (294)
|.|+..+..+++++|++.|+++|. +|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+ .+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHH
Confidence 444444455555555666666666 66667777777777777777777777777777666667777777776666 56
Q ss_pred HHHHHHHCC-CCC---CCCCCCCccccCC----C---CCcccccCcc-------------------hhhhhcccCCCCCc
Q 022605 153 VYNILKARG-AKV---PKTKRTPMTVANP----R---EVPEYELNPL-------------------ELQVRKADGITKGS 202 (294)
Q Consensus 153 ~v~~Ll~~g-a~~---~~~~~t~l~~a~~----~---~~~~~l~~~~-------------------~~~~~~~~~~~~t~ 202 (294)
+++.|++.+ +++ +..|+||||+|+. . ++++++++.+ +.+++..+..|.||
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~ 261 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence 666666554 333 3346677776643 2 3445554432 34455555666667
Q ss_pred eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccc
Q 022605 203 YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSF 282 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~ 282 (294)
||.|+. +++|++. .....+..|+||||+|++.|+.++|++|+..++++ ...+..|.||||+|+.
T Consensus 262 L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~--------~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 262 ILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP--------FIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT--------TCCCTTSCCGGGGTCC
T ss_pred hHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------cccCCCCCCHHHHHHh
Confidence 766664 6666655 24445578999999999999999999999999874 4577889999999998
Q ss_pred cc
Q 022605 283 HK 284 (294)
Q Consensus 283 n~ 284 (294)
+|
T Consensus 326 ~g 327 (327)
T 1sw6_A 326 LE 327 (327)
T ss_dssp --
T ss_pred cC
Confidence 75
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=7.5e-33 Score=235.93 Aligned_cols=210 Identities=15% Similarity=0.095 Sum_probs=166.0
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHh----cCCCCC----CCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCC--
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLN----EGSDVN----SIDLDGRTALHIAACE---GHVEVVKLLLSKKANI-- 131 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~----~g~~~~----~~~~~g~TpLh~A~~~---g~~~~v~~Ll~~gad~-- 131 (294)
....+..|.||||+||..|+.++|+.|++ .+++++ ..|..|+||||+|+.. |+.++|++|+++|+++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 44567889999999999999999998887 567766 4578999999999987 9999999999998763
Q ss_pred -----CC----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCc
Q 022605 132 -----DA----RDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGS 202 (294)
Q Consensus 132 -----~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~ 202 (294)
+. .|..|+||||+|+..|+.+++++|+++|++++......+.. .......+..|.||
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~--------------~~~~~~~~~~g~tp 151 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK--------------KTKGRPGFYFGELP 151 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGS--------------SCSSSCCCCSCBSH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccc--------------cccccccccCCCCH
Confidence 32 56789999999999999999999999999998763322110 01223345578999
Q ss_pred eeeeeecCchhhhHhhhc---cCCCChHhhhhhhhHHHHHHHcCC---------CchhhhhhhhcCCCCeEEEEecCCCC
Q 022605 203 YQVAKWNGTKVWVKILDK---ESHKDPERINAFTHELTIVEKARH---------PNVVQFVGAVTQNIPMMIVLEYHAKV 270 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~iv~~L~~~~~~~~l~~~~e~~~~g 270 (294)
||+|+..|+.++|++|++ .+......+..|.||||+|+..++ .+++++|...+.+..... .-....+
T Consensus 152 L~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~-~~~~~~d 230 (273)
T 2pnn_A 152 LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTL-KLEEITN 230 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-CGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccc-ccccccC
Confidence 999999999999999999 788777778899999999999998 689999998877531000 0001367
Q ss_pred CCCcccccccccccccccC
Q 022605 271 SMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 271 ~l~~t~l~~a~~n~~~~~~ 289 (294)
..|.||||+|+.+++..++
T Consensus 231 ~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCHHHHHHHhChHHHH
Confidence 7899999999999987654
No 59
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=229.14 Aligned_cols=182 Identities=18% Similarity=0.125 Sum_probs=165.3
Q ss_pred CCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH 117 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~ 117 (294)
...+.++.++..++.+.++.++..+......+..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34455777888999999999998888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC-CCCCCHHHHH--HHcCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCcccccCcc-hh
Q 022605 118 VEVVKLLLSKKANIDARD-RWGSTAAADA--KYYGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPL-EL 190 (294)
Q Consensus 118 ~~~v~~Ll~~gad~~~~~-~~g~t~L~~A--~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~~~l~~~~-~~ 190 (294)
.+++++|+++|++++..+ ..|+||||+| +..|+.+++++|+++|++++.. +.||++.++.....++++..+ +.
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~ 179 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESV 179 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEE
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccc
Confidence 999999999999999987 6999999999 9999999999999999998765 789999888777778888776 35
Q ss_pred hhhcccCCCCCceeeeeecCchhhhHhhh
Q 022605 191 QVRKADGITKGSYQVAKWNGTKVWVKILD 219 (294)
Q Consensus 191 ~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll 219 (294)
+++..+..|.||||+|+..|+.++|+.++
T Consensus 180 ~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 180 TVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp EEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cccccCCCcccHHHHHHHcCCcceeehhh
Confidence 57888999999999999999999998755
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.1e-32 Score=233.11 Aligned_cols=189 Identities=17% Similarity=0.117 Sum_probs=133.0
Q ss_pred CccccccCCCCCccccCCCC----CCCCCCCCC----CCchhHHHHHH---HcCCHHHHHHHHhcCCC-----------C
Q 022605 41 NMRFSFGRQSSLDPIRRSPV----QDELTVPEN----LDSTMQLLFMA---CRGDVKGVEDLLNEGSD-----------V 98 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~g~t~L~~Aa---~~g~~~~v~~Ll~~g~~-----------~ 98 (294)
+.++.+++.++.+.++.++. .+......+ ..|.||||+|+ ..|+.++|++|++.|++ +
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 86 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPF 86 (260)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccc
Confidence 44566666677776666555 343333332 55777777777 56777777777776633 3
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC--------------CCCCCHHHHHHHcCCHHHHHHHHH---CC
Q 022605 99 NSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD--------------RWGSTAAADAKYYGNVEVYNILKA---RG 161 (294)
Q Consensus 99 ~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~--------------~~g~t~L~~A~~~g~~~~v~~Ll~---~g 161 (294)
+..|..|+||||+|+..|+.++|++|+++|++++..+ ..|+||||+|+..|+.+++++|++ .|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 3344467777777777777777777777777777776 567777777777777777777777 66
Q ss_pred CCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCc---------hhhhHhhhccCCCC-------
Q 022605 162 AKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGT---------KVWVKILDKESHKD------- 225 (294)
Q Consensus 162 a~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~---------~~~v~~Ll~~~~~~------- 225 (294)
++++. .+..|.||||+|+..|+ .+++++|++.|+..
T Consensus 167 a~~~~----------------------------~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~ 218 (260)
T 3jxi_A 167 ADLRR----------------------------QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLE 218 (260)
T ss_dssp CCTTC----------------------------CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCcc----------------------------cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchh
Confidence 66543 35567788888887766 68888888777654
Q ss_pred hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC
Q 022605 226 PERINAFTHELTIVEKARHPNVVQFVGAVTQN 257 (294)
Q Consensus 226 ~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~ 257 (294)
...+..|.||||+|++.|+.+++++|+..+..
T Consensus 219 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 219 ALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 34566788899999888888888888877654
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.5e-32 Score=231.80 Aligned_cols=184 Identities=16% Similarity=0.105 Sum_probs=156.7
Q ss_pred CccccccCCCCCccccCCCC----CCCCCCC----CCCCchhHHHHHHHc---CCHHHHHHHHhcCCCCCCC--------
Q 022605 41 NMRFSFGRQSSLDPIRRSPV----QDELTVP----ENLDSTMQLLFMACR---GDVKGVEDLLNEGSDVNSI-------- 101 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~-------- 101 (294)
+.++.++..++.+.++.+++ .+..... .+..|.||||+|+.. |+.++|++|+++|++++..
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 83 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQC 83 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccc
Confidence 45667777888876665544 4555555 788999999999999 9999999999999877633
Q ss_pred ---CCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHH---CCC
Q 022605 102 ---DLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-------------GSTAAADAKYYGNVEVYNILKA---RGA 162 (294)
Q Consensus 102 ---~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~-------------g~t~L~~A~~~g~~~~v~~Ll~---~ga 162 (294)
|..|.||||+|+..|+.++|++|+++|++++..+.. |+||||+|+..|+.+++++|++ .|+
T Consensus 84 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 84 TDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 377999999999999999999999999999999886 9999999999999999999999 999
Q ss_pred CCCCC---CCCCccccCC--CC----------CcccccCcchhhh-------hcccCCCCCceeeeeecCchhhhHhhhc
Q 022605 163 KVPKT---KRTPMTVANP--RE----------VPEYELNPLELQV-------RKADGITKGSYQVAKWNGTKVWVKILDK 220 (294)
Q Consensus 163 ~~~~~---~~t~l~~a~~--~~----------~~~~l~~~~~~~~-------~~~~~~~~t~l~~A~~~g~~~~v~~Ll~ 220 (294)
+++.. |+||||+|+. .+ ++++|+..+ .++ +..+..|.||||+|+..|+.+++++|++
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 242 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQ 242 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 98654 9999999975 32 667777655 555 7788899999999999999999999998
Q ss_pred cCCCC
Q 022605 221 ESHKD 225 (294)
Q Consensus 221 ~~~~~ 225 (294)
.+...
T Consensus 243 ~g~~~ 247 (256)
T 2etb_A 243 REFSG 247 (256)
T ss_dssp HHHHH
T ss_pred CCCCC
Confidence 87543
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=8.8e-31 Score=204.37 Aligned_cols=152 Identities=24% Similarity=0.270 Sum_probs=140.3
Q ss_pred chhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 72 STMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+.||||.|+..|+.+++++|++. +.+++.+|..|.||||+ +..|+.+++++|+++|++++..|..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 67999999999999999999998 45899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhh
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERIN 230 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (294)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. ......+.
T Consensus 81 ~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVP----------------------------DGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHHHHHHHTTCCSCCC----------------------------CTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCc----------------------------CCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 99999999999887543 45688999999999999999999987 66666777
Q ss_pred hhhhHHHHHHHcCCCchhhhhhh
Q 022605 231 AFTHELTIVEKARHPNVVQFVGA 253 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~ 253 (294)
.|.||+++|+..++.+++++|..
T Consensus 132 ~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 132 RGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TSCCHHHHHHHSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHh
Confidence 89999999999999999999965
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2.1e-31 Score=209.95 Aligned_cols=159 Identities=26% Similarity=0.283 Sum_probs=132.4
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
.+.++.||||.|+..|+.++|++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 456788999999999999999999985 5678888888999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCCh
Q 022605 147 YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDP 226 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~ 226 (294)
..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+.+..
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~----------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 135 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVA----------------------------DLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCC----------------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HcCcHHHHHHHHhCCCCCCCc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 999999999999998876443 4456778888888888888888888777776
Q ss_pred HhhhhhhhHHHHHHHcCCCchhhhhhhhc
Q 022605 227 ERINAFTHELTIVEKARHPNVVQFVGAVT 255 (294)
Q Consensus 227 ~~~~~~~t~l~~a~~~~~~~iv~~L~~~~ 255 (294)
..+..|.||+++|.. ++.+|+++|...+
T Consensus 136 ~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 136 KKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp CCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred ccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 677778888888665 7778888886554
No 64
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=8.1e-31 Score=224.08 Aligned_cols=163 Identities=18% Similarity=0.138 Sum_probs=147.9
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCcHHHHHH-----HcCcHHHHHHHHhCCCCCCCCCCCC
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLNEGS-DVNSIDLDGRTALHIAA-----CEGHVEVVKLLLSKKANIDARDRWG 138 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~~~~g~TpLh~A~-----~~g~~~~v~~Ll~~gad~~~~~~~g 138 (294)
.+..|..|.||||+|+..|+.++|++|++.|+ +++.++..|.||||+|+ ..++.+++++|++.|++++..+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 45678889999999999999999999999997 99999999999999999 6789999999999999999999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhh
Q 022605 139 STAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKIL 218 (294)
Q Consensus 139 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L 218 (294)
+||||+|+..|+.+++++|+++|+++|.. +..|.||||+|+..|+.++|++|
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~----------------------------d~~G~TpLh~A~~~g~~~iv~~L 235 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQ----------------------------DDDGSTALMCACEHGHKEIAGLL 235 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC----------------------------CCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999999999887543 56788999999999999999999
Q ss_pred hc-cCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc
Q 022605 219 DK-ESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT 255 (294)
Q Consensus 219 l~-~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~ 255 (294)
++ .+.+....+..|.||+++|+..|+.+++++|....
T Consensus 236 l~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 236 LAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 98 67777777788999999999999999999998764
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=4.2e-31 Score=211.16 Aligned_cols=161 Identities=17% Similarity=0.117 Sum_probs=141.9
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNE-GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~ 148 (294)
.++.++||.|+..|+.++|++|++. +.+++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4577899999999999999999998 578999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHh
Q 022605 149 GNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPER 228 (294)
Q Consensus 149 g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~ 228 (294)
|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.++.....
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~----------------------------d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 134 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAV----------------------------NEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC
T ss_pred CCHHHHHHHHHcCCCCCcc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh
Confidence 9999999999999886443 456788999999999999999999888877777
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQNI 258 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~ 258 (294)
+..|.||+++|+..++.+++++|...+++.
T Consensus 135 ~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 135 NKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 788899999999999999999998888775
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.3e-31 Score=226.47 Aligned_cols=206 Identities=14% Similarity=0.052 Sum_probs=164.1
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHH----hcCCCCCCCC----CCCCcHHHHHH---HcCcHHHHHHHHhCCCC-------
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLL----NEGSDVNSID----LDGRTALHIAA---CEGHVEVVKLLLSKKAN------- 130 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll----~~g~~~~~~~----~~g~TpLh~A~---~~g~~~~v~~Ll~~gad------- 130 (294)
+..++|+||.||..|+.++|+.|+ +.|++++..+ ..|.||||+|+ ..|+.++|++|+++|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 346899999999999999655554 5899998766 67999999999 77999999999998854
Q ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeee
Q 022605 131 ----IDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVA 206 (294)
Q Consensus 131 ----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A 206 (294)
++..|..|+||||+|+..|+.++|++|+++|++++......+.. ..+....+..|.||||+|
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~--------------~~~~~~~~~~g~tpL~~A 147 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQ--------------PKDEGGYFYFGELPLSLA 147 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCS--------------SSCCCCSCCSCSSHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccC--------------cccccccccCCCCHHHHH
Confidence 44556699999999999999999999999999998763321110 012223346789999999
Q ss_pred eecCchhhhHhhhc---cCCCChHhhhhhhhHHHHHHHcCC---------CchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 207 KWNGTKVWVKILDK---ESHKDPERINAFTHELTIVEKARH---------PNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 207 ~~~g~~~~v~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
+..|+.++|++|++ .+......+..|.||||+|+..++ .+++++|...+.+..... .-....+..|.
T Consensus 148 ~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~-~~~~~~d~~g~ 226 (260)
T 3jxi_A 148 ACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDT-NLEALLNNDGL 226 (260)
T ss_dssp HHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTC-CGGGCCCTTSC
T ss_pred HHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccccc-chhhcccCCCC
Confidence 99999999999999 787777778899999999999888 589999998887531000 00034678899
Q ss_pred ccccccccccccccC
Q 022605 275 TPFLTLSFHKQTHTS 289 (294)
Q Consensus 275 t~l~~a~~n~~~~~~ 289 (294)
||||+|+.+++..++
T Consensus 227 tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 227 SPLMMAAKTGKIGIF 241 (260)
T ss_dssp CHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHH
Confidence 999999999987654
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.6e-31 Score=209.41 Aligned_cols=168 Identities=19% Similarity=0.200 Sum_probs=144.7
Q ss_pred CCccccccCCCCCccccCCCCCCCC-CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 40 NNMRFSFGRQSSLDPIRRSPVQDEL-TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
...++.++..++.+.++.++..+.. ....+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 3466778888999999998888776 566788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGI 198 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~ 198 (294)
+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.. +..
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~----------------------------~~~ 134 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTE----------------------------ADS 134 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----------------------------CCC
Confidence 9999999999999999999999999999999999999999999887443 456
Q ss_pred CCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhH
Q 022605 199 TKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHE 235 (294)
Q Consensus 199 ~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~ 235 (294)
|.||||+|+..|+.+++++|++.+.........+.||
T Consensus 135 g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 135 GYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 8899999999999999999998775443333334443
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=5.4e-31 Score=220.43 Aligned_cols=186 Identities=15% Similarity=0.047 Sum_probs=107.3
Q ss_pred CCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC
Q 022605 70 LDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYG 149 (294)
Q Consensus 70 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g 149 (294)
..|.||||.|+..|+.++++.|+++|++++. +..|.||||+|+..|+.++|++|++.|++++..|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 4577888888888888888888888887775 366778888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhh
Q 022605 150 NVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERI 229 (294)
Q Consensus 150 ~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~ 229 (294)
+.+++++|+++|++++.. +..|.||||+|+..|+.++|++|++.+++....+
T Consensus 82 ~~~~v~~Ll~~ga~~~~~----------------------------d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAA----------------------------DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp CHHHHHHHHHHTCCTTCC----------------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHHcCCCCCcc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceec
Confidence 888888888877766432 4456778888888888888888887776666555
Q ss_pred hhhh-hHHHHH--HHcCCCchhhhhhhhcCCCCeE---EEEecCCCCCCCccccccccccccc
Q 022605 230 NAFT-HELTIV--EKARHPNVVQFVGAVTQNIPMM---IVLEYHAKVSMPITPFLTLSFHKQT 286 (294)
Q Consensus 230 ~~~~-t~l~~a--~~~~~~~iv~~L~~~~~~~~l~---~~~e~~~~g~l~~t~l~~a~~n~~~ 286 (294)
..+. ||+|+| +..|+.+++++|...+++.... .. .......+.++++++...|.+
T Consensus 134 ~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~--~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 134 YSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI--YALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp SSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEE--EESSCBCCSSTTBCCBCSSCE
T ss_pred CCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceE--EEEeccCCCCCCcccccCCCE
Confidence 5555 888877 6677788888887766554220 00 011133345677777766654
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.7e-30 Score=200.95 Aligned_cols=158 Identities=23% Similarity=0.286 Sum_probs=137.7
Q ss_pred CCCCCccccccCCCCCccccCCCCCCC-CCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQDE-LTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
+...+.++.++..++.+.++.++.... .....+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 344556777888889898988887544 4455677899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcc
Q 022605 116 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKA 195 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~ 195 (294)
|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~---------------------------- 137 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK---------------------------- 137 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------
T ss_pred CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc----------------------------
Confidence 9999999999999999999999999999999999999999999999887443
Q ss_pred cCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 196 DGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 196 ~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
+..|.||||+|+. |+.+++++|++.|+
T Consensus 138 ~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 138 NRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 5567888888776 88899999987654
No 70
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.4e-30 Score=203.42 Aligned_cols=157 Identities=29% Similarity=0.387 Sum_probs=144.0
Q ss_pred CCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCc
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGH 117 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~ 117 (294)
.....++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 34456677888999999999999988888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccC
Q 022605 118 VEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADG 197 (294)
Q Consensus 118 ~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~ 197 (294)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +.
