Query 022608
Match_columns 294
No_of_seqs 192 out of 1919
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:50:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022608.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022608hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3104 PTR2 Dipeptide/tripept 99.9 1.7E-25 3.6E-30 206.2 15.1 194 16-233 15-212 (498)
2 KOG1237 H+/oligopeptide sympor 99.9 1.3E-23 2.8E-28 201.5 22.3 246 17-262 32-280 (571)
3 PRK10207 dipeptide/tripeptide 99.9 1E-22 2.3E-27 193.9 21.2 189 18-231 10-198 (489)
4 TIGR00924 yjdL_sub1_fam amino 99.9 2.7E-21 5.8E-26 183.8 20.6 189 18-231 6-196 (475)
5 PRK15462 dipeptide/tripeptide 99.9 8.9E-21 1.9E-25 179.4 20.8 186 20-230 7-192 (493)
6 PRK09584 tppB putative tripept 99.9 8.1E-20 1.8E-24 174.7 21.9 185 19-228 18-202 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 99.8 7.2E-19 1.6E-23 171.7 20.9 203 36-255 1-210 (654)
8 PRK10213 nepI ribonucleoside t 99.8 9.1E-18 2E-22 155.9 20.6 177 15-221 13-189 (394)
9 PRK10054 putative transporter; 99.8 2.4E-17 5.2E-22 153.1 20.6 173 21-223 6-178 (395)
10 KOG1330 Sugar transporter/spin 99.8 6.7E-19 1.5E-23 160.8 9.4 179 19-227 30-209 (493)
11 TIGR02332 HpaX 4-hydroxyphenyl 99.8 2.4E-17 5.3E-22 153.9 19.6 175 20-224 6-186 (412)
12 PRK03545 putative arabinose tr 99.8 3.2E-17 6.9E-22 151.7 19.8 174 21-224 8-181 (390)
13 PF07690 MFS_1: Major Facilita 99.8 3.9E-17 8.5E-22 147.5 18.3 166 28-222 2-167 (352)
14 TIGR00903 2A0129 major facilit 99.8 9.4E-17 2E-21 147.9 19.7 159 36-225 5-163 (368)
15 PRK15403 multidrug efflux syst 99.8 1.3E-16 2.8E-21 149.0 20.7 148 49-225 42-189 (413)
16 TIGR00710 efflux_Bcr_CflA drug 99.8 1.5E-16 3.2E-21 145.9 20.7 175 21-225 4-178 (385)
17 PRK11646 multidrug resistance 99.7 1.7E-16 3.7E-21 147.6 20.9 168 25-222 13-180 (400)
18 COG2814 AraJ Arabinose efflux 99.7 1.9E-16 4.1E-21 144.6 20.4 182 17-228 8-189 (394)
19 PRK12382 putative transporter; 99.7 2.9E-16 6.3E-21 145.2 20.9 171 23-214 16-186 (392)
20 TIGR00891 2A0112 putative sial 99.7 2.5E-16 5.4E-21 145.1 20.4 173 17-219 7-181 (405)
21 PRK14995 methyl viologen resis 99.7 1.8E-16 3.8E-21 151.5 19.8 179 21-228 5-183 (495)
22 PRK10504 putative transporter; 99.7 2.6E-16 5.6E-21 149.1 20.0 178 21-228 9-186 (471)
23 PRK11551 putative 3-hydroxyphe 99.7 3.1E-16 6.8E-21 145.5 19.9 173 19-221 12-184 (406)
24 TIGR00900 2A0121 H+ Antiporter 99.7 2.9E-16 6.3E-21 142.4 19.3 173 27-224 4-176 (365)
25 PRK05122 major facilitator sup 99.7 4.8E-16 1E-20 144.0 20.2 178 19-217 12-189 (399)
26 PRK15402 multidrug efflux syst 99.7 6.5E-16 1.4E-20 143.6 20.6 158 37-224 28-185 (406)
27 PRK10091 MFS transport protein 99.7 5.2E-16 1.1E-20 143.3 18.7 171 22-222 3-173 (382)
28 PRK11652 emrD multidrug resist 99.7 9.3E-16 2E-20 141.9 20.2 172 20-221 6-177 (394)
29 TIGR00895 2A0115 benzoate tran 99.7 1.5E-15 3.2E-20 139.3 21.1 173 20-222 15-187 (398)
30 PRK11663 regulatory protein Uh 99.7 6.7E-16 1.5E-20 145.1 19.1 161 29-219 30-190 (434)
31 TIGR00711 efflux_EmrB drug res 99.7 5.1E-16 1.1E-20 147.2 18.2 171 25-225 5-175 (485)
32 PRK12307 putative sialic acid 99.7 1E-15 2.2E-20 143.0 19.7 166 19-214 15-180 (426)
33 TIGR00893 2A0114 d-galactonate 99.7 5E-16 1.1E-20 141.7 16.7 153 43-224 14-166 (399)
34 TIGR00890 2A0111 Oxalate/Forma 99.7 8.6E-16 1.9E-20 139.7 17.6 155 38-223 19-173 (377)
35 PRK10406 alpha-ketoglutarate t 99.7 1.9E-15 4.1E-20 141.9 20.0 167 31-219 31-211 (432)
36 PRK03893 putative sialic acid 99.7 2.2E-15 4.7E-20 143.5 20.2 167 18-214 16-182 (496)
37 PRK10473 multidrug efflux syst 99.7 3.5E-15 7.6E-20 138.0 20.7 164 29-222 10-173 (392)
38 TIGR00886 2A0108 nitrite extru 99.7 2.5E-15 5.4E-20 137.1 19.4 159 24-211 3-171 (366)
39 PRK09874 drug efflux system pr 99.7 4.7E-15 1E-19 137.4 21.5 174 20-224 11-190 (408)
40 PRK10642 proline/glycine betai 99.7 3E-15 6.5E-20 142.9 20.6 176 20-221 248-424 (490)
41 PRK03699 putative transporter; 99.7 4.8E-15 1E-19 137.4 20.7 174 19-222 4-178 (394)
42 TIGR01299 synapt_SV2 synaptic 99.7 4.4E-15 9.5E-20 147.0 21.1 151 42-221 186-349 (742)
43 PRK09705 cynX putative cyanate 99.7 2.4E-15 5.2E-20 139.5 18.1 151 38-219 25-176 (393)
44 TIGR00897 2A0118 polyol permea 99.7 9.9E-15 2.2E-19 135.7 22.1 171 19-215 10-181 (402)
45 PRK11043 putative transporter; 99.7 4.9E-15 1.1E-19 137.4 19.6 159 37-224 18-178 (401)
46 PRK11102 bicyclomycin/multidru 99.7 3.3E-15 7.2E-20 137.1 18.2 155 40-224 9-163 (377)
47 PLN00028 nitrate transmembrane 99.7 5.9E-15 1.3E-19 140.4 20.3 175 20-225 34-217 (476)
48 COG2271 UhpC Sugar phosphate p 99.7 7E-16 1.5E-20 140.0 13.2 175 22-225 25-204 (448)
49 PRK09556 uhpT sugar phosphate 99.7 5.4E-16 1.2E-20 147.1 12.9 174 24-221 27-206 (467)
50 PRK10133 L-fucose transporter; 99.7 1.2E-14 2.6E-19 137.0 21.8 154 19-199 23-176 (438)
51 TIGR00899 2A0120 sugar efflux 99.7 6.9E-15 1.5E-19 134.5 18.5 169 28-225 3-174 (375)
52 TIGR00885 fucP L-fucose:H+ sym 99.7 1.4E-14 3E-19 135.3 20.7 172 24-222 5-202 (410)
53 PRK03633 putative MFS family t 99.7 1.8E-14 3.9E-19 132.9 20.7 155 22-206 6-160 (381)
54 cd06174 MFS The Major Facilita 99.6 9.7E-15 2.1E-19 131.3 18.3 166 26-221 3-168 (352)
55 TIGR00879 SP MFS transporter, 99.6 4.8E-15 1.1E-19 138.9 16.9 142 55-222 68-212 (481)
56 TIGR00881 2A0104 phosphoglycer 99.6 2E-15 4.4E-20 137.4 13.3 152 44-224 16-168 (379)
57 PRK11195 lysophospholipid tran 99.6 2.4E-14 5.3E-19 132.9 20.1 160 23-216 4-163 (393)
58 PRK09952 shikimate transporter 99.6 2E-14 4.4E-19 135.3 19.5 177 19-217 19-210 (438)
59 TIGR00894 2A0114euk Na(+)-depe 99.6 7.8E-15 1.7E-19 138.9 16.8 147 52-225 70-217 (465)
60 PRK15011 sugar efflux transpor 99.6 3.5E-14 7.6E-19 131.7 20.7 176 20-225 214-389 (393)
61 PRK10642 proline/glycine betai 99.6 1.8E-14 3.8E-19 137.6 18.9 174 22-217 16-203 (490)
62 PRK10077 xylE D-xylose transpo 99.6 1.5E-14 3.4E-19 137.0 18.3 151 54-222 51-210 (479)
63 TIGR00892 2A0113 monocarboxyla 99.6 2E-14 4.4E-19 136.0 18.6 150 46-225 42-192 (455)
64 COG2271 UhpC Sugar phosphate p 99.6 1.4E-14 3E-19 131.6 16.4 181 21-227 251-434 (448)
65 PRK10489 enterobactin exporter 99.6 5.6E-15 1.2E-19 137.9 14.1 172 27-223 22-193 (417)
66 TIGR00887 2A0109 phosphate:H+ 99.6 5.2E-14 1.1E-18 134.7 20.7 143 54-219 52-217 (502)
67 PRK15034 nitrate/nitrite trans 99.6 8.7E-14 1.9E-18 130.8 21.6 179 22-226 34-231 (462)
68 PRK11273 glpT sn-glycerol-3-ph 99.6 2.1E-14 4.5E-19 135.7 17.3 152 44-221 50-202 (452)
69 TIGR00806 rfc RFC reduced fola 99.6 5.4E-14 1.2E-18 130.9 19.2 174 19-224 23-200 (511)
70 TIGR00805 oat sodium-independe 99.6 1.2E-14 2.7E-19 142.5 14.2 200 20-226 30-280 (633)
71 PRK09556 uhpT sugar phosphate 99.6 6.7E-14 1.5E-18 132.7 18.8 176 22-224 258-446 (467)
72 TIGR00712 glpT glycerol-3-phos 99.6 4.1E-14 8.9E-19 133.1 16.6 153 45-223 49-202 (438)
73 TIGR00882 2A0105 oligosacchari 99.6 1.5E-13 3.2E-18 127.5 19.5 178 22-223 2-179 (396)
74 TIGR00898 2A0119 cation transp 99.6 4.3E-14 9.4E-19 135.0 16.0 145 47-223 113-260 (505)
75 PRK15075 citrate-proton sympor 99.6 1.4E-13 3.1E-18 129.3 18.9 173 20-214 13-199 (434)
76 PRK15011 sugar efflux transpor 99.6 3.3E-13 7.1E-18 125.2 21.1 175 23-225 16-192 (393)
77 PRK03699 putative transporter; 99.6 1.5E-13 3.2E-18 127.4 18.5 170 23-222 206-375 (394)
78 COG2223 NarK Nitrate/nitrite t 99.6 1.7E-13 3.7E-18 124.5 17.4 185 19-232 11-198 (417)
79 PRK05122 major facilitator sup 99.6 2E-13 4.4E-18 126.4 18.4 169 31-231 225-393 (399)
80 PRK09952 shikimate transporter 99.6 3.7E-13 8E-18 126.7 19.8 180 21-225 249-431 (438)
81 cd06174 MFS The Major Facilita 99.6 4.3E-13 9.3E-18 120.6 19.5 172 23-223 176-348 (352)
82 KOG2532 Permease of the major 99.6 1.1E-13 2.3E-18 130.7 16.0 158 52-236 67-225 (466)
83 TIGR00899 2A0120 sugar efflux 99.6 3.9E-13 8.4E-18 122.9 19.2 159 36-224 213-371 (375)
84 TIGR00896 CynX cyanate transpo 99.6 8.6E-14 1.9E-18 127.0 14.7 146 43-219 20-167 (355)
85 PRK09528 lacY galactoside perm 99.5 3.8E-13 8.2E-18 125.7 18.6 181 22-226 10-190 (420)
86 KOG0254 Predicted transporter 99.5 7.6E-13 1.7E-17 127.1 19.9 135 59-222 90-225 (513)
87 PRK11010 ampG muropeptide tran 99.5 1.9E-12 4.2E-17 123.7 22.1 178 18-223 8-191 (491)
88 TIGR00890 2A0111 Oxalate/Forma 99.5 5.5E-13 1.2E-17 121.3 17.6 169 23-219 206-374 (377)
89 TIGR01299 synapt_SV2 synaptic 99.5 5.7E-13 1.2E-17 132.1 18.9 133 62-224 599-731 (742)
90 PRK08633 2-acyl-glycerophospho 99.5 8.2E-13 1.8E-17 137.9 20.8 156 21-202 8-165 (1146)
91 TIGR00883 2A0106 metabolite-pr 99.5 2.5E-13 5.4E-18 124.3 14.9 166 23-214 220-388 (394)
92 PRK09705 cynX putative cyanate 99.5 1.9E-12 4.2E-17 120.1 20.6 176 22-227 205-381 (393)
93 TIGR00901 2A0125 AmpG-related 99.5 1.3E-12 2.8E-17 119.2 18.7 153 45-224 10-175 (356)
94 PRK03893 putative sialic acid 99.5 1.4E-12 2.9E-17 124.3 19.3 149 40-215 293-441 (496)
95 TIGR00893 2A0114 d-galactonate 99.5 1.8E-12 4E-17 118.1 19.2 179 22-223 215-395 (399)
96 PRK03545 putative arabinose tr 99.5 3.2E-12 7E-17 118.2 20.9 174 24-227 207-380 (390)
97 PRK11902 ampG muropeptide tran 99.5 3.9E-12 8.4E-17 118.3 21.0 167 28-222 5-177 (402)
98 PTZ00207 hypothetical protein; 99.5 4.2E-12 9.1E-17 122.6 21.3 172 20-220 26-198 (591)
99 PRK11551 putative 3-hydroxyphe 99.5 3.2E-12 7E-17 118.5 19.8 165 27-221 225-390 (406)
100 PRK06814 acylglycerophosphoeth 99.5 2.6E-12 5.6E-17 134.3 21.0 145 49-221 42-189 (1140)
101 TIGR00892 2A0113 monocarboxyla 99.5 1.1E-12 2.4E-17 124.1 16.6 173 23-224 242-418 (455)
102 TIGR00902 2A0127 phenyl propri 99.5 2.7E-12 5.9E-17 118.6 18.7 157 27-215 9-167 (382)
103 PRK11273 glpT sn-glycerol-3-ph 99.5 1.6E-12 3.4E-17 122.9 17.4 177 22-225 253-433 (452)
104 PRK09874 drug efflux system pr 99.5 2.6E-12 5.5E-17 119.1 18.2 166 31-225 228-396 (408)
105 PRK12382 putative transporter; 99.5 1.8E-12 4E-17 119.8 17.2 162 32-225 226-387 (392)
106 TIGR00889 2A0110 nucleoside tr 99.5 2.3E-12 4.9E-17 120.7 17.7 177 25-227 211-402 (418)
107 PF00854 PTR2: POT family; In 99.5 1.6E-13 3.5E-18 126.5 9.4 152 89-256 1-154 (372)
108 TIGR00891 2A0112 putative sial 99.5 2E-12 4.3E-17 119.1 16.3 157 27-211 243-400 (405)
109 KOG0255 Synaptic vesicle trans 99.5 1.4E-12 3E-17 125.4 15.5 140 51-222 111-250 (521)
110 PRK11663 regulatory protein Uh 99.5 5.4E-12 1.2E-16 118.6 18.6 179 23-227 244-424 (434)
111 PRK10489 enterobactin exporter 99.5 3.8E-12 8.3E-17 118.8 17.5 157 38-223 239-395 (417)
112 TIGR00792 gph sugar (Glycoside 99.4 2.1E-12 4.5E-17 120.9 15.6 173 31-224 8-191 (437)
113 PRK09528 lacY galactoside perm 99.4 1.4E-12 3E-17 121.9 14.3 160 36-224 237-400 (420)
114 TIGR00897 2A0118 polyol permea 99.4 1.1E-11 2.3E-16 115.4 20.1 176 22-224 222-398 (402)
115 TIGR00880 2_A_01_02 Multidrug 99.4 5.9E-13 1.3E-17 103.8 9.9 131 66-225 6-136 (141)
116 PF11700 ATG22: Vacuole efflux 99.4 1.2E-11 2.6E-16 117.4 19.6 186 20-226 279-467 (477)
117 COG0738 FucP Fucose permease [ 99.4 1.6E-11 3.4E-16 111.3 18.7 152 23-201 14-165 (422)
118 TIGR00902 2A0127 phenyl propri 99.4 1.8E-11 4E-16 113.0 19.8 169 22-222 205-374 (382)
119 KOG3764 Vesicular amine transp 99.4 7.7E-13 1.7E-17 119.3 10.1 148 52-227 100-247 (464)
120 PRK11128 putative 3-phenylprop 99.4 9.4E-12 2E-16 114.9 17.7 156 31-220 13-172 (382)
121 PRK15075 citrate-proton sympor 99.4 9.9E-12 2.2E-16 116.8 18.0 152 29-206 245-398 (434)
122 PRK03633 putative MFS family t 99.4 1.8E-11 3.8E-16 113.0 19.4 154 36-222 214-367 (381)
123 PLN00028 nitrate transmembrane 99.4 1E-11 2.2E-16 118.2 17.7 173 24-227 254-433 (476)
124 TIGR00883 2A0106 metabolite-pr 99.4 8.7E-12 1.9E-16 114.0 16.4 156 44-220 14-184 (394)
125 PF06609 TRI12: Fungal trichot 99.4 9.8E-12 2.1E-16 119.7 17.0 151 44-225 65-215 (599)
126 TIGR01301 GPH_sucrose GPH fami 99.4 2.4E-11 5.2E-16 115.0 18.7 196 23-229 5-220 (477)
127 COG2814 AraJ Arabinose efflux 99.4 3.5E-11 7.5E-16 110.2 19.1 178 21-228 210-387 (394)
128 TIGR00879 SP MFS transporter, 99.4 1.5E-11 3.3E-16 115.1 17.4 162 45-225 306-468 (481)
129 PRK10406 alpha-ketoglutarate t 99.4 2.9E-11 6.2E-16 113.6 19.1 167 31-224 252-421 (432)
130 PRK11010 ampG muropeptide tran 99.4 4.4E-11 9.5E-16 114.4 20.5 179 25-228 225-404 (491)
131 TIGR00712 glpT glycerol-3-phos 99.4 1.8E-11 4E-16 115.1 16.3 178 23-225 252-431 (438)
132 KOG0569 Permease of the major 99.4 2.3E-11 5.1E-16 114.4 16.3 145 61-231 63-211 (485)
133 TIGR01272 gluP glucose/galacto 99.3 5.2E-11 1.1E-15 107.2 17.2 161 23-215 141-303 (310)
134 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.6E-11 7.7E-16 112.4 16.3 164 23-215 243-409 (412)
135 PRK10504 putative transporter; 99.3 5.8E-11 1.3E-15 112.5 17.9 157 23-205 262-418 (471)
136 TIGR00894 2A0114euk Na(+)-depe 99.3 1.3E-10 2.7E-15 110.1 20.2 178 21-225 260-448 (465)
137 COG2223 NarK Nitrate/nitrite t 99.3 2.8E-11 6.1E-16 110.2 14.6 185 22-229 218-403 (417)
138 KOG4686 Predicted sugar transp 99.3 6E-11 1.3E-15 102.9 15.8 169 18-217 260-432 (459)
139 PF05977 MFS_3: Transmembrane 99.3 1.4E-10 3E-15 111.3 19.9 181 22-227 10-190 (524)
140 PRK15402 multidrug efflux syst 99.3 3.3E-10 7.2E-15 105.3 22.0 169 23-216 216-384 (406)
141 TIGR00900 2A0121 H+ Antiporter 99.3 6.1E-11 1.3E-15 107.4 16.5 153 23-203 211-364 (365)
142 KOG2615 Permease of the major 99.3 9.6E-12 2.1E-16 111.7 10.3 117 55-201 65-181 (451)
143 PRK10091 MFS transport protein 99.3 1.6E-10 3.4E-15 106.8 18.4 168 24-220 201-369 (382)
144 PRK12307 putative sialic acid 99.3 2E-10 4.4E-15 107.2 19.2 143 38-208 247-389 (426)
145 PRK11128 putative 3-phenylprop 99.3 2.4E-10 5.2E-15 105.5 19.3 166 22-219 205-371 (382)
146 PRK14995 methyl viologen resis 99.3 6.8E-11 1.5E-15 113.1 16.1 154 22-201 259-412 (495)
147 TIGR00711 efflux_EmrB drug res 99.3 6.2E-11 1.4E-15 112.3 15.4 156 22-202 255-410 (485)
148 KOG2533 Permease of the major 99.3 1.6E-10 3.5E-15 109.7 16.6 151 50-229 73-229 (495)
149 TIGR00889 2A0110 nucleoside tr 99.3 5.4E-10 1.2E-14 104.7 20.1 164 26-219 6-172 (418)
150 TIGR00881 2A0104 phosphoglycer 99.3 1.3E-10 2.8E-15 105.7 15.3 162 22-209 216-379 (379)
151 PRK09669 putative symporter Ya 99.3 1.1E-10 2.4E-15 110.0 15.3 170 29-219 16-196 (444)
152 TIGR00895 2A0115 benzoate tran 99.3 2.1E-10 4.5E-15 105.2 16.6 147 23-199 251-397 (398)
153 TIGR02718 sider_RhtX_FptX side 99.3 5.3E-10 1.1E-14 103.4 19.0 174 24-220 210-384 (390)
154 TIGR00710 efflux_Bcr_CflA drug 99.3 9E-10 1.9E-14 100.9 20.3 162 24-210 208-369 (385)
155 TIGR00792 gph sugar (Glycoside 99.3 2.6E-10 5.6E-15 106.7 16.9 161 22-205 222-383 (437)
156 TIGR00882 2A0105 oligosacchari 99.3 2.7E-10 5.9E-15 105.6 16.7 169 24-221 217-389 (396)
157 TIGR00896 CynX cyanate transpo 99.2 4.5E-10 9.6E-15 102.5 17.7 154 22-204 197-350 (355)
158 PRK10077 xylE D-xylose transpo 99.2 1.1E-09 2.3E-14 103.9 20.9 156 44-225 293-455 (479)
159 KOG2504 Monocarboxylate transp 99.2 8.4E-11 1.8E-15 112.4 13.2 172 27-228 47-222 (509)
160 PRK10213 nepI ribonucleoside t 99.2 1.3E-09 2.9E-14 101.2 20.5 164 23-217 217-381 (394)
161 TIGR00788 fbt folate/biopterin 99.2 5E-10 1.1E-14 106.5 17.8 171 24-221 28-203 (468)
162 PRK15034 nitrate/nitrite trans 99.2 6.1E-10 1.3E-14 104.9 18.1 185 23-226 253-453 (462)
163 COG2270 Permeases of the major 99.2 1.7E-10 3.6E-15 105.3 13.8 174 22-224 252-426 (438)
164 PRK10133 L-fucose transporter; 99.2 5.5E-10 1.2E-14 105.3 17.7 161 27-219 263-425 (438)
165 PRK09848 glucuronide transport 99.2 6.3E-10 1.4E-14 105.0 18.0 163 22-205 228-391 (448)
166 TIGR00887 2A0109 phosphate:H+ 99.2 3.5E-10 7.5E-15 108.4 16.2 166 30-221 296-483 (502)
167 PRK10429 melibiose:sodium symp 99.2 5.2E-10 1.1E-14 106.4 16.5 146 29-196 13-163 (473)
168 PF00083 Sugar_tr: Sugar (and 99.2 3.3E-13 7.1E-18 127.0 -5.7 148 58-231 46-198 (451)
169 PRK08633 2-acyl-glycerophospho 99.2 6.1E-10 1.3E-14 116.5 17.8 163 23-214 233-397 (1146)
170 PF05977 MFS_3: Transmembrane 99.2 1.2E-09 2.6E-14 104.9 18.1 172 24-224 220-391 (524)
171 PF13347 MFS_2: MFS/sugar tran 99.2 7.2E-10 1.6E-14 104.0 15.9 163 21-205 224-387 (428)
172 PRK11902 ampG muropeptide tran 99.2 4E-09 8.6E-14 98.1 20.2 152 43-223 230-386 (402)
173 COG2807 CynX Cyanate permease 99.2 4E-09 8.6E-14 94.6 18.8 167 22-217 208-375 (395)
174 PRK06814 acylglycerophosphoeth 99.2 7.3E-10 1.6E-14 116.0 16.2 183 22-214 225-409 (1140)
175 PRK10054 putative transporter; 99.2 9.6E-10 2.1E-14 102.2 15.3 172 23-223 207-380 (395)
176 PRK11646 multidrug resistance 99.1 2E-09 4.3E-14 100.3 16.7 134 41-203 227-360 (400)
177 PRK10429 melibiose:sodium symp 99.1 2E-09 4.3E-14 102.4 16.7 165 22-205 231-396 (473)
178 TIGR02718 sider_RhtX_FptX side 99.1 4.5E-09 9.8E-14 97.2 18.7 177 24-226 3-183 (390)
179 PRK11462 putative transporter; 99.1 4.2E-09 9.2E-14 99.9 18.3 149 29-198 16-168 (460)
180 PRK11195 lysophospholipid tran 99.1 5.8E-09 1.3E-13 96.9 18.9 156 35-220 218-373 (393)
181 TIGR00903 2A0129 major facilit 99.1 4.4E-09 9.5E-14 97.0 17.9 166 22-223 192-361 (368)
182 TIGR00901 2A0125 AmpG-related 99.1 2.1E-09 4.5E-14 98.0 15.5 144 24-186 211-355 (356)
183 PF13347 MFS_2: MFS/sugar tran 99.1 2.7E-10 5.8E-15 106.9 9.6 179 31-229 10-200 (428)
184 COG2807 CynX Cyanate permease 99.1 4.8E-09 1E-13 94.1 16.8 161 34-226 24-185 (395)
185 KOG0253 Synaptic vesicle trans 99.1 4.4E-09 9.5E-14 94.5 15.8 189 40-262 95-285 (528)
186 PRK09848 glucuronide transport 99.1 4.9E-09 1.1E-13 98.9 17.2 150 29-198 15-173 (448)
187 TIGR00898 2A0119 cation transp 99.1 2.5E-09 5.4E-14 102.3 14.9 141 51-223 351-491 (505)
188 KOG0252 Inorganic phosphate tr 99.1 5.6E-10 1.2E-14 102.7 9.8 118 54-193 80-197 (538)
189 PF07690 MFS_1: Major Facilita 99.1 2.1E-09 4.5E-14 97.0 13.5 141 27-193 211-352 (352)
190 PRK11043 putative transporter; 99.1 2.8E-08 6.2E-13 92.1 21.3 150 30-205 211-360 (401)
191 KOG2504 Monocarboxylate transp 99.1 3E-09 6.6E-14 101.7 14.8 176 22-227 298-476 (509)
192 PRK11102 bicyclomycin/multidru 99.0 3.8E-08 8.2E-13 90.2 20.7 147 25-197 197-344 (377)
193 PF05631 DUF791: Protein of un 99.0 3.3E-08 7.1E-13 89.1 18.1 153 51-228 62-217 (354)
194 PRK09669 putative symporter Ya 99.0 1.5E-08 3.2E-13 95.6 16.0 161 23-205 230-391 (444)
195 KOG2532 Permease of the major 99.0 2E-08 4.4E-13 95.0 16.5 177 22-226 258-446 (466)
196 PRK10473 multidrug efflux syst 99.0 1.2E-07 2.6E-12 87.7 20.8 71 39-110 220-290 (392)
197 COG2211 MelB Na+/melibiose sym 99.0 3.7E-08 8.1E-13 92.2 16.9 155 25-200 15-173 (467)
198 TIGR00886 2A0108 nitrite extru 98.9 1.2E-08 2.7E-13 92.9 12.6 139 24-188 227-365 (366)
199 PRK11652 emrD multidrug resist 98.9 2.4E-07 5.1E-12 85.7 20.8 139 41-206 226-364 (394)
200 KOG0569 Permease of the major 98.9 1.5E-07 3.2E-12 88.9 18.6 188 21-229 268-456 (485)
201 TIGR00885 fucP L-fucose:H+ sym 98.9 7.3E-08 1.6E-12 90.2 16.5 158 28-217 238-402 (410)
202 COG2211 MelB Na+/melibiose sym 98.9 1.3E-07 2.8E-12 88.7 17.5 161 23-204 237-398 (467)
203 KOG2325 Predicted transporter/ 98.9 3.7E-08 8.1E-13 92.5 13.4 156 15-195 27-184 (488)
204 KOG0253 Synaptic vesicle trans 98.9 4.8E-08 1.1E-12 87.9 13.4 147 21-196 325-490 (528)
205 PF03825 Nuc_H_symport: Nucleo 98.8 8.9E-07 1.9E-11 82.6 21.2 117 26-165 6-122 (400)
206 PF01306 LacY_symp: LacY proto 98.8 2.2E-07 4.8E-12 86.1 16.7 177 20-225 218-398 (412)
207 PF06813 Nodulin-like: Nodulin 98.8 3.2E-07 7E-12 79.7 16.3 149 21-195 2-150 (250)
208 PF03825 Nuc_H_symport: Nucleo 98.8 7.2E-07 1.6E-11 83.2 18.8 159 24-206 209-368 (400)
209 PF01306 LacY_symp: LacY proto 98.7 7.7E-08 1.7E-12 89.1 10.7 73 23-96 8-80 (412)
210 PRK15403 multidrug efflux syst 98.7 9.9E-07 2.1E-11 82.5 17.9 168 22-216 218-386 (413)
211 PRK11462 putative transporter; 98.7 1.1E-06 2.5E-11 83.4 18.4 157 27-205 233-390 (460)
212 PF03137 OATP: Organic Anion T 98.7 2E-09 4.4E-14 103.7 -0.9 193 29-233 10-256 (539)
213 TIGR00924 yjdL_sub1_fam amino 98.7 5.6E-07 1.2E-11 85.8 15.6 182 27-227 277-468 (475)
214 PF03209 PUCC: PUCC protein; 98.7 1.3E-06 2.8E-11 80.1 17.1 166 33-223 219-394 (403)
215 KOG2563 Permease of the major 98.7 1.5E-06 3.3E-11 80.3 16.6 134 44-201 66-201 (480)
216 COG0738 FucP Fucose permease [ 98.6 4E-06 8.6E-11 76.6 16.6 140 40-211 254-393 (422)
217 COG0477 ProP Permeases of the 98.5 8.2E-06 1.8E-10 70.5 16.7 145 43-215 23-173 (338)
218 PF03092 BT1: BT1 family; Int 98.5 4.9E-06 1.1E-10 78.5 16.0 156 44-222 11-170 (433)
219 KOG3764 Vesicular amine transp 98.5 3.5E-07 7.5E-12 83.2 7.4 163 34-219 282-446 (464)
220 KOG2533 Permease of the major 98.5 2E-06 4.2E-11 82.1 12.5 164 23-213 274-442 (495)
221 PRK10207 dipeptide/tripeptide 98.4 9.1E-06 2E-10 77.8 15.9 146 34-199 281-438 (489)
222 PRK09584 tppB putative tripept 98.4 1.3E-05 2.7E-10 77.1 16.2 169 32-220 282-472 (500)
223 KOG3626 Organic anion transpor 98.4 3E-06 6.5E-11 83.1 11.9 200 22-232 96-348 (735)
224 PF03209 PUCC: PUCC protein; 98.4 2.2E-05 4.7E-10 72.2 15.9 141 50-204 7-153 (403)
225 TIGR00788 fbt folate/biopterin 98.3 1.3E-06 2.8E-11 83.1 7.9 136 50-204 280-415 (468)
226 KOG2816 Predicted transporter 98.3 2.3E-05 4.9E-10 74.3 15.0 168 27-228 23-200 (463)
227 KOG0254 Predicted transporter 98.3 2.2E-05 4.8E-10 75.6 15.3 183 20-221 292-476 (513)
228 TIGR01301 GPH_sucrose GPH fami 98.3 6.9E-05 1.5E-09 71.3 17.7 206 18-229 254-473 (477)
229 PF11700 ATG22: Vacuole efflux 98.3 7.9E-05 1.7E-09 71.1 18.1 173 60-253 72-276 (477)
230 PF12832 MFS_1_like: MFS_1 lik 98.3 1.4E-05 3E-10 56.6 9.6 63 34-98 12-74 (77)
231 PF06609 TRI12: Fungal trichot 98.2 0.00011 2.4E-09 71.4 17.2 150 19-195 307-460 (599)
232 KOG3762 Predicted transporter 98.1 2.5E-05 5.3E-10 73.8 11.6 170 29-228 378-548 (618)
233 PF00083 Sugar_tr: Sugar (and 98.1 1.2E-08 2.5E-13 96.1 -11.9 180 23-225 253-434 (451)
234 KOG0252 Inorganic phosphate tr 98.0 8.8E-06 1.9E-10 75.5 6.2 178 22-225 304-496 (538)
235 TIGR00805 oat sodium-independe 98.0 0.00015 3.2E-09 71.7 14.1 83 22-105 330-415 (633)
236 KOG4686 Predicted sugar transp 97.9 4.2E-07 9.1E-12 79.4 -3.9 136 42-202 63-198 (459)
237 PF05978 UNC-93: Ion channel r 97.8 0.00093 2E-08 53.9 13.7 112 54-195 33-144 (156)
238 KOG0637 Sucrose transporter an 97.8 2.1E-05 4.6E-10 72.9 4.2 167 22-199 32-202 (498)
239 PRK03612 spermidine synthase; 97.7 0.0065 1.4E-07 58.7 19.7 159 30-214 22-184 (521)
240 COG2270 Permeases of the major 97.7 0.0013 2.8E-08 60.9 13.7 129 41-195 34-170 (438)
241 KOG2563 Permease of the major 97.6 0.00035 7.7E-09 64.9 9.8 155 52-231 295-454 (480)
242 PF01770 Folate_carrier: Reduc 97.6 0.0056 1.2E-07 57.0 17.7 154 42-225 23-180 (412)
243 TIGR01272 gluP glucose/galacto 97.5 0.0003 6.4E-09 63.3 7.7 84 133-222 9-108 (310)
244 KOG0255 Synaptic vesicle trans 97.5 0.0072 1.6E-07 58.2 17.7 120 51-199 346-465 (521)
245 TIGR00769 AAA ADP/ATP carrier 97.5 0.012 2.5E-07 56.1 18.6 167 19-200 4-189 (472)
246 KOG2615 Permease of the major 97.5 0.0015 3.2E-08 59.7 11.7 151 23-201 261-413 (451)
247 PRK15462 dipeptide/tripeptide 97.5 0.0071 1.5E-07 58.0 16.9 120 60-199 310-437 (493)
248 PTZ00207 hypothetical protein; 97.5 0.0022 4.8E-08 62.7 13.0 173 22-226 353-551 (591)
249 PF06779 DUF1228: Protein of u 97.3 0.0039 8.4E-08 44.8 9.2 71 38-110 8-78 (85)
250 KOG2816 Predicted transporter 97.2 0.0029 6.3E-08 60.1 10.7 151 20-199 238-389 (463)
251 KOG4332 Predicted sugar transp 97.0 0.00065 1.4E-08 59.3 3.9 100 43-166 57-157 (454)
252 KOG2325 Predicted transporter/ 96.7 0.0023 5E-08 60.6 5.3 196 18-219 258-467 (488)
253 KOG3762 Predicted transporter 96.6 0.0022 4.7E-08 61.0 3.9 65 36-102 25-89 (618)
254 PF06963 FPN1: Ferroportin1 (F 96.6 0.19 4.1E-06 47.4 16.9 138 40-197 276-413 (432)
255 KOG3098 Uncharacterized conser 96.5 0.069 1.5E-06 50.6 13.6 102 63-194 55-156 (461)
256 KOG3626 Organic anion transpor 96.4 0.043 9.3E-07 54.5 11.6 76 23-98 393-470 (735)
257 PF03137 OATP: Organic Anion T 96.2 0.0012 2.6E-08 64.0 0.0 172 25-202 308-514 (539)
258 COG3104 PTR2 Dipeptide/tripept 96.1 0.18 3.8E-06 47.9 13.7 140 61-219 327-479 (498)
259 PF02487 CLN3: CLN3 protein; 95.9 0.067 1.5E-06 49.8 9.7 165 27-225 5-193 (402)
260 KOG1330 Sugar transporter/spin 95.4 0.19 4.2E-06 47.3 10.8 128 52-206 277-417 (493)
261 KOG3098 Uncharacterized conser 95.1 1.2 2.7E-05 42.3 15.5 116 67-193 288-405 (461)
262 KOG3574 Acetyl-CoA transporter 94.8 1.1 2.4E-05 41.5 13.6 156 17-195 26-188 (510)
263 PF06963 FPN1: Ferroportin1 (F 94.6 4 8.7E-05 38.6 17.5 187 23-221 3-194 (432)
264 PF03092 BT1: BT1 family; Int 93.4 0.19 4.2E-06 47.4 6.4 130 55-203 252-381 (433)
265 TIGR00769 AAA ADP/ATP carrier 92.3 11 0.00024 36.1 20.4 72 142-218 274-345 (472)
266 PF02487 CLN3: CLN3 protein; 91.9 3.4 7.3E-05 38.6 12.2 61 133-199 334-394 (402)
267 KOG1479 Nucleoside transporter 91.4 12 0.00027 34.9 17.2 127 23-166 19-148 (406)
268 KOG3097 Predicted membrane pro 89.9 5.5 0.00012 36.2 11.0 114 22-166 29-142 (390)
269 TIGR00926 2A1704 Peptide:H+ sy 89.7 8.8 0.00019 38.4 13.6 184 54-255 16-207 (654)
270 KOG0637 Sucrose transporter an 88.7 0.83 1.8E-05 43.1 5.2 86 19-105 276-378 (498)
271 PF03219 TLC: TLC ATP/ADP tran 88.6 24 0.00052 34.0 16.0 169 18-201 20-205 (491)
272 KOG4332 Predicted sugar transp 87.1 12 0.00026 33.4 11.0 138 61-221 285-425 (454)
273 TIGR00939 2a57 Equilibrative N 87.0 7.2 0.00016 36.9 10.6 57 133-195 371-427 (437)
274 COG3202 ATP/ADP translocase [E 87.0 30 0.00065 33.3 16.4 169 18-201 23-209 (509)
275 TIGR00939 2a57 Equilibrative N 84.6 37 0.0008 32.2 18.4 33 133-166 105-137 (437)
276 TIGR00880 2_A_01_02 Multidrug 83.2 16 0.00035 27.0 10.6 45 59-104 88-132 (141)
277 TIGR00806 rfc RFC reduced fola 81.3 23 0.0005 34.1 11.2 93 62-181 302-394 (511)
278 PF03219 TLC: TLC ATP/ADP tran 80.0 59 0.0013 31.3 18.8 73 142-219 290-362 (491)
279 COG5336 Uncharacterized protei 75.9 13 0.00029 27.7 6.2 34 64-97 48-81 (116)
280 KOG1479 Nucleoside transporter 72.5 28 0.00062 32.5 9.0 110 42-167 263-376 (406)
281 PRK10263 DNA translocase FtsK; 69.8 30 0.00065 37.2 9.3 13 73-85 63-75 (1355)
282 PF11947 DUF3464: Protein of u 67.4 42 0.0009 26.9 7.7 31 156-192 116-146 (153)
283 PRK11469 hypothetical protein; 66.5 74 0.0016 26.4 10.5 78 20-106 104-182 (188)
284 PF13000 Acatn: Acetyl-coenzym 61.6 1.6E+02 0.0035 28.6 11.7 60 136-201 407-466 (544)
285 PF07672 MFS_Mycoplasma: Mycop 60.2 1.1E+02 0.0024 26.9 9.7 96 64-180 147-246 (267)
286 KOG4830 Predicted sugar transp 60.1 12 0.00026 33.1 3.7 62 29-92 24-94 (412)
287 PF09527 ATPase_gene1: Putativ 56.9 49 0.0011 21.2 7.0 29 66-94 8-36 (55)
288 KOG3574 Acetyl-CoA transporter 55.7 80 0.0017 29.8 8.3 59 142-206 377-435 (510)
289 KOG1237 H+/oligopeptide sympor 54.5 30 0.00066 34.0 6.0 93 133-231 457-564 (571)
290 PF01733 Nucleoside_tran: Nucl 51.3 5.6 0.00012 35.7 0.3 55 135-195 249-303 (309)
291 COG3619 Predicted membrane pro 51.3 1.6E+02 0.0034 25.3 16.7 62 24-85 14-82 (226)
292 TIGR02230 ATPase_gene1 F0F1-AT 49.9 77 0.0017 23.4 6.1 25 69-93 53-77 (100)
293 PF06912 DUF1275: Protein of u 49.2 1.5E+02 0.0033 24.6 15.8 41 64-105 52-95 (209)
294 PRK02237 hypothetical protein; 48.7 34 0.00073 25.6 4.0 48 58-106 56-103 (109)
295 TIGR01666 YCCS hypothetical me 48.5 2.5E+02 0.0055 28.5 11.4 51 79-150 44-97 (704)
296 PF02694 UPF0060: Uncharacteri 48.3 36 0.00078 25.4 4.1 49 58-107 54-102 (107)
297 TIGR01667 YCCS_YHJK integral m 47.5 3.2E+02 0.007 27.7 12.3 53 77-150 42-97 (701)
298 COG4232 Thiol:disulfide interc 45.6 1.8E+02 0.004 28.5 9.5 33 134-166 325-357 (569)
299 KOG4112 Signal peptidase subun 43.6 45 0.00099 24.2 3.9 56 174-232 21-76 (101)
300 PF12273 RCR: Chitin synthesis 37.9 19 0.00041 27.9 1.4 10 207-216 2-11 (130)
301 PF06779 DUF1228: Protein of u 37.7 90 0.0019 22.3 4.7 62 145-215 5-66 (85)
302 PF01528 Herpes_glycop: Herpes 36.0 49 0.0011 30.6 3.9 16 86-101 200-215 (374)
303 KOG3880 Predicted small molecu 36.0 50 0.0011 30.1 3.8 114 24-161 14-142 (409)
304 PF09930 DUF2162: Predicted tr 35.4 2.9E+02 0.0062 23.7 9.0 63 49-115 122-184 (224)
305 COG1268 BioY Uncharacterized c 35.0 1.7E+02 0.0037 24.2 6.6 22 64-85 88-109 (184)
306 COG3086 RseC Positive regulato 33.3 2.3E+02 0.005 22.5 6.7 39 53-92 67-105 (150)
307 KOG3810 Micronutrient transpor 32.1 4.3E+02 0.0093 24.7 11.1 88 64-180 277-366 (433)
308 PF00854 PTR2: POT family; In 31.5 3.3E+02 0.0072 24.6 8.8 74 34-108 43-121 (372)
309 PF11872 DUF3392: Protein of u 30.5 2.2E+02 0.0048 21.3 5.9 35 19-53 46-80 (106)
310 PF11085 YqhR: Conserved membr 30.0 2.6E+02 0.0056 22.9 6.7 25 71-95 77-101 (173)
311 PF12805 FUSC-like: FUSC-like 29.0 3.6E+02 0.0078 23.6 8.3 18 133-150 22-39 (284)
312 COG3202 ATP/ADP translocase [E 27.5 5.8E+02 0.013 24.8 18.7 79 141-224 291-370 (509)
313 PF01770 Folate_carrier: Reduc 25.8 5.7E+02 0.012 24.1 12.1 92 60-180 287-380 (412)
314 COG5547 Small integral membran 25.2 2.1E+02 0.0045 18.8 4.5 15 136-150 33-47 (62)
315 PF06645 SPC12: Microsomal sig 24.5 2.5E+02 0.0053 19.5 6.5 26 60-85 9-34 (76)
316 PF05393 Hum_adeno_E3A: Human 24.1 98 0.0021 22.2 2.9 24 214-237 43-66 (94)
317 PF05631 DUF791: Protein of un 23.8 5.8E+02 0.013 23.5 17.4 54 142-195 247-301 (354)
318 PF02632 BioY: BioY family; I 23.4 1.9E+02 0.004 23.0 4.8 25 64-89 59-83 (148)
319 PHA03242 envelope glycoprotein 23.4 6.4E+02 0.014 23.9 9.8 19 81-99 209-227 (428)
320 PF10777 YlaC: Inner membrane 22.1 3.3E+02 0.0071 21.7 5.7 38 197-234 53-90 (155)
321 PF13000 Acatn: Acetyl-coenzym 21.7 7.6E+02 0.016 24.2 9.2 66 26-95 4-76 (544)
322 PF02659 DUF204: Domain of unk 20.3 2.7E+02 0.0058 18.3 6.2 41 58-99 23-64 (67)
323 COG4262 Predicted spermidine s 20.0 7.3E+02 0.016 23.3 14.0 97 43-161 31-132 (508)
No 1
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.93 E-value=1.7e-25 Score=206.22 Aligned_cols=194 Identities=27% Similarity=0.475 Sum_probs=178.7
Q ss_pred ccCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcC----CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHH
Q 022608 16 RQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH----MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT 91 (294)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~ 91 (294)
...+++|.++.++.++++|+++||++...+..|+..+++ +|.+++..+.+.+....++.++++||++||++|+|++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 335689999999999999999999999999999998888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 022608 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (294)
Q Consensus 92 l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (294)
+..|.+++.+|.++++... ...+..++++.+++++|.|+..+++..+++|++|++|+
T Consensus 95 I~lGail~~iGh~~L~~~~--------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp--- 151 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS--------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP--- 151 (498)
T ss_pred HHHHHHHHHHHHHHHhccc--------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc---
Confidence 9999999999999988752 01466788999999999999999999999999999986
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccceecc
Q 022608 172 TKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNL 233 (294)
Q Consensus 172 ~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
||-..++.+|++.|+|++++|++.+++.+++||+..|...++.+.++++.++++++++...
