Query 022611
Match_columns 294
No_of_seqs 174 out of 624
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:17:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022611.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022611hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yua_A Williams-beuren syndrom 99.3 4.1E-12 1.4E-16 100.4 8.1 64 69-132 7-78 (99)
2 1wjz_A 1700030A21RIK protein; 99.3 2.4E-12 8.3E-17 99.9 4.4 56 75-130 12-81 (94)
3 2cug_A Mkiaa0962 protein; DNAJ 99.3 1.8E-11 6.2E-16 94.6 8.8 58 75-132 13-77 (88)
4 2ys8_A RAB-related GTP-binding 99.2 4.2E-12 1.4E-16 99.0 4.9 54 77-130 25-85 (90)
5 2dn9_A DNAJ homolog subfamily 99.2 1.6E-11 5.6E-16 92.5 7.8 58 75-132 3-68 (79)
6 2guz_A Mitochondrial import in 99.2 4.3E-12 1.5E-16 95.1 4.3 55 75-129 10-69 (71)
7 2ctr_A DNAJ homolog subfamily 99.2 2E-11 6.8E-16 94.4 7.1 56 76-131 4-66 (88)
8 2ctp_A DNAJ homolog subfamily 99.2 2E-11 6.8E-16 92.0 6.6 57 75-131 3-66 (78)
9 2ctw_A DNAJ homolog subfamily 99.2 5.8E-11 2E-15 95.5 8.6 59 74-132 12-78 (109)
10 1hdj_A Human HSP40, HDJ-1; mol 99.2 2.7E-11 9.2E-16 91.1 6.1 55 78-132 2-63 (77)
11 2och_A Hypothetical protein DN 99.2 4.2E-11 1.4E-15 89.3 7.0 55 77-131 6-65 (73)
12 2o37_A Protein SIS1; HSP40, J- 99.2 3.8E-11 1.3E-15 93.7 6.5 56 76-131 5-65 (92)
13 2ctq_A DNAJ homolog subfamily 99.1 1.6E-10 5.4E-15 93.3 9.3 57 75-131 16-80 (112)
14 2dmx_A DNAJ homolog subfamily 99.1 1E-10 3.4E-15 90.9 6.5 55 78-132 8-71 (92)
15 2ej7_A HCG3 gene; HCG3 protein 99.1 6.8E-11 2.3E-15 89.7 5.4 54 77-130 7-69 (82)
16 1iur_A KIAA0730 protein; DNAJ 99.1 5.5E-11 1.9E-15 93.2 4.1 58 71-128 8-74 (88)
17 1faf_A Large T antigen; J doma 99.1 1.7E-10 5.8E-15 88.2 6.7 57 76-132 8-70 (79)
18 2lgw_A DNAJ homolog subfamily 99.0 3.8E-10 1.3E-14 89.7 7.2 53 79-131 2-63 (99)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.0 3E-10 1E-14 90.8 6.1 56 76-131 12-79 (109)
20 1bq0_A DNAJ, HSP40; chaperone, 99.0 1.1E-10 3.7E-15 92.7 1.1 55 78-132 2-64 (103)
21 2l6l_A DNAJ homolog subfamily 98.9 4.6E-10 1.6E-14 94.7 4.6 56 75-130 6-75 (155)
22 3apq_A DNAJ homolog subfamily 98.9 1.3E-09 4.3E-14 93.5 5.5 54 79-132 2-63 (210)
23 2guz_B Mitochondrial import in 98.9 3.4E-09 1.2E-13 79.2 6.2 55 76-131 1-62 (65)
24 3lz8_A Putative chaperone DNAJ 98.8 3.2E-10 1.1E-14 107.3 0.0 56 75-130 24-86 (329)
25 1gh6_A Large T antigen; tumor 98.8 5.8E-10 2E-14 91.2 1.5 57 77-133 6-68 (114)
26 2qwo_B Putative tyrosine-prote 98.8 2.2E-09 7.5E-14 85.2 3.0 48 79-126 33-91 (92)
27 2pf4_E Small T antigen; PP2A, 98.7 4.3E-09 1.5E-13 92.2 3.2 57 76-132 8-70 (174)
28 3hho_A CO-chaperone protein HS 98.6 3E-08 1E-12 85.9 5.9 54 78-131 3-71 (174)
29 1n4c_A Auxilin; four helix bun 98.6 1.6E-08 5.6E-13 89.1 2.7 51 79-129 117-178 (182)
30 1fpo_A HSC20, chaperone protei 98.6 6.1E-08 2.1E-12 83.8 6.0 51 80-130 2-67 (171)
31 3ag7_A Putative uncharacterize 98.5 2.9E-08 1E-12 80.0 2.9 48 78-126 40-102 (106)
32 3bvo_A CO-chaperone protein HS 98.4 2.1E-07 7.3E-12 82.9 6.1 54 78-131 42-110 (207)
33 3apo_A DNAJ homolog subfamily 98.4 7.2E-08 2.4E-12 97.5 2.0 58 75-132 17-82 (780)
34 3uo3_A J-type CO-chaperone JAC 98.1 1.3E-06 4.5E-11 76.3 4.2 55 77-131 9-75 (181)
35 2y4t_A DNAJ homolog subfamily 96.0 0.0022 7.6E-08 57.3 2.1 51 79-129 382-443 (450)
36 2pzi_A Probable serine/threoni 81.0 0.64 2.2E-05 46.2 2.3 43 80-122 630-674 (681)
37 2gqb_A Conserved hypothetical 54.3 21 0.00072 29.8 5.4 60 74-141 66-127 (130)
38 2dpo_A L-gulonate 3-dehydrogen 36.6 1E+02 0.0035 28.1 7.8 57 79-135 260-316 (319)
39 4gic_A HDH, histidinol dehydro 32.2 45 0.0016 32.7 4.8 38 91-136 74-111 (423)