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------------------~~ 144 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQ----------------------------DK 144 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc----------------------------CC
Confidence 99999999999999999999999999999999999999999999886443 45
Q ss_pred CCCCceeeeeecCchhhhHhhhccC
Q 022605 198 ITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 198 ~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
.|.|||++|+..|+.+++++|++.|
T Consensus 145 ~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 145 FGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 6889999999999999999998654
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.5e-30 Score=202.15 Aligned_cols=157 Identities=19% Similarity=0.192 Sum_probs=142.9
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
..+.++.++..++.+.++.++..+......+..|.||||+|+. |+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 3456677788899999999998888888889999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGI 198 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~ 198 (294)
+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++. ++..+..
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------------~~~~~~~ 136 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN---------------------------VGHRNHK 136 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC---------------------------TTCCCTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC---------------------------CCCcCCC
Confidence 9999999999999999999999999999999999999999998862 1233567
Q ss_pred CCCceeeeeecCchhhhHhhhccCC
Q 022605 199 TKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 199 ~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
|.||||+|+..|+.+++++|++.|+
T Consensus 137 g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 137 GDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 8899999999999999999998875
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.9e-30 Score=217.16 Aligned_cols=213 Identities=19% Similarity=0.068 Sum_probs=136.8
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
+.+.++.+++.+..+.++.++..+.... .+..|.||||+|+..|+.++|++|+++|+++|.+|..|.||||+|+..|+.
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 83 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT 83 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCcc-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 4556677777788888888887776554 347789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGI 198 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~ 198 (294)
++|++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.. +..
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~----------------------------~~~ 135 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM----------------------------TYS 135 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CSS
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee----------------------------cCC
Confidence 9999999999999999999999999999999999999999999998654 222
Q ss_pred CC-Cceeee--eecCchhhhHhhhccCCCChHhh---------hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 199 TK-GSYQVA--KWNGTKVWVKILDKESHKDPERI---------NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 199 ~~-t~l~~A--~~~g~~~~v~~Ll~~~~~~~~~~---------~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
+. ||||+| +..|+.+++++|++.++.....+ ..+.++.+++...| ++++.|.....++.-+.--+
T Consensus 136 ~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G--~~i~vl~~~~~~~~~Ww~~~- 212 (239)
T 1ycs_B 136 DMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG--DCMTIIHREDEDEIEWWWAR- 212 (239)
T ss_dssp SCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS--CEEEECCCCTTSCSSEEEEE-
T ss_pred CCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC--CEEEEEEecCCCCCCEEEEE-
Confidence 22 666666 56677777777776654433222 12345555554444 35555544433322222222
Q ss_pred CCCCCCCccccccccccc
Q 022605 267 HAKVSMPITPFLTLSFHK 284 (294)
Q Consensus 267 ~~~g~l~~t~l~~a~~n~ 284 (294)
.+|..|.+|..+.....
T Consensus 213 -~~~~~G~~P~~yv~~~~ 229 (239)
T 1ycs_B 213 -LNDKEGYVPRNLLGLYP 229 (239)
T ss_dssp -ETTEEEEEEGGGEECCC
T ss_pred -ECCcEEEeehHHeeECC
Confidence 25666777777765543
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=8.3e-30 Score=203.64 Aligned_cols=164 Identities=23% Similarity=0.212 Sum_probs=144.8
Q ss_pred CCCCCccccccCCCCCccccCCCCCC-CCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 37 PRRNNMRFSFGRQSSLDPIRRSPVQD-ELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
+...+.++.++..++.+.++.++... ......+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 34556778888899999999888774 44667888999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcc
Q 022605 116 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKA 195 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~ 195 (294)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~---------------------------- 134 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC---------------------------- 134 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC----------------------------
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh----------------------------
Confidence 9999999999999999999999999999999999999999999999886433
Q ss_pred cCCCCCceeeeeecCchhhhHhhhccCCCChHh
Q 022605 196 DGITKGSYQVAKWNGTKVWVKILDKESHKDPER 228 (294)
Q Consensus 196 ~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~ 228 (294)
+..|.|||++|+..++.+++++|++.+......
T Consensus 135 ~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~ 167 (179)
T 3f6q_A 135 NKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI 167 (179)
T ss_dssp CTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCB
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccC
Confidence 556788999999999999999999888766543
No 74
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=7.3e-30 Score=206.16 Aligned_cols=161 Identities=22% Similarity=0.230 Sum_probs=148.6
Q ss_pred CCCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHH
Q 022605 34 SFDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAA 113 (294)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~ 113 (294)
..+..+.++++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 34566778888888899999999999888888888999999999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhh
Q 022605 114 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVR 193 (294)
Q Consensus 114 ~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~ 193 (294)
..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--------------------------- 162 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA--------------------------- 162 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------------------------
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------------------------
Confidence 99999999999999999999999999999999999999999999999988643
Q ss_pred cccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 194 KADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 194 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
.+..|.|||++|+..|+.+++++|++.+
T Consensus 163 -~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 163 -RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp -BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred -cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 3567889999999999999999998654
No 75
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9.4e-30 Score=200.86 Aligned_cols=156 Identities=19% Similarity=0.221 Sum_probs=144.4
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 45677888889999999999988888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGI 198 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~ 198 (294)
+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------------------~~~ 134 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE----------------------------TDS 134 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTT
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc----------------------------CCC
Confidence 9999999999999999999999999999999999999999999886443 456
Q ss_pred CCCceeeeeecCchhhhHhhhccC
Q 022605 199 TKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 199 ~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
|.|||++|+..|+.+++++|++.+
T Consensus 135 g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 135 GYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHHH
Confidence 889999999999999999998664
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.4e-29 Score=193.27 Aligned_cols=131 Identities=24% Similarity=0.274 Sum_probs=121.8
Q ss_pred CCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCC-CCCHH
Q 022605 64 LTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRW-GSTAA 142 (294)
Q Consensus 64 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~-g~t~L 142 (294)
.....+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++..|.. |+|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 345677889999999999999999999999999999999999999999999 9999999999999999999999 99999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 143 ADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 143 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
|+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~----------------------------d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVC----------------------------DAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCC----------------------------SSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999887543 557889999999999999999999877
Q ss_pred C
Q 022605 223 H 223 (294)
Q Consensus 223 ~ 223 (294)
+
T Consensus 135 a 135 (136)
T 1d9s_A 135 G 135 (136)
T ss_dssp C
T ss_pred C
Confidence 5
No 77
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.1e-30 Score=223.18 Aligned_cols=182 Identities=18% Similarity=0.092 Sum_probs=162.6
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CCCCCCCCCCCHHHHHH--
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSD--VNSIDLDGRTALHIAACEGHVEVVKLLLSKKA-NIDARDRWGSTAAADAK-- 146 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~ga-d~~~~~~~g~t~L~~A~-- 146 (294)
..+++|.|+..|+.+.++.+++.+.+ +|.+|..|+||||+|+..|+.++|++|+++|+ +++..+..|+||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 45778999999999999999988766 89999999999999999999999999999998 99999999999999999
Q ss_pred ---HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 147 ---YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 147 ---~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
..++.+++++|++.|.+++. .+..|.||||+|+..|+.++|++|++.|+
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~----------------------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga 207 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAK----------------------------ASQAGQTALMLAVSHGRVDVVKALLACEA 207 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCC----------------------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HhhhhhhHHHHHHHHHcCCCccc----------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 56889999999999865432 24568899999999999999999999998
Q ss_pred CChHhhhhhhhHHHHHHHcCCCchhhhhhh-hcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 224 KDPERINAFTHELTIVEKARHPNVVQFVGA-VTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 224 ~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~-~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
+....+..|.||||+|+..|+.+++++|.. .+.+ ....+..|.||||+|+.+++..++
T Consensus 208 d~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad--------~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 208 DVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD--------ISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC--------TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC--------CcCcCCCCCCHHHHHHHcCCHHHH
Confidence 888888899999999999999999999998 6765 344678899999999999987653
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.8e-29 Score=197.34 Aligned_cols=144 Identities=22% Similarity=0.201 Sum_probs=117.6
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCC-HHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGST-AAAD 144 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t-~L~~ 144 (294)
...+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++..|..|+| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 345677899999999999999999999999999999999999999995 99999999999999999999999999 9999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 145 AKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 145 A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|+.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~----------------------------d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVR----------------------------DAWGRLPVDLAEELGHRDVARYLRAAAGG 136 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCC----------------------------CTTCCCHHHHHHHHTCHHHHHHHSSCC--
T ss_pred HHHCCCHHHHHHHHHcCCCCccc----------------------------CCCCCCHHHHHHHhCHHHHHHHHHHcCCC
Confidence 99999999999999999887543 45688999999999999999999999988
Q ss_pred ChHhhhhhhhHHHH
Q 022605 225 DPERINAFTHELTI 238 (294)
Q Consensus 225 ~~~~~~~~~t~l~~ 238 (294)
....+..|.||.+-
T Consensus 137 ~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 137 TRGSNHARIDAAEG 150 (156)
T ss_dssp --------------
T ss_pred CCccCcCcCccccc
Confidence 88877888887663
No 79
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.3e-29 Score=197.33 Aligned_cols=148 Identities=27% Similarity=0.293 Sum_probs=132.6
Q ss_pred ccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHH
Q 022605 42 MRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVV 121 (294)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v 121 (294)
.++.++..++.+.++.++..+.... .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 83 (153)
T 1awc_B 5 KLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV 83 (153)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHH
Confidence 4556667777788877777665443 578899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCC
Q 022605 122 KLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKG 201 (294)
Q Consensus 122 ~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t 201 (294)
++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.. +..|.|
T Consensus 84 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~----------------------------~~~g~t 135 (153)
T 1awc_B 84 EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ----------------------------SKFCKT 135 (153)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTTSCC
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----------------------------CCCCCC
Confidence 9999999999999999999999999999999999999999886432 556789
Q ss_pred ceeeeeecCchhhhHhh
Q 022605 202 SYQVAKWNGTKVWVKIL 218 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~L 218 (294)
|||+|+..|+.+++++|
T Consensus 136 ~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 136 AFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999887
No 80
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=1.7e-28 Score=187.34 Aligned_cols=129 Identities=32% Similarity=0.422 Sum_probs=116.9
Q ss_pred CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 022605 66 VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADA 145 (294)
Q Consensus 66 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A 145 (294)
......+.||||+||..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 34556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 146 KYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 146 ~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~----------------------------~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQ----------------------------DKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcCc----------------------------CCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999886433 556889999999999999999998654
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=5.1e-29 Score=194.35 Aligned_cols=151 Identities=21% Similarity=0.214 Sum_probs=134.4
Q ss_pred CccccccCCCCCccccCCCCC-CCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQ-DELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVE 119 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~ 119 (294)
+.++.++..++.+.++.++.. .......+..|.||||+ |..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 82 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 345667777888888888776 22556678889999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCC
Q 022605 120 VVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGIT 199 (294)
Q Consensus 120 ~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~ 199 (294)
++++|+++|++++..|..|+||||+|+..|+.+++++|++. ++++. .+..|
T Consensus 83 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~----------------------------~~~~g 133 (156)
T 1bd8_A 83 TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR----------------------------RDARG 133 (156)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC----------------------------CCTTS
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC----------------------------cCCCC
Confidence 99999999999999999999999999999999999999987 65533 35678
Q ss_pred CCceeeeeecCchhhhHhhhcc
Q 022605 200 KGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 200 ~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
.||||+|+..|+.+++++|++.
T Consensus 134 ~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 134 LTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhh
Confidence 8999999999999999999854
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.2e-28 Score=198.44 Aligned_cols=155 Identities=14% Similarity=0.098 Sum_probs=128.2
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEGHV----EVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g~~----~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
+.++|+.||..|+.+.++.+++.+. +.++ ..|+||||+|+..|+. +++++|+++|+|+|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 5678999999999999999998774 4455 7799999999999975 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCC-Cceeeeeec-----Cchhh
Q 022605 147 YYGN------VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITK-GSYQVAKWN-----GTKVW 214 (294)
Q Consensus 147 ~~g~------~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~-t~l~~A~~~-----g~~~~ 214 (294)
..++ .+++++|+++|+++|.. +..|. ||||+|+.. ++.++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~----------------------------d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITAL----------------------------YKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSC----------------------------BGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCcc----------------------------CCCcCchHHHHHHHcCCChhhHHHH
Confidence 9987 57899999999998765 23344 455555442 34568
Q ss_pred hHhhhc-cCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC
Q 022605 215 VKILDK-ESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ 256 (294)
Q Consensus 215 v~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~ 256 (294)
+++|++ .|++....+..|.||+|+|++.++.++|++|.....
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 888888 787777777888899999999999999998876543
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.4e-27 Score=178.81 Aligned_cols=125 Identities=38% Similarity=0.495 Sum_probs=117.4
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 151 VEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 151 ~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
.+++++|+++|++++. .+..|.|||++|+..|+.+++++|++.|+
T Consensus 81 ~~~~~~Ll~~g~~~~~----------------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNA----------------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHTTCCTTC----------------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcc----------------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999887643 24567899999999999999999998875
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.4e-27 Score=182.36 Aligned_cols=127 Identities=28% Similarity=0.342 Sum_probs=110.9
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc
Q 022605 147 YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
..|+.+++++|+++|++++.. +..|.|||++|+..+..+++++|.+.
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~----------------------------~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAV----------------------------NIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HcCCHHHHHHHHHcCCCCCCC----------------------------CCCCCCHHHHHhhccHHHHHhhcccc
Confidence 999999999999999987543 34456666666666666666665533
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=1.2e-28 Score=197.83 Aligned_cols=135 Identities=27% Similarity=0.299 Sum_probs=113.4
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHH
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 147 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A~~ 147 (294)
+..|.||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 5678999999999999999999999 99999999999999999999999999999999999999998 899999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhh
Q 022605 148 YGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILD 219 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll 219 (294)
.|+.+++++|+++|++++.. |+||||+|+... ....+.++|++|+..|+.+++++|.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~---------------~~~~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREIL---------------KTTPKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH---------------HTCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc---------------cCcccccHHHHHHHcCHHHHHHHHH
Confidence 99999999999999998543 667766664311 1123345666666666666666554
No 86
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=4.5e-27 Score=176.13 Aligned_cols=111 Identities=29% Similarity=0.414 Sum_probs=101.3
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~ 148 (294)
+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCC---CCCCccccCCCC
Q 022605 149 GNVEVYNILKARGAKVPKT---KRTPMTVANPRE 179 (294)
Q Consensus 149 g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~ 179 (294)
|+.+++++|+++|++++.. |+||+++|...+
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 9999999999999998544 777777775543
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=9e-28 Score=183.24 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=124.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccc
Q 022605 95 GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTV 174 (294)
Q Consensus 95 g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~ 174 (294)
+++++.++..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+. |+.+++++|+++|++++..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~------- 73 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA------- 73 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC-------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc-------
Confidence 47899999999999999999999999999999999999999999999999999 9999999999999887543
Q ss_pred cCCCCCcccccCcchhhhhcccCC-CCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh
Q 022605 175 ANPREVPEYELNPLELQVRKADGI-TKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA 253 (294)
Q Consensus 175 a~~~~~~~~l~~~~~~~~~~~~~~-~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~ 253 (294)
+.. |.||||+|+..|+.+++++|++.+......+..|.||+++|+..++.+++++|..
T Consensus 74 ---------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 74 ---------------------DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp ---------------------BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred ---------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 445 7899999999999999999999998887778899999999999999999999988
Q ss_pred hcCC
Q 022605 254 VTQN 257 (294)
Q Consensus 254 ~~~~ 257 (294)
.+++
T Consensus 133 ~Gad 136 (136)
T 1d9s_A 133 ATGD 136 (136)
T ss_dssp HHCC
T ss_pred cCCC
Confidence 7763
No 88
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.4e-27 Score=200.42 Aligned_cols=137 Identities=27% Similarity=0.297 Sum_probs=118.7
Q ss_pred CCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHH
Q 022605 69 NLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARD-RWGSTAAADAKY 147 (294)
Q Consensus 69 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A~~ 147 (294)
+..|.||||+||..|+.++|++|++ |+++|.+|..|+||||+||..|+.++|++|+++|++++..+ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4579999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCC---CCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc
Q 022605 148 YGNVEVYNILKARGAKVPKT---KRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 148 ~g~~~~v~~Ll~~ga~~~~~---~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
.|+.+++++|+++|++++.. |+||||+|+.. .....+.|||++|+..|+.+++++|++.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~---------------~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREI---------------LKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH---------------HTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH---------------HhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 99999999999999998644 78888877531 1123456777777777777777777654
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.8e-28 Score=197.37 Aligned_cols=151 Identities=15% Similarity=0.105 Sum_probs=128.2
Q ss_pred CccccccCCCCCccccCCCCCCCCCCCCC-CCchhHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDELTVPEN-LDSTMQLLFMACRGDV----KGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~Aa~~g~~----~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
..+|.+++.|+.+.+..++..+. ...+ ..|+||||+|+.+|+. +++++||++|+++|.+|..|+||||+|+..
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~ 85 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG 85 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 45677888888887766654432 2233 6799999999999985 599999999999999999999999999998
Q ss_pred Cc------HHHHHHHHhCCCCCCCCCCCCC-CHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCccccCCCCCcc
Q 022605 116 GH------VEVVKLLLSKKANIDARDRWGS-TAAADAKYYG-----NVEVYNILKA-RGAKVPKTKRTPMTVANPREVPE 182 (294)
Q Consensus 116 g~------~~~v~~Ll~~gad~~~~~~~g~-t~L~~A~~~g-----~~~~v~~Ll~-~ga~~~~~~~t~l~~a~~~~~~~ 182 (294)
|+ .+++++|+++|+|+|.+|..|+ ||||+|+..+ +.+++++|++ +|++++..