T Consensus 152 -rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 152 -RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred -ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 5888999999999999999999999999999999999999999999999999988766543
No 2
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.92 E-value=1.3e-23 Score=201.49 Aligned_cols=246 Identities=51% Similarity=0.894 Sum_probs=228.2
Q ss_pred cCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
..+.|+++..++..+.++++++|++..++..|++..+|.+...+...++.+.+...+.++++++++|.++||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC---CCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPC---EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
+++.+|..++.+...+|++.++.| .+.+.|..+.......++.++.+.++|.|+..++..++.+|++++.++.++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999988999999887 34557888888888899999999999999999999999999999776666667
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccceeccCCCCChhHHHHHHHHHHHHh
Q 022608 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRK 253 (294)
Q Consensus 174 rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (294)
....+.|+++..++|..++..+..+++++.||.+.|.++.+++.+++++++...+.|+.++|.++|...+.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred CccccCCCC
Q 022608 254 RKLTMVTDP 262 (294)
Q Consensus 254 ~~~~~~~~~ 262 (294)
++...+.++
T Consensus 272 ~~~~~~~~~ 280 (571)
T KOG1237|consen 272 RKAVVSLDP 280 (571)
T ss_pred HhccCCCcc
Confidence 887766653
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1e-22 Score=193.87 Aligned_cols=189 Identities=17% Similarity=0.304 Sum_probs=165.3
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 97 (294)
++++|.++.++++++++++++|++..+++.|+++++|++..+++++.+.+....++..+++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
++.++.+.+.++.. ....++++++++++|.|...++..++++|++|++++ +|++.
T Consensus 90 ~~~~g~~~~~~~~~---------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~ 144 (489)
T PRK10207 90 VLAIGYFMTGMSLL---------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGA 144 (489)
T ss_pred HHHHHHHHHHHhcc---------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcc
Confidence 99999988887540 123456789999999999999999999999998752 46788
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcccee
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
+++++++.|+|..++|.+++++.++.||++.|++..+.+.++++.+...++.++
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVK 198 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence 999999999999999999999999999999999987766666666655554443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=2.7e-21 Score=183.75 Aligned_cols=189 Identities=19% Similarity=0.310 Sum_probs=165.5
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhh--cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~ 95 (294)
.++++.++.+++.++++++++|++.++++.|++++ +|++..+++.+.+.+.++..++++++|+++||++|||++++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 35677888999999999999999999999999887 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 022608 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (294)
Q Consensus 96 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg 175 (294)
.++..++.+++.++. +.+.+.+++++.|+|.|...++..++++|++|+++++ +|+
T Consensus 86 ~~~~~~g~~~~~~~~----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~ 140 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRD 140 (475)
T ss_pred HHHHHHHHHHHHhcc----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---ccc
Confidence 999999988877654 5566778899999999999999999999999876421 588
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcccee
Q 022608 176 KYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (294)
Q Consensus 176 ~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
++++++|++.++|+++||.+++++.+.+||++.|.+.++.++++.+.+...++.++
T Consensus 141 ~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~ 196 (475)
T TIGR00924 141 GGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLR 196 (475)
T ss_pred ceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 89999999999999999999999999899999999988776666666655554443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=8.9e-21 Score=179.40 Aligned_cols=186 Identities=23% Similarity=0.416 Sum_probs=159.5
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
+++.++.++..++++++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||+++++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999779999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+++.... .....++++..+..+|.|...++..++++|++|++++ +|.+.++
T Consensus 87 ~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~ 141 (493)
T PRK15462 87 AIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFS 141 (493)
T ss_pred HHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceeh
Confidence 88877665322 0122344555566788888888889999999998643 5888999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccce
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLY 230 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 230 (294)
++|...++|+.++|.+.+++.+.+||++.|.+.++.++++++.+...++.+
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l 192 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHF 192 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999998877777777776655544
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.85 E-value=8.1e-20 Score=174.67 Aligned_cols=185 Identities=19% Similarity=0.365 Sum_probs=157.7
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
++++.++.++..++++++++|++..+++.|+++++|++..+++++.+.+........+++|+++||++|||++++++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 56778899999999999999999999999999999999999999888888777777889999999944999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+++.++. ...+.+.+++++.|+|.|...++..++++|++|++++ ++++.+
T Consensus 98 ~~ig~~l~~~~~---------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~ 152 (500)
T PRK09584 98 LAIGYALVAWSG---------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAF 152 (500)
T ss_pred HHHHHHHHHHhc---------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcc
Confidence 998887777643 0345567788899999999999999999999987642 456678
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
+++|++.++|+.++|.+.+++.+.+||++.|.+.++...++++.++...+
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~ 202 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQR 202 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 89999999999999999999999999999999988766666655554443
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.82 E-value=7.2e-19 Score=171.66 Aligned_cols=203 Identities=31% Similarity=0.596 Sum_probs=172.3
Q ss_pred HhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 022608 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~ 115 (294)
++||++...+..|+++.+|++.+.+..+...+....++.++++|+++|+++||++++.++.+++.+|.+++++.. .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 468999999999999999999999999999999999999999999999999999999999999999998888754 2211
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
. ........+++..+.++|.|++.++..++.+|++++++ ++++.++++++|++.|+|+++++.+
T Consensus 80 ~-------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 G-------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred c-------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01134456788889999999999999999999998754 2358899999999999999999999
Q ss_pred hhheeec-------cchhhhhhHhHHHHHHHHHHHHHhccceeccCCCCChhHHHHHHHHHHHHhCc
Q 022608 196 LVYIQDN-------IGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRK 255 (294)
Q Consensus 196 ~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (294)
.+++.+. .+|..+|.+++++++++++++...+++++..++.+++..+..+++....+++.
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~ 210 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRF 210 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhh
Confidence 9988744 36999999999999999999988888887777778877777777777776543
No 8
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.79 E-value=9.1e-18 Score=155.88 Aligned_cols=177 Identities=11% Similarity=0.127 Sum_probs=149.9
Q ss_pred cccCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHH
Q 022608 15 KRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI 94 (294)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 94 (294)
+.++..|+..+.+.+..++.....|.....+|.+ .+++|+++.+.++..+...++..+++++.|+++||+ |||++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~ 90 (394)
T PRK10213 13 AITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVIL 90 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHH
Confidence 3445677776666666666656666656666654 568999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhh
Q 022608 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (294)
Q Consensus 95 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 174 (294)
+.++..++.+++.... +.+.+++.|++.|++.+...+...+++.|++|++ +|
T Consensus 91 ~~~~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~~ 142 (394)
T PRK10213 91 FAVLLTLSCLLVSFAN----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR------TV 142 (394)
T ss_pred HHHHHHHHHHHHHHHC----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh------HH
Confidence 9999998888777655 7889999999999999999999999999999987 59
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 175 WKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 175 g~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++..+.+....++|..++|.+++++.+.+||++.|++.+++.++..+
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999989999999887765544433
No 9
>PRK10054 putative transporter; Provisional
Probab=99.78 E-value=2.4e-17 Score=153.11 Aligned_cols=173 Identities=13% Similarity=0.134 Sum_probs=148.0
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.|+.+.+++..++...+++.+.++++.|+++++|++..+.+++.+...+...+++++.|+++||+ |||++++++.++..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 45677777888899999999999999999999999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+...+.. +.+.+++++.+.+.+.+...+...+...|.+|++ +|++.+++
T Consensus 85 ~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~ 136 (395)
T PRK10054 85 SGFIAIPLVN----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST------SKTKIFSL 136 (395)
T ss_pred HHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHHH
Confidence 8877776655 5666777777777777777788889999999876 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
.+...++|..++|.+++++.+ .||+..|++.+++.++.++..
T Consensus 137 ~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 137 NYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999998764 689999988777666654433
No 10
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=6.7e-19 Score=160.85 Aligned_cols=179 Identities=12% Similarity=0.160 Sum_probs=156.0
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
..++.+..+.++.+++++--|.+.+.+ .-.++.+|+++...+++.+++++..++.+|++|+++||+ .|++++.+|..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 344556666677777777777766644 445678999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..+.++...++. .+|++.++|.+.|+|.+.+.+..+++++|.||.. +|++.+
T Consensus 108 W~~Av~~~~fs~----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~ 159 (493)
T KOG1330|consen 108 WTLAVFASGFSN----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVL 159 (493)
T ss_pred HHHHHHHHHHHH----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHH
Confidence 999999999887 8999999999999999999999999999999998 699999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHhc
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
+++|++..+|+.+|.+++.++.+..+ ||++|+..+++.++..++..+..
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 99999999999999999999888777 99999999988766655444433
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.77 E-value=2.4e-17 Score=153.91 Aligned_cols=175 Identities=13% Similarity=0.124 Sum_probs=144.2
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
+|+.++.+.+..+++......+ .+..+.+++++|++..+.+++.+++.++..+++++.|+++||+ |||+++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 4555555555555555544444 3444578899999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.++..++. +.+.+++.|++.|++.+...+....++.|++|++ +|++..+
T Consensus 84 ~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~~~ 135 (412)
T TIGR02332 84 GIASTATMFAT----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARANA 135 (412)
T ss_pred HHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHHHH
Confidence 99988888766 6788999999999999999988889999999987 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhheee------ccchhhhhhHhHHHHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQD------NIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+++....+|..+++.+++++.+ ..|||+.|.+.++..++..++..
T Consensus 136 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 136 LFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999887653 46999999987766554443333
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.77 E-value=3.2e-17 Score=151.69 Aligned_cols=174 Identities=9% Similarity=0.048 Sum_probs=143.4
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
|...+.+.+..++.....+.....+ +.+.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 4444444455555444444332333 456778999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.+.++. +.+.+.++|++.|++.+...+...+++.|++|++ +|++.+++
T Consensus 86 ~~~~~~~~~~----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~ 137 (390)
T PRK03545 86 ASHVLSALAW----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSL 137 (390)
T ss_pred HHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHH
Confidence 9988887766 7888999999999999888888899999999987 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+..+.++|..++|.+++.+.+..||++.|++.+++.++..+...
T Consensus 138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988889999999988776655544333
No 13
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.76 E-value=3.9e-17 Score=147.53 Aligned_cols=166 Identities=17% Similarity=0.304 Sum_probs=141.9
Q ss_pred HHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 022608 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (294)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~ 107 (294)
++..++..+........++.++.+++|.+..+.+++.+...++..++.++.|+++||+ |||+++.++.++..++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3445555666665666666588889999999999999999999999999999999998 999999999999988855555
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHH
Q 022608 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (294)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~i 187 (294)
++. +.+.+++++++.|++.+...+....++.|.+|++ +|++.++..+...++
T Consensus 81 ~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~ 132 (352)
T PF07690_consen 81 FAS----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSL 132 (352)
T ss_dssp HHC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHH
T ss_pred hhh----------------------hHHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhh
Confidence 433 5568899999999999999999999999999997 499999999999999
Q ss_pred HHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 188 AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 188 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
|..++|.+++++.+..+|++.|++.++..++..++
T Consensus 133 g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 133 GSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999999998999999999988877776654
No 14
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.75 E-value=9.4e-17 Score=147.86 Aligned_cols=159 Identities=16% Similarity=0.076 Sum_probs=123.6
Q ss_pred HhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 022608 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~ 115 (294)
..+..+ ....+.+++++|++..+.+++.+.+.+++.+++++.|+++||+ |||++++.+.+....+.+ .....
T Consensus 5 ~~~~~~-~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~----- 76 (368)
T TIGR00903 5 AIWVTF-SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP----- 76 (368)
T ss_pred HHHHHH-HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-----
Confidence 333433 3444555778999999999999999999999999999999998 999887665544444432 22221
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
.+...++++|++.|+|.+.. .......+|++|++ +|+++.++.+.+..+|..+++.+
T Consensus 77 ----------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~ 133 (368)
T TIGR00903 77 ----------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAA 133 (368)
T ss_pred ----------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 16788999999999999864 45556669999987 69999999999999999999999
Q ss_pred hhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 196 LVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 196 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++++.+.+|||+.|.+.+++.++..++...
T Consensus 134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999988899999998866665554444333
No 15
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.75 E-value=1.3e-16 Score=149.05 Aligned_cols=148 Identities=10% Similarity=0.139 Sum_probs=128.6
Q ss_pred hhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccc
Q 022608 49 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQE 128 (294)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 128 (294)
+.+++|.+..+.++..+.+.++..++++++|+++||+ |||++++.+.++..++.+++..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999998 999999999998888888877765
Q ss_pred ccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhh
Q 022608 129 ANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWG 208 (294)
Q Consensus 129 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~ 208 (294)
+.+.++++|++.|++.+...+....++.|.+|++ ++++.+++++...++|..++|.+++.+.+..||++.
T Consensus 103 ----~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~ 172 (413)
T PRK15403 103 ----SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVL 172 (413)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 7788999999999998876667778889999987 588889999999999999999999988888899999
Q ss_pred hhHhHHHHHHHHHHHHH
Q 022608 209 LGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 209 f~~~~~~~~~~~~~~~~ 225 (294)
|++.++..++..+..++
T Consensus 173 f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 173 FAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99887766655544333
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.75 E-value=1.5e-16 Score=145.90 Aligned_cols=175 Identities=17% Similarity=0.144 Sum_probs=144.9
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.+.++.+.+..+...+........+| .+++++|.+..+.+++.+...++..++.++.|+++||+ |||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34444444555555555555555554 45678999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.+.... +.+.+.+.+++.|++.+...+...+++.|.+|++ +|++.++.
T Consensus 82 ~~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 133 (385)
T TIGR00710 82 LSSLGLALSN----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSI 133 (385)
T ss_pred HHHHHHHHHc----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHH
Confidence 8888777665 6778889999999999999999999999999977 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.+....+|..+++.+++++.+..+|+..|++.++..++..+....
T Consensus 134 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 134 LMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999998877766555444443
No 17
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.75 E-value=1.7e-16 Score=147.64 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i 104 (294)
+.++...++...+.+.+.++++.|+++++|++..+.+++.+...+...+..+++|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5566788888899899999999999999999999999999999999999999999999998 999999999999998888
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
.+.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..++.+..
T Consensus 92 ~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~ 143 (400)
T PRK11646 92 TMAIAH----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQ 143 (400)
T ss_pred HHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHH
Confidence 776654 6778888999999999888888899999999887 599999999999
Q ss_pred HHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
.++|..+||.+++++. ..||++.|++.++..++..+.
T Consensus 144 ~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 144 DSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888 679999998877665554433
No 18
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.9e-16 Score=144.57 Aligned_cols=182 Identities=12% Similarity=0.102 Sum_probs=164.3
Q ss_pred cCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
.+..|..++.+.+..|+....=+...+.+|.- .+++|++...+++.++.+..+..++.|+-..+.||+ .||++++..+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence 35567778888888888888777776666554 578999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
.+++++.++.+++. +++.+.++|++.|+..|.+++...++.+++.|++ +|++
T Consensus 86 ~lFi~~n~l~alAp----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~~ 137 (394)
T COG2814 86 ALFIVSNLLSALAP----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG------KRGR 137 (394)
T ss_pred HHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chhh
Confidence 99999999999988 8999999999999999999999999999999999 6999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
+.+..+.+..+...+|..++.++.+.+|||.+|+..+.+.++.++..+...|
T Consensus 138 Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 138 ALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999988888777776666555
No 19
>PRK12382 putative transporter; Provisional
Probab=99.74 E-value=2.9e-16 Score=145.19 Aligned_cols=171 Identities=15% Similarity=0.101 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+.+.+..++..++.....+.+|.|+++++|+|..+.+++.+.+.+...+++++.|+++||+ |||++++.+.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHH
Confidence 445555566666666666777888899999999999999999999999999999999999998 9999999998877666
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
.+........+.. ...+.+.++++|++.|++.+...+...+++.|.+|++ +|++++++++
T Consensus 95 ~~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~~ 154 (392)
T PRK12382 95 GLAYLLAAILPVS--------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWNG 154 (392)
T ss_pred HHHHHhhhccccc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHHH
Confidence 5443332211110 0126778899999999999988888888999999887 5999999999
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~ 214 (294)
.+.++|..++|.+++++.+.+||+..+.+..+
T Consensus 155 ~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 186 (392)
T PRK12382 155 MAMYGALAAGAPLGLLLHSHFGFAALALTTMV 186 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence 99999999999999988888899976665444
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.74 E-value=2.5e-16 Score=145.14 Aligned_cols=173 Identities=12% Similarity=0.168 Sum_probs=146.1
Q ss_pred cCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
.+.+|+.+..+.+..+...+..+...... +.+++++|++..+.+++.+...++..++.++.|+++||+ |||++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVL-AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 35667777777777777777766665555 456788999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
++..++.+++.+.. +++.+++.|++.|++.+...+...+++.|.+|++ +|++
T Consensus 85 ~~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~ 136 (405)
T TIGR00891 85 VLFSAGTLACGFAP----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNK 136 (405)
T ss_pred HHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhH
Confidence 88888888777655 6788889999999999999999999999999987 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccc--hhhhhhHhHHHHHHH
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLS 219 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~~~ 219 (294)
..++++....+|..+++.+.+.+.+..+ |++.|.+.++..++.
T Consensus 137 ~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 137 ASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999888776655 998888765544433
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.74 E-value=1.8e-16 Score=151.53 Aligned_cols=179 Identities=12% Similarity=0.059 Sum_probs=144.9
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
|..+..+.+..++..+-...+...+|.. .+++|.+..+.+++.+.+.++...+.++.|+++||+ |||++++++.++..
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 3444444455555555444444445554 578999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+++..+. +.+.++++|++.|+|.+...+.....+.+.+++++ +|++++++
T Consensus 83 ~~~~~~~~a~----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~ 135 (495)
T PRK14995 83 LASLAAAFSP----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGV 135 (495)
T ss_pred HHHHHHHHcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHH
Confidence 9999888766 78899999999999999888877777878775432 69999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
+....++|..+||.+++++.+..|||+.|++...+.++.+++.....+
T Consensus 136 ~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 136 WAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999877665555444444333
No 22
>PRK10504 putative transporter; Provisional
Probab=99.73 E-value=2.6e-16 Score=149.06 Aligned_cols=178 Identities=13% Similarity=0.110 Sum_probs=149.5
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.+..+.+....++..+..+.+...+|.+.+ ++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 335666677777777777777787877765 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.+.+.. +.+.++++|++.|++.+...+....++.|.+|++ +|++..++
T Consensus 87 ~~~~~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 138 (471)
T PRK10504 87 LGSLFCALSG----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTF 138 (471)
T ss_pred HHHHHHHHhC----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHH
Confidence 8877766544 6778889999999999999999999999999876 58999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
++...++|..++|.+++++.+..||++.|++......+..+......+
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999998899999998877665555544444333
No 23
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.73 E-value=3.1e-16 Score=145.48 Aligned_cols=173 Identities=14% Similarity=0.141 Sum_probs=144.6
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.+|..+...+...+++.+..+......| .+.+++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 4566666666677777766665544444 45578999999999999999999999999999999998 999999999888
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+++.+.. +.+.+.+.|++.|++.+...+...+++.|.+|++ +|++.+
T Consensus 90 ~~~~~~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 141 (406)
T PRK11551 90 FGLFSLATAQAW----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTAV 141 (406)
T ss_pred HHHHHHHHHHhc----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHHH
Confidence 888777766655 6788889999999999999999999999999887 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++++....+|+.+++.+++.+.+..+|+..|++.+++.++..+
T Consensus 142 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 142 SLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888999998887665444433
No 24
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.73 E-value=2.9e-16 Score=142.40 Aligned_cols=173 Identities=14% Similarity=0.086 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
++...++..+........+|.|.. +++.+..+.+++.+...++..++.++.|+++||+ |||++++.+.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 345555666665556666777765 5799999999999999999999999999999998 99999999988887777666
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
......+ ..+.+.+++++++.|++.+...+...+++.|++|++ +|++.+++++...+
T Consensus 82 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 138 (365)
T TIGR00900 82 PFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRS 138 (365)
T ss_pred HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHH
Confidence 6543111 126788889999999999999999999999999987 59999999999999
Q ss_pred HHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+|..++|.+++++.+..||++.|++.++..++..+...
T Consensus 139 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 139 LFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888999999887765555544333
No 25
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.72 E-value=4.8e-16 Score=144.00 Aligned_cols=178 Identities=12% Similarity=0.029 Sum_probs=146.2
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+.++.+..+....+...++.......++.|+++++|.+..+.+++.+.+.+...+++++.|+++||+ |||++++.+.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCG 90 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHH
Confidence 3455667777778888888777788899999999999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+.+.+.....+. ...+...+++.|++.|++.+...+....++.|.+|++ +|++..
T Consensus 91 ~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 150 (399)
T PRK05122 91 CALSGLLYLLAGLLAAW--------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVI 150 (399)
T ss_pred HHHHHHHHHHhhhhhcc--------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccch
Confidence 87776665543211000 0114567889999999999999999889999999887 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHH
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (294)
+++....++|..+++.+++.+.+..||+..+++..+..+
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 998888899999999999988888899988776555443
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.72 E-value=6.5e-16 Score=143.58 Aligned_cols=158 Identities=13% Similarity=0.101 Sum_probs=130.8
Q ss_pred hHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 022608 37 AVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (294)
Q Consensus 37 ~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~ 116 (294)
....+...++. +++++|.+..+.++..+.+.++..++.++.|+++||+ |||++++.+.++..++.+......
T Consensus 28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------ 99 (406)
T PRK15402 28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ------ 99 (406)
T ss_pred hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc------
Confidence 33334444444 4578999999999999999999999999999999998 999999999988888887776655
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 022608 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (294)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~ 196 (294)
+.+.+++.|++.|++.+...+...+++.|.+|++ +|++..++.+....+|..++|.++
T Consensus 100 ----------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~ 157 (406)
T PRK15402 100 ----------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA------DAIKITALMANVALLAPLLGPLVG 157 (406)
T ss_pred ----------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999999999988888899999999887 477888888777788999999999
Q ss_pred hheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 197 VYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 197 ~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+++.+..+|++.|++.++..++..+...
T Consensus 158 ~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 158 AALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 9888888999999887776655554433
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.71 E-value=5.2e-16 Score=143.34 Aligned_cols=171 Identities=12% Similarity=0.117 Sum_probs=144.9
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++.+.+..++.....+...+.+|. +++++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 34555666666676766666666655 5678999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+++..+. +++.+++.|++.|++.+...+....++.|.++++ +|++.++.+
T Consensus 81 ~~~l~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 132 (382)
T PRK10091 81 GNAMFTLSS----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGM 132 (382)
T ss_pred HHHHHHHhC----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHH
Confidence 888887766 7888999999999999988888888889998876 588899999
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
..+..+|..+++.+++++.+..||++.|++.++..++..+.
T Consensus 133 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 133 VSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999888889999999887765554443
No 28
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=9.3e-16 Score=141.92 Aligned_cols=172 Identities=12% Similarity=0.093 Sum_probs=140.4
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
.+|..+.+....++..+........+|.+ .+++|+|..+.+++.+.+.++..++.++.|+++||+ |||++++++.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 45566666666666666655555555544 578999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+.+.... +.+.+++.|++.|++.+...+....+..|.++.+ +++...+
T Consensus 84 ~~~~~~~~~~~----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 135 (394)
T PRK11652 84 ILGTLVALFAH----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHANS 135 (394)
T ss_pred HHHHHHHHHHc----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHHH
Confidence 88887776654 6778889999999998887777778888888776 5888899
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
+++.+..++..++|.+++.+.+..||++.|++.++..++..+
T Consensus 136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888999999887665544433
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=99.71 E-value=1.5e-15 Score=139.33 Aligned_cols=173 Identities=12% Similarity=0.107 Sum_probs=140.2
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
.|+.+...+...+......+.. ....+++.+++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 3444444444445444444433 3445566678999999999999999999999999999999998 9999999998888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+++.... +.+.+++.+++.|++.+...+...+++.|.+|++ +|++..+
T Consensus 93 ~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~ 144 (398)
T TIGR00895 93 SVFTLLCALAT----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAVG 144 (398)
T ss_pred HHHHHHHHHcc----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhHh
Confidence 88877766654 6777888999999999999999999999999987 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
+++....+|..+++.+.+++.+..||+..|++.+++..+..++
T Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 145 LMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred hHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 9999999999999999999988899999888876544444333
No 30
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.71 E-value=6.7e-16 Score=145.08 Aligned_cols=161 Identities=16% Similarity=0.134 Sum_probs=135.9
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~ 108 (294)
+..++..+..+.+...++.+. +++|++..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++.+++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 107 (434)
T PRK11663 30 LGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGF 107 (434)
T ss_pred HHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHH
Confidence 334444444444455555554 57999999999999999999999999999999998 9999999999999888887777
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 022608 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (294)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig 188 (294)
.. +.+.+.+.|++.|++.|...+....++.|++|++ +|++.+++++...++|
T Consensus 108 ~~----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 108 SS----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTAHNVG 159 (434)
T ss_pred Hh----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHHHHHH
Confidence 65 6788888899999999988899999999999987 5999999999999999
Q ss_pred HHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 189 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
+.+++.+.+++.+.+||++.|++.++..++.
T Consensus 160 ~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 160 GALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999888899999998877654443
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.71 E-value=5.1e-16 Score=147.16 Aligned_cols=171 Identities=12% Similarity=0.216 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i 104 (294)
..+....++..+....... ..+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNV-AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHH
Confidence 3344444444444443433 44555678999999999999999999999999999999998 999999999999999888
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
++.... +.+.++++|++.|++.+...+...+++.|.+|++ +|+++.++++..
T Consensus 83 ~~~~~~----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~ 134 (485)
T TIGR00711 83 LCGVAP----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGLT 134 (485)
T ss_pred HHhCcC----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHHH
Confidence 877655 7788899999999999999999999999999987 599999999999
Q ss_pred HHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
..+|..++|.+++++.+..||++.|++.....++..+....
T Consensus 135 ~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 175 (485)
T TIGR00711 135 VLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFF 175 (485)
T ss_pred HHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999998877665555444433
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.71 E-value=1e-15 Score=142.98 Aligned_cols=166 Identities=13% Similarity=0.159 Sum_probs=141.6
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.+++......+..+...+..+.. .++.+++++++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34455555555555555555443 4455677789999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.++..++. +.+.++++|++.|++.+...+....++.|.+|++ +|++..
T Consensus 93 ~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~ 144 (426)
T PRK12307 93 YSVGTGLSGLAS----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKAS 144 (426)
T ss_pred HHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhh
Confidence 999988887766 7888999999999999999999999999999988 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHH
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~ 214 (294)
++++.+..+|..+++.+.+.+.+..||++.|++..+
T Consensus 145 ~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 145 AFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred hHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 999999999999999998888888899999987543
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.70 E-value=5e-16 Score=141.70 Aligned_cols=153 Identities=13% Similarity=0.203 Sum_probs=134.9
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 022608 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 122 (294)
+...+++++++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++..++.+++.+..
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 3444567889999999999999999999999999999999998 999999999998888888877765
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec
Q 022608 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (294)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~ 202 (294)
+.+.++++|++.|++.+...+....++.|.+|++ +|++.+++.+...++|..+++.+.+.+.+.
T Consensus 81 ----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 81 ----------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred ----------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 7888999999999999999999999999999987 599999999999999999999999988888
Q ss_pred cchhhhhhHhHHHHHHHHHHHH
Q 022608 203 IGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
.+|++.|++.++..++..+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 145 FSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred CCchHHHHHHHHHHHHHHHHhh
Confidence 8999999887776555444433
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.70 E-value=8.6e-16 Score=139.75 Aligned_cols=155 Identities=17% Similarity=0.149 Sum_probs=130.3
Q ss_pred HHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 022608 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (294)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~ 117 (294)
.|.. +.+.+++++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+...++.
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 4443 4456777889999999999999999999999999999999998 999999999999999998888776
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
+.+.++++|++.|++.+...+.....+.|.+|+ +|++..+++..+.++|..+++.+.+
T Consensus 90 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 90 ---------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred ---------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHH
Confidence 788899999999999988777777888888874 4899999999998999887666666
Q ss_pred heeeccchhhhhhHhHHHHHHHHHHH
Q 022608 198 YIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 198 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
.+.+..||++.|.+.++..++..+..
T Consensus 148 ~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 148 SVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 66667799999998877665554433
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.69 E-value=1.9e-15 Score=141.93 Aligned_cols=167 Identities=15% Similarity=0.162 Sum_probs=120.6
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcC---CCHHHHHH---HHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLH---MPLTKAAN---TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i 104 (294)
.+++.+-... .++..+++.++++ .+..+.+. +.+...++..++++++|+++||+ |||+++..+.+++.++.+
T Consensus 31 ~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 31 NLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 4444444443 4556667777774 55554333 34444555559999999999998 999999999999999988
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
+..++.++... ....+..+.+.|++.|+|.|+..+...++++|.+|++ +|++..+..+.+
T Consensus 109 ~~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~~~~~~~~ 168 (432)
T PRK10406 109 VIACLPGYETI--------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFYASFQYVT 168 (432)
T ss_pred HHhhcCCchhH--------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHHHHHHHHH
Confidence 87765411000 0113456889999999999999999999999999988 589999988888
Q ss_pred HHHHHHHHHHhhhhee--------eccchhhhhhHhHHHHHHH
Q 022608 185 MGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~ 219 (294)
.+.|..+++.+...+. ..+|||+.|++.++..++.
T Consensus 169 ~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 169 LIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 8888888776544332 2579999998876655443
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.69 E-value=2.2e-15 Score=143.52 Aligned_cols=167 Identities=13% Similarity=0.185 Sum_probs=140.9
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 97 (294)
+.+|+.+..+.+..++..+..+.. ..+.+++.+++|++..+.+++.+...++..++.++.|+++||+ |||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 345555555555555555555444 4445666788999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
+..++.+++.+.. +.+.+.+.+++.|++.+...+....++.|.+|++ +|++.
T Consensus 94 ~~~~~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~ 145 (496)
T PRK03893 94 LFSVGTLACGFAP----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKA 145 (496)
T ss_pred HHHHHHHHHHHHh----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHH
Confidence 8888888877765 7788899999999999999999999999999987 59999
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTF 214 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~ 214 (294)
.+.++...++|..+++.+.+++.+..+|++.|++..+
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 9999999999999999999999888999998876544
No 37
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.69 E-value=3.5e-15 Score=137.98 Aligned_cols=164 Identities=11% Similarity=0.092 Sum_probs=135.2
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~ 108 (294)
...+....+.......+|. +.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.++.+.++..++.+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHH
Confidence 3444444554444455544 4567999999999999999999999999999999998 9999999999888888877766
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH
Q 022608 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA 188 (294)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig 188 (294)
.. +.+.+++.|++.|++.+...+....++.|.+|++ +|++..++.+...++|
T Consensus 88 ~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~i~ 139 (392)
T PRK10473 88 AE----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGITCII 139 (392)
T ss_pred hC----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHH
Confidence 54 6677788999999999988888999999999987 5999999999999999
Q ss_pred HHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 189 ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 189 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
..++|.+++.+.+..||++.|++.+++..+..++
T Consensus 140 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 140 PVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 9999999888878889999888877665554443
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.69 E-value=2.5e-15 Score=137.11 Aligned_cols=159 Identities=15% Similarity=0.193 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
.+......++....++...+.+|.++++++|+|..+.+++.+...++..++.++.|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 45555666666777777777777789999999999999999999999999999999999998 99999999999998888
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+++.... .+.+.+++.|++.|++.+. .+...++++|++|++ +|++..+++..
T Consensus 82 ~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~------~r~~~~~~~~~ 133 (366)
T TIGR00886 82 LWAGLAV---------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKK------IQGTALGLAAG 133 (366)
T ss_pred HHHHHHh---------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHh------hhhHHHHHHHH
Confidence 7776543 0567788899999998664 456688999999987 59999999887
Q ss_pred HHHHHHHHHHHhhhheee----------ccchhhhhhH
Q 022608 184 VMGAAILVAVTVLVYIQD----------NIGWGWGLGI 211 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~----------~~g~~~~f~~ 211 (294)
..++|..+++.+.+.+.. ..+|++.|++
T Consensus 134 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 134 WGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 777777777766655433 3479988843
No 39
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.69 E-value=4.7e-15 Score=137.36 Aligned_cols=174 Identities=14% Similarity=0.028 Sum_probs=139.9
Q ss_pred Ccch-HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHH-----HHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHH
Q 022608 20 GMIT-MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-----AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT 93 (294)
Q Consensus 20 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~ 93 (294)
+|++ ...+....++..+++......++.|++ ++|++..+ .+++.+...+...++.++.|+++||+ |||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~ 88 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLL 88 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHH
Confidence 3443 455556777777877777788888875 58888654 37788889999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 022608 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (294)
Q Consensus 94 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
.+.++..++.+++.... +.+.+++.+++.|++.+ ..+....++.|.+|++ +
T Consensus 89 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~ 139 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQ----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRN------K 139 (408)
T ss_pred HHHHHHHHHHHHHHHHh----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh------h
Confidence 99888888877766654 67788889999998765 4566777888988877 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 174 rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
|++..+.++...++|..++|.+.+.+.+..+|++.|++.++..++..+...
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (408)
T PRK09874 140 SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL 190 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999988888999999888776655544433
No 40
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=3e-15 Score=142.89 Aligned_cols=176 Identities=11% Similarity=0.077 Sum_probs=125.8
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
+++.....+...++..+.+|++..++|.|+++.+|++..+.........++..++.+++|+++||+ |||+++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444455567788889999999999888999998888888888888889999999999998 9999988887654
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+.+.... ...+...+++++++.+++.+...+....++.|.+|++ .|++..+
T Consensus 327 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~------~Rg~~~g 381 (490)
T PRK10642 327 FVLAIPAFILI-------------------NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH------IRYSALA 381 (490)
T ss_pred HHHHHHHHHHH-------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc------cchHHHH
Confidence 44333322211 0113556667778778777777777788889999998 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSII 221 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~ 221 (294)
+.+....+++.++|.+.+++.+..+ |+..+++..+..++.++
T Consensus 382 ~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 382 AAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 7555556677888988888776544 55555444444444433
No 41
>PRK03699 putative transporter; Provisional
Probab=99.68 E-value=4.8e-15 Score=137.42 Aligned_cols=174 Identities=11% Similarity=0.131 Sum_probs=140.1
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+++|..+...+..++.....+.....++. +.+++|+|..+.+++.+...++..++.+++|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 44555666556666665555544444544 5678999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.++..+.. +.+.+++.|++.|++.+...+....++.|.+|++ +|+...
T Consensus 82 ~~i~~~l~~~~~----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~ 133 (394)
T PRK03699 82 MILAVAGLMFSH----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRL 133 (394)
T ss_pred HHHHHHHHHHcc----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHH
Confidence 888888777655 6778889999999999988888899999999876 588888
Q ss_pred HHHHHHHHHHHHHHHHhhhhee-eccchhhhhhHhHHHHHHHHHH
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQ-DNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~-~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
+..+....+|+.++|.+.+++. +..|||+.|.+.++..++..++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 8888888889999998887765 4579999998777655544433
No 42
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.68 E-value=4.4e-15 Score=147.01 Aligned_cols=151 Identities=15% Similarity=0.109 Sum_probs=126.9
Q ss_pred HHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 022608 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (294)
Q Consensus 42 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 121 (294)
...+.+++++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++++++++..++.+++.++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 34455667778999999999999999999999999999999998 999999999998888888877765
Q ss_pred CccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
+.+.++++|++.|+|.|+..+....+++|.+|++ .|+..+++++....+|.++++.++..+..
T Consensus 254 -----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~------~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 254 -----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE------KRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999987 69999999999999999998876544432
Q ss_pred c-------------cchhhhhhHhHHHHHHHHH
Q 022608 202 N-------------IGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 202 ~-------------~g~~~~f~~~~~~~~~~~~ 221 (294)
. .+||+.+++.++..++.++
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll 349 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIG 349 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHH
Confidence 2 3688877776665444433
No 43
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.68 E-value=2.4e-15 Score=139.53 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=128.8
Q ss_pred HHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 022608 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (294)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~ 117 (294)
++.....+ +.+++++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++..++.+...++.
T Consensus 25 ~~~~~~~l-p~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~------- 95 (393)
T PRK09705 25 LTSVGPLL-PQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP------- 95 (393)
T ss_pred hhccchhH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc-------
Confidence 34444444 456789999999999999999999999999999999998 999999999999999999998876
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
++..++++|++.|+|.+...+....++.|++| + +|+++.+.+..+.++|..+++.+.+
T Consensus 96 ---------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~------~~~~~~g~~~~~~~~g~~~g~~~~~ 153 (393)
T PRK09705 96 ---------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q------RTPLVMGLWSAALMGGGGLGAAITP 153 (393)
T ss_pred ---------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c------cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999998999999987 4 4899999999999999999999988
Q ss_pred heeecc-chhhhhhHhHHHHHHH
Q 022608 198 YIQDNI-GWGWGLGIPTFAMFLS 219 (294)
Q Consensus 198 ~l~~~~-g~~~~f~~~~~~~~~~ 219 (294)
++.+.. +|+..+.+.++..++.
T Consensus 154 ~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 154 WLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHH
Confidence 877765 7998776554443333
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.67 E-value=9.9e-15 Score=135.72 Aligned_cols=171 Identities=13% Similarity=0.154 Sum_probs=135.8
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+-||++.......++..+..+....+++.++ +++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4456667777777777777776777788887 56899999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+++.... . ...+.+.+.+.|++.|+|.+...+.....+.+.+|++ +|+++.
T Consensus 88 ~~~~~~~~~~~~-~-----------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~ 143 (402)
T TIGR00897 88 WCVGHAAFIVFG-L-----------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAV 143 (402)
T ss_pred HHHHHHHHHHHh-c-----------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHH
Confidence 888766543221 0 0115677778899999988877777777888888877 599999
Q ss_pred HHHHHHHHHHH-HHHHHhhhheeeccchhhhhhHhHHH
Q 022608 179 NWYYFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFA 215 (294)
Q Consensus 179 ~~~~~~~~ig~-~~~~~~~~~l~~~~g~~~~f~~~~~~ 215 (294)
++++.+.++|. .++|.+++++.+.+||+..++.....
T Consensus 144 g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 144 GWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999999996 57898888888888876555544433
No 45
>PRK11043 putative transporter; Provisional
Probab=99.67 E-value=4.9e-15 Score=137.40 Aligned_cols=159 Identities=16% Similarity=0.205 Sum_probs=130.8
Q ss_pred hHHhhHHHHHHH--hhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 022608 37 AVVGFNTNMISY--LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQ 114 (294)
Q Consensus 37 ~~~~~~~~l~~y--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~ 114 (294)
.+++...++|.+ +++++|.+..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++.++.....
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---- 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE---- 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc----
Confidence 333333444433 5678999999999999999999999999999999998 999999999888888877776655
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022608 115 LRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVT 194 (294)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~ 194 (294)
+.+.+++.|++.|++.+...+...+++.|.++++ ++++..+..+....+|..++|.
T Consensus 93 ------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 93 ------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred ------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999999998887777788999999887 5777888888888899999999
Q ss_pred hhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 195 VLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 195 ~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+++++.+.+||++.|++..+..++..+..+
T Consensus 149 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 149 LGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 999998889999999887766655544433
No 46
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.67 E-value=3.3e-15 Score=137.06 Aligned_cols=155 Identities=14% Similarity=0.165 Sum_probs=134.0
Q ss_pred hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
.+.+.++.+. +++|++..+.+++.+...++..++.+++|+++||+ |||+++..+.++..++.+.+....
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 3445666665 56899999999999999999999999999999998 999999999999888888877665
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
+.+.+.+.+++.|++.+...+...+++.|.+|++ +|++..++.+....+|..++|.+++.+
T Consensus 78 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 78 -------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999999999999899999999999887 599999999999999999999999998
Q ss_pred eeccchhhhhhHhHHHHHHHHHHHH
Q 022608 200 QDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
.+..+|++.|++.++..++..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 139 LVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHH
Confidence 8888999998887776655544433
No 47
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.67 E-value=5.9e-15 Score=140.40 Aligned_cols=175 Identities=9% Similarity=0.066 Sum_probs=130.4
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
+++.+.......++..+..+.+.. +.+++++++|++..+.+++.+...++..++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAP-LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 344444444545555555554433 34566789999999999999899999999999999999998 9999999998888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.++..+.. +.+.+++.|++.|++.+... ....+++|++|++ +|+++.+
T Consensus 112 ~~~~~~~~~~~----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~------~rg~a~g 162 (476)
T PLN00028 112 APAVFCMSLVS----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK------IVGTANG 162 (476)
T ss_pred HHHHHHHHHhc----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh------heeHHHH
Confidence 88877776655 66778888999999887654 3456789999987 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhhee----e-----ccchhhhhhHhHHHHHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQ----D-----NIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~----~-----~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
..+...++|+.+++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 163 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 163 IAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 988777777777765554332 1 258999999887766555444333
No 48
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=7e-16 Score=139.97 Aligned_cols=175 Identities=14% Similarity=0.083 Sum_probs=153.8
Q ss_pred chHHHHHHHHHHHHHhHHhhHHH---HHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTN---MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
|.-+.++...++...++|.+.-+ ..+++.++.++|.++.+.+.+.+.+.+.++-.+.|.++||. +.|..+.+++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLil 103 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHH
Confidence 34466777778888888876543 45788889999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..+..+++.++. +.+.+.+..++.|+.+|.-.|+....++.+++++| ||+..
T Consensus 104 sai~nil~Gfs~----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~ 155 (448)
T COG2271 104 SAIVNILFGFSP----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWW 155 (448)
T ss_pred HHHHHHHHhhhh----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceE
Confidence 999999999877 78888888999999999999999999999999995 99999
Q ss_pred HHHHHHHHHHHHHHHHhh--hheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 179 NWYYFVMGAAILVAVTVL--VYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++++.+.|+|+++.|.+. +++..+.+|+..|++++++.++..++.+.
T Consensus 156 siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 156 SIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred EEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 88888889999999999876554444333
No 49
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.67 E-value=5.4e-16 Score=147.08 Aligned_cols=174 Identities=10% Similarity=0.006 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHhHHhhH---HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFN---TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.+.++...++.....|... ....+.+++++|++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 105 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHH
Confidence 4444444444444444322 2234566789999999999999999999999999999999998 99999999888777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+...... |. ...+.+.+++.|++.|++.+...+....+++|++|++ +||+++++
T Consensus 106 ~~~~~~~~~~---------------~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a~gi 162 (467)
T PRK09556 106 ICMLGFGASL---------------GS--GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRFLGF 162 (467)
T ss_pred HHHHHHHHHH---------------hc--ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeeeEEe
Confidence 7666655431 00 1127888999999999999999999999999999998 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeecc---chhhhhhHhHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNI---GWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~---g~~~~f~~~~~~~~~~~~ 221 (294)
+..+.++|+.+++.+..++.... +|+..|.+.+++.++..+
T Consensus 163 ~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 163 WNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred eecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHH
Confidence 99999999999988876655432 588777776665544333
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=99.67 E-value=1.2e-14 Score=136.96 Aligned_cols=154 Identities=13% Similarity=0.044 Sum_probs=122.2
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+....++.+....+...+........+| .+++++|++..+.++..+.+.++..+++++.|+++||+ |||+++..+.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~ 100 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFL 100 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3444555566666666666555544454 45899999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
+.++.+++.... ...+++.+.++|++.|+|.|...+..++++.|..+++ ++...+
T Consensus 101 ~~~~~~l~~~~~-------------------~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~------~~~~~~ 155 (438)
T PRK10133 101 YALGAALFWPAA-------------------EIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES------SGHFRL 155 (438)
T ss_pred HHHHHHHHHHHH-------------------hcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh------hHHHHH
Confidence 999987764222 0126788999999999999999999999999875554 355567
Q ss_pred HHHHHHHHHHHHHHHHhhhhe
Q 022608 179 NWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l 199 (294)
+.++....+|..+++.+++.+
T Consensus 156 s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 156 NLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 788888888998888876543
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.66 E-value=6.9e-15 Score=134.53 Aligned_cols=169 Identities=11% Similarity=0.064 Sum_probs=130.8
Q ss_pred HHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHH-HHHHHHHHHHHH
Q 022608 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI-ASIIYQIGMICL 106 (294)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~-~~~~~~i~~i~~ 106 (294)
++..++..++.......++.|+++++|.+..+.+++.+.+.+...+.+++.|+++||+ ||||.++. +.++..++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456677777777788899999999999999999999999999999999999999998 99887665 444445555555
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh--HHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK--YFNWYYFV 184 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~--~~~~~~~~ 184 (294)
..+. +++.+++.+++.+.+.+...+....+..|..|++. |+. ..+..+..