40 4g1u_A Hemin transport system 32.2 1.2E+02 0.0043 28.5 7.7 39 218-258 149-187 (357)
41 1kae_A HDH, histidinol dehydro 30.8 50 0.0017 32.5 4.8 39 90-136 67-105 (434)
42 3qe7_A Uracil permease; uracil 26.6 1.4E+02 0.005 28.5 7.2 44 212-256 155-198 (429)
43 4dnd_A Syntaxin-10, SYN10; str 24.8 51 0.0018 27.0 3.2 30 69-105 14-45 (130)
44 2nq2_A Hypothetical ABC transp 23.0 3E+02 0.01 25.4 8.5 41 216-257 125-165 (337)
45 3vem_A Helicase protein MOM1; 20.3 89 0.003 25.5 3.6 16 113-128 91-106 (115)
No 1
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=4.1e-12 Score=100.35 Aligned_cols=64 Identities=23% Similarity=0.243 Sum_probs=55.7
Q ss_pred CCCCCCCCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 69 DDSAPFEMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 69 ~~~~pf~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
.++....|+..|+|++|||+++|+.+||++||++|..+||+|. +.+.+|+.||++|.....|+.
T Consensus 7 ~~~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 78 (99)
T 2yua_A 7 GSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRK 78 (99)
T ss_dssp CCCCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred CCCCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 3344457889999999999999999999999999999999873 588999999999998876654
No 2
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.27 E-value=2.4e-12 Score=99.89 Aligned_cols=56 Identities=11% Similarity=0.259 Sum_probs=50.5
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------------HHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------------EAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------------~~~~~IEaAYD~Ilm~~L~ 130 (294)
.|...|+|++|||+++|+.+||++||++|..+||+|. +.+.+|+.||+.|.....|
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R 81 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETK 81 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHH
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHH
Confidence 5788999999999999999999999999999999986 5788999999999765443
No 3
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=1.8e-11 Score=94.62 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=51.5
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ-------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
.....|+|++|||+++|+.+||++||+++..+||+|. +.+.+|+.||+.|.....|..
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 77 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4457799999999999999999999999999999984 689999999999998765543
No 4
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=4.2e-12 Score=99.02 Aligned_cols=54 Identities=26% Similarity=0.300 Sum_probs=48.5
Q ss_pred CccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHH
Q 022611 77 SVENALKLLGVSETASFDEILRAKNSIVANCKDDQ-------EAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 77 ~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~ 130 (294)
...|+|++|||+++|+.+||++||++|..+||+|. +++.+|+.||+.|....-|
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R 85 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKS 85 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccc
Confidence 45799999999999999999999999999999984 6899999999999876533
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=1.6e-11 Score=92.53 Aligned_cols=58 Identities=26% Similarity=0.339 Sum_probs=51.3
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDD--------QEAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D--------~~~~~~IEaAYD~Ilm~~L~~R 132 (294)
.++..|+|++|||+++|+.+||++||+++..+||+| ++.+.+|+.||+.|.....|..
