CCB4 protein (Arabidopsis thaliana)

STRING 9.05

CCB4 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	CCB4	CCB4 (COFACTOR ASSEMBLY OF COMPLEX C); COFACTOR ASSEMBLY OF COMPLEX C (CCB4); FUNCTIONS IN- molecular_function unknown; INVOLVED IN- cytochrome b6f complex assembly; LOCATED IN- chloroplast; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; Has 218 Blast hits to 218 proteins in 60 species- Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 95 (source- NCBI BLink). (297 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	CCB1	CCB1 (COFACTOR ASSEMBLY OF COMPLEX C); COFACTOR ASSEMBLY OF COMPLEX C (CCB1); FUNCTIONS IN- mol [...] (267 aa)			•	•	0.968
	AT5G21920	YGGT family protein; YGGT family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN [...] (251 aa)			•	•	0.948
	AT4G27990	YGGT family protein; YGGT family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN [...] (218 aa)				•	0.923
	emb1990	emb1990 (embryo defective 1990); embryo defective 1990 (emb1990); FUNCTIONS IN- molecular_funct [...] (232 aa)			•	•	0.884
	AT5G52970	thylakoid lumen 15.0 kDa protein; thylakoid lumen 15.0 kDa protein; FUNCTIONS IN- molecular_fun [...] (223 aa)		•	•		0.821
	PPL1	PPL1 (PsbP-like protein 1); calcium ion binding; PsbP-like protein 1 (PPL1); FUNCTIONS IN- calc [...] (230 aa)		•	•		0.812
	AT1G49380	cytochrome c biogenesis protein family; cytochrome c biogenesis protein family; FUNCTIONS IN- m [...] (547 aa)	•	•	•	•	0.790
	AT5G27560	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (341 aa)		•	•		0.778
	AT1G14345	oxidoreductase; oxidoreductase; FUNCTIONS IN- oxidoreductase activity; INVOLVED IN- oxidation r [...] (196 aa)		•	•		0.761
	CRR6	CRR6 (chlororespiratory reduction 6); Encodes a chloroplast thylakoid membrane protein. Require [...] (246 aa)		•	•		0.719

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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