T Consensus 86 ~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~--------------- 150 (186)
T 3t8k_A 86 GGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK--------------- 150 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC---------------
T ss_pred CCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc---------------
Confidence 87 6899999999999999999999 9999999954 3569999999 89887554
Q ss_pred cccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc
Q 022605 183 YELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
+..|.||||+|+..|+.++|++|.+.
T Consensus 151 -------------d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 151 -------------DKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp -------------CTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred -------------CCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 66788999999999999999998744
No 90
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=5.9e-26 Score=161.57 Aligned_cols=93 Identities=42% Similarity=0.582 Sum_probs=89.6
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCC
Q 022605 151 VEVYNILKARGAK 163 (294)
Q Consensus 151 ~~~v~~Ll~~ga~ 163 (294)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 91
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.1e-26 Score=191.86 Aligned_cols=134 Identities=22% Similarity=0.290 Sum_probs=112.9
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCCCHHHHHH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSK-KANIDARDRWGSTAAADAK 146 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~~~~g~t~L~~A~ 146 (294)
.+..|.||||+||..|+.++|++|++.|++++.+|..|+||||+||..|+.++|++|+++ |++++..|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 345688999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCCh
Q 022605 147 YYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDP 226 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~ 226 (294)
..|+.+++++|+++|++++.. +..|.|||++|+..|+.++++.|+..+....
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~----------------------------~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLR----------------------------NIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCC----------------------------CTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HcCCHHHHHHHHHcCCCCccc----------------------------cCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999987543 5567889999999999999999987776554
Q ss_pred Hhh
Q 022605 227 ERI 229 (294)
Q Consensus 227 ~~~ 229 (294)
..+
T Consensus 201 ~~~ 203 (222)
T 3ehr_A 201 LSN 203 (222)
T ss_dssp ---
T ss_pred ccc
Confidence 433
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.3e-28 Score=218.67 Aligned_cols=176 Identities=14% Similarity=0.034 Sum_probs=137.8
Q ss_pred CCCCchhHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC---CCCCCCCCCH
Q 022605 68 ENLDSTMQLLFMACRGDVKGVEDLLNEGSDV---NSIDLDGRTALHIAACEGHVEVVKLLLSKKANI---DARDRWGSTA 141 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~---~~~~~~g~t~ 141 (294)
.+.++.||||+||..|+.++|++|+++|++. +..+..|.||||+||..|+.++|++|+++|+|+ +..+.+ +||
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 3456789999999999999999999999732 234557889999999999999999999999863 222333 899
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeee-ecCchhhhHhhhc
Q 022605 142 AADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAK-WNGTKVWVKILDK 220 (294)
Q Consensus 142 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~-~~g~~~~v~~Ll~ 220 (294)
||+|+..|+.++|++|+++|++++. ...+..|.||||+|+ .+|+.++|++|++
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~--------------------------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEAT--------------------------AMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHH--------------------------HHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHcCCccch--------------------------hccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 9999999999999999999887421 112334678999999 9999999999997
Q ss_pred cCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCcccccccccccccccC
Q 022605 221 ESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHTS 289 (294)
Q Consensus 221 ~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~~ 289 (294)
.+ ..+.||+++|+..|+.+++++|...+.+.. ...++++.|+.+|+..++
T Consensus 221 ~g-------a~~~taL~~Aa~~g~~evv~lL~~~ga~~~------------~~~~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 221 CP-------VMLAYAEIHEFEYGEKYVNPFIARHVNRLK------------EMHDAFKLSNPDGVFDLV 270 (376)
T ss_dssp SH-------HHHHHHHHCTTTTTTTTHHHHHHHHHHHHH------------HHHTTTTTTSSSSCCCCS
T ss_pred CC-------CccchHHHHHHHCCCHHHHHHHHhcCcccc------------cccHHHHHHHHCCChhhh
Confidence 54 237899999999999999999988776421 123578888888887755
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=6.8e-30 Score=226.91 Aligned_cols=229 Identities=10% Similarity=-0.000 Sum_probs=160.2
Q ss_pred CCCccccccCCCCCccccCCCCCCCCC---CCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCC---CCCCCCCCcHHHHH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELT---VPENLDSTMQLLFMACRGDVKGVEDLLNEGSDV---NSIDLDGRTALHIA 112 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~---~~~~~~g~TpLh~A 112 (294)
..+.++.++..|+.+.++.++..+... ...+..|.||||+||..|+.++|++|+++|+++ +..+.+ .||||+|
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 346778888899999999998877632 244567899999999999999999999999762 222333 8999999
Q ss_pred HHcCcHHHHHHHHhCCCCCCC--CCCCCCCHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCccccCCC---CCcccccC
Q 022605 113 ACEGHVEVVKLLLSKKANIDA--RDRWGSTAAADAK-YYGNVEVYNILKARGAKVPKTKRTPMTVANPR---EVPEYELN 186 (294)
Q Consensus 113 ~~~g~~~~v~~Ll~~gad~~~--~~~~g~t~L~~A~-~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~---~~~~~l~~ 186 (294)
|..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++|++|++.|++ +.|||++|+.. +++++|+.
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----~~taL~~Aa~~g~~evv~lL~~ 246 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM----LAYAEIHEFEYGEKYVNPFIAR 246 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH----HHHHHHCTTTTTTTTHHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc----cchHHHHHHHCCCHHHHHHHHh
Confidence 999999999999999999887 8888999999999 99999999999998754 88999999875 45667665
Q ss_pred cchhhhhcccCCCCCceeeeeecCchhhh------------HhhhccCCCC--------------------hHhhhhhhh
Q 022605 187 PLELQVRKADGITKGSYQVAKWNGTKVWV------------KILDKESHKD--------------------PERINAFTH 234 (294)
Q Consensus 187 ~~~~~~~~~~~~~~t~l~~A~~~g~~~~v------------~~Ll~~~~~~--------------------~~~~~~~~t 234 (294)
.+ .+++.. .++++.|+.+|+.+++ +.|+..+... ....+.+.+
T Consensus 247 ~g-a~~~~~----~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~ 321 (376)
T 2aja_A 247 HV-NRLKEM----HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE 321 (376)
T ss_dssp HH-HHHHHH----HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCH
T ss_pred cC-cccccc----cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccH
Confidence 54 233222 2367788888877744 2333222110 011123568
Q ss_pred HHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCccccccccccccccc
Q 022605 235 ELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPITPFLTLSFHKQTHT 288 (294)
Q Consensus 235 ~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~t~l~~a~~n~~~~~ 288 (294)
|+++|+..|+.+++++|...+.- ....+.|++..|-.+|++.+
T Consensus 322 ~L~~A~~~g~~e~v~lLl~~~~v-----------~~~~~~~~~~~~~~~~~~~~ 364 (376)
T 2aja_A 322 LLRLALRLGNQGACALLLSIPSV-----------LALTKANNYYINETGGRLDL 364 (376)
T ss_dssp HHHHHHHHTCTTHHHHHTTSHHH-----------HHSCC---------------
T ss_pred HHHHHHHcCcHHHHHHHHcChHH-----------HHHHHHhccccccccccccH
Confidence 99999999999999999876432 23445566666666666554
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.8e-26 Score=199.45 Aligned_cols=141 Identities=18% Similarity=0.249 Sum_probs=120.2
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCCCH
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDVNS------IDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTA 141 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~------~~~~g~TpLh~A~~~---g~~~~v~~Ll~~gad~~~~~~~g~t~ 141 (294)
.+.++|+.|+..|+.+.|+.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++..|..|+||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 456889999999999999999999999998 689999999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc
Q 022605 142 AADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 142 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~----------------------------d~~G~TpL~~A~~~~~~~iv~~Ll~~ 281 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTV----------------------------NEAGETALDIARKKHHKECEELLEQA 281 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCC----------------------------CTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 99999999999999999999987543 45678899999999999999999876
Q ss_pred CCCChHhhhhhhhHHHHHHHcCCC
Q 022605 222 SHKDPERINAFTHELTIVEKARHP 245 (294)
Q Consensus 222 ~~~~~~~~~~~~t~l~~a~~~~~~ 245 (294)
++ +.|.||+|+|++.|+.
T Consensus 282 ga------~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 282 QA------GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp HH------HTTSSCCC--------
T ss_pred cC------CCCCChhHHHHhcCCc
Confidence 54 2578999999988874
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.4e-26 Score=180.84 Aligned_cols=138 Identities=20% Similarity=0.221 Sum_probs=118.0
Q ss_pred CCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCc-HHHHHH
Q 022605 35 FDPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRT-ALHIAA 113 (294)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~T-pLh~A~ 113 (294)
.+....+.++.++..++.+.++.++..+......+..|.||||+|+ .|+.+++++|+++|++++.+|..|.| |||+|+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 3445677888888999999999999998888888999999999985 99999999999999999999999999 999999
Q ss_pred HcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC---CCCCcc
Q 022605 114 CEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKT---KRTPMT 173 (294)
Q Consensus 114 ~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~---~~t~l~ 173 (294)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.. |.||.+
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 999999999999999999999999999999999999999999999999998654 666654
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2e-26 Score=175.79 Aligned_cols=134 Identities=21% Similarity=0.184 Sum_probs=116.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccc
Q 022605 95 GSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTV 174 (294)
Q Consensus 95 g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~ 174 (294)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~------- 72 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT------- 72 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-------
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCc-------
Confidence 6777 67999999999999999999999999999999999999999999999999999999999999876443
Q ss_pred cCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh
Q 022605 175 ANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254 (294)
Q Consensus 175 a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~ 254 (294)
+..|.||||+|+..|+.+++++|++.+......+..|.||+++|+..++.+++++|...
T Consensus 73 ---------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 73 ---------------------GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp ---------------------CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred ---------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 45578999999999999999999999988888888999999999999999999988665
Q ss_pred cCC
Q 022605 255 TQN 257 (294)
Q Consensus 255 ~~~ 257 (294)
...
T Consensus 132 ~~s 134 (137)
T 3c5r_A 132 ESS 134 (137)
T ss_dssp ---
T ss_pred ccC
Confidence 443
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.2e-25 Score=171.32 Aligned_cols=126 Identities=28% Similarity=0.366 Sum_probs=117.1
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
.+...+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34455667788889999999999998888888899999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 022605 116 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARG 161 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 161 (294)
|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999986
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=6.6e-25 Score=164.20 Aligned_cols=125 Identities=33% Similarity=0.419 Sum_probs=116.2
Q ss_pred CCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 39 RNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
+.+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 34566677778888888888888777778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 163 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 163 (294)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999986
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=3.3e-25 Score=191.47 Aligned_cols=136 Identities=20% Similarity=0.168 Sum_probs=118.4
Q ss_pred CccccccCCCCCccccCCCCCCCCCCC------CCCCchhHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDELTVP------ENLDSTMQLLFMACR---GDVKGVEDLLNEGSDVNSIDLDGRTALHI 111 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~ 111 (294)
+.++.++..++.+.+..++..+..... .+..|.||||+|+.. |+.++|++|+++|+++|.+|..|+||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 346777788888888888777766655 588999999999997 89999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCC
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPRE 179 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~ 179 (294)
|+..|+.++|++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..+
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---~g~tpLh~A~~~g 297 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---TTSSCCC------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---CCCChhHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999877 4678888776543
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=1.8e-24 Score=191.37 Aligned_cols=147 Identities=20% Similarity=0.233 Sum_probs=117.5
Q ss_pred CCCCchhHHHHHHHc-CCHHHHHHHHhcCCCCCCCC--CCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 022605 68 ENLDSTMQLLFMACR-GDVKGVEDLLNEGSDVNSID--LDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 144 (294)
Q Consensus 68 ~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~~--~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~ 144 (294)
....+.|+||.|+.. |+.++|++|+++|+++|..+ ..|.||||+|+..|+.++|++|+++|++++..|..|+||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 345678999999999 99999999999999999988 889999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCC
Q 022605 145 AKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHK 224 (294)
Q Consensus 145 A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~ 224 (294)
|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+..+..
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~----------------------------d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGAR----------------------------DSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHcCcHHHHHHHHHCcCCCCCc----------------------------CCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999987543 56788999999999999999999866543
Q ss_pred Ch---HhhhhhhhHHHHHHHc
Q 022605 225 DP---ERINAFTHELTIVEKA 242 (294)
Q Consensus 225 ~~---~~~~~~~t~l~~a~~~ 242 (294)
.. .....+.|+++++...
T Consensus 327 ~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 327 EAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp ---------------------
T ss_pred cccccccCCCCCCHHHHHHHH
Confidence 22 2223445666655443
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.4e-24 Score=160.51 Aligned_cols=105 Identities=39% Similarity=0.521 Sum_probs=97.6
Q ss_pred CCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 022605 67 PENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAK 146 (294)
Q Consensus 67 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~ 146 (294)
..|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCC---CCCC
Q 022605 147 YYGNVEVYNILKARGAKVPKT---KRTP 171 (294)
Q Consensus 147 ~~g~~~~v~~Ll~~ga~~~~~---~~t~ 171 (294)
..++.+++++|+++|+++|.. +.+|
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 999999999999999998533 5544
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=7.1e-24 Score=195.48 Aligned_cols=128 Identities=18% Similarity=0.262 Sum_probs=113.5
Q ss_pred chhHHHHHHHcCCHHHHHHHHhcCCCCCCC------CCCCCcHHHHHHH---cCcHHHHHHHHhCCCCCCCCCCCCCCHH
Q 022605 72 STMQLLFMACRGDVKGVEDLLNEGSDVNSI------DLDGRTALHIAAC---EGHVEVVKLLLSKKANIDARDRWGSTAA 142 (294)
Q Consensus 72 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~------~~~g~TpLh~A~~---~g~~~~v~~Ll~~gad~~~~~~~g~t~L 142 (294)
..+.||.|+..|+.++|+.|+++|+++|.+ |..|.||||+||. .|+.++|++|+++|+|+|..|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 447899999999999999999999999987 8899999999976 9999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccC
Q 022605 143 ADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKES 222 (294)
Q Consensus 143 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~ 222 (294)
|+|+..|+.++|++|+++|++++.. +..|.||||+|+..|+.+++++|++.|
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~----------------------------d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTV----------------------------NEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCC----------------------------CTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCc----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999999987554 556778888888888888888888877
Q ss_pred CCChH
Q 022605 223 HKDPE 227 (294)
Q Consensus 223 ~~~~~ 227 (294)
+....
T Consensus 264 a~~~~ 268 (497)
T 3lvq_E 264 AGTFA 268 (497)
T ss_dssp C----
T ss_pred CCCCC
Confidence 65543
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.4e-23 Score=177.81 Aligned_cols=126 Identities=20% Similarity=0.204 Sum_probs=113.9
Q ss_pred CchhHHHHHHHcCCHHHHHHHHhcCCCC------CCCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCCCH
Q 022605 71 DSTMQLLFMACRGDVKGVEDLLNEGSDV------NSIDLDGRTALHIAACE---GHVEVVKLLLSKKANIDARDRWGSTA 141 (294)
Q Consensus 71 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~------~~~~~~g~TpLh~A~~~---g~~~~v~~Ll~~gad~~~~~~~g~t~ 141 (294)
...++|+.|+..|+.+.++.+++.|+++ +..|..|.||||+|+.. |+.+++++|+++|+++|..|..|+||
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCH
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCH
Confidence 3468999999999999999999999984 45578899999999999 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhcc
Q 022605 142 AADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKE 221 (294)
Q Consensus 142 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~ 221 (294)
||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~~~~----------------------------d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASIEIA----------------------------NESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCC----------------------------CTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCc----------------------------cCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999999999987543 56788999999999999999999977
Q ss_pred CCC
Q 022605 222 SHK 224 (294)
Q Consensus 222 ~~~ 224 (294)
++.
T Consensus 261 ga~ 263 (278)
T 1dcq_A 261 LSG 263 (278)
T ss_dssp HTT
T ss_pred CCC
Confidence 763
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.1e-23 Score=179.99 Aligned_cols=130 Identities=18% Similarity=0.126 Sum_probs=111.4
Q ss_pred ccccCCCCCccccCCCCCCCC------CCCCCCCchhHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHH
Q 022605 44 FSFGRQSSLDPIRRSPVQDEL------TVPENLDSTMQLLFMACR---GDVKGVEDLLNEGSDVNSIDLDGRTALHIAAC 114 (294)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~ 114 (294)
+.+...++.+.+..++..+.. ....+..|.||||+||.. |+.++|++|+++|+++|.+|..|+||||+|+.
T Consensus 135 ~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 135 CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH
T ss_pred hhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHH
Confidence 444555666666555554444 334478899999999999 89999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCC
Q 022605 115 EGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPR 178 (294)
Q Consensus 115 ~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~ 178 (294)
.|+.++|++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++ .+++|.+...
T Consensus 215 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~v~~ 273 (278)
T 1dcq_A 215 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG-----RFNSHVHVEY 273 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT-----CCCSSCCCCC
T ss_pred cCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcceeeec
Confidence 9999999999999999999999999999999999999999999999885 4666666543
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.3e-24 Score=195.03 Aligned_cols=133 Identities=20% Similarity=0.180 Sum_probs=114.0
Q ss_pred CccccccCCCCCccccCCCCCCCCCCCC------CCCchhHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCCCcHHHH
Q 022605 41 NMRFSFGRQSSLDPIRRSPVQDELTVPE------NLDSTMQLLFMAC---RGDVKGVEDLLNEGSDVNSIDLDGRTALHI 111 (294)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~t~L~~Aa~---~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~ 111 (294)
..++.++..++.+.++.++..+...+.. +..|.||||+|+. .|+.++|++|+++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4577788889999998888888776554 7889999999976 899999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccC
Q 022605 112 AACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVAN 176 (294)
Q Consensus 112 A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~ 176 (294)
|+..|+.++|++|+++|||++..|..|+||||+|+..|+.+++++|+++|++++. +|+|.+.