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 68 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 456789999999999999999999999999999998 3689999999999988765543
No 6
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.24 E-value=4.3e-12 Score=95.09 Aligned_cols=55 Identities=22% Similarity=0.329 Sum_probs=50.5
Q ss_pred CCCccchhhhhCCCC-CCCHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSE-TASFDEILRAKNSIVANCKDD----QEAIAQVEAAYDMLLMRSL 129 (294)
Q Consensus 75 ~m~~~dpYevLGVs~-~AS~eEIq~Ar~~l~~~y~~D----~~~~~~IEaAYD~Ilm~~L 129 (294)
.|+.+|+|++|||++ +||.+||++||++|..+||+| ++.+.+|+.|||.|....+
T Consensus 10 ~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhh
Confidence 689999999999999 799999999999999999975 6899999999999987644
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=2e-11 Score=94.41 Aligned_cols=56 Identities=21% Similarity=0.283 Sum_probs=49.8
Q ss_pred CCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSETASFDEILRAKNSIVANCKDD-------QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 76 m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D-------~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
++..|+|++|||+++|+.+||++||++|..+||+| ++.+.+|+.||+.|.....|+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 66 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRK 66 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHH
Confidence 45679999999999999999999999999999998 468899999999998765444
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2e-11 Score=92.01 Aligned_cols=57 Identities=25% Similarity=0.310 Sum_probs=50.6
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ-------EAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~ 131 (294)
.++..|+|++|||+++|+.+||++||+++..+||+|. +.+.+|+.||+.|.....|.
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 3567899999999999999999999999999999984 68899999999998765544
No 9
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.18 E-value=5.8e-11 Score=95.50 Aligned_cols=59 Identities=17% Similarity=0.277 Sum_probs=52.1
Q ss_pred CCCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 74 FEMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 74 f~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
..++..|+|++|||+++|+.+||++||++|..+||+|. +.+.+|+.||+.|.....|+.
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~ 78 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 45677899999999999999999999999999999873 578899999999988766554
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.18 E-value=2.7e-11 Score=91.07 Aligned_cols=55 Identities=25% Similarity=0.287 Sum_probs=49.0
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSETASFDEILRAKNSIVANCKDDQ-------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 78 ~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
..|+|++|||+++||.+||++||+++..+||+|. +.+.+|+.||+.|.....|..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 63 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4699999999999999999999999999999983 689999999999987655543
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.18 E-value=4.2e-11 Score=89.32 Aligned_cols=55 Identities=25% Similarity=0.317 Sum_probs=49.2
Q ss_pred CccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHHHHHHHHHH
Q 022611 77 SVENALKLLGVSETASFDEILRAKNSIVANCKDD-----QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 77 ~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D-----~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
...|+|++|||+++|+.+||++||+++..+||+| .+.+.+|+.||+.|.....|+
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQ 65 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHH
Confidence 4579999999999999999999999999999987 478999999999998765543
No 12
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.17 E-value=3.8e-11 Score=93.66 Aligned_cols=56 Identities=20% Similarity=0.289 Sum_probs=49.9
Q ss_pred CCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSETASFDEILRAKNSIVANCKDD-----QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 76 m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D-----~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
+...|+|++|||+++|+.+||++||++|..+||+| ++++.+|+.||+.|.....|+
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKRE 65 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHH
Confidence 35689999999999999999999999999999986 478999999999998765544
No 13
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=1.6e-10 Score=93.26 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=50.8
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDD--------QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D--------~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
.+...|+|++|||+++|+.+||++||++|..+||+| .+.+.+|+.||+.|.....|+
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~ 80 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 456789999999999999999999999999999987 368899999999998776544
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=1e-10 Score=90.85 Aligned_cols=55 Identities=24% Similarity=0.322 Sum_probs=49.0
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH---------HHHHHHHHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSETASFDEILRAKNSIVANCKDDQ---------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 78 ~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
..|+|++|||+++|+.+||++||++|..+||+|. +.+.+|+.||+.|.....|+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 71 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4699999999999999999999999999999973 578899999999988765543
No 15
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=6.8e-11 Score=89.72 Aligned_cols=54 Identities=22% Similarity=0.285 Sum_probs=47.6
Q ss_pred CccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH---------HHHHHHHHHHHHHHHHHHH
Q 022611 77 SVENALKLLGVSETASFDEILRAKNSIVANCKDDQ---------EAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 77 ~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~ 130 (294)
...|+|++|||+++|+.+||++||+++..+||+|. +.+.+|+.||+.|.....|
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R 69 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHH
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 35799999999999999999999999999999983 4788999999999865443
No 16
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.09 E-value=5.5e-11 Score=93.17 Aligned_cols=58 Identities=9% Similarity=0.064 Sum_probs=51.3
Q ss_pred CCCCCCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC---------HHHHHHHHHHHHHHHHHH
Q 022611 71 SAPFEMSVENALKLLGVSETASFDEILRAKNSIVANCKDD---------QEAIAQVEAAYDMLLMRS 128 (294)
Q Consensus 71 ~~pf~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D---------~~~~~~IEaAYD~Ilm~~ 128 (294)
..|-.++.+|.|++|||+++||.+||++||++|..+||+| ++++.+|+.||+.|....