T Consensus 82 ~~~~----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 133 (375)
T TIGR00899 82 AWNR----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQ 133 (375)
T ss_pred Hhcc----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHH
Confidence 5544 56777777888877777777777778888776552 433 35677777
Q ss_pred HHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.++|..++|.+++++.+..||++.|++.++..++..+..+.
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999988889999999887766555444433
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.66 E-value=1.4e-14 Score=135.34 Aligned_cols=172 Identities=12% Similarity=0.046 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
++.+....+...+.. ++...+.+.+++++|++..+.+++.+...++..+++++.|++.||+ |||+++.++.++..++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444445555555554 3444555677899999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+++..+. ...+++.+.+.+++.|+|.|..++..++++.+..|++ ++++..+..+.
T Consensus 83 ~l~~~~~-------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 137 (410)
T TIGR00885 83 FLFWPAA-------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQS 137 (410)
T ss_pred HHHHHHH-------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHH
Confidence 7765443 1126788889999999999999999999999998877 47888888888
Q ss_pred HHHHHHHHHHHhhhheee--------------------------ccchhhhhhHhHHHHHHHHHH
Q 022608 184 VMGAAILVAVTVLVYIQD--------------------------NIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~--------------------------~~g~~~~f~~~~~~~~~~~~~ 222 (294)
..++|..++|.+.+.+.. ..+|++.|.+.+++.++..++
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999988775532 136999998777655544333
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.65 E-value=1.8e-14 Score=132.91 Aligned_cols=155 Identities=14% Similarity=0.119 Sum_probs=133.9
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|.++.++...++..+....+.+.+|.|++ ++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45777778888888888878888888875 6899999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+...... +.+.+.++|++.|++.+...+.....+.+..+++ +|++.++.+
T Consensus 84 ~~~~~~~~~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 135 (381)
T PRK03633 84 GCAGLGLMV----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NRGRLLAAY 135 (381)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHH
Confidence 888777665 7788889999999999988887777778887776 599999999
Q ss_pred HHHHHHHHHHHHHhhhheeeccchh
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWG 206 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~ 206 (294)
+.+.++|..+|+.+.+.+.+...+.
T Consensus 136 ~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 136 MMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHhcccccccch
Confidence 9999999999999998887654333
No 54
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.65 E-value=9.7e-15 Score=131.27 Aligned_cols=166 Identities=17% Similarity=0.326 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 022608 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~ 105 (294)
.+....++..+..+......+.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 3445667777777777777777764 6799999999999999999999999999999998 9999999999999998888
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 022608 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (294)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 185 (294)
..... +.+.+.+.+++.|++.+...+...+++.|.+|++ +|++.+++.+...
T Consensus 81 ~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 132 (352)
T cd06174 81 LAFAS----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGF 132 (352)
T ss_pred HHHhc----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHH
Confidence 77765 6788899999999999999999999999999997 5999999999999
Q ss_pred HHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 186 GAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 186 ~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++|..+++.+.+.+.+..+|++.+++.++...+..+
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (352)
T cd06174 133 GLGALLGPLLGGLLAESLGWRWLFLILAILGLLLAL 168 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999998888899988887766555443
No 55
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.65 E-value=4.8e-15 Score=138.87 Aligned_cols=142 Identities=20% Similarity=0.294 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhH
Q 022608 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (294)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (294)
.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.++..... ...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 127 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA-------------------FALSV 127 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc-------------------cccch
Confidence 3389999999999999999999999999998 999999999999988888776544 12245
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhh---hheeeccchhhhhhH
Q 022608 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL---VYIQDNIGWGWGLGI 211 (294)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~---~~l~~~~g~~~~f~~ 211 (294)
+.++++|++.|+|.+...+....+++|.+|++ +|++.+++++.+.++|..+++.+. ....+..+|++.|++
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKA------LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChh------hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 68889999999999999999999999999988 599999999999999999999998 666677899999998
Q ss_pred hHHHHHHHHHH
Q 022608 212 PTFAMFLSIIA 222 (294)
Q Consensus 212 ~~~~~~~~~~~ 222 (294)
.++..++.++.
T Consensus 202 ~~~~~~~~~~~ 212 (481)
T TIGR00879 202 QLIPAGLLFLG 212 (481)
T ss_pred HHHHHHHHHHH
Confidence 65554444333
No 56
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.64 E-value=2e-15 Score=137.42 Aligned_cols=152 Identities=14% Similarity=0.163 Sum_probs=131.1
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
...+++++++|++..+.+++.+...++..++.++.|+++||+ |||+++..+.++..++.+++....
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 81 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------- 81 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence 344577889999999999999999999999999999999998 999999999999988888887766
Q ss_pred cccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-Hhhhheeec
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV-TVLVYIQDN 202 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~-~~~~~l~~~ 202 (294)
+.+.+++.+++.|++.+...+...+++.|.+|++ +|++..++.+.+.++|..+++ .+.+.+.+.
T Consensus 82 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 82 ---------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred ---------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 7788899999999999999999999999999987 599999999999999999999 566666677
Q ss_pred cchhhhhhHhHHHHHHHHHHHH
Q 022608 203 IGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
.+|++.|++.+++.++..+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHh
Confidence 8999998877765554433333
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.64 E-value=2.4e-14 Score=132.87 Aligned_cols=160 Identities=16% Similarity=0.092 Sum_probs=129.3
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++.+....++..+........++.. .++++.+..+.+++.+.+.+...++.+++|+++||+ |||++++++.++..++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 44555666666666554444445544 568899999999999999999999999999999998 9999999999988887
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
.+.+.... +. ++.|++.|++.+...|...+++.|++|++ +|+++.++.+
T Consensus 82 ~~~~~~~~----------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~ 130 (393)
T PRK11195 82 CLLMLFGI----------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWME 130 (393)
T ss_pred HHHHHHHH----------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence 77665543 22 67788999999999999999999999987 6999999999
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~ 216 (294)
...++|..+||.+++++.+. .|+..+.+.+...
T Consensus 131 ~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~ 163 (393)
T PRK11195 131 GSTIAAILLGTVLGGALADP-HAEAALAVCALIY 163 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 99999999999999988764 3665555544433
No 58
>PRK09952 shikimate transporter; Provisional
Probab=99.63 E-value=2e-14 Score=135.31 Aligned_cols=177 Identities=10% Similarity=0.066 Sum_probs=124.4
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhc--CCCHHHHHHHH-----HHHHHHHhhhHHHHHHHHHhhcchhHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL--HMPLTKAANTL-----TNFGGTGSLTPLIGAFVADAYAGRFWT 91 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr~~ 91 (294)
.+++..+..++..+++.+-...+....+.++.+++ +.++.. +++. ++..++..+++++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 44555555555566665555444334444555554 666653 4332 234455668888899999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 022608 92 ITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (294)
Q Consensus 92 l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (294)
++.+.+++.++.+++.++.++... .......+++.|++.|++.|+..+....++.|.+|++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~----- 157 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTI--------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN----- 157 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHH--------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC-----
Confidence 999999999998888876511000 0001235788999999999999999999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhhee--------eccchhhhhhHhHHHHH
Q 022608 172 TKTWKYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMF 217 (294)
Q Consensus 172 ~~rg~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 217 (294)
+|+...+..+.+..+|..++..+...+. ..+|||..|++.++..+
T Consensus 158 -~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 158 -KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 5899988888888888888876655443 25799999987766543
No 59
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.63 E-value=7.8e-15 Score=138.86 Aligned_cols=147 Identities=10% Similarity=0.134 Sum_probs=126.6
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 022608 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (294)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (294)
+++++..+.+.+.+.+.+++.++++++|+++||+ |||+++..+.++..++.++..... .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------~ 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------G 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH--------------------H
Confidence 6889999999999999999999999999999998 999999999988888777665432 0
Q ss_pred hhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec-cchhhhhh
Q 022608 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (294)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~ 210 (294)
.+.+.+++.|++.|++.+...+....+++|++|++ +|+++.++++.+.++|..+++.+.+++.+. .||+..|+
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~ 202 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFY 202 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehh
Confidence 14567888999999999999999999999999988 599999999999999999999999998887 49999999
Q ss_pred HhHHHHHHHHHHHHH
Q 022608 211 IPTFAMFLSIIAFLI 225 (294)
Q Consensus 211 ~~~~~~~~~~~~~~~ 225 (294)
+.++..++..++.+.
T Consensus 203 i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 203 VFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhHHHHHHHHHHHH
Confidence 887765555444433
No 60
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.63 E-value=3.5e-14 Score=131.67 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=130.1
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
+++..+..+...+.....++.+..++|.|+++++|++..+++.+.+...+...++.+++|+++||+ |||+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 334444444444444444555667889999989999999999888887777888899999999998 9999888776555
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.+......... +.+.+.+.+++.+++.|...+....+..|.+|++ +++..+
T Consensus 293 ~~~~~~~~~~~----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~ 343 (393)
T PRK15011 293 VCFYAGMLMAH----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATT 343 (393)
T ss_pred HHHHHHHHHHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHH
Confidence 54433332222 4455556666666666666666677888988853 888999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.++...++|..+++.+.+.+.+..||+..|++..+..+++++..+.
T Consensus 344 ~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 344 LYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9888899999999999999999889999988877777666655543
No 61
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=1.8e-14 Score=137.60 Aligned_cols=174 Identities=16% Similarity=0.121 Sum_probs=123.2
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHH-HHH-----HHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-AAN-----TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA 95 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~ 95 (294)
+..+...+..+++.+-+. +..+..+++.++++.+... ..+ +.++..++..+++++.|+++||+ |||+++.++
T Consensus 16 ~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 93 (490)
T PRK10642 16 KAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 344444455566555443 3445556777777533211 111 24667788889999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhh
Q 022608 96 SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTW 175 (294)
Q Consensus 96 ~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg 175 (294)
.+++.++.++++++.++..+ ....+..+.++|++.|+|.|+..+....+++|++|++ +||
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~--------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~Rg 153 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATI--------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KRG 153 (490)
T ss_pred HHHHHHHHHHHHhcccHHHH--------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CCc
Confidence 99999999988876511000 0001124788999999999999999999999999988 599
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhee--------eccchhhhhhHhHHHHH
Q 022608 176 KYFNWYYFVMGAAILVAVTVLVYIQ--------DNIGWGWGLGIPTFAMF 217 (294)
Q Consensus 176 ~~~~~~~~~~~ig~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 217 (294)
...++.+.+..+|..+++.+...+. ..+|||+.|++.++..+
T Consensus 154 ~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 154 FMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 9999888877778777765543321 35799999998665433
No 62
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.63 E-value=1.5e-14 Score=136.97 Aligned_cols=151 Identities=14% Similarity=0.180 Sum_probs=120.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCccccccccch
Q 022608 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL-PQLRPPPCEGEQVCQEANKG 132 (294)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 132 (294)
+.+..+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.+...+.... ... ...+..
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~-----------~~~~~~ 118 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSI-----------GPDNTG 118 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccc-----------cccchh
Confidence 88999999999999999999999999999998 99999999999988887766653200 000 000112
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe--------eeccc
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI--------QDNIG 204 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l--------~~~~g 204 (294)
....++++|++.|++.|...+...++++|++|++ +|++.++..+.+..+|..+++.++..+ .+..|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 192 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG 192 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 3567789999999999999999999999999988 599999999999999999888765433 24568
Q ss_pred hhhhhhHhHHHHHHHHHH
Q 022608 205 WGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 205 ~~~~f~~~~~~~~~~~~~ 222 (294)
||+.|++.++..++..+.
T Consensus 193 Wr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 193 WRYMFASEAIPALLFLML 210 (479)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999998876665554433
No 63
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.63 E-value=2e-14 Score=135.98 Aligned_cols=150 Identities=12% Similarity=0.078 Sum_probs=124.4
Q ss_pred HHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccc
Q 022608 46 ISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQV 125 (294)
Q Consensus 46 ~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 125 (294)
...+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.+++..+.
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------- 105 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS--------------- 105 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh---------------
Confidence 3455678999999999999999999999999999999998 999999999988888888776655
Q ss_pred cccccchhHHHHHH-HHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 022608 126 CQEANKGQVAILYV-SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (294)
Q Consensus 126 ~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g 204 (294)
+.+.+++ .|++.|++.+...+....++.+.++ + +|++..++.+.+..+|..++|.+.+.+.+.+|
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-R------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-h------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 5555544 4678899988766666778889886 3 49999999999999999999999999888899
Q ss_pred hhhhhhHhHHHHHHHHHHHHH
Q 022608 205 WGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 205 ~~~~f~~~~~~~~~~~~~~~~ 225 (294)
|++.|++.+++.++..+..++
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999988776655444333
No 64
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.4e-14 Score=131.61 Aligned_cols=181 Identities=17% Similarity=0.170 Sum_probs=148.6
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhc-chhHHHHH-HHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYA-GRFWTITI-ASII 98 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~l~~-~~~~ 98 (294)
-|.+|.+.+..++..+.-|++..|.|.|+.|..|+|..++++..+.+..+...+++++||+|||++ |||..+-+ .++.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 367888999999999999999999999999999999999999999999999999999999999998 77755443 3444
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+...... +.++.+..+..+.+|+-..+.+-.+.....|..|++ ..|++.
T Consensus 331 i~~~~~~~w~~~--------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~------AaGtA~ 384 (448)
T COG2271 331 ITASLVLYWLAP--------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK------AAGTAT 384 (448)
T ss_pred HHHHHHHHHcCC--------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh------hccchh
Confidence 444444444432 236777788888888888888878888889998887 589999
Q ss_pred HHHHHHHHH-HHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 179 NWYYFVMGA-AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 179 ~~~~~~~~i-g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
|...++..+ |..++....+++.+.+||...|.+..+..+++.+++++..
T Consensus 385 Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 385 GFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred chhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 998888888 8888888899999999999999887777766666555544
No 65
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.62 E-value=5.6e-15 Score=137.88 Aligned_cols=172 Identities=14% Similarity=0.188 Sum_probs=133.5
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
++...++..+........+|.+. ++++.+..+.+++.+...+...+++++.|+++||+ |||+++..+.++..++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 34445555555554555566665 46788999999999999999999999999999998 99999998887777766555
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
....... ..+.+.+++.+++.|++.+...+...+++.|.+|++ +|++..+..+...+
T Consensus 100 ~~~~~~~-----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 156 (417)
T PRK10489 100 ALNAFLP-----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVR 156 (417)
T ss_pred HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHh
Confidence 4321000 115677778899999988888888888999999887 58999999999999
Q ss_pred HHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
+|..+||.+++.+.+..+|++.|++.++..++..+..
T Consensus 157 ~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 157 LGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888899999888776655554433
No 66
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.62 E-value=5.2e-14 Score=134.74 Aligned_cols=143 Identities=17% Similarity=0.173 Sum_probs=115.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 022608 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (294)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
+.+..+.+++.+...++..++.+++|+++||+ |||+++.++.++..++.++..++.+. .+..+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~----------------~~~~~ 114 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGS----------------SPKSV 114 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCc----------------ccchH
Confidence 45667788999999999999999999999998 99999999999999888777664310 01113
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee------------
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD------------ 201 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~------------ 201 (294)
...++++|++.|++.|+..+..+.+++|.+|++ .|++..++++....+|..+++.+...+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~------~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 188 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKK------WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADE 188 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 678999999999999999999999999999998 59999999999999999888877653311
Q ss_pred -----------ccchhhhhhHhHHHHHHH
Q 022608 202 -----------NIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 202 -----------~~g~~~~f~~~~~~~~~~ 219 (294)
..+||+.|.+.++..++.
T Consensus 189 ~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 189 ASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred ccccccccchhcccHHHHHHHHHHHHHHH
Confidence 237999887766554443
No 67
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.62 E-value=8.7e-14 Score=130.78 Aligned_cols=179 Identities=13% Similarity=0.010 Sum_probs=129.8
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
|.++. ....+...+......+.+...+.+ ++|++..+.+++.++..+.+.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~-s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWI-SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 34443 334444455545555555566554 7999999999999999999999999999999998 99999999999988
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+.++...++... ...+++.+++.+++.|++ +...+.....++++||++ +||++.++
T Consensus 112 i~~~~~~~a~~~-----------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~------~rG~A~Gi 167 (462)
T PRK15034 112 IPCVWLGIAVQN-----------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA------KQGSALGI 167 (462)
T ss_pred HHHHHHHHHHcc-----------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh------HhHHHHHH
Confidence 888877765100 012788999999999998 667788899999999998 59999999
Q ss_pred HHHHHHHHHHHHHHhhhhee-----e-------------ccchhhhhhHhHHHHHHHHHHHHHh
Q 022608 181 YYFVMGAAILVAVTVLVYIQ-----D-------------NIGWGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
+....++|..+++.+.+.+. . ..+|+..+++..++.++..+..++.
T Consensus 168 ~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 168 NGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87666777766555443321 1 3346666666655555554444443
No 68
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.61 E-value=2.1e-14 Score=135.70 Aligned_cols=152 Identities=14% Similarity=0.110 Sum_probs=120.5
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
...+|++++ |++..+.+++.+...++..+++++.|+++||+ |||++++++.++..++.+.+.+...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------ 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------ 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc------------
Confidence 445677777 99999999999999999999999999999998 9999999999888888877765420
Q ss_pred cccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHH-HHHHhhhheeec
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL-VAVTVLVYIQDN 202 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~-~~~~~~~~l~~~ 202 (294)
...+.+.+++.+++.|++.+...+.....+.|++|++ +|++.+++++.+.++|+. .+|.....+...
T Consensus 116 ------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 116 ------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred ------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 0115667788899999999988888888899999887 599999999999998874 455543333233
Q ss_pred cchhhhhhHhHHHHHHHHH
Q 022608 203 IGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 203 ~g~~~~f~~~~~~~~~~~~ 221 (294)
.||++.|++.++..++..+
T Consensus 184 ~gw~~~f~i~~~~~~~~~~ 202 (452)
T PRK11273 184 NDWHAALYMPAFAAILVAL 202 (452)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 4899999887765554433
No 69
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.61 E-value=5.4e-14 Score=130.93 Aligned_cols=174 Identities=7% Similarity=-0.018 Sum_probs=139.2
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHH-HHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK-AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 97 (294)
+.|+....++++..+..-.-- ..++..+|+++++|++..+ .+.+.+++..++.++.+++|+++||+ |.|+++.++.+
T Consensus 23 ~~W~~~~~~lC~fGF~~e~R~-n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l 100 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQFRP-GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQAL 100 (511)
T ss_pred cchhHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 457655543333222111111 2355677888999999999 99999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
...+..+++.++. +...+.+.|++.|++.|... ....++..++|++ +|+++
T Consensus 101 ~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~ra 151 (511)
T TIGR00806 101 SFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQRA 151 (511)
T ss_pred HHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHHH
Confidence 9999998888876 78889999999999999999 8999999999998 59999
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhh---HhHHHHHHHHHHHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG---IPTFAMFLSIIAFL 224 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~---~~~~~~~~~~~~~~ 224 (294)
.+++..+..+|.++++.++++ ...+||+.-+. +......+++++.+
T Consensus 152 tsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 55678885433 33334444444433
No 70
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.60 E-value=1.2e-14 Score=142.53 Aligned_cols=200 Identities=14% Similarity=0.166 Sum_probs=147.6
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
.++.++..+....+......++.......++++++++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~ 108 (633)
T TIGR00805 30 KIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIM 108 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHH
Confidence 344444444444555555556666666777889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCC----------------CCCCCCCCc-----------ccccccc--chhHHHHHHHHHHHHHhccC
Q 022608 100 QIGMICLTISAILPQ----------------LRPPPCEGE-----------QVCQEAN--KGQVAILYVSLLLAALGSGG 150 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~----------------~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~~~l~g~g~g~ 150 (294)
.++.++.++...+.. .....|.+. ..|.... ...+..++++|++.|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 999998876542110 011223210 0222211 12356778999999999999
Q ss_pred cchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc----------------------chhhh
Q 022608 151 IRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI----------------------GWGWG 208 (294)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~----------------------g~~~~ 208 (294)
..+...+++.|.+|++ +|+...++++.+..+|..+|+++++++.+.+ +|+..
T Consensus 189 ~~~~~~~~i~d~~~~~------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 189 IFPLGISYIDDFAKSK------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred chhcCchhhhccCCcc------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 9999999999999998 5999999999999999999999988766432 26667
Q ss_pred hhHhHHHHHHHHHHHHHh
Q 022608 209 LGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 209 f~~~~~~~~~~~~~~~~~ 226 (294)
|++.+++.++..+.++..
T Consensus 263 Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 777666555544444333
No 71
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.60 E-value=6.7e-14 Score=132.74 Aligned_cols=176 Identities=13% Similarity=-0.003 Sum_probs=130.8
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++.+.+..++....+++...++|.|+++.+|++..++++......++..++.+++|+++||+ |||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 3466666777777777788888999999999999999999999999999999999999999998 998877665444433
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+........ ..+.....+.+++.|+..............|.+|++ .+|++.+..
T Consensus 337 ~~~~~~~~~--------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~------~~g~a~gi~ 390 (467)
T PRK09556 337 IFTLGVYQH--------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK------AIGVANGIK 390 (467)
T ss_pred HHHHHHHHh--------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh------hHHHHHHHH
Confidence 332222211 013444555666666544333333345667999987 599999999
Q ss_pred HHHHHH-HHHHHHHhhhheee------------ccchhhhhhHhHHHHHHHHHHHH
Q 022608 182 YFVMGA-AILVAVTVLVYIQD------------NIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 182 ~~~~~i-g~~~~~~~~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+...++ |+.++|.+.|++.+ ..||+..|++..++.+++++..+
T Consensus 391 ~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 391 GTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 998886 77899999999988 56899999887777766655544
No 72
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.59 E-value=4.1e-14 Score=133.10 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=123.8
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 022608 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (294)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~ 124 (294)
..+++++ .|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++......
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 4456665 599999999999999999999999999999998 99999999988888877765543200
Q ss_pred ccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhh-eeecc
Q 022608 125 VCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVY-IQDNI 203 (294)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~-l~~~~ 203 (294)
..+...+.+.+++.|++.+...+.....+.|++|++ +|++++++++...++|+.+++.+.+. +....
T Consensus 115 ------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 115 ------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS------ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred ------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc------cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 114566778899999999998888899999999988 59999999999999999998877664 43456
Q ss_pred chhhhhhHhHHHHHHHHHHH
Q 022608 204 GWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 204 g~~~~f~~~~~~~~~~~~~~ 223 (294)
+|+..|++.+++.++..+..
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFA 202 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 89999998777665544333
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.58 E-value=1.5e-13 Score=127.47 Aligned_cols=178 Identities=7% Similarity=-0.101 Sum_probs=130.2
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.+|.+....++...++..+.++++.|+++++|++..+.+++.+...+...+++++.|+++||+ |||+.++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3567777788888888888889999999999999999999999999999999999999999998 999999887666655
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+..........+.. .......+.+.+++.+++.+...+....+..|..++ ++..++..
T Consensus 81 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~ 138 (396)
T TIGR00882 81 LFAPFFIYVFGPLL--------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKA 138 (396)
T ss_pred HHHHHHHHHhhhHH--------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchh
Confidence 44332211100000 000233455667788888888888877777664221 34455666
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
....++|..++|.+++.+.+ .+|+..|++.++..++..+..
T Consensus 139 ~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 139 RMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred hhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence 67778999999999887765 589999988777665544333
No 74
>TIGR00898 2A0119 cation transport protein.
Probab=99.58 E-value=4.3e-14 Score=135.01 Aligned_cols=145 Identities=17% Similarity=0.249 Sum_probs=125.4
Q ss_pred HHhhhhcCCC---HHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 47 SYLTTQLHMP---LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 47 ~yl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
+.+.++++++ ..+.++..+++.++..++.++.|+++||+ |||++++++.++..++.++..++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 4456789998 89999999999999999999999999998 999999999998888888777665
Q ss_pred cccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
+++.+++.|++.|++.+...+....++.|.+|++ +|+...+.+..+..+|.++++.++..+.+
T Consensus 179 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 241 (505)
T TIGR00898 179 ---------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD-- 241 (505)
T ss_pred ---------cHHHHHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 7888999999999999999999999999999988 58999999888899999999988766543
Q ss_pred chhhhhhHhHHHHHHHHHHH
Q 022608 204 GWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 204 g~~~~f~~~~~~~~~~~~~~ 223 (294)
|++.|++.++..++..+..
T Consensus 242 -wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 242 -WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 9998888777655554443
No 75
>PRK15075 citrate-proton symporter; Provisional
Probab=99.58 E-value=1.4e-13 Score=129.30 Aligned_cols=173 Identities=14% Similarity=0.098 Sum_probs=121.2
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHH-HHHHHH-----HHhhhHHHHHHHHHhhcchhHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANT-LTNFGG-----TGSLTPLIGAFVADAYAGRFWTIT 93 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~G~laDr~~Grr~~l~ 93 (294)
+++....+++..+++.+-...+ ....+.++++++.+..+.+.. .+.... ...+++++.|+++||+ |||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 3445555555555555554444 445557778888877765433 222222 2246788999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhh
Q 022608 94 IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATK 173 (294)
Q Consensus 94 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
.+.++..++.+++.++.++..+ .......++++|++.|++.+...+....+++|++|++ +
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~ 150 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATI--------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG------R 150 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHH--------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc------c
Confidence 9999999998888775411000 0000124688999999999999998899999999998 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhe--------eeccchhhhhhHhHH
Q 022608 174 TWKYFNWYYFVMGAAILVAVTVLVYI--------QDNIGWGWGLGIPTF 214 (294)
Q Consensus 174 rg~~~~~~~~~~~ig~~~~~~~~~~l--------~~~~g~~~~f~~~~~ 214 (294)
|++..+++....++|..+++.+++.+ .+.+|||+.|++..+
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999998887777777776665543 246799999987543
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=3.3e-13 Score=125.18 Aligned_cols=175 Identities=9% Similarity=0.053 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhhcchhHHHH-HHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT-IASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~-~~~~~~~ 100 (294)
..+.+++..++.+++.......++.|+++++|+|..+.+++.+...+ ...++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 34555666788888888888899999999999999999999876655 44455555666 9998 9988755 4444444
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++..+..++. +.+.+.+.+.+.+...+...+....+..|..++++ +..+...++
T Consensus 94 ~~~~~~~~~~----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 147 (393)
T PRK15011 94 LACTLFAWNR----------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG----REAVMFSSF 147 (393)
T ss_pred HHHHHHHHhh----------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc----chHHHHHHH
Confidence 5555554444 45555444433333334556677777777665542 012445578
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.+.+.++|..++|.+++++.+.+||+..|++.++..++..+..+.
T Consensus 148 ~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 148 LRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 888899999999999999998899999998887765555444433
No 77
>PRK03699 putative transporter; Provisional
Probab=99.57 E-value=1.5e-13 Score=127.45 Aligned_cols=170 Identities=16% Similarity=0.128 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++.+.+..++.....+.+..++|.|+++.+|+|..+++.+.+.+.++..++.+++|+++||+ |||+.+.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 444455555666667778889999999999999999999999999999999999999999998 9999888777665555
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
..+..... +...+.+..++.|++.+...+....+..|..|.+ ++...++.+
T Consensus 285 ~~~~~~~~----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~ 335 (394)
T PRK03699 285 MYLFVNTD----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFIL 335 (394)
T ss_pred HHHHHHcC----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHH
Confidence 44433322 3333444556677777777777777778877654 455677777
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
...++|+.++|.+.+++.+..|++..+++..++..++++.
T Consensus 336 ~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 336 TCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 8889999999999999999899998888777766555443
No 78
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.56 E-value=1.7e-13 Score=124.54 Aligned_cols=185 Identities=14% Similarity=0.046 Sum_probs=149.8
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.++|+++... ..+...+..+.+.+.+..++++++|+|..|.+++..+..+...+..++-|.+.||+ |.|++..++.++
T Consensus 11 ~~~~~L~~S~-~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWLST-LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLL 88 (417)
T ss_pred chhHHHHHHH-HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHH
Confidence 3445555444 44555566666677888888999999999999999999999999999999999998 999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
.++-.+.++++. +..+++.+++..++.|++.+ ..+...+++++.||++ ++|.+.
T Consensus 89 ~~IP~~~~~~a~-------------------~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~------~qG~Al 142 (417)
T COG2223 89 LLIPCLGLAFAV-------------------TYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKE------KQGLAL 142 (417)
T ss_pred HHHHHHHHHHHc-------------------cCCchHHHHHHHHHHhcccc-eehcccccccccCChh------hhhHHH
Confidence 888888888776 23355788888889898765 4557789999999998 699999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccc---hhhhhhHhHHHHHHHHHHHHHhccceec
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIG---WGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (294)
+++- ..|+|..+...+++.+....| |+....+..+.+++..+.+++..+..++
T Consensus 143 GI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 143 GIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred HHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 9988 889999999999998888888 8988888877777766666665544433
No 79
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=2e-13 Score=126.44 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=129.2
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~ 110 (294)
..+..+.+.....+++.|+.+ .|++ ..+.....+.++..++.++.|++.||+ |+|+.+..+..+..++.+.+....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 334455566666778888764 4553 445556677778888999999999998 999999888877777766665543
Q ss_pred hcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 022608 111 ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAIL 190 (294)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~ 190 (294)
+.+.+.+..++.|++.+...+.......|.+|++ +|++..++++...++|..
T Consensus 301 ----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~ 352 (399)
T PRK05122 301 ----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLG 352 (399)
T ss_pred ----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHH
Confidence 4555667778889998888877777888888876 699999999999999999
Q ss_pred HHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcccee
Q 022608 191 VAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYR 231 (294)
Q Consensus 191 ~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
+++.+.+++.+..||+..|++.+++.+++++......++.+
T Consensus 353 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 353 ITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999988889999998888777766655554444333
No 80
>PRK09952 shikimate transporter; Provisional
Probab=99.56 E-value=3.7e-13 Score=126.72 Aligned_cols=180 Identities=16% Similarity=0.126 Sum_probs=127.8
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
++....++...++..+.+|...++++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 33444444566777788888889999999989999988766666666777788889999999998 99999888876655
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.+..... .......+.+..++.+++.+...+...++++|.+|++ .|++..++
T Consensus 328 ~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~------~r~tg~g~ 383 (438)
T PRK09952 328 LSAFPFFMALE------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS------YRYSGAGV 383 (438)
T ss_pred HHHHHHHHHHH------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc------hhHHHHhH
Confidence 54443333210 0012333444556667887777888899999999997 58888887
Q ss_pred HH-HHHHHHHHHHHHhhhheeecc--chhhhhhHhHHHHHHHHHHHHH
Q 022608 181 YY-FVMGAAILVAVTVLVYIQDNI--GWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 181 ~~-~~~~ig~~~~~~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.+ .+..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+.
T Consensus 384 ~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 384 GYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 44 445689999999999887643 3777776666666666555443
No 81
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=4.3e-13 Score=120.55 Aligned_cols=172 Identities=19% Similarity=0.250 Sum_probs=147.4
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhH-HHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITIASIIYQI 101 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~l~~~~~~~~i 101 (294)
..+.+....++..........+++.|+++.+|.+..+.+.......++..++.++.|+++||+ |||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 334444556666777777778888998887899999999999999999999999999999998 9999 99999888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+...... +.+.+.+..++.|++.+...+....++.|..|++ +|++.++.+
T Consensus 255 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 306 (352)
T cd06174 255 GLLLLALAP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPE------ARGTASGLF 306 (352)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH------HHHHHHHHH
Confidence 887776654 4667778888999999999999999999999986 599999999
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
+...++|..+++.+.+.+.+..+|+..+.+.+++.+++.+..
T Consensus 307 ~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 307 NTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999988899999988888776665544
No 82
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.1e-13 Score=130.71 Aligned_cols=158 Identities=15% Similarity=0.179 Sum_probs=138.8
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 022608 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (294)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (294)
+++++..+.+++.+.+..++.++++++|+++||+ |-|+++..+.++..+++++...+..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999999999999988762
Q ss_pred hhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec-cchhhhhh
Q 022608 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLG 210 (294)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~ 210 (294)
...+.+++.|+++|++.|...+....+.+.+.|++| |+++.+..+.+..+|.+++..++|++.+. .||+..|+
T Consensus 126 ~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY 199 (466)
T KOG2532|consen 126 IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFY 199 (466)
T ss_pred hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHH
Confidence 234477899999999999999999999999999995 99999999999999999999999999888 99999999
Q ss_pred HhHHHHHHHHHHHHHhccceeccCCC
Q 022608 211 IPTFAMFLSIIAFLIGYPLYRNLDPA 236 (294)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
+.+++..+..++++......+.+++.
T Consensus 200 ~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 200 VFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 99988777766665555444444444
No 83
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=3.9e-13 Score=122.93 Aligned_cols=159 Identities=13% Similarity=0.076 Sum_probs=124.4
Q ss_pred HhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 022608 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~ 115 (294)
........+++.|+++++|.+..+.+.+.....+...++.+++|+++||+ |||+++.++.++..+.........
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----- 286 (375)
T TIGR00899 213 GCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN----- 286 (375)
T ss_pred HHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH-----
Confidence 33344456788899888999999999888777777778889999999998 999998887765555444333333
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
+.+.+.+..++.|++.+...+....+..|..|++ +++..+.++...++|..++|.+
T Consensus 287 -----------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~g~~~ 342 (375)
T TIGR00899 287 -----------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGRVGWIIAGSV 342 (375)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 4555666677778888877777788888988764 6788999999999999999999
Q ss_pred hhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 196 LVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 196 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
.+.+.+..||+..|++.+++.+++.+...
T Consensus 343 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 343 GGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99998888999999888877666655543
No 84
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.55 E-value=8.6e-14 Score=126.98 Aligned_cols=146 Identities=12% Similarity=0.169 Sum_probs=119.6
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 022608 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 122 (294)
..+.+.+++++|++..+.+++.+...++..++.++.|+++||+ |||+++.++.++..++.+.. ...
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~------------ 85 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP------------ 85 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc------------
Confidence 3344556779999999999999999999999999999999998 99999999988877776655 333
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec
Q 022608 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN 202 (294)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~ 202 (294)
+.+.+++.|++.|+|.+...+..+..+.|.+++ +|++..+.++...++|..+++.+.+.+.+.
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567778899999999998888888888888864 489999999999999999999888877665
Q ss_pred c--chhhhhhHhHHHHHHH
Q 022608 203 I--GWGWGLGIPTFAMFLS 219 (294)
Q Consensus 203 ~--g~~~~f~~~~~~~~~~ 219 (294)
. +|+..|.+.++..++.
T Consensus 149 ~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLA 167 (355)
T ss_pred hhhhHHHHHHHHHHHHHHH
Confidence 4 3888877665544333
No 85
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=3.8e-13 Score=125.74 Aligned_cols=181 Identities=7% Similarity=-0.084 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+..+.+....++..++++.+.++++.|+++++|++..+.+.+.++..+...+++++.|+++||+ |||++++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4666677777788887778889999999999999999999999999999999999999999998 999999887665554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+..........+.. .........++.++.+.+.....+....+. +..++ +++..++..
T Consensus 89 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~g~~~g~~ 146 (420)
T PRK09528 89 LFGPFFIYVFAPLL--------------QYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVSR-------RSGFEYGRA 146 (420)
T ss_pred HHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHHh-------hccccchhh
Confidence 43322211100000 000111112222333332222222222222 11111 366677777
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
+...++|..++|.+++++.+ .+|+..|++.++..++.++..+..
T Consensus 147 ~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 147 RMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcc
Confidence 77889999999999888765 489988888776665555444443
No 86
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.53 E-value=7.6e-13 Score=127.11 Aligned_cols=135 Identities=17% Similarity=0.260 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHH
Q 022608 59 KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (294)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (294)
+.+++.+...++..++.++.|+++|++ |||++++++.+++.+|.++...+. +...+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~----------------------~~~~l~ 146 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP----------------------SWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh----------------------hHHHHH
Confidence 458999999999999999999999998 999999999999999999999987 889999
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec-cchhhhhhHhHHHHH
Q 022608 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMF 217 (294)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~ 217 (294)
++|++.|+|.|+.....+.+++|..|++ .||...+.+++...+|..++..+.....+. .+||..+.+..+..+
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEiap~~------~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~ 220 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIAPAH------IRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAV 220 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcCChh------hhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 599999999999999999996554444332 489977776665544
Q ss_pred HHHHH
Q 022608 218 LSIIA 222 (294)
Q Consensus 218 ~~~~~ 222 (294)
+..+.
T Consensus 221 ~~~~~ 225 (513)
T KOG0254|consen 221 ILALG 225 (513)
T ss_pred HHHHH
Confidence 44333
No 87
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.53 E-value=1.9e-12 Score=123.70 Aligned_cols=178 Identities=12% Similarity=0.074 Sum_probs=137.4
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh----cchhHH-H
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWT-I 92 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~-l 92 (294)
...+|+.+.++.+.+......+.....++.+++ +.|.|..+.+....+... .++.+++|+++||+ +|||+. +
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~l 84 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWL 84 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHH
Confidence 345667777888888888888877788888876 469999999886322222 36889999999995 288875 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 022608 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (294)
Q Consensus 93 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
+.+.++..++.+.+++.. +..+.+.+.+.+++.+++.+...+...++..|++|++
T Consensus 85 l~~~i~~~~~~~~~a~~~-------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~------ 139 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLE-------------------PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE------ 139 (491)
T ss_pred HHHHHHHHHHHHHHHHcC-------------------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------
Confidence 566666666666665543 1225677888888899999999999999999999987
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhheee-ccchhhhhhHhHHHHHHHHHHH
Q 022608 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 173 ~rg~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
+|++..++...+..+|..+++.+.+++.+ ..||+..|++.++..++..+..
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999998888887 5799999998877665554433
No 88
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=5.5e-13 Score=121.27 Aligned_cols=169 Identities=12% Similarity=0.064 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+.+....++..+.......+++.|. +++|.+..+.+.+.....++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444455555555556666675 46889999999999999999999999999999998 9999999888887777
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
.+.+.... ......+....++.+++.+...+..+.++.|.+|++ +|++..++++
T Consensus 284 ~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~------~~~~~~g~~~ 337 (377)
T TIGR00890 284 MAAMLFIP--------------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA------NSAANYGFLY 337 (377)
T ss_pred HHHHHHcc--------------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh------hhhhHhHHHH
Confidence 76655433 002233444556778888888888888999999988 5999999999
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
...++|+.++|.+.+.+.+..||+..|.+.+++.+++
T Consensus 338 ~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 338 TAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999899999888877665554
No 89
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=5.7e-13 Score=132.06 Aligned_cols=133 Identities=11% Similarity=0.009 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH
Q 022608 62 NTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL 141 (294)
Q Consensus 62 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (294)
....+..++..++.+++|+++||+ |||++++++.++..++.+++.+.. +...+++.+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~----------------------s~~~ll~~~ 655 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN----------------------SESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc----------------------cHHHHHHHH
Confidence 334556678889999999999998 999999999888888877766654 344455666
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++.+++.++..+...++++|++|++ .|++++++.+....+|++++|.+++++.+. +...+|++.+++.+++.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~------~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~l 728 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSD------KRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGL 728 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 6777777778888899999999998 699999999999999999999998877653 345566666665555544
Q ss_pred HHH
Q 022608 222 AFL 224 (294)
Q Consensus 222 ~~~ 224 (294)
+.+
T Consensus 729 l~~ 731 (742)
T TIGR01299 729 LAL 731 (742)
T ss_pred HHH
Confidence 443
No 90
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.52 E-value=8.2e-13 Score=137.86 Aligned_cols=156 Identities=12% Similarity=0.057 Sum_probs=123.3
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCH--HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.+.+..+++..++.++...+....+..++...++.+. ...+++.+++.+...++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3445555666666666655555556666666666654 4468888899999999999999999998 999999998877
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
.+++.++..+.. ...+.+.+++.|++.|++.+...+...++++|++|++ +|++++
T Consensus 87 ~~~~~~~~~~~~-------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~ 141 (1146)
T PRK08633 87 EVGLTLLIVLAY-------------------YLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRAN 141 (1146)
T ss_pred HHHHHHHHHHHH-------------------HHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhh
Confidence 666655544432 0115788899999999999999999999999999987 599999
Q ss_pred HHHHHHHHHHHHHHHHhhhheeec
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDN 202 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~ 202 (294)
++++.+.++|.++|+.+++++...
T Consensus 142 ~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 142 GLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999887664
No 91
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.52 E-value=2.5e-13 Score=124.26 Aligned_cols=166 Identities=14% Similarity=0.034 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+.+....++....++....+++.|+++++|++..+.+.......+...++.+++|+++||+ |||+.+..+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 456666677777788888888999999888999999999999999999999999999999998 9999887655444433
Q ss_pred H-HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH-
Q 022608 103 M-ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW- 180 (294)
Q Consensus 103 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~- 180 (294)
. ....... ...+.+.+....++.+++.+...+...+++.|.+|++ .|++..+.
T Consensus 299 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~~ 353 (394)
T TIGR00883 299 AVPLLMALL-------------------DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE------VRYTGASLA 353 (394)
T ss_pred HHHHHHHHh-------------------cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc------ceeeEeeeh
Confidence 2 2221111 0113455556667778888888889999999999987 48888886
Q ss_pred HHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTF 214 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~ 214 (294)
++....+|+.++|.+.+++.+..| |+..++..++
T Consensus 354 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 354 YNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 455667888899999999988887 7765555444
No 92
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.52 E-value=1.9e-12 Score=120.11 Aligned_cols=176 Identities=11% Similarity=0.002 Sum_probs=132.2
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+..+.+.+..++....+++...++|.|+++ +|++..+++...+.+.++..++.++.|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345555556666777888888999999976 799999999999999999999999999999998 999999888777766
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+...+.... . +...+. .++.|++.+...+.......+.+++++ .+++.++..
T Consensus 283 ~~~~~~~~~---~------------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~ 334 (393)
T PRK09705 283 GFCGFIWLP---L------------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFM 334 (393)
T ss_pred HHHHHHHcc---c------------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHH
Confidence 665443222 0 111121 234577777777777767777776432 589999999
Q ss_pred HHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHhc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
+...++++.++|.+.+++.+..| |...|.+.+++.++.++......
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998876 66777776666655554444433
No 93
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.51 E-value=1.3e-12 Score=119.24 Aligned_cols=153 Identities=13% Similarity=0.124 Sum_probs=113.9
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh----cchhHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFWTI-TIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~l-~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
..+.+.+++|+|.++.++.... .+...+ .+++|+++||+ +||||.+ +.+.++..+.+..+.+..
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~--------- 78 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV--------- 78 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC---------
Confidence 3344445789999999998655 333343 89999999996 4898875 555555555555554432
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
+..+.+.+....++.+++.+...+...+++.|++|++ +|+.+.++...+.++|..+++.+++.+
T Consensus 79 ----------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 79 ----------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1124555666666777888888889999999999887 599999999999999999999999888
Q ss_pred eeccc--------hhhhhhHhHHHHHHHHHHHH
Q 022608 200 QDNIG--------WGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 200 ~~~~g--------~~~~f~~~~~~~~~~~~~~~ 224 (294)
.+..| |+..|++.++..++..+..+
T Consensus 143 ~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 143 ASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 87777 99999888876665544433
No 94
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.51 E-value=1.4e-12 Score=124.30 Aligned_cols=149 Identities=19% Similarity=0.177 Sum_probs=113.5
Q ss_pred hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
....++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+++..+.++..++.+......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 3457789999889999999999999999999999999999999998 999998887766555544333221
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
....+.+.+..++.+....+..+..+.++.|.+|++ +|++.+++++...++|+.++|.+.+++
T Consensus 363 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 363 -----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE------QRAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred -----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH------HhhcccchhhhhhhHHHHHHHHHHHHH
Confidence 113333333333333333334567778889999987 599999999999999999999999999
Q ss_pred eeccchhhhhhHhHHH
Q 022608 200 QDNIGWGWGLGIPTFA 215 (294)
Q Consensus 200 ~~~~g~~~~f~~~~~~ 215 (294)
.+.+||+..+...+..
T Consensus 426 ~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 426 AQRLDLGTALASLSFS 441 (496)
T ss_pred hccCChHHHHHHHHHH
Confidence 9999988777554443
No 95
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=1.8e-12 Score=118.15 Aligned_cols=179 Identities=13% Similarity=0.035 Sum_probs=127.0
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHH-HHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-l~~~~~~~~ 100 (294)
+..+......++.....+....+++.|+++.+|.+..+.+.+.....++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4556666777777888888888999999999999999999999999999999999999999998 98861 111111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.......... .............+.+++.+ ..+....+..|.+|++ .|++..++
T Consensus 294 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATN---------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGN------IAGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhc---------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChh------HHHHHHHH
Confidence 22111111100000 00122233333333334444 6788899999999988 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 223 (294)
++...++|+.++|.+.+++.+..| |+..|.+.+++.+++.+..