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~---~~~h~~~ 275 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA---FPLHVDY 275 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC---Ccceeec
Confidence 9999999999999999999999999999999999999999999999999999865 5777653
No 106
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=6.3e-24 Score=158.90 Aligned_cols=113 Identities=27% Similarity=0.228 Sum_probs=102.6
Q ss_pred CCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHc
Q 022605 36 DPRRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACE 115 (294)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~ 115 (294)
+....+.++.++..++.+.++.++..+......+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34455677788888999999999988888888899999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Q 022605 116 GHVEVVKLLLSKKANIDARDRWGSTAAADAKYY 148 (294)
Q Consensus 116 g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~ 148 (294)
|+.+++++|+++|++++..|..|.||||+|...
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 999999999999999999999999999999443
No 107
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=4.4e-24 Score=176.17 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=112.5
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCccccCCCC
Q 022605 101 IDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKAR-GAKVPKTKRTPMTVANPRE 179 (294)
Q Consensus 101 ~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~t~l~~a~~~~ 179 (294)
.+..|.||||+||..|+.++|++|++.|++++..|..|+||||+|+..|+.+++++|++. |++++..
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~------------ 136 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQ------------ 136 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCC------------
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcccc------------
Confidence 367789999999999999999999999999999999999999999999999999999998 8776443
Q ss_pred CcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC
Q 022605 180 VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP 259 (294)
Q Consensus 180 ~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~ 259 (294)
+..|.||||+|+..|+.++|++|++.|+.....+..|.||+++|+..++.++++.|...+....
T Consensus 137 ----------------d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 137 ----------------NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp ----------------CTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred ----------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 5568899999999999999999999998888888899999999999999999999998888776
Q ss_pred eEEEEecCCCC
Q 022605 260 MMIVLEYHAKV 270 (294)
Q Consensus 260 l~~~~e~~~~g 270 (294)
+.-..+|....
T Consensus 201 ~~~~~~~l~~~ 211 (222)
T 3ehr_A 201 LSNAEDYLDDE 211 (222)
T ss_dssp -----------
T ss_pred ccchhhhcccc
Confidence 65555555443
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=4.6e-22 Score=145.91 Aligned_cols=93 Identities=39% Similarity=0.487 Sum_probs=86.5
Q ss_pred CCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 022605 65 TVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAAD 144 (294)
Q Consensus 65 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~ 144 (294)
....+.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHH
Q 022605 145 AKYYGNVEVYNIL 157 (294)
Q Consensus 145 A~~~g~~~~v~~L 157 (294)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.2e-22 Score=142.07 Aligned_cols=92 Identities=39% Similarity=0.519 Sum_probs=84.1
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCCCccc
Q 022605 104 DGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPREVPEY 183 (294)
Q Consensus 104 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~~~~~ 183 (294)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~---------------- 64 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK---------------- 64 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc----------------
Confidence 4899999999999999999999999999999999999999999999999999999999887443
Q ss_pred ccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCC
Q 022605 184 ELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESH 223 (294)
Q Consensus 184 l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~ 223 (294)
+..|.||||+|+..|+.+++++|++.|+
T Consensus 65 ------------d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 65 ------------DKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp ------------CTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ------------CCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5568899999999999999999998775
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=3e-22 Score=167.76 Aligned_cols=109 Identities=28% Similarity=0.288 Sum_probs=101.4
Q ss_pred CCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcC
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEG 116 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g 116 (294)
.+.+.++.++..++.+.++.++. +...+..+..|.||||+||..|+.++|++|+++|+++|.++ ..|+||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 44567788888999999999998 77778889999999999999999999999999999999998 88999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKY 147 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~ 147 (294)
+.++|++|+++|++++..|..|+||||+|+.
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 9999999999999999999999999999984
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=5.5e-22 Score=175.45 Aligned_cols=122 Identities=25% Similarity=0.308 Sum_probs=112.9
Q ss_pred ccccccCC-CCCccccCCCCCCCCCCCCC--CCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCcH
Q 022605 42 MRFSFGRQ-SSLDPIRRSPVQDELTVPEN--LDSTMQLLFMACRGDVKGVEDLLNEGSDVNSIDLDGRTALHIAACEGHV 118 (294)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~TpLh~A~~~g~~ 118 (294)
.++.++.. ++.+.++.++..+...+..+ ..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 202 ~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 281 (368)
T 3jue_A 202 LLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHT 281 (368)
T ss_dssp HHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcH
Confidence 55666777 88888988888888777776 8899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Q 022605 119 EVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAK 163 (294)
Q Consensus 119 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 163 (294)
++|++|+++|++++..|..|.||||+|+..|+.+++++|+..+..
T Consensus 282 ~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 282 GLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999988644
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=4.2e-22 Score=159.46 Aligned_cols=112 Identities=28% Similarity=0.267 Sum_probs=102.9
Q ss_pred CCCCccccccCCCCCccccCCCCCCCCCCCCCCCchhHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCcHHHHHHHcC
Q 022605 38 RRNNMRFSFGRQSSLDPIRRSPVQDELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGSDVNSID-LDGRTALHIAACEG 116 (294)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~TpLh~A~~~g 116 (294)
.+.+.++.++..++.+.++.++. +......+..|.||||+|+..|+.++|++|+++|+++|.++ ..|+||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 44567788888899999998888 77778889999999999999999999999999999999998 88999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 022605 117 HVEVVKLLLSKKANIDARDRWGSTAAADAKYYGN 150 (294)
Q Consensus 117 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~ 150 (294)
+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc
Confidence 9999999999999999999999999999987643
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.4e-21 Score=142.91 Aligned_cols=109 Identities=36% Similarity=0.374 Sum_probs=95.6
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCCCC
Q 022605 100 SIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANPRE 179 (294)
Q Consensus 100 ~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~~~ 179 (294)
.+|.+|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..++.+++++|+++|++++..
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~------------ 71 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNAR------------ 71 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCC------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCccc------------
Confidence 46889999999999999999999999999999999999999999999999999999999999876432
Q ss_pred CcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhhhccCCCChHhhhhhhhHH
Q 022605 180 VPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKILDKESHKDPERINAFTHEL 236 (294)
Q Consensus 180 ~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l 236 (294)
+..|.||||+|+..|+.+++++|++.|++.......+.+|-
T Consensus 72 ----------------d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 72 ----------------SKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp ----------------CTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred ----------------CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 45678999999999999999999998877766666666653
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=2.9e-19 Score=130.89 Aligned_cols=93 Identities=29% Similarity=0.371 Sum_probs=81.4
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCccccCC
Q 022605 98 VNSIDLDGRTALHIAACEGHVEVVKLLLSKKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTKRTPMTVANP 177 (294)
Q Consensus 98 ~~~~~~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~t~l~~a~~ 177 (294)
+...|.+|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~---------- 86 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQ---------- 86 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----------
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----------
Confidence 3456789999999999999999999999999999999999999999999999999999999999887443
Q ss_pred CCCcccccCcchhhhhcccCCCCCceeeeeecCchhhhHhh
Q 022605 178 REVPEYELNPLELQVRKADGITKGSYQVAKWNGTKVWVKIL 218 (294)
Q Consensus 178 ~~~~~~l~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~L 218 (294)
+..|.||||+|+..|+.+++++|
T Consensus 87 ------------------d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 87 ------------------DKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ------------------CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ------------------ccCCCcHHHHHHHcCCHHHHHHh
Confidence 55678899999999999999876
No 115
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=94.59 E-value=0.015 Score=49.48 Aligned_cols=78 Identities=24% Similarity=0.412 Sum_probs=54.4
Q ss_pred ccCCCC-CceeeeeecC-------chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 195 ADGITK-GSYQVAKWNG-------TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 195 ~~~~~~-t~l~~A~~~g-------~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
.-+.|. ...+.|.+.| ...+||.|... ........+...+.+..+..|++||++++.+..+.++++++||
T Consensus 33 ~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEECSSCEEEEEEEC-------CEEEEEEECCC---CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc--cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 334443 4456665533 34466766432 2222334567788888999999999999999999999999999
Q ss_pred CCCCCCCc
Q 022605 267 HAKVSMPI 274 (294)
Q Consensus 267 ~~~g~l~~ 274 (294)
+.+|+|..
T Consensus 111 ~~~G~L~~ 118 (308)
T 4gt4_A 111 CSHGDLHE 118 (308)
T ss_dssp CSSCBHHH
T ss_pred CCCCcHHH
Confidence 99999863
No 116
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=94.42 E-value=0.02 Score=48.60 Aligned_cols=79 Identities=22% Similarity=0.379 Sum_probs=55.0
Q ss_pred hhcccCCCC-Cceeeeeec-------CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEE
Q 022605 192 VRKADGITK-GSYQVAKWN-------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIV 263 (294)
Q Consensus 192 ~~~~~~~~~-t~l~~A~~~-------g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~ 263 (294)
+...-+.|. ...+.|... |...+||.|- . ......+.+...+.+..+..|++||+++..+..+.+++++
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~-~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-D--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEEC-S--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeC-C--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 334444443 345555443 3344566653 1 2334445677888888889999999999999988999999
Q ss_pred EecCCCCCCC
Q 022605 264 LEYHAKVSMP 273 (294)
Q Consensus 264 ~e~~~~g~l~ 273 (294)
|||+.+|+|.
T Consensus 94 ~Ey~~~G~L~ 103 (299)
T 4asz_A 94 FEYMKHGDLN 103 (299)
T ss_dssp EECCTTCBHH
T ss_pred EEcCCCCcHH
Confidence 9999999986
No 117
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=93.98 E-value=0.022 Score=48.96 Aligned_cols=81 Identities=22% Similarity=0.345 Sum_probs=56.7
Q ss_pred hhhcccCCCC-Cceeeeeec-------CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEE
Q 022605 191 QVRKADGITK-GSYQVAKWN-------GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMI 262 (294)
Q Consensus 191 ~~~~~~~~~~-t~l~~A~~~-------g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~ 262 (294)
.+...-+.|. .-.+.|.+. |...+||.|-. ......+.+...+.+.....|++||+++..+....++++
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~---~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC---CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3334444443 344555443 33456676632 233444567788888889999999999999999999999
Q ss_pred EEecCCCCCCCc
Q 022605 263 VLEYHAKVSMPI 274 (294)
Q Consensus 263 ~~e~~~~g~l~~ 274 (294)
+|||+.+|+|..
T Consensus 121 V~Ey~~~G~L~~ 132 (329)
T 4aoj_A 121 VFEYMRHGDLNR 132 (329)
T ss_dssp EEECCTTCBHHH
T ss_pred EEEcCCCCcHHH
Confidence 999999999863
No 118
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=93.56 E-value=0.048 Score=46.35 Aligned_cols=83 Identities=31% Similarity=0.507 Sum_probs=57.1
Q ss_pred chhhhhcccCCCC-CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 188 LELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 188 ~~~~~~~~~~~~~-t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
.++.+...-+.|. ...+.|...+. .+||.+- ...........+...+.+..+..|++||+++..+. +..++++|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~~-vAvK~~~-~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILK-VVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSSE-EEEEECC-CSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCc-EEEEEEE-ecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEc
Confidence 3444445555554 44566655553 4566553 23344445566778889999999999999998765 4578999999
Q ss_pred CCCCCCC
Q 022605 267 HAKVSMP 273 (294)
Q Consensus 267 ~~~g~l~ 273 (294)
+.+|+|.
T Consensus 113 ~~gGsL~ 119 (307)
T 3omv_A 113 CEGSSLY 119 (307)
T ss_dssp CSSCBHH
T ss_pred CCCCCHH
Confidence 9999986
No 119
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=91.03 E-value=0.089 Score=45.56 Aligned_cols=71 Identities=18% Similarity=0.331 Sum_probs=52.9
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|.. .|..-+||.+.... ............+.+.....|++||+++.....+..++++|||+.+|+|.
T Consensus 39 ~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~ 111 (350)
T 4b9d_A 39 KAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF 111 (350)
T ss_dssp CEEEEEETTTCCEEEEEEEECTT-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred EEEEEEECCCCCEEEEEEEehHH-CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 4455543 35666777764322 33333455677888899999999999999988888999999999999985
No 120
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=88.49 E-value=0.17 Score=43.89 Aligned_cols=89 Identities=29% Similarity=0.375 Sum_probs=54.0
Q ss_pred cccCcchhhhhcccCCCC-CceeeeeecCc-------hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCC-Cchhhhhhh
Q 022605 183 YELNPLELQVRKADGITK-GSYQVAKWNGT-------KVWVKILDKESHKDPERINAFTHELTIVEKARH-PNVVQFVGA 253 (294)
Q Consensus 183 ~l~~~~~~~~~~~~~~~~-t~l~~A~~~g~-------~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~-~~iv~~L~~ 253 (294)
+.+...++.+...-+.|. .-.+.|...+. ...||.|. .. ........+...+.+.....| ++||+++..
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~-~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EG-ATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEEC-TT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEc-cc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 334444444444445453 34566655542 23445443 22 223333455667777666655 899999998
Q ss_pred hcC-CCCeEEEEecCCCCCCC
Q 022605 254 VTQ-NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 254 ~~~-~~~l~~~~e~~~~g~l~ 273 (294)
+.. +.++++++||+.+|+|.
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~ 157 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLS 157 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHH
T ss_pred EEecCCEEEEEEEcCCCCCHH
Confidence 755 45789999999999986
No 121
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=87.83 E-value=0.091 Score=44.44 Aligned_cols=69 Identities=29% Similarity=0.409 Sum_probs=46.5
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC----CeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI----PMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~----~l~~~~e~~~~g~l~ 273 (294)
...+.|.+.|...+||.+-.. ..........+.......|++||+++..+..+. .++++|||+.+|+|.
T Consensus 17 G~Vy~~~~~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~ 89 (303)
T 3hmm_A 17 GEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 89 (303)
T ss_dssp SEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHH
T ss_pred eEEEEEEECCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHH
Confidence 456778888887788876321 111112223344444568999999998875442 579999999999986
No 122
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=84.52 E-value=0.057 Score=45.99 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=37.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......+.....|++||++......+..++++|||+.+|+|.
T Consensus 78 ~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~ 120 (311)
T 4aw0_A 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL 120 (311)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHH
Confidence 3456777788889999999999988888999999999999885
No 123
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=83.53 E-value=0.71 Score=38.75 Aligned_cols=82 Identities=39% Similarity=0.643 Sum_probs=58.2
Q ss_pred hhhcccCCCC-CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCC
Q 022605 191 QVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAK 269 (294)
Q Consensus 191 ~~~~~~~~~~-t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~ 269 (294)
.+...-+.|. ...+.|...|...++|.+... .............+.......|++|++++.........++++||+..
T Consensus 40 ~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ-DFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEECCC-CCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeeEeecCCCeEEEEEEECCCcEEEEEecCC-CCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 3333334443 345677677777777776533 23334444556777888888999999999998888889999999999
Q ss_pred CCCC
Q 022605 270 VSMP 273 (294)
Q Consensus 270 g~l~ 273 (294)
|++.
T Consensus 119 ~~L~ 122 (309)
T 3p86_A 119 GSLY 122 (309)
T ss_dssp CBHH
T ss_pred CcHH
Confidence 8875
No 124
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=83.03 E-value=0.27 Score=40.92 Aligned_cols=71 Identities=20% Similarity=0.390 Sum_probs=46.3
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|.. .|..-++|.+-................+.+.....|++||++......+..++++|||+ .|++.
T Consensus 28 ~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~ 100 (275)
T 3hyh_A 28 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELF 100 (275)
T ss_dssp CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHH
T ss_pred EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHH
Confidence 3444443 35555666664332222233344567788888899999999999888888899999998 46543
No 125
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=81.86 E-value=0.44 Score=41.07 Aligned_cols=69 Identities=22% Similarity=0.288 Sum_probs=49.1
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|... |..-+||.+-..... ........+.+.....|++||+++.....+..++++|||+.+|+|.
T Consensus 89 ~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 89 IVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 34555443 455566665322211 1233456788888899999999999998888999999999999875
No 126
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=81.62 E-value=0.48 Score=42.06 Aligned_cols=69 Identities=22% Similarity=0.289 Sum_probs=49.3
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|... |..-+||.+-.... .........+.+.....|++||+++.....+..++++|||+.+|+|.
T Consensus 166 ~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 166 IVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred EEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 34555443 45556666532211 11233457788888999999999999998888999999999999875
No 127
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=80.57 E-value=0.35 Score=40.57 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=47.2
Q ss_pred ceeeeeecC--chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC----CCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNG--TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ----NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~----~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|.... ..-++|.+.... ............+.+.....|++||+++..... +..++++|||+.+|+|.
T Consensus 41 ~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~ 117 (290)
T 3fpq_A 41 TVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK 117 (290)
T ss_dssp EEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHH
T ss_pred EEEEEEECCCCeEEEEEEEchhh-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHH
Confidence 455555443 333445543222 233334556778888899999999999976532 34579999999999985
No 128
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=78.08 E-value=1.9 Score=38.95 Aligned_cols=86 Identities=23% Similarity=0.469 Sum_probs=56.5
Q ss_pred ccCcchhhhhcccCCCC-Cceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCe
Q 022605 184 ELNPLELQVRKADGITK-GSYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPM 260 (294)
Q Consensus 184 l~~~~~~~~~~~~~~~~-t~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l 260 (294)
.+...++.+...-+.|. ...+.|... +...++|.+... .. ....+...+.......|++|++++..+.....+
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 291 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-cc---chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence 33333344444444443 445666655 344556655422 11 234456677778888999999999999888899
Q ss_pred EEEEecCCCCCCC
Q 022605 261 MIVLEYHAKVSMP 273 (294)
Q Consensus 261 ~~~~e~~~~g~l~ 273 (294)
++++||+..|+|.
T Consensus 292 ~lv~E~~~~g~L~ 304 (495)
T 1opk_A 292 YIITEFMTYGNLL 304 (495)
T ss_dssp EEEEECCTTCBHH
T ss_pred EEEEEccCCCCHH
Confidence 9999999998875
No 129
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=77.35 E-value=2.2 Score=36.83 Aligned_cols=70 Identities=27% Similarity=0.377 Sum_probs=49.2
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+... ............+.......|++|++++..+.....+++++||+..|++.
T Consensus 129 ~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~ 200 (377)
T 3cbl_A 129 EVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 200 (377)
T ss_dssp EEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHH
Confidence 45555553 445556655321 22333345566777777889999999999988888999999999998864
No 130
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=75.58 E-value=1 Score=37.30 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=50.9
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |..-++|.+.........................|++|++++.....+...++++||+..++|.