T Consensus 8 ~~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~ 74 (88)
T 1iur_A 8 LVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp CCCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 3455678899999999999999999999999999999987 268899999999998653
No 17
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.08 E-value=1.7e-10 Score=88.20 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCccchhhhhCCCCC--CCHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSET--ASFDEILRAKNSIVANCKDD----QEAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 76 m~~~dpYevLGVs~~--AS~eEIq~Ar~~l~~~y~~D----~~~~~~IEaAYD~Ilm~~L~~R 132 (294)
.+.+++|++|||+++ +|.+||++||++|..+||+| .+++.+|+.||+.|...-.+.|
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH
Confidence 345789999999999 99999999999999999976 5899999999999987655544
No 18
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.04 E-value=3.8e-10 Score=89.65 Aligned_cols=53 Identities=23% Similarity=0.326 Sum_probs=47.7
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH---------HHHHHHHHHHHHHHHHHHHH
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDDQ---------EAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~---------~~~~~IEaAYD~Ilm~~L~~ 131 (294)
.|+|++|||+++||.+||++||+++..+||+|. +.+.+|+.||+.|.....|+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~ 63 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 589999999999999999999999999999973 57889999999998775544
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.02 E-value=3e-10 Score=90.85 Aligned_cols=56 Identities=18% Similarity=0.289 Sum_probs=50.0
Q ss_pred CCccchhhhhCCCCCC-CHHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSETA-SFDEILRAKNSIVANCKDD-----------QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 76 m~~~dpYevLGVs~~A-S~eEIq~Ar~~l~~~y~~D-----------~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
....|+|++|||+++| |.+||++||+++..+||+| .+.+.+|+.||+.|.....|+
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~ 79 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT 79 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4568999999999999 9999999999999999998 257889999999998876554
No 20
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=98.96 E-value=1.1e-10 Score=92.70 Aligned_cols=55 Identities=24% Similarity=0.348 Sum_probs=48.6
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 78 ~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
..|+|++|||+++||.+||++||++|..+||+|. +++.+|+.||+.|.....|+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 64 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4799999999999999999999999999999873 578899999999987655443
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=98.94 E-value=4.6e-10 Score=94.71 Aligned_cols=56 Identities=13% Similarity=0.304 Sum_probs=50.0
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------------HHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------------EAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------------~~~~~IEaAYD~Ilm~~L~ 130 (294)
.|...|+|++|||+++|+.+||++||++|..+||+|. +.+.+|+.||+.|.....|
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R 75 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETK 75 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4677899999999999999999999999999999873 6788999999999876554
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.89 E-value=1.3e-09 Score=93.51 Aligned_cols=54 Identities=31% Similarity=0.425 Sum_probs=48.6
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
+|+|++|||+++||.+||++||+++..+||+|. +++.+|++||+.|.....|+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~ 63 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 699999999999999999999999999999874 578899999999988766553
No 23
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.86 E-value=3.4e-09 Score=79.19 Aligned_cols=55 Identities=22% Similarity=0.261 Sum_probs=49.1
Q ss_pred CCccchhhhhCCCCC---CCHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSET---ASFDEILRAKNSIVANCKDD----QEAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 76 m~~~dpYevLGVs~~---AS~eEIq~Ar~~l~~~y~~D----~~~~~~IEaAYD~Ilm~~L~~ 131 (294)
|+.+++|++|||+++ ++.+||+++|++|+.++|+| .....+|+.|+|.|..+ ++.
