BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022614
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 117 LPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILR 176
LP S AG+ FG G + + +G + + +G +L R GW+ K +
Sbjct: 35 LPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVG-RYLAR--GWVAKKIAGNQKFK 91
Query: 177 AAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYT 235
A E + V L R+SP FP+ + NY T+V Y +GSL GM+P + +Y
Sbjct: 92 AIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGSL-GMIPGTIMYVYI 150
Query: 236 GIL---IRTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQLK 283
G L + TL A+++ + Q + ++GF A+VA TI+ T A++ L
Sbjct: 151 GSLAGSLATLGTATNQAN--PTLQWTIRIVGFIATVAVTIYVTKIARKALN 199
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 91 WETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLP 150
W F +L LVF + FP LL S+ SM +AGM +G+ G++L+ A G
Sbjct: 92 WHGLKFGQGLLFTLVF--MVGFPPLLGFSALSM-LAGMVYGFVHGWILLACASISGSFCS 148
Query: 151 YFIGSHFLH----RIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYC 206
+ + + LH R+ +K+ + ILR + + F + L+R+ P PY + N
Sbjct: 149 FLVFRYLLHSRAERLMNSNKKFRAFSEILRE--DSSLF----ILVLLRLCPLPYSLSNGA 202
Query: 207 AVAT-HVKYGPYFLGSLVGMVPEIFVTIYTGILIRTLADAS--HEHHFLSAPQIILNVIG 263
A + YFL SL+ P++ + I+ G ++ L D + H + II + G
Sbjct: 203 LAAIPELPATTYFLASLI-TSPKLMIHIFVGHKLKELGDDTKGKSTHLIDILSII--ITG 259
Query: 264 FAASVAATIFFTVYAKRQLKI 284
AAS+ I +Y K Q K+
Sbjct: 260 AAASLTTYI---IYNKMQRKL 277
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 91 WETTTFSTPVLAVLVFASVALFPTLL------------------------LPSSPSMW-- 124
W + VLA L FAS+AL L + S P W
Sbjct: 119 WCRSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGY 178
Query: 125 -VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI-QGW----LEKYPKKAAILRAA 178
V + GY +GF+L M + VG+ + FI R+ W ++ K +A++R
Sbjct: 179 IVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVV 238
Query: 179 GEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGIL 238
G+ + VAL R++P P+ + N T + Y + S VG++P + Y G
Sbjct: 239 EGGS---GLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTT 295
Query: 239 IRTLADASHEH----HFLSAPQIILNV 261
+RT+ D E +F+ QII+++
Sbjct: 296 LRTMEDVIAEQSVSGYFVFCLQIIISI 322
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 39/207 (18%)
Query: 91 WETTTFSTPVLAVLVFASVALFPTLL------------------------LPSSPSMW-- 124
W + VLA L FAS+AL L + S P W
Sbjct: 120 WCRSLVLVCVLAALCFASLALVRRYLQHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGY 179
Query: 125 -VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI-QGW----LEKYPKKAAILRAA 178
V + GY +GF+L M + VG+ + FI R+ W ++ K +A++R
Sbjct: 180 IVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVV 239
Query: 179 GEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGIL 238
G+ + VAL R++P P+ + N T V Y + S G++P + Y G
Sbjct: 240 EGGS---GLKVVALARLTPIPFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTT 296
Query: 239 IRTLADASHEH----HFLSAPQIILNV 261
+RT+ D E +F+ QI++++
Sbjct: 297 LRTMEDVIAEQSLSGYFVFCLQIVISI 323
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 65 VGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMW 124
+G+L +F K++ ++ VI +W +L +LVF FP L+ S+ S+
Sbjct: 62 IGVLVLIFHKYL----IELLVIISDDWAKLPGGRLILFLLVF--FVGFPPLIGYSALSL- 114
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLH----RIQGWLEKYPKKAAILRAAGE 180
+AGM +G+ +G+ L+ SA G + + + +FL R+ EK+ A ILR +
Sbjct: 115 LAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEKFRAFAEILRE--D 172
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIR 240
+ F + LIR+ P PY + N A +LG+ V P++ + ++ G I+
Sbjct: 173 SSLF----LLVLIRLCPLPYSLSNGALAAIPELSAWVYLGASVITSPKMLIHLFVGHKIK 228
Query: 241 TLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQLKI 284
DA + I + V G AAS+ F +Y K Q K+
Sbjct: 229 EFGDAKTDTSTKIIDVISILVTGAAASLTT---FIIYRKMQQKL 269