T Consensus 46 ~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~ 119 (286)
T 3uqc_A 46 QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQ 119 (286)
T ss_dssp EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHH
T ss_pred EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHH
Confidence 45555544 4556677775443333443445556667778889999999998888788899999999887765
No 131
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=75.09 E-value=0.48 Score=40.67 Aligned_cols=41 Identities=24% Similarity=0.257 Sum_probs=35.0
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
..+.+.....|++||+++.....+..++++|||+.+|+|..
T Consensus 99 ~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~ 139 (336)
T 4g3f_A 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ 139 (336)
T ss_dssp HHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence 35566677799999999998888888999999999999863
No 132
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=69.98 E-value=1.7 Score=38.57 Aligned_cols=68 Identities=32% Similarity=0.545 Sum_probs=49.5
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC-CeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI-PMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~-~l~~~~e~~~~g~l~ 273 (294)
.-.+.+...|...+||.+.... ........+.......|++|++++..+.... .+++++||+..|+|.
T Consensus 207 g~V~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 207 GDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEEEEETTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred eeEEEEEecCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 3456777777777777664221 2234556777778889999999998865554 789999999999875
No 133
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=68.72 E-value=2 Score=37.11 Aligned_cols=71 Identities=21% Similarity=0.324 Sum_probs=50.9
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |..-++|.+... .............+.+.....|++|++++........+++++||+..|++.
T Consensus 42 ~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 114 (389)
T 3gni_B 42 TVNLARYKPTGEYVTVRRINLE-ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 114 (389)
T ss_dssp EEEEEEETTTCCEEEEEEEEGG-GSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred EEEEEEEcCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHH
Confidence 45555544 555566666432 223333445556778888889999999999888888999999999998875
No 134
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=67.00 E-value=2.2 Score=35.71 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=44.3
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC------------CeEEEEecCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI------------PMMIVLEYHA 268 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~------------~l~~~~e~~~ 268 (294)
.+.|... |..-++|.+. .. ............+.+.....|++||+++....... .++++|||+.
T Consensus 21 V~~a~~~~~~~~vAiK~i~-~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~ 98 (299)
T 4g31_A 21 VFEAKNKVDDCNYAIKRIR-LP-NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCR 98 (299)
T ss_dssp EEEEEETTTCCEEEEEEEE-EC-SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCC
T ss_pred EEEEEECCCCCEEEEEEEe-cc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCC
Confidence 4445433 4455566553 21 22333344567778888889999999997653222 3689999999
Q ss_pred CCCCC
Q 022605 269 KVSMP 273 (294)
Q Consensus 269 ~g~l~ 273 (294)
.|+|.
T Consensus 99 gg~L~ 103 (299)
T 4g31_A 99 KENLK 103 (299)
T ss_dssp SCCHH
T ss_pred CCcHH
Confidence 99875
No 135
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=66.43 E-value=1.2 Score=37.63 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=32.4
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.....|++||++......+..++++|||+.+|+|.
T Consensus 75 ~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~ 114 (304)
T 3ubd_A 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114 (304)
T ss_dssp ---CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEH
T ss_pred HHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHH
Confidence 3444555668999999999988888999999999999985
No 136
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=65.61 E-value=1.4 Score=35.61 Aligned_cols=72 Identities=21% Similarity=0.354 Sum_probs=48.9
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC--CCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~--~~l~~~~e~~~~g~l~ 273 (294)
...+.|...|...++|.+... .............+.......|++|++++..+... ...++++||+..|+|.
T Consensus 24 g~V~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 97 (271)
T 3kmu_A 24 GELWKGRWQGNDIVVKVLKVR-DWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLY 97 (271)
T ss_dssp EEEEEEEETTEEEEEEEECCT-TCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHH
T ss_pred ceEEEEEECCeeEEEEEeccc-ccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHH
Confidence 345667677777777766532 22333333444555555566899999999877655 6789999999998875
No 137
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=65.54 E-value=2.5 Score=34.21 Aligned_cols=43 Identities=26% Similarity=0.535 Sum_probs=36.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 51 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 51 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 3456777777889999999999888888899999999988765
No 138
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=65.31 E-value=2.3 Score=34.38 Aligned_cols=72 Identities=21% Similarity=0.393 Sum_probs=46.4
Q ss_pred ceeeeeecCchhhhHhhhccCCCC-hHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKD-PERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|...|...++|.+....... ..........+.......|++|++++..+......++++||+..+++.
T Consensus 22 ~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (271)
T 3dtc_A 22 KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN 94 (271)
T ss_dssp EEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHH
T ss_pred EEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHH
Confidence 456666667777777664322111 112234456677777889999999999888888899999999888764
No 139
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=65.29 E-value=2 Score=35.59 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=45.9
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|...++|.+.................+.......|++|++++.....+...++++||+..|++.
T Consensus 36 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~ 99 (294)
T 4eqm_A 36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS 99 (294)
T ss_dssp CSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred CCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHH
Confidence 4445566554333333344445566777777789999999999888888899999999998875
No 140
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=63.13 E-value=3 Score=35.53 Aligned_cols=64 Identities=23% Similarity=0.313 Sum_probs=43.2
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+........................ +|+.|++++........+++++||+..|+|.
T Consensus 34 ~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~ 98 (345)
T 3a8x_A 34 DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 98 (345)
T ss_dssp TEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 444556655433323333333344555555555 8999999999888888899999999998874
No 141
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=62.17 E-value=5.8 Score=33.24 Aligned_cols=70 Identities=27% Similarity=0.426 Sum_probs=48.6
Q ss_pred ceeeeeecC-------chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNG-------TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g-------~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|...+ ..-++|.+... ............+.......|++|++++..+......++++||+..|+|.
T Consensus 62 ~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 138 (343)
T 1luf_A 62 RVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138 (343)
T ss_dssp EEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eEEEEEecCcCCCCCceeEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHH
Confidence 445555443 33455555321 22333345566777788889999999999888888999999999998875
No 142
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=62.01 E-value=5.1 Score=33.00 Aligned_cols=72 Identities=24% Similarity=0.283 Sum_probs=50.8
Q ss_pred ceeeeeecCchhhhHhhhccCC-CChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESH-KDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|...|...++|.+..... ............+.......|++|++++.........++++||+..|++.
T Consensus 46 ~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 118 (307)
T 2nru_A 46 VVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118 (307)
T ss_dssp EEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred EEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHH
Confidence 4566666666666776643221 12222334556777788889999999999888888899999999988874
No 143
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=61.14 E-value=5 Score=36.97 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=37.3
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+.....|++||++......+..++++|||+..|+|.
T Consensus 200 ~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~ 242 (573)
T 3uto_A 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF 242 (573)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHH
Confidence 3456777888889999999999988888999999999999874
No 144
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=60.99 E-value=4 Score=35.19 Aligned_cols=60 Identities=32% Similarity=0.489 Sum_probs=43.6
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..++|.+. .. ............+.......|++|++++..+......++++||+..|+|.
T Consensus 75 ~vaiK~~~-~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~ 134 (373)
T 2qol_A 75 SVAIKTLK-VG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134 (373)
T ss_dssp CEEEEECC-TT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eEEEEEec-Cc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHH
Confidence 34555543 11 23333345566777777789999999999988888899999999998875
No 145
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=60.12 E-value=5.3 Score=33.01 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=48.3
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+.. ............+.......|++|++++..+..+...++++||+..|++.
T Consensus 25 ~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (310)
T 3s95_A 25 QAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95 (310)
T ss_dssp EEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred EEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence 34445433 44455555532 23344445566777777789999999999888888899999999998875
No 146
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=59.56 E-value=4.8 Score=32.57 Aligned_cols=71 Identities=20% Similarity=0.126 Sum_probs=45.6
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |..-++|.+......... .......+...... .|++|++++.....+...++++||+..|+|.
T Consensus 26 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (289)
T 1x8b_A 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA 99 (289)
T ss_dssp EEEEEEETTTCCEEEEEEEECCCTTSHH-HHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred EEEEEEEcCCCceEEEEEecccccccHH-HHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHH
Confidence 34455443 555566665432222222 22333444444455 8999999999888888899999999998875
No 147
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=59.16 E-value=3.9 Score=33.50 Aligned_cols=63 Identities=25% Similarity=0.285 Sum_probs=43.9
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..-++|.+.................+......+|++|++++.........++++||+..+++.
T Consensus 41 ~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (294)
T 2rku_A 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 103 (294)
T ss_dssp CEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred ceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 334455544332233333344556677777889999999998888888899999999988764
No 148
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=58.29 E-value=6.2 Score=32.08 Aligned_cols=68 Identities=26% Similarity=0.503 Sum_probs=46.8
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... +...++|.+. ............+.......|++|++++.........++++||+..+++.
T Consensus 28 ~V~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 97 (288)
T 3kfa_A 28 EVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97 (288)
T ss_dssp SEEEEEEGGGTEEEEEEEEC----SCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred eEEEeEecCCCEEEEEEecC----cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 45555544 3344555443 12222334556777888889999999999888888899999999887764
No 149
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=58.14 E-value=3.9 Score=34.50 Aligned_cols=70 Identities=23% Similarity=0.480 Sum_probs=49.0
Q ss_pred eeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...|.. .|...++|.+.... ............+.......|++|++++........+++++||+..|++.
T Consensus 31 V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~ 102 (328)
T 3fe3_A 31 VKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102 (328)
T ss_dssp EEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred EEEEEECCCCCEEEEEEEEhhc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHH
Confidence 444442 45556666654222 23333344556777788889999999999888888899999999988874
No 150
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=57.84 E-value=3 Score=36.44 Aligned_cols=63 Identities=21% Similarity=0.308 Sum_probs=39.2
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHH-cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~-~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..-++|.+...................+... .+|+.|++++........+++++||+..|+|.
T Consensus 78 ~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~ 141 (396)
T 4dc2_A 78 RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM 141 (396)
T ss_dssp EEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred CEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHH
Confidence 3445555543322222222223344444433 38999999999888888899999999999874
No 151
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=56.08 E-value=4.4 Score=33.48 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=50.0
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .|...++|.+.................+.......|++|++++.........++++||+..|++.
T Consensus 47 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 120 (310)
T 2wqm_A 47 EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS 120 (310)
T ss_dssp EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHH
T ss_pred eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHH
Confidence 3444442 35555666654333333444445556777777889999999998888888899999999988775
No 152
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=55.43 E-value=7.2 Score=32.27 Aligned_cols=66 Identities=32% Similarity=0.525 Sum_probs=45.5
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...+.|...+...++|.+.. ..........+.......|++|++++..+. ...++++||+..|++.
T Consensus 22 g~V~~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 22 GVVCKAKWRAKDVAIKQIES-----ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp SEEEEEEETTEEEEEEECSS-----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred ceEEEEEECCeeEEEEEecC-----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 34566666666666665531 112234556777788889999999987665 3478999999998874
No 153
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=55.31 E-value=4.6 Score=34.01 Aligned_cols=62 Identities=26% Similarity=0.290 Sum_probs=43.6
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.-++|.+.................+.......|++|++++.........++++||+..+++.
T Consensus 68 ~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 129 (335)
T 2owb_A 68 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL 129 (335)
T ss_dssp EEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred EEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHH
Confidence 34455543332233333344556677777789999999998888888899999999988764
No 154
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=54.70 E-value=2.8 Score=35.33 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=49.9
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHh--------------hhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPER--------------INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~--------------~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
...+.|...|..-++|.+.......... .......+.......|++|++++.........++++||
T Consensus 45 g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 124 (348)
T 2pml_X 45 NKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEY 124 (348)
T ss_dssp CCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEEC
T ss_pred eEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEec
Confidence 3456666666666666654221111100 03345566677777899999999988888889999999
Q ss_pred CCCCCCCc
Q 022605 267 HAKVSMPI 274 (294)
Q Consensus 267 ~~~g~l~~ 274 (294)
+..|+|..
T Consensus 125 ~~~~~L~~ 132 (348)
T 2pml_X 125 MENDSILK 132 (348)
T ss_dssp CTTCBSSE
T ss_pred cCCCcHHH
Confidence 99988764
No 155
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=54.49 E-value=2.7 Score=35.28 Aligned_cols=88 Identities=20% Similarity=0.285 Sum_probs=52.6
Q ss_pred ccccCcchhhhhcccCCCC-CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC--
Q 022605 182 EYELNPLELQVRKADGITK-GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI-- 258 (294)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~-t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~-- 258 (294)
.+.+...++.+...-+.|. ...+.|...|..-++|.+... ..........+.......|++|++++.......
T Consensus 18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (322)
T 3soc_A 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93 (322)
T ss_dssp CEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred ccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence 3444444444444444443 456777777777777766321 111112222344445568999999998765543
Q ss_pred --CeEEEEecCCCCCCC
Q 022605 259 --PMMIVLEYHAKVSMP 273 (294)
Q Consensus 259 --~l~~~~e~~~~g~l~ 273 (294)
.+++++||+..|+|.
T Consensus 94 ~~~~~lv~e~~~~g~L~ 110 (322)
T 3soc_A 94 DVDLWLITAFHEKGSLS 110 (322)
T ss_dssp SEEEEEEEECCTTCBHH
T ss_pred CceEEEEEecCCCCCHH
Confidence 369999999999875
No 156
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=53.70 E-value=9.9 Score=31.79 Aligned_cols=43 Identities=26% Similarity=0.605 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+...... .|++|++++..+......++++||+..|+|.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 129 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHH
Confidence 344555555555 8999999999888888999999999988875
No 157
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=52.81 E-value=1.9 Score=37.99 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=35.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.....|+.|++++........+++++||+..|+|.
T Consensus 108 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~ 149 (412)
T 2vd5_A 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL 149 (412)
T ss_dssp HHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHH
Confidence 345666777889999999998888888899999999999875
No 158
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=52.68 E-value=6.3 Score=33.72 Aligned_cols=70 Identities=16% Similarity=0.271 Sum_probs=47.9
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|... |..-++|.+... .............+.+.....|++|++++.........++++||+..|++.
T Consensus 45 V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~ 116 (362)
T 2bdw_A 45 VRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 116 (362)
T ss_dssp EEEEEETTTCCEEEEEEEETT-TCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EEEEEECCCCCEEEEEEEEcc-cCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHH
Confidence 4444432 444555655322 222333344556777788889999999999888888899999999998874
No 159
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=52.39 E-value=9.3 Score=32.73 Aligned_cols=44 Identities=25% Similarity=0.598 Sum_probs=36.7
Q ss_pred hhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+...... .|++|++++..+.....+++++||+..|+|.
T Consensus 131 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~ 175 (370)
T 2psq_A 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175 (370)
T ss_dssp HHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHH
Confidence 3455666777777 8999999999988888999999999999875
No 160
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=52.37 E-value=11 Score=32.24 Aligned_cols=44 Identities=32% Similarity=0.468 Sum_probs=36.8
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++.........++++||+..|+|.
T Consensus 119 ~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~ 162 (367)
T 3l9p_A 119 LDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162 (367)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHH
Confidence 34556677777889999999999988888899999999988774
No 161
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=51.07 E-value=4.4 Score=32.55 Aligned_cols=43 Identities=26% Similarity=0.509 Sum_probs=35.6
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..+++.
T Consensus 49 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 49 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 3455666777779999999998888888899999999988765
No 162
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=51.00 E-value=3.8 Score=38.66 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=32.4
Q ss_pred HHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 236 l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+.......|++||++.........++++|||+.+|+|.
T Consensus 243 l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~ 280 (689)
T 3v5w_A 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 280 (689)
T ss_dssp HHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHH
Confidence 44444568999999999988888999999999999985
No 163
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=50.79 E-value=1.6 Score=38.77 Aligned_cols=42 Identities=12% Similarity=0.207 Sum_probs=35.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.....|+.|++++..+.....+++++||+.+|+|.
T Consensus 121 ~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~ 162 (437)
T 4aw2_A 121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL 162 (437)
T ss_dssp HHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHH
Confidence 345666777889999999999988888999999999999875
No 164
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=50.15 E-value=7.3 Score=33.08 Aligned_cols=43 Identities=16% Similarity=0.389 Sum_probs=36.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+.....|++|++++.....+..+++++||+..|+|.
T Consensus 72 ~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 114 (351)
T 3c0i_A 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC 114 (351)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHH
Confidence 3456677777889999999999888888899999999998874
No 165
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=48.44 E-value=1.3 Score=38.94 Aligned_cols=41 Identities=27% Similarity=0.275 Sum_probs=35.4
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+....+|++|++++........+++++||+.+|+|.
T Consensus 117 ~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~ 157 (410)
T 3v8s_A 117 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157 (410)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 45666777889999999998888888899999999998875
No 166
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=48.13 E-value=8.7 Score=32.18 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=37.4
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++..+......++++||+..|+|.
T Consensus 73 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~ 116 (345)
T 3hko_A 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLL 116 (345)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHH
Confidence 34556777778889999999999988888899999999999875
No 167
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=47.37 E-value=8.7 Score=31.63 Aligned_cols=42 Identities=21% Similarity=0.471 Sum_probs=35.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..|++.
T Consensus 64 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred HHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 345666777889999999998888888899999999998875
No 168
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=46.96 E-value=14 Score=29.48 Aligned_cols=43 Identities=30% Similarity=0.547 Sum_probs=36.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 49 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 3456667777889999999999888888899999999988765
No 169
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=46.91 E-value=15 Score=20.15 Aligned_cols=18 Identities=33% Similarity=0.375 Sum_probs=13.8
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 022605 75 QLLFMACRGDVKGVEDLL 92 (294)
Q Consensus 75 ~L~~Aa~~g~~~~v~~Ll 92 (294)
.+..||..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 467788888888888774
No 170
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=46.85 E-value=2.1 Score=36.51 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=34.3
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...........|+.|++++........+++++||+..|++.
T Consensus 53 ~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~ 93 (337)
T 1o6l_A 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF 93 (337)
T ss_dssp HHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred HHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 35556666778999999998888888899999999998874
No 171
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=46.67 E-value=11 Score=30.39 Aligned_cols=43 Identities=28% Similarity=0.494 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 65 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 3456667777778999999999888888899999999988764
No 172
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=46.22 E-value=7.9 Score=31.88 Aligned_cols=63 Identities=21% Similarity=0.385 Sum_probs=44.4
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+... .............+.......|++|++++.........++++||+..+++.