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 9988887777666655444
No 96
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=3.2e-12 Score=118.21 Aligned_cols=174 Identities=10% Similarity=0.011 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
++......++.....+....++++|+++..|++..+++.+.....++..++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344445555555666667788898888899999999999999999999999999999998 887654 4444443433
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
..+.... .+.+.+.+..++.|++.+...+.....+.|..|+ .++++++.++.
T Consensus 285 ~~l~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~ 336 (390)
T PRK03545 285 LLLLPAA---------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSG 336 (390)
T ss_pred HHHHHHh---------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHH
Confidence 3322211 1455666677788888877777777778887664 38889999998
Q ss_pred HHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
..++|..+||.+.|++.+.+|++..|+..+++.+++++......
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999988887777766655443
No 97
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.50 E-value=3.9e-12 Score=118.28 Aligned_cols=167 Identities=13% Similarity=0.095 Sum_probs=127.4
Q ss_pred HHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh----cchhH-HHHHHHHHHHHH
Q 022608 28 FSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY----AGRFW-TITIASIIYQIG 102 (294)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~-~l~~~~~~~~i~ 102 (294)
+...+.+...+.....-+|.|+++ .|+|..+.+++..+... .+..+++|+++||+ +|||| .+.++.++..++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 445556666666667789999975 59999999998666654 68999999999997 26665 677777777766
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
...+.+.. +..+.+.+.+..++.++..+...+...+++.|++|++ +|+++.+...
T Consensus 82 ~~~l~~~~-------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~ 136 (402)
T PRK11902 82 IAAMAFCP-------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKV 136 (402)
T ss_pred HHHHHhcC-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHH
Confidence 66665542 1124566666666677888888899999999999987 5999999999
Q ss_pred HHHHHHHHHHHHhhhheeec-cchhhhhhHhHHHHHHHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~ 222 (294)
.+.++|..+++.+.+++.+. .||+..|++.++..++..+.
T Consensus 137 ~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 137 LGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999888887775 59999999877766554443
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.49 E-value=4.2e-12 Score=122.64 Aligned_cols=172 Identities=12% Similarity=0.028 Sum_probs=124.6
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
.|..++..+.+..+... .|++. .....+++++|+|..+.+++.++.. ....+.++.|+++||+ |+|++++++.++.
T Consensus 26 Rw~~lva~~~~~~~~g~-~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTSF-MYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 34333333333333333 33433 4556778899999999999887643 4456777899999998 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.++++++.. .. ...+.+.+++.+++.|+|.+...+.....+.++||. +||++.+
T Consensus 102 ~iG~ll~ala~~-~~---------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~G 158 (591)
T PTZ00207 102 CLGTLLFALTFQ-EV---------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVVA 158 (591)
T ss_pred HHHHHHHHHHhc-cc---------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHHH
Confidence 999998888630 00 012688899999999999998888888899999985 4899999
Q ss_pred HHHHHHHHHHHH-HHHhhhheeeccchhhhhhHhHHHHHHHH
Q 022608 180 WYYFVMGAAILV-AVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 180 ~~~~~~~ig~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (294)
+......+|+++ +++..+++. .+|+..|++.+++.++..
T Consensus 159 i~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ 198 (591)
T PTZ00207 159 IMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVG 198 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHH
Confidence 999999999975 555555544 356666666655544433
No 99
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=3.2e-12 Score=118.55 Aligned_cols=165 Identities=10% Similarity=-0.032 Sum_probs=124.4
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
+....++....++....++|.|+++ .|++..+.+.+.....++..++.++.|+++||+ |||+.+..+.+...++.+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 3344444555666677788888864 799999999999999999999999999999998 99999887666555554444
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
.... +.+.+.+..++.|++.++..+...++..|.+|++ .|++..++++....
T Consensus 303 ~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~ 354 (406)
T PRK11551 303 AAAP----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ------VRGTGVGAAVAVGR 354 (406)
T ss_pred HhcC----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh------hhhhhhhHHHHhhh
Confidence 3322 3444555566777777777888889999999988 59999999999999
Q ss_pred HHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHH
Q 022608 187 AAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSII 221 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~ 221 (294)
+|+.++|.+.+++.+..+ |...+++...+.+++.+
T Consensus 355 ~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAAL 390 (406)
T ss_pred HHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHH
Confidence 999999999999887654 44555555444444433
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.48 E-value=2.6e-12 Score=134.31 Aligned_cols=145 Identities=12% Similarity=0.003 Sum_probs=109.5
Q ss_pred hhhhcCCCH-HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH--HHHHHHHHHHHhhcCCCCCCCCCCccc
Q 022608 49 LTTQLHMPL-TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII--YQIGMICLTISAILPQLRPPPCEGEQV 125 (294)
Q Consensus 49 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~--~~i~~i~~~~~~~~~~~~~~~~~~~~~ 125 (294)
+++..+.+. ...++..+++.+...++++++|+++||+ |||+++...... ............
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~--------------- 105 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL--------------- 105 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 333344433 4467777888899999999999999998 999976432221 211211222211
Q ss_pred cccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccch
Q 022608 126 CQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 126 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
.+++.++++|++.|++.+...+...+++.|+++++ ++++++++.+++.++|.++||.+++++....||
T Consensus 106 ------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~ 173 (1140)
T PRK06814 106 ------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTFIAILLGTIIGGLATISGNF 173 (1140)
T ss_pred ------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 16788999999999999999999999999999998 599999999999999999999999999988899
Q ss_pred hhhhhHhHHHHHHHHH
Q 022608 206 GWGLGIPTFAMFLSII 221 (294)
Q Consensus 206 ~~~f~~~~~~~~~~~~ 221 (294)
++.|+..+++.+++++
T Consensus 174 ~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 174 VILVALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888444444443333
No 101
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.48 E-value=1.1e-12 Score=124.11 Aligned_cols=173 Identities=10% Similarity=0.029 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh-cchhHHHHHHHHHH--
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY-AGRFWTITIASIIY-- 99 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~l~~~~~~~-- 99 (294)
.++......++..+.++....+++.|+++ .|++..+++.+.+...++..++.+++|+++||. +++++..+++..+.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 44555555666677777777889999864 799999999999999999999999999999973 24444444333222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+++.... +.+.+++.+++.|++.+...+...+++.|.+|++ .+++.++
T Consensus 321 ~l~~ll~~~~~----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~------~~g~~~g 372 (455)
T TIGR00892 321 GLTHLLCALAG----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ------RFSSAVG 372 (455)
T ss_pred HHHHHHHHHhc----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH------HHhhHHh
Confidence 23333332222 5566777888899999999999999999999887 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhheeecc-chhhhhhHhHHHHHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNI-GWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+++...++|+.++|.+.+++.+.. +|+..|++.+++.+++.+...
T Consensus 373 ~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 373 LVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 999999999999999999998877 498888888876665554433
No 102
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.48 E-value=2.7e-12 Score=118.57 Aligned_cols=157 Identities=11% Similarity=-0.110 Sum_probs=115.9
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH-HHHHH-
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY-QIGMI- 104 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~-~i~~i- 104 (294)
+....++...++-...+++|.|++ ++|+|..+.+++.+...+...+++++.|+++||+ ||+........+. .+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHH
Confidence 444455555555556677888885 6899999999999999999999999999999998 9854332211111 11111
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
....+. +.+.+++.+++.+.+.+...+...++..|. . + +|++.++.....
T Consensus 87 ~~~~~~----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~~~~ 136 (382)
T TIGR00902 87 FSAGAH----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKVRLI 136 (382)
T ss_pred HHHhhh----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHHHHH
Confidence 111222 678888889888888888788777776543 2 2 478889999999
Q ss_pred HHHHHHHHHHhhhheeeccchhhhhhHhHHH
Q 022608 185 MGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 215 (294)
.++|..++|.+++++.+.+||+..|++..+.
T Consensus 137 ~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 137 GSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 9999999999999999999999988776554
No 103
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.48 E-value=1.6e-12 Score=122.90 Aligned_cols=177 Identities=15% Similarity=0.111 Sum_probs=121.6
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch--hHHH-HHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR--FWTI-TIASII 98 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--r~~l-~~~~~~ 98 (294)
+.++...+..++.....++...++|.|+++..|++..+++.+...+.++..++.+++|+++||+ ++ |+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 3455566666777777788889999999988999999999888888888889999999999997 43 3322 222223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
..++.+.+.... ..+.....++.++.|.+..........+..|.+|++ .||+.+
T Consensus 332 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~ 385 (452)
T PRK11273 332 VTIATIVYWLNP--------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAA 385 (452)
T ss_pred HHHHHHHHHHhc--------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh------hhhhHH
Confidence 333333222211 012333334444444443332333345677999987 599999
Q ss_pred HHHHHHHHHHHHH-HHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 179 NWYYFVMGAAILV-AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 179 ~~~~~~~~ig~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++.+...++|+.+ +|.+.+++.+..||+..|++.++..+++++....
T Consensus 386 g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 386 GFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999888888765 7999999999999999998887766666544443
No 104
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=2.6e-12 Score=119.05 Aligned_cols=166 Identities=11% Similarity=0.019 Sum_probs=125.1
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHH---HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~ 107 (294)
.++.......+..+++.|+.+..+.... ..+.+..+..++..++.++.|+++||+ |||+.+..+.++..++.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 3334444444556677787764433222 234455556677778888999999998 999999988877766665554
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHH
Q 022608 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA 187 (294)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~i 187 (294)
... +.+.+.+.+++.|++.+...+....++.+..|++ ++|+.++.++...++
T Consensus 307 ~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~ 358 (408)
T PRK09874 307 FVQ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDI 358 (408)
T ss_pred Hhc----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHH
Confidence 433 4566777788889999988888888888888876 589999999999999
Q ss_pred HHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 188 AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 188 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
|..+||.+++.+.+..||+..|++.+++.+++.+....
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888877766655444
No 105
>PRK12382 putative transporter; Provisional
Probab=99.48 E-value=1.8e-12 Score=119.82 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=126.1
Q ss_pred HHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 022608 32 VCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAI 111 (294)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~ 111 (294)
++....+..+..+++.|+++ .+++. .+.......++..++.++.|++.||+ |+|+.+..+..+..++.++.....
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc-
Confidence 33445555666777888764 46653 44555666677788899999999998 999999988887777776655433
Q ss_pred cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022608 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (294)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~ 191 (294)
+.+.+.++.++.|++.+...+.......|.+|++ +||+..++++...++|..+
T Consensus 301 ---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 301 ---------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ------VRGTALGGYAAFQDIAYGV 353 (392)
T ss_pred ---------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHH
Confidence 4455666778888888888888888888988877 5999999999999999999
Q ss_pred HHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 192 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
+|.+.+++.+..||+..|.+.+++.+++.+..+.
T Consensus 354 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 354 SGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888777666655443
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=2.3e-12 Score=120.73 Aligned_cols=177 Identities=9% Similarity=0.017 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCC--------HHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP--------LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
+.+++..++..........+++.|+++ .|.+ ....+.+.++..+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 334444555444444455667788754 4543 36668888888888899999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
++..++..++..... +....+.+++..++.|++.+...+....+++|.+|++ .|++
T Consensus 289 ~~~~v~~~l~~~~~~------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~ 344 (418)
T TIGR00889 289 VAWALRFGFFAYGDP------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRAS 344 (418)
T ss_pred HHHHHHHHHHHHcCc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHH
Confidence 888777655554220 0113455667788889998888888899999999988 5999
Q ss_pred HHHHHH-HHHHHHHHHHHHhhhheeec------cchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 177 YFNWYY-FVMGAAILVAVTVLVYIQDN------IGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 177 ~~~~~~-~~~~ig~~~~~~~~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
..++++ ....+|..+||.+.|++.+. +||+..|.+.+++.+++.+++++..
T Consensus 345 ~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 345 AQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999997 56789999999999998876 4689888887776666555544443
No 107
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.47 E-value=1.6e-13 Score=126.49 Aligned_cols=152 Identities=44% Similarity=0.832 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh
Q 022608 89 FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP 168 (294)
Q Consensus 89 r~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 168 (294)
.|+++++.+++++|.+++.++. .|... +...+.+.+++++.++++|.|+..+++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~- 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSL------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD- 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchh------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc-
Confidence 4789999999999999988887 33321 123356788999999999999999999999999999874
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccceecc-CCCCChhHH-HHHH
Q 022608 169 KQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNL-DPAGSPFTR-LLQV 246 (294)
Q Consensus 169 ~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 246 (294)
+++|.++++++|++.|+|+.+++.+.+++.+++||.+.|.++.+.++++++.++.++++++.. ++.+++..+ ...+
T Consensus 67 --~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~ 144 (372)
T PF00854_consen 67 --DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLV 144 (372)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHH
T ss_pred --hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHH
Confidence 237999999999999999999999999999999999999999999999999999999888877 566666555 3334
Q ss_pred HHHHHHhCcc
Q 022608 247 CVAAFRKRKL 256 (294)
Q Consensus 247 ~~~~~~~~~~ 256 (294)
.....+++..
T Consensus 145 ~~~~~~~~~~ 154 (372)
T PF00854_consen 145 LVAAFKKRKL 154 (372)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhhc
Confidence 4444444433
No 108
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.46 E-value=2e-12 Score=119.14 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=120.7
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
+.....+.+...+....+++.|+++++|++..+.+++.....++..++.++.|+++||+ |||+.+.++.++..+..+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33444444555556677889999989999999999999999999999999999999998 99999888776543322222
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
.... .+.+.+.+..++.++..+...+..+.++.|.+|++ .|++.++..+...+
T Consensus 322 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~ 374 (405)
T TIGR00891 322 FAIG---------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD------QRAAGLGFTYQLGN 374 (405)
T ss_pred HHhC---------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc------hhHHHhhHHHHHHH
Confidence 1111 13445555556666666677778889999999987 59999999999999
Q ss_pred HHHHHHHHhhhheeeccc-hhhhhhH
Q 022608 187 AAILVAVTVLVYIQDNIG-WGWGLGI 211 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g-~~~~f~~ 211 (294)
+|+.++|.+.+++.+..| |+..+..
T Consensus 375 ~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 375 LGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999888 7655443
No 109
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.46 E-value=1.4e-12 Score=125.44 Aligned_cols=140 Identities=14% Similarity=0.066 Sum_probs=124.2
Q ss_pred hhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 022608 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (294)
+..+.+.....+..+++.++..+|++++|+++||+ |||++++.+.++.+++.++.+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 45677888999999999999999999999999996 999999999999999998888877
Q ss_pred chhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhh
Q 022608 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG 210 (294)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~ 210 (294)
+++.+++.|++.|++.++...+...+++|+++++ .|+....+ ......++.+++..++++.. +||+.++
T Consensus 170 --~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 170 --NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred --cHHHHHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 8999999999999999999999999999999999 59988888 77777788888888888777 7999998
Q ss_pred HhHHHHHHHHHH
Q 022608 211 IPTFAMFLSIIA 222 (294)
Q Consensus 211 ~~~~~~~~~~~~ 222 (294)
+..+..++.++.
T Consensus 239 ~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 239 IISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHH
Confidence 877766655444
No 110
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=5.4e-12 Score=118.63 Aligned_cols=179 Identities=11% Similarity=-0.026 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch--hHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR--FWTITIASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--r~~l~~~~~~~~ 100 (294)
.++.+....++....++++.+++|.|+++++|++..+++...+.+.++..++.+++|+++||+.++ ++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 345455555566666677788999999888999999999999999999999999999999997222 232222211111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+....+.... . . +.....+..++.|++............+|.+|++ .|++..++
T Consensus 324 ~~~~~~~~~~---~----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~ 377 (434)
T PRK11663 324 LSVGSLWLMP---F----------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKE------AAGAATGF 377 (434)
T ss_pred HHHHHHHHcc---c----------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHh------hHHhHHHH
Confidence 1211111111 0 0 2222223333344433322333445668888876 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
.+...++|+.++|.+.+++.+.+||+..|.+.+++.+++.+..+.+.
T Consensus 378 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 378 VGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999998888777666555444433
No 111
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.45 E-value=3.8e-12 Score=118.76 Aligned_cols=157 Identities=6% Similarity=-0.069 Sum_probs=126.3
Q ss_pred HHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 022608 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (294)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~ 117 (294)
.+++..++|.|+++.+|.+....+++.+...++..++.++.+++.||. ++++.+..+.++..++.+++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345667889999888999999999999999999999999999999996 888888888777766666554433
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
+.+...++.++.|++.+...+...+++.|.+|++ .||+.+++++...++|..+|+.+.|
T Consensus 311 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 311 ---------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE------MLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH------HHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 4555666777788888777777788899999987 5999999999999999999999999
Q ss_pred heeeccchhhhhhHhHHHHHHHHHHH
Q 022608 198 YIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 198 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
++.+.+|++..+...+++.++..++.
T Consensus 370 ~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 370 GLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 99998888877776665544443333
No 112
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.45 E-value=2.1e-12 Score=120.90 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=125.3
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchhH-HHHHHHHHHHHHHHHH
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFW-TITIASIIYQIGMICL 106 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~l~~~~~~~~i~~i~~ 106 (294)
.+..++.+..+..+++.|+++++|+++.+++.+.++..+...+..|+.|+++||. +|||| .++.+..+..++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 3455666666778899999999999999999999999999999999999999983 38754 5667777777776666
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
.... +.. .....+.+.+.+++.+++.+....+..++..|..++.+ +|++..++.+...+
T Consensus 88 ~~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~ 146 (437)
T TIGR00792 88 FTTP---DFS-------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGAT 146 (437)
T ss_pred HhCC---CCC-------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHH
Confidence 5432 110 11234555666777788888888888888899875433 58888888888888
Q ss_pred HHHHHHHHhhhhee-------eccchhhhhhHhHHHHHHHHHHHH
Q 022608 187 AAILVAVTVLVYIQ-------DNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 187 ig~~~~~~~~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
+|+.++..+.+.+. +..||+..+.+.+++.++..++..
T Consensus 147 ~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 147 LGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICF 191 (437)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 88777665544332 245798888777766555544433
No 113
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=1.4e-12 Score=121.94 Aligned_cols=160 Identities=13% Similarity=0.052 Sum_probs=123.7
Q ss_pred HhHHhhHHHHHHHhhhhc---CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhc
Q 022608 36 LAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~ 112 (294)
..+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++||+ |||+.+..+.++..++..+..+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~-- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT-- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc--
Confidence 333334445677766543 56767888888888888889999999999998 999999988888888777666544
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH-HHHHHHHHHHH
Q 022608 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW-YYFVMGAAILV 191 (294)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~-~~~~~~ig~~~ 191 (294)
+.+.+.+.+++.+++.+...+....++.|.+|++ .+++..+. ++...++|..+
T Consensus 314 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 314 --------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHHHHHHHHHHH
Confidence 5566677788888888777777788889999887 47766654 67778899999
Q ss_pred HHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 192 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
++.+.|++.+..||+..|.+.+++.++..++.+
T Consensus 368 g~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 368 LSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887776655544333
No 114
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.45 E-value=1.1e-11 Score=115.39 Aligned_cols=176 Identities=13% Similarity=0.040 Sum_probs=127.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHH-HHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTIT-IASIIYQ 100 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~-~~~~~~~ 100 (294)
+.++......++....+++...++|.|++ ++|++..+.+.+.....++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34555566677777888888899998885 5899999999998999999999999999999998 9888764 3333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.+.+...... ...+.+.+.+..++.|++.+...+ ......|..|+ +|++.+++
T Consensus 300 ~~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-------~~g~~~g~ 354 (402)
T TIGR00897 300 IFTLALYYIPQH-----------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-------HKGAAMSV 354 (402)
T ss_pred HHHHHHHHHHHc-----------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-------hhHHHHHH
Confidence 332332221100 011345555666777877776544 34566676554 49999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
++...++|+.++|.+.+.+.+..||...+++.+++.+++.+...
T Consensus 355 ~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 355 LNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999888888877666554443
No 115
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.45 E-value=5.9e-13 Score=103.76 Aligned_cols=131 Identities=11% Similarity=0.178 Sum_probs=109.5
Q ss_pred HHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHH
Q 022608 66 NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAA 145 (294)
Q Consensus 66 ~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 145 (294)
...++..++.++.|+++||+ |||+.+..+..+..++.+...... +.+.+.+.+++.|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g 62 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFLQG 62 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHH
Confidence 44566778899999999998 999999999888888777666544 5677778889999
Q ss_pred HhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 146 LGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 146 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++.+...+....++.|.+|++ +|++..+..+....+|..+++.+.+.+.+..+|++.+++..+...+..+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 999988899999999999988 59999999999999999999999999888889998888877666555544443
No 116
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.43 E-value=1.2e-11 Score=117.36 Aligned_cols=186 Identities=15% Similarity=0.121 Sum_probs=149.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchh--HHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASI 97 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~l~~~~~ 97 (294)
+.|.+...++..++.+-+...+......|.++++|++..+...+..+.++...++++++|++.||+ |.| ++++++.+
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 345666666777778888888888999999999999999999999999999999999999999998 988 88888877
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
+..+..+...+.. .+... ...+.+.+++.-++.|+..|..++..-++.+|+.|+. +.+.+
T Consensus 358 ~~~~i~~~g~~G~-~~~~~-------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g------~e~ef 417 (477)
T PF11700_consen 358 LWIIIPLYGLFGF-WPSFF-------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG------REAEF 417 (477)
T ss_pred HHHHHHHHHHHHh-hhccc-------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc------hhhHH
Confidence 6643333322210 11100 0125677888788899999999999999999999998 68999
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHh
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
+++|.+.....+.+||++.+.+.+.+| .|+.+....++.+++++++...
T Consensus 418 Fgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 418 FGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999988877 7788887777777777666544
No 117
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.6e-11 Score=111.28 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++.+....+...+.. ..+..+.+.+++.++++..+++++...+..++.++++..|++.+|+ |+|+.++.|+.++++|
T Consensus 14 ~~v~~t~lFfl~G~~~-~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFIT-CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHh-hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 3344444445555543 3567788999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
..+.+-++ ....+..+.++.++.+.|.+..++..+++++.+.+++. ...-++..+
T Consensus 92 ~~lF~pAa-------------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q 146 (422)
T COG0738 92 AALFWPAA-------------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQ 146 (422)
T ss_pred HHHHhhhh-------------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHH
Confidence 98887554 22367888899999999999999999999999999863 444567777
Q ss_pred HHHHHHHHHHHHhhhheee
Q 022608 183 FVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~ 201 (294)
....+|+.++|++++++..
T Consensus 147 ~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 147 AFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HhhhhHHHHHHHHHHHHHH
Confidence 7888999999999887654
No 118
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.42 E-value=1.8e-11 Score=113.02 Aligned_cols=169 Identities=8% Similarity=-0.042 Sum_probs=139.3
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|.++......++.....+...++.+.|+++ .|.+..+.+.+.+...+...++.++.+++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 455666666677777777788899999965 899999999999988888888999999999998 999999999999988
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
..+...... +.+.+++..++.|+..+...+....++.+. |++ .+++..+.+
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~------~~~~~q~~~ 333 (382)
T TIGR00902 283 RWAIIGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS------EIAKLQALY 333 (382)
T ss_pred HHHHHHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh------hHHHHHHHH
Confidence 887776655 677888889999999999999999999987 766 478888887
Q ss_pred H-HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 182 Y-FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 182 ~-~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
+ ....+|..+++.++|++.+.+|+ ..|++.+++.++++++
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6 46789999999999999998886 5566666655555433
No 119
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.42 E-value=7.7e-13 Score=119.25 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=134.4
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccc
Q 022608 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANK 131 (294)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (294)
..+-...+.|++....-+...+.+++.|.+.||+ |+|-.+++|+.++...++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 3456678899999999999999999999999998 999999999999999999999987
Q ss_pred hhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhH
Q 022608 132 GQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGI 211 (294)
Q Consensus 132 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~ 211 (294)
++++++++|.++|+|.+...+...++++|.||++. +|++++|.......+|-.+||.++|.+-+..|.+..|.+
T Consensus 158 -sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlV 231 (464)
T KOG3764|consen 158 -SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLV 231 (464)
T ss_pred -hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHH
Confidence 78899999999999999999999999999999987 799999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 022608 212 PTFAMFLSIIAFLIGY 227 (294)
Q Consensus 212 ~~~~~~~~~~~~~~~~ 227 (294)
.++++++...+-++..
T Consensus 232 L~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHhee
Confidence 9888777655544433
No 120
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.42 E-value=9.4e-12 Score=114.92 Aligned_cols=156 Identities=12% Similarity=-0.030 Sum_probs=114.6
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchh----HHHHHHHHHHHHHHHHH
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF----WTITIASIIYQIGMICL 106 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr----~~l~~~~~~~~i~~i~~ 106 (294)
.++..+++..+.+++|.|++ ++|.|..+.+++.++..+...++++++|+++||+ ||+ +.+.++..+. .+..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHH
Confidence 33344445556677888885 5899999999999999999999999999999998 984 2222222111 1111
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
... ..+.+.+++.+++.|++.+...+...++..+. .+ +|++.++......+
T Consensus 88 ~~~---------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~-------~~~~a~~~~~~~~~ 138 (382)
T PRK11128 88 WFG---------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QK-------QIGLDYGKVRLWGS 138 (382)
T ss_pred HHh---------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh-------hccCCcchHHHHHH
Confidence 111 11678888889999999888888877777765 22 36666777777788
Q ss_pred HHHHHHHHhhhheeeccchhhhhhHhHHHHHHHH
Q 022608 187 AAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (294)
+|..+||.+++++.+++||+..|++.++..++..
T Consensus 139 lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 139 IAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 9999999999999999999998887766544443
No 121
>PRK15075 citrate-proton symporter; Provisional
Probab=99.42 E-value=9.9e-12 Score=116.79 Aligned_cols=152 Identities=11% Similarity=0.019 Sum_probs=107.4
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH-HH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC-LT 107 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~-~~ 107 (294)
...++....++.+..++|.|+++.+|++..++++......++..++.+++|+++||+ |||+++..+.++..+..+. ..
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 344456667778888999999988999999998888888888899999999999998 9999888765443322211 11
Q ss_pred HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH-HHH
Q 022608 108 ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMG 186 (294)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~-~~~ 186 (294)
... + ........+..++.+++.+...+....++.|.+|++ .|++..++.+. +..
T Consensus 324 ~~~--~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 324 WLV--A-----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATA 378 (434)
T ss_pred HHH--c-----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHH
Confidence 111 0 012222333344445666666666678899999998 58988888544 344
Q ss_pred HHHHHHHHhhhheeeccchh
Q 022608 187 AAILVAVTVLVYIQDNIGWG 206 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~g~~ 206 (294)
+++.++|.+.+++.+..|++
T Consensus 379 ~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 379 IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHhhhHHHHHHHHHHhcCCc
Confidence 46778999999998887753
No 122
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.42 E-value=1.8e-11 Score=113.00 Aligned_cols=154 Identities=12% Similarity=0.153 Sum_probs=117.0
Q ss_pred HhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 022608 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~ 115 (294)
..+....+++|.|+++ .|.+..+++...+...++..++.++.|+++||+ |+|+++..+..+..++.+... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~--~----- 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML--S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh--h-----
Confidence 3344445678888865 699999999999999999999999999999998 999999888777766654332 1
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 116 RPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
.. .......+.|++.+...+.....+.|..|++ +++...+.++...++|+.++|.+
T Consensus 285 -----------------~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 285 -----------------QA-AMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred -----------------hH-HHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1223445566666667788888888888776 46777777788889999999999
Q ss_pred hhheeeccchhhhhhHhHHHHHHHHHH
Q 022608 196 LVYIQDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 196 ~~~l~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
.|++.+.+||++.|.+.+.+.++..+.
T Consensus 341 ~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 341 TAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999999999998888776666544433
No 123
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.41 E-value=1e-11 Score=118.24 Aligned_cols=173 Identities=8% Similarity=0.006 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhH-----HHH--HHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-----TIT--IAS 96 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-----~l~--~~~ 96 (294)
.+.+.+..++.....+.+..++|.|+.+++|++..+++.+.....++..++.+++|+++||+ |||+ ... +..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 34444444444444556667889999888999999999999999999999999999999998 8762 222 222
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
++..++.+++.... +.+...+..++.+++.+...+...++..+..|. .+|.
T Consensus 333 ~l~~i~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~g~ 383 (476)
T PLN00028 333 TLGGVFCIWLGRAN----------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSRR-------SLGV 383 (476)
T ss_pred HHHHHHHHHhcccc----------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccChh-------hchh
Confidence 21111112111111 233333444455555555555555556665543 4899
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
..++.+...++|+.+++.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 384 ~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 384 ISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 999988888888888877654 22344688889888877777766555543
No 124
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=8.7e-12 Score=114.03 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=111.4
Q ss_pred HHHHHhhhhcC--CCHHHHHHHHHH-----HHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 022608 44 NMISYLTTQLH--MPLTKAANTLTN-----FGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLR 116 (294)
Q Consensus 44 ~l~~yl~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~ 116 (294)
+...++.++.. .++++.+.+.+. ..+...+++++.|+++||+ |||++++.+.++..++.+++.+..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 34445554443 444555444433 2223346789999999998 99999999999998888877765411100
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 022608 117 PPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (294)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~ 196 (294)
.......++++|++.|++.+...+....++.|.++++ +|++..+..+.+..+|..+++.+.
T Consensus 92 -------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 92 -------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred -------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc------cchHHHHHHHHHHHHHHHHHHHHH
Confidence 0011245788999999999999999999999999988 599999999999999999988776
Q ss_pred hhee--------eccchhhhhhHhHHHHHHHH
Q 022608 197 VYIQ--------DNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 197 ~~l~--------~~~g~~~~f~~~~~~~~~~~ 220 (294)
..+. +..+|++.|.+.++..++..
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 5442 35689998887666554443
No 125
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.40 E-value=9.8e-12 Score=119.70 Aligned_cols=151 Identities=11% Similarity=0.148 Sum_probs=116.0
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
....+..+++|-+ ....|+.....+...++.++.|.++|.+ |||+.++.+.++.++|.++.+.+.
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------- 129 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------- 129 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC-------------
Confidence 3345666777765 6667888889999999999999999998 999999999999999999998776
Q ss_pred cccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
+...++++..+.|+|.|... .....++|..|.+ .|.....+.....-+....++.++..+..+.
T Consensus 130 ---------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~ 193 (599)
T PF06609_consen 130 ---------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK------WRGLGLAIASIPFIITTWISPLIAQLFAAHS 193 (599)
T ss_pred ---------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc------hhhhHhHHHHHHHHhhhcccHHHHHHhccCC
Confidence 78889999999999977665 4566689999987 4666555544443344445666665555566
Q ss_pred chhhhhhHhHHHHHHHHHHHHH
Q 022608 204 GWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 204 g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
+|||.|++.++...++++...+
T Consensus 194 ~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 194 GWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred CcchHHHHHHHHHHHHHHHHHH
Confidence 8999999988876666544433
No 126
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.39 E-value=2.4e-11 Score=114.99 Aligned_cols=196 Identities=13% Similarity=0.095 Sum_probs=133.2
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHh----hcchhHHHHHH-HH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADA----YAGRFWTITIA-SI 97 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~l~~~-~~ 97 (294)
+++.+..+.+...+++-...+++++|+ +.+|.+....+.+..+..+...+.+|+.|+++|| + ||||.++.+ .+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 455666677777777777778888887 5799999999999999999999999999999995 6 999988875 55
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
...++.+++..+..+..+... ..-........+...++..+..++....+++..++++|.+|++++ +++.+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~-----~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a 153 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGD-----NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RTRIA 153 (477)
T ss_pred HHHHHHHHHHhCchhhhhccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HHHHH
Confidence 555555555543311110000 000000000113344455556677888888889999999998751 24678
Q ss_pred HHHHHHHHHHHHHHHHHhhhhe--eec-------------cchhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 178 FNWYYFVMGAAILVAVTVLVYI--QDN-------------IGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l--~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
.++.+...++|+.+|+.++++. .+. .+.+..|++.+++.++..++..+..++
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 9999999999999999887754 111 145678888777766665554443333
No 127
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=3.5e-11 Score=110.23 Aligned_cols=178 Identities=13% Similarity=0.107 Sum_probs=141.7
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.+..+..+.+.++...+.|...+++-+|+++..|++....+++..++.++..++.+++|+++|| +.|+++....++..
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 3456777788888888889999999999999999999999999999999999999999999999 68888888877777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+..+.+.+.. .+.+...+..++.|++..........-.++..|++ +....++
T Consensus 288 ~~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~-------~~~a~sl 339 (394)
T COG2814 288 LALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPDA-------ADLAGSL 339 (394)
T ss_pred HHHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCc-------hHHHHHH
Confidence 7666666544 14455555555667766654444444445533343 8888999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
+....|+|..+|..++|.+.+++|+....++.++..++++++.+...+
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999988888777665544
No 128
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=1.5e-11 Score=115.14 Aligned_cols=162 Identities=14% Similarity=0.054 Sum_probs=113.8
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcc
Q 022608 45 MISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQ 124 (294)
Q Consensus 45 l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~ 124 (294)
..+++.+++|++..+++.......++..++.+++|+++||+ |||+.+.++.++..++.+++........ ..
T Consensus 306 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------- 376 (481)
T TIGR00879 306 YSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-TG------- 376 (481)
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-CC-------
Confidence 33444467899998888888889999999999999999998 9999999988877777666653220000 00
Q ss_pred ccccccchhHHHHH-HHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc
Q 022608 125 VCQEANKGQVAILY-VSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 125 ~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
.........+. ...+..+++.+ ..+....++.|.+|++ .|++..+..+...++|+++++.+.+.+.++.
T Consensus 377 ---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~ 446 (481)
T TIGR00879 377 ---SSKSSGNVAIVFILLFIAFFAMG-WGPVPWVIVSEIFPLS------LRPKGISIAVAANWLANFIVGFLFPTMLESI 446 (481)
T ss_pred ---cccchhHHHHHHHHHHHHHHHcc-ccCeehhhhhccCChH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000122222 22222223322 3456667779999987 5999999999999999999999999988888
Q ss_pred chhhhhhHhHHHHHHHHHHHHH
Q 022608 204 GWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 204 g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
+|++.|++.+++.+++.+...+
T Consensus 447 ~~~~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 447 GVGGVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred CccceehhHHHHHHHHHHHHhe
Confidence 9998888877776666555443
No 129
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.39 E-value=2.9e-11 Score=113.61 Aligned_cols=167 Identities=16% Similarity=0.005 Sum_probs=107.5
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-H
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI-S 109 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~-~ 109 (294)
.++....+|++..++|.|+++.+|++..+.+....+..++..++.++.|+++||+ |||+.+.++.++..+..+.... .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677888899999999988999999998888888888888899999999998 9999887766544333322221 1
Q ss_pred hhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHH-H
Q 022608 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGA-A 188 (294)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~i-g 188 (294)
.. ..+.........+..++.+...+....+.+|.+|++ .|+++.++.+...++ +
T Consensus 331 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~------~r~t~~g~~~~~g~~~~ 385 (432)
T PRK10406 331 QN-------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQ------VRALGVGLSYAVANALF 385 (432)
T ss_pred Hc-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------ccchhhhHHHHHHHHHH
Confidence 10 001221111112222333333456678889999998 599999997765543 3
Q ss_pred HHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHH
Q 022608 189 ILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 189 ~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 224 (294)
+...|.+.+.+. ..| |...+++.++..+++++..+
T Consensus 386 g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 386 GGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHH
Confidence 445777777553 345 44445544444444444433
No 130
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.39 E-value=4.4e-11 Score=114.37 Aligned_cols=179 Identities=12% Similarity=0.031 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHH-HHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLT-NFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
+.+....++.....+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ |+|+.+.++.++..++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33343445555555556677888988889999999999874 55678889999999999998 99988877666555544
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+........ ..+...+.+..++..+..|...+...++..+..+++. .++.++..+.
T Consensus 304 l~~~~l~~~------------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s 359 (491)
T PRK11010 304 AGYWLLSIT------------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSA 359 (491)
T ss_pred HHHHHHHhc------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHH
Confidence 333222100 0123333334444444444445666788888888873 7788888888
Q ss_pred HHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
..++|..+++.+.|++.+.+||+..|.+.+++.+++++.....++
T Consensus 360 ~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 360 LSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999988889999999899999898888877777666555443
No 131
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=1.8e-11 Score=115.13 Aligned_cols=178 Identities=13% Similarity=0.099 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++.+....++.....+++.+++|.|+++..|++..++++......+...++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 344555566666677788889999999988899999999999999999999999999999998 7544333333222221
Q ss_pred HHHHH-HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 103 MICLT-ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 103 ~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
.+... ... .+ ..+.+......++.|++..+..........|.+|++ .|+++.+++
T Consensus 331 ~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~ 386 (438)
T TIGR00712 331 TIAVIVYWM-NP-----------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK------AAGTAAGFT 386 (438)
T ss_pred HHHHHHHHh-cC-----------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh------heeeehhhh
Confidence 11111 111 00 012232333344445443332223334567889987 599999999
Q ss_pred HHHHHHHH-HHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 182 YFVMGAAI-LVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 182 ~~~~~ig~-~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
+...++|+ +++|.+.|.+.+..||...|.+.+++.+++.+..+.
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 88888875 689999999999889998888777666555544443
No 132
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.3e-11 Score=114.39 Aligned_cols=145 Identities=14% Similarity=0.183 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHH
Q 022608 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVS 140 (294)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (294)
+.+++.+.++.++|+++.|+++||+ |||..++++.++..++.++..++... ....+++++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------~~~e~li~G 122 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------PSFEMLILG 122 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------hhHHHHHHH
Confidence 4567888999999999999999998 99999999999888888777776522 267889999
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh-hee-eccchhhhhhHhHHHHHH
Q 022608 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV-YIQ-DNIGWGWGLGIPTFAMFL 218 (294)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~-~l~-~~~g~~~~f~~~~~~~~~ 218 (294)
|++.|+..|......+.|+.|+.|++ .||......+++.++|..++..++. .+. +...|++.+.+..+..++
T Consensus 123 R~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 123 RLIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999 6999999999999999999966543 333 455698888887776555
Q ss_pred HHHHH--HHhcccee
Q 022608 219 SIIAF--LIGYPLYR 231 (294)
Q Consensus 219 ~~~~~--~~~~~~~~ 231 (294)
.++.. +.+.|++.
T Consensus 197 ~l~~l~~~PESPk~L 211 (485)
T KOG0569|consen 197 QLALLPFLPESPKYL 211 (485)
T ss_pred HHHHHhcCCCCcchH
Confidence 54433 33445543
No 133
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.35 E-value=5.2e-11 Score=107.20 Aligned_cols=161 Identities=12% Similarity=0.075 Sum_probs=119.5
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhh--cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQ--LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
..+...+..++....-.++.++++.|+.+. +|++..+++...+.+.++..++.++++++.||+ |+|+++.++.++.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 344433444443334556778899999753 799999999999999999999999999999998 99999888877777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.++..... ....+ .+.++.|++.+...|...+...+.+|++ .+++.+.
T Consensus 220 ~~~~l~~~~~----------------------~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-------~~~asai 269 (310)
T TIGR01272 220 LLSIGAALTH----------------------GYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-------TSQGSGI 269 (310)
T ss_pred HHHHHHHHcC----------------------CHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-------hhhhHHH
Confidence 6664443322 11222 3455778999999999999999988875 3333444
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 215 (294)
. ....+|+++.|.+.|.+.+..|.+.+|++..++
T Consensus 270 ~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 270 L-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred H-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3 466789999999999999988888887755443
No 134
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.34 E-value=3.6e-11 Score=112.39 Aligned_cols=164 Identities=8% Similarity=-0.034 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHH-HHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT-ITIASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-l~~~~~~~~ 100 (294)
..+......++....++++.+++|.|+++ ..+.+..+++.......++..++.+++|+++||+ |||+. +....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 34555666777788888899999999976 3477888999999999999999999999999998 87764 333333333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++.++. ... . +......+..+.++|.....+.......|.+|++ .|++++++
T Consensus 322 ~~~~~~-~~~-------------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~ 373 (412)
T TIGR02332 322 AGWLLA-SAT-------------------D--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAV 373 (412)
T ss_pred HHHHHH-Hhc-------------------C--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHH
Confidence 332211 111 0 1111122222333444333344445556777776 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFA 215 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~ 215 (294)
.+...++|+.++|.+.+.+.+..| |++.|++.+++
T Consensus 374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999988775 88888766553
No 135
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=5.8e-11 Score=112.49 Aligned_cols=157 Identities=10% Similarity=0.044 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.+...+...++..+.+.......|.|++..+|.+..++++......+...++.++.|+++||+ |||+++..+.++..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344455556666666555556678888878899999999998888888888889999999998 9999999888877766
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
..++.... ...+.+.+.+..++.|++.+...+....+..+.+|++ .++..+++++
T Consensus 341 ~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~ 395 (471)
T PRK10504 341 SLLFMLVA-------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN------LASSGNSLLS 395 (471)
T ss_pred HHHHHhcc-------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH------hccchHHHHH
Confidence 65554422 0112333444556667888887888888888988887 4999999999
Q ss_pred HHHHHHHHHHHHhhhheeeccch
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
....+|..+|+.+.+.+.+..|+
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999998877655544
No 136
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.34 E-value=1.3e-10 Score=110.13 Aligned_cols=178 Identities=16% Similarity=-0.003 Sum_probs=120.4
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHH--------H
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWT--------I 92 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~--------l 92 (294)
++.++.+.+..++....++.+.+++|.|+++.+|.+..+.++......++..++.+++|+++||+ ++|+. +
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 34567777888888888888899999999999999999999999999999999999999999997 64421 1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 022608 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (294)
Q Consensus 93 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
..+......+...+.... .. .......+...+.+.+.++..+.......|..|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 392 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY-LS------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR------- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHH-cC------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-------
Confidence 111111111111111111 00 0222333334444444454444444555566554
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhheeecc---chhhhhhHhHHHHHHHHHHHHH
Q 022608 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQDNI---GWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 173 ~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.+|...+..+...++|+.++|.+.+++.+.. +|...|.+.++..+++.+++..
T Consensus 393 ~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 4999999999999999999999999887643 3777888777666666555443
No 137
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.34 E-value=2.8e-11 Score=110.17 Aligned_cols=185 Identities=14% Similarity=0.049 Sum_probs=138.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+..|.+....+..--++.++..+++.|++++++.++.+++.+.....+...+..+++|+|+||+ |.+|++++....+++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 4455555555555556667788999999999999999999999999999999999999999998 999988888888777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+..++.... +. .....+....++..+..++..|.-+..+..++...+|.+ .|...++.
T Consensus 297 ~~~~l~~~~--~~-------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~v 354 (417)
T COG2223 297 AAALLSLFL--TG-------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIV 354 (417)
T ss_pred HHHHHHccc--cc-------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHH
Confidence 777666532 00 000123444444445556666666667778888888774 88889998
Q ss_pred HHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
....++|+..-|...+...+.+| +...|++...+.+++.++.+....+
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999888888888887777 7788888777777776655554433
No 138
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.34 E-value=6e-11 Score=102.88 Aligned_cols=169 Identities=14% Similarity=0.041 Sum_probs=134.0
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHH-HH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITI-AS 96 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~-~~ 96 (294)
+.....+|.+.++.++..++++=+.+.-+.++++.+|+|+..++.+.+...+...+.+++.|.++||+ |++-.... ++
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 45556788888888888888887778889999999999999999999999999999999999999999 98855444 45
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
+....+...+.+.. +.-+.+..+.|+..........+.++-..|++ +.|+
T Consensus 339 ~~tl~~H~~l~Ft~------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~------qLGT 388 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTF------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE------QLGT 388 (459)
T ss_pred HHHHHHhhhHHhhh------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH------Hhcc
Confidence 55666766666654 22344555667777777777888889999988 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccc---hhhhhhHhHHHHH
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIG---WGWGLGIPTFAMF 217 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g---~~~~f~~~~~~~~ 217 (294)
+++..+...|+|-.+.|++++.+.+.-| |--.|.+....+.
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~a 432 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMA 432 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999987655 3344544444333
No 139
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.33 E-value=1.4e-10 Score=111.32 Aligned_cols=181 Identities=14% Similarity=0.073 Sum_probs=140.1
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.+-.++...+..+++......-++-++. +..-|+...+++.....+-..+.++++|.++||+ .||++++.+-++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 34445556666666666555444544443 4577889999999999999999999999999998 999999999887766
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
..+.+.+.... ...+.+.+++..++.|++.+...|...+++.|+.|++ +...+.++.