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 71 VFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTF 130
VFI W+GP WE + + VL + VF FP L+ S+ ++G F
Sbjct: 103 VFI-WLGPVAE--------QWEQSVVAYTVLWLCVF--FVSFPPLVGWSTFGT-ISGYIF 150
Query: 131 GYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGEGNWFHQ 186
G G+ L SA +G + + + S F++R+ +++ A L+ G
Sbjct: 151 GVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTLKYDG------- 203
Query: 187 FRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFVTIYTGILIRTLADA 245
+ + +IR+ P PY + N AV+T P G +V P++ V + G IR L++
Sbjct: 204 LKLLCMIRLCPLPYSVCN-GAVSTFPTVQPLMYGLATAIVTPKLLVPAFVGSRIRLLSEK 262
Query: 246 SHEHHFLSAPQIILNVIGFAASVAATIF 273
E +SA +N+I +VA IF
Sbjct: 263 GEE---MSAGSKAVNIISIIVTVAIGIF 287
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSH-----FLHRIQGWLEKYPKKAAILRAAG 179
V+G FG G+LL SA +G S+ FI S F+HR+ +++ A L+ G
Sbjct: 147 VSGFIFGVWKGWLLYASATVLG-SICSFIASRTVLSKFVHRLVERDKRFAALALTLKYDG 205
Query: 180 EGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFVTIYTGIL 238
+ + +IR+ P PY I N A++T P G ++ P++ V + G
Sbjct: 206 -------LKLLCMIRLCPLPYSICN-GAISTFPTVQPLMYGLATAIISPKLLVPAFIGSR 257
Query: 239 IRTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQ 281
IR L + E +S ++N+ S+AA IF Y R+
Sbjct: 258 IRILNEKGEE---MSLGSKLINIFSIIVSIAAGIFTGWYIYRR 297
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 51 KVWYWVKL----AFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVF 106
K+ +W ++ AF L + LL F+ + G F+ + + WE + + VL + VF
Sbjct: 75 KMNFWQRVGAVAAFLLAN--LLGIGFLVFTGKVFIWLQPV-AAQWEHSPLAYGVLWLCVF 131
Query: 107 ASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQ 162
FP L+ S+ +AG FG G+LL SA +G + + + S F+HR+
Sbjct: 132 --FVSFPPLVGWSTFGT-MAGYIFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLM 188
Query: 163 GWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSL 222
+++ + L+ G + + +IR+ P PY + N AV+T P G
Sbjct: 189 ERDKRFAALSLTLKYDG-------LKLLCMIRLCPLPYSVCN-GAVSTFPTVQPLMYGLA 240
Query: 223 VGMV-PEIFVTIYTGILIRTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQ 281
++ P++ V + G +R L++ + E +SA +N+ S+ IF +Y R+
Sbjct: 241 TALISPKLLVPAFIGNRLRVLSENNEE---MSAGSKAVNICSIIVSICIGIFTGLYIYRR 297
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
+AG FG G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 IAGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFVTIYTGILI 239
+ + +IR+ P PY + N AV+T P G ++ P++ V + G I
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLVPAFIGSRI 258
Query: 240 RTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQ 281
R L++ + E +SA +N+ ++ IF Y R+
Sbjct: 259 RILSEKNEE---MSAGSKAVNICSIILTIGIGIFTGWYIYRR 297
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 30/233 (12%)
Query: 55 WVKLAFFLTSVGLLAAV---------FIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLV 105
W +L F+ VG + AV F+ + G F+ E + WE + + VL + V
Sbjct: 74 WRRLNFW-QRVGAIGAVILAILLGLGFMIFTGQVFLWLEPV-AETWEQSKLAFFVLWLCV 131
Query: 106 FASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRI 161
F FP L+ S+ VAG FG G+LL +A +G + + + S F++R+
Sbjct: 132 F--FVSFPPLVGWSTFGT-VAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRM 188
Query: 162 QGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGS 221
+++ A L+ G + + +IR+ P PY + N AV+T P G
Sbjct: 189 MERDKRFAALALTLKYDG-------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGL 240
Query: 222 LVGMV-PEIFVTIYTGILIRTLADASHEHHFLSAPQIILNVIGFAASVAATIF 273
++ P++ V + G IR L++ E +SA +N+ +++ +F
Sbjct: 241 ATAIITPKLLVPAFIGSRIRILSEQKGE---MSAGSKAVNICSIVLTISIGVF 290
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
++G +G G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 ISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFVTIYTGILI 239
+ + +IR+ P PY + N AV+T P G ++ P++ V + G I