T Consensus 28 ~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 90 (311)
T 4agu_A 28 GQIVAIKKFLES-EDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLH 90 (311)
T ss_dssp CCEEEEEEECCC-CC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred CcEEEEEEeecc-ccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHH
Confidence 445556655422 233333344556777788889999999999988888899999999877553
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=46.17 E-value=6.2 Score=33.56 Aligned_cols=67 Identities=24% Similarity=0.407 Sum_probs=45.5
Q ss_pred ceeeee--ecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 202 SYQVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 202 ~l~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
..+.|. ..|...++|.+.................+.......|++|++++.........++++||+.
T Consensus 69 ~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 69 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC
Confidence 344454 2345556665543322223333445667778888899999999998888888999999996
No 174
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=45.42 E-value=9.4 Score=31.88 Aligned_cols=71 Identities=15% Similarity=0.231 Sum_probs=49.1
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+... .............+.......|++|++++..+......++++||+..+.+.
T Consensus 40 ~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~ 112 (331)
T 4aaa_A 40 MVMKCRNKDTGRIVAIKKFLES-DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112 (331)
T ss_dssp SEEEEEETTTCCEEEEEEEESC-SSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred EEEEEEECCCCceEEEEEEecC-CCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHH
Confidence 34555443 455566666432 233333344556777788889999999999988888899999999876554
No 175
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=45.41 E-value=12 Score=32.96 Aligned_cols=78 Identities=32% Similarity=0.474 Sum_probs=49.6
Q ss_pred hhhcccCCCC-CceeeeeecCch-hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 191 QVRKADGITK-GSYQVAKWNGTK-VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 191 ~~~~~~~~~~-t~l~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
.+...-+.|. ...+.|...+.. .++|.+. .... ........+.......|++|++++..+.. ...++++||+.
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~-~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECC-TTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEec-cCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 3333334443 445666665543 3445443 2111 12345567777888899999999977655 67899999999
Q ss_pred CCCCC
Q 022605 269 KVSMP 273 (294)
Q Consensus 269 ~g~l~ 273 (294)
.|+|.
T Consensus 262 ~gsL~ 266 (452)
T 1fmk_A 262 KGSLL 266 (452)
T ss_dssp TCBHH
T ss_pred CCCHH
Confidence 99875
No 176
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=45.10 E-value=1.9 Score=36.37 Aligned_cols=40 Identities=13% Similarity=0.346 Sum_probs=33.6
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........|++|++++........+++++||+..|++.
T Consensus 55 ~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~ 94 (318)
T 1fot_A 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF 94 (318)
T ss_dssp HHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHH
Confidence 4555666679999999999888888899999999998875
No 177
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=44.94 E-value=15 Score=30.52 Aligned_cols=60 Identities=28% Similarity=0.370 Sum_probs=42.5
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.-++|.+... ............+.......|++|++++.........++++||+..|+|.
T Consensus 62 ~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 121 (327)
T 2yfx_A 62 QVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLK 121 (327)
T ss_dssp EEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred eEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHH
Confidence 3455555311 22333334556677777789999999999888888899999999888775
No 178
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=44.41 E-value=12 Score=30.31 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|+|.
T Consensus 58 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 100 (289)
T 4fvq_A 58 SFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100 (289)
T ss_dssp HHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHH
Confidence 3445666777779999999999888888899999999988875
No 179
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=44.29 E-value=3.4 Score=35.36 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=32.0
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.... +|+.|++++........+++++||+..|++.
T Consensus 72 ~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~ 112 (353)
T 3txo_A 72 TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLM 112 (353)
T ss_dssp HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 344444444 7999999998888888899999999998874
No 180
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=44.28 E-value=4.4 Score=33.61 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=47.5
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .|..-++|.+.................+.......|++|++++.....+...++++||+..+++.
T Consensus 49 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 122 (309)
T 2h34_A 49 DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLA 122 (309)
T ss_dssp EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHH
T ss_pred eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHH
Confidence 3444543 34455566554332223333344456666777779999999998888888899999999887765
No 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=44.18 E-value=4.6 Score=36.05 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=43.7
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+.................+......+|++|++++.........++++||+..|++.
T Consensus 51 ~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 114 (484)
T 3nyv_A 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114 (484)
T ss_dssp CCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHH
Confidence 4455666553222111122233445666777779999999999888888899999999998874
No 182
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=44.17 E-value=9.3 Score=32.21 Aligned_cols=44 Identities=32% Similarity=0.521 Sum_probs=32.7
Q ss_pred hhhhhHHHHHHHc-CCCchhhhhhhhcCCC-CeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKA-RHPNVVQFVGAVTQNI-PMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~-~l~~~~e~~~~g~l~ 273 (294)
......+...... +|++|++++..+.... ..++++||+..|+|.
T Consensus 70 ~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~ 115 (359)
T 3vhe_A 70 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115 (359)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHH
T ss_pred HHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHH
Confidence 3445556665555 7899999998766543 489999999988875
No 183
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=43.29 E-value=15 Score=31.37 Aligned_cols=44 Identities=25% Similarity=0.594 Sum_probs=35.9
Q ss_pred hhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+...... +|++|++++..+......++++||+..|+|.
T Consensus 119 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~ 163 (382)
T 3tt0_A 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163 (382)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHH
Confidence 3445566666666 8999999999998888999999999998875
No 184
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=43.16 E-value=7.3 Score=33.27 Aligned_cols=67 Identities=21% Similarity=0.329 Sum_probs=45.4
Q ss_pred eeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|.. .|...++|.+....... ......+.......|++|++++.........++++||+..|++.
T Consensus 36 V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 36 ARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 344443 34455666654222111 22345666677789999999999888888899999999998874
No 185
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=43.06 E-value=4 Score=33.05 Aligned_cols=42 Identities=17% Similarity=0.403 Sum_probs=34.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..+++.
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (276)
T 2h6d_A 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF 99 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHH
Confidence 345666677778999999998888888899999999888764
No 186
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=43.04 E-value=11 Score=31.61 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=36.5
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
.....+.......|++|++++.........++++||+..|++..
T Consensus 51 ~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (323)
T 3tki_A 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94 (323)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGG
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHH
Confidence 34566777788899999999998888888899999999888753
No 187
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=43.04 E-value=7.1 Score=35.90 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=44.6
Q ss_pred cCchhhhHhhhccCCCC---hH----hhhhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 209 NGTKVWVKILDKESHKD---PE----RINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~---~~----~~~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.|..-.+|.+...+... .. ...++.....+..+. .|++|++++.....+...+++|||+.+++|.
T Consensus 258 fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~ 330 (569)
T 4azs_A 258 FGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLS 330 (569)
T ss_dssp ECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHH
T ss_pred ccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHH
Confidence 46666777776443221 11 112344566666665 6889999998888888999999999988875
No 188
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=42.22 E-value=13 Score=31.18 Aligned_cols=43 Identities=28% Similarity=0.512 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+...... +|++|++++.........++++||+..|+|.
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 137 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHH
Confidence 344566666666 8999999999888888999999999998875
No 189
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=42.02 E-value=2.4 Score=36.27 Aligned_cols=41 Identities=24% Similarity=0.306 Sum_probs=34.0
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..........+|+.|+++.........+++++||+..|++.
T Consensus 89 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~ 129 (350)
T 1rdq_E 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129 (350)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 34556666779999999998888888899999999998874
No 190
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=41.78 E-value=7.4 Score=34.44 Aligned_cols=80 Identities=30% Similarity=0.439 Sum_probs=50.0
Q ss_pred hhhhhcccCCCC-CceeeeeecC-chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEec
Q 022605 189 ELQVRKADGITK-GSYQVAKWNG-TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEY 266 (294)
Q Consensus 189 ~~~~~~~~~~~~-t~l~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~ 266 (294)
.+.+...-+.|. .-.+.|...+ ...+||.+. ... .........+.......|++|++++..+. ...+++++||
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~-~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTEEEEEEEEC-TTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred HeEEEEEcccCCceEEEEEEECCccEEEEEEec-CCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 344444444443 3455555543 334455543 211 12334556677777789999999987765 5678999999
Q ss_pred CCCCCCC
Q 022605 267 HAKVSMP 273 (294)
Q Consensus 267 ~~~g~l~ 273 (294)
+..|+|.
T Consensus 264 ~~~g~L~ 270 (454)
T 1qcf_A 264 MAKGSLL 270 (454)
T ss_dssp CTTCBHH
T ss_pred cCCCcHH
Confidence 9999875
No 191
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=41.61 E-value=10 Score=31.70 Aligned_cols=30 Identities=17% Similarity=0.134 Sum_probs=23.5
Q ss_pred CCchhhhhhhhcC-------------CCCeEEEEecCCCCCCC
Q 022605 244 HPNVVQFVGAVTQ-------------NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 244 ~~~iv~~L~~~~~-------------~~~l~~~~e~~~~g~l~ 273 (294)
|++|++++..... ...++++|||+..|++.
T Consensus 108 hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll 150 (336)
T 2vuw_A 108 PPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDL 150 (336)
T ss_dssp CHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEET
T ss_pred cHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccH
Confidence 6778888776654 67899999999988654
No 192
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=41.49 E-value=17 Score=30.23 Aligned_cols=67 Identities=28% Similarity=0.485 Sum_probs=44.0
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHH--cCCCchhhhhhhhcCCC----CeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK--ARHPNVVQFVGAVTQNI----PMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~--~~~~~iv~~L~~~~~~~----~l~~~~e~~~~g~l~ 273 (294)
...+.|...|..-++|.+... ..........+... ..|++|++++....... .+++++||+..|+|.
T Consensus 56 g~Vy~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 128 (342)
T 1b6c_B 56 GEVWRGKWRGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 128 (342)
T ss_dssp EEEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHH
T ss_pred cEEEEEEEcCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHH
Confidence 345666666766677765321 11222233344444 68999999998776554 789999999998875
No 193
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=41.25 E-value=13 Score=30.86 Aligned_cols=44 Identities=30% Similarity=0.538 Sum_probs=35.7
Q ss_pred hhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+...... +|++|++++..+......++++||+..|+|.
T Consensus 94 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 138 (333)
T 2i1m_A 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138 (333)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred HHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHH
Confidence 3445566666666 8999999999988888999999999988775
No 194
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=41.22 E-value=13 Score=32.39 Aligned_cols=69 Identities=16% Similarity=0.258 Sum_probs=44.4
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc------CCCCeEEEEecCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT------QNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~------~~~~l~~~~e~~~~g~l 272 (294)
-.+.|.. .|..-+||.+-. ..............+.+.....|++||+++.... ....++++|||+. |+|
T Consensus 69 ~V~~a~~~~t~~~vAiK~i~~-~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L 145 (398)
T 4b99_A 69 VVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDL 145 (398)
T ss_dssp EEEEEEETTTCCEEEEEEETT-TTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEH
T ss_pred EEEEEEECCCCCEEEEEEECc-cccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCH
Confidence 3455543 356666776642 2233333334456788888899999999987543 3356899999995 544
No 195
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=41.00 E-value=16 Score=30.13 Aligned_cols=68 Identities=34% Similarity=0.565 Sum_probs=43.2
Q ss_pred eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|...+ ...++.+. ...............+.......|++|++++.... ....++++||+..|++.
T Consensus 52 Vy~~~~~~-~~avk~~k-~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~ 119 (307)
T 3lb7_A 52 VYKGKWHG-DVAVKILK-VVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLY 119 (307)
T ss_dssp EEEEESSS-EEEEEECC-CSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHH
T ss_pred EEEEEECC-EEEEEEEe-cCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHH
Confidence 44444433 23444332 22233333445566777777789999999987654 55688999999988874
No 196
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=40.86 E-value=11 Score=32.35 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=32.2
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...... +|++||++......+..++++|||+..|++.
T Consensus 68 ~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~ 108 (361)
T 4f9c_A 68 AELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFL 108 (361)
T ss_dssp HHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHH
T ss_pred HHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHH
Confidence 344444444 7999999998888888999999999998875
No 197
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=40.71 E-value=15 Score=30.67 Aligned_cols=43 Identities=16% Similarity=0.380 Sum_probs=36.2
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++........+++++||+..|++.
T Consensus 47 ~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 47 LVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp HHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred HHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 3456677777889999999999888888899999999988764
No 198
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=40.70 E-value=14 Score=30.28 Aligned_cols=60 Identities=27% Similarity=0.588 Sum_probs=42.5
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.-++|.+... ............+.......|++|++++.........++++||+..|+|.
T Consensus 55 ~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 114 (314)
T 2ivs_A 55 TVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114 (314)
T ss_dssp EEEEEECCTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred eEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHH
Confidence 3445554321 22333344556667777779999999999888888899999999988775
No 199
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=40.57 E-value=12 Score=31.02 Aligned_cols=43 Identities=21% Similarity=0.492 Sum_probs=35.7
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+......+|++|++++.........++++||+..|+|.
T Consensus 74 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 116 (322)
T 1p4o_A 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK 116 (322)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHH
Confidence 3455666667779999999999888888899999999998875
No 200
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=40.52 E-value=11 Score=31.53 Aligned_cols=59 Identities=31% Similarity=0.425 Sum_probs=42.6
Q ss_pred hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 213 ~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.++|.+. . .............+.......|++|++++..+......++++||+..|+|.
T Consensus 80 vavK~~~-~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 138 (325)
T 3kul_A 80 VAIKALK-A-GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138 (325)
T ss_dssp EEEEEEC-T-TCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHH
T ss_pred EEEEecC-C-CCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHH
Confidence 4555543 1 123333345566777777789999999998888778899999999998875
No 201
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=40.18 E-value=2 Score=35.78 Aligned_cols=72 Identities=25% Similarity=0.366 Sum_probs=43.6
Q ss_pred ceeeee--ecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC----eEEEEecCCCCCCC
Q 022605 202 SYQVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP----MMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~----l~~~~e~~~~g~l~ 273 (294)
..+.|. ..|..-++|.+.................+.......|++|++++........ .++++||+..|+|.
T Consensus 27 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~ 104 (311)
T 3ork_A 27 EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLR 104 (311)
T ss_dssp EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHH
T ss_pred EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHH
Confidence 344444 2344556666643322333333344455555666689999999876544433 38999999887765
No 202
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=40.15 E-value=12 Score=32.10 Aligned_cols=69 Identities=17% Similarity=0.302 Sum_probs=47.3
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|.. .|...++|.+... ...........+.......|++|++++..+......++++||+..|+|.
T Consensus 104 ~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~ 174 (373)
T 2x4f_A 104 QVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174 (373)
T ss_dssp CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred EEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence 3455543 2445555655321 1222334556777777789999999999888888899999999998874
No 203
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=40.02 E-value=14 Score=30.82 Aligned_cols=43 Identities=21% Similarity=0.404 Sum_probs=36.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|+|.
T Consensus 60 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 102 (326)
T 2y0a_A 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102 (326)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHH
Confidence 3456777778889999999998888888899999999988875
No 204
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=39.98 E-value=12 Score=30.30 Aligned_cols=63 Identities=17% Similarity=0.313 Sum_probs=43.9
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+.... ............+.......|++|++++.........++++||+..|++.
T Consensus 31 ~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 93 (284)
T 3kk8_A 31 GLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 93 (284)
T ss_dssp CCEEEEEEEEGGG-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CceEEEEEeeccc-CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHH
Confidence 3444555553222 22333334456777778889999999999888888889999999988763
No 205
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=39.84 E-value=11 Score=34.15 Aligned_cols=79 Identities=33% Similarity=0.485 Sum_probs=49.8
Q ss_pred hhhhcccCCCC-CceeeeeecCch-hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecC
Q 022605 190 LQVRKADGITK-GSYQVAKWNGTK-VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYH 267 (294)
Q Consensus 190 ~~~~~~~~~~~-t~l~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~ 267 (294)
+.+...-+.|. .-.+.+...+.. .+||.+. .... ....+...+.+.....|++|++++..+.. ..+++++||+
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~-~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEEC-TTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeC-CCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 33333344443 345566655533 3445443 2211 12345667778888899999999977654 6789999999
Q ss_pred CCCCCC
Q 022605 268 AKVSMP 273 (294)
Q Consensus 268 ~~g~l~ 273 (294)
..|+|.
T Consensus 344 ~~gsL~ 349 (535)
T 2h8h_A 344 SKGSLL 349 (535)
T ss_dssp TTEEHH
T ss_pred cCCcHH
Confidence 998875
No 206
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=39.42 E-value=15 Score=30.11 Aligned_cols=44 Identities=27% Similarity=0.449 Sum_probs=35.6
Q ss_pred hhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+...... +|++|++++..+......++++||+..|+|.
T Consensus 71 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 115 (313)
T 1t46_A 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115 (313)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHH
T ss_pred HHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHH
Confidence 3445566666666 8999999999888888899999999888775
No 207
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=38.82 E-value=2.4 Score=36.87 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=35.4
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.+.....|++|++++........+++++||+..|+|.
T Consensus 62 ~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~ 103 (384)
T 4fr4_A 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103 (384)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHH
Confidence 345666777789999999998888888999999999988874
No 208
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=38.80 E-value=5.5 Score=33.23 Aligned_cols=69 Identities=26% Similarity=0.389 Sum_probs=42.5
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC----CCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN----IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~----~~l~~~~e~~~~g~l~ 273 (294)
...+.|...|...++|.+... ..........+.......|++|++++...... ...++++||+..|+|.
T Consensus 51 g~V~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 123 (337)
T 3mdy_A 51 GEVWMGKWRGEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLY 123 (337)
T ss_dssp EEEEEEEETTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHH
T ss_pred eEEEEEEECCceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHH
Confidence 345666667777777766321 11111111222222234899999999776555 5689999999998875
No 209
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=38.68 E-value=9 Score=33.93 Aligned_cols=44 Identities=14% Similarity=0.301 Sum_probs=37.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.+.....|++|++++.........++++||+..|++.
T Consensus 55 ~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~ 98 (444)
T 3soa_A 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98 (444)
T ss_dssp HHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHH
T ss_pred HHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHH
Confidence 34456777788889999999999888888899999999998874
No 210
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=38.48 E-value=4.1 Score=36.57 Aligned_cols=72 Identities=22% Similarity=0.420 Sum_probs=46.0
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|.. .|..-++|.+.................+.......|++|++++........+++++||+..|++.
T Consensus 31 ~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~ 104 (476)
T 2y94_A 31 KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELF 104 (476)
T ss_dssp CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHH
T ss_pred EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 3455543 35555666553221000011123345666667779999999999888888899999999888775
No 211
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=38.26 E-value=11 Score=31.36 Aligned_cols=44 Identities=20% Similarity=0.479 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
.....+.......|++|++++..+......++++||+..|++..