T Consensus 88 ~~~~L~~l~~~-----------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~------~L~~A~al~ 144 (524)
T PF05977_consen 88 VALLLAVLAFF-----------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE------DLPAANALN 144 (524)
T ss_pred HHHHHHHHHHh-----------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh------hHHHHHHHH
Confidence 65555543311 1226788888889999999999999999999999987 488889999
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
+...|+...+||.++|.+....|-.+.|.+-++..++.++.+...+
T Consensus 145 s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 145 SISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999988888888888887776555544444333
No 140
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=3.3e-10 Score=105.27 Aligned_cols=169 Identities=10% Similarity=-0.113 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++......++.....+......|.|+++.+|++..+.+.......++..++.++.|+++||+ |+|+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444444445555555666678888888999999998888777788889999999999998 9999999988877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
..+........ ..+.+.+.++.++.|+|.+...+..........+ + .+|+..+.++
T Consensus 295 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~------~~g~~~~~~~ 350 (406)
T PRK15402 295 LLLAALATVIS-----------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-V------SKGTVSAAMG 350 (406)
T ss_pred HHHHHHHHHcc-----------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-c------cccHHHHHHH
Confidence 76665532000 1134455667778888888776665555544333 3 4999999999
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~ 216 (294)
+...+|..+|+.+.+++.+..++....+...+..
T Consensus 351 ~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 351 MLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 9999999999999999887777665444444333
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=6.1e-11 Score=107.42 Aligned_cols=153 Identities=12% Similarity=0.088 Sum_probs=123.0
Q ss_pred hHHHHHHHHHHHHHhHHhhH-HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFN-TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
.++.+....++....++... .+.|.|.++.+|.+..+.+.+.....++..++.++.+++.||+ |||+.+..+..+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 44445555555566655555 6677887777999999999999999999999999999999998 999998887666666
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+........ + +.+.+.+..++.|++.+...+....++.|.+|++ .|++..+.+
T Consensus 290 ~~~~~~~~~--------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~ 342 (365)
T TIGR00900 290 AILVVGLTP--------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAE------LLGRVFGAQ 342 (365)
T ss_pred HHHHHHhhc--------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHH
Confidence 655554433 1 2566677788889999999999999999999987 599999999
Q ss_pred HHHHHHHHHHHHHhhhheeecc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
+...++|..+++.+.+++.+.+
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999887654
No 142
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.32 E-value=9.6e-12 Score=111.70 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhH
Q 022608 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (294)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (294)
.+..-+|.+.+.++++..+.++.+|.++||+ |||++++++++..++...+.+.+. +.
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------~F 121 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------NF 121 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------HH
Confidence 3446678899999999999999999999999 999999999999888888887776 66
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
..+.++|++.|+.-|-.. ++.++++|.++++ .|+..++.+..+..+|-.+||.+++++..
T Consensus 122 ~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek------~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLS-VIRAIISDVVSEK------YRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCchH-HHHHHHHhhcChh------hccceeeeeehhhhcchhhcchhhhHHHh
Confidence 677788999999888654 6699999999998 49999999999999999999999999877
No 143
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.31 E-value=1.6e-10 Score=106.80 Aligned_cols=168 Identities=8% Similarity=0.032 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
.+..+...++.....+...+++++|+++.+|++..+.+.+.....++..++.++.|+++||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 33344444444455555566778888888999999999999999999999999999999998 99999988887777776
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
++..... + +.+...+..++.++|.+...+.......+..++.+ .++... .+.
T Consensus 280 ~~~~~~~-------------------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~ 331 (382)
T PRK10091 280 LMLFFFG-------------------G--MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE-----LLGAAG--GQI 331 (382)
T ss_pred HHHHHHH-------------------h--hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch-----HHHHHH--HHH
Confidence 5544322 0 22333444445555554444433333333333221 244433 355
Q ss_pred HHHHHHHHHHHhhhheeec-cchhhhhhHhHHHHHHHH
Q 022608 184 VMGAAILVAVTVLVYIQDN-IGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~ 220 (294)
..++|..+||.++|++.+. .+|+..+.+.++...+..
T Consensus 332 ~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 332 AFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 6789999999999988874 678888888776655444
No 144
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=2e-10 Score=107.17 Aligned_cols=143 Identities=15% Similarity=0.039 Sum_probs=105.1
Q ss_pred HHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 022608 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (294)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~ 117 (294)
.+.+..++|.|+++ .|++..+.+.......++..++.+++|+++||+ |||+.+..+.++..+..+.+....
T Consensus 247 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------- 317 (426)
T PRK12307 247 NWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------- 317 (426)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 33456778888875 699999999988888999999999999999998 999999888776655544433221
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
......+....+..+++..+..+..+.++.|.+|++ .|++..+..+....+|+.++|.+.+
T Consensus 318 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 318 -------------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE------VRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred -------------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH------HHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 001222222222223333344566778889999987 5999999999999999999999999
Q ss_pred heeeccchhhh
Q 022608 198 YIQDNIGWGWG 208 (294)
Q Consensus 198 ~l~~~~g~~~~ 208 (294)
++.+.+|+...
T Consensus 379 ~l~~~~g~~~~ 389 (426)
T PRK12307 379 WLGITMGLGAA 389 (426)
T ss_pred HHHHcccHHHH
Confidence 99888876543
No 145
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.30 E-value=2.4e-10 Score=105.55 Aligned_cols=166 Identities=8% Similarity=-0.009 Sum_probs=124.8
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++.+....++....+.....+++.|++ +.|++..+.+.+.+...+...+..++.|++.||+ |+|+.+..+.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 34455555555555666666777888985 5899999999998888888888889999999998 999999988888777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+...... +.+.+++..++.|++.+...+....+..+. +++ ++++..+.+
T Consensus 283 ~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~ 333 (382)
T PRK11128 283 RWGLMGSTT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS------EVIRLQALY 333 (382)
T ss_pred HHHHHHhhh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh------hhHHHHHHH
Confidence 766555444 667777788888998888888888887776 333 367778877
Q ss_pred H-HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 182 Y-FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 182 ~-~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
+ ....+|..+||.++|.+.+.+|+. .|+..+++.+++
T Consensus 334 ~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 334 SALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 5 456778889999999999988874 455444444333
No 146
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.30 E-value=6.8e-11 Score=113.10 Aligned_cols=154 Identities=8% Similarity=-0.031 Sum_probs=124.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.+.......++..+.+++...+++.|+++.+|.++.+++.......++..++.++.|++.||+ |+|+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3444455666666777777788899999999999999999999999999999999999999998 999999888888877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+++.... ...+.+......++.|+|.|...+.......+..|++ +++...+.+
T Consensus 338 ~~~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~g~~~~~~ 392 (495)
T PRK14995 338 SFYGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE------KAAAAGAIE 392 (495)
T ss_pred HHHHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH------hcchHHHHH
Confidence 776655432 1113444556677889999998888888888888877 599999999
Q ss_pred HHHHHHHHHHHHHhhhheee
Q 022608 182 YFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~ 201 (294)
++..++|+.+|+.+.+.+.+
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988876643
No 147
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.30 E-value=6.2e-11 Score=112.34 Aligned_cols=156 Identities=13% Similarity=0.084 Sum_probs=124.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++......++..+.+++...++|.|+++.+|++..++++......++..++.+++|++.||+ |||+.+.++.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3444455666677777788888899999999999999999999999999999999999999998 999999998887777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+..++.... . .....+.+....++.|+|.+...+.......+.+|++ .++++.+.+
T Consensus 334 ~~~~~~~~~-~-----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~------~~g~~~~~~ 389 (485)
T TIGR00711 334 GFYWRAFTF-T-----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPH------KIARGSSLS 389 (485)
T ss_pred HHHHHhccC-C-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHhHHHHHH
Confidence 776655221 0 1124455556677889998888777777778888876 599999999
Q ss_pred HHHHHHHHHHHHHhhhheeec
Q 022608 182 YFVMGAAILVAVTVLVYIQDN 202 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~ 202 (294)
+...++|+.+|+.+.+.+.++
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888876553
No 148
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1.6e-10 Score=109.73 Aligned_cols=151 Identities=13% Similarity=0.102 Sum_probs=122.5
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccc
Q 022608 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEA 129 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (294)
+++.++...+-+.+.+++.+++.++.+++|.|.||+ .-.+.+....++..+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 367788899999999999999999999999999998 866666655555444443333344
Q ss_pred cchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe------eecc
Q 022608 130 NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI------QDNI 203 (294)
Q Consensus 130 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l------~~~~ 203 (294)
+.+.+++.|++.|+..+...|....+++.+|.++ +|+..+++++.+..+|+++|.+++..+ ....
T Consensus 133 ---s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~------e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 133 ---SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS------ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred ---hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh------hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 7888999999999999999999999999999998 499999999999999999998887664 2356
Q ss_pred chhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 204 GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 204 g~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
|||+.|.+.+++.++..++.++..|.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecC
Confidence 89999999998776665554444443
No 149
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.27 E-value=5.4e-10 Score=104.71 Aligned_cols=164 Identities=10% Similarity=0.034 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch-hHHHHHHHHHHHHHHH
Q 022608 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQIGMI 104 (294)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~l~~~~~~~~i~~i 104 (294)
.+-...++...++-.+.++++.|+++++|++..+.+++.+...++..++++++|.++||+ || |+++.++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 344556666666666778999999999999999999999999999999999999999998 65 7777777776666665
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh--hhhhhhhhHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP--KQATKTWKYFNWYY 182 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~--~~~~~rg~~~~~~~ 182 (294)
+..+.. +.+.+.+.+++.+++.+...+...+...+...++.. .+.-.|.+.++
T Consensus 85 ~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G--- 139 (418)
T TIGR00889 85 FAAQVT----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG--- 139 (418)
T ss_pred HHHHhc----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh---
Confidence 555443 566777778888887666655544433221110000 00002333343
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
.+|.++++.+++.+.....|.+ |++.++..++.
T Consensus 140 ---~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~ 172 (418)
T TIGR00889 140 ---TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALL 172 (418)
T ss_pred ---hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHH
Confidence 3677788888777643333443 44444444333
No 150
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=1.3e-10 Score=105.73 Aligned_cols=162 Identities=13% Similarity=0.107 Sum_probs=115.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH--HH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI--IY 99 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~--~~ 99 (294)
+.++.+.+..++.....+.+..+++.|+++.+|++..+++.+.....++..++.++.|+++||..+||+....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 3445555666666777777888899999999999999999999999999999999999999986234433222111 11
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++........ ..+.....+..++.|+......+....+..|.+|++ .|++..+
T Consensus 296 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g 349 (379)
T TIGR00881 296 IVSLLVYWLNP--------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK------AAGTAAG 349 (379)
T ss_pred HHHHHHHhcCc--------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc------hhHHHHH
Confidence 11211111100 113334444555566655555566677889999987 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhh
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGL 209 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f 209 (294)
+++...++|+.++|.+.+.+.+.+||+..|
T Consensus 350 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 350 FVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999998988654
No 151
>PRK09669 putative symporter YagG; Provisional
Probab=99.27 E-value=1.1e-10 Score=109.99 Aligned_cols=170 Identities=11% Similarity=0.110 Sum_probs=117.5
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchh-HHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRF-WTITIASIIYQIGMI 104 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr-~~l~~~~~~~~i~~i 104 (294)
+..+..++.+..+..+++.|+++.+|++...++.+..+..+...+..|+.|+++||. +||| +.++.+.+...++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 445566666667778899999999999999999999999999999999999999993 3775 555566666666655
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
++... |... .....+.+++..++.+++......+..++.+|+.++.+ +|++..++....
T Consensus 96 l~f~~---p~~~-------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~ 154 (444)
T PRK09669 96 LTFYT---PDFG-------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFAL 154 (444)
T ss_pred HHHhC---CCCC-------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHH
Confidence 44332 2110 11234455555566676666777788899999876543 588888888888
Q ss_pred HHHHHHHHHHhhhheee-------ccchhhhhhHhHHHHHHH
Q 022608 185 MGAAILVAVTVLVYIQD-------NIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 185 ~~ig~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~~~ 219 (294)
.++|+.+++.+...+.. ..||+..+.+.+++..+.
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 88887777654433221 235666665555544443
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.27 E-value=2.1e-10 Score=105.18 Aligned_cols=147 Identities=14% Similarity=0.062 Sum_probs=112.1
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+.+....++....++....++| ++.+++|.+..+.+.+.....++..++.++.|+++||+ |||+.+....+..+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 344444555566677777777777 66678899999999999999999999999999999998 9985544433333333
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
.++..... +.+...+..++.|++.+...+...+++.|.+|++ .|++..++++
T Consensus 329 ~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~ 380 (398)
T TIGR00895 329 VLVGSTLF----------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTA------IRATGVGWAI 380 (398)
T ss_pred HHHHHHhh----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH------HHHHHHHHHH
Confidence 22222122 3455566677889999988999999999999987 5999999999
Q ss_pred HHHHHHHHHHHHhhhhe
Q 022608 183 FVMGAAILVAVTVLVYI 199 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l 199 (294)
....+|..++|.+.|++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999998865
No 153
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.26 E-value=5.3e-10 Score=103.43 Aligned_cols=174 Identities=15% Similarity=0.036 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.+..+...++.........++.+.|+++ .|++..+.+.+...... ...++.+++|++.||+ |+|+.+..+.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444455556666666666778888875 79999999998887765 5556789999999998 9999998877665333
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
........... .......++...++.+++.+...+...+...+..++++ .+++.++.++
T Consensus 288 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~ 346 (390)
T TIGR02718 288 ALLWFAQAAFW----------------LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQ 346 (390)
T ss_pred HHHHHHHHHcc----------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHH
Confidence 32222211000 00022333333444456666666777777777766522 5899999999
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHH
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (294)
...++|..++|.++|++.+..|++..|.+.+++.+++.
T Consensus 347 ~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 347 STRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 99999999999999999998899888887766555543
No 154
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.26 E-value=9e-10 Score=100.92 Aligned_cols=162 Identities=11% Similarity=0.070 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
.+...+...+....++....+.|.|+++++|+++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34444444455556666677778888888999999999999999999999999999999998 99999988877777776
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+++......+ ......+.+..++.|++.+...+.......|.+|. ++++..+.++.
T Consensus 287 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~ 342 (385)
T TIGR00710 287 VLLEITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-------VAGTASALFGT 342 (385)
T ss_pred HHHHHHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cchHHHHHHHH
Confidence 6655433100 01234445556677888888888888888888774 38888888877
Q ss_pred HHHHHHHHHHHhhhheeeccchhhhhh
Q 022608 184 VMGAAILVAVTVLVYIQDNIGWGWGLG 210 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~~~g~~~~f~ 210 (294)
....++.+.+.+.+.+.+..+|...+.
T Consensus 343 ~~~~~g~i~~~~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 343 LRLVLGAIVGYLVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHhccccChHHHHHH
Confidence 765544444444455555444544333
No 155
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.26 E-value=2.6e-10 Score=106.74 Aligned_cols=161 Identities=17% Similarity=0.110 Sum_probs=119.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|.++.++...++....++......+.|.+..++ +....+.+.....+...++.++.++++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 345555566666666666655555566655555 556677777778888889999999999998 999999999888777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh-hhhhhhhHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNW 180 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~ 180 (294)
+.+.+.+.. .+.+.+.+..++.+++.+...+...++++|..+.++-+ +++++|..++.
T Consensus 300 ~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 358 (437)
T TIGR00792 300 GYLIFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSV 358 (437)
T ss_pred HHHHHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHH
Confidence 766655432 13455566667788999988899999999987754311 12257999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccch
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
+++...+|..+++.+.+++.+..||
T Consensus 359 ~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 359 RTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999888766555
No 156
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.25 E-value=2.7e-10 Score=105.56 Aligned_cols=169 Identities=13% Similarity=0.094 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhc---CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
++.+....++....+.....+++.|+++.+ +.+....+.+.++..+...++.+..|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 333334444444444445556778877654 55666778888888888888899999999998 99999999888777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++..+..... +.+.+++..++.|++..........+..+..+++ .+++..+.
T Consensus 296 l~~~~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~at~~~~ 347 (396)
T TIGR00882 296 VRIIGSSFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR------LSATIYLI 347 (396)
T ss_pred HHHHHHHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------eEEEeehH
Confidence 7766555433 4555666777888876655555556667777766 36665554
Q ss_pred -HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 181 -YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 181 -~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++....+|+.+++.+.|++.+..||+..|.+.+++.++..+
T Consensus 348 ~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 348 GFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 66788999999999999999989999999887776655443
No 157
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.25 E-value=4.5e-10 Score=102.48 Aligned_cols=154 Identities=10% Similarity=-0.005 Sum_probs=115.2
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+..+.+....++....++....++|.|+++ .|++..+.+.+.+...++..++.++.|+++||+-+||+.+.++.++..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 344555555566677777888899999975 7999999999999999999999999999999972356666777777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+.+.... +.... ...++.|++.|...+...+.+.+..++++ +++...+..
T Consensus 276 ~~~~~~~~~----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~ 327 (355)
T TIGR00896 276 GLCGLLFAP----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMA 327 (355)
T ss_pred HHHHHHHhh----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHH
Confidence 766555433 11111 13456789998888877777766555432 578888888
Q ss_pred HHHHHHHHHHHHHhhhheeeccc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG 204 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g 204 (294)
+...++|..++|.+.|++.+..|
T Consensus 328 ~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 328 QSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888999999999999887765
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=1.1e-09 Score=103.89 Aligned_cols=156 Identities=13% Similarity=0.039 Sum_probs=108.1
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
+.|.++ +..|++.....+......+...++.+++|+++||+ |||+.++.+.++..++.+++......+
T Consensus 293 ~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~---------- 360 (479)
T PRK10077 293 YAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ---------- 360 (479)
T ss_pred HHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC----------
Confidence 334443 56888877777777777788889999999999998 999999999998888877766432100
Q ss_pred cccccccchhHHHHHHHHHHHHHhccC-cchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh-----
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGG-IRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV----- 197 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~----- 197 (294)
. .......+.++.+++.+. ..+....+++|.+|++ .|++++++.+...++|..+++.+.+
T Consensus 361 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~ 426 (479)
T PRK10077 361 -------A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA------IRGKALAIAVAAQWIANYFVSWTFPMMDKN 426 (479)
T ss_pred -------c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 0 111222233344444433 3366789999999987 5999999998888888888765544
Q ss_pred -heeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 198 -YIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 198 -~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++.+..+|+..|++.++..+++.+..+.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 427 SWLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred cchhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 3445678887887776655555444433
No 159
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.25 E-value=8.4e-11 Score=112.39 Aligned_cols=172 Identities=16% Similarity=0.143 Sum_probs=140.2
Q ss_pred HHHHHHHHHHhHHhhH---HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFN---TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
+.+..|+.++..+++. ..+-..+++.++.+..+++++.++...+..+..|+.+.+.||+ |.|.+++.|.++..+|+
T Consensus 47 V~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~ 125 (509)
T KOG2504|consen 47 VVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGL 125 (509)
T ss_pred eeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHH
Confidence 3444444444444433 2455667789999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH-HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
++..++. +.+.+++.. ++.|+|.|....+....++..|.+ +|+.+.+.-.
T Consensus 126 ~lssF~~----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-------kR~lA~Gia~ 176 (509)
T KOG2504|consen 126 LLSSFAT----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-------KRALATGIAV 176 (509)
T ss_pred HHHHHHh----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-------HHHHHHhhhh
Confidence 9999887 677776655 677999999999988999988887 4999999988
Q ss_pred HHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 183 FVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 183 ~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
.+..+|..+-|.+.-++.+.+|||..+++...+.+-.++.....+|
T Consensus 177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8888888888888889999999999988887776555555555444
No 160
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=1.3e-09 Score=101.23 Aligned_cols=164 Identities=11% Similarity=0.018 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++......++.....++...++++++.+++|++..+.+.......++..++.++.|++.||. +++..+. +.++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~-~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAG-APLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHH-HHHHHHHH
Confidence 344444444444455555556665555567899999999999999999999999999999995 5554444 33333333
Q ss_pred -HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 103 -MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 103 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
.++..... +.+.+.+..++.|++.+...+....++.+..|++ .++..+.+
T Consensus 295 ~~~l~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 345 (394)
T PRK10213 295 ALVLTLWGS----------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQ 345 (394)
T ss_pred HHHHHHHhh----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHH
Confidence 33322222 4556666778889999988888888888888753 55556666
Q ss_pred HHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (294)
+...++|..+|+.++|++.+..|++..+...+++..
T Consensus 346 ~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 346 VAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 677789999999999999998888877777665443
No 161
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.23 E-value=5e-10 Score=106.48 Aligned_cols=171 Identities=11% Similarity=0.122 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc-----hhHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RFWTITIASII 98 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~l~~~~~~ 98 (294)
...+....+.+.+. +.....++.++++++|++.++.+...+...+...+-.+ +|+++||+ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 33444567778888 77777888999989999999999998888888887555 99999998 7 77777777655
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
.. ......+.. . ........+.+++.+++.+......-++..|..+ +++ +.++...
T Consensus 105 ~~-~~~~~~l~~-~------------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~ 160 (468)
T TIGR00788 105 GS-AILYGLLPG-K------------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLV 160 (468)
T ss_pred HH-HHHHHhccc-c------------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCee
Confidence 42 111121211 0 0122333346778899999999999999999998 431 1344556
Q ss_pred HHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 179 NWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
++.+.+.++|..+++.++|++.+.++|+..|++.+++.++..+
T Consensus 161 s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 161 SWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 6677777899999999999999989999999888777665543
No 162
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.23 E-value=6.1e-10 Score=104.92 Aligned_cols=185 Identities=13% Similarity=0.086 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..|.+.++.++..-++.++..++|.|+++.+ +............+...+..+++|+++||+ |+++++.++.+...++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 4555555666666666667678999988755 333333344556677888999999999998 9999999998877776
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCC-----------CC----
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE-----------TD---- 167 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-----------~~---- 167 (294)
........ |.- ...+.+.+.+..++..++.|.-++.+..++.+.||+ ++
T Consensus 330 ~~~~~l~l--p~~--------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 330 SALLFLTL--PGT--------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHHHh--ccc--------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 64443322 210 012455555555665677777777888888888874 10
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHh
Q 022608 168 PKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 168 ~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
...+++.|...|+......+|+++-|.+.+...+.+| +...|+...+..+++.++-+..
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0112357788888888889999999988776665544 6677777777666665554443
No 163
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=1.7e-10 Score=105.31 Aligned_cols=174 Identities=14% Similarity=0.152 Sum_probs=141.2
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.+...++..++.+=+..++.+.-..|-.+.+|++..+..++....+++..++++++|+|.||+ |-|++++++++++.+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3555555666666666667777788999999999999999999999999999999999999998 999999999888877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
..+...+.. ....+++.-++.|+..|+.++..=++.++..|++ +-+++++.|
T Consensus 331 ~~~~~~~~~----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~------k~~~fFgly 382 (438)
T COG2270 331 AALYLIFLE----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKG------KEGRFFGLY 382 (438)
T ss_pred HHHHHHHcc----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc------cccceeehh
Confidence 666655544 3445556667789999999999999999999998 599999999
Q ss_pred HHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 224 (294)
++.....+.+||+..+.+.+.+| -|..+...+++..+++++.+
T Consensus 383 altgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 383 ALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 99999999999999988877665 45666655555555554443
No 164
>PRK10133 L-fucose transporter; Provisional
Probab=99.23 E-value=5.5e-10 Score=105.32 Aligned_cols=161 Identities=14% Similarity=0.078 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHh-hhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~ 105 (294)
.....++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ |+|+++..+.++..++..+
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 33444555566666667888886 567899999999999999999999999999999998 9999998887776655544
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 022608 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (294)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 185 (294)
..+.. +.. ......+.|++.+...|...+...|.++++ .+...+...+ .
T Consensus 342 ~~~~~----------------------~~~-~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~~-~ 390 (438)
T PRK10133 342 SAFAG----------------------GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIVM-T 390 (438)
T ss_pred HHHcC----------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHhH-H
Confidence 43322 111 234556789999999999999999998874 3344444433 3
Q ss_pred HHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHH
Q 022608 186 GAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLS 219 (294)
Q Consensus 186 ~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~ 219 (294)
.+|+.++|.+.|.+.+..| -+..|++..+..+..
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 4678888888898888887 677777665544433
No 165
>PRK09848 glucuronide transporter; Provisional
Probab=99.23 E-value=6.3e-10 Score=104.99 Aligned_cols=163 Identities=12% Similarity=0.116 Sum_probs=120.4
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|.+.......++....++......+.|+++.+|.+....+.......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455555666666666666666677788888888766555544444566778899999999998 999999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh-hhhhhhhHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNW 180 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~ 180 (294)
+.+.+.+.. ..+.+.+.+..++.++|.+...+...++.+|..|.++-. +.++.|..++.
T Consensus 307 ~~~~~~~~~--------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 307 GYLLFFWVS--------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHHHHcC--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 776665422 124555666677889999999999999999988865421 23356889999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccch
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
+++...+|..+++.+.+.+.+..||
T Consensus 367 ~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 367 FSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999887766544443
No 166
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.22 E-value=3.5e-10 Score=108.37 Aligned_cols=166 Identities=17% Similarity=0.108 Sum_probs=106.3
Q ss_pred HHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHH------------HHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH
Q 022608 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAAN------------TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (294)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 97 (294)
..++..+.+|+...+.|.+++ ..|++..+++. ...+..++..++.+++++++||+ |||++++++.+
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344556777888888888885 56776442211 12233345556778899999998 99999988887
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
+..++.+++...... .. ....+....+...++..+..+....+.+|.+|++ .|+++
T Consensus 374 ~~~~~~~~l~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~------~R~~~ 429 (502)
T TIGR00887 374 ILTVLFFVLGFAYNH-----------------LS-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTR------YRSTA 429 (502)
T ss_pred HHHHHHHHHHHHHHh-----------------cc-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchh------HHHHH
Confidence 777666555543200 00 1111111111122222334456677789999998 69999
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeec----------cchhhhhhHhHHHHHHHHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDN----------IGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~ 221 (294)
.++.+....+|++++|.+.+++.+. .++...|++.+++.+++.+
T Consensus 430 ~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 430 HGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999988763 3344556666555555443
No 167
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=5.2e-10 Score=106.42 Aligned_cols=146 Identities=10% Similarity=0.050 Sum_probs=106.8
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH----hhcch-hHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGR-FWTITIASIIYQIGM 103 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr-r~~l~~~~~~~~i~~ 103 (294)
+..+..++.+..+..+++.|+++.+|+++..++.+..+.-+...+..|+.|+++| |+ || |+.++++.+...++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 4456667777777888999999999999999999999999999999999999999 65 88 566666777666666
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+++.... ... .....+.+.+..++.+++......+..++.+|+.++.+ +|.+..++-..
T Consensus 92 ~llf~~p---~~~-------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~ 150 (473)
T PRK10429 92 FLLFSAH---LFE-------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRF 150 (473)
T ss_pred HHHHcCC---CCC-------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHH
Confidence 5554321 110 11133344455566678888888888999999886543 58888887666
Q ss_pred HHHHHHHHHHHhh
Q 022608 184 VMGAAILVAVTVL 196 (294)
Q Consensus 184 ~~~ig~~~~~~~~ 196 (294)
..++|+.+.+.+.
T Consensus 151 ~~~ig~~~~~~~~ 163 (473)
T PRK10429 151 FASLAGFVTAGFT 163 (473)
T ss_pred HHHHHHHHHHHHH
Confidence 6677766655443
No 168
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.20 E-value=3.3e-13 Score=127.01 Aligned_cols=148 Identities=20% Similarity=0.232 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHH
Q 022608 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAIL 137 (294)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
...++..+...++..+|.+++|+++||+ |||++++++.++..++.++..++.. ..+.+.+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~ 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS-------------------YNNFWML 105 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc-------------------ccccccc
Confidence 3567889999999999999999999998 9999999999999999888777541 1267788
Q ss_pred HHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee---ccchhhhhhHhHH
Q 022608 138 YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD---NIGWGWGLGIPTF 214 (294)
Q Consensus 138 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~---~~g~~~~f~~~~~ 214 (294)
.++|++.|++.|+..+..+.++.|..|++ .|+....+.+....+|..++..+...+.. ..+||..+.+..+
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred ccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998 59999999998888888888766544332 2459988877776
Q ss_pred HHHHHH--HHHHHhcccee
Q 022608 215 AMFLSI--IAFLIGYPLYR 231 (294)
Q Consensus 215 ~~~~~~--~~~~~~~~~~~ 231 (294)
..++.+ ..+..+.|++.
T Consensus 180 ~~l~~~~~~~~~pESP~wL 198 (451)
T PF00083_consen 180 PSLLVLLLRFFLPESPRWL 198 (451)
T ss_pred cccccccccccccccccee
Confidence 554332 23444455554
No 169
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.20 E-value=6.1e-10 Score=116.47 Aligned_cols=163 Identities=10% Similarity=0.027 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHH-HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT-KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
.++.+++..++.....+.+..+++.|+++.+|++.. ..+++.....++..++.+++|+++||+ ++++++.++.++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 334444444445555556677889999999999999 999999999999999999999999998 999988888777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
+.+++.... +.+.+++..++.|++.+...+...+++.+.+|++ .||+++++.
T Consensus 312 ~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~rg~~~~~~ 363 (1146)
T PRK08633 312 SLFLLPTAP----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK------ELGKVLAAN 363 (1146)
T ss_pred HHHHHHHhh----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc------chhhhhHHH
Confidence 766665544 5566667778889999988888899999999988 599999999
Q ss_pred HHHHHHHHHHHHHhhhheee-ccchhhhhhHhHH
Q 022608 182 YFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTF 214 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~ 214 (294)
++..++|.++++.+++.+.. .+++...|++.+.
T Consensus 364 ~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 364 NFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999998888777665433 2334444444333
No 170
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.19 E-value=1.2e-09 Score=104.89 Aligned_cols=172 Identities=15% Similarity=0.131 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
+..++...++.++....+...+|.+.++.+|.+....|++.+...++..++.++.+++.+|+ ++++.+..+.++..++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33344444455555445556688888899999999999999999999999999999999997 99999888888888777
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
+.+.+.. +.+...+..++.|++.........+.+.+..|++ .||+.++.+++
T Consensus 299 ~~lal~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~ 350 (524)
T PF05977_consen 299 LLLALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQM 350 (524)
T ss_pred HHHhcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHH
Confidence 7777655 6677777788889988888888888888989988 59999999999
Q ss_pred HHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHH
Q 022608 184 VMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFL 224 (294)
Q Consensus 184 ~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 224 (294)
....+..+|.++.|.+.+.+|.+..+.+.++..+++.++..
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888877766555544443
No 171
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.18 E-value=7.2e-10 Score=104.00 Aligned_cols=163 Identities=17% Similarity=0.150 Sum_probs=133.2
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.|.+..++...++..+.+......++.|.+..+|.+ ...+.+..+..+...++.++.++++||+ |+|+++..+.++.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAA 301 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHH
Confidence 356667777788888887777778888888888877 5566777788888999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh-hhhhhhhHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFN 179 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~rg~~~~ 179 (294)
++.+++.+.. ..+.+.+++..++.|++.+.......++++|..+.++.+ ++++.|..++
T Consensus 302 ~~~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 302 LGFLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 9888877754 126778888888999999999999999999999866532 3446799999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccch
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
.+.....+|..++..+.+.+.+..|+
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999887776554443
No 172
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.17 E-value=4e-09 Score=98.08 Aligned_cols=152 Identities=10% Similarity=0.168 Sum_probs=102.8
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHH-HHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 022608 43 TNMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 121 (294)
.+.+.|+.+++|++..+.+++..... ....++.+++|++.||+ |||+.+..+.++..+..+.+......+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 34556777789999999998876654 45788899999999998 999988777766555544333222011
Q ss_pred CccccccccchhHHHHHHHH----HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 122 GEQVCQEANKGQVAILYVSL----LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
.+.+.+.+.. +..+++.+...+....++.+.+|.++ ++ .++...++|..++..++|
T Consensus 301 ----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 301 ----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------YA----LLSALASVGRVYVGPTSG 360 (402)
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------HH----HHHHHHHHHHHHHHHHHH
Confidence 0233333333 34556666667777778888777652 33 333344566665666788
Q ss_pred heeeccchhhhhhHhHHHHHHHHHHH
Q 022608 198 YIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 198 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
.+.+..||+..|.+.+++.++++++.
T Consensus 361 ~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 361 YLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 99999999998988887776665444
No 173
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.17 E-value=4e-09 Score=94.65 Aligned_cols=167 Identities=16% Similarity=0.104 Sum_probs=136.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+..|.+....-.+++.+|.+..|+|.++. +.|+|..+++...+...+......+..-.+++|.-.+|+......+.+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 35677778888899999999999999997 46999999999999999999999999999999876788888888888889
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
|.+.+.+.. . +...+. .+++|+|.|+..+....++.+..++.+ +.++..+..
T Consensus 287 G~~G~~~~P--------------------~-~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgma 338 (395)
T COG2807 287 GLVGLLLAP--------------------G-QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMA 338 (395)
T ss_pred HHHHHHHhh--------------------h-hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHh
Confidence 988887654 1 222222 378899999999999999998776654 577788888
Q ss_pred HHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHH
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMF 217 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~ 217 (294)
+....+-...||++.|++.|..| |+..+...+...+
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 88888888999999999988765 7766655444433
No 174
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.16 E-value=7.3e-10 Score=115.99 Aligned_cols=183 Identities=9% Similarity=-0.009 Sum_probs=127.9
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++.+++..++..+.++.+.+++|.|+++.+|.+....+++.+...++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4555566666666777777788999999999999999999999999999999999999999987 666666555555444
Q ss_pred HHHHHHHHh-hcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 102 GMICLTISA-ILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 102 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+.+.+.+.. .........+. -.+.. ...+.+.++++.++.|++.+...+...+++.+.+|++ .+|+.++.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g~ 374 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKS--ILVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIAA 374 (1140)
T ss_pred HHHHHHhcccccccccccccc--hhhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeHH
Confidence 443333210 00000000000 00000 0014456667778889999999999999999999998 49999999
Q ss_pred HHHHHHHHHHHHHHhhhheee-ccchhhhhhHhHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTF 214 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~ 214 (294)
+++..++|..+++++.+.+.. ..++...+++.++
T Consensus 375 ~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 375 NNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999999999998887763 3455555544443
No 175
>PRK10054 putative transporter; Provisional
Probab=99.16 E-value=9.6e-10 Score=102.20 Aligned_cols=172 Identities=10% Similarity=-0.003 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTT--QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.++......++..+.+.....+++.|+.. +.+.+....+.+............++.|++.||+ ++|+.+..+.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 44444455555555555555566777653 3455566667777777677677778889999998 99999998887777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++...+.... .+.+.+.++.++.++|.+...+....++.+..|++ .+++.++.
T Consensus 286 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~~~~~~~ 338 (395)
T PRK10054 286 IGLVGFIFSG---------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MKASYFSA 338 (395)
T ss_pred HHHHHHHHcc---------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cceehHhH
Confidence 7776665432 14455666777888998887888888899988887 57888876
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
.+ ...+|..+||.++|++.+..|....|++.++...++.++.
T Consensus 339 ~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 339 QS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 54 5668999999999999998888877776555444443333
No 176
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.14 E-value=2e-09 Score=100.26 Aligned_cols=134 Identities=9% Similarity=-0.045 Sum_probs=98.5
Q ss_pred hHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 022608 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (294)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 120 (294)
...++|.|+++..+ ++.+.+.+.....++...+....+++.||.++.++.+..+.++..++..++....
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 34567888876555 6677787777766665555555566665543767777777777777766555443
Q ss_pred CCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhee
Q 022608 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~ 200 (294)
+.+.+.+..++.++|.+...+...+++.|..|++ .||+.++.++...++|..+||.+.|++.
T Consensus 296 ------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~------~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 296 ------------NLQQLFTLICLFYIGSIIAEPARETLSASLADAR------ARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc------cchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 4444555566778888877888889999999987 5999999999999999999999999987
Q ss_pred ecc
Q 022608 201 DNI 203 (294)
Q Consensus 201 ~~~ 203 (294)
+..
T Consensus 358 ~~~ 360 (400)
T PRK11646 358 DLG 360 (400)
T ss_pred HHH
Confidence 764
No 177
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.14 E-value=2e-09 Score=102.43 Aligned_cols=165 Identities=14% Similarity=0.071 Sum_probs=117.1
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|.+..++...++.....+......+.|.+...+ +....+.+.....+...++.++.++++||+ |+|++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666666677767666666655555554433 455566666666678888889999999998 999999988877776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHH
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNW 180 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~rg~~~~~ 180 (294)
+.+........+ ..+.+.+.+..++.+++.+...+...++++|..+.++- .++++.|..++.
T Consensus 309 ~~~~~~~~~~~~-----------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGLAA-----------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhccC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 665554321011 11455566666778899999899999999999875532 234457778899
Q ss_pred HHHHHHHHHHHHHHhhhheeeccch
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
..+...+|..+++.+.|++.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999888877655444
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.14 E-value=4.5e-09 Score=97.19 Aligned_cols=177 Identities=11% Similarity=-0.055 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHH--HHHHHHHhhhHHHH-HHHHHhhcchhHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTL--TNFGGTGSLTPLIG-AFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-G~laDr~~Grr~~l~~~~~~~~ 100 (294)
...+....+.+.+.+....+.+|.|++ +.|.|..+.+... ......-.+.+|+. ++++||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 445566778888888878888888886 4699999999973 45566666666666 6678887 99998766653322
Q ss_pred H-HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 101 I-GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 101 i-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
. ....+.... +. ......+.....+.++......+....+..|..+++ +++...+
T Consensus 81 ~~~~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~------~~~~~~~ 136 (390)
T TIGR02718 81 SACLASLALVG--PD----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGR------TLAKGNA 136 (390)
T ss_pred HHHHHHHHcCC--cc----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------hhhHHHH
Confidence 2 222222111 10 001222233334445566666666677777776665 4677777
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHh
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
...++..+|..+++...+++.+.+||+..|++.+++.++..+..+..
T Consensus 137 ~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 137 VQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777788999999888888889999999998887766655544433
No 179
>PRK11462 putative transporter; Provisional
Probab=99.12 E-value=4.2e-09 Score=99.93 Aligned_cols=149 Identities=11% Similarity=0.166 Sum_probs=113.0
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchhH-HHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFW-TITIASIIYQIGMI 104 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~l~~~~~~~~i~~i 104 (294)
+..+..++.+..+..+++.|+++..|+++..++.+..+.-+.-.+.-|+.|.++||. +|||| -++++.+...++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 455566777777778899999999999999999999999999999999999999973 48765 55566677777766
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
++... |... .......+.+..++..++......+..++.+|+.++.+ +|++..++....
T Consensus 96 llf~~---p~~s-------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~ 154 (460)
T PRK11462 96 LAYST---PDLS-------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVL 154 (460)
T ss_pred HHHhC---CCCC-------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHH
Confidence 55532 2110 11223444555566788888888889999999988655 699999999988
Q ss_pred HHHHHHHHHHhhhh
Q 022608 185 MGAAILVAVTVLVY 198 (294)
Q Consensus 185 ~~ig~~~~~~~~~~ 198 (294)
.++|+.+++.+...
T Consensus 155 ~~iG~~~~~~~~~p 168 (460)
T PRK11462 155 ATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 89888887766543
No 180
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.12 E-value=5.8e-09 Score=96.89 Aligned_cols=156 Identities=10% Similarity=0.020 Sum_probs=113.6
Q ss_pred HHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 022608 35 KLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQ 114 (294)
Q Consensus 35 ~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~ 114 (294)
..........++.|+++.+|.+..+.+.+.....++..+++++.+++.||. ++++++..+..+ .+..+.+....
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh----
Confidence 333444555677888888999999999999999999999999999999997 988888777533 23322232222
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022608 115 LRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVT 194 (294)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~ 194 (294)
+.+...+..++.|++.+...++..+.+.+..|++. .+|+..+..++..++|..++..
T Consensus 292 ------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 292 ------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred ------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHH
Confidence 44555566677889888888888888877655431 2799999999999999999998
Q ss_pred hhhheeeccchhhhhhHhHHHHHHHH
Q 022608 195 VLVYIQDNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 195 ~~~~l~~~~g~~~~f~~~~~~~~~~~ 220 (294)
+.+.+ +.+|-+..+.+.....++.+
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVAL 373 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHH
Confidence 87755 55676666665555444443
No 181
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=4.4e-09 Score=96.97 Aligned_cols=166 Identities=10% Similarity=-0.059 Sum_probs=109.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchh---HHHHH-HHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRF---WTITI-ASI 97 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~l~~-~~~ 97 (294)
+..+.+....++....+|++.+|+|.|+++ .|++.. .+....+..+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 456777788888999999999999999965 678764 555555555444444 57788876 543 33232 232
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
+..+......... +.....+...+.+++.....+...++.+|.+|++ .|+++
T Consensus 266 ~~a~~~~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~rgt~ 317 (368)
T TIGR00903 266 LIAAFFLALAFEL----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE------LHGKA 317 (368)
T ss_pred HHHHHHHHHHHcc----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh------hcCcc
Confidence 2222222222221 2223334445556667777777889999999998 59999
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
.++.+...++|+.++|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988876653 55566666655555544443
No 182
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.12 E-value=2.1e-09 Score=98.01 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHH-HHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFG-GTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.+.+.+..++..+.++...++++.|+++ +|++..+.+.+..... +...++.+++|+++||+ |||+.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5555666667788888888999999987 8999999988887665 56778899999999998 9999988888777666
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY 182 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 182 (294)
..+.....+...... .+..+.+.+..+.++.+++.+...+...+++.|.+|++ .||+.++.++
T Consensus 289 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~------~~g~~~g~~~ 351 (356)
T TIGR00901 289 NAGFVWLASNGHHDG-----------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPK------FGATQMALLS 351 (356)
T ss_pred HHHHHHHHhcCcccc-----------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC------ccHHHHHHHH
Confidence 554443210000000 00013456666777889999999999999999999999 5999999887
Q ss_pred HHHH
Q 022608 183 FVMG 186 (294)
Q Consensus 183 ~~~~ 186 (294)
...+
T Consensus 352 ~~~~ 355 (356)
T TIGR00901 352 SLSA 355 (356)
T ss_pred HHHh
Confidence 6544
No 183
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.11 E-value=2.7e-10 Score=106.91 Aligned_cols=179 Identities=13% Similarity=0.126 Sum_probs=127.6
Q ss_pred HHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHH----hhcchhH-HHHHHHHHHHHHHHH
Q 022608 31 EVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVAD----AYAGRFW-TITIASIIYQIGMIC 105 (294)
Q Consensus 31 ~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~-~l~~~~~~~~i~~i~ 105 (294)
.+..++.+.....+++.|+++.+|+++...+.+..+..+...+..|+.|.++| |+ |||| .++++.++..++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 35556666666778899999999999999999999999999999999999999 66 8665 455677777777776
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 022608 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (294)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 185 (294)
+.... |. ..+.......+.+..++..++......+..++.+|..++.+ +|.+..++-....
T Consensus 89 lf~~~--p~------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~ 149 (428)
T PF13347_consen 89 LFSPP--PA------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFS 149 (428)
T ss_pred hhccc--cc------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHH
Confidence 66431 10 00011133344566667789999999999999999988765 6888998888888
Q ss_pred HHHHHHHHHhhhheeecc-------chhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 186 GAAILVAVTVLVYIQDNI-------GWGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 186 ~ig~~~~~~~~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
.+|+.+...+.+.+.+.. +|++...+.+++..+..++.....++
T Consensus 150 ~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 150 MIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 888876666655444222 57777666666555554444443333
No 184
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.11 E-value=4.8e-09 Score=94.13 Aligned_cols=161 Identities=17% Similarity=0.230 Sum_probs=134.8
Q ss_pred HHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcC
Q 022608 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILP 113 (294)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~ 113 (294)
-+-..-++ ..+.+-+++++|++.+.++.+++...++..+.+++..+++.|+ |..+.+..++++..+|.++-...
T Consensus 24 LR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~---- 97 (395)
T COG2807 24 LRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG---- 97 (395)
T ss_pred cchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc----
Confidence 34444333 4455677889999999999999999999999999999999998 99999999999988888776543
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 022608 114 QLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (294)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~ 193 (294)
....++.+-.+.|.|.+..+...|..+-+.||++ .+..++.|.++.++|+.+++
T Consensus 98 -------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa 151 (395)
T COG2807 98 -------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAA 151 (395)
T ss_pred -------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHh
Confidence 3566788888999999999999999999999996 89999999999999999999
Q ss_pred Hhhhheeecc-chhhhhhHhHHHHHHHHHHHHHh
Q 022608 194 TVLVYIQDNI-GWGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 194 ~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
.+...+.++. ||+....+=+...+++++..++-
T Consensus 152 ~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 152 ALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 9888877665 79987776666666666666554
No 185
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.10 E-value=4.4e-09 Score=94.51 Aligned_cols=189 Identities=14% Similarity=0.099 Sum_probs=129.1
Q ss_pred hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
...+.+.+-++...|.+..+..++....+.+..+++..+|.++|++ |||+...+..+..++..++-..+.