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLVPAFIGSRI 258
Query: 240 RTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQ 281
R L++ + E +SA +N+ ++ +F Y R+
Sbjct: 259 RILSEKNEE---MSAASKAVNICSIILTIGIGVFTGWYIYRR 297
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
++G +G G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 ISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFVTIYTGILI 239
+ + +IR+ P PY + N AV+T P G ++ P++ V + G I
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLVPAFIGSRI 258
Query: 240 RTLADASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQ 281
R L++ + E +SA +N+ ++ +F Y R+
Sbjct: 259 RILSEKNEE---MSAASKAVNICSIILTIGIGVFTGWYIYRR 297
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 54 YWVKLAFFLTSV--GLLAAVFIKWVGPFFMDKEVIPII-NWETTTFSTPVLAVLVFASVA 110
+W ++ L ++ LL F+ + G F+ + P+ WE VL + VF
Sbjct: 79 FWQRIGAVLAAILANLLGIGFLVFTGKVFI--WLKPVAEQWEHNPLVFFVLWLCVF--FV 134
Query: 111 LFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLE 166
FP L+ S+ VAG FG G+LL SA +G + + + S F+HR+ +
Sbjct: 135 SFPPLVGWSTFGT-VAGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDK 193
Query: 167 KYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV 226
++ A L+ G + + +IR+ P PY + N AV+T P G ++
Sbjct: 194 RFAALALTLKYDG-------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLTYGLATAII 245
Query: 227 -PEIFVTIYTGILIRTLADASHE 248
P++ V + G +R L++ E
Sbjct: 246 TPKLLVPAFIGNRLRVLSEKGGE 268
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 103 VLVFASVALF-PTLLLPSSPSM-WVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHR 160
+L + S +F T ++P + M +AG FG GF+L++ G +F+
Sbjct: 112 ILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRP 171
Query: 161 IQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFL 219
+ WL +P+K +A + +RI+P P + N + + + +FL
Sbjct: 172 LVNWL--WPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFL 229
Query: 220 GSLVGMVPEIFVTIYTGILIRTLADASHEHHF 251
+LVG++P ++T+ G+ + L + F
Sbjct: 230 ATLVGLMPASYITVRAGLALGDLRSVKDLYDF 261
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWF 184
+AG FG G LL +VG + Y + S F ++ + +P K A+L+ E N
Sbjct: 94 LAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQLV--ISYFPDKVALLQKKVEENRN 151
Query: 185 HQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIRTLA 243
F + +R+ P P N A ++ +F L+G++P F+ + TG ++ TL
Sbjct: 152 SLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLT 211
Query: 244 D 244
Sbjct: 212 S 212
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWF 184
+AG FG G LL +VG + Y + S F ++ + +P K A+L+ E N
Sbjct: 94 LAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQLV--VSYFPDKVALLQRKVEENRN 151
Query: 185 HQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIRTLA 243
F + +R+ P P N A ++ +F L+G++P F+ + TG ++ TL
Sbjct: 152 SLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLT 211
Query: 244 D 244
Sbjct: 212 S 212
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 100 VLAVLVFASVALF-PTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFL 158
V A L+F +++ P +L P S G+ FG G L + ++ +F F
Sbjct: 43 VFAPLMFIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAAGLFS 102
Query: 159 HRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYF 218
+ G Y + AI + + +F+ F L+RI P + +Y A ++VK PYF
Sbjct: 103 AKKNG---HYERLEAIQKQMEDNGFFYIF----LLRILPINFDFVSYAAGLSNVKALPYF 155
Query: 219 LGSLVGMVP 227
+ VG++P
Sbjct: 156 AATAVGIIP 164
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 83 KEVIPIINWETTTFSTPVLAVLVFASVALFP-TLLLPSSPSMWV-AGMTFGYGFGFLLIM 140
KE+ ++ + T + VL L+F S L+ +P S + + AG FG FG LL
Sbjct: 69 KEMAELLQFYKTEHTGYVL--LLFCSAYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTC 126
Query: 141 SAVAVGISLPYFIGSHF-LHRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPF- 198