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~-~~~ 62 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE-LAQ 62 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH-HHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH-HHh
Confidence 788999999999999 99999999999999999965 57899999999998764 443
No 24
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.84 E-value=3.2e-10 Score=107.28 Aligned_cols=56 Identities=18% Similarity=0.302 Sum_probs=0.0
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDD-------QEAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D-------~~~~~~IEaAYD~Ilm~~L~ 130 (294)
.|+.+|+|++|||+++||.+||++||++|..+||+| ++++++|++|||.|.....|
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R 86 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRR 86 (329)
T ss_dssp ---------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhh
Confidence 588899999999999999999999999999999998 35788999999999876443
No 25
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=98.84 E-value=5.8e-10 Score=91.23 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=51.0
Q ss_pred CccchhhhhCCCCCCCH--HHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHHHHHHh
Q 022611 77 SVENALKLLGVSETASF--DEILRAKNSIVANCKDD----QEAIAQVEAAYDMLLMRSLTQRR 133 (294)
Q Consensus 77 ~~~dpYevLGVs~~AS~--eEIq~Ar~~l~~~y~~D----~~~~~~IEaAYD~Ilm~~L~~Rq 133 (294)
...|+|++|||+++|+. +||++||++|..+||+| ++++.+|+.||+.|.....|++.
T Consensus 6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~ 68 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQ 68 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCS
T ss_pred hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHh
Confidence 45799999999999999 99999999999999987 46899999999999888766653
No 26
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=98.78 E-value=2.2e-09 Score=85.18 Aligned_cols=48 Identities=10% Similarity=0.153 Sum_probs=43.1
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-----------HHHHHHHHHHHHHHH
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDDQ-----------EAIAQVEAAYDMLLM 126 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-----------~~~~~IEaAYD~Ilm 126 (294)
++.|++|||+++||.+||++||+++..+||+|. +++.+|+.|||.|..
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 467999999999999999999999999999873 368899999999863
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=98.72 E-value=4.3e-09 Score=92.17 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=49.8
Q ss_pred CCccchhhhhCCCCCCC--HHHHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHHH
Q 022611 76 MSVENALKLLGVSETAS--FDEILRAKNSIVANCKDDQ----EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 76 m~~~dpYevLGVs~~AS--~eEIq~Ar~~l~~~y~~D~----~~~~~IEaAYD~Ilm~~L~~R 132 (294)
++..|+|++|||+++|+ .+||++||+++..+||+|. +++.+|++||+.|.....|++
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~ 70 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 70 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHT
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 34579999999999999 6999999999999999985 678999999999998766554
No 28
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.64 E-value=3e-08 Score=85.94 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=47.3
Q ss_pred ccchhhhhCCCCCCC--HHHHHHHHHHHHHHcCCCH-------------HHHHHHHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSETAS--FDEILRAKNSIVANCKDDQ-------------EAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 78 ~~dpYevLGVs~~AS--~eEIq~Ar~~l~~~y~~D~-------------~~~~~IEaAYD~Ilm~~L~~ 131 (294)
..|+|++|||+++++ .+||++||+++..+||||. +.+.+|+.||+.|.....|.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 71 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRA 71 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 469999999999998 9999999999999999984 46789999999998765544
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.58 E-value=1.6e-08 Score=89.10 Aligned_cols=51 Identities=12% Similarity=0.197 Sum_probs=46.3
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH-----------HHHHHHHHHHHHHHHHHH
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDDQ-----------EAIAQVEAAYDMLLMRSL 129 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~-----------~~~~~IEaAYD~Ilm~~L 129 (294)
.|+|++|||+++|+.+||++||+++..+||+|. +.+.+|+.||+.|.....