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 124 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGG
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHH
Confidence 34455666666789999999998888888999999999988753
No 212
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=38.10 E-value=11 Score=30.35 Aligned_cols=70 Identities=21% Similarity=0.375 Sum_probs=44.8
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh--cCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV--TQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~--~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|... |..-++|.+. ...............+.......|++|++++..+ ......++++||+..|+|.
T Consensus 22 V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (279)
T 2w5a_A 22 CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLA 95 (279)
T ss_dssp EEEEEETTTCCEEEEEEEE-CTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHH
T ss_pred EEEEEECCCCcEEEEEEEE-cccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHH
Confidence 4444432 3444555553 2222333334556677778888999999998755 3456789999999888764
No 213
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=37.84 E-value=4.2 Score=37.58 Aligned_cols=41 Identities=22% Similarity=0.185 Sum_probs=35.3
Q ss_pred hhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 233 THELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 233 ~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.....|++|++++........+++++||+.+|+|.
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~ 272 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 272 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 45667777889999999998888888899999999999875
No 214
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=37.14 E-value=7.2 Score=34.95 Aligned_cols=71 Identities=14% Similarity=0.195 Sum_probs=45.6
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+.... ............+.......|++|++++..+......++++||+..|++.
T Consensus 52 ~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~ 124 (494)
T 3lij_A 52 EVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124 (494)
T ss_dssp EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEEEEEECCCCcEEEEEEEeccc-cCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHH
Confidence 34444433 3344556554221 11111233445667777779999999999988888899999999999874
No 215
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=36.91 E-value=10 Score=30.56 Aligned_cols=59 Identities=22% Similarity=0.482 Sum_probs=38.8
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHA 268 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~ 268 (294)
|...++|.+.................+.......|++|++++.........++++||+.
T Consensus 38 ~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 96 (275)
T 2eue_A 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG 96 (275)
T ss_dssp CCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCC
T ss_pred CCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhcC
Confidence 44555665543222222223344566777778899999999998888888999999983
No 216
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=36.55 E-value=4 Score=34.80 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=28.7
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+|+.|++++........+++++||+..|+|.
T Consensus 75 ~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~ 106 (345)
T 1xjd_A 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM 106 (345)
T ss_dssp TTCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred CCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 48999999998888888899999999999874
No 217
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=36.44 E-value=13 Score=31.09 Aligned_cols=42 Identities=24% Similarity=0.375 Sum_probs=33.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.+.....|++|++++........+++++||+..|++.
T Consensus 68 ~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 109 (327)
T 3a62_A 68 TKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF 109 (327)
T ss_dssp ---HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHH
T ss_pred HHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHH
Confidence 345666777889999999998888888999999999888764
No 218
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=36.12 E-value=4.7 Score=36.95 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=35.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.....|+.|+++.........+++++||+..|+|.
T Consensus 232 ~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~ 273 (543)
T 3c4z_A 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR 273 (543)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred HHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHH
Confidence 345666777889999999998888888899999999999874
No 219
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=35.47 E-value=15 Score=29.88 Aligned_cols=43 Identities=19% Similarity=0.341 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..|++.
T Consensus 66 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 108 (285)
T 3is5_A 66 QIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELL 108 (285)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHH
T ss_pred HHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHH
Confidence 3445666777779999999999888888899999999998875
No 220
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=35.39 E-value=13 Score=31.46 Aligned_cols=70 Identities=21% Similarity=0.261 Sum_probs=45.9
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+... ............+......+|++|++++.....+...++++||+..|+|.
T Consensus 48 ~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 119 (360)
T 3eqc_A 48 VVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 119 (360)
T ss_dssp EEEEEEETTTCCEEEEEEEECC--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred EEEEEEECCCCcEEEEEEeccc--cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHH
Confidence 34455444 444455544321 22333334445556666678999999998888888899999999988875
No 221
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=35.21 E-value=31 Score=27.71 Aligned_cols=44 Identities=25% Similarity=0.431 Sum_probs=34.2
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......+.......|++|++++...... ...+++||+..|++.
T Consensus 65 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~ 108 (291)
T 1u46_A 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLL 108 (291)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHhCCCCCcccEEEEEccC-CceeeEecccCCCHH
Confidence 34455677777788999999999776544 588999999988765
No 222
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=34.98 E-value=7.6 Score=31.72 Aligned_cols=66 Identities=27% Similarity=0.471 Sum_probs=39.2
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHH--cCCCchhhhhhhhcCCC----CeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK--ARHPNVVQFVGAVTQNI----PMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~--~~~~~iv~~L~~~~~~~----~l~~~~e~~~~g~l~ 273 (294)
..+.|...|..-++|.+... . .........+... ..|++|++++....... .+++++||+..|+|.
T Consensus 18 ~V~~~~~~~~~vavK~~~~~---~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 89 (303)
T 3gxj_A 18 EVWRGKWRGEEVAVKIFSSR---E---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 89 (303)
T ss_dssp EEEEC-CTTSCEEEEECC-T---T---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHH
T ss_pred EEEEEEEcCcceEEEEeccc---c---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHH
Confidence 34556556666666665311 1 1112222223322 68999999997765554 689999999999875
No 223
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=34.93 E-value=13 Score=31.79 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=35.4
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.+.....|++|++++........+++++||+..|+|.
T Consensus 62 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~ 103 (361)
T 2yab_A 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELF 103 (361)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHH
Confidence 445666777778999999999888888899999999988875
No 224
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=34.87 E-value=18 Score=29.75 Aligned_cols=61 Identities=18% Similarity=0.228 Sum_probs=40.8
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHH-cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEK-ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~-~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+..... .........+....+ .+|++|++++.........++++||+..|++.
T Consensus 38 ~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (316)
T 2ac3_A 38 SQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99 (316)
T ss_dssp CCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred CcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence 44556665532211 112233345555555 58999999999888888899999999988764
No 225
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=34.85 E-value=20 Score=30.40 Aligned_cols=70 Identities=21% Similarity=0.339 Sum_probs=47.3
Q ss_pred ceeeee--ecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|. ..|..-++|.+..... ..........+.......|++|++++........+++++||+..|++.
T Consensus 25 ~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~ 96 (347)
T 3zgw_A 25 KVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96 (347)
T ss_dssp EEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred EEEEEEECCCCCEEEEEEEEcccc--chHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHH
Confidence 344554 2455566666542221 111233456677777889999999999888888899999999998875
No 226
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=34.48 E-value=20 Score=29.53 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=41.1
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSM 272 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l 272 (294)
..+.|... |..-+||.+.........................|++|++++..+.....+++++||+ .+++
T Consensus 72 ~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L 143 (311)
T 3p1a_A 72 EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL 143 (311)
T ss_dssp EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCH
Confidence 34445443 4555666554222221222222223333344458999999999888888899999999 4443
No 227
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=34.46 E-value=16 Score=29.28 Aligned_cols=42 Identities=21% Similarity=0.463 Sum_probs=35.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..+++.
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (277)
T 3f3z_A 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF 94 (277)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHH
Confidence 445666777779999999999888888899999999888774
No 228
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=34.36 E-value=19 Score=30.14 Aligned_cols=44 Identities=27% Similarity=0.497 Sum_probs=36.7
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++.........++++||+..|++.
T Consensus 91 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 134 (333)
T 1mqb_A 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134 (333)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHH
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHH
Confidence 34556677777889999999999888888899999999888764
No 229
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=34.01 E-value=21 Score=29.40 Aligned_cols=42 Identities=17% Similarity=0.328 Sum_probs=32.8
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCC--CeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNI--PMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~--~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++....... ..++++||+..|++.
T Consensus 54 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 97 (319)
T 4euu_A 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY 97 (319)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHH
T ss_pred HHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHH
Confidence 346677778889999999987654433 678999999988874
No 230
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=33.82 E-value=1.2e+02 Score=26.56 Aligned_cols=49 Identities=22% Similarity=0.311 Sum_probs=32.6
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCC--------------CCCCcHHHHHHHcCcHHHHHHHHh
Q 022605 78 FMACRGDVKGVEDLLNEGSDVNSID--------------LDGRTALHIAACEGHVEVVKLLLS 126 (294)
Q Consensus 78 ~Aa~~g~~~~v~~Ll~~g~~~~~~~--------------~~g~TpLh~A~~~g~~~~v~~Ll~ 126 (294)
..+..|+...|+..+..|.|++.+= .-|.|.+|+|+...+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3445799999999999988866431 235566666666666666665554
No 231
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=33.53 E-value=17 Score=32.59 Aligned_cols=43 Identities=14% Similarity=0.343 Sum_probs=36.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.+.....|++|++++.........++++||+..|++.
T Consensus 92 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~ 134 (504)
T 3q5i_A 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF 134 (504)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHH
Confidence 3446677777789999999999988888899999999998874
No 232
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=33.48 E-value=18 Score=29.49 Aligned_cols=69 Identities=20% Similarity=0.384 Sum_probs=44.3
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+... ...........+.......|++|++++.....+...++++||+..+++.
T Consensus 34 ~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 104 (302)
T 2j7t_A 34 KVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD 104 (302)
T ss_dssp CEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred EEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence 44555544 344445544321 1112233445667777889999999999888888999999999888764
No 233
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=33.20 E-value=27 Score=28.14 Aligned_cols=61 Identities=20% Similarity=0.382 Sum_probs=41.8
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
+...++|.+... ............+.......|++|++++... .....++++||+..+++.
T Consensus 37 ~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~ 97 (287)
T 1u59_A 37 QIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLH 97 (287)
T ss_dssp CEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHH
T ss_pred cceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHH
Confidence 334455555321 2333344455677778888999999999877 456789999999888764
No 234
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=33.14 E-value=14 Score=30.05 Aligned_cols=68 Identities=29% Similarity=0.556 Sum_probs=43.3
Q ss_pred eeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|...+ ..+++.+. ...............+.......|++|++++.. ......++++||+..+++.
T Consensus 40 Vy~~~~~~-~vavK~~~-~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~~~lv~e~~~~~~L~ 107 (289)
T 3og7_A 40 VYKGKWHG-DVAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLY 107 (289)
T ss_dssp EEEEESSS-EEEEEEES-CSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-ECSSSCEEEEECCCEEEHH
T ss_pred EEEEEEcC-ceEEEEEe-ccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEee-ccCCccEEEEEecCCCcHH
Confidence 34443333 34455443 222333334455667777778899999998874 4556789999999887763
No 235
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=33.12 E-value=12 Score=31.17 Aligned_cols=64 Identities=22% Similarity=0.340 Sum_probs=40.3
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
|..-++|.+...... ..........+...... .|+.|++++.........++++||+..|++..
T Consensus 54 ~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 118 (327)
T 3lm5_A 54 GQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFS 118 (327)
T ss_dssp CCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGG
T ss_pred CCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHH
Confidence 455566655432211 11112233344444444 66999999988888888999999999887753
No 236
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=33.04 E-value=1.2e+02 Score=26.49 Aligned_cols=49 Identities=18% Similarity=0.172 Sum_probs=39.6
Q ss_pred HHcCcHHHHHHHHhCCCCCCCC--------------CCCCCCHHHHHHHcCCHHHHHHHHHCC
Q 022605 113 ACEGHVEVVKLLLSKKANIDAR--------------DRWGSTAAADAKYYGNVEVYNILKARG 161 (294)
Q Consensus 113 ~~~g~~~~v~~Ll~~gad~~~~--------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g 161 (294)
+..|+...|+.-+..|.|++.. -..|.|-+|+|++..+.+++..|+.-+
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 3568889999888888777432 236899999999999999999999743
No 237
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=32.67 E-value=4.9 Score=33.28 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=32.1
Q ss_pred hHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.......|++|++++.........++++||+..+++.
T Consensus 78 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~ 117 (319)
T 2y4i_B 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 117 (319)
T ss_dssp TTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHH
T ss_pred HHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHH
Confidence 4444555668999999999988888899999999877664
No 238
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=31.87 E-value=23 Score=28.41 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..+++.
T Consensus 54 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (283)
T 3bhy_A 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 96 (283)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred HHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHH
Confidence 3456667777889999999998888888899999999888775
No 239
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=31.85 E-value=20 Score=30.91 Aligned_cols=43 Identities=19% Similarity=0.457 Sum_probs=36.0
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++........+++++||+..|+|.
T Consensus 94 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~ 136 (387)
T 1kob_A 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF 136 (387)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred HHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHH
Confidence 3456667777779999999999888888899999999998874
No 240
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=31.76 E-value=22 Score=29.19 Aligned_cols=51 Identities=18% Similarity=0.178 Sum_probs=29.6
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhh
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAV 254 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~ 254 (294)
..+.|... |..-++|.+.... ...........+.......|++|++++...
T Consensus 21 ~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 73 (332)
T 3qd2_B 21 VVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAW 73 (332)
T ss_dssp EEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34555443 4455666553221 222233455667777777999999988654
No 241
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=31.39 E-value=3.3 Score=33.65 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.8
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..+++.
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 99 (278)
T 3cok_A 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMN 99 (278)
T ss_dssp HHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHH
T ss_pred HHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHH
Confidence 345566666778999999998888888899999999887654
No 242
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=31.06 E-value=22 Score=28.97 Aligned_cols=70 Identities=21% Similarity=0.329 Sum_probs=46.5
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .|...++|.+-.... ..........+......+|++|++++.........++++||+..+++.
T Consensus 37 ~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 108 (303)
T 3a7i_A 37 EVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL 108 (303)
T ss_dssp EEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred EEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHH
Confidence 3445543 244455665532211 122234556677778889999999999888888899999999887764
No 243
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=30.94 E-value=22 Score=29.33 Aligned_cols=43 Identities=16% Similarity=0.300 Sum_probs=36.1
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..+++.
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (321)
T 2a2a_A 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELF 103 (321)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHH
Confidence 3456677777889999999998888888899999999888875
No 244
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=30.75 E-value=3.3 Score=33.67 Aligned_cols=42 Identities=24% Similarity=0.472 Sum_probs=33.9
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..|++.
T Consensus 56 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 97 (279)
T 3fdn_A 56 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97 (279)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred HHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHH
Confidence 345556666678999999999888888899999999887764
No 245
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=30.59 E-value=10 Score=30.55 Aligned_cols=68 Identities=32% Similarity=0.533 Sum_probs=44.3
Q ss_pred CceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC-CCCeEEEEecCCCCCCC
Q 022605 201 GSYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ-NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 201 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~-~~~l~~~~e~~~~g~l~ 273 (294)
...+.|...|...++|.+.... ........+.......|++|++++..... ....++++||+..|++.
T Consensus 35 g~V~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 35 GDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp CEEEEEEETTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred ceEEEEEEcCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 3456666667766776653211 12234455666677789999999987543 34689999999988764
No 246
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=30.43 E-value=14 Score=31.38 Aligned_cols=72 Identities=19% Similarity=0.348 Sum_probs=46.4
Q ss_pred ceeeeeec--CchhhhHhhhccCCC-ChHh----hhhhhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHK-DPER----INAFTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~-~~~~----~~~~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...+||.+-..... .... .......+.+.... +|++|++++.........++++||+..+++.
T Consensus 109 ~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~ 188 (365)
T 2y7j_A 109 VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188 (365)
T ss_dssp EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHH
T ss_pred EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHH
Confidence 45666543 556667765422211 1111 12234555566665 8999999998888888899999999998875
No 247
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=30.42 E-value=26 Score=28.52 Aligned_cols=44 Identities=25% Similarity=0.387 Sum_probs=34.4
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcC--CCCeEEEEecCCCCCCCc
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~--~~~l~~~~e~~~~g~l~~ 274 (294)
.....+.......|++|++++..... ...+++++||+..|++..
T Consensus 82 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~ 127 (298)
T 2zv2_A 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME 127 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCC
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHH
Confidence 34566777777899999999987654 456899999999888764
No 248
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=30.35 E-value=33 Score=27.77 Aligned_cols=47 Identities=23% Similarity=0.410 Sum_probs=35.6
Q ss_pred HhhhhhhhHHHHHHHcCCCchhhhhhhh-cCCCCeEEEEecCCCCCCC
Q 022605 227 ERINAFTHELTIVEKARHPNVVQFVGAV-TQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 227 ~~~~~~~t~l~~a~~~~~~~iv~~L~~~-~~~~~l~~~~e~~~~g~l~ 273 (294)
.........+.......|++|++++..+ ..+...++++||+..|++.
T Consensus 68 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 115 (298)
T 3f66_A 68 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115 (298)
T ss_dssp HHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHH
Confidence 3334455677777788999999999874 4455678999999998874
No 249
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=30.10 E-value=19 Score=28.76 Aligned_cols=70 Identities=26% Similarity=0.268 Sum_probs=45.6
Q ss_pred ceeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|... |...++|.+...... .........+.......|++|++++.........++++||+..+++.
T Consensus 22 ~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (276)
T 2yex_A 22 EVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93 (276)
T ss_dssp EEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGG
T ss_pred EEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHH
Confidence 34455433 444555555322211 12233445666677779999999998888778889999999887765
No 250
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=30.07 E-value=34 Score=27.49 Aligned_cols=70 Identities=19% Similarity=0.291 Sum_probs=42.6
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhh----hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERI----NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~----~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|.. .+..-++|.+........... ......+.......|++|++++....... ++++||+..|++.
T Consensus 34 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~ 109 (287)
T 4f0f_A 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLY 109 (287)
T ss_dssp CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHH
T ss_pred eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHH
Confidence 4455544 345556666543222211111 33445666677778999999997665433 6899999988773
No 251
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=30.03 E-value=18 Score=29.34 Aligned_cols=61 Identities=28% Similarity=0.480 Sum_probs=40.9
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc--CCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT--QNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~--~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+. .............+.......|++|++++..+. ....+++++||+..|++.
T Consensus 39 ~~~vavK~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 101 (295)
T 3ugc_A 39 GEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101 (295)
T ss_dssp CEEEEEEEES---CCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHH
T ss_pred CcEEEEEEcc---cCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHH
Confidence 4445555543 122333344556777778889999999987653 234588999999998875
No 252
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=30.02 E-value=45 Score=27.18 Aligned_cols=60 Identities=22% Similarity=0.371 Sum_probs=38.2
Q ss_pred hhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC-----CeEEEEecCCCCCCC
Q 022605 213 VWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI-----PMMIVLEYHAKVSMP 273 (294)
Q Consensus 213 ~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~-----~l~~~~e~~~~g~l~ 273 (294)
-++|.+. ...............+.......|++|++++..+.... ..++++||+..|++.