T Consensus 95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~sp--------- 164 (528)
T KOG0253|consen 95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASP--------- 164 (528)
T ss_pred HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCC---------
Confidence 3445555666778899999999999999999999999999999998 999988887766555444433332
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
++..+++.|.+.|+|.|+ .|...+.-.|-.|... |+...-.. ....+|......+.-.+
T Consensus 165 -------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea~law~v 223 (528)
T KOG0253|consen 165 -------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEALLAWGV 223 (528)
T ss_pred -------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 778889999999999999 8888888899888774 66555544 55667888777776666
Q ss_pred eeccchhhhhhHhHHHHHHHHHHHH--HhccceeccCCCCChhHHHHHHHHHHHHhCccccCCCC
Q 022608 200 QDNIGWGWGLGIPTFAMFLSIIAFL--IGYPLYRNLDPAGSPFTRLLQVCVAAFRKRKLTMVTDP 262 (294)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (294)
..++||||-+....+-..+..++.. .+.+++.-.+ +++ .+..+.+....|-++.+.|...
T Consensus 224 m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~--G~~-~kAletL~kiArmNg~qlplgv 285 (528)
T KOG0253|consen 224 MSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAK--GDD-YKALETLHKIARMNGKQLPLGV 285 (528)
T ss_pred HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhc--CCh-HHHHHHHHHHHHhcCCCCCcce
Confidence 6788999877666643333222222 2223332222 222 2233444555555666655543
No 186
>PRK09848 glucuronide transporter; Provisional
Probab=99.09 E-value=4.9e-09 Score=98.90 Aligned_cols=150 Identities=11% Similarity=0.053 Sum_probs=98.6
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchhHHH-HHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTI-TIASIIYQIGMI 104 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l-~~~~~~~~i~~i 104 (294)
...+..++.+..+..+++.|+++.+|++..+++.+.....+...+..++.|+++||. +||||.. +++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 455566777766777888999999999999999999999999999999999999995 3666644 555554444443
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
++.... .... .....+..++..++.+++.+...++..++..++.++.+ +|....++-.++
T Consensus 95 ~~~~~~--~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r~~~ 154 (448)
T PRK09848 95 LVFWVP--TDWS-------------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAARGIA 154 (448)
T ss_pred HHHhCc--CCCC-------------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHHHHH
Confidence 332111 0000 01123334445566788888888887888787766643 466665554433
Q ss_pred -----HHHHHHHHHHhhhh
Q 022608 185 -----MGAAILVAVTVLVY 198 (294)
Q Consensus 185 -----~~ig~~~~~~~~~~ 198 (294)
..++..++|.+.+.
T Consensus 155 ~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 155 ASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 33455556665543
No 187
>TIGR00898 2A0119 cation transport protein.
Probab=99.08 E-value=2.5e-09 Score=102.26 Aligned_cols=141 Identities=12% Similarity=0.029 Sum_probs=97.2
Q ss_pred hhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 022608 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (294)
..++.+... ......+...++.++++++.||+ |||+.+.++.++..++.+++.... .
T Consensus 351 ~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~---------------- 407 (505)
T TIGR00898 351 GNLGGNIYL---DLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V---------------- 407 (505)
T ss_pred cccCCChHH---HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C----------------
Confidence 344555332 23344556667888999999998 999999998887777766655433 0
Q ss_pred chhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhh
Q 022608 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLG 210 (294)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~ 210 (294)
. ..+...+..++.+++.+...+....+.+|.+|++ .|+++.++.+....+|+.++|.+.+ + ...++...+.
T Consensus 408 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~------~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~ 478 (505)
T TIGR00898 408 D-LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTV------VRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLV 478 (505)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH------HHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHH
Confidence 0 1233333444556666667778889999999998 5999999999999999999999887 3 3345556666
Q ss_pred HhHHHHHHHHHHH
Q 022608 211 IPTFAMFLSIIAF 223 (294)
Q Consensus 211 ~~~~~~~~~~~~~ 223 (294)
+.+++.+++.+..
T Consensus 479 ~~~~~~~~~~~~~ 491 (505)
T TIGR00898 479 LFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHHHH
Confidence 6555554444433
No 188
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=5.6e-10 Score=102.68 Aligned_cols=118 Identities=18% Similarity=0.143 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 022608 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (294)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
++++...+.+..+.+++..+|+++.||++|++ |||+++...+++++++.+++.++. |-++....
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~---------------~~~~~~~~ 143 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSV---------------GTTSPLGV 143 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCC---------------CCCCCcch
Confidence 37788899999999999999999999999998 999999999999999998666543 11112246
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~ 193 (294)
.+.+...|+++|+|.|+=+|...+..+|..-.+ +||...+.......+|.+.|.
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~------~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANKK------TRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhhc------cccceeEEEEEecchhHhhcc
Confidence 678889999999999999999999999987776 688887765554444444443
No 189
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.08 E-value=2.1e-09 Score=97.00 Aligned_cols=141 Identities=17% Similarity=0.238 Sum_probs=114.5
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCC-HHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMP-LTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~ 105 (294)
++...++..+.++....+++.|+++.+|++ ..+.+.+.....+...++.++.|+++||+ |+++.+........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 445555555677778888999989999999 89999999999999999999999999998 9888887777666666655
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH
Q 022608 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM 185 (294)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 185 (294)
+.... ...+....++..++.|++.+...+....++.|.+|++ ++|+..+.++...
T Consensus 290 ~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 290 LLLLP-------------------FSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE------YRGTAFGLFNSIG 344 (352)
T ss_dssp HCCSH-------------------HHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC------HHHHHHHHHHHHH
T ss_pred HHHHH-------------------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHH
Confidence 55433 1113455555677789999999999999999999987 6999999999999
Q ss_pred HHHHHHHH
Q 022608 186 GAAILVAV 193 (294)
Q Consensus 186 ~ig~~~~~ 193 (294)
++|+.+||
T Consensus 345 ~~~~~igP 352 (352)
T PF07690_consen 345 SLGGIIGP 352 (352)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHCC
Confidence 99999987
No 190
>PRK11043 putative transporter; Provisional
Probab=99.08 E-value=2.8e-08 Score=92.09 Aligned_cols=150 Identities=13% Similarity=0.051 Sum_probs=105.3
Q ss_pred HHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 022608 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTIS 109 (294)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~ 109 (294)
...+....++....++|.|++ +.|++..+.+........+..++.++++++.||+ |+|+.+....++..++.+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555566677788875 5799999999887777788888999999999998 99987766655555544433322
Q ss_pred hhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHH
Q 022608 110 AILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAI 189 (294)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~ 189 (294)
...+ ....+.+.+...+.+++.+...+.......|..|+ .+|+..++++.....++
T Consensus 289 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~ 344 (401)
T PRK11043 289 SLLS-----------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-------ATGKAAALQNTLQLGLC 344 (401)
T ss_pred HHhc-----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------cChHHHHHHHHHHHHHH
Confidence 2000 01334444555677888888888887777787765 38999999988878888
Q ss_pred HHHHHhhhheeeccch
Q 022608 190 LVAVTVLVYIQDNIGW 205 (294)
Q Consensus 190 ~~~~~~~~~l~~~~g~ 205 (294)
..++.+.+.+.+....
T Consensus 345 ~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 345 FLASLLVSALISTPLL 360 (401)
T ss_pred HHHHHHHHHccCCChh
Confidence 8888888877664333
No 191
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.07 E-value=3e-09 Score=101.75 Aligned_cols=176 Identities=16% Similarity=0.152 Sum_probs=142.6
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch--hHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR--FWTITIASIIY 99 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--r~~l~~~~~~~ 99 (294)
+.++.+.+...+..++++.-..+++.|.+ ..+++..+++.+.+...+...++.++.|+++|+. .. +.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45555666667777777777788888887 7899999999999999999999999999999997 63 34444444444
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+.+.+.. +++.++...+++|+..|...+..+..+.|..+.+ +...+++
T Consensus 376 gl~~~~~p~~~----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~G 427 (509)
T KOG2504|consen 376 GLARLFLPFAT----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYG 427 (509)
T ss_pred HHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh------hcchHHH
Confidence 45544444444 6788888888999999999999888999999988 6999999
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccc-hhhhhhHhHHHHHHHHHHHHHhc
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIG-WGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
+......++..+||.+++++.+..| |...|+...+..+++.+..++..
T Consensus 428 l~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 428 LLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999998887 88889988888877765555543
No 192
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.05 E-value=3.8e-08 Score=90.23 Aligned_cols=147 Identities=13% Similarity=-0.059 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i 104 (294)
+......++.....+....+.+.++.+.+|++..+.+.+.....++..++.+++|++.||+ |||+.+..+..+..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3333444444455555566667788888999999999999999999999999999999998 999999988776544433
Q ss_pred HHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHH
Q 022608 105 CLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFV 184 (294)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 184 (294)
.+...... +...+.+.++..+.+.+.+...+....++.|..|. .+++..+..+..
T Consensus 276 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~ 330 (377)
T PRK11102 276 WLVVSALL------------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-------MAGTASSLAGTL 330 (377)
T ss_pred HHHHHHHH------------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-------cchHHHHHHHHH
Confidence 33222100 01233333444444444455555556667777764 377777776543
Q ss_pred -HHHHHHHHHHhhh
Q 022608 185 -MGAAILVAVTVLV 197 (294)
Q Consensus 185 -~~ig~~~~~~~~~ 197 (294)
..+|+.+++.+.+
T Consensus 331 ~~~~g~~~g~~~~~ 344 (377)
T PRK11102 331 RFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHh
Confidence 3466666666543
No 193
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.01 E-value=3.3e-08 Score=89.08 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=102.4
Q ss_pred hhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 022608 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (294)
+++|++..+.+.+.....+...+..++.|.++||+ |||+..+..++++.++.+.- ...
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k-~~~-------------------- 119 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTK-HSS-------------------- 119 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHH-hcc--------------------
Confidence 57899999999999999999999999999999998 99999999998888877532 222
Q ss_pred chhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHHhhhheeeccch--hh
Q 022608 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYY-FVMGAAILVAVTVLVYIQDNIGW--GW 207 (294)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~-~~~~ig~~~~~~~~~~l~~~~g~--~~ 207 (294)
++..++++|++-|++.....+..-+.......+++-++ ...+..++... +...+-+..+.+++.++.+..+. ..
T Consensus 120 --~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~va 196 (354)
T PF05631_consen 120 --NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVA 196 (354)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcc
Confidence 68889999999999998888776655533333322110 12333333222 12222223333344445554444 56
Q ss_pred hhhHhHHHHHHHHHHHHHhcc
Q 022608 208 GLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 208 ~f~~~~~~~~~~~~~~~~~~~ 228 (294)
+|....++.+++.+++...++
T Consensus 197 PF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 197 PFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred hHHHHHHHHHHHHHHHHhccc
Confidence 787777777766665554443
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=98.99 E-value=1.5e-08 Score=95.56 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.++.++...++............+.|.+..++ +....+.+.....+...++.+++++++||+ |||+.+..+.++..++
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 230 QWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 34444444444434433333333334333333 233334445555666778888999999998 9999999887665544
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh-hhhhhhhHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 181 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~~ 181 (294)
.+...+.. ..+.+.+++..++.|++.+...+...++++|..+.++.+ ++++.|..++.+
T Consensus 308 ~~~~~~~~--------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~ 367 (444)
T PRK09669 308 SALIFFIP--------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN 367 (444)
T ss_pred HHHHHHhC--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH
Confidence 33333221 125566677778889999999999999999998855432 334567888899
Q ss_pred HHHHHHHHHHHHHhhhheeeccch
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g~ 205 (294)
++...+|..+|+.+.+.+.+..|+
T Consensus 368 ~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 368 LFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998887665555
No 195
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2e-08 Score=95.02 Aligned_cols=177 Identities=14% Similarity=0.050 Sum_probs=120.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch--------hHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR--------FWTIT 93 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--------r~~l~ 93 (294)
+.+|.+++..++.+.+++.+..++|.|+.+.+|+|..+.|+..++..+...+..+++|.++|+. -+ ||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 5778888999999999999999999999999999999999999999999999999999999998 33 12111
Q ss_pred -HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 022608 94 -IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (294)
Q Consensus 94 -~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
++.....++++.+.+.. . .+ .......+.++..+.|+..++. ..-..|..|.+
T Consensus 337 ~i~~~~~ai~l~~l~~~~---~------~~-------~~~a~~~l~~~~~~~g~~~~Gf----~~~~~~~apq~------ 390 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTS---D------EH-------RLLAVILLTIAIGLSGFNISGF----YKNHQDIAPQH------ 390 (466)
T ss_pred hHHHHHHHHHHHeeeecC---C------Cc-------chHHHHHHHHHHHHcccchhhh----HhhhhhccchH------
Confidence 12222222222222221 0 00 0001111222222222222222 22223335554
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhheeec---cchhhhhhHhHHHHHHHHHHHHHh
Q 022608 173 KTWKYFNWYYFVMGAAILVAVTVLVYIQDN---IGWGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 173 ~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
.+..++..+...++.+.++|.+.+.+... ..|++.|.+.+++.+++-+++.+.
T Consensus 391 -a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 -AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 88999999999999999999999988742 369999999998888777666554
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.97 E-value=1.2e-07 Score=87.68 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=59.3
Q ss_pred HhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 022608 39 VGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (294)
Q Consensus 39 ~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~ 110 (294)
.....+.+.|+++++|++..+.+.+.....++..++.++.+++.||+ |||+.+.++..+..++.+.+....
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567788888999999999998889999999999999999998 999999999888877777666543
No 197
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.96 E-value=3.7e-08 Score=92.23 Aligned_cols=155 Identities=15% Similarity=0.128 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchh-HHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRF-WTITIASIIYQ 100 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr-~~l~~~~~~~~ 100 (294)
+.--...+..++.+..+..++..|+++.+|+++..+|.+..+.-+.-++.-|+.|.+.||. +||+ +-++.+.+...
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~ 94 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFA 94 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHH
Confidence 3334556667777777888999999999999999999999999999999999999999975 4765 55666667777
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+..+++..+.+. + ...+....++..++.+++......+..++.+|+.++.+ +|.+..++
T Consensus 95 i~~~l~F~~p~~-~---------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~ 153 (467)
T COG2211 95 IVAVLLFITPDF-S---------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSW 153 (467)
T ss_pred HHHHHHHcCCCc-c---------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHH
Confidence 776666654411 1 12345555666788899999999999999999988765 79999999
Q ss_pred HHHHHHHHHHHHHHhhhhee
Q 022608 181 YYFVMGAAILVAVTVLVYIQ 200 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~ 200 (294)
-....++|+++...+.+.+.
T Consensus 154 R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 154 RMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999888776665544
No 198
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.93 E-value=1.2e-08 Score=92.90 Aligned_cols=139 Identities=13% Similarity=0.079 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
.+.+....++.....+.+..+++.|+++.+|++..+++.+.....+...++.+++|+++||+ |||+.+..+..+...+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 34444445555556667778899999999999999999999999999999999999999998 99988887776665555
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
.++.... . +..+.+...+...+.+++.|...+...++++|.+|. .+|+..+.++.
T Consensus 306 ~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~g~~~g~~~~ 360 (366)
T TIGR00886 306 FLVVLGL-V-----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-------ATGAVSGLVGA 360 (366)
T ss_pred HHHHhcC-C-----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-------hcccHHHHHHH
Confidence 5444322 0 000334444445555666666667777888888874 38999998877
Q ss_pred HHHHH
Q 022608 184 VMGAA 188 (294)
Q Consensus 184 ~~~ig 188 (294)
..++|
T Consensus 361 ~~~~g 365 (366)
T TIGR00886 361 IGNLG 365 (366)
T ss_pred hccCC
Confidence 76655
No 199
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.92 E-value=2.4e-07 Score=85.73 Aligned_cols=139 Identities=9% Similarity=-0.021 Sum_probs=96.4
Q ss_pred hHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 022608 41 FNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (294)
Q Consensus 41 ~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 120 (294)
.....+.|+++.+|.+..+.+........+..++.++.+++.||+ |++... +.....++.+........
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~-------- 294 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWF-------- 294 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHh--------
Confidence 344566788888999999999888787778888888888999987 743322 222222222222211100
Q ss_pred CCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhee
Q 022608 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~ 200 (294)
...+.+.+.++.++.++|.+...+....+..|.+|++ +|...+.++...++|+.+++.+.+.+.
T Consensus 295 ---------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 295 ---------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0113455666778888998988899999999988753 788888888888999999999988876
Q ss_pred eccchh
Q 022608 201 DNIGWG 206 (294)
Q Consensus 201 ~~~g~~ 206 (294)
....+.
T Consensus 359 ~~~~~~ 364 (394)
T PRK11652 359 QTGQFS 364 (394)
T ss_pred CCchHH
Confidence 553333
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.5e-07 Score=88.92 Aligned_cols=188 Identities=12% Similarity=0.062 Sum_probs=116.9
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
.+.+...+.+.+++.+.-.....+....+-++-|++..++.+.......+..+..+++.++.||+ |||+.++++..++.
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 34455555666666554333333333333346799999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccC-cchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGG-IRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
+..+++.....+.... ..+-....+++.++..++.+. ..|...-+.+|.+|+.. |..+++
T Consensus 347 ~~~~~~~~~~~l~~~~-------------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s 407 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSF-------------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQS 407 (485)
T ss_pred HHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHH
Confidence 8777776554221100 000111223333333333322 24566777899999984 888888
Q ss_pred HHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 180 WYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
+-.....+..++-......+.+.+|- ..|....+...+..+..+...|+
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcc
Confidence 77766666666666666666665554 33443434343443333333333
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.89 E-value=7.3e-08 Score=90.15 Aligned_cols=158 Identities=11% Similarity=-0.054 Sum_probs=109.2
Q ss_pred HHHHHHHHHhHHhhHHHHHHHhhhh-cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 28 FSNEVCEKLAVVGFNTNMISYLTTQ-LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 28 ~~~~~~~~~~~~~~~~~l~~yl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
....++......+..++++.|+++. .+.+...++.....+..+..++.+++++++||+ ++|+++.++.++..+..++.
T Consensus 238 ~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~ 316 (410)
T TIGR00885 238 VIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGS 316 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHH
Confidence 3344444344445567888998653 255556666667777788899999999999998 99999888877777766666
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
.... ... .....++.|+..+.+.|.+.....+..+++ .....+...++ .
T Consensus 317 ~~~~----------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~-------~~~~s~~l~~~-~ 365 (410)
T TIGR00885 317 IFAG----------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQD-------TKYGAAGLVMA-I 365 (410)
T ss_pred HHcC----------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-------hhhhHHHHHHH-H
Confidence 5533 212 234455667777788899999999998876 22223333333 3
Q ss_pred HHHHHHHHhhhheeecc------chhhhhhHhHHHHH
Q 022608 187 AAILVAVTVLVYIQDNI------GWGWGLGIPTFAMF 217 (294)
Q Consensus 187 ig~~~~~~~~~~l~~~~------g~~~~f~~~~~~~~ 217 (294)
+|+++.|.+.|++.|.. +.+..|.++.++.+
T Consensus 366 ~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 366 IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 99999999999999854 46677777655443
No 202
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.3e-07 Score=88.69 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
.+..+++..++...++....+.++.|.+..+|.+................++.++..++.+|+ |||+++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 333444455555555555556677888878888888888888888888888899999999998 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh-hhhhhhhHHHHH
Q 022608 103 MICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK-QATKTWKYFNWY 181 (294)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~~ 181 (294)
.+++.+.. ..+.+.+++..++.++|.+...+...++++|..+-.|-+ ++++-|..++.+
T Consensus 316 ~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 316 YLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 98888765 126777888889999999999999999999988766532 445678888888
Q ss_pred HHHHHHHHHHHHHhhhheeeccc
Q 022608 182 YFVMGAAILVAVTVLVYIQDNIG 204 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l~~~~g 204 (294)
....-+|.+++..+.+++....|
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888777666544433
No 203
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.87 E-value=3.7e-08 Score=92.52 Aligned_cols=156 Identities=17% Similarity=0.154 Sum_probs=120.3
Q ss_pred cccCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch-hHHH
Q 022608 15 KRQKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTI 92 (294)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~l 92 (294)
+..+.+||.++...+.+++..+-++.+....-+|+++ +.+-+.+-.|++++...++..++.+..|+.+.|. |. |+-+
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pl 105 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPL 105 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCH
Confidence 4457899999999999999988888777777788874 4677888899999999999999999999999998 75 7778
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhh
Q 022608 93 TIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT 172 (294)
Q Consensus 93 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
+.|.++.++|.++.......|+ ...+.++++|++.|+|.|... ..=.|+++....++
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~-----------------~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~d----- 162 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPN-----------------GVKYLMLVARILTGVGVGNFA-VLRAYIADASTVED----- 162 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-----------------chHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccc-----
Confidence 8888899999888744432332 267888999999999987644 55888888666654
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHh
Q 022608 173 KTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 173 ~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
|.++++....+..+|..+||.+
T Consensus 163 -R~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 163 -RPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred -hHHHHHHhhhHHHHHHHHhHHH
Confidence 6666665555445555555544
No 204
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.87 E-value=4.8e-08 Score=87.91 Aligned_cols=147 Identities=11% Similarity=0.073 Sum_probs=104.0
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhc--C-----------------CCHHHHHHHHHHHHHHHhhhHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL--H-----------------MPLTKAANTLTNFGGTGSLTPLIGAFV 81 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~G~l 81 (294)
.|..+.+..+.|...+.+|+.+-......+... + .+...-..=.....+.-..|.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 356667778889999999988655544443211 1 111111222345566677889999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhc
Q 022608 82 ADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (294)
Q Consensus 82 aDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 161 (294)
.||+ |||++|..+.+++.+..+++.... +.+ .....++.+|+++. +...+...|..|
T Consensus 405 verl-GRKkTMal~l~~f~iflfll~~c~-----------------~rn-~~tvllf~arafis----g~fqvaYvYtPE 461 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLLTTCK-----------------TRN-AYTVLLFTARAFIS----GAFQVAYVYTPE 461 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHHHHhc-----------------Ccc-hhHHHHHHHHHHHh----chheEEEEecCc
Confidence 9997 999999999998888877776543 111 12334556666554 334466889999
Q ss_pred ccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 022608 162 QFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVL 196 (294)
Q Consensus 162 ~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~ 196 (294)
.+|+. .|++..|.-.....+|+++.|+++
T Consensus 462 VyPTa------vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 462 VYPTA------VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred ccchh------hhhcchhhhhhHHhhhhhhhhHHH
Confidence 99998 599999999999999999999988
No 205
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.83 E-value=8.9e-07 Score=82.56 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 022608 26 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~ 105 (294)
++....+++.+.+-...++++.|+++ .|+|..+.|.+.++..+...+++++.|+++||+..+++.+.+..++..+....
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 34444555555555567889999975 68999999999999999999999999999999844667776666555554444
Q ss_pred HHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCC
Q 022608 106 LTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE 165 (294)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 165 (294)
..... +.+.+.+..++..+......|...++..+...+
T Consensus 85 ~~~~~----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 85 LAFSS----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD 122 (400)
T ss_pred HHHhc----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc
Confidence 33333 455555556666777777777777777666554
No 206
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.82 E-value=2.2e-07 Score=86.10 Aligned_cols=177 Identities=13% Similarity=0.105 Sum_probs=134.7
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcC---CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLH---MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
+.|++|.+.+........++..-..++.|.+..++ .+....|.+.++..+.-.+.-.+..++-+|+ |.|+.++++.
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag 296 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG 296 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence 34566666655555555555555567888875443 3445667777777888888888999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
.++.+=.++++++. +++.+.+...+.++-.+........|+++.+|++ ..++
T Consensus 297 ~i~~iRi~~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r------lsAt 348 (412)
T PF01306_consen 297 VIMAIRIIGSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR------LSAT 348 (412)
T ss_dssp HHHHHHHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG------GHHH
T ss_pred HHHHHHHHHHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh------HHHH
Confidence 88888877777766 7888899999999999999999999999999987 3566
Q ss_pred HHHH-HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 177 YFNW-YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 177 ~~~~-~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
...+ ++.+.++|..+.+.++|++.++.|++.+|++.+.+.++..++..+
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 6665 467889999999999999999999999998877766555444333
No 207
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.81 E-value=3.2e-07 Score=79.68 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=107.3
Q ss_pred cchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHH
Q 022608 21 MITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQ 100 (294)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 100 (294)
|-.+...+.++.+.. +.|.+ +...+.+++.+|+|..+.+.+...-.++..+ .++.|.+.|++ |.+.++++|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHH
Confidence 444444455555443 33333 4456778899999999999999999999886 58889999998 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+|..++++...-. . .....|.+.+..++.+.+.+...+.......+.||.+ ||++.++
T Consensus 78 ~GY~~~~l~~~~~-i--------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgi 135 (250)
T PF06813_consen 78 VGYGLLWLAVSGR-I--------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGI 135 (250)
T ss_pred HHHHHHHHHHhCc-c--------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehh
Confidence 9998888764110 0 1125566666666666766666666666667889975 8999988
Q ss_pred HHHHHHHHHHHHHHh
Q 022608 181 YYFVMGAAILVAVTV 195 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~ 195 (294)
.-....+++.+-..+
T Consensus 136 lk~~~GLSaai~t~i 150 (250)
T PF06813_consen 136 LKGFFGLSAAIFTQI 150 (250)
T ss_pred hhHHHHhHHHHHHHH
Confidence 776666766654444
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.78 E-value=7.2e-07 Score=83.15 Aligned_cols=159 Identities=12% Similarity=0.041 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGM 103 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~ 103 (294)
++..++..++...+.-....+...|+++.-|.+....+.+.++..+.-.+.-.+.+++-.|+ |.+++++++.+.+++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33344445555555555667788899765447777777777777777777778889999997 99999999998877766
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH
Q 022608 104 ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF 183 (294)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 183 (294)
.+.+.... | ..........+.++.|+..+........++.+..|++ .|+++.++++.
T Consensus 288 ~l~a~~~~-~----------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~------~~at~Q~l~~~ 344 (400)
T PF03825_consen 288 LLYAYFSD-P----------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE------LRATAQGLYSA 344 (400)
T ss_pred HHHHHhcC-C----------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc------chHHHHHHHHH
Confidence 66665520 0 0001122333446789999999999999999999998 58999998876
Q ss_pred H-HHHHHHHHHHhhhheeeccchh
Q 022608 184 V-MGAAILVAVTVLVYIQDNIGWG 206 (294)
Q Consensus 184 ~-~~ig~~~~~~~~~~l~~~~g~~ 206 (294)
. ..+|..+|..++|++.+.+|-+
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcch
Confidence 4 6799999999999999887644
No 209
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.73 E-value=7.7e-08 Score=89.13 Aligned_cols=73 Identities=11% Similarity=-0.094 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIAS 96 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 96 (294)
..+.+....+..-+++-...++++.+++++.|++..+.|.+.++..+...+.+|+.|.++||+ |.||-++...
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i 80 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHH
Confidence 445555555555555556678899999988999999999999999999999999999999998 9666555443
No 210
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.72 E-value=9.9e-07 Score=82.51 Aligned_cols=168 Identities=15% Similarity=-0.000 Sum_probs=102.8
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++......++....++.+....|.|+++.+|.+..+.++......++..++..+.+.+.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 3455555555666677777777789999988999999999988777778888777777766544 444444333344444
Q ss_pred HHHHHHHHhh-cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 102 GMICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 102 ~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+.+++..... .+ ...+..+++.++.++|.+...++.....-. +.+. .+|+..+.
T Consensus 297 g~~l~~~~~~~~~------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al~--~~~~-----~~G~a~a~ 351 (413)
T PRK15403 297 GLALLIVGNLLWP------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF--SNNL-----PKGTVSAS 351 (413)
T ss_pred HHHHHHHHHHHcc------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc--cCCC-----CCcHHHHH
Confidence 4444332210 01 023334567777788888877776643322 2222 25666677
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAM 216 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~ 216 (294)
++.....+..+++...+++... +-...|....++.
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 386 (413)
T PRK15403 352 LNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVA 386 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHH
Confidence 6666666777777777776544 3344454444433
No 211
>PRK11462 putative transporter; Provisional
Probab=98.72 E-value=1.1e-06 Score=83.35 Aligned_cols=157 Identities=13% Similarity=0.081 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
++...++..+...........|.+..+|.+ ...+.+...+.+...++.+++++++||+ |+|+++..+..+..+..++.
T Consensus 233 l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~ 310 (460)
T PRK11462 233 VGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAM 310 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHH
Confidence 333334444443333344444444444433 3345566677777888899999999998 99988775554444433333
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCCh-hhhhhhhhHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDP-KQATKTWKYFNWYYFVM 185 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~rg~~~~~~~~~~ 185 (294)
.+.. ..+...+++..++.|++.+...+...++++|..+.++- .++++.|..++...+..
T Consensus 311 ~~~~--------------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~ 370 (460)
T PRK11462 311 FFVP--------------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVL 370 (460)
T ss_pred HHhc--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHH
Confidence 2221 11223334444566777777777778888888774432 12334566677777788
Q ss_pred HHHHHHHHHhhhheeeccch
Q 022608 186 GAAILVAVTVLVYIQDNIGW 205 (294)
Q Consensus 186 ~ig~~~~~~~~~~l~~~~g~ 205 (294)
.+|..+++.+.+.+.+..|+
T Consensus 371 Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 371 KLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 88888888877765543333
No 212
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.70 E-value=2e-09 Score=103.70 Aligned_cols=193 Identities=12% Similarity=0.217 Sum_probs=3.0
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~ 108 (294)
+..+.+ ...+++......-+++.|+++..++|++.+.+.++..+..++..++.+|. -|.|.+-+|.++..+|.+++++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc
Confidence 344444 66666666666778889999999999999999999999999999999996 7888899999999999988876
Q ss_pred HhhcCCCCCCCCC-------------Ccccc-------------------ccccchhHHHHHHHHHHHHHhccCcchhhh
Q 022608 109 SAILPQLRPPPCE-------------GEQVC-------------------QEANKGQVAILYVSLLLAALGSGGIRPCVV 156 (294)
Q Consensus 109 ~~~~~~~~~~~~~-------------~~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 156 (294)
.. +....|. +.+.| .+.......+++++.++.|+|....++...
T Consensus 88 Ph----f~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 88 PH----FLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred cH----hhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 44 2222221 01122 111112346778899999999999999999
Q ss_pred hhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec---------------------cc-hhhhhhHhHH
Q 022608 157 AFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---------------------IG-WGWGLGIPTF 214 (294)
Q Consensus 157 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~---------------------~g-~~~~f~~~~~ 214 (294)
+|+=|..+++ .-+...+.++....+|.++|.++++...+. .| |+..|.+.++
T Consensus 164 tYiDDnv~~~------~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~ 237 (539)
T PF03137_consen 164 TYIDDNVSKK------NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGI 237 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccccccc------cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999888 478888899999999999998887754321 23 7777777777
Q ss_pred HHHHHHHHHHHhccceecc
Q 022608 215 AMFLSIIAFLIGYPLYRNL 233 (294)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (294)
+.++..+.++.+.++.+..
T Consensus 238 ~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 238 LLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHcCCccCCCc
Confidence 6666666665555555444
No 213
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.69 E-value=5.6e-07 Score=85.84 Aligned_cols=182 Identities=9% Similarity=0.017 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHH----HHHHHHHHHHHHhhhHHHHH----HHHHhhcchhHH--HHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTK----AANTLTNFGGTGSLTPLIGA----FVADAYAGRFWT--ITIAS 96 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~--l~~~~ 96 (294)
++....+....+.-..+.++.|.++..+.+... .+++.+.-.+...+.+++.. ++.||..+.+.. +.+|+
T Consensus 277 l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~ 356 (475)
T TIGR00924 277 LFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGM 356 (475)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 334444444555555566777776654443222 44555555555555555433 445541122333 36788
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 97 IIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 97 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
++..++.+.+.+...... .....+.+.+....++.++|.....|...+++++..|++ .||+
T Consensus 357 ~l~~~~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~------~~g~ 417 (475)
T TIGR00924 357 LFCGASFLTFAASIWFAD-------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR------LMGQ 417 (475)
T ss_pred HHHHHHHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH------HHHH
Confidence 888888777665321100 001236777888889999999999999999999999998 6999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhc
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGY 227 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 227 (294)
.++.++....+|..+++.+........+|...|...+++.++..++++...
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988877666666777777766666555555544433
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.69 E-value=1.3e-06 Score=80.08 Aligned_cols=166 Identities=12% Similarity=0.172 Sum_probs=126.6
Q ss_pred HHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhc
Q 022608 33 CEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAIL 112 (294)
Q Consensus 33 ~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~ 112 (294)
...+++++=-..+=+|--+.||++..+...+...+..+..++-.+.|++..|..+++++..+++.+..++..+..++.
T Consensus 219 l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~-- 296 (403)
T PF03209_consen 219 LGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAG-- 296 (403)
T ss_pred HHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHH--
Confidence 334444433344557888899999999999999999999999999999988555899999999999988888877766
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022608 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (294)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~ 192 (294)
...+.+.+..+.+++|+|.|.+.......+.|...+. +.|..++.+-....+...++
T Consensus 297 -----------------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~------~aG~~mG~WGaaQA~A~Glg 353 (403)
T PF03209_consen 297 -----------------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG------RAGLFMGAWGAAQAIARGLG 353 (403)
T ss_pred -----------------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc------chhHHHHHHHHHHHHHHHHH
Confidence 2236788999999999999999988888999988776 58889998887777777777
Q ss_pred HHhhhheee----------ccchhhhhhHhHHHHHHHHHHH
Q 022608 193 VTVLVYIQD----------NIGWGWGLGIPTFAMFLSIIAF 223 (294)
Q Consensus 193 ~~~~~~l~~----------~~g~~~~f~~~~~~~~~~~~~~ 223 (294)
..+++.+.| ..+|...|.+-++.+++++++.
T Consensus 354 ~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 354 TFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 666655433 2345556666666555554443
No 215
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.66 E-value=1.5e-06 Score=80.28 Aligned_cols=134 Identities=12% Similarity=0.017 Sum_probs=101.6
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
...+|.++-+| +...+-+...++++++....+.+-|+.|++ |-|...+++..+.++|..+-..+. .|..
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v-------- 134 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFV-------- 134 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccc--------
Confidence 35567776777 777788889999999999999999999998 999999999999999998877765 3321
Q ss_pred cccccccchhHH--HHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 124 QVCQEANKGQVA--ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 124 ~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
+...+ ....+..+.+...-......+-..+-+|++++ |..+...-.++..+|.+++.++.+.+..
T Consensus 135 -------~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 135 -------PPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred -------cccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 11223 55667777777666666555566677899884 8888887777777888888777665543
No 216
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.57 E-value=4e-06 Score=76.60 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=109.9
Q ss_pred hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
++-+++++|+.+..|.+..+++...+.+..+.++|.+++.++..|+ ...|.+.+.+++.++..+...+..
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~--------- 323 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIG--------- 323 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 3457899999888999999999999999999999999999999997 888988888766665555555544
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
+.+. +.+.++.|+..+.+.|.+.+...+..|.+. ..+... -....+|+++.|.+.|++
T Consensus 324 -------------g~v~-~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~~---l~maivGGAiiP~l~G~i 381 (422)
T COG0738 324 -------------GVVA-LYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSGL---LVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred -------------ChHH-HHHHHHHHHHhHHHHHHHHHHHHhccCccc-----ccccee---eeeheecchHHHHHHHHH
Confidence 3222 334566788999999999999999999664 233222 224567999999999999
Q ss_pred eeccchhhhhhH
Q 022608 200 QDNIGWGWGLGI 211 (294)
Q Consensus 200 ~~~~g~~~~f~~ 211 (294)
.|..|....+..
T Consensus 382 ~d~~g~~~~~~~ 393 (422)
T COG0738 382 ADMFGIQLTFLI 393 (422)
T ss_pred HHhhhhHHHHHH
Confidence 999988876663
No 217
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.51 E-value=8.2e-06 Score=70.53 Aligned_cols=145 Identities=19% Similarity=0.275 Sum_probs=104.6
Q ss_pred HHHHHHhhhhcCCCH--HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 022608 43 TNMISYLTTQLHMPL--TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPC 120 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 120 (294)
...+.+. ...+.+. ...++......+...++.++.|.++||+ |||+.+..+.....++.+...+..
T Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 90 (338)
T COG0477 23 PALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP---------- 90 (338)
T ss_pred HHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc----------
Confidence 3344444 3444444 5788889999999999999999999998 999888888766555544444443
Q ss_pred CCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCC-CChhhhhhhhhHHHHHHH-HHHHHHHHHHHhhhh
Q 022608 121 EGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE-TDPKQATKTWKYFNWYYF-VMGAAILVAVTVLVY 198 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~rg~~~~~~~~-~~~ig~~~~~~~~~~ 198 (294)
. ...+.+.+.+.+.|++.+...+...+++.|.+|. . +|+...+.... ...+|..+++.+.+.
T Consensus 91 ---------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T COG0477 91 ---------N-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT------ERGLAVGLVTLGAGALGLALGPLLAGL 154 (338)
T ss_pred ---------c-chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 2467788888889999999999999999999987 3 47888887777 567777777766555
Q ss_pred eee--ccchhhhhhHhHHH
Q 022608 199 IQD--NIGWGWGLGIPTFA 215 (294)
Q Consensus 199 l~~--~~g~~~~f~~~~~~ 215 (294)
+.. ..+|+..|.+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 155 LLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHhcchHHHHHHHHHH
Confidence 443 35677755544443
No 218
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.50 E-value=4.9e-06 Score=78.47 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=114.1
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh--cc--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 44 NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY--AG--RFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 44 ~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
....|+++++|+++++...+.+...+-.. .-++.|.++|.+ +| ||+-++++.++..++.+.+.... .
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~----- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---A----- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---c-----
Confidence 35578889999999998876666655544 667888999986 34 55666667766655555554432 1
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
...+.....+..++..+|........-+++.|....+.. .+|...++.+....+|++++..+.|.+
T Consensus 82 ----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 82 ----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred ----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 011334445566777889999999999999998766542 378888899999999999999999999
Q ss_pred eeccchhhhhhHhHHHHHHHHHH
Q 022608 200 QDNIGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 200 ~~~~g~~~~f~~~~~~~~~~~~~ 222 (294)
.+..+++..|.+.+++..+..+.
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHH
Confidence 99889998888887765555433
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=3.5e-07 Score=83.20 Aligned_cols=163 Identities=10% Similarity=0.054 Sum_probs=117.5
Q ss_pred HHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHHHHhh
Q 022608 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG--RFWTITIASIIYQIGMICLTISAI 111 (294)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~l~~~~~~~~i~~i~~~~~~~ 111 (294)
.+.+.-.....++.+..+++..+.-+.++...-..+.+.++..+.|.++||+ + |......++++..+......+..
T Consensus 282 ~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~~- 359 (464)
T KOG3764|consen 282 SNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFAT- 359 (464)
T ss_pred ccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhhh-
Confidence 4444445566677888888886666888888888999999999999999998 8 42233333332222222222222
Q ss_pred cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHH
Q 022608 112 LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILV 191 (294)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~ 191 (294)
++..+++-+...+++.+...+...+......+.+...+-...|..+++...+..+|.++
T Consensus 360 ---------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~ 418 (464)
T KOG3764|consen 360 ---------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAI 418 (464)
T ss_pred ---------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhc
Confidence 66778888888888888888887777777777654322225788899999999999999
Q ss_pred HHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 192 AVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 192 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
||.++|.+.+..|+.|...+.++..++-
T Consensus 419 GP~~gg~iv~~iGF~wl~~iig~~n~iy 446 (464)
T KOG3764|consen 419 GPTFGGSLVEAIGFEWLMTIIGILNLIY 446 (464)
T ss_pred cccccchheeehhHHHHHHHHHHHHHHH
Confidence 9999999999999988776666654443
No 220
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.47 E-value=2e-06 Score=82.06 Aligned_cols=164 Identities=16% Similarity=0.127 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchhHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTITIASIIY 99 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l~~~~~~~ 99 (294)
.+|...+..++.....|++..++|.|+++..|++..+++++...+.++..++.+++|+++||. +.+|......+.++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 566677888888899999999999999986779999999999999999999999999999993 26666666555444
Q ss_pred H-HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 100 Q-IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 100 ~-i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
. ++.+.+.... .......+.+....+.+...++...-..+....+. ++-+..
T Consensus 354 ~~~g~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~ 406 (495)
T KOG2533|consen 354 AIIGAISLLAAA----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTV 406 (495)
T ss_pred HHHHHHHHHhhc----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHH
Confidence 3 3433333322 11112222222223333334444444555555543 444445
Q ss_pred HHHHHHHHHHHHHH-HHhhhheeeccchhhhhhHhH
Q 022608 179 NWYYFVMGAAILVA-VTVLVYIQDNIGWGWGLGIPT 213 (294)
Q Consensus 179 ~~~~~~~~ig~~~~-~~~~~~l~~~~g~~~~f~~~~ 213 (294)
+....+.+.++.++ ++..+.....++|.+.|....
T Consensus 407 ~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 407 SAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred hhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 55555555544444 444555666678888884433
No 221
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.42 E-value=9.1e-06 Score=77.84 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=97.6
Q ss_pred HHHhHHhhHHHHHHHhhhhcCCCHH----HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhH-------HHHHHHHHHHHH
Q 022608 34 EKLAVVGFNTNMISYLTTQLHMPLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-------TITIASIIYQIG 102 (294)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~l~~~~~~~~i~ 102 (294)
....+......++.|.++..+.+.. ...++.+...+...+..++.|++.||+ |+|+ -+.+|.++..++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHH
Confidence 3344444446677777643333210 123344444455667788889999998 9886 366777777777
Q ss_pred HHHHHHHhh-cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 103 MICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 103 ~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
.+.++.... ... .....+.+.+....++.|+|.+...+....++.+..|++ .+|.+++.+
T Consensus 360 ~~~~~~~~~~~~~-------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~------~~g~~~g~~ 420 (489)
T PRK10207 360 FLTAAAAGMWFAD-------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH------LMGFILGMW 420 (489)
T ss_pred HHHHHHHHHhhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH------HHHHHHHHH
Confidence 654432210 000 001124555667778899999999999999999999998 599999999
Q ss_pred HHHHHHHHHHHHHhhhhe
Q 022608 182 YFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 182 ~~~~~ig~~~~~~~~~~l 199 (294)
++..++|+.++..+....
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999988776544
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.40 E-value=1.3e-05 Score=77.08 Aligned_cols=169 Identities=14% Similarity=0.017 Sum_probs=106.0
Q ss_pred HHHHHhHHhhHHHHHHHhhh--hcCCCHH------HHHHHHHHHHHHHhhhHHHH----HHHHHhhcchhHHHHHHHHHH
Q 022608 32 VCEKLAVVGFNTNMISYLTT--QLHMPLT------KAANTLTNFGGTGSLTPLIG----AFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 32 ~~~~~~~~~~~~~l~~yl~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~l~~~~~~~ 99 (294)
+.....+|.+...++.++.. ..+.+.. ..+++.+.-.+...+..++. +++.||+ +..+.+.+|.++.
T Consensus 282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~ 360 (500)
T PRK09584 282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLC 360 (500)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHH
Confidence 34455566666666666542 1112111 13344444444444555555 5555554 5668888899999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHH
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFN 179 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~ 179 (294)
.++.+.+......+. .....+.+.+....++.++|.+...|....++.+..|++ .||+.++
T Consensus 361 ~l~f~~l~~~~~~~~-------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~------~rg~~~g 421 (500)
T PRK09584 361 SGAFLVLPLGAKFAN-------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR------LMGFIMG 421 (500)
T ss_pred HHHHHHHHHHHHhcC-------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH------HHHHHHH
Confidence 999888776652211 001124556777889999999999999999999999998 6999999
Q ss_pred HHHHHHHHHHHHHHHhhhhee----------eccchhhhhhHhHHHHHHHH
Q 022608 180 WYYFVMGAAILVAVTVLVYIQ----------DNIGWGWGLGIPTFAMFLSI 220 (294)
Q Consensus 180 ~~~~~~~ig~~~~~~~~~~l~----------~~~g~~~~f~~~~~~~~~~~ 220 (294)
.+++...+|+.++..+.+... ...++...|...+++.++..
T Consensus 422 ~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 422 SWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIA 472 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 998887777777766654221 11135566665555544333
No 223
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.40 E-value=3e-06 Score=83.12 Aligned_cols=200 Identities=12% Similarity=0.186 Sum_probs=144.7
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
+.++.++....+......++.....+-+.+.++++..+.|++.+.+-++..+...+.++.+-|. -|.+.+-+|.+++.+
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4455455444444333346666666777789999999999999999999999999999999997 788889999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCC------------------------------C-ccccc--cccchhH-HHHHHHHHHHHHh
Q 022608 102 GMICLTISAILPQLRPPPCE------------------------------G-EQVCQ--EANKGQV-AILYVSLLLAALG 147 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~------------------------------~-~~~~~--~~~~~~~-~~~~~~~~l~g~g 147 (294)
+.++.++...+ ..+|. + .+.|. ...+..+ .+++++.++.|+|
T Consensus 175 gsll~alPHf~----~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG 250 (735)
T KOG3626|consen 175 GSLLFALPHFF----SGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIG 250 (735)
T ss_pred HHHHHhChHHh----cCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcC
Confidence 99888765322 22221 0 01111 1222223 3677888999999
Q ss_pred ccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec------------------cc-hhhh
Q 022608 148 SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN------------------IG-WGWG 208 (294)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~------------------~g-~~~~ 208 (294)
....++...+|+=|-..++ .-...+++++....+|.++|.++++++... .| |+..