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~k 178 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQ 178 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHh
Confidence 699999999999999999999999999999874 478899999999987654
No 30
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.57 E-value=6.1e-08 Score=83.82 Aligned_cols=51 Identities=12% Similarity=0.193 Sum_probs=46.0
Q ss_pred chhhhhCCCCCC--CHHHHHHHHHHHHHHcCCCH-------------HHHHHHHHHHHHHHHHHHH
Q 022611 80 NALKLLGVSETA--SFDEILRAKNSIVANCKDDQ-------------EAIAQVEAAYDMLLMRSLT 130 (294)
Q Consensus 80 dpYevLGVs~~A--S~eEIq~Ar~~l~~~y~~D~-------------~~~~~IEaAYD~Ilm~~L~ 130 (294)
|+|++|||++++ |.+||++||++|..+||||. +.+.+|+.||+.|.....|
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R 67 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMR 67 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 899999999999 99999999999999999984 3688999999999875544
No 31
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.54 E-value=2.9e-08 Score=80.04 Aligned_cols=48 Identities=6% Similarity=0.001 Sum_probs=42.1
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH---------------HHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSETASFDEILRAKNSIVANCKDDQ---------------EAIAQVEAAYDMLLM 126 (294)
Q Consensus 78 ~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~---------------~~~~~IEaAYD~Ilm 126 (294)
..|+|++||++. ||.+|||+||+++..+||+|. +++.+|+.||+.|..
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd 102 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcC
Confidence 368999999996 999999999999999999874 467899999999853
No 32
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.44 E-value=2.1e-07 Score=82.90 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=46.2
Q ss_pred ccchhhhhCCCCC--CCHHHHHHHHHHHHHHcCCCH-------------HHHHHHHHHHHHHHHHHHHH
Q 022611 78 VENALKLLGVSET--ASFDEILRAKNSIVANCKDDQ-------------EAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 78 ~~dpYevLGVs~~--AS~eEIq~Ar~~l~~~y~~D~-------------~~~~~IEaAYD~Ilm~~L~~ 131 (294)
..|+|++|||+++ ++.+||++||++|..+||||. +++.+|+.||+.|.....|.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 3589999999997 799999999999999999874 24579999999998765553
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.39 E-value=7.2e-08 Score=97.50 Aligned_cols=58 Identities=29% Similarity=0.363 Sum_probs=34.4
Q ss_pred CCCccchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCH--------HHHHHHHHHHHHHHHHHHHHH
Q 022611 75 EMSVENALKLLGVSETASFDEILRAKNSIVANCKDDQ--------EAIAQVEAAYDMLLMRSLTQR 132 (294)
Q Consensus 75 ~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~--------~~~~~IEaAYD~Ilm~~L~~R 132 (294)
.....|+|++|||+++||.+||++||++|..+||+|. +++.+|+.||+.|.....|+.
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~ 82 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 82 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHH
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHH
Confidence 3456899999999999999999999999999999985 367899999999998776654
No 34
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.14 E-value=1.3e-06 Score=76.34 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=47.0
Q ss_pred Cccchhhhh------CCCC-CCCHHHHHHHHHHHHHHcCCCH-----HHHHHHHHHHHHHHHHHHHH
Q 022611 77 SVENALKLL------GVSE-TASFDEILRAKNSIVANCKDDQ-----EAIAQVEAAYDMLLMRSLTQ 131 (294)
Q Consensus 77 ~~~dpYevL------GVs~-~AS~eEIq~Ar~~l~~~y~~D~-----~~~~~IEaAYD~Ilm~~L~~ 131 (294)
...|+|++| |+.+ +||.+||++||++|..+||+|. +.+.+|+.||+.|.....|.
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~ 75 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRS 75 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHH
Confidence 346999999 4655 9999999999999999999985 67899999999998765543
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=96.03 E-value=0.0022 Score=57.29 Aligned_cols=51 Identities=24% Similarity=0.367 Sum_probs=42.6
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCC-----------HHHHHHHHHHHHHHHHHHH
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDD-----------QEAIAQVEAAYDMLLMRSL 129 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D-----------~~~~~~IEaAYD~Ilm~~L 129 (294)
.|.|+.||+.+.++.+||+++++++..++|+| ++++.+|..||+.+.....
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~ 443 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEM 443 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGG
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 37899999999999999999999988888765 2377899999999865433
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=81.01 E-value=0.64 Score=46.21 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=37.1
Q ss_pred chhhhhCCCCCCCH--HHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 022611 80 NALKLLGVSETASF--DEILRAKNSIVANCKDDQEAIAQVEAAYD 122 (294)
Q Consensus 80 dpYevLGVs~~AS~--eEIq~Ar~~l~~~y~~D~~~~~~IEaAYD 122 (294)
|+|++||++.++.. .+|++||+++.++.++++++.+-|+.|+.