T Consensus 65 vavK~~~-~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~ 129 (313)
T 3brb_A 65 VAVKTMK-LDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLH 129 (313)
T ss_dssp EEEEEC----CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHH
T ss_pred EEEEEEe-ccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHH
Confidence 4455543 22223333344556777777789999999997765433 458999999988875
No 253
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=29.51 E-value=14 Score=30.50 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=44.5
Q ss_pred eeeee--ecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc----CCCCeEEEEecCCCCCCC
Q 022605 203 YQVAK--WNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT----QNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~----~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|. ..|..-++|.+.. ............+.......|++|++++.... .....++++||+..|+|.
T Consensus 45 V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 118 (317)
T 2buj_A 45 VDLVEGLHDGHFYALKRILC---HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLW 118 (317)
T ss_dssp EEEEEETTTCCEEEEEEEEE---SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHH
T ss_pred EEEEEecCCCcEEEEEEEec---CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHH
Confidence 44444 3455556665532 22233344556677777789999999987664 344678999999998874
No 254
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=29.23 E-value=11 Score=30.57 Aligned_cols=70 Identities=20% Similarity=0.259 Sum_probs=45.3
Q ss_pred eeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|.. .|...++|.+...... ..........+......+|++|++++.........++++|++..+++.
T Consensus 38 V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 109 (287)
T 2wei_A 38 VLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109 (287)
T ss_dssp EEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred EEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHH
Confidence 444443 2444555655322211 111233445666777779999999998888888899999999888763
No 255
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=29.23 E-value=29 Score=28.87 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=31.9
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...... +|++|++++.........++++||+..|++.
T Consensus 54 ~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 54 KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 344444444 5999999999888888899999999988874
No 256
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=29.16 E-value=24 Score=31.32 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=36.1
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.+.....|++|++++.........++++||+..|++.
T Consensus 68 ~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 109 (486)
T 3mwu_A 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109 (486)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHH
Confidence 446677778889999999999888888899999999998874
No 257
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=28.90 E-value=30 Score=28.51 Aligned_cols=66 Identities=21% Similarity=0.342 Sum_probs=41.7
Q ss_pred eeeeee-cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCC
Q 022605 203 YQVAKW-NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAK 269 (294)
Q Consensus 203 l~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~ 269 (294)
.+.|.. .|..-++|.+... .............+.......|++|++++........+++++||+..
T Consensus 37 V~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 103 (311)
T 3niz_A 37 VYKAKDSQGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK 103 (311)
T ss_dssp EEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE
T ss_pred EEEEEECCCCEEEEEEEecc-cccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC
Confidence 444443 3444555655322 12222223344667777788999999999988888889999999974
No 258
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=28.90 E-value=2.8 Score=37.13 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=30.3
Q ss_pred HHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 236 LTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 236 l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
........|++|++++..+.....+++++||+..|+|.
T Consensus 199 ~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~ 236 (446)
T 4ejn_A 199 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 236 (446)
T ss_dssp --CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHH
T ss_pred HHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHH
Confidence 33444557999999998888888899999999998874
No 259
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=28.82 E-value=12 Score=30.50 Aligned_cols=66 Identities=21% Similarity=0.401 Sum_probs=40.5
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHH--cCCCchhhhhhhhcC----CCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEK--ARHPNVVQFVGAVTQ----NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~--~~~~~iv~~L~~~~~----~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|...|...++|.+... ..........+... ..|++|++++..... ...+++++||+..|+|.
T Consensus 23 ~V~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 94 (301)
T 3q4u_A 23 EVWRGSWQGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLY 94 (301)
T ss_dssp EEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHH
T ss_pred EEEEEEECCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHH
Confidence 45666666777777765321 11111222233333 689999999876322 34578999999998875
No 260
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=28.72 E-value=16 Score=30.34 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=46.8
Q ss_pred ceeeeee--cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 202 SYQVAKW--NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 202 ~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
..+.|.. .|...+||.+-..... ........+.......|++|++++.........++++||+..|++..
T Consensus 60 ~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 131 (321)
T 2c30_A 60 IVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131 (321)
T ss_dssp EEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHH
T ss_pred EEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHH
Confidence 3455543 3555566655322111 12234456666777799999999988888888999999999988753
No 261
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=28.71 E-value=4 Score=33.26 Aligned_cols=42 Identities=19% Similarity=0.431 Sum_probs=34.5
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..|++.
T Consensus 61 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 102 (284)
T 2vgo_A 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY 102 (284)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred HHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHH
Confidence 345666677778999999998888888899999999888764
No 262
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=28.33 E-value=25 Score=29.12 Aligned_cols=61 Identities=23% Similarity=0.398 Sum_probs=40.8
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhc--CCCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVT--QNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~--~~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+.. ............+.......|++|++++.... .....++++||+..|++.
T Consensus 52 ~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 114 (327)
T 3lxl_A 52 GALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114 (327)
T ss_dssp SEEEEEEEESS---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHH
T ss_pred ceEEEEEEecc---CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHH
Confidence 44455555431 22333344556777777889999999987654 344588999999998875
No 263
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=28.16 E-value=17 Score=30.05 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=34.7
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++..+......++++||+..|++.
T Consensus 74 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 115 (326)
T 3uim_A 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115 (326)
T ss_dssp HHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHH
T ss_pred HHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHH
Confidence 345566666778999999999888888899999999998875
No 264
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=28.05 E-value=13 Score=34.53 Aligned_cols=60 Identities=23% Similarity=0.393 Sum_probs=42.0
Q ss_pred hhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 212 KVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 212 ~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+||.+. ...............+.+.....|++||+++..+. ....++++||+..|+|.
T Consensus 398 ~vAvK~~~-~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~ 457 (635)
T 4fl3_A 398 TVAVKILK-NEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLN 457 (635)
T ss_dssp EEEEEEEC-GGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHH
T ss_pred EEEEEEec-cccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCCHH
Confidence 34566553 22222333345667778888889999999998775 45688999999988875
No 265
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=27.89 E-value=23 Score=29.26 Aligned_cols=62 Identities=23% Similarity=0.457 Sum_probs=42.6
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcC--CCCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQ--NIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~--~~~l~~~~e~~~~g~l~ 273 (294)
|..-++|.+... ............+.......|++|++++..... ...+++++||+..|++.
T Consensus 60 ~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (318)
T 3lxp_A 60 GEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123 (318)
T ss_dssp CEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHH
T ss_pred CcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHH
Confidence 444556655422 223333445677778888899999999987654 35678999999988875
No 266
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=27.71 E-value=19 Score=30.36 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=28.3
Q ss_pred cCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 242 ARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 242 ~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+|++|++++.........++++||+..|++.
T Consensus 73 ~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 104 (342)
T 2qr7_A 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104 (342)
T ss_dssp TTSTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred cCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 47999999999888888899999999988864
No 267
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=27.15 E-value=17 Score=30.65 Aligned_cols=42 Identities=17% Similarity=0.306 Sum_probs=33.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++..+......++++||+..|++.
T Consensus 95 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp ----CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 345666777789999999998888888899999999988874
No 268
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=26.68 E-value=17 Score=30.23 Aligned_cols=42 Identities=26% Similarity=0.532 Sum_probs=34.1
Q ss_pred hhhHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+...... +|++|++++.........++++||+..|+|.
T Consensus 72 ~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 114 (327)
T 1fvr_A 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114 (327)
T ss_dssp HHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred HHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHH
Confidence 34555556666 8999999999888888899999999998875
No 269
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=26.50 E-value=36 Score=27.32 Aligned_cols=43 Identities=21% Similarity=0.484 Sum_probs=33.2
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++... .+...++++||+..|++.
T Consensus 61 ~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~ 103 (281)
T 1mp8_A 61 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 103 (281)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTTEEHH
T ss_pred HHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCCCCHH
Confidence 4455666777777999999999776 455788999999887764
No 270
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=25.99 E-value=30 Score=28.16 Aligned_cols=42 Identities=14% Similarity=0.307 Sum_probs=35.2
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++.........++++||+..+++.
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF 94 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred HHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHH
Confidence 445667777889999999998888888899999999988874
No 271
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=25.30 E-value=19 Score=30.94 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=28.9
Q ss_pred HcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 241 KARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 241 ~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+|+.|++++........+++++||+..|++.
T Consensus 95 ~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~ 127 (373)
T 2r5t_A 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELF 127 (373)
T ss_dssp CCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred hCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 358999999998888888999999999998874
No 272
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=24.95 E-value=25 Score=31.91 Aligned_cols=72 Identities=10% Similarity=-0.057 Sum_probs=46.1
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhh-----hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERI-----NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~-----~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
-.+.|...+...+++............. ......+.+..+..|++|+.+..........+++|||+..++|.
T Consensus 351 ~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~ 427 (540)
T 3en9_A 351 DIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAK 427 (540)
T ss_dssp EEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHH
T ss_pred EEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHH
Confidence 3455555666666666554332222221 22457777888889999995544444566779999999988875
No 273
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=24.91 E-value=26 Score=30.12 Aligned_cols=69 Identities=14% Similarity=0.273 Sum_probs=42.8
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCC--CeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNI--PMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~--~l~~~~e~~~~g~l~ 273 (294)
.+.|... |..-++|.+..... ..........+.......|++|++++....... ..++++||+..|++.
T Consensus 25 Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~ 97 (396)
T 4eut_A 25 VFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY 97 (396)
T ss_dssp EEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHH
T ss_pred EEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHH
Confidence 4444433 44555665532111 111223345677778889999999997665433 678999999988765
No 274
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=24.76 E-value=4.2 Score=34.50 Aligned_cols=41 Identities=20% Similarity=0.468 Sum_probs=32.8
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
....+.......|++|++++........+++++||+ .|++.
T Consensus 56 ~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~ 96 (336)
T 3h4j_B 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELF 96 (336)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHH
Confidence 345666677779999999999888888899999998 56543
No 275
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=24.53 E-value=41 Score=27.15 Aligned_cols=40 Identities=25% Similarity=0.430 Sum_probs=31.9
Q ss_pred hHHHHHHHc-CCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 234 HELTIVEKA-RHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 234 t~l~~a~~~-~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+...... +|++|++++.....+...++++||+..+++.
T Consensus 72 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (298)
T 1phk_A 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF 112 (298)
T ss_dssp HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred HHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHH
Confidence 444444444 6999999998888888899999999988774
No 276
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=24.48 E-value=63 Score=25.74 Aligned_cols=44 Identities=23% Similarity=0.468 Sum_probs=33.5
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......+.......|++|++++.... +...++++||+..+++.
T Consensus 57 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 100 (281)
T 3cc6_A 57 KEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELG 100 (281)
T ss_dssp HHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCEEEEecCCCCCHH
Confidence 344556667777779999999997754 45678999999988774
No 277
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=24.33 E-value=14 Score=34.72 Aligned_cols=71 Identities=27% Similarity=0.221 Sum_probs=45.1
Q ss_pred ceeeeee---cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCC-----eEEEEecCCCCCCC
Q 022605 202 SYQVAKW---NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIP-----MMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~-----l~~~~e~~~~g~l~ 273 (294)
-.+.|.. .|...++|.+... ....................|++|++++..+..... .+++|||+.++++.
T Consensus 95 ~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~ 172 (681)
T 2pzi_A 95 WIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK 172 (681)
T ss_dssp EEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC
T ss_pred EEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHH
Confidence 3455543 2455566766432 223333344455666667789999999977654444 69999999988876
Q ss_pred c
Q 022605 274 I 274 (294)
Q Consensus 274 ~ 274 (294)
.
T Consensus 173 ~ 173 (681)
T 2pzi_A 173 R 173 (681)
T ss_dssp -
T ss_pred H
Confidence 3
No 278
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=24.14 E-value=19 Score=29.66 Aligned_cols=44 Identities=20% Similarity=0.425 Sum_probs=32.3
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCe------EEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPM------MIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l------~~~~e~~~~g~l~ 273 (294)
......+.......|++|++++......... ++++||+..|++.
T Consensus 70 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~ 119 (323)
T 3qup_A 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119 (323)
T ss_dssp HHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHH
Confidence 4455666777777999999999776555443 8999999998875
No 279
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=23.89 E-value=14 Score=29.97 Aligned_cols=61 Identities=25% Similarity=0.415 Sum_probs=39.8
Q ss_pred chhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 211 TKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 211 ~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
...++|.+... .............+.......|++|++++... .....++++||+..+++.
T Consensus 45 ~~vavK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~ 105 (291)
T 1xbb_A 45 KTVAVKILKNE-ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLN 105 (291)
T ss_dssp EEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHH
T ss_pred eeEEEEeeccc-ccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHH
Confidence 33455555322 22222234455677777778999999999877 566789999999888764
No 280
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=23.71 E-value=22 Score=29.07 Aligned_cols=66 Identities=27% Similarity=0.425 Sum_probs=44.3
Q ss_pred eeeeeec--CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 203 YQVAKWN--GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 203 l~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.+.|... |..-++|.+.... . .......+......+|++|++++.....+...++++||+..|++.
T Consensus 45 Vy~~~~~~~~~~vaiK~~~~~~-~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 45 VYKAIHKETGQIVAIKQVPVES-D----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEEEEETTTCCEEEEEEEETTS-C----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred EEEEEECCCCCEEEEEecCchH-H----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 4444443 4455555553211 1 123345666777779999999998888888899999999887764
No 281
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=23.65 E-value=37 Score=27.45 Aligned_cols=63 Identities=27% Similarity=0.455 Sum_probs=40.2
Q ss_pred cCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC--CCeEEEEecCCCCCCC
Q 022605 209 NGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~--~~l~~~~e~~~~g~l~ 273 (294)
.|..-++|.+.... ...........+.......|++|++++...... ..+++++||+..|++.
T Consensus 49 ~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 113 (302)
T 4e5w_A 49 TGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLK 113 (302)
T ss_dssp CSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHH
T ss_pred cCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHH
Confidence 34455566554221 111123345667777778999999998777655 5689999999988875
No 282
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=23.62 E-value=16 Score=30.43 Aligned_cols=68 Identities=16% Similarity=0.229 Sum_probs=39.0
Q ss_pred ceeeeeecCchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhh-----hcCCCCeEEEEecCCCCCCC
Q 022605 202 SYQVAKWNGTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGA-----VTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 202 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~-----~~~~~~l~~~~e~~~~g~l~ 273 (294)
..+.|...|...++|.+.... .........+.......|++|++++.. .......++++||+..|+|.
T Consensus 28 ~Vy~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 100 (336)
T 3g2f_A 28 AVYKGSLDERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLX 100 (336)
T ss_dssp EEEEEEETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHH
T ss_pred EEEEEEECCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHH
Confidence 456666666666777653111 111111122222234689999999852 22233568999999999875
No 283
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=23.48 E-value=30 Score=31.99 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=34.8
Q ss_pred hhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 230 NAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 230 ~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
......+.+.....|++||+++..+.. ..+++++||+..|+|.
T Consensus 381 ~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~ 423 (613)
T 2ozo_A 381 EEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLH 423 (613)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHH
Confidence 345567777777899999999987764 5799999999999875
No 284
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=23.19 E-value=57 Score=26.17 Aligned_cols=45 Identities=22% Similarity=0.422 Sum_probs=34.4
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCCCCe-EEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPM-MIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l-~~~~e~~~~g~l~ 273 (294)
.......+.......|++|++++......... ++++||+..|++.
T Consensus 66 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~ 111 (298)
T 3pls_A 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLL 111 (298)
T ss_dssp HHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHH
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHH
Confidence 34455667777778999999999887655554 8999999888765
No 285
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=23.18 E-value=20 Score=29.03 Aligned_cols=43 Identities=23% Similarity=0.424 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 231 AFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 231 ~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.....+.......|++|++++.........++++||+..+++.
T Consensus 65 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 65 PLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred HHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 3455666777779999999999888888899999999877664
No 286
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=22.57 E-value=62 Score=30.13 Aligned_cols=44 Identities=23% Similarity=0.474 Sum_probs=35.2
Q ss_pred hhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCC
Q 022605 229 INAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMP 273 (294)
Q Consensus 229 ~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~ 273 (294)
.......+.......|++|++++.... +...++++||+..|+|.
T Consensus 435 ~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~ 478 (656)
T 2j0j_A 435 REKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELR 478 (656)
T ss_dssp HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHH
Confidence 345566777788889999999997764 55789999999988875
No 287
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=22.00 E-value=43 Score=27.62 Aligned_cols=61 Identities=26% Similarity=0.454 Sum_probs=39.9
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCC--CCeEEEEecCCCCCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQN--IPMMIVLEYHAKVSMP 273 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~--~~l~~~~e~~~~g~l~ 273 (294)
|...++|.+.. ............+.......|++|++++..+... ..+++++||+..++|.
T Consensus 70 ~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~ 132 (326)
T 2w1i_A 70 GEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132 (326)
T ss_dssp CEEEEEEEESS---CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHH
T ss_pred ceEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHH
Confidence 44555665532 1222333455677777778999999998765443 3678999999988875
No 288
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=21.52 E-value=20 Score=29.11 Aligned_cols=59 Identities=15% Similarity=0.294 Sum_probs=39.6
Q ss_pred CchhhhHhhhccCCCChHhhhhhhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCC
Q 022605 210 GTKVWVKILDKESHKDPERINAFTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAK 269 (294)
Q Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~ 269 (294)
|..-++|.+.... ............+.......|++|++++.....+...++++||+..
T Consensus 27 ~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 27 HEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp CCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CceEEEEeeeccC-CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 3444556553222 2222223344566667777999999999988888889999999974
No 289
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=21.01 E-value=50 Score=28.61 Aligned_cols=42 Identities=21% Similarity=0.263 Sum_probs=33.6
Q ss_pred hhhHHHHHHHcCCCchhhhhhhhcCCCCeEEEEecCCCCCCCc
Q 022605 232 FTHELTIVEKARHPNVVQFVGAVTQNIPMMIVLEYHAKVSMPI 274 (294)
Q Consensus 232 ~~t~l~~a~~~~~~~iv~~L~~~~~~~~l~~~~e~~~~g~l~~ 274 (294)
....+......+|++|++++.... ....++++||+..|++..
T Consensus 187 ~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~ 228 (419)
T 3i6u_A 187 VETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD 228 (419)
T ss_dssp HHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGG
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHH
Confidence 456777888889999999887654 456899999999998753
Done!