VG +L + + F H I ++ +P K A+L+ E N F + +R P
Sbjct: 127 VLTTVGATLCFLLSQAFGKHHI---VKLFPDKVAMLQKKVEENRSSLFFFLLFLRFFPMS 183
Query: 199 PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIRTLAD 244
P N + ++ +F+ +G++P F+ + TG ++ ++
Sbjct: 184 PNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQTGSMLSQISS 229
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 124 WVAGMTFGYGFGFLLIMSAVAVGIS----LPYFIGSHFLHRIQGWLEKYPKKAAILRAAG 179
+++G FG GF L+ +G + + Y+IG + + ++ +P K + +
Sbjct: 182 FLSGGLFGLKVGFPLVCFVATLGATFSYLISYYIGRNLVRKL------FPDKLKLFSDSL 235
Query: 180 EGNWFHQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGIL 238
+ + +RI+PF P N + V + +G+ +G++P F+ + GI
Sbjct: 236 SQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFAIGTFIGIMPATFLAVKAGIQ 295
Query: 239 IRTLADASH 247
I+ + + S
Sbjct: 296 IQNIQNPSD 304
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 104 LVFASVALFP-TLLLPSSPSMWV-AGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI 161
L+F S L+ + +P S + V AG FG G LL +VG + Y + S F ++
Sbjct: 71 LLFCSAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQL 130
Query: 162 QGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLG 220
+ +P K A+L+ E N F + +R+ P P N A ++ +F
Sbjct: 131 VVF--YFPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFS 188
Query: 221 SLVGMVPEIFVTIYTGILIRTLAD 244
L+G++P F+ + TG ++ TL
Sbjct: 189 VLIGLIPYNFICVQTGSILSTLTS 212
>sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1
Length = 319
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 53 WYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALF 112
W + LA +G+LA + + + +++ + N +STP++ V + VA F
Sbjct: 74 WQRILLAIGGGLIGILALLMLIFHNKIL--HKLVEMSNDLKEKWSTPIVLVTLIFFVA-F 130
Query: 113 PTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYF-IGSHFLH-RIQGWLEKYPK 170
P ++ S S G+ +G F +I++ AV S+ F + LH R + ++ +
Sbjct: 131 PPMIGFSLLST-TTGLIYGISFKGWVILAIGAVTGSICSFALFKTILHSRAEKLIQMNRR 189
Query: 171 KAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATH-VKYGPYFLGSLVGMVPEI 229
AA E N + +AL+R+ PFPY + N A + V + +G+++ P++
Sbjct: 190 FAAFASILQENN---SYWILALLRLCPFPYSLTNGAVGAVYGVSIKNFAIGNII-TTPKL 245
Query: 230 FVTIYTGILIRTLADA-SHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQLK 283
+ ++ G I+ + + S I+L V+ + F T +QL+
Sbjct: 246 LIYLFIGSRIKNMGETESSASKIFDLVSILLTVLALGLTAWVLYFKTQKRYQQLQ 300
>sp|Q6CXJ8|TVP38_KLULA Golgi apparatus membrane protein TVP38 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TVP38 PE=3 SV=1
Length = 305
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 98 TPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFG--FLLIMSAVAVGISLPYFIGS 155
TP++ +L+ +V+ FP L+ S S+ G+ +G F F+L MS V +G L + +
Sbjct: 112 TPLVLMLLILAVS-FPPLIGYSFLSL-STGLIYGLSFKGWFILAMSTV-IGSVLSFTVFQ 168
Query: 156 HFLHRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYN 204
LH L + K + + +GN + +ALIR+ PFPY N
Sbjct: 169 RLLHSHAERLIRMNPKLEAVSSVLQGN--DSYWMIALIRLCPFPYSFIN 215
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 115 LLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAI 174
LLLP S + G+ FG G LL + A + S + + + +L R L KY +
Sbjct: 61 LLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLL-ARWLGR--DLLLKYVGHSNT 117
Query: 175 LRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTI 233
+A +G + + L R+ P FPY I NY T + + PY L S + +P I I
Sbjct: 118 FQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGI--VI 175
Query: 234 YT 235
YT
Sbjct: 176 YT 177
>sp|A8NX72|TVP38_COPC7 Golgi apparatus membrane protein TVP38 OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=TVP38 PE=3 SV=1
Length = 294
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 100 VLAVLVFASVALFPTLLLPSSPSM-----WVAGMTFGYGF-GFLLIMSAVAVGISLPYFI 153
+LA F VAL +++ S P + V F YG GF + + +G +L + +
Sbjct: 69 LLAATRFGWVALLLSIICISFPPLIGHTTLVTLCGFAYGMKGFYIAFAGSILGSALVFVV 128