T Consensus 251 ~Tpi~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG 324 (735)
T KOG3626|consen 251 ATPIFTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG 324 (735)
T ss_pred CCCCccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence 9999999999998877766 478888999999999999999888765321 13 7788
Q ss_pred hhHhHHHHHHHHHHHHHhccceec
Q 022608 209 LGIPTFAMFLSIIAFLIGYPLYRN 232 (294)
Q Consensus 209 f~~~~~~~~~~~~~~~~~~~~~~~ 232 (294)
|.+.+.+.++..+.++++.+.+++
T Consensus 325 FLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 325 FLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHHHHhCcccCcc
Confidence 888888777776666666555443
No 224
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.36 E-value=2.2e-05 Score=72.19 Aligned_cols=141 Identities=16% Similarity=0.067 Sum_probs=96.5
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc-----hhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 022608 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-----RFW-TITIASIIYQIGMICLTISAILPQLRPPPCEGE 123 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~-~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 123 (294)
..+++++..-.+..+....+... ..+..|..||++ + ||. -+..|.++...+..+...+...-+- +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~------~~ 78 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAE------SG 78 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcc------cc
Confidence 34688888888888777776655 688999999998 6 554 4445566666655555443211000 00
Q ss_pred cccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc
Q 022608 124 QVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
+.-..+.........++.++.|+|.+...+...++.+|..|++ +|++..++.+...-+|..++.++.+.+.+.+
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~------~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE------RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh------hhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 0000011112223445557779999999999999999999998 6999999999999999999999988776665
Q ss_pred c
Q 022608 204 G 204 (294)
Q Consensus 204 g 204 (294)
.
T Consensus 153 s 153 (403)
T PF03209_consen 153 S 153 (403)
T ss_pred C
Confidence 4
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.34 E-value=1.3e-06 Score=83.14 Aligned_cols=136 Identities=9% Similarity=-0.103 Sum_probs=103.8
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccc
Q 022608 50 TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEA 129 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (294)
++.+|+++...+.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+.......-.....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~------------ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF------------ 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc------------
Confidence 457899999999999999999999999999999987 9999999998888777654321110000000
Q ss_pred cchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc
Q 022608 130 NKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG 204 (294)
Q Consensus 130 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g 204 (294)
.....+.+....++.+++.+....+...++.+..|++ .+|+.++++....++|..+++.+++.+.+..|
T Consensus 347 gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~------~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 347 GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG------CESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC------ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0002223444456777887888888899999999998 49999999999999999999998888887776
No 226
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.29 E-value=2.3e-05 Score=74.26 Aligned_cols=168 Identities=17% Similarity=0.127 Sum_probs=114.2
Q ss_pred HHHHHHHHHHhHHhhH---HHHHHHhhhhcCCCHHH-HHHHHHH----HHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFN---TNMISYLTTQLHMPLTK-AANTLTN----FGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+....+...++++... .+...+.....+.+..+ .+..... ..+...+.+++-|.++||+ |||..+......
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 3444444555544444 44455555444433322 2223333 3567778889999999998 999999998887
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHH--HhccCcchhhhhhhhcccCCCChhhhhhhhh
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAA--LGSGGIRPCVVAFGADQFDETDPKQATKTWK 176 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~ 176 (294)
..+..+...+.. +|.+. +.+ -+.+...+...++++|....+ .|..
T Consensus 102 ~~l~~~~~~~~~-----------------------~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~------~R~~ 148 (463)
T KOG2816|consen 102 TILPALCLLFQG-----------------------YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE------ERSS 148 (463)
T ss_pred HHHhHHHHHHHH-----------------------HHHhh----hcccccchhhhhhhhhhheeeccchh------HHHH
Confidence 777766655532 22222 222 233445667788899988877 5999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 177 YFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 177 ~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
.++..+.+...+..++|.+++++....|....|.+..+..++..+...+..+
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~ 200 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLP 200 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccc
Confidence 9999998888999999999999988888888899888877777655554444
No 227
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.29 E-value=2.2e-05 Score=75.55 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=97.6
Q ss_pred CcchHHHHHHHHHHHHHhHH-hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVV-GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.+++....+.+..++.++-+ .+..+.+..+ +..|.+... ............++..++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 44555544555555554443 3334444444 455665443 4555566666667777889999998 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHH-HHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAIL-YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
+.++.++++.......... .+. .......+ .....+..+.. +..+....+.+|.+|.+ .|+.+
T Consensus 369 m~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~v~~f~~-g~g~v~w~~~sEifp~~------~r~~~ 432 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYP-------NSS--KGAGWLAIVFLCLFIFSFAI-GWGPVPWVIVSEIFPLR------LRSKG 432 (513)
T ss_pred HHHHHHHHHHHHHHhccCC-------Ccc--cchhHHHHHHHHHHHHHHhc-ccccchhhhhhccCcHh------HHhhh
Confidence 9999888876541111000 000 00011222 22222323333 33445567889999998 47777
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
.++-.....+...+-......+....++...|........+..+
T Consensus 433 ~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 433 ASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 76644444333333322222222222233444444444444433
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.27 E-value=6.9e-05 Score=71.31 Aligned_cols=206 Identities=10% Similarity=-0.028 Sum_probs=132.4
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCHH------HH---H-HHHHHHHHHHhhhHHHHHHHHHhhc
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLT------KA---A-NTLTNFGGTGSLTPLIGAFVADAYA 86 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~------~~---~-~~~~~~~~~~~~~~~~~G~laDr~~ 86 (294)
++-++.++.+..++++.-++++.+..+.+.|..+ .++-++. +. + +......+...+.+++--++.+++
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3456788889999999999999888888888764 4543321 11 2 222333334445556667788887
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCC
Q 022608 87 GR-FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDE 165 (294)
Q Consensus 87 Gr-r~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 165 (294)
|+ |++..++.++..++++...+..+.++-.. .....+-...++.+..+..++...+.|+..+.....-.+++++..++
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSR-YYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhccc-cccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 85 66668887888888777765442110000 00000000001112245566666788999999999999999998885
Q ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc--hhhhhhHhHHHHHHHHHHHHHhccc
Q 022608 166 TDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG--WGWGLGIPTFAMFLSIIAFLIGYPL 229 (294)
Q Consensus 166 ~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 229 (294)
++ ++.|..++++|.+..+...+..+..|.+.+.+| -.+.+.+.++..+++.+..+...|+
T Consensus 412 ~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 412 LG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 32 157999999999999999998887777555444 3466777777777666655544443
No 229
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.27 E-value=7.9e-05 Score=71.09 Aligned_cols=173 Identities=15% Similarity=0.015 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHH-HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHH
Q 022608 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIA-SIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILY 138 (294)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~-~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (294)
.+...++..+...+..|+.|.++|+- |+||.++.. .++.++..+++.+.. +.+++...
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--------------------~~~~~~~~ 130 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--------------------PGQWWLAL 130 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--------------------cchHHHHH
Confidence 35667788888889999999999997 766655544 455555666555543 11333333
Q ss_pred HHHHHHHHhccCcchhhhhhhhcccCCCChhhhh--------------------hhhhHHHHHHHHHHHHHHHHHHhhhh
Q 022608 139 VSLLLAALGSGGIRPCVVAFGADQFDETDPKQAT--------------------KTWKYFNWYYFVMGAAILVAVTVLVY 198 (294)
Q Consensus 139 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~rg~~~~~~~~~~~ig~~~~~~~~~~ 198 (294)
+..++..++.+.......+++.|..+++...+.. .|++..+.-+...++|+.+...+.-.
T Consensus 131 ~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 131 VLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556677777888899999998887520000 12788888777788888877665433
Q ss_pred eee--------ccchhhhhhHhHHHHHH-HHHHHHHhcccee--ccCCCCChhHHHHHHHHHHHHh
Q 022608 199 IQD--------NIGWGWGLGIPTFAMFL-SIIAFLIGYPLYR--NLDPAGSPFTRLLQVCVAAFRK 253 (294)
Q Consensus 199 l~~--------~~g~~~~f~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 253 (294)
+.. ....|..+.+.++--++ ++..++..+++.+ ..++..+......+.+...+|+
T Consensus 211 ~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~ 276 (477)
T PF11700_consen 211 LVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE 276 (477)
T ss_pred HHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 211 12235555555554333 3333333333322 1222233344444555555554
No 230
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.25 E-value=1.4e-05 Score=56.57 Aligned_cols=63 Identities=21% Similarity=0.164 Sum_probs=52.5
Q ss_pred HHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 34 EKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
...+...+.++++.|++ +.|+|..+.+.+.++..+...++++++|+++||+ |+++.++....+
T Consensus 12 ~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 33344445678888887 5899999999999999999999999999999998 988888776544
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.18 E-value=0.00011 Score=71.40 Aligned_cols=150 Identities=8% Similarity=-0.002 Sum_probs=102.7
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHH---HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhH-HHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLT---KAANTLTNFGGTGSLTPLIGAFVADAYAGRFW-TITI 94 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~l~~ 94 (294)
++.|.+...+++.++..+.+|.+..+.|......++-|.. ..+++......+..++.++.|.+.-++ +|-| .+++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 3456777777888888888998888888888777776653 567777788888888889999999876 6644 4456
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhh
Q 022608 95 ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKT 174 (294)
Q Consensus 95 ~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 174 (294)
+.+++.++...++... | .+....+...++.|+|.|...........-..|++ ..
T Consensus 386 ~~~~~ta~~Gama~~~--~------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~------~i 439 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAVR--P------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDE------DI 439 (599)
T ss_pred HHHHHHHHHHHHHHcc--C------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCch------HH
Confidence 6666555444443332 1 12333445566778888887766555555555654 47
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 022608 175 WKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 175 g~~~~~~~~~~~ig~~~~~~~ 195 (294)
|...++......+|+.+|..+
T Consensus 440 g~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 440 GTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHH
Confidence 788877777777777777654
No 232
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.15 E-value=2.5e-05 Score=73.82 Aligned_cols=170 Identities=9% Similarity=-0.058 Sum_probs=121.9
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~ 108 (294)
+..++..+..-.+.+++--+++ +.+-...--|.....-..+-.+.-++.+++..|+ |+-+++..+++...+=.+....
T Consensus 378 ~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHH
Confidence 3333444444444555545554 3443333333223333334445667788999998 9999999998887777766666
Q ss_pred HhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHH-HHHH
Q 022608 109 SAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYF-VMGA 187 (294)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~-~~~i 187 (294)
.. ++|+....-++.|+-.+.++.++.+|+++..|++ .+.++.++.+. ...+
T Consensus 456 L~----------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~------l~at~Q~l~~g~f~Gl 507 (618)
T KOG3762|consen 456 LQ----------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPG------LRATAQGLLQGIFHGL 507 (618)
T ss_pred hc----------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc------chHHHHHHHHHHhccc
Confidence 55 7888888889999999999999999999999998 47777776554 3466
Q ss_pred HHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhcc
Q 022608 188 AILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYP 228 (294)
Q Consensus 188 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 228 (294)
|-.+|.+++|.+...+|-+..|.+.++..++.++.+.....
T Consensus 508 G~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 508 GKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred CcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77788888898888889888898888888777776665543
No 233
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.09 E-value=1.2e-08 Score=96.12 Aligned_cols=180 Identities=14% Similarity=0.077 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
+....+....+..+..+....+...++.+..+.+.. ........+...++.+++.++.||+ |||+.++.+.++..++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 444444455555444433344444444455666666 2233344455556777778999998 9999999998887777
Q ss_pred HHHHH-HHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhcc-CcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 103 MICLT-ISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSG-GIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 103 ~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
.+.+. .....+.- + ...+...+. ...+...+.+ +..+....+.+|.||++ .|+++.+.
T Consensus 330 ~~~~~~~~~~~~~~---------~----~~~~~~~i~-~~~l~~~~~~~g~~~~~~~~~~ElfPt~------~R~~~~~~ 389 (451)
T PF00083_consen 330 SLILGIIFFLGVSS---------S----SWWSILSIV-FLALFFAFFSLGWGPLPWIYTAELFPTK------VRSTGIGL 389 (451)
T ss_pred cccccccccccccc---------c----cccccccce-eeeecccccccccccccccccccccccc------cccccccc
Confidence 66654 11100000 0 000111111 1111212222 33455568889999998 49999999
Q ss_pred HHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHH
Q 022608 181 YYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.+....+++.+++.+..++.+..+-...+.+.+++.++..+...+
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 888888999998888888777666334455544444444443333
No 234
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.04 E-value=8.8e-06 Score=75.48 Aligned_cols=178 Identities=15% Similarity=0.067 Sum_probs=117.6
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHH--------HHHHHHHHHh-hhHHHHHHHHHhhcchhHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAAN--------TLTNFGGTGS-LTPLIGAFVADAYAGRFWTI 92 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~G~laDr~~Grr~~l 92 (294)
+.++-.....|...+++|+...+...-++ ..++.+.+... ...+...+.. .+..++..+.|++ ||++..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 34444445666677777776655555443 34443332222 2222233333 3666777889998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhh
Q 022608 93 TIASIIYQIGMICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQA 171 (294)
Q Consensus 93 ~~~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 171 (294)
+.+.+++.+....+....+ .+ + ....+....+..-++..+..+....+.+|.||++
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~~~----------------~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar----- 438 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQLE----------------N--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR----- 438 (538)
T ss_pred HhhHHHHHHHHHHHcCCccccc----------------c--cCceeehHHHHHHHHhcCCCceeEEeehhhchHH-----
Confidence 9999888777666554331 10 0 1111112222334555566667777789999998
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhhheee-----ccchhhhhhHhHHHHHHHHHHHHH
Q 022608 172 TKTWKYFNWYYFVMGAAILVAVTVLVYIQD-----NIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 172 ~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.|++.-++...+.-+|+.++.....++.+ ..|.++.+++.+.+++++.+.-++
T Consensus 439 -vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 439 -VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred -HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 59999999999999999999999888888 778889999988888777655443
No 235
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.97 E-value=0.00015 Score=71.71 Aligned_cols=83 Identities=18% Similarity=0.209 Sum_probs=67.4
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhhcc--hhHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAG--RFWTITIASII 98 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~G--rr~~l~~~~~~ 98 (294)
+.++...+..++....++++.+++|.|+++++|++..+++++.+...+ +..++.+++|++.||+ + .|+.+.++.++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 355556677888888999999999999999999999999999887776 5678999999999997 7 45677777666
Q ss_pred HHHHHHH
Q 022608 99 YQIGMIC 105 (294)
Q Consensus 99 ~~i~~i~ 105 (294)
.+++.+.
T Consensus 409 ~~~~~~~ 415 (633)
T TIGR00805 409 STLSYLL 415 (633)
T ss_pred HHHHHHH
Confidence 6666544
No 236
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.94 E-value=4.2e-07 Score=79.36 Aligned_cols=136 Identities=12% Similarity=0.129 Sum_probs=110.8
Q ss_pred HHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 022608 42 NTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCE 121 (294)
Q Consensus 42 ~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 121 (294)
-.-+-.+++.+.+++.++..++.++++.-..+..+++|++.||.+|-|+.-++-+.+..+|-++++....
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi---------- 132 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI---------- 132 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH----------
Confidence 3445667777778888888889999999999999999999999999998877777777888877775431
Q ss_pred CccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 122 GEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
....|.+..+|++.|+|.-......+.+..-+|..+| .+-.++++.....+|+.+--.+.+++.+
T Consensus 133 ---------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 133 ---------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred ---------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 1267889999999999988888899999999999985 8889998888888888776666666554
Q ss_pred c
Q 022608 202 N 202 (294)
Q Consensus 202 ~ 202 (294)
.
T Consensus 198 ~ 198 (459)
T KOG4686|consen 198 T 198 (459)
T ss_pred H
Confidence 3
No 237
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.81 E-value=0.00093 Score=53.90 Aligned_cols=112 Identities=12% Similarity=0.190 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 022608 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (294)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
+++......-..+......+..++...+.+++ |.|+.+++|.+.+.+-...... . +
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-~----------------------~ 88 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-P----------------------N 88 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-h----------------------h
Confidence 34444444456666777778888888899997 9999999999887755444322 1 5
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
.+.++.+-++.|+|.+..++....++.+...++ .+++-.+++....+.+..+|.++
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~------~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTEE------TIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH------HHhhHHHHHHHHHHHHHHHHHHH
Confidence 677888888999999999999999999877665 47777776666656665555544
No 238
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.79 E-value=2.1e-05 Score=72.92 Aligned_cols=167 Identities=13% Similarity=0.101 Sum_probs=119.0
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh---cchhHHHHHH-HH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY---AGRFWTITIA-SI 97 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l~~~-~~ 97 (294)
+.++.+..+.+...+++-.=.+++++|++ ..|.+.+-.+.+-....+...+.+|+.|..+||. +||||-.+.. ..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56666777777788888777888999986 6899999999888888999999999999999974 5877655544 44
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 98 IYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 98 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
...++.++...+..+....-+ +...-........++++.-+.=+..-..+.+.-++.+|.....+ +..++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd-----~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~A 180 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGD-----NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTRA 180 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcC-----CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhcc
Confidence 555666665555433222111 00000112344566677777778887888889999999987764 22228
Q ss_pred HHHHHHHHHHHHHHHHHhhhhe
Q 022608 178 FNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l 199 (294)
.+++.....+|+.+|...+++.
T Consensus 181 ns~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 181 NSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred chhHHHHHHhcceeeeeccccc
Confidence 8888889999999988777653
No 239
>PRK03612 spermidine synthase; Provisional
Probab=97.68 E-value=0.0065 Score=58.69 Aligned_cols=159 Identities=11% Similarity=0.036 Sum_probs=88.7
Q ss_pred HHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH---HHHH
Q 022608 30 NEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG---MICL 106 (294)
Q Consensus 30 ~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~---~i~~ 106 (294)
..++..++.-.+...+.-.+...+|-+....+.++++++++..+|+.++++++++. -++. ..+-..+..++ ..++
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~-~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGF-VAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHH-HHHHHHHHHHHHHHHHHH
Confidence 33344444444555666666667899999999999999999999999999887554 2222 22211111111 1111
Q ss_pred HHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHH
Q 022608 107 TISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMG 186 (294)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 186 (294)
...... .......++...++.++..|+..|....+..+.... +.+...+-.|...+
T Consensus 100 ~~~~~~-----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-------~~g~~~g~ly~~nt 155 (521)
T PRK03612 100 YAAFAF-----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-------HLGHNVATVLAADY 155 (521)
T ss_pred HHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------chhhhhhhhHhHHh
Confidence 111100 000112223334455677777666666555443221 14455666777788
Q ss_pred HHHHHHHHhhhhe-eeccchhhhhhHhHH
Q 022608 187 AAILVAVTVLVYI-QDNIGWGWGLGIPTF 214 (294)
Q Consensus 187 ig~~~~~~~~~~l-~~~~g~~~~f~~~~~ 214 (294)
+|+++|.++.+++ ...+|-..+.++.+.
T Consensus 156 lGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 156 LGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 8888888887754 345665434333333
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.66 E-value=0.0013 Score=60.85 Aligned_cols=129 Identities=12% Similarity=-0.051 Sum_probs=88.0
Q ss_pred hHHHHHHHhhhhcCC---CHH----HHHHHHHHHHHHHhhhHHHHHHHHHhhcchh-HHHHHHHHHHHHHHHHHHHHhhc
Q 022608 41 FNTNMISYLTTQLHM---PLT----KAANTLTNFGGTGSLTPLIGAFVADAYAGRF-WTITIASIIYQIGMICLTISAIL 112 (294)
Q Consensus 41 ~~~~l~~yl~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-~~l~~~~~~~~i~~i~~~~~~~~ 112 (294)
.+.++|.|+++..+- +.. -.+...++..+...+..|+-|-++|.. |+| +.+-+..++.++++..++...
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~-- 110 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP-- 110 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC--
Confidence 346788888876544 333 345566777778888899999999998 755 455555666667777776654
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022608 113 PQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (294)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~ 192 (294)
+...++...+..++..++..+.+....+++.+..++++ .++..+.-+....+|+.+.
T Consensus 111 -----------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~ 167 (438)
T COG2270 111 -----------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVIL 167 (438)
T ss_pred -----------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHH
Confidence 11245555666678888989999999999999988874 5555555444555666555
Q ss_pred HHh
Q 022608 193 VTV 195 (294)
Q Consensus 193 ~~~ 195 (294)
-++
T Consensus 168 li~ 170 (438)
T COG2270 168 LIF 170 (438)
T ss_pred HHH
Confidence 443
No 241
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.64 E-value=0.00035 Score=64.89 Aligned_cols=155 Identities=15% Similarity=0.084 Sum_probs=96.9
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 022608 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (294)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (294)
.-|.+...+|.+.....+..++++.+.|.++||. .. |.++++......++...+......+
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~~~~l~~~t~~~----------------- 356 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVGTLMLLTCTLFL----------------- 356 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHhhccC-----------------
Confidence 4578888999999999999999999999999998 44 3444444444445532222222111
Q ss_pred chhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc----hh
Q 022608 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG----WG 206 (294)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g----~~ 206 (294)
...+.++....+.|+...+..|....+..|..-+.. -++-.|..+...++.+.+-.++.+...+..+ +.
T Consensus 357 -~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~ 429 (480)
T KOG2563|consen 357 -GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTF 429 (480)
T ss_pred -CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------CcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCc
Confidence 134455556666788878888888889888754442 3444556666666666666666666666555 33
Q ss_pred hhhhHhHHHHHHHHHHHHHhcccee
Q 022608 207 WGLGIPTFAMFLSIIAFLIGYPLYR 231 (294)
Q Consensus 207 ~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
..-+.......+..++..+.++.++
T Consensus 430 ~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 430 PANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred cchhHhHHHHHHHHHHHhhhhhhHH
Confidence 3333333444445555555555443
No 242
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.64 E-value=0.0056 Score=56.95 Aligned_cols=154 Identities=11% Similarity=0.044 Sum_probs=102.6
Q ss_pred HHHHHHHhhhh-cCCCHHHHHH-HHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 42 NTNMISYLTTQ-LHMPLTKAAN-TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 42 ~~~l~~yl~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
.+++..|+.+. .|++..+... +.-+.........++...+.|.+ |.|++++++.+..++...++....
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 47788999987 8999988764 44555556666677888999998 999999999888777777766655
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
+...+-+.-+..|++.+. .....+++--..|++ +..++.+....+.-+|-.++.+++-.+
T Consensus 93 -------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~------~yq~vts~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 93 -------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKE------HYQKVTSYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred -------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666777776654 445556665555554 466666666666666666666655544
Q ss_pred ee--ccchhhhhhHhHHHHHHHHHHHHH
Q 022608 200 QD--NIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 200 ~~--~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
.. ..++.....+......+++++.++
T Consensus 153 vs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 153 VSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33 334555556666655556554443
No 243
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.53 E-value=0.0003 Score=63.35 Aligned_cols=84 Identities=8% Similarity=-0.168 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeec----------
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDN---------- 202 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~---------- 202 (294)
++..+.++.++.|.|.+..++..++++++..+++ ++++.+++.+....+|..++|++++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIE------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 6788899999999999999999999999999887 488889999999999999999998866521
Q ss_pred ------cchhhhhhHhHHHHHHHHHH
Q 022608 203 ------IGWGWGLGIPTFAMFLSIIA 222 (294)
Q Consensus 203 ------~g~~~~f~~~~~~~~~~~~~ 222 (294)
..|++.|++.+++..+..++
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788888655554443333
No 244
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.53 E-value=0.0072 Score=58.20 Aligned_cols=120 Identities=8% Similarity=0.007 Sum_probs=81.1
Q ss_pred hhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcccccccc
Q 022608 51 TQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEAN 130 (294)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (294)
..+|.+......+... .........+.+-|+. |||.....+..+..++.++..... .
T Consensus 346 ~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~-------------------~ 402 (521)
T KOG0255|consen 346 SGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLP-------------------D 402 (521)
T ss_pred hhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhh-------------------c
Confidence 3455554443333333 4445556668999998 999999999999888888877654 1
Q ss_pred chhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 131 KGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 131 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
....+...+...+..++.+........+.+|.+|+. .|..+.+.......+|++++|.+....
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~------~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 403 DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV------VRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112223333333444445556688999999998 599999999999999999999876443
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.53 E-value=0.012 Score=56.12 Aligned_cols=167 Identities=11% Similarity=0.032 Sum_probs=97.3
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCC-----HHHHHHHHHHHHHHHhhh-HHHHHHHHHhhcchhHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP-----LTKAANTLTNFGGTGSLT-PLIGAFVADAYAGRFWTI 92 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~l 92 (294)
..+++++.+....+|-.+.|+.. --+++.+.++ .....++.....+...+. .++.+++++|+ +|++.+
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf 77 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence 34566666666666666665433 3345666552 345566665555554544 78899999998 999988
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC--CCCCCCCCcccccccc-----------chhHHHHHHHHHHHHHhccCcchhhhhhh
Q 022608 93 TIASIIYQIGMICLTISAILPQ--LRPPPCEGEQVCQEAN-----------KGQVAILYVSLLLAALGSGGIRPCVVAFG 159 (294)
Q Consensus 93 ~~~~~~~~i~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 159 (294)
.+-...+.....++++.- .|. ...+.-.-+......+ .+....+++..=+ .|.-..+-...+++
T Consensus 78 ~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el--w~~~vvS~lFW~fa 154 (472)
T TIGR00769 78 YTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL--WGSVVLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 887777666666655542 111 1000000000000000 0111122222212 22222223678899
Q ss_pred hcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhee
Q 022608 160 ADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ 200 (294)
Q Consensus 160 ~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~ 200 (294)
+|.+..+ +..|.++.+..+.|+|..+++.+..++.
T Consensus 155 ndi~t~~------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTID------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 4888999999999999999998877654
No 246
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.51 E-value=0.0015 Score=59.72 Aligned_cols=151 Identities=12% Similarity=0.106 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHh-hhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc-hhHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYL-TTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG-RFWTITIASIIYQ 100 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-rr~~l~~~~~~~~ 100 (294)
..+.++....+...-.|....+...++ .+.+|+++.+.|.+.+...+.+.+.+..-.+..||..| -+-.+..++++++
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 444455444444444444444455555 35789999999999999999999999988899998733 3444444444444
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 101 IGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 101 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
-..+++.... ....++.+..+..+..+...++...++....|.. +||+..|.
T Consensus 341 P~~llls~~~----------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~------qrG~~~Gi 392 (451)
T KOG2615|consen 341 PAFLLLSLAR----------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQS------QRGTLNGI 392 (451)
T ss_pred HHHHHHhccc----------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcc------cchHHHHH
Confidence 4444444333 4567788888888988888999999999999988 59999999
Q ss_pred HHHHHHHHHHHHHHhhhheee
Q 022608 181 YYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 181 ~~~~~~ig~~~~~~~~~~l~~ 201 (294)
......++-++||.+.|.+..
T Consensus 393 ~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 393 FRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999987754
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.50 E-value=0.0071 Score=57.95 Aligned_cols=120 Identities=13% Similarity=-0.005 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhhcchh-H------HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccch
Q 022608 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRF-W------TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKG 132 (294)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-~------~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (294)
.++..+.-.+...+.+|+.+++-.|. +|| + =+.+|+++..++...+.+...... .....
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~-------------~~~~~ 375 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSA-------------MYGHS 375 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC-------------CCCCc
Confidence 45556665666666677766775554 332 1 155677777788777766542111 00113
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHhhhhe
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-GAAILVAVTVLVYI 199 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~-~ig~~~~~~~~~~l 199 (294)
+.+.+++..++.++|.-...|...+++++..|++ -+|..++.++... .+|..++..+.+..
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~------~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG------VTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555677778889999999999999999999998 5999999987743 67777776665554
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.45 E-value=0.0022 Score=62.66 Aligned_cols=173 Identities=15% Similarity=0.085 Sum_probs=109.5
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhc-CCCHHH--HHHHHHHHHHHHhhhHHHHHHHHHhhcchhH--------
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL-HMPLTK--AANTLTNFGGTGSLTPLIGAFVADAYAGRFW-------- 90 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------- 90 (294)
..+|.++...+|..-+-..+..++ .++-+.+ |.+..+ ..+.+++..+..++|.+..|.++... -||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~-~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNA-RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecH-HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-Hhhccccccchh
Confidence 467777766666544444444444 3344556 663322 33378999999999999999988332 2222
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh
Q 022608 91 -TITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK 169 (294)
Q Consensus 91 -~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 169 (294)
.+.+..+ +.++.+++++.. | ...++++-++.|++.|..++...+..+|+|. ++
T Consensus 431 ~~l~~~~~-~~~~~lll~~~~--p--------------------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~-- 484 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLTL--P--------------------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KD-- 484 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHC--C--------------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc--
Confidence 2223333 555555555543 1 1568888999999999999999999999999 53
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHH-HHhhhheeec----c------c---hhhhhhHhHHHHHHHHHHHHHh
Q 022608 170 QATKTWKYFNWYYFVMGAAILVA-VTVLVYIQDN----I------G---WGWGLGIPTFAMFLSIIAFLIG 226 (294)
Q Consensus 170 ~~~~rg~~~~~~~~~~~ig~~~~-~~~~~~l~~~----~------g---~~~~f~~~~~~~~~~~~~~~~~ 226 (294)
.|+.++..+...-+|+.+- -.+.|.+-+. . | ++.+|.+.+.+..++.+.-...
T Consensus 485 ----~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 485 ----PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred ----hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 7777777777777776654 2344544321 1 2 5567777766666665554433
No 249
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.27 E-value=0.0039 Score=44.76 Aligned_cols=71 Identities=4% Similarity=0.036 Sum_probs=60.4
Q ss_pred HHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 022608 38 VVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISA 110 (294)
Q Consensus 38 ~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~ 110 (294)
-+.++. +.+.++++.++|..+++++.+.-.+++.+|.+...++.++. .+++.+..+.++..+.++.+.+..
T Consensus 8 RFayTp-lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 8 RFAYTP-LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHh-HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444 45666788999999999999999999999999999999986 888999999988888888888765
No 250
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.22 E-value=0.0029 Score=60.08 Aligned_cols=151 Identities=13% Similarity=0.155 Sum_probs=114.8
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHH-HHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNT-NMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 98 (294)
+.|..+.+..+.+.....-.+-.. .++.|+...++++..+.+...+.......++.++..++--+.+|-++++..|++.
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 345555555555544444332222 4567888899999999999999999999999998875444445999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHH
Q 022608 99 YQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYF 178 (294)
Q Consensus 99 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~ 178 (294)
-.++..+.+++. +.|+.+...++.++ .+...+..-++.+-+.+++ ++|+.+
T Consensus 318 ~~~~~~~~af~~----------------------~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~------e~g~v~ 368 (463)
T KOG2816|consen 318 EFLQLLLFAFAT----------------------ETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPE------EQGKVF 368 (463)
T ss_pred HHHHHHHHHHhc----------------------cchhhhHHHHHHHh-hcchhHHHHhHHHhhcccc------cccchh
Confidence 999999888877 67777777666544 4556777888888888888 499999
Q ss_pred HHHHHHHHHHHHHHHHhhhhe
Q 022608 179 NWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 179 ~~~~~~~~ig~~~~~~~~~~l 199 (294)
++.+....+.+.++|.+-+.+
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHH
Confidence 999999999888888876554
No 251
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.00065 Score=59.32 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=70.1
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 022608 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEG 122 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~ 122 (294)
.....|+-+.+++...+.+.+......-.++...+.|-|+|+. |||+.-...++.+ ++..+..+-
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitY----iLsCiTKhS---------- 121 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITY----ILSCITKHS---------- 121 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHH----HHHHHhhcC----------
Confidence 3344666678899999998888777778888888899999998 9999665544444 444344322
Q ss_pred ccccccccchhHHHHHHHHHHHHHhccCcchhhhh-hhhcccCCC
Q 022608 123 EQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVA-FGADQFDET 166 (294)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~ 166 (294)
.++-+++++|++-|+......+..-+ +++|.-.++
T Consensus 122 ---------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr 157 (454)
T KOG4332|consen 122 ---------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKR 157 (454)
T ss_pred ---------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhcc
Confidence 26677889999999888776655433 455655443
No 252
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.73 E-value=0.0023 Score=60.64 Aligned_cols=196 Identities=8% Similarity=-0.005 Sum_probs=125.3
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHH--HHHHHHHhh--cchhHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPL--IGAFVADAY--AGRFWTIT 93 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~G~laDr~--~Grr~~l~ 93 (294)
+..|+..+.++...+...+.+..+.+..+.+.+..++++..++-...+.......+... ......-|+ +.+|..++
T Consensus 258 ~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~ 337 (488)
T KOG2325|consen 258 KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIIL 337 (488)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeee
Confidence 45778888888899999998888778777787788899888876666555554443332 222222332 13455555
Q ss_pred HHHHHHHHHHHHHHH-HhhcC----CCC--CCCCC--CccccccccchhHHHHHHHH-HHHHHhccCcchhhhhhhhccc
Q 022608 94 IASIIYQIGMICLTI-SAILP----QLR--PPPCE--GEQVCQEANKGQVAILYVSL-LLAALGSGGIRPCVVAFGADQF 163 (294)
Q Consensus 94 ~~~~~~~i~~i~~~~-~~~~~----~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~ 163 (294)
.++++......+... ....+ .+. ...|. .+.-|++.+......++++. ++.|++.-.+.....++-+|+.
T Consensus 338 ~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiL 417 (488)
T KOG2325|consen 338 LGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKIL 417 (488)
T ss_pred ehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHh
Confidence 553333332222221 11011 111 12232 34567887777777776664 4557777777788889999999
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 164 ~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
.+++ .+...+++.....++..++|++...+-...|.++.+.+.....++.
T Consensus 418 gp~~------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 418 GPRD------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred CCcc------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 9985 8888888888888899999988777767777776665555544333
No 253
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.58 E-value=0.0022 Score=61.01 Aligned_cols=65 Identities=14% Similarity=0.172 Sum_probs=52.1
Q ss_pred HhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 36 LAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 36 ~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+-.+...++.|+. ++|+++++.+.++....++.+++.|++|++|||+ -++|.++++.++..+.
T Consensus 25 ~~~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 25 ARFGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVT 89 (618)
T ss_pred ecccccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHH
Confidence 333456677888885 6999999999999999999999999999999999 6666666665554443
No 254
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.57 E-value=0.19 Score=47.39 Aligned_cols=138 Identities=12% Similarity=0.014 Sum_probs=104.0
Q ss_pred hhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 022608 40 GFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPP 119 (294)
Q Consensus 40 ~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~ 119 (294)
+.-..+..|+..+ |+++...+..-+...+....+.++..++.+|+ |..|+=+++.....++..+...+-..|.-.
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~--- 350 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSP--- 350 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCC---
Confidence 3345578888766 99999999999999999999999999999998 999988888877766665555443222100
Q ss_pred CCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhh
Q 022608 120 CEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLV 197 (294)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~ 197 (294)
+ ...+...++.+.++.=+|.=++.-+...++-|..|++ +||...+..+...++..++...++-
T Consensus 351 ------~---~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~------~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 351 ------F---SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPES------ERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred ------c---hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHH------HhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1224555666666666777778888999999999987 5999999988888888887766544
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.53 E-value=0.069 Score=50.58 Aligned_cols=102 Identities=10% Similarity=0.134 Sum_probs=78.4
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHH
Q 022608 63 TLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLL 142 (294)
Q Consensus 63 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (294)
-..+......+..++++.+.|+. |.|+.+.++...+.+-.+..... +.+.++++-.
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-----------------------N~y~~yfssa 110 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-----------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-----------------------chHHHHHHHH
Confidence 36777788889999999999998 99999999998887766555442 5677888889
Q ss_pred HHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 022608 143 LAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVT 194 (294)
Q Consensus 143 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~ 194 (294)
+.|+|.+..+.-...+.+|...++ ...+-.+........+..+|..
T Consensus 111 llG~Gaallw~GqG~ylt~~st~~------tie~Nisi~Wai~~~~li~Ggi 156 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTRE------TIERNISIFWAIGQSSLIIGGI 156 (461)
T ss_pred HhhhhHHheecccceehhhcCChh------hHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999999988776 3555555544444444444433
No 256
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.37 E-value=0.043 Score=54.55 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHH-HhhhHHHHHHHHHhh-cchhHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGT-GSLTPLIGAFVADAY-AGRFWTITIASII 98 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~laDr~-~Grr~~l~~~~~~ 98 (294)
.....++...++...+.++.+++|-|+.++++.+...+..+++...+. ..+|.+++|++.-|+ +..|.+..+.++.
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 444455778888999999999999999999999999999999776664 457778999999886 2344444444333
No 257
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.21 E-value=0.0012 Score=63.97 Aligned_cols=172 Identities=13% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhh-cchhHHHHHHHHHHHHH
Q 022608 25 PFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGG-TGSLTPLIGAFVADAY-AGRFWTITIASIIYQIG 102 (294)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Grr~~l~~~~~~~~i~ 102 (294)
....+...++.+...++.+++|.|++.+|++++.+++.+.+...+ +..+|.+++|++..|+ ++.|+.+....+..+++
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 334466677788888899999999999999999999999887776 5568889999999987 33445444444443333
Q ss_pred HHH---HHHH-hhcCCC--CC----------CCCCC----------------ccccccccchhHHHHHHHHHHHHHhccC
Q 022608 103 MIC---LTIS-AILPQL--RP----------PPCEG----------------EQVCQEANKGQVAILYVSLLLAALGSGG 150 (294)
Q Consensus 103 ~i~---~~~~-~~~~~~--~~----------~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 150 (294)
.+. ..+. -..+.+ .+ ..|.. ...|...=......+.+..++..+..+.
T Consensus 388 ~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~ 467 (539)
T PF03137_consen 388 VILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFM 467 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHh
Confidence 332 1111 000000 00 00110 1133333112334444444554555555
Q ss_pred cchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHhhhheeec
Q 022608 151 IRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-GAAILVAVTVLVYIQDN 202 (294)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~-~ig~~~~~~~~~~l~~~ 202 (294)
.........-...++++ |+-+.++..+.. -+|..-||++.|.+.|.
T Consensus 468 ~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 468 SQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------------------------------------------
T ss_pred cccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 55555666667788874 888888866544 55777889998888774
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.11 E-value=0.18 Score=47.92 Aligned_cols=140 Identities=15% Similarity=0.033 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhcchh-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 022608 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRF-------WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (294)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr-------~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
.+..+.=.+...+.+|+..++--+. +++ .-+-++..++..+.+++...... . ...++..+
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~-~-----------~~~~~~~s 393 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIW-F-----------GGPSGLVS 393 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHh-h-----------cCCCCCcC
Confidence 3445555555556666666666664 433 22334555555565555544100 0 00023446
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhee------eccchhh
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQ------DNIGWGW 207 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~------~~~g~~~ 207 (294)
.+.++...+++++|.=+.+|...++++...|++ -.+..++.+.+....|..++..+.+... +......
T Consensus 394 ~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~------~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~ 467 (498)
T COG3104 394 VWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA------LKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGR 467 (498)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH------HHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhh
Confidence 778888889999999999999999999999997 5888888888888888887766655311 2223445
Q ss_pred hhhHhHHHHHHH
Q 022608 208 GLGIPTFAMFLS 219 (294)
Q Consensus 208 ~f~~~~~~~~~~ 219 (294)
.|+..+...++.
T Consensus 468 ~F~~~g~v~i~~ 479 (498)
T COG3104 468 VFGTIGVVAIVI 479 (498)
T ss_pred hHHHHHHHHHHH
Confidence 565555544333
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.87 E-value=0.067 Score=49.78 Aligned_cols=165 Identities=16% Similarity=0.155 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHhhhhcC------C----C------------H-HHHHHHHHHHHHHHhhhHHHHHHHHH
Q 022608 27 IFSNEVCEKLAVVGFNTNMISYLTTQLH------M----P------------L-TKAANTLTNFGGTGSLTPLIGAFVAD 83 (294)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~------~----~------------~-~~~~~~~~~~~~~~~~~~~~~G~laD 83 (294)
.++..+++|+.|..+.+-...-+.++.+ . + . -..+.+...-.+-..+.-+++-+..+
T Consensus 5 fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~ 84 (402)
T PF02487_consen 5 FWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFIH 84 (402)
T ss_pred HHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhhh
Confidence 3466777888877666655555542111 0 0 0 11122333333344444556666778
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhccc
Q 022608 84 AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQF 163 (294)
Q Consensus 84 r~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 163 (294)
|+ .-+.-+.+..++..+|+++.+++. +.++-+++.++.+++.|..+....++.. .+
T Consensus 85 ~v-~y~~Ri~~~~~l~~~g~l~va~~~----------------------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 85 RV-PYWIRILICVALSAAGMLLVAFSP----------------------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hc-cchHHHHHHHHHHHHHHhheeecc----------------------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 76 544444455556777777776654 5667778888999999998888777644 45
Q ss_pred CCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee-ccchhhhhhHhHHHHHHHHHHHHH
Q 022608 164 DETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD-NIGWGWGLGIPTFAMFLSIIAFLI 225 (294)
Q Consensus 164 ~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~ 225 (294)
++. ..+.+..+...++.+|+..-..+.+ ..+.+.++.+...+.++-++.+++
T Consensus 141 ~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~ 193 (402)
T PF02487_consen 141 GKS----------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFF 193 (402)
T ss_pred Ccc----------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 543 1344444555666666654333333 223455666655554444444433
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.40 E-value=0.19 Score=47.31 Aligned_cols=128 Identities=11% Similarity=0.036 Sum_probs=67.7
Q ss_pred hcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcch-------hHHHHHHHHHHH---HHHHHHHHHhhcCCCCCCCCC
Q 022608 52 QLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGR-------FWTITIASIIYQ---IGMICLTISAILPQLRPPPCE 121 (294)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-------r~~l~~~~~~~~---i~~i~~~~~~~~~~~~~~~~~ 121 (294)
-.|.+..+......+...+..+|.++||.++|++ -| .+.=.+.+.+.+ +..+.+.... +
T Consensus 277 ~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~-~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~--~-------- 345 (493)
T KOG1330|consen 277 LIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL-SRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAF--T-------- 345 (493)
T ss_pred HhCCccccchhhhhHHHhhchhhheehHHHHHHH-HHhcccccchhHHHHHHhhhhhHHHHHHHHHHhh--h--------
Confidence 3455555566667777888889999999999994 22 121111111111 1111111111 0
Q ss_pred CccccccccchhHHHHHHHHHHHHHh-ccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHhhhhe
Q 022608 122 GEQVCQEANKGQVAILYVSLLLAALG-SGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM-GAAILVAVTVLVYI 199 (294)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~g~g-~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~-~ig~~~~~~~~~~l 199 (294)
. .+.+ +....+++|.- .-..++....+..|..|++ +|..++++..... .+|.+-+|.+.|.+
T Consensus 346 -----~----~s~~-~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~------~Rt~a~a~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 346 -----S----SSMI-FGLILFLVGETISWFNWATNNPIFLEVVPPS------RRTTAYALDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred -----h----HHHH-HHHHHHHHHHHHHhcccccccceeeEecCcc------cccHHHHHHHHHHHHhccCCCcceehhH
Confidence 0 0111 11112222221 2223445566778888888 6999998876654 44555556577777
Q ss_pred eecc-chh
Q 022608 200 QDNI-GWG 206 (294)
Q Consensus 200 ~~~~-g~~ 206 (294)
.++. ||+
T Consensus 410 sd~l~g~~ 417 (493)
T KOG1330|consen 410 SDKLRGYK 417 (493)
T ss_pred HHHhhCCC
Confidence 6643 555
No 261
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.14 E-value=1.2 Score=42.27 Aligned_cols=116 Identities=18% Similarity=0.136 Sum_probs=68.4
Q ss_pred HHHHHhhhHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHH
Q 022608 67 FGGTGSLTPLIGAFVADAY--AGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLA 144 (294)
Q Consensus 67 ~~~~~~~~~~~~G~laDr~--~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (294)
...+..++..+.+.+++|. +||++.+.++..+..++.++..+.. |.-.+.+=-.+++.. ...+.....+.-++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~~~~~~--~~~~~~~~~ii~~l~ 363 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTDSPPLL--FTPSYYLALIIGFLL 363 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCcccccc--cccchhHHHHHHHHH
Confidence 3334445556666676553 4889999999888888777666543 221110000000000 011344455556778
Q ss_pred HHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 022608 145 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAV 193 (294)
Q Consensus 145 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~ 193 (294)
|++-+........++++.+|.+ |..+++++-....+++.++.