T Consensus 630 ~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~~~r~~lvd~a~~ 674 (681)
T 2pzi_A 630 STNHILGFPFTSHGLRLGVEASLRSLARVAPTQRHRYTLVDMANK 674 (681)
T ss_dssp SSSEETTEESSHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCcccCCCCCChHHHHHHHHHHHHHHHHhCCChHHHHHHHHHhcc
Confidence 47899999777766 77999999999999999988888888874
No 37
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=54.32 E-value=21 Score=29.81 Aligned_cols=60 Identities=17% Similarity=0.281 Sum_probs=47.4
Q ss_pred CCCCccchhhhhCCCCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 022611 74 FEMSVENALKLLGVSETASFDEILRAKNSIVAN--CKDDQEAIAQVEAAYDMLLMRSLTQRRAGKVVDSS 141 (294)
Q Consensus 74 f~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~~--y~~D~~~~~~IEaAYD~Ilm~~L~~Rq~GKiv~~~ 141 (294)
++-+.-|-.|.||++.+ -++|++|.++ |.+|..--++.|-+.-+-+|++|. ..|..||..
T Consensus 66 WrtSIVDLmKlLglDsS------l~~RkeLA~eL~~~~~~~dSA~mNiwLHk~vm~kLa--~NGGkvP~~ 127 (130)
T 2gqb_A 66 WRTSIVDLMKALDIDSS------LSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV--ANGGKLPPE 127 (130)
T ss_dssp TTTCHHHHHHHTCCCCS------HHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG--GGSEECCTT
T ss_pred cHHHHHHHHHHhCCCcc------HHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH--HhCCCCChh
Confidence 56788999999999876 3578999888 567877778899999999999998 445444443
No 38
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=36.60 E-value=1e+02 Score=28.10 Aligned_cols=57 Identities=19% Similarity=0.158 Sum_probs=47.6
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 022611 79 ENALKLLGVSETASFDEILRAKNSIVANCKDDQEAIAQVEAAYDMLLMRSLTQRRAG 135 (294)
Q Consensus 79 ~dpYevLGVs~~AS~eEIq~Ar~~l~~~y~~D~~~~~~IEaAYD~Ilm~~L~~Rq~G 135 (294)
+++|+.||=.++-+.+-+.+--+..-++..+|.+...+.++--|..+|+=++.+++-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rd~~l~~~~~~~~~~ 316 (319)
T 2dpo_A 260 KRVLKSFGSIPEFSGATVEKVNQAMCKKVPADPEHLAARREWRDECLKRLAKLKRQM 316 (319)
T ss_dssp HHHHHTCCCCCCCCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 468899998888888887777777778888889999999999999999877776654
No 39
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=32.25 E-value=45 Score=32.68 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 022611 91 ASFDEILRAKNSIVANCKDDQEAIAQVEAAYDMLLMRSLTQRRAGK 136 (294)
Q Consensus 91 AS~eEIq~Ar~~l~~~y~~D~~~~~~IEaAYD~Ilm~~L~~Rq~GK 136 (294)
.+.+||++|++.+ |++..+.|+.||+.| .++.++|+-+
T Consensus 74 vs~~ei~~A~~~l------~~~~~~ai~~A~~~I--~~fh~~Q~~~ 111 (423)
T 4gic_A 74 LPRDVLEAAWQAL------PAEQAKALREAAERI--RAYAERQKLD 111 (423)
T ss_dssp ECHHHHHHHHHTS------CHHHHHHHHHHHHHH--HHHHHHHCCC
T ss_pred cCHHHHHHHHhhC------CHHHHHHHHHHHHHH--HHHHHhcccC
Confidence 4789999998876 888899999999999 5777777754
No 40
>4g1u_A Hemin transport system permease protein HMUU; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=32.21 E-value=1.2e+02 Score=28.54 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=25.1
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 022611 218 LASSFGASLYFMTRKNVKLGKAAVITIGGLVAGAVVGSAVE 258 (294)
Q Consensus 218 LAls~~a~iYfL~rK~k~lgRA~ll~~ggLv~G~llGs~l~ 258 (294)
-++.....+|++.+|.+. ...-+.+.|++++.+++++..