Query: 154 GSH-FLHRIQGWL---EKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVA 209
F +I+ W EK+ A++R+ G + LIR+SPFP +Y A
Sbjct: 129 LRFLFTEKIRSWSAQNEKWQALEAVVRSKG-------LPLIVLIRVSPFPPWVYANSLFA 181
Query: 210 THVKYGPY-FLGSLVGMVPEIFVTIYTGILIRTLADASHEHHFLSAPQIILNVIGFAASV 268
+ + F+ + + P++ + ++ G + L+D + +II N + A S+
Sbjct: 182 SIEPVKLWQFVAATCFITPKLLLYVFMGSKMAALSDGDQRDRMDTHDKII-NGLFLAGSL 240
Query: 269 AATIF 273
+F
Sbjct: 241 VIAVF 245
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 100 VLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLH 159
+ ++L+ A+ FP ++P + + G FG G + ++ +G L +F+ +
Sbjct: 38 LFSMLLIAADVFFP--IVPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARY--- 92
Query: 160 RIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYF 218
+ W K + +++ + F V L R+ P P ++ N + V++ +F
Sbjct: 93 SFRDWARKKVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFF 152
Query: 219 LGSLVGMVPEIFVTIYTG 236
SL+G +P I V G
Sbjct: 153 FASLIGKIPNIVVVTIAG 170
>sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=TVP38 PE=3 SV=1
Length = 307
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 126 AGMTFGYGFGFLLIMSAVAVGISLPYF-----IGSHFLHRIQGWLEKYPKKAAILRAAGE 180
AG+ +G F LI+S V S+ F + + R+ +K+ A+IL+
Sbjct: 138 AGLVYGVSFKGWLIISLGTVLGSIAAFSVFKTVFRSYAERLIRLNDKFEALASILQD--- 194
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIR 240
+ + +AL+R+ PFPY + N + F + V P++F+ ++ G ++
Sbjct: 195 ---HNSYWIIALLRLCPFPYSLTNGAIAGVYGISIRNFSIAQVLTTPKLFMYLFIGSRLK 251
Query: 241 TLADASHE-HHFLSAPQIILNVIGFAASVAATIFFTVYAKRQLKILQGEGE 290
L ++S I+ +I A+ A+I + +R L++ + +
Sbjct: 252 NLGESSSTATKLFDILSILFAIIALTAT--ASILYYKTKERYLELQRRNQD 300
>sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TVP38 PE=3 SV=1
Length = 323
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 126 AGMTFGYGFG--FLLIMSAVAVGISLPYFIGSHFLH-RIQGWLEKYPKKAAILRAAGEGN 182
G+ +G F F+L + +V ++ +++ + LH R + + + A E N
Sbjct: 148 TGLIYGVSFHGWFVLALGSVTGSVA-SFYVFKNLLHSRAEKLVHMNKRFEAFASILQEDN 206
Query: 183 WFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILIRTL 242
+ +AL+R+ PFPY + N + F + + P++ + ++ G I+ +
Sbjct: 207 ---SYLMLALLRLCPFPYSLTNGAIAGIYGISVKNFTIANIITTPKLLIYLFIGARIKNM 263
Query: 243 A-DASHEHHFLSAPQIILNVIGFAASVAATIFFTVYAKRQLK 283
A D S I++ +I F + F T QLK
Sbjct: 264 AEDHSTSSRIFDLVSILITLIIFTLTAWLLYFKTKQRYAQLK 305
>sp|Q6NV38|T41AB_DANRE Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1
Length = 278
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWF 184
++G FG G ++ + VG + Y + F R + +P+K A+L+ E N
Sbjct: 105 LSGALFGPLHGLIIACTLTTVGSTNCYLLSRTFGKR--HIVRLFPEKVAMLQRMVEENRS 162
Query: 185 HQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYTGILI 239
F + +R P P N + ++ +F L+G++P F+ ++TG ++
Sbjct: 163 SLFFFLLFLRFFPMTPNWFLNVTSPILNIPIPIFFFSILIGLIPYNFICVHTGAVL 218
>sp|P36684|Y703_HAESO Uncharacterized protein HI0703 homolog OS=Haemophilus somnus PE=4
SV=1
Length = 191
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 89 INWETTTFSTPVLAVLVFASVALFP----TLLLPSSPSMWVAGMTFGYGFGFLLIMSAVA 144
+ W F+T L + F FP +L+P S + F F M++ A
Sbjct: 12 MQWANHRFATFWLTFVSFIEAIFFPIPPDVMLIPMS----INKPKCATKFAFYAAMAS-A 66
Query: 145 VGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWFHQFR--TVALIRISPFPYII 202
+G ++ Y +G + IQ +++++ + A +WF ++ V + SP PY I
Sbjct: 67 IGGAIGYGLGYYAFDFIQSYIQQWGYQQHWETAL---SWFKEWGIWVVFVAGFSPIPYKI 123
Query: 203 YNYCAVATHVKYGPYFLGSLVGMVPE 228
+ CA + + P+ L + + +
Sbjct: 124 FTICAGVMQMAFLPFLLTAFISRIAR 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,171,493
Number of Sequences: 539616
Number of extensions: 5155711
Number of successful extensions: 15305
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 15278
Number of HSP's gapped (non-prelim): 51
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)