T Consensus 364 G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 364 GFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred hhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999664 66666665555555554443
No 262
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.84 E-value=1.1 Score=41.55 Aligned_cols=156 Identities=14% Similarity=0.082 Sum_probs=92.2
Q ss_pred cCCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHH-----hhcchh
Q 022608 17 QKGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGS--LTPLIGAFVAD-----AYAGRF 89 (294)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~laD-----r~~Grr 89 (294)
.++..+.+..+++.-..+.+-+ +....+|..++ .-|.|-++.+.. ...+. -.-+++.++-| |+ |||
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~f----S~ay~P~sLKllWaPiVDs~y~k~~-Grr 98 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIF----SFAYWPFSLKLLWAPIVDSVYSKRF-GRR 98 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhh----hhhhhHHHHHHHHHhhhHHHHHHhh-ccc
Confidence 3456678888888888887764 45555666665 567887776533 33333 34468889999 76 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChh
Q 022608 90 WTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPK 169 (294)
Q Consensus 90 ~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 169 (294)
|.-++=+ -+.+|..+..++...+.... +.....+........++.-+..+.....+-...-.+..++
T Consensus 99 ksWvvp~-q~llG~~mllLs~~v~~~~g---------~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e--- 165 (510)
T KOG3574|consen 99 KSWVVPC-QYLLGLFMLLLSYLVDRGLG---------GNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRE--- 165 (510)
T ss_pred cceeeeh-HHHHHHHHHHHhhCCCcccc---------cCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHh---
Confidence 8765533 34456666666552221110 0011123333333445556666666666666666666655
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 170 QATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 170 ~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
..|-+......+.+.|-+++..+
T Consensus 166 ---~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 166 ---NLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred ---hcCchhHHHHHHHhhhHHhhcce
Confidence 36666666666777777776654
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.61 E-value=4 Score=38.57 Aligned_cols=187 Identities=9% Similarity=-0.090 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIG 102 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~ 102 (294)
..+.+....++.++.-=+...-.+.|+.+.+.-+.--.+.....-.+...+.++.-|.+.||. .|.+++..+.+..-++
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHH
Confidence 345555666666666555666677788776655656666666667777778888889999998 8988877765544322
Q ss_pred H----HHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHH-HHhccCcchhhhhhhhcccCCCChhhhhhhhhH
Q 022608 103 M----ICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLA-ALGSGGIRPCVVAFGADQFDETDPKQATKTWKY 177 (294)
Q Consensus 103 ~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~ 177 (294)
. +++......+.. ..........+++...+. .+..=.......+.=-|+...-..+.+..+.+.
T Consensus 82 v~~s~~~~~~l~~~~~~-----------~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~ 150 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSS-----------SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARM 150 (432)
T ss_pred HHHHHHHHHHHHhCCcc-----------ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHH
Confidence 2 222211101110 000011122222222222 111111111222222333221111111245555
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHH
Q 022608 178 FNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSII 221 (294)
Q Consensus 178 ~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 221 (294)
.+..--.=.+--.++|++.|.+.+..+......+.++..+++.+
T Consensus 151 NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 151 NATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 55554445567789999999998877877666666665555544
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.44 E-value=0.19 Score=47.42 Aligned_cols=130 Identities=5% Similarity=-0.113 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhH
Q 022608 55 MPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQV 134 (294)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (294)
+++.-.+.+..+..++..++..+....--+. .-|+++....++.++..+.-.+.. ...+.. -+. + ..
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~lv--~~~n~~-------~Gi-~--d~ 318 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLLV--TRWNLD-------LGI-P--DQ 318 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEEE--EEEeee-------eCc-C--Ce
Confidence 7777666666555555555555544433333 456666665554443332211110 000000 000 0 11
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc
Q 022608 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI 203 (294)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~ 203 (294)
+..+..-++..+..+...-+...+.+|+.|+.. -|+.++......|+|..++..++..+.+..
T Consensus 319 ~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 319 WFALGDTILEEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 112222233444444445566778899999984 788888887778888887777766655433
No 265
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.26 E-value=11 Score=36.09 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=54.3
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHH
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFL 218 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~ 218 (294)
++.++.....+..--..+.+.+|+++ .|+..++-++...++.+.+..++.+.+.+..||..+..+..+++++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34456666666677778888888765 6899999988888888876666668899999999777666665544
No 266
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.90 E-value=3.4 Score=38.63 Aligned_cols=61 Identities=11% Similarity=0.005 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhhe
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYI 199 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l 199 (294)
+.+.+++..+..|+..|....+....+.|..+++ .|.-.++...++-++|..++.+++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~------~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE------DREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5666666777789999999999999999987776 488888888888888887777665443
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.41 E-value=12 Score=34.90 Aligned_cols=127 Identities=11% Similarity=0.073 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc---hhHHHHHHHHHH
Q 022608 23 TMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAG---RFWTITIASIIY 99 (294)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G---rr~~l~~~~~~~ 99 (294)
..+..+......-..+..+.+.-+.|-....+-+. +......+.....+..++.-.+--+. . |+++........
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~-~~~~~~~~~~~l~~~~ 95 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFL-NTRLRTRVGYLLSLIA 95 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 44444455555556666666555444433333333 44455555555555444444443333 2 222222222222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 022608 100 QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (294)
Q Consensus 100 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (294)
++..+.+.++.... +....+.....++..++.+++.|..+.......++ +|.+
T Consensus 96 il~i~~l~~~~v~~-------------~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 96 ILFIVTLDLALVKT-------------DTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred HHHHHHHHHHhhcc-------------CCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 22222222221000 11123355566667778888888888887777777 5654
No 268
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=89.87 E-value=5.5 Score=36.24 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=61.4
Q ss_pred chHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 022608 22 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI 101 (294)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i 101 (294)
|..+ ++-+.+...+..|.-..++...... +....+ ............++.+.+..++ |-|+++.++...+..
T Consensus 29 knv~-i~s~~fl~~f~a~~gl~nlq~~vn~----~lg~~s--l~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 29 KNVL-ILSIAFLLTFTAYLGLQNLQTSVNY----DLGTVS--LGALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVFPYAL 100 (390)
T ss_pred hhhh-HHHHHHHHHHHHHHHHHHHHHHHhc----Ccccch--hhhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence 4433 4445555555555444455444332 222222 1122223334445555666665 999999887655443
Q ss_pred HHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 022608 102 GMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (294)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (294)
.. +.++ ...+..++.+-+..|+|.+..++.-.+|++++-..+
T Consensus 101 yi-----A~Nl------------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 101 YI-----AANL------------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred HH-----Hhhc------------------chhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 32 2211 114455666667779999988887777776654443
No 269
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=89.71 E-value=8.8 Score=38.36 Aligned_cols=184 Identities=11% Similarity=-0.051 Sum_probs=114.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchh
Q 022608 54 HMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQ 133 (294)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (294)
+...........++....++..+.....+|-.-|+-.....-.+.++++.+...+.. +++. .....
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a~-------------~~~~~ 81 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGAI-------------PSSGH 81 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hccC-------------ccccc
Confidence 334445666778888888888888999999885555566666666666666665554 2210 01111
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccc-hhh-----
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIG-WGW----- 207 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g-~~~----- 207 (294)
.....+..+.+.++.++..++-+.+.+++.+..+ ...+.+..++|++....+.+ |.+++..+..... +..
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~ 157 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQ 157 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccC
Confidence 3445567777888888888999999999887763 33355788899988877765 4555555554443 321
Q ss_pred -hhhHhHH-HHHHHHHHHHHhccceeccCCCCChhHHHHHHHHHHHHhCc
Q 022608 208 -GLGIPTF-AMFLSIIAFLIGYPLYRNLDPAGSPFTRLLQVCVAAFRKRK 255 (294)
Q Consensus 208 -~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (294)
.|..... ..++.++.++.+...++.-++.+.......++.+......+
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~ 207 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR 207 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH
Confidence 2333333 34444555556555556666666655556666655555544
No 270
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.70 E-value=0.83 Score=43.10 Aligned_cols=86 Identities=7% Similarity=-0.127 Sum_probs=54.2
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCH----------------HHHHHHHHHHHHHHhhhHHHHHHH
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPL----------------TKAANTLTNFGGTGSLTPLIGAFV 81 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~G~l 81 (294)
..++.++.+....++..++++...-+.+.++-+ .++=|+ ..-.+-..+......+.+....++
T Consensus 276 ~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l 355 (498)
T KOG0637|consen 276 VMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKL 355 (498)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 456788888999999888887776666666533 222211 112334455566677788888999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHH
Q 022608 82 ADAYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 82 aDr~~Grr~~l~~~~~~~~i~~i~ 105 (294)
.+|+ |-|+.+..+...+.++..+
T Consensus 356 ~~~~-g~r~~y~~~~~~f~~~~~~ 378 (498)
T KOG0637|consen 356 SRKF-GTRKRYWGGVNAFGLATGL 378 (498)
T ss_pred HHhc-CcceEEeehhHHHHHHHHH
Confidence 9998 8555555554434444333
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.60 E-value=24 Score=34.00 Aligned_cols=169 Identities=9% Similarity=0.022 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhc---CCCHHHHHHHHHHHHH-HHhhhHHHHHHHHHhhcchhHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL---HMPLTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT 93 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~ 93 (294)
+..+++++.+.+..++..+.+. +.--+++.+ ..++.....+-....+ +..+...+-.+++|++ +|.++..
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~-----~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYT-----ILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 3566777777777666655432 222233322 2234444444433333 4445567789999998 9999888
Q ss_pred HHHHHHHHHHHHHHHHhhcCC--CCCCC--CCCcccccccc---------chhHHHHHHHHHHHHHhccCcchhhhhhhh
Q 022608 94 IASIIYQIGMICLTISAILPQ--LRPPP--CEGEQVCQEAN---------KGQVAILYVSLLLAALGSGGIRPCVVAFGA 160 (294)
Q Consensus 94 ~~~~~~~i~~i~~~~~~~~~~--~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 160 (294)
+....+.....+.++.- +|. ...+. +..+.....+. .+....+++..=+ .|.-...-.-..+..
T Consensus 94 ~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aEl--wgsvvlSlLFW~fAN 170 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAEL--WGSVVLSLLFWGFAN 170 (491)
T ss_pred HHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 77666666555555432 232 00000 00000000000 0011112211111 121122234578889
Q ss_pred cccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 161 DQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 161 ~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
|.+..+ +..+.++.+..+.|+|..++..+..++.+
T Consensus 171 ~itt~~------eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 171 EITTVE------EAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred hcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888 48889999999999999988877666555
No 272
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.13 E-value=12 Score=33.35 Aligned_cols=138 Identities=11% Similarity=0.078 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhcchh--HHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCccccccccchhHHHH
Q 022608 61 ANTLTNFGGTGSLTPLIGAFVADAYAGRF--WTITIASIIYQIGMICLTISAI-LPQLRPPPCEGEQVCQEANKGQVAIL 137 (294)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~l~~~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
|.+...+++..++|+-+...+..|- ..| ..+.+..++.++...+..+... .| ...++..-
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP----------------~kes~~~s 347 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSP----------------SKESPSES 347 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCC----------------CcCCchHH
Confidence 5566677777666666666665543 221 3444444444433333322220 11 12234444
Q ss_pred HHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHH
Q 022608 138 YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMF 217 (294)
Q Consensus 138 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 217 (294)
.++.+++-...|.++|.+.-+=.+..|++ .|++.+.++-.=.++..-++....-.-....+-+..|.++.++..
T Consensus 348 ~i~F~~~E~cvGlfwPSimkmRsqyIPEe------arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~ 421 (454)
T KOG4332|consen 348 LIGFCLFEACVGLFWPSIMKMRSQYIPEE------ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLF 421 (454)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHhhCCHH------HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHH
Confidence 56666777888899999888888888887 588888887765555444332111011112345567777777665
Q ss_pred HHHH
Q 022608 218 LSII 221 (294)
Q Consensus 218 ~~~~ 221 (294)
++.+
T Consensus 422 ~a~i 425 (454)
T KOG4332|consen 422 VASI 425 (454)
T ss_pred HHHH
Confidence 5543
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.00 E-value=7.2 Score=36.92 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
+-+..++..++.|+..|-..+....+..+..+++ +|..+..+...+..+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~------e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH------EREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555677889999988888888888887665 35555555555666666665543
No 274
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.97 E-value=30 Score=33.25 Aligned_cols=169 Identities=9% Similarity=-0.015 Sum_probs=99.1
Q ss_pred CCCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCC---HHHHHHHHHHHHH-HHhhhHHHHHHHHHhhcchhHHHH
Q 022608 18 KGGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMP---LTKAANTLTNFGG-TGSLTPLIGAFVADAYAGRFWTIT 93 (294)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~ 93 (294)
+..++++..+.+..+|..+.++. .--+++.+.++ +.....+-....+ ++.+..++-+++.+++ .|.++..
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~-----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNL-----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 34667777777777777665442 23344544443 3444445444444 5667778889999998 8999888
Q ss_pred HHHHHHHHHHHHHHHHhhcCC--CCCCC-CCC------cccc-----ccccchhHHHHHHHHHHHHHhccCcchhhhhhh
Q 022608 94 IASIIYQIGMICLTISAILPQ--LRPPP-CEG------EQVC-----QEANKGQVAILYVSLLLAALGSGGIRPCVVAFG 159 (294)
Q Consensus 94 ~~~~~~~i~~i~~~~~~~~~~--~~~~~-~~~------~~~~-----~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 159 (294)
+-+..+....+++++.- +|. ...+. ... +++- ..-+.+....+++.-=+.| .-..+-.-..+.
T Consensus 97 ~~~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg--slV~S~lFw~fa 173 (509)
T COG3202 97 IILGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG--SLVLSLLFWQFA 173 (509)
T ss_pred HHHHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 87777777777776654 221 11100 000 0000 0001122233333222221 112223557788
Q ss_pred hcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 160 ADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 160 ~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
.|++..+ +..|++..++...|++..++..+..++..
T Consensus 174 Neitt~~------eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 174 NEITTIE------EAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHhhhHH------HhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8988887 48899999999999999998888777655
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.65 E-value=37 Score=32.18 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (294)
..+..++..++.|++.+..++...++.+ .+|++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 4556666677889999998888888777 46754
No 276
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=83.23 E-value=16 Score=26.97 Aligned_cols=45 Identities=16% Similarity=0.111 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 022608 59 KAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMI 104 (294)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i 104 (294)
..+.......++..+++.+.|++.|.. |.+..+.+...+..++.+
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFI 132 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHH
Confidence 344555666777788888999999987 877776665555444433
No 277
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=81.27 E-value=23 Score=34.14 Aligned_cols=93 Identities=16% Similarity=0.082 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH
Q 022608 62 NTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL 141 (294)
Q Consensus 62 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (294)
..-.+..+.+.+..+..|++-.++ .+.--+.++..-.+-+. ++.++. ...+.|..+++-
T Consensus 302 ~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~g-ll~~m~-------------------~t~~Iw~~Y~~y 360 (511)
T TIGR00806 302 AVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAG-LVFWMS-------------------QSHDIWVLYVTY 360 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHH-Hhhhhh-------------------cccchHHHHHHH
Confidence 344555666777888888886664 44333333322222222 222222 123888888988
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHH
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWY 181 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~ 181 (294)
++.+.......+....-++.....+ ..|..+|+-
T Consensus 361 vlf~~~y~flitia~~~iA~~L~~~------~~aLvFGiN 394 (511)
T TIGR00806 361 VLFRGIYQFLVPIATFQIASSLSKE------LCALVFGIN 394 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc------ceEEEEecH
Confidence 8888888887787777777776665 467777653
No 278
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.99 E-value=59 Score=31.35 Aligned_cols=73 Identities=7% Similarity=0.132 Sum_probs=51.4
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
+..|+.....+..--..+.+.+|+.+ .+...+|-++...++-+.+-.++++.+.+..||..+-.+..+++++.
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 34456666666666677778888765 57888888777777766666677788889999997766655544443
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.85 E-value=13 Score=27.70 Aligned_cols=34 Identities=21% Similarity=0.014 Sum_probs=22.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHH
Q 022608 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITIASI 97 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 97 (294)
++.=.+...+.....||+-|+++|-.+.-++..+
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 3344445555666778999999997765555433
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=72.55 E-value=28 Score=32.54 Aligned_cols=110 Identities=8% Similarity=0.020 Sum_probs=60.5
Q ss_pred HHHHHHHhhhhcCCC---HHHHHHHHHH-HHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 022608 42 NTNMISYLTTQLHMP---LTKAANTLTN-FGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQLRP 117 (294)
Q Consensus 42 ~~~l~~yl~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~ 117 (294)
.+.+|.+..+..+-. .--.-.+..+ +++...+|.+...++-++ +||+..+. .++-.+..-++.+.. .|.+
T Consensus 263 LsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~-v~lR~lfiPlF~~cn-~~~~-- 336 (406)
T KOG1479|consen 263 LSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIP-VLLRLLFIPLFLLCN-YPPL-- 336 (406)
T ss_pred eEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHH-HHHHHHHHHHHHHhc-cCCC--
Confidence 346777776544222 2223334444 677777776666666654 34444333 333333322222222 2111
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCC
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGADQFDETD 167 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 167 (294)
..--.+-+.++....++|+..|-..++...+..+..++++
T Consensus 337 ----------~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 337 ----------PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred ----------CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 0011234555666678899999988888888888888775
No 281
>PRK10263 DNA translocase FtsK; Provisional
Probab=69.79 E-value=30 Score=37.19 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=7.1
Q ss_pred hhHHHHHHHHHhh
Q 022608 73 LTPLIGAFVADAY 85 (294)
Q Consensus 73 ~~~~~~G~laDr~ 85 (294)
.+..+|.|++|.+
T Consensus 63 l~GiVGA~LAD~L 75 (1355)
T PRK10263 63 LGGMPGAWLADTL 75 (1355)
T ss_pred ccchHHHHHHHHH
Confidence 4455555666644
No 282
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=67.35 E-value=42 Score=26.91 Aligned_cols=31 Identities=10% Similarity=0.145 Sum_probs=21.0
Q ss_pred hhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 022608 156 VAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVA 192 (294)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~ 192 (294)
+.+++-..+++ +-|.+.||-..-.|++-+.-
T Consensus 116 YGilSaSWD~~------r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 116 YGILSASWDPE------REGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hhhcccccCCC------CCCCcccHHHHHHhHHHHHH
Confidence 33344446665 58999999888888876543
No 283
>PRK11469 hypothetical protein; Provisional
Probab=66.55 E-value=74 Score=26.37 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=44.3
Q ss_pred CcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHH-HHHHHHHhhcchhHHHHHHHHH
Q 022608 20 GMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPL-IGAFVADAYAGRFWTITIASII 98 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~laDr~~Grr~~l~~~~~~ 98 (294)
.++..+.+.+.....+++.- +-.. ..|.+.-.......+.......... ++..+.+++ |||.-++-|.++
T Consensus 104 ~~~~~l~LaiAtSiDAlavG----i~~~----~~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iL 174 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVG----VGLA----FLQVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVL 174 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHH----HHHH----HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 34555555555555544421 1111 1345555555566666555555554 555555655 888888888888
Q ss_pred HHHHHHHH
Q 022608 99 YQIGMICL 106 (294)
Q Consensus 99 ~~i~~i~~ 106 (294)
..+|.-.+
T Consensus 175 I~iGi~il 182 (188)
T PRK11469 175 IGIGVQIL 182 (188)
T ss_pred HHHHHHHH
Confidence 77776544
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=61.61 E-value=1.6e+02 Score=28.62 Aligned_cols=60 Identities=17% Similarity=0.162 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheee
Q 022608 136 ILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQD 201 (294)
Q Consensus 136 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~ 201 (294)
.+++.-++..+..-.....+.++-+.+.++. .-|+.+...|...|+|+-....+.-++.+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~------IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPA------IGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------cchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3344445666766777778888889999888 58999999999999999876665544433
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=60.21 E-value=1.1e+02 Score=26.90 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=45.2
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhcchhHHHH----HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHH
Q 022608 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTIT----IASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYV 139 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laDr~~Grr~~l~----~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (294)
.-.+..+..+|++.-|+.+-.-.-||+-+. .+.++.++..+..+... ..+......+++
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g-----------------~~~~~~~~~f~I 209 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVG-----------------PGNAAGFAFFYI 209 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhC-----------------cchHHHHHHHHH
Confidence 344445555666667777755445555444 22333333333321111 112224555666
Q ss_pred HHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 140 SLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 140 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
.-++.|+..=+.+++..- +...++..+|. +.|..+|+
T Consensus 210 ~~Fl~G~f~WgiQ~ViL~-lPhEyK~~~pk---~ig~~Fg~ 246 (267)
T PF07672_consen 210 FGFLAGFFLWGIQGVILN-LPHEYKGYNPK---KIGIQFGL 246 (267)
T ss_pred HHHHHHHHHHhhhHHHhc-ChhhhcCCCcc---eehhHHHH
Confidence 666776655445554332 33334444322 45655554
No 286
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=60.05 E-value=12 Score=33.09 Aligned_cols=62 Identities=13% Similarity=0.145 Sum_probs=47.2
Q ss_pred HHHHHHHHhHHhhHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHH---------HHhhcchhHHH
Q 022608 29 SNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFV---------ADAYAGRFWTI 92 (294)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Grr~~l 92 (294)
+..+....+.....+++..|+++ .|.++.+.+.+.....+.-.+..++.|.. -||+ |||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 45566666666677888899875 58888888888888888888998888754 4787 998744
No 287
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=56.95 E-value=49 Score=21.15 Aligned_cols=29 Identities=14% Similarity=-0.007 Sum_probs=19.2
Q ss_pred HHHHHHhhhHHHHHHHHHhhcchhHHHHH
Q 022608 66 NFGGTGSLTPLIGAFVADAYAGRFWTITI 94 (294)
Q Consensus 66 ~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 94 (294)
.......+.....|+..|+++|.++..++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~ 36 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTL 36 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 34445556667788889988888554443
No 288
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=55.74 E-value=80 Score=29.76 Aligned_cols=59 Identities=14% Similarity=0.024 Sum_probs=43.6
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchh
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWG 206 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~ 206 (294)
.+.++..-.......++.+.+.|++ .-|+.+++.+...|+|+-.-..+..++.+.+++.
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~------iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPA------IGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcc------cCccHHHHHHHHHHhcCCcHHHHHHHhcccCcee
Confidence 3344444444556677888888888 5899999999999999988777777777765544
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=54.46 E-value=30 Score=34.00 Aligned_cols=93 Identities=12% Similarity=0.062 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeecc----chh--
Q 022608 133 QVAILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNI----GWG-- 206 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~----g~~-- 206 (294)
+...++--.+++|++-........-+.-+++|++ -|+.+.+++.....+|..++..+...+.... +|-
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~s------MkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~~ 530 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPES------MKSVATALWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLGF 530 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCh
Confidence 4455555667889999888888899999999998 6999999999999999999888765443222 231
Q ss_pred ---------hhhhHhHHHHHHHHHHHHHhcccee
Q 022608 207 ---------WGLGIPTFAMFLSIIAFLIGYPLYR 231 (294)
Q Consensus 207 ---------~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
..||+.+....+....+..+.+++.
T Consensus 531 ~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~ 564 (571)
T KOG1237|consen 531 ANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYD 564 (571)
T ss_pred hHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeee
Confidence 2344444455555555555555544
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=51.34 E-value=5.6 Score=35.66 Aligned_cols=55 Identities=9% Similarity=0.170 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 135 AILYVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 135 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
+..++..+++|+..|-..+....+..+..++++ |..+......+..+|-.+|..+
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------------HHHH---------------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 445556678899999999999999998888664 4444444444555555555443
No 291
>COG3619 Predicted membrane protein [Function unknown]
Probab=51.32 E-value=1.6e+02 Score=25.29 Aligned_cols=62 Identities=10% Similarity=0.006 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhh-------cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhh
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQ-------LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAY 85 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~ 85 (294)
+.+.+...+...++|......+.++.+.. +.-++..-........+...++...+..+.-+.
T Consensus 14 ~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~ 82 (226)
T COG3619 14 LLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRA 82 (226)
T ss_pred HHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344555556666544444444444321 111223333344444555555544444444443
No 292
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=49.90 E-value=77 Score=23.42 Aligned_cols=25 Identities=12% Similarity=-0.048 Sum_probs=15.2
Q ss_pred HHHhhhHHHHHHHHHhhcchhHHHH
Q 022608 69 GTGSLTPLIGAFVADAYAGRFWTIT 93 (294)
Q Consensus 69 ~~~~~~~~~~G~laDr~~Grr~~l~ 93 (294)
++..+...+.|...|+.+|-.+...
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHH
Confidence 3444556666777787777655333
No 293
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=49.25 E-value=1.5e+02 Score=24.56 Aligned_cols=41 Identities=10% Similarity=-0.058 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhHHHHHHHHH---hhcchhHHHHHHHHHHHHHHHH
Q 022608 64 LTNFGGTGSLTPLIGAFVAD---AYAGRFWTITIASIIYQIGMIC 105 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laD---r~~Grr~~l~~~~~~~~i~~i~ 105 (294)
.....+...+|..+++.+.+ +. .+++.....+.+..+....
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~-~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRR-RRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHHHHH
Confidence 34445555667777777732 22 3444444444444443333
No 294
>PRK02237 hypothetical protein; Provisional
Probab=48.72 E-value=34 Score=25.63 Aligned_cols=48 Identities=19% Similarity=0.190 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 022608 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICL 106 (294)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~ 106 (294)
++.+-+...+...+.+.+++++|..|+. -.-+-=.+|..++.+|..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHh
Confidence 4588899999999999999999999997 65566667777777776544
No 295
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=48.54 E-value=2.5e+02 Score=28.50 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=30.7
Q ss_pred HHHHH---hhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccC
Q 022608 79 AFVAD---AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGG 150 (294)
Q Consensus 79 G~laD---r~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 150 (294)
+-++| ++-||.+-++++.+++.++.+...+... .++.+..+.++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~---------------------~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG---------------------KPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------CcHHHHHHHHHHHHHHHH
Confidence 44554 4446777777777777766666555431 455566666666655444
No 296
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=48.30 E-value=36 Score=25.40 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 022608 58 TKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLT 107 (294)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~ 107 (294)
...+-....+...+.+.+++.+|..|+. -.-+-=.+|..++.+|..+..
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 6678889999999999999999999997 666666677777777765443
No 297
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=47.46 E-value=3.2e+02 Score=27.74 Aligned_cols=53 Identities=19% Similarity=0.155 Sum_probs=32.2
Q ss_pred HHHHHHH---hhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccC
Q 022608 77 IGAFVAD---AYAGRFWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGG 150 (294)
Q Consensus 77 ~~G~laD---r~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 150 (294)
+++-++| ++-||.+-++++.+++.++.+...+... .++.+..+.++.+++.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~---------------------~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP---------------------KPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------chHHHHHHHHHHHHHHHH
Confidence 3334554 4446778888888777777766665431 455566666666655544
No 298
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=45.60 E-value=1.8e+02 Score=28.50 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhccCcchhhhhhhhcccCCC
Q 022608 134 VAILYVSLLLAALGSGGIRPCVVAFGADQFDET 166 (294)
Q Consensus 134 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 166 (294)
.+.-......+|+|.|...-.+..+.....|+.
T Consensus 325 ~~~g~~~l~al~LGMg~Plllv~~f~~~~LPk~ 357 (569)
T COG4232 325 ALLGGLALYALGLGMGLPLLLIGVFGNRLLPKP 357 (569)
T ss_pred HHHHHHHHHHHHHhcccchhhheecccccCCCC
Confidence 333344445567777776666666666666664
No 299
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.57 E-value=45 Score=24.20 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHHHHHHHHHHHHhccceec
Q 022608 174 TWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRN 232 (294)
Q Consensus 174 rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (294)
...+--+++....+|+++|.+. |+..+.++|. .++..+..++.+++.+.-+|.|++
T Consensus 21 QkkaEr~~q~ilti~aiVg~i~-Gf~~Qqls~t--vy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 21 QKKAERFQQLILTIGAIVGFIY-GFAQQQLSVT--VYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHhcCCCchhhhc
Confidence 3444556777888888888755 4444544543 233333333444454444455544
No 300
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=37.87 E-value=19 Score=27.87 Aligned_cols=10 Identities=20% Similarity=0.205 Sum_probs=4.3
Q ss_pred hhhhHhHHHH
Q 022608 207 WGLGIPTFAM 216 (294)
Q Consensus 207 ~~f~~~~~~~ 216 (294)
|++++.+++.
T Consensus 2 W~l~~iii~~ 11 (130)
T PF12273_consen 2 WVLFAIIIVA 11 (130)
T ss_pred eeeHHHHHHH
Confidence 4444444433
No 301
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=37.72 E-value=90 Score=22.28 Aligned_cols=62 Identities=13% Similarity=-0.003 Sum_probs=30.4
Q ss_pred HHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHhhhheeeccchhhhhhHhHHH
Q 022608 145 ALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTVLVYIQDNIGWGWGLGIPTFA 215 (294)
Q Consensus 145 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig~~~~~~~~~~l~~~~g~~~~f~~~~~~ 215 (294)
|+|-..+.|..|.++.|.--... .-| +......+|-.+|.+....+......+..+....+.
T Consensus 5 GigRFayTplLP~M~~~~~ls~~-----~ag----~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLS-----QAG----WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHH-----HHH----HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 44444566777777777433321 233 333344555555555555554443333334433333
No 302
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=36.01 E-value=49 Score=30.63 Aligned_cols=16 Identities=13% Similarity=0.434 Sum_probs=7.6
Q ss_pred cchhHHHHHHHHHHHH
Q 022608 86 AGRFWTITIASIIYQI 101 (294)
Q Consensus 86 ~Grr~~l~~~~~~~~i 101 (294)
.|+.|.+++-+...+.
T Consensus 200 v~~~r~V~vNl~~~~l 215 (374)
T PF01528_consen 200 VGPFRAVVVNLVLSLL 215 (374)
T ss_pred HhccHHHHHHHHHHHH
Confidence 3455555555444433
No 303
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=36.00 E-value=50 Score=30.08 Aligned_cols=114 Identities=12% Similarity=0.139 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhhhhcC---------CC-----HHHHHHHHHHHHHHHhhhHHHHHHHHHhh-cch
Q 022608 24 MPFIFSNEVCEKLAVVGFNTNMISYLTTQLH---------MP-----LTKAANTLTNFGGTGSLTPLIGAFVADAY-AGR 88 (294)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---------~~-----~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Gr 88 (294)
....++..+|.|++|..+.+---..+.++.+ .+ ....+.+...=.+-..+.-+..-..-||+ +|.
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~ 93 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGF 93 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccch
Confidence 3444567788888876554444444433322 00 01122222222233333334445567776 355
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhc
Q 022608 89 FWTITIASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (294)
Q Consensus 89 r~~l~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 161 (294)
|-.+ ..++.+.++.+.+++. +.++-..+..+..++.|.-+....++-+.
T Consensus 94 Ri~~--~v~~sa~s~~lVafs~----------------------s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 94 RIAL--VVLLSALSFFLVAFSN----------------------SVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred HHHH--HHHHHhcceEEEEecc----------------------chhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 5433 2334455555555544 56777778888889988877665554444
No 304
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=35.41 E-value=2.9e+02 Score=23.69 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=39.6
Q ss_pred hhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 022608 49 LTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPQL 115 (294)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~~~~~~~~ 115 (294)
+.+..+++..+.+........... +....+.+|. +.++....|.+...+|...+..+-.+|++
T Consensus 122 ~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~-~~~~p~~LG~~Mi~~GlyfLl~aliiPn~ 184 (224)
T PF09930_consen 122 LAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRL-KKPYPIILGNFMIFLGLYFLLSALIIPNY 184 (224)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 345678999888887766555554 6677777787 75555566666666666544333334543
No 305
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=35.02 E-value=1.7e+02 Score=24.22 Aligned_cols=22 Identities=5% Similarity=-0.022 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhHHHHHHHHHhh
Q 022608 64 LTNFGGTGSLTPLIGAFVADAY 85 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laDr~ 85 (294)
+..+.++..+...+.|+++||.
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~ 109 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKI 109 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhh
Confidence 3566777788889999999998
No 306
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=33.27 E-value=2.3e+02 Score=22.48 Aligned_cols=39 Identities=13% Similarity=-0.122 Sum_probs=22.7
Q ss_pred cCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHH
Q 022608 53 LHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTI 92 (294)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l 92 (294)
.|++....-.-..+.++.-.++-+++.+++|+. +.-..+
T Consensus 67 iGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L-~~~e~~ 105 (150)
T COG3086 67 LGIEEKSLLKSALLVYIFPLVGLFLGAILAQYL-FFSELI 105 (150)
T ss_pred EccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHH
Confidence 455544444444455556666667777888887 554433
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=32.13 E-value=4.3e+02 Score=24.73 Aligned_cols=88 Identities=9% Similarity=0.019 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhcchhHHHHH--HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHHHHHH
Q 022608 64 LTNFGGTGSLTPLIGAFVADAYAGRFWTITI--ASIIYQIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAILYVSL 141 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (294)
=.+..+.+.++.++.|.+.-.+ .|..-+++ +.+...-..+++.- ..+.|..+++.
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~----------------------t~~Iw~~Ya~y 333 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ----------------------TQHIWVCYAGY 333 (433)
T ss_pred HHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc----------------------ccceehhhhhH
Confidence 3445556667777888886554 45433333 22222222222222 22677778877
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
++...-.....+....-+++....+ +-|..+|+
T Consensus 334 vlfr~~y~l~itiA~~~iA~nL~~e------~~gLvFGi 366 (433)
T KOG3810|consen 334 VLFRVIYQLTITIATFQIARNLSSE------LFGLVFGI 366 (433)
T ss_pred HHHHhhHhhhhhHHHHHHHHhhhhh------hheeeeeh
Confidence 7777777777777767777766665 46666665
No 308
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=31.49 E-value=3.3e+02 Score=24.64 Aligned_cols=74 Identities=14% Similarity=0.199 Sum_probs=51.7
Q ss_pred HHHhHHhhHHHHHHHhhhhcCCC-HHHHH----HHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 022608 34 EKLAVVGFNTNMISYLTTQLHMP-LTKAA----NTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTI 108 (294)
Q Consensus 34 ~~~~~~~~~~~l~~yl~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i~~i~~~~ 108 (294)
..++.-++-+++.++..+++.-+ ..+.. +.....+++..++..+.+++.|++ |-.....+..+.+.++.+....
T Consensus 43 ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 43 IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHh
Confidence 44555567788889988877654 33333 455666667777777888999998 8888888887777777665554
No 309
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=30.51 E-value=2.2e+02 Score=21.28 Aligned_cols=35 Identities=11% Similarity=-0.032 Sum_probs=22.0
Q ss_pred CCcchHHHHHHHHHHHHHhHHhhHHHHHHHhhhhc
Q 022608 19 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQL 53 (294)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~ 53 (294)
.++.-++........+.++|-....++.+++.+.+
T Consensus 46 ~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 46 SGYHFILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555666666666776666777777776543
No 310
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=30.05 E-value=2.6e+02 Score=22.87 Aligned_cols=25 Identities=12% Similarity=0.009 Sum_probs=11.5
Q ss_pred HhhhHHHHHHHHHhhcchhHHHHHH
Q 022608 71 GSLTPLIGAFVADAYAGRFWTITIA 95 (294)
Q Consensus 71 ~~~~~~~~G~laDr~~Grr~~l~~~ 95 (294)
..+.+++++.+.--+++|.+.+..|
T Consensus 77 ~gv~Si~aAllY~~~l~k~~g~W~G 101 (173)
T PF11085_consen 77 IGVFSIVAALLYYALLKKFKGPWPG 101 (173)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchH
Confidence 3344555555554444444443333
No 311
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=29.04 E-value=3.6e+02 Score=23.65 Aligned_cols=18 Identities=22% Similarity=0.060 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHhccC
Q 022608 133 QVAILYVSLLLAALGSGG 150 (294)
Q Consensus 133 ~~~~~~~~~~l~g~g~g~ 150 (294)
..+.+.+..++.+|+.++
T Consensus 22 ~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 22 YPWLLILVLALLTFFFGM 39 (284)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 345555555555554443
No 312
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=27.45 E-value=5.8e+02 Score=24.78 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=53.9
Q ss_pred HHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHHHHHHHHHH-HHHHHHhhhheeeccchhhhhhHhHHHHHHH
Q 022608 141 LLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAA-ILVAVTVLVYIQDNIGWGWGLGIPTFAMFLS 219 (294)
Q Consensus 141 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ig-~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 219 (294)
.+..|++.-..++.--.=+.+.+|.+. .++..++-++...++- ..+....++.+....||-..-.++.+++++.
T Consensus 291 vl~Y~v~inLvE~~wKs~ik~~~~~~~-----~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 291 VLAYGVSINLVEGVWKSGIKELYPTTN-----EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCChh-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344466666677776677788888875 5777787776666665 3344455677888889988777777776666
Q ss_pred HHHHH
Q 022608 220 IIAFL 224 (294)
Q Consensus 220 ~~~~~ 224 (294)
.++++
T Consensus 366 g~lFF 370 (509)
T COG3202 366 GVLFF 370 (509)
T ss_pred HHHHH
Confidence 54443
No 313
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=25.83 E-value=5.7e+02 Score=24.13 Aligned_cols=92 Identities=9% Similarity=0.074 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHH--HHHHHHHHHHhhcCCCCCCCCCCccccccccchhHHHH
Q 022608 60 AANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIY--QIGMICLTISAILPQLRPPPCEGEQVCQEANKGQVAIL 137 (294)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~--~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
-|.+-.+..+.+.++.+..|++..++ .+..-+.++..-. ....+++.... +.+..
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~t~----------------------~Iwv~ 343 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSFTG----------------------NIWVC 343 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHHhh----------------------HHHHH
Confidence 35566677777788888888886554 5544444333222 22233333333 77887
Q ss_pred HHHHHHHHHhccCcchhhhhhhhcccCCCChhhhhhhhhHHHH
Q 022608 138 YVSLLLAALGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNW 180 (294)
Q Consensus 138 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~rg~~~~~ 180 (294)
+++.++.+...-...+....-++.....+ +.|..+|+
T Consensus 344 Y~~yIif~~~y~fliTiA~~qIA~~l~~e------~yaLVFGi 380 (412)
T PF01770_consen 344 YAGYIIFRSLYMFLITIASFQIAKNLSEE------RYALVFGI 380 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc------ceeeeeee
Confidence 77777776655555555555555555544 46666665
No 314
>COG5547 Small integral membrane protein [Function unknown]
Probab=25.20 E-value=2.1e+02 Score=18.84 Aligned_cols=15 Identities=33% Similarity=0.368 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHhccC
Q 022608 136 ILYVSLLLAALGSGG 150 (294)
Q Consensus 136 ~~~~~~~l~g~g~g~ 150 (294)
.+.+..++.|++.|.
T Consensus 33 ilviil~~lGv~iGl 47 (62)
T COG5547 33 ILVIILILLGVYIGL 47 (62)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444455555543
No 315
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.55 E-value=2.5e+02 Score=19.49 Aligned_cols=26 Identities=8% Similarity=0.233 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhh
Q 022608 60 AANTLTNFGGTGSLTPLIGAFVADAY 85 (294)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~G~laDr~ 85 (294)
+..+.........+.+++.|++.+.+
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666677778888899999887
No 316
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=24.07 E-value=98 Score=22.23 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhccceeccCCCC
Q 022608 214 FAMFLSIIAFLIGYPLYRNLDPAG 237 (294)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~ 237 (294)
++..+.+..+.++..+.+.++|-.
T Consensus 43 iFil~VilwfvCC~kRkrsRrPIY 66 (94)
T PF05393_consen 43 IFILLVILWFVCCKKRKRSRRPIY 66 (94)
T ss_pred HHHHHHHHHHHHHHHhhhccCCcc
Confidence 334444445555555555455443
No 317
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=23.77 E-value=5.8e+02 Score=23.52 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=37.9
Q ss_pred HHHHHhccCcchhhhhhhhcccCCCChhh-hhhhhhHHHHHHHHHHHHHHHHHHh
Q 022608 142 LLAALGSGGIRPCVVAFGADQFDETDPKQ-ATKTWKYFNWYYFVMGAAILVAVTV 195 (294)
Q Consensus 142 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~ig~~~~~~~ 195 (294)
.+.|+.....+.....++-.+.|.-++++ ..-.|..++.+..+..+|+.+-+.+
T Consensus 247 l~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l 301 (354)
T PF05631_consen 247 LLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRL 301 (354)
T ss_pred HHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 35577778888888888888888765432 1236777877777777777766543
No 318
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=23.37 E-value=1.9e+02 Score=22.96 Aligned_cols=25 Identities=20% Similarity=0.088 Sum_probs=19.1
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhcchh
Q 022608 64 LTNFGGTGSLTPLIGAFVADAYAGRF 89 (294)
Q Consensus 64 ~~~~~~~~~~~~~~~G~laDr~~Grr 89 (294)
+..+.++..+.+.+.|++.+|. .++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~-~~~ 83 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERL-KRS 83 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhc-ccc
Confidence 4556677778888899999997 654
No 319
>PHA03242 envelope glycoprotein M; Provisional
Probab=23.37 E-value=6.4e+02 Score=23.90 Aligned_cols=19 Identities=5% Similarity=0.127 Sum_probs=9.2
Q ss_pred HHHhhcchhHHHHHHHHHH
Q 022608 81 VADAYAGRFWTITIASIIY 99 (294)
Q Consensus 81 laDr~~Grr~~l~~~~~~~ 99 (294)
.-+|+.|.-|.+++-+...
T Consensus 209 ~l~rlvg~~RaV~~Nl~~~ 227 (428)
T PHA03242 209 THHRVVGPVRAVMTNALLG 227 (428)
T ss_pred chHHHhccchHHHHHHHHH
Confidence 4445556645554444333
No 320
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=22.06 E-value=3.3e+02 Score=21.75 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=22.8
Q ss_pred hheeeccchhhhhhHhHHHHHHHHHHHHHhccceeccC
Q 022608 197 VYIQDNIGWGWGLGIPTFAMFLSIIAFLIGYPLYRNLD 234 (294)
Q Consensus 197 ~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
.+-...+||.+...+...+.+.+.++++=..|+|+-++
T Consensus 53 m~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~YrfED 90 (155)
T PF10777_consen 53 MYYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYRFED 90 (155)
T ss_pred HHhcchhhhHHHHHHHHHHHHHHHHHHhhccceeeecc
Confidence 34455667776666555555555555555667776554
No 321
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=21.69 E-value=7.6e+02 Score=24.19 Aligned_cols=66 Identities=14% Similarity=0.041 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHhhhH--HHHHHHHHhh----cchhHHHHHH
Q 022608 26 FIFSNEVCEKLAVVGFNTNMISYLTT-QLHMPLTKAANTLTNFGGTGSLTP--LIGAFVADAY----AGRFWTITIA 95 (294)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~laDr~----~Grr~~l~~~ 95 (294)
.+++.-+.+++-.--.....|..+++ ..+.+-++.+ ++.+.....+ ++++++-|.+ +||||.-++=
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~----~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQA----IFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHhe----eeeeeechhHHHHhhhhhhhhhcccccCCcchhhhH
Confidence 34445555544432222445555554 1466666654 3333334333 4677776633 5999977654
No 322
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=20.28 E-value=2.7e+02 Score=18.35 Aligned_cols=41 Identities=17% Similarity=0.047 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHh-hhHHHHHHHHHhhcchhHHHHHHHHHH
Q 022608 58 TKAANTLTNFGGTGS-LTPLIGAFVADAYAGRFWTITIASIIY 99 (294)
Q Consensus 58 ~~~~~~~~~~~~~~~-~~~~~~G~laDr~~Grr~~l~~~~~~~ 99 (294)
............... ++..++..+.+++ +++--.+.+.++.
T Consensus 23 ~~~~~~ig~~~~~~~~~G~~~G~~~~~~~-~~~~~~igg~iLi 64 (67)
T PF02659_consen 23 LLIALIIGIFQFIMPLLGLLLGRRLGRFI-GSYAEWIGGIILI 64 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333444444444333 3334444555544 6664444444443
No 323
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=20.03 E-value=7.3e+02 Score=23.29 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=58.2
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcchhHHHHHHHHHHHH----HHHHH-HHHhhcCCCCC
Q 022608 43 TNMISYLTTQLHMPLTKAANTLTNFGGTGSLTPLIGAFVADAYAGRFWTITIASIIYQI----GMICL-TISAILPQLRP 117 (294)
Q Consensus 43 ~~l~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~i----~~i~~-~~~~~~~~~~~ 117 (294)
..+..|+ +|-...+.+.+++.+...+.+|+.+.-++.|.- -.-+.+..=.++..+ ..++. .++. .
T Consensus 31 ~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~-~----- 100 (508)
T COG4262 31 GTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFAL-E----- 100 (508)
T ss_pred HHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHh-c-----
Confidence 3355555 466667788889999999999888887776643 222222222222222 11222 1222 1
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHHhccCcchhhhhhhhc
Q 022608 118 PPCEGEQVCQEANKGQVAILYVSLLLAALGSGGIRPCVVAFGAD 161 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 161 (294)
.....+++++...++|.-+|.-.|....+...
T Consensus 101 ------------~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 101 ------------SAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred ------------cchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 01156777888888899899888887777655
Done!