T Consensus 149 gal~a~~lv~~l~~~~~~--~~~~liL~Giavs~~~~a~~~ 187 (357)
T 4g1u_A 149 GSLAISTIIFTLSRWGHG--NLARLLLAGIAINALCGAAVG 187 (357)
T ss_dssp HHHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCC--ChHHHHHHHHHHHHHHHHHHH
Confidence 344445567888765322 345567788888888877663
No 41
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=30.76 E-value=50 Score=32.49 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 022611 90 TASFDEILRAKNSIVANCKDDQEAIAQVEAAYDMLLMRSLTQRRAGK 136 (294)
Q Consensus 90 ~AS~eEIq~Ar~~l~~~y~~D~~~~~~IEaAYD~Ilm~~L~~Rq~GK 136 (294)
.-|.+||++|++++ |++..+.|+.|++.| +++.++|+.+
T Consensus 67 ~Vs~~ei~~A~~~~------~~~~~~ai~~A~~nI--~~fH~~Q~~~ 105 (434)
T 1kae_A 67 KVSAEEIAAASERL------SDELKQAMAVAVKNI--ETFHTAQKLP 105 (434)
T ss_dssp BCCHHHHHHHHHHS------CHHHHHHHHHHHHHH--HHHHHTTCCC
T ss_pred ccCHHHHHHHHHhC------CHHHHHHHHHHHHHH--HHHHHHhcCC
Confidence 35889999998876 889999999999999 6777777664
No 42
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}
Probab=26.65 E-value=1.4e+02 Score=28.50 Aligned_cols=44 Identities=14% Similarity=0.022 Sum_probs=28.2
Q ss_pred CchHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 022611 212 DVPGLILASSFGASLYFMTRKNVKLGKAAVITIGGLVAGAVVGSA 256 (294)
Q Consensus 212 ~~p~L~LAls~~a~iYfL~rK~k~lgRA~ll~~ggLv~G~llGs~ 256 (294)
+.+.+.+++...+.+.+++++.|++.|... .+.|+++|+++..+
T Consensus 155 ~~~~~~la~~tl~iii~~~~~~kg~~~~~a-iLigivvg~~~a~~ 198 (429)
T 3qe7_A 155 DSKTIIISITTLAVTVLGSVLFRGFLAIIP-ILIGVLVGYALSFA 198 (429)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSSTTTTTHH-HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcccchhhH-HHHHHHHHHHHHHH
Confidence 346788888888888888887777655332 34445555555443
No 43
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=24.82 E-value=51 Score=26.95 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=11.1
Q ss_pred CCCCCC--CCCccchhhhhCCCCCCCHHHHHHHHHHHHH
Q 022611 69 DDSAPF--EMSVENALKLLGVSETASFDEILRAKNSIVA 105 (294)
Q Consensus 69 ~~~~pf--~m~~~dpYevLGVs~~AS~eEIq~Ar~~l~~ 105 (294)
+...-| .|+.+|||-.- .+||+++-+++-.
T Consensus 14 ~~~~~~~~~ms~~DPF~~V-------k~EVq~sl~~l~~ 45 (130)
T 4dnd_A 14 GTENLYFQSMSLEDPFFVV-------RGEVQKAVNTARG 45 (130)
T ss_dssp -------------CCHHHH-------HHHHHHHHHHHHH
T ss_pred CccceeeecCCCCCCcHHH-------HHHHHHHHHHHHH
Confidence 344455 67788998763 4666666444333
No 44
>2nq2_A Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=23.05 E-value=3e+02 Score=25.40 Aligned_cols=41 Identities=10% Similarity=0.189 Sum_probs=24.0
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 022611 216 LILASSFGASLYFMTRKNVKLGKAAVITIGGLVAGAVVGSAV 257 (294)
Q Consensus 216 L~LAls~~a~iYfL~rK~k~lgRA~ll~~ggLv~G~llGs~l 257 (294)
+.-++.....+|++.+|.++. ....+.+.|++++.+++++.
T Consensus 125 ~~gal~a~~lv~~l~~~~~~~-~~~~liL~Gia~s~~~~a~~ 165 (337)
T 2nq2_A 125 ILFGFGTLALVFLFSFKFNQR-SLLMLILIGMILSGLFSALV 165 (337)
T ss_dssp HHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 334455556778887643322 23455678888888887765
No 45
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=20.32 E-value=89 Score=25.54 Aligned_cols=16 Identities=13% Similarity=0.399 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHH
Q 022611 113 AIAQVEAAYDMLLMRS 128 (294)
Q Consensus 113 ~~~~IEaAYD~Ilm~~ 128 (294)
+...++.-||+++|.+
T Consensus 91 kkK~le~~~~kV~mNk 106 (115)
T 3vem_A 91 RTTKIEKDKNLVIMNK 106 (115)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555555544